Query 005880
Match_columns 672
No_of_seqs 870 out of 5630
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 15:06:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005880.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005880hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 9.1E-61 2E-65 572.5 41.5 516 65-646 428-956 (968)
2 KOG1187 Serine/threonine prote 100.0 2E-53 4.4E-58 444.4 27.6 282 351-644 61-355 (361)
3 KOG0192 Tyrosine kinase specif 100.0 1.8E-47 3.9E-52 396.5 27.9 252 363-643 44-305 (362)
4 KOG0581 Mitogen-activated prot 100.0 1.5E-46 3.4E-51 370.1 20.5 253 355-636 76-334 (364)
5 KOG0197 Tyrosine kinases [Sign 100.0 5.8E-46 1.3E-50 382.9 20.5 257 355-644 201-464 (468)
6 KOG0615 Serine/threonine prote 100.0 2.9E-46 6.4E-51 370.0 14.6 245 364-636 176-436 (475)
7 KOG0595 Serine/threonine-prote 100.0 6.4E-45 1.4E-49 361.3 21.1 189 366-565 16-217 (429)
8 KOG0575 Polo-like serine/threo 100.0 1.9E-44 4.2E-49 375.0 21.9 238 364-636 22-268 (592)
9 KOG1026 Nerve growth factor re 100.0 1.9E-44 4.1E-49 389.3 19.8 252 363-643 489-764 (774)
10 KOG0591 NIMA (never in mitosis 100.0 8.6E-45 1.9E-49 342.4 12.2 253 363-640 22-284 (375)
11 KOG0661 MAPK related serine/th 100.0 1.5E-43 3.3E-48 356.6 13.7 263 361-637 11-291 (538)
12 KOG0593 Predicted protein kina 100.0 1.9E-43 4.2E-48 336.5 13.0 262 364-636 6-283 (396)
13 KOG3653 Transforming growth fa 100.0 2.5E-41 5.5E-46 340.3 26.4 282 365-661 215-523 (534)
14 KOG0582 Ste20-like serine/thre 100.0 6E-42 1.3E-46 342.6 20.2 250 363-636 29-292 (516)
15 KOG0659 Cdk activating kinase 100.0 2.7E-42 5.8E-47 323.6 14.7 266 362-637 4-281 (318)
16 PHA02988 hypothetical protein; 100.0 3E-41 6.6E-46 346.6 23.7 261 351-643 11-281 (283)
17 KOG0196 Tyrosine kinase, EPH ( 100.0 3.4E-42 7.4E-47 363.9 14.4 251 365-648 634-898 (996)
18 KOG0600 Cdc2-related protein k 100.0 1E-41 2.2E-46 346.0 17.2 259 365-636 122-399 (560)
19 KOG0598 Ribosomal protein S6 k 100.0 1.5E-41 3.3E-46 334.8 17.7 232 364-629 29-269 (357)
20 KOG0578 p21-activated serine/t 100.0 5.6E-42 1.2E-46 353.9 15.1 239 365-636 278-522 (550)
21 KOG0198 MEKK and related serin 100.0 1.9E-41 4.2E-46 340.7 18.3 248 363-640 20-279 (313)
22 KOG0193 Serine/threonine prote 100.0 5.8E-42 1.3E-46 354.5 14.6 251 363-643 395-655 (678)
23 KOG1095 Protein tyrosine kinas 100.0 1.9E-41 4.1E-46 379.0 19.2 256 364-648 696-968 (1025)
24 KOG1094 Discoidin domain recep 100.0 1.6E-40 3.4E-45 340.8 19.7 255 363-642 541-805 (807)
25 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.4E-40 9.6E-45 347.3 22.3 253 363-643 10-336 (338)
26 KOG2052 Activin A type IB rece 100.0 5.6E-40 1.2E-44 328.3 20.5 257 365-643 216-505 (513)
27 KOG4721 Serine/threonine prote 100.0 6.1E-41 1.3E-45 342.4 13.8 235 366-641 130-368 (904)
28 KOG0592 3-phosphoinositide-dep 100.0 1.4E-40 2.9E-45 340.4 16.3 239 364-637 77-338 (604)
29 KOG1989 ARK protein kinase fam 100.0 3.6E-40 7.9E-45 358.0 18.7 257 362-649 39-319 (738)
30 KOG0583 Serine/threonine prote 100.0 1.7E-39 3.8E-44 340.3 22.1 246 365-643 22-280 (370)
31 KOG0597 Serine-threonine prote 100.0 3.3E-40 7.2E-45 337.3 15.5 238 363-636 5-250 (808)
32 KOG0194 Protein tyrosine kinas 100.0 5.3E-40 1.1E-44 344.6 17.5 252 364-647 161-426 (474)
33 KOG2345 Serine/threonine prote 100.0 2.2E-40 4.8E-45 307.7 12.2 255 364-642 25-301 (302)
34 KOG0663 Protein kinase PITSLRE 100.0 2.8E-39 6.1E-44 312.1 19.2 194 364-567 80-283 (419)
35 cd05096 PTKc_DDR1 Catalytic do 100.0 1.1E-38 2.3E-43 331.6 23.8 255 364-640 9-304 (304)
36 cd05064 PTKc_EphR_A10 Catalyti 100.0 2E-38 4.4E-43 322.9 22.9 246 363-641 8-265 (266)
37 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.1E-38 6.7E-43 319.6 23.8 240 365-638 9-255 (256)
38 cd05104 PTKc_Kit Catalytic dom 100.0 1.8E-38 3.9E-43 339.1 22.7 251 363-641 38-374 (375)
39 KOG0588 Serine/threonine prote 100.0 4.2E-39 9.2E-44 335.9 17.0 239 365-637 17-263 (786)
40 KOG0580 Serine/threonine prote 100.0 2.4E-39 5.2E-44 299.6 12.5 249 353-636 17-272 (281)
41 cd05571 STKc_PKB Catalytic dom 100.0 1.1E-38 2.4E-43 334.1 19.2 236 366-636 1-250 (323)
42 KOG0585 Ca2+/calmodulin-depend 100.0 6.8E-39 1.5E-43 322.5 16.6 243 364-637 101-372 (576)
43 cd05048 PTKc_Ror Catalytic Dom 100.0 6.7E-38 1.5E-42 322.0 24.3 249 363-640 8-282 (283)
44 cd05106 PTKc_CSF-1R Catalytic 100.0 2.3E-38 5.1E-43 337.8 21.7 253 362-642 40-373 (374)
45 PF07714 Pkinase_Tyr: Protein 100.0 8.5E-39 1.9E-43 324.2 16.7 242 365-638 4-259 (259)
46 cd05631 STKc_GRK4 Catalytic do 100.0 3.6E-38 7.8E-43 324.4 21.6 243 365-636 5-260 (285)
47 KOG0616 cAMP-dependent protein 100.0 1.8E-38 3.9E-43 302.1 17.5 237 355-628 41-283 (355)
48 cd05148 PTKc_Srm_Brk Catalytic 100.0 7.9E-38 1.7E-42 317.5 23.5 248 362-641 8-261 (261)
49 cd05585 STKc_YPK1_like Catalyt 100.0 1.9E-38 4.1E-43 330.8 19.3 234 368-636 1-243 (312)
50 cd05072 PTKc_Lyn Catalytic dom 100.0 5.2E-38 1.1E-42 318.8 22.1 245 364-641 10-261 (261)
51 KOG4257 Focal adhesion tyrosin 100.0 3.8E-38 8.3E-43 325.0 20.6 258 352-643 381-651 (974)
52 PLN00034 mitogen-activated pro 100.0 6E-38 1.3E-42 332.8 22.9 240 364-636 78-327 (353)
53 KOG0201 Serine/threonine prote 100.0 1.1E-39 2.4E-44 326.4 8.8 238 365-636 18-262 (467)
54 cd05068 PTKc_Frk_like Catalyti 100.0 9.8E-38 2.1E-42 316.9 23.1 245 364-641 10-261 (261)
55 cd05612 STKc_PRKX_like Catalyt 100.0 1.8E-38 3.8E-43 327.7 17.6 237 364-635 5-252 (291)
56 cd05052 PTKc_Abl Catalytic dom 100.0 1.2E-37 2.6E-42 316.6 23.3 245 364-641 10-262 (263)
57 cd05105 PTKc_PDGFR_alpha Catal 100.0 9.4E-38 2E-42 334.6 23.4 262 354-643 31-399 (400)
58 cd05595 STKc_PKB_beta Catalyti 100.0 4.7E-38 1E-42 329.4 20.5 236 366-636 1-250 (323)
59 KOG0658 Glycogen synthase kina 100.0 2.6E-39 5.7E-44 318.2 10.3 259 365-642 29-313 (364)
60 cd06649 PKc_MEK2 Catalytic dom 100.0 1.2E-37 2.5E-42 327.6 23.4 191 364-564 9-204 (331)
61 KOG4278 Protein tyrosine kinas 100.0 8.2E-39 1.8E-43 329.3 14.1 257 353-642 260-524 (1157)
62 KOG0660 Mitogen-activated prot 100.0 3.1E-38 6.8E-43 310.0 17.4 270 365-648 27-323 (359)
63 cd05093 PTKc_TrkB Catalytic do 100.0 1.7E-37 3.7E-42 319.9 23.7 252 364-644 9-282 (288)
64 cd05593 STKc_PKB_gamma Catalyt 100.0 5.5E-38 1.2E-42 329.4 20.2 237 366-637 1-251 (328)
65 PTZ00263 protein kinase A cata 100.0 2.9E-38 6.3E-43 331.8 18.1 239 363-636 21-270 (329)
66 cd05049 PTKc_Trk Catalytic dom 100.0 2.6E-37 5.6E-42 317.1 24.0 248 363-639 8-279 (280)
67 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.6E-38 9.9E-43 324.2 18.4 250 365-636 10-284 (288)
68 KOG0611 Predicted serine/threo 100.0 2.9E-38 6.3E-43 311.0 16.0 241 362-637 55-303 (668)
69 cd05084 PTKc_Fes Catalytic dom 100.0 4E-37 8.7E-42 310.6 24.2 241 366-639 1-251 (252)
70 KOG0033 Ca2+/calmodulin-depend 100.0 2.1E-39 4.5E-44 300.0 6.8 244 362-636 13-266 (355)
71 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3E-37 6.4E-42 312.4 23.2 242 364-639 8-256 (256)
72 cd08228 STKc_Nek6 Catalytic do 100.0 4.4E-37 9.6E-42 313.1 24.6 251 365-642 7-266 (267)
73 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.2E-37 2.6E-42 327.9 21.0 246 365-637 6-257 (333)
74 cd05094 PTKc_TrkC Catalytic do 100.0 4.6E-37 1E-41 317.2 24.9 250 365-643 10-284 (291)
75 PTZ00267 NIMA-related protein 100.0 2.5E-37 5.3E-42 340.2 24.1 243 364-636 71-322 (478)
76 cd06650 PKc_MEK1 Catalytic dom 100.0 2.9E-37 6.4E-42 324.6 23.6 193 363-565 8-205 (333)
77 KOG0605 NDR and related serine 100.0 1.4E-37 3.1E-42 318.7 20.4 235 364-630 145-435 (550)
78 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.9E-37 4E-42 327.3 21.9 263 364-637 4-290 (338)
79 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.2E-37 4.8E-42 318.4 21.7 258 364-641 8-283 (284)
80 cd05108 PTKc_EGFR Catalytic do 100.0 3.2E-37 7E-42 322.3 23.2 248 364-645 11-272 (316)
81 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.7E-37 5.8E-42 313.9 21.8 239 366-638 1-261 (262)
82 KOG0594 Protein kinase PCTAIRE 100.0 6.7E-38 1.4E-42 309.1 16.6 265 364-637 15-302 (323)
83 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2E-37 4.4E-42 321.8 21.1 190 365-564 10-206 (303)
84 cd05584 STKc_p70S6K Catalytic 100.0 1.6E-37 3.6E-42 325.3 20.5 236 366-636 2-255 (323)
85 KOG0589 Serine/threonine prote 100.0 4.4E-38 9.6E-43 323.8 15.6 243 364-638 8-259 (426)
86 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.8E-37 6.1E-42 315.8 21.4 238 367-638 2-273 (274)
87 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.6E-37 1.6E-41 310.1 24.3 245 362-640 8-259 (260)
88 cd05059 PTKc_Tec_like Catalyti 100.0 6.1E-37 1.3E-41 310.1 23.5 242 363-638 7-255 (256)
89 cd05033 PTKc_EphR Catalytic do 100.0 7.6E-37 1.6E-41 311.3 24.1 245 364-641 8-265 (266)
90 cd05071 PTKc_Src Catalytic dom 100.0 8.1E-37 1.8E-41 310.4 24.3 245 363-641 9-260 (262)
91 cd05090 PTKc_Ror1 Catalytic do 100.0 7.4E-37 1.6E-41 314.4 23.9 248 364-640 9-282 (283)
92 cd06646 STKc_MAP4K5 Catalytic 100.0 3E-37 6.5E-42 314.4 20.8 246 364-637 13-265 (267)
93 cd07848 STKc_CDKL5 Catalytic d 100.0 1.6E-37 3.5E-42 319.9 18.8 262 364-636 5-283 (287)
94 cd05101 PTKc_FGFR2 Catalytic d 100.0 7.7E-37 1.7E-41 317.6 23.8 263 355-646 10-301 (304)
95 cd05091 PTKc_Ror2 Catalytic do 100.0 9.8E-37 2.1E-41 313.4 24.4 249 363-640 8-282 (283)
96 cd05107 PTKc_PDGFR_beta Cataly 100.0 1E-36 2.2E-41 326.4 25.5 260 355-642 32-400 (401)
97 cd05054 PTKc_VEGFR Catalytic d 100.0 6.1E-37 1.3E-41 322.5 23.3 254 362-643 9-335 (337)
98 cd05062 PTKc_IGF-1R Catalytic 100.0 6.6E-37 1.4E-41 313.7 22.8 248 364-640 10-277 (277)
99 cd05075 PTKc_Axl Catalytic dom 100.0 9.9E-37 2.1E-41 311.4 23.9 249 364-641 3-271 (272)
100 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.8E-37 1E-41 313.3 21.4 250 367-639 2-268 (269)
101 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.1E-37 8.9E-42 316.2 21.0 256 364-642 8-282 (283)
102 cd05085 PTKc_Fer Catalytic dom 100.0 1.4E-36 3E-41 306.2 24.3 241 366-639 1-249 (250)
103 cd05594 STKc_PKB_alpha Catalyt 100.0 1.1E-37 2.4E-42 327.0 16.9 236 366-636 1-251 (325)
104 cd05045 PTKc_RET Catalytic dom 100.0 1.1E-36 2.4E-41 314.2 24.0 251 364-643 4-288 (290)
105 cd05042 PTKc_Aatyk Catalytic d 100.0 9.2E-37 2E-41 311.2 23.0 250 367-639 2-268 (269)
106 cd05047 PTKc_Tie Catalytic dom 100.0 1.5E-36 3.3E-41 309.8 24.5 248 366-642 1-269 (270)
107 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.6E-36 3.4E-41 308.9 24.6 251 365-642 7-266 (267)
108 cd05590 STKc_nPKC_eta Catalyti 100.0 3E-37 6.5E-42 322.8 19.5 232 366-632 1-242 (320)
109 cd08229 STKc_Nek7 Catalytic do 100.0 1.1E-36 2.4E-41 310.2 23.1 252 364-642 6-266 (267)
110 PHA03212 serine/threonine kina 100.0 9.4E-37 2E-41 326.7 23.4 250 364-636 96-375 (391)
111 PTZ00426 cAMP-dependent protei 100.0 2.4E-37 5.2E-42 325.7 18.5 240 363-637 33-284 (340)
112 cd05591 STKc_nPKC_epsilon Cata 100.0 2.8E-37 6.1E-42 323.3 18.9 236 366-636 1-253 (321)
113 cd05092 PTKc_TrkA Catalytic do 100.0 1E-36 2.2E-41 312.9 22.6 247 364-639 9-279 (280)
114 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.5E-36 3.2E-41 309.4 23.7 245 364-641 9-267 (268)
115 cd05115 PTKc_Zap-70 Catalytic 100.0 1.8E-36 3.8E-41 306.9 24.1 241 367-641 2-255 (257)
116 cd05608 STKc_GRK1 Catalytic do 100.0 6.9E-37 1.5E-41 314.0 21.4 242 368-636 1-256 (280)
117 cd05607 STKc_GRK7 Catalytic do 100.0 6.4E-37 1.4E-41 313.7 21.1 244 368-639 1-252 (277)
118 KOG4279 Serine/threonine prote 100.0 5.8E-38 1.3E-42 326.7 13.3 241 367-636 582-831 (1226)
119 cd05111 PTK_HER3 Pseudokinase 100.0 2.4E-36 5.2E-41 309.9 25.2 246 364-643 11-270 (279)
120 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.2E-36 2.7E-41 308.6 22.8 244 363-640 9-259 (260)
121 cd05589 STKc_PKN Catalytic dom 100.0 4.3E-37 9.2E-42 322.4 19.8 236 365-636 4-256 (324)
122 cd05069 PTKc_Yes Catalytic dom 100.0 2.1E-36 4.6E-41 306.9 24.3 243 364-640 10-259 (260)
123 KOG0667 Dual-specificity tyros 100.0 1.6E-37 3.5E-42 327.1 16.6 195 364-569 190-395 (586)
124 cd05053 PTKc_FGFR Catalytic do 100.0 8.5E-37 1.8E-41 315.5 21.7 251 363-642 15-292 (293)
125 cd05082 PTKc_Csk Catalytic dom 100.0 1.3E-36 2.8E-41 307.7 22.4 244 363-641 9-256 (256)
126 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.5E-36 3.2E-41 315.9 23.4 254 362-644 20-302 (307)
127 cd05089 PTKc_Tie1 Catalytic do 100.0 1.5E-36 3.3E-41 314.3 23.4 255 364-647 6-281 (297)
128 cd05039 PTKc_Csk_like Catalyti 100.0 2.1E-36 4.5E-41 306.2 23.8 244 364-641 10-256 (256)
129 cd05043 PTK_Ryk Pseudokinase d 100.0 1.4E-36 3.1E-41 311.7 23.0 251 364-643 10-278 (280)
130 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.6E-36 3.5E-41 307.3 23.1 239 366-639 1-259 (259)
131 cd06643 STKc_SLK Catalytic dom 100.0 4E-36 8.7E-41 308.7 26.2 246 362-636 7-261 (282)
132 cd05116 PTKc_Syk Catalytic dom 100.0 2E-36 4.4E-41 306.5 23.6 240 367-641 2-255 (257)
133 cd05592 STKc_nPKC_theta_delta 100.0 6.5E-37 1.4E-41 319.7 20.5 235 366-635 1-246 (316)
134 cd05582 STKc_RSK_N N-terminal 100.0 1.1E-37 2.4E-42 326.0 14.7 233 366-633 2-245 (318)
135 cd05618 STKc_aPKC_iota Catalyt 100.0 5.5E-37 1.2E-41 322.0 19.9 240 366-631 1-250 (329)
136 cd05035 PTKc_Axl_like Catalyti 100.0 2E-36 4.3E-41 309.2 23.5 249 364-641 3-272 (273)
137 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.3E-36 7.1E-41 317.1 25.7 263 354-645 6-297 (334)
138 cd05058 PTKc_Met_Ron Catalytic 100.0 3.1E-36 6.8E-41 305.9 24.6 245 366-643 1-261 (262)
139 cd05060 PTKc_Syk_like Catalyti 100.0 2.7E-36 5.9E-41 305.5 23.9 242 366-642 1-256 (257)
140 cd05588 STKc_aPKC Catalytic do 100.0 6.2E-37 1.4E-41 321.7 19.9 244 366-635 1-260 (329)
141 cd07868 STKc_CDK8 Catalytic do 100.0 2.2E-36 4.7E-41 316.2 23.9 194 365-566 6-220 (317)
142 KOG0574 STE20-like serine/thre 100.0 9.7E-39 2.1E-43 303.3 5.4 240 364-636 37-282 (502)
143 cd05040 PTKc_Ack_like Catalyti 100.0 8.7E-37 1.9E-41 309.0 20.1 242 366-639 1-256 (257)
144 cd08227 PK_STRAD_alpha Pseudok 100.0 2.2E-36 4.7E-41 317.5 23.7 193 365-564 3-212 (327)
145 cd05034 PTKc_Src_like Catalyti 100.0 2.4E-36 5.3E-41 306.5 23.2 244 364-640 10-260 (261)
146 cd05596 STKc_ROCK Catalytic do 100.0 6.6E-37 1.4E-41 326.4 19.9 244 364-637 47-304 (370)
147 cd05619 STKc_nPKC_theta Cataly 100.0 1.1E-36 2.5E-41 317.7 21.2 235 366-635 1-246 (316)
148 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-37 3.2E-42 326.9 14.4 244 364-636 5-262 (330)
149 cd05088 PTKc_Tie2 Catalytic do 100.0 1.8E-36 3.9E-41 314.6 22.2 254 364-646 11-285 (303)
150 PTZ00283 serine/threonine prot 100.0 9.7E-37 2.1E-41 335.6 21.3 243 365-637 37-297 (496)
151 cd05097 PTKc_DDR_like Catalyti 100.0 2.3E-36 5E-41 312.6 22.9 255 364-640 9-295 (295)
152 cd06654 STKc_PAK1 Catalytic do 100.0 1.5E-36 3.1E-41 314.2 21.3 239 365-636 25-269 (296)
153 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 9.3E-37 2E-41 309.2 19.3 240 366-639 1-258 (258)
154 cd05570 STKc_PKC Catalytic dom 100.0 1E-36 2.2E-41 318.6 20.1 236 366-636 1-251 (318)
155 cd05628 STKc_NDR1 Catalytic do 100.0 1.6E-36 3.4E-41 323.1 21.9 190 365-565 6-239 (363)
156 cd05575 STKc_SGK Catalytic dom 100.0 5.7E-37 1.2E-41 321.3 18.2 232 366-632 1-242 (323)
157 cd05061 PTKc_InsR Catalytic do 100.0 4E-36 8.6E-41 309.7 24.2 251 363-642 9-279 (288)
158 cd06645 STKc_MAP4K3 Catalytic 100.0 2.1E-36 4.6E-41 308.1 21.9 246 363-636 12-264 (267)
159 cd05605 STKc_GRK4_like Catalyt 100.0 1.3E-36 2.8E-41 312.9 20.4 243 365-636 5-260 (285)
160 cd05614 STKc_MSK2_N N-terminal 100.0 6E-37 1.3E-41 322.5 18.3 243 364-636 4-266 (332)
161 cd07862 STKc_CDK6 Catalytic do 100.0 1.2E-36 2.6E-41 313.9 20.2 251 364-636 5-286 (290)
162 cd06644 STKc_STK10_LOK Catalyt 100.0 3.7E-36 8.1E-41 310.6 23.8 245 363-636 15-268 (292)
163 cd05620 STKc_nPKC_delta Cataly 100.0 1.1E-36 2.3E-41 318.1 19.8 235 366-635 1-246 (316)
164 cd05112 PTKc_Itk Catalytic dom 100.0 3.7E-36 7.9E-41 304.3 23.0 241 364-638 8-255 (256)
165 cd08529 STKc_FA2-like Catalyti 100.0 3.4E-36 7.4E-41 304.3 22.6 240 365-636 5-252 (256)
166 cd05032 PTKc_InsR_like Catalyt 100.0 2.1E-36 4.5E-41 309.9 21.2 248 363-639 9-276 (277)
167 KOG0694 Serine/threonine prote 100.0 8.5E-37 1.8E-41 321.5 18.3 240 354-631 364-613 (694)
168 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.1E-36 8.9E-41 309.0 23.2 259 362-641 6-283 (284)
169 cd05051 PTKc_DDR Catalytic dom 100.0 3E-36 6.4E-41 311.9 22.1 254 364-639 9-295 (296)
170 cd00192 PTKc Catalytic domain 100.0 5.5E-36 1.2E-40 303.5 23.6 245 366-639 1-262 (262)
171 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.6E-36 3.5E-41 318.3 20.3 239 366-632 1-249 (327)
172 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.9E-36 1.1E-40 307.2 23.4 247 364-639 10-276 (277)
173 cd05055 PTKc_PDGFR Catalytic d 100.0 4.9E-36 1.1E-40 311.1 23.6 248 363-641 38-301 (302)
174 cd05621 STKc_ROCK2 Catalytic d 100.0 8.6E-37 1.9E-41 325.1 18.3 244 364-637 47-304 (370)
175 cd05109 PTKc_HER2 Catalytic do 100.0 7.3E-36 1.6E-40 306.3 24.5 247 365-645 12-272 (279)
176 cd05626 STKc_LATS2 Catalytic d 100.0 1.6E-36 3.5E-41 325.1 20.4 242 365-637 6-305 (381)
177 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.1E-37 1.3E-41 325.0 17.0 241 365-637 6-285 (350)
178 cd06624 STKc_ASK Catalytic dom 100.0 5.3E-36 1.2E-40 305.4 23.2 242 366-636 14-264 (268)
179 cd06619 PKc_MKK5 Catalytic dom 100.0 6.3E-36 1.4E-40 306.8 23.9 244 364-637 5-253 (279)
180 KOG0577 Serine/threonine prote 100.0 1.2E-37 2.7E-42 319.4 11.1 240 366-636 32-277 (948)
181 cd05604 STKc_SGK3 Catalytic do 100.0 6.5E-37 1.4E-41 321.2 16.8 237 366-637 1-247 (325)
182 PRK13184 pknD serine/threonine 100.0 2.3E-36 4.9E-41 341.1 22.1 255 365-646 7-295 (932)
183 cd05050 PTKc_Musk Catalytic do 100.0 3.4E-36 7.5E-41 310.2 21.7 248 364-640 9-288 (288)
184 cd05066 PTKc_EphR_A Catalytic 100.0 5.4E-36 1.2E-40 305.2 22.9 245 364-641 8-266 (267)
185 cd05086 PTKc_Aatyk2 Catalytic 100.0 6.5E-36 1.4E-40 304.8 23.2 249 367-639 2-267 (268)
186 cd05056 PTKc_FAK Catalytic dom 100.0 6E-36 1.3E-40 305.3 23.0 247 364-644 10-268 (270)
187 cd05095 PTKc_DDR2 Catalytic do 100.0 5.4E-36 1.2E-40 310.0 22.9 255 364-640 9-296 (296)
188 KOG0599 Phosphorylase kinase g 100.0 3.1E-37 6.7E-42 289.7 12.2 243 365-636 22-282 (411)
189 PTZ00036 glycogen synthase kin 100.0 1.4E-36 3E-41 330.4 19.2 258 364-642 70-358 (440)
190 cd05599 STKc_NDR_like Catalyti 100.0 7.3E-37 1.6E-41 326.2 16.6 240 365-636 6-295 (364)
191 cd05602 STKc_SGK1 Catalytic do 100.0 1.1E-36 2.5E-41 319.3 17.8 236 366-636 1-246 (325)
192 cd05587 STKc_cPKC Catalytic do 100.0 2E-36 4.4E-41 317.2 19.7 233 364-631 4-246 (324)
193 cd06656 STKc_PAK3 Catalytic do 100.0 3.9E-36 8.4E-41 311.2 21.5 240 364-636 23-268 (297)
194 cd05099 PTKc_FGFR4 Catalytic d 100.0 8.2E-36 1.8E-40 311.3 24.1 253 362-643 14-295 (314)
195 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.9E-36 1.3E-40 316.1 23.1 254 362-643 9-341 (343)
196 cd06637 STKc_TNIK Catalytic do 100.0 1E-35 2.2E-40 304.0 23.8 243 364-636 10-268 (272)
197 cd05041 PTKc_Fes_like Catalyti 100.0 1.1E-35 2.5E-40 299.7 23.9 241 366-639 1-250 (251)
198 cd05065 PTKc_EphR_B Catalytic 100.0 8.3E-36 1.8E-40 304.1 23.1 245 364-641 8-268 (269)
199 cd07853 STKc_NLK Catalytic dom 100.0 2.8E-36 6.1E-41 322.4 20.2 263 364-637 4-288 (372)
200 cd07867 STKc_CDC2L6 Catalytic 100.0 7.5E-36 1.6E-40 312.1 23.0 193 365-565 6-219 (317)
201 cd05603 STKc_SGK2 Catalytic do 100.0 1.7E-36 3.7E-41 317.4 18.1 232 366-632 1-242 (321)
202 cd06655 STKc_PAK2 Catalytic do 100.0 6.7E-36 1.5E-40 309.2 22.2 239 365-636 24-268 (296)
203 cd06611 STKc_SLK_like Catalyti 100.0 1.1E-35 2.3E-40 305.2 23.4 245 363-636 8-261 (280)
204 cd05629 STKc_NDR_like_fungal C 100.0 1.3E-36 2.8E-41 325.6 17.1 241 365-637 6-305 (377)
205 cd07872 STKc_PCTAIRE2 Catalyti 100.0 8.7E-36 1.9E-40 310.5 22.9 258 365-636 11-285 (309)
206 cd06615 PKc_MEK Catalytic doma 100.0 7.2E-36 1.6E-40 310.8 22.2 190 364-564 5-200 (308)
207 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 7.2E-36 1.6E-40 306.9 21.8 258 364-642 8-284 (284)
208 KOG0032 Ca2+/calmodulin-depend 100.0 5.8E-36 1.3E-40 313.3 21.1 240 365-636 40-292 (382)
209 cd06625 STKc_MEKK3_like Cataly 100.0 1.6E-35 3.4E-40 300.9 23.7 241 364-637 6-260 (263)
210 cd05616 STKc_cPKC_beta Catalyt 100.0 3.3E-36 7.2E-41 315.5 19.1 232 365-631 5-246 (323)
211 cd05625 STKc_LATS1 Catalytic d 100.0 2.5E-36 5.4E-41 324.0 18.6 190 365-565 6-251 (382)
212 cd06612 STKc_MST1_2 Catalytic 100.0 9.4E-36 2E-40 301.1 21.8 240 364-636 7-252 (256)
213 cd05073 PTKc_Hck Catalytic dom 100.0 9.1E-36 2E-40 302.2 21.6 243 364-640 10-259 (260)
214 KOG1025 Epidermal growth facto 100.0 8.2E-37 1.8E-41 324.2 14.0 247 363-643 699-959 (1177)
215 cd05598 STKc_LATS Catalytic do 100.0 1.2E-36 2.6E-41 325.8 15.6 242 364-637 5-301 (376)
216 cd08219 STKc_Nek3 Catalytic do 100.0 8.9E-36 1.9E-40 301.3 20.9 242 364-637 4-252 (255)
217 cd05057 PTKc_EGFR_like Catalyt 100.0 2.3E-35 5E-40 302.6 24.0 247 363-643 10-270 (279)
218 PHA03209 serine/threonine kina 100.0 1.1E-35 2.4E-40 315.6 22.3 184 363-563 69-257 (357)
219 cd05044 PTKc_c-ros Catalytic d 100.0 1.3E-35 2.9E-40 302.5 21.9 246 366-640 1-269 (269)
220 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.2E-35 2.6E-40 304.3 21.6 240 363-637 7-253 (277)
221 PHA03211 serine/threonine kina 100.0 1.3E-35 2.9E-40 321.6 22.8 183 365-564 174-364 (461)
222 cd05622 STKc_ROCK1 Catalytic d 100.0 4.9E-36 1.1E-40 319.6 19.0 245 363-637 46-304 (371)
223 PTZ00266 NIMA-related protein 100.0 5.1E-36 1.1E-40 339.5 20.1 249 364-636 17-294 (1021)
224 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.4E-35 3.1E-40 313.5 22.2 189 364-564 19-218 (343)
225 cd05083 PTKc_Chk Catalytic dom 100.0 1.7E-35 3.7E-40 299.1 21.8 242 363-640 9-253 (254)
226 cd07876 STKc_JNK2 Catalytic do 100.0 1.9E-35 4.1E-40 314.5 23.1 188 364-565 25-225 (359)
227 cd06613 STKc_MAP4K3_like Catal 100.0 5.9E-35 1.3E-39 296.4 25.5 245 365-636 8-259 (262)
228 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.5E-35 5.5E-40 303.1 22.9 256 363-639 8-268 (284)
229 KOG0199 ACK and related non-re 100.0 1.9E-36 4E-41 316.4 14.4 244 363-639 113-370 (1039)
230 cd07861 STKc_CDK1_euk Catalyti 100.0 2.6E-35 5.7E-40 303.0 22.9 193 365-565 5-205 (285)
231 cd05597 STKc_DMPK_like Catalyt 100.0 1E-35 2.2E-40 312.7 20.2 193 364-564 5-210 (331)
232 cd06640 STKc_MST4 Catalytic do 100.0 5.2E-35 1.1E-39 299.6 24.8 240 363-637 7-253 (277)
233 KOG0584 Serine/threonine prote 100.0 2.2E-36 4.8E-41 315.4 14.5 240 365-636 45-295 (632)
234 cd06658 STKc_PAK5 Catalytic do 100.0 7.3E-36 1.6E-40 308.3 18.3 240 365-637 27-272 (292)
235 cd05632 STKc_GRK5 Catalytic do 100.0 3.5E-35 7.5E-40 302.2 23.3 243 365-636 5-260 (285)
236 KOG0607 MAP kinase-interacting 100.0 5.1E-36 1.1E-40 287.3 15.7 267 356-636 74-360 (463)
237 cd05630 STKc_GRK6 Catalytic do 100.0 1.2E-35 2.7E-40 305.5 19.8 243 365-636 5-260 (285)
238 cd08221 STKc_Nek9 Catalytic do 100.0 3.1E-35 6.6E-40 297.5 22.3 242 364-637 4-253 (256)
239 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3E-35 6.5E-40 305.2 22.7 260 365-636 11-285 (301)
240 cd05586 STKc_Sck1_like Catalyt 100.0 4E-36 8.6E-41 316.0 16.2 231 368-631 1-243 (330)
241 cd05615 STKc_cPKC_alpha Cataly 100.0 1.4E-35 3.1E-40 310.6 20.2 233 365-632 5-247 (323)
242 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4E-35 8.6E-40 301.9 23.0 249 363-636 4-261 (286)
243 cd06609 STKc_MST3_like Catalyt 100.0 2.9E-35 6.4E-40 300.9 21.6 239 364-636 5-250 (274)
244 cd06631 STKc_YSK4 Catalytic do 100.0 5.2E-35 1.1E-39 297.5 23.2 241 364-636 4-261 (265)
245 PHA03207 serine/threonine kina 100.0 1.5E-35 3.3E-40 318.6 20.2 186 364-566 96-291 (392)
246 cd05110 PTKc_HER4 Catalytic do 100.0 3.8E-35 8.3E-40 304.7 22.5 246 364-643 11-270 (303)
247 cd06659 STKc_PAK6 Catalytic do 100.0 1.5E-35 3.2E-40 306.7 19.3 239 366-637 27-271 (297)
248 cd08223 STKc_Nek4 Catalytic do 100.0 5.9E-35 1.3E-39 295.6 23.0 241 364-636 4-253 (257)
249 PTZ00284 protein kinase; Provi 100.0 2.7E-35 5.8E-40 324.0 22.0 189 364-565 133-348 (467)
250 cd05623 STKc_MRCK_alpha Cataly 100.0 2.4E-35 5.2E-40 310.1 20.7 246 365-637 6-266 (332)
251 cd06607 STKc_TAO Catalytic dom 100.0 9.8E-35 2.1E-39 302.2 25.0 243 364-637 19-267 (307)
252 cd07875 STKc_JNK1 Catalytic do 100.0 2.9E-35 6.3E-40 313.7 21.5 188 364-565 28-228 (364)
253 cd08528 STKc_Nek10 Catalytic d 100.0 7.6E-35 1.7E-39 297.0 23.5 248 364-639 4-268 (269)
254 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.9E-35 1.5E-39 297.9 23.1 248 365-641 4-272 (273)
255 KOG4717 Serine/threonine prote 100.0 1.1E-35 2.4E-40 300.7 16.7 238 365-635 23-268 (864)
256 cd06638 STKc_myosinIIIA Cataly 100.0 3E-35 6.5E-40 302.8 20.3 246 365-637 23-283 (286)
257 smart00219 TyrKc Tyrosine kina 100.0 5.9E-35 1.3E-39 295.4 22.2 242 365-638 4-258 (258)
258 cd08218 STKc_Nek1 Catalytic do 100.0 4.8E-35 1E-39 296.1 21.4 241 364-636 4-252 (256)
259 cd06628 STKc_MAPKKK_Byr2_like 100.0 7.4E-35 1.6E-39 296.7 22.9 238 365-636 5-263 (267)
260 PF00069 Pkinase: Protein kina 100.0 1.4E-35 3.1E-40 300.4 17.5 245 365-636 4-256 (260)
261 cd05624 STKc_MRCK_beta Catalyt 100.0 2E-35 4.3E-40 310.6 19.0 247 364-637 5-266 (331)
262 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.1E-34 2.3E-39 298.5 23.9 253 365-636 6-282 (286)
263 cd07863 STKc_CDK4 Catalytic do 100.0 3.4E-35 7.3E-40 302.7 20.0 254 365-636 5-284 (288)
264 cd06629 STKc_MAPKKK_Bck1_like 100.0 7.4E-35 1.6E-39 297.6 22.4 246 364-636 5-268 (272)
265 cd07841 STKc_CDK7 Catalytic do 100.0 5.4E-35 1.2E-39 302.8 21.5 250 365-636 5-281 (298)
266 KOG0579 Ste20-like serine/thre 100.0 3.7E-36 8E-41 310.3 12.4 252 355-636 28-288 (1187)
267 KOG0596 Dual specificity; seri 100.0 7.6E-36 1.6E-40 305.5 14.6 251 355-636 356-626 (677)
268 cd05046 PTK_CCK4 Pseudokinase 100.0 8.5E-35 1.8E-39 297.6 22.4 247 365-639 10-274 (275)
269 cd07874 STKc_JNK3 Catalytic do 100.0 5E-35 1.1E-39 310.9 21.3 188 364-565 21-221 (355)
270 cd07839 STKc_CDK5 Catalytic do 100.0 2.3E-35 5E-40 303.3 18.1 251 365-636 5-280 (284)
271 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.3E-35 9.3E-40 301.0 20.1 243 364-636 20-278 (282)
272 cd06917 STKc_NAK1_like Catalyt 100.0 7.9E-35 1.7E-39 298.2 21.9 240 364-636 5-254 (277)
273 KOG0666 Cyclin C-dependent kin 100.0 5.7E-36 1.2E-40 286.2 12.2 205 356-566 19-244 (438)
274 cd05627 STKc_NDR2 Catalytic do 100.0 2E-35 4.3E-40 314.4 17.8 190 365-565 6-239 (360)
275 cd06639 STKc_myosinIIIB Cataly 100.0 9.3E-35 2E-39 300.0 22.1 245 365-636 27-286 (291)
276 cd07832 STKc_CCRK Catalytic do 100.0 1.2E-34 2.6E-39 298.2 22.7 254 364-636 4-281 (286)
277 cd06647 STKc_PAK_I Catalytic d 100.0 7.1E-35 1.5E-39 301.1 21.0 241 364-637 23-269 (293)
278 cd06635 STKc_TAO1 Catalytic do 100.0 4E-34 8.8E-39 298.9 26.7 247 364-641 29-281 (317)
279 cd06608 STKc_myosinIII_like Ca 100.0 6.8E-35 1.5E-39 297.9 20.3 246 364-636 10-271 (275)
280 cd08220 STKc_Nek8 Catalytic do 100.0 1.1E-34 2.5E-39 293.2 21.6 241 364-636 4-252 (256)
281 KOG0610 Putative serine/threon 100.0 9.9E-35 2.1E-39 288.8 20.4 241 364-635 81-390 (459)
282 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.5E-34 3.2E-39 294.2 22.2 248 364-636 5-263 (267)
283 cd06648 STKc_PAK_II Catalytic 100.0 2E-34 4.4E-39 296.5 23.4 239 365-636 24-268 (285)
284 KOG0983 Mitogen-activated prot 100.0 1.1E-35 2.3E-40 279.6 12.5 252 355-636 89-348 (391)
285 cd06605 PKc_MAPKK Catalytic do 100.0 1.2E-34 2.5E-39 294.8 21.3 246 364-636 5-256 (265)
286 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.9E-35 8.5E-40 301.9 17.7 262 365-636 6-282 (286)
287 cd05609 STKc_MAST Catalytic do 100.0 1.8E-34 4E-39 299.9 22.8 244 365-640 6-273 (305)
288 cd06651 STKc_MEKK3 Catalytic d 100.0 2.1E-34 4.6E-39 293.2 22.7 239 364-636 6-260 (266)
289 cd06641 STKc_MST3 Catalytic do 100.0 4.4E-34 9.6E-39 292.7 25.0 239 364-637 8-253 (277)
290 cd06616 PKc_MKK4 Catalytic dom 100.0 1.2E-34 2.7E-39 298.6 20.7 251 364-636 8-266 (288)
291 cd06632 STKc_MEKK1_plant Catal 100.0 2.2E-34 4.8E-39 291.4 22.1 240 365-636 5-254 (258)
292 cd07860 STKc_CDK2_3 Catalytic 100.0 1.3E-34 2.8E-39 297.7 20.7 192 365-565 5-204 (284)
293 cd08216 PK_STRAD Pseudokinase 100.0 1.9E-34 4.2E-39 301.1 22.2 253 364-636 6-294 (314)
294 cd05574 STKc_phototropin_like 100.0 3.1E-34 6.7E-39 299.8 23.7 244 365-639 6-287 (316)
295 cd06626 STKc_MEKK4 Catalytic d 100.0 1.8E-34 3.9E-39 293.2 20.7 244 364-636 4-260 (264)
296 cd07844 STKc_PCTAIRE_like Cata 100.0 2.6E-34 5.6E-39 296.7 22.1 191 365-565 10-207 (291)
297 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 5.8E-34 1.3E-38 293.4 24.7 253 365-636 6-265 (287)
298 cd08226 PK_STRAD_beta Pseudoki 100.0 4.3E-34 9.3E-39 300.3 24.1 193 366-565 4-213 (328)
299 cd05633 STKc_GRK3 Catalytic do 100.0 3.3E-34 7.1E-39 294.0 22.5 239 367-636 1-254 (279)
300 KOG4645 MAPKKK (MAP kinase kin 100.0 1.8E-36 3.8E-41 336.7 6.0 240 365-636 1240-1493(1509)
301 cd07842 STKc_CDK8_like Catalyt 100.0 2.4E-34 5.3E-39 300.4 21.7 196 365-566 5-220 (316)
302 cd06614 STKc_PAK Catalytic dom 100.0 3.6E-34 7.7E-39 294.9 22.6 240 365-636 24-269 (286)
303 cd06657 STKc_PAK4 Catalytic do 100.0 2.3E-34 5E-39 297.0 21.1 238 366-636 26-269 (292)
304 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.3E-34 5.1E-39 295.6 21.1 245 365-636 6-260 (283)
305 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5.8E-34 1.2E-38 294.1 23.9 190 365-564 10-206 (291)
306 cd06630 STKc_MEKK1 Catalytic d 100.0 3E-34 6.5E-39 292.3 21.4 242 365-636 5-263 (268)
307 cd07843 STKc_CDC2L1 Catalytic 100.0 4.8E-34 1E-38 295.0 23.2 193 363-565 8-210 (293)
308 cd08217 STKc_Nek2 Catalytic do 100.0 6E-34 1.3E-38 289.2 22.7 246 365-636 5-261 (265)
309 cd07831 STKc_MOK Catalytic dom 100.0 3.1E-34 6.8E-39 294.5 20.8 260 365-636 4-278 (282)
310 cd06652 STKc_MEKK2 Catalytic d 100.0 7.1E-34 1.5E-38 289.2 22.9 238 365-636 7-260 (265)
311 cd06623 PKc_MAPKK_plant_like C 100.0 8E-34 1.7E-38 288.3 23.2 244 364-637 5-256 (264)
312 cd07835 STKc_CDK1_like Catalyt 100.0 5.8E-34 1.3E-38 292.7 22.2 256 364-636 3-279 (283)
313 cd05122 PKc_STE Catalytic doma 100.0 9.4E-34 2E-38 285.2 22.9 241 365-636 5-250 (253)
314 cd05580 STKc_PKA Catalytic dom 100.0 4.3E-34 9.3E-39 294.9 20.7 237 364-635 5-252 (290)
315 cd08225 STKc_Nek5 Catalytic do 100.0 4.2E-34 9.1E-39 289.2 20.2 240 365-636 5-253 (257)
316 cd07837 STKc_CdkB_plant Cataly 100.0 4.5E-34 9.7E-39 295.5 20.7 254 365-636 6-290 (295)
317 cd05572 STKc_cGK_PKG Catalytic 100.0 9.2E-34 2E-38 287.8 22.6 232 368-630 1-240 (262)
318 KOG1006 Mitogen-activated prot 100.0 3E-36 6.6E-41 282.4 3.6 251 366-637 70-327 (361)
319 cd06634 STKc_TAO2 Catalytic do 100.0 6.4E-34 1.4E-38 296.2 21.3 243 364-637 19-267 (308)
320 cd07833 STKc_CDKL Catalytic do 100.0 4.4E-34 9.5E-39 294.3 19.9 263 364-636 5-284 (288)
321 cd05611 STKc_Rim15_like Cataly 100.0 1.3E-33 2.7E-38 286.5 22.7 243 366-639 2-250 (260)
322 cd06633 STKc_TAO3 Catalytic do 100.0 2.9E-33 6.2E-38 291.9 25.9 250 355-636 17-272 (313)
323 cd06618 PKc_MKK7 Catalytic dom 100.0 4.9E-34 1.1E-38 295.4 19.6 246 363-637 18-273 (296)
324 cd07840 STKc_CDK9_like Catalyt 100.0 9.4E-34 2E-38 291.5 21.6 250 365-636 4-283 (287)
325 KOG4250 TANK binding protein k 100.0 7.6E-35 1.7E-39 307.5 13.6 266 365-643 18-312 (732)
326 cd05579 STKc_MAST_like Catalyt 100.0 5.5E-34 1.2E-38 289.4 19.3 239 368-639 1-256 (265)
327 KOG1035 eIF-2alpha kinase GCN2 100.0 1.3E-34 2.9E-39 320.4 15.4 241 366-636 485-870 (1351)
328 cd05577 STKc_GRK Catalytic dom 100.0 1.4E-33 3.1E-38 289.0 22.0 237 368-633 1-245 (277)
329 cd07836 STKc_Pho85 Catalytic d 100.0 1.6E-33 3.5E-38 289.6 22.3 252 365-636 5-280 (284)
330 cd07845 STKc_CDK10 Catalytic d 100.0 1.1E-33 2.4E-38 294.6 20.9 250 365-636 12-289 (309)
331 cd07849 STKc_ERK1_2_like Catal 100.0 1.2E-33 2.5E-38 298.0 20.7 252 365-637 10-292 (336)
332 PHA03210 serine/threonine kina 100.0 5.3E-34 1.2E-38 314.9 18.1 193 363-563 151-369 (501)
333 cd05606 STKc_beta_ARK Catalyti 100.0 3.6E-33 7.9E-38 286.1 23.0 239 367-636 1-254 (278)
334 cd05613 STKc_MSK1_N N-terminal 100.0 2.1E-33 4.4E-38 289.8 21.2 243 364-635 4-266 (290)
335 KOG0200 Fibroblast/platelet-de 100.0 9.8E-34 2.1E-38 317.5 20.3 259 355-641 291-579 (609)
336 cd06627 STKc_Cdc7_like Catalyt 100.0 3.3E-33 7.2E-38 282.0 22.2 239 364-636 4-250 (254)
337 cd05578 STKc_Yank1 Catalytic d 100.0 5.1E-34 1.1E-38 289.0 16.2 240 364-635 4-253 (258)
338 cd07852 STKc_MAPK15 Catalytic 100.0 4.2E-33 9.1E-38 293.9 23.7 262 363-637 10-295 (337)
339 PHA03390 pk1 serine/threonine- 100.0 5.7E-33 1.2E-37 282.8 23.7 232 368-635 24-260 (267)
340 PTZ00024 cyclin-dependent prot 100.0 2.8E-33 6.1E-38 295.0 21.8 252 365-636 14-312 (335)
341 cd07850 STKc_JNK Catalytic dom 100.0 4.3E-33 9.3E-38 295.7 23.2 187 365-565 21-220 (353)
342 cd07865 STKc_CDK9 Catalytic do 100.0 1.4E-33 3.1E-38 293.7 19.2 191 365-565 17-227 (310)
343 cd07864 STKc_CDK12 Catalytic d 100.0 2.4E-33 5.1E-38 291.1 20.6 254 364-636 11-298 (302)
344 cd08530 STKc_CNK2-like Catalyt 100.0 2E-33 4.3E-38 284.0 19.5 242 365-636 5-252 (256)
345 cd05118 STKc_CMGC Catalytic do 100.0 2.1E-33 4.5E-38 288.4 19.9 262 365-636 4-279 (283)
346 cd06606 STKc_MAPKKK Catalytic 100.0 8E-33 1.7E-37 279.6 23.8 240 365-636 5-256 (260)
347 PLN00009 cyclin-dependent kina 100.0 3.2E-33 6.9E-38 289.0 21.1 251 365-636 7-283 (294)
348 cd08215 STKc_Nek Catalytic dom 100.0 3.5E-33 7.5E-38 282.3 21.0 242 365-636 5-254 (258)
349 PHA02882 putative serine/threo 100.0 1.9E-33 4.1E-38 290.6 18.9 247 364-638 16-293 (294)
350 KOG0586 Serine/threonine prote 100.0 6.4E-34 1.4E-38 296.8 15.3 238 365-636 61-305 (596)
351 cd07838 STKc_CDK4_6_like Catal 100.0 6.4E-33 1.4E-37 285.4 22.7 250 365-636 4-283 (287)
352 cd05583 STKc_MSK_N N-terminal 100.0 2.1E-33 4.5E-38 289.4 19.1 249 364-641 4-267 (288)
353 cd07834 STKc_MAPK Catalytic do 100.0 3.7E-33 8E-38 293.5 20.8 262 364-648 4-302 (330)
354 cd07830 STKc_MAK_like Catalyti 100.0 2.5E-33 5.5E-38 287.9 18.4 263 365-636 4-279 (283)
355 cd07855 STKc_ERK5 Catalytic do 100.0 1.5E-33 3.2E-38 297.0 16.5 260 365-636 10-293 (334)
356 cd07879 STKc_p38delta_MAPK13 C 100.0 8.8E-33 1.9E-37 291.9 22.4 270 365-648 20-310 (342)
357 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.7E-32 3.8E-37 289.7 24.2 266 365-644 20-307 (343)
358 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.4E-32 3.1E-37 288.4 23.2 261 365-637 15-288 (328)
359 cd07854 STKc_MAPK4_6 Catalytic 100.0 9.2E-33 2E-37 291.8 20.6 259 365-636 10-299 (342)
360 KOG0986 G protein-coupled rece 100.0 6.8E-34 1.5E-38 284.7 11.1 191 366-565 191-389 (591)
361 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.8E-33 6E-38 295.2 16.3 266 365-643 10-299 (337)
362 KOG0604 MAP kinase-activated p 100.0 8.6E-34 1.9E-38 270.2 11.0 243 364-636 66-321 (400)
363 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.6E-32 5.7E-37 277.5 22.2 239 364-636 6-260 (264)
364 cd07857 STKc_MPK1 Catalytic do 100.0 9.1E-33 2E-37 290.7 19.4 292 365-668 5-322 (332)
365 cd07866 STKc_BUR1 Catalytic do 100.0 1.2E-32 2.6E-37 286.9 19.8 250 365-636 13-307 (311)
366 cd05123 STKc_AGC Catalytic dom 100.0 2.4E-32 5.2E-37 275.2 21.2 231 368-633 1-240 (250)
367 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.2E-32 6.9E-37 287.9 23.0 188 365-564 22-220 (345)
368 cd07851 STKc_p38 Catalytic dom 100.0 4.8E-33 1E-37 294.1 16.5 259 365-636 20-297 (343)
369 cd08222 STKc_Nek11 Catalytic d 100.0 1.1E-32 2.3E-37 279.7 18.2 242 364-636 4-256 (260)
370 cd05581 STKc_PDK1 Catalytic do 100.0 9.8E-33 2.1E-37 282.9 17.1 236 365-635 6-275 (280)
371 cd07829 STKc_CDK_like Catalyti 100.0 2E-32 4.2E-37 281.0 19.1 250 365-636 4-278 (282)
372 KOG1024 Receptor-like protein 100.0 2.6E-32 5.6E-37 268.5 18.1 248 366-642 290-556 (563)
373 KOG0669 Cyclin T-dependent kin 100.0 1.2E-34 2.6E-39 269.5 1.3 193 365-567 22-234 (376)
374 KOG0690 Serine/threonine prote 100.0 2.9E-33 6.3E-38 268.9 10.5 238 355-629 165-411 (516)
375 cd05610 STKc_MASTL Catalytic d 100.0 5.1E-32 1.1E-36 308.3 21.8 140 365-513 9-152 (669)
376 cd05576 STKc_RPK118_like Catal 100.0 3.6E-32 7.8E-37 271.8 18.1 220 371-634 4-226 (237)
377 KOG0662 Cyclin-dependent kinas 100.0 3.2E-32 7E-37 240.9 14.5 190 364-563 6-204 (292)
378 KOG0671 LAMMER dual specificit 100.0 1.4E-33 2.9E-38 278.1 6.1 260 365-636 94-405 (415)
379 KOG0587 Traf2- and Nck-interac 100.0 7.8E-32 1.7E-36 290.0 18.0 243 365-636 24-281 (953)
380 KOG0612 Rho-associated, coiled 100.0 2.1E-32 4.5E-37 300.8 13.1 243 363-635 78-336 (1317)
381 KOG0603 Ribosomal protein S6 k 100.0 3.8E-32 8.3E-37 285.1 13.0 231 365-636 327-562 (612)
382 KOG4236 Serine/threonine prote 100.0 2.1E-32 4.5E-37 277.7 9.1 239 365-635 569-817 (888)
383 KOG1151 Tousled-like protein k 100.0 6.5E-32 1.4E-36 268.9 11.8 248 363-635 466-739 (775)
384 smart00220 S_TKc Serine/Threon 100.0 1.2E-30 2.5E-35 260.8 20.7 234 372-636 1-240 (244)
385 KOG0984 Mitogen-activated prot 100.0 4.6E-31 1E-35 239.0 15.5 206 354-564 40-254 (282)
386 KOG1027 Serine/threonine prote 100.0 6.7E-32 1.5E-36 289.2 9.6 237 365-636 514-766 (903)
387 PLN03224 probable serine/threo 100.0 1.8E-30 4E-35 280.9 19.8 258 364-636 149-499 (507)
388 PLN03225 Serine/threonine-prot 100.0 2.1E-30 4.5E-35 287.9 18.5 259 364-636 136-449 (566)
389 KOG0696 Serine/threonine prote 100.0 5.5E-31 1.2E-35 260.3 9.7 232 364-630 353-594 (683)
390 KOG0614 cGMP-dependent protein 100.0 2E-30 4.4E-35 262.6 7.2 241 355-630 417-665 (732)
391 KOG0668 Casein kinase II, alph 100.0 1.9E-29 4.2E-34 231.7 11.7 186 363-564 41-235 (338)
392 KOG0664 Nemo-like MAPK-related 100.0 1.7E-30 3.6E-35 244.4 1.9 190 366-566 59-262 (449)
393 cd00180 PKc Catalytic domain o 100.0 1.2E-27 2.5E-32 233.2 21.9 206 368-637 1-214 (215)
394 KOG0608 Warts/lats-like serine 100.0 6.4E-29 1.4E-33 257.3 13.4 193 366-569 635-878 (1034)
395 KOG1290 Serine/threonine prote 100.0 4.5E-28 9.7E-33 245.3 19.1 127 364-498 82-221 (590)
396 KOG0695 Serine/threonine prote 100.0 5.4E-28 1.2E-32 233.4 14.0 239 365-630 255-503 (593)
397 KOG1152 Signal transduction se 100.0 1.1E-28 2.4E-33 253.8 8.1 191 363-563 564-770 (772)
398 smart00221 STYKc Protein kinas 99.9 7E-27 1.5E-31 230.9 17.9 191 365-564 4-202 (225)
399 KOG0665 Jun-N-terminal kinase 99.9 4.9E-28 1.1E-32 233.6 8.8 184 366-564 23-219 (369)
400 KOG1345 Serine/threonine kinas 99.9 3.4E-27 7.3E-32 222.3 12.4 261 353-641 18-288 (378)
401 KOG0576 Mitogen-activated prot 99.9 3.5E-28 7.6E-33 254.2 4.3 245 364-636 19-270 (829)
402 KOG0670 U4/U6-associated splic 99.9 2.8E-28 6.2E-33 247.7 2.1 203 354-566 423-639 (752)
403 KOG1167 Serine/threonine prote 99.9 6.3E-27 1.4E-31 234.4 10.6 189 364-567 40-283 (418)
404 smart00750 KIND kinase non-cat 99.9 7.8E-25 1.7E-29 208.1 15.2 168 441-642 1-170 (176)
405 PLN00181 protein SPA1-RELATED; 99.9 8.8E-26 1.9E-30 263.6 10.3 189 412-636 28-264 (793)
406 KOG0195 Integrin-linked kinase 99.9 1.7E-25 3.6E-30 210.7 7.3 256 355-642 187-447 (448)
407 PLN00113 leucine-rich repeat r 99.9 1.5E-23 3.3E-28 251.5 16.5 184 25-208 27-239 (968)
408 PRK09188 serine/threonine prot 99.9 5.9E-23 1.3E-27 213.5 13.5 152 365-535 23-195 (365)
409 KOG1164 Casein kinase (serine/ 99.9 3E-21 6.5E-26 201.4 20.3 263 364-655 22-311 (322)
410 KOG1163 Casein kinase (serine/ 99.9 1.5E-21 3.3E-26 181.3 12.7 266 365-659 20-302 (341)
411 COG0515 SPS1 Serine/threonine 99.9 3E-20 6.5E-25 194.1 23.2 254 365-637 5-275 (384)
412 KOG1165 Casein kinase (serine/ 99.9 1.6E-20 3.6E-25 182.2 17.8 268 363-659 31-317 (449)
413 cd05147 RIO1_euk RIO kinase fa 99.8 5.2E-21 1.1E-25 183.0 11.3 138 366-515 3-167 (190)
414 KOG0590 Checkpoint kinase and 99.8 7.3E-22 1.6E-26 218.8 5.6 245 365-636 323-584 (601)
415 PRK12274 serine/threonine prot 99.8 5.1E-20 1.1E-24 173.9 14.4 183 365-568 7-213 (218)
416 PLN03150 hypothetical protein; 99.8 3.8E-20 8.3E-25 208.2 15.8 130 23-155 368-510 (623)
417 KOG1023 Natriuretic peptide re 99.8 3.4E-20 7.3E-25 196.0 14.3 215 410-645 1-228 (484)
418 KOG1240 Protein kinase contain 99.8 3.3E-21 7.1E-26 212.5 5.9 241 365-640 28-294 (1431)
419 cd05145 RIO1_like RIO kinase f 99.8 7.1E-20 1.5E-24 175.9 13.5 138 366-516 3-168 (190)
420 PRK10359 lipopolysaccharide co 99.8 2.5E-20 5.4E-25 180.2 9.1 165 365-557 36-217 (232)
421 PRK10345 hypothetical protein; 99.8 1.2E-18 2.6E-23 168.2 13.7 133 365-511 7-155 (210)
422 PF14531 Kinase-like: Kinase-l 99.8 2.9E-19 6.3E-24 177.9 9.6 230 365-628 17-288 (288)
423 KOG4158 BRPK/PTEN-induced prot 99.8 2.5E-18 5.4E-23 170.8 12.4 193 414-639 274-512 (598)
424 KOG0603 Ribosomal protein S6 k 99.8 1E-19 2.2E-24 191.9 1.3 185 367-564 1-193 (612)
425 PRK14879 serine/threonine prot 99.7 2.5E-17 5.4E-22 161.4 14.1 134 366-514 2-143 (211)
426 smart00090 RIO RIO-like kinase 99.7 2.2E-17 4.8E-22 163.5 13.2 139 363-515 31-198 (237)
427 TIGR03724 arch_bud32 Kae1-asso 99.7 2E-17 4.4E-22 160.4 12.4 131 367-515 1-139 (199)
428 KOG1166 Mitotic checkpoint ser 99.7 8.7E-18 1.9E-22 189.7 10.7 186 363-562 701-903 (974)
429 cd05144 RIO2_C RIO kinase fami 99.7 8.1E-17 1.8E-21 156.0 12.4 136 362-516 17-176 (198)
430 PRK09605 bifunctional UGMP fam 99.7 1.2E-16 2.6E-21 178.1 14.2 131 365-514 338-476 (535)
431 KOG0617 Ras suppressor protein 99.6 5.4E-18 1.2E-22 149.9 -4.4 143 64-208 32-176 (264)
432 cd05119 RIO RIO kinase family, 99.6 2.5E-15 5.5E-20 144.1 11.0 136 365-516 2-165 (187)
433 cd05120 APH_ChoK_like Aminogly 99.6 3.1E-15 6.6E-20 137.8 10.6 134 366-515 4-139 (155)
434 KOG1033 eIF-2alpha kinase PEK/ 99.6 2.5E-16 5.4E-21 163.5 3.3 117 430-557 330-457 (516)
435 PRK01723 3-deoxy-D-manno-octul 99.6 8.7E-15 1.9E-19 145.2 14.0 137 363-514 34-191 (239)
436 KOG0606 Microtubule-associated 99.6 1.1E-15 2.4E-20 169.4 6.2 203 364-635 87-310 (1205)
437 KOG0617 Ras suppressor protein 99.5 3.3E-16 7.1E-21 138.7 -2.5 128 82-212 27-157 (264)
438 KOG0444 Cytoskeletal regulator 99.5 7.5E-16 1.6E-20 160.8 -2.1 140 66-207 127-293 (1255)
439 KOG4194 Membrane glycoprotein 99.5 9.2E-15 2E-19 152.0 1.1 139 59-198 263-408 (873)
440 TIGR01982 UbiB 2-polyprenylphe 99.5 2E-13 4.3E-18 147.3 11.4 141 366-517 123-309 (437)
441 KOG1266 Protein kinase [Signal 99.5 5.6E-14 1.2E-18 137.1 5.8 150 407-561 118-281 (458)
442 KOG0590 Checkpoint kinase and 99.5 6.8E-15 1.5E-19 163.5 -0.7 243 366-635 26-284 (601)
443 KOG0472 Leucine-rich repeat pr 99.5 1.6E-15 3.4E-20 151.2 -5.1 139 67-210 162-302 (565)
444 KOG4237 Extracellular matrix p 99.5 5.2E-14 1.1E-18 140.4 5.5 157 65-221 67-365 (498)
445 KOG4194 Membrane glycoprotein 99.4 2.1E-14 4.6E-19 149.3 -0.7 157 65-221 293-458 (873)
446 KOG0444 Cytoskeletal regulator 99.4 2.1E-14 4.5E-19 150.2 -2.9 153 65-219 222-379 (1255)
447 KOG0601 Cyclin-dependent kinas 99.4 7.8E-13 1.7E-17 140.4 7.1 249 353-636 107-378 (524)
448 cd05151 ChoK Choline Kinase (C 99.3 6.8E-12 1.5E-16 118.2 9.9 130 366-513 4-135 (170)
449 KOG1243 Protein kinase [Genera 99.3 6.9E-11 1.5E-15 126.8 16.0 164 381-561 34-202 (690)
450 PLN03150 hypothetical protein; 99.3 6.9E-12 1.5E-16 141.7 8.6 108 112-219 419-532 (623)
451 PRK15370 E3 ubiquitin-protein 99.3 4.1E-11 8.9E-16 136.1 14.5 168 22-201 58-302 (754)
452 PRK04750 ubiB putative ubiquin 99.2 1E-11 2.3E-16 135.4 8.0 140 366-517 125-316 (537)
453 PF14580 LRR_9: Leucine-rich r 99.2 5.6E-12 1.2E-16 117.1 4.9 123 84-211 15-146 (175)
454 KOG0472 Leucine-rich repeat pr 99.2 7E-13 1.5E-17 132.5 -1.2 132 65-201 183-316 (565)
455 cd05146 RIO3_euk RIO kinase fa 99.2 1.4E-10 3.1E-15 109.9 12.8 136 366-516 3-175 (197)
456 KOG0618 Serine/threonine phosp 99.2 1.5E-12 3.3E-17 142.7 -1.4 126 65-193 359-488 (1081)
457 KOG0532 Leucine-rich repeat (L 99.2 5.1E-13 1.1E-17 139.1 -5.6 151 69-224 102-255 (722)
458 PF14580 LRR_9: Leucine-rich r 99.2 1.3E-11 2.8E-16 114.8 3.8 120 66-188 20-147 (175)
459 cd05154 ACAD10_11_like Acyl-Co 99.2 2.4E-10 5.2E-15 112.6 12.5 143 366-514 4-206 (223)
460 COG3642 Mn2+-dependent serine/ 99.1 7.4E-10 1.6E-14 101.2 12.5 131 366-514 2-140 (204)
461 PRK15387 E3 ubiquitin-protein 99.1 4.7E-11 1E-15 134.9 5.1 109 88-210 342-450 (788)
462 PRK15370 E3 ubiquitin-protein 99.1 1.3E-10 2.9E-15 132.0 8.3 137 64-212 198-335 (754)
463 KOG3087 Serine/threonine prote 99.1 1.8E-09 3.9E-14 98.1 12.5 141 366-514 13-165 (229)
464 PRK15387 E3 ubiquitin-protein 99.1 3.9E-10 8.4E-15 127.5 9.8 113 66-194 223-335 (788)
465 KOG0532 Leucine-rich repeat (L 99.0 2E-11 4.4E-16 127.3 -1.2 133 65-202 121-254 (722)
466 KOG0601 Cyclin-dependent kinas 99.0 1.3E-10 2.9E-15 123.5 4.8 240 366-642 271-519 (524)
467 KOG1259 Nischarin, modulator o 99.0 2.7E-11 5.9E-16 116.9 -0.4 120 84-207 280-401 (490)
468 KOG1259 Nischarin, modulator o 99.0 5.4E-11 1.2E-15 114.8 -0.6 126 66-195 285-413 (490)
469 PLN03210 Resistant to P. syrin 98.9 3.8E-09 8.3E-14 128.1 12.5 102 66-169 590-691 (1153)
470 PLN03210 Resistant to P. syrin 98.9 3.3E-09 7.1E-14 128.7 11.8 134 65-201 611-744 (1153)
471 PRK15123 lipopolysaccharide co 98.9 1.4E-08 2.9E-13 102.1 13.9 142 365-514 27-194 (268)
472 COG0478 RIO-like serine/threon 98.9 6.7E-09 1.5E-13 100.7 10.6 138 358-513 89-250 (304)
473 KOG3741 Poly(A) ribonuclease s 98.9 3.6E-08 7.9E-13 102.8 16.6 172 372-561 288-475 (655)
474 PF01163 RIO1: RIO1 family; I 98.9 7.8E-09 1.7E-13 97.8 10.6 125 375-515 1-156 (188)
475 KOG4237 Extracellular matrix p 98.9 2.2E-10 4.8E-15 114.8 -0.5 149 69-221 50-207 (498)
476 PF13855 LRR_8: Leucine rich r 98.9 1.6E-09 3.4E-14 82.8 3.7 61 111-171 1-61 (61)
477 KOG0618 Serine/threonine phosp 98.9 3.7E-10 8E-15 124.4 -0.6 135 67-206 47-181 (1081)
478 COG4886 Leucine-rich repeat (L 98.8 1.1E-09 2.4E-14 118.1 3.0 138 65-205 116-255 (394)
479 PF13855 LRR_8: Leucine rich r 98.8 1.9E-09 4.1E-14 82.4 2.8 60 88-147 1-61 (61)
480 cd00116 LRR_RI Leucine-rich re 98.8 7.9E-10 1.7E-14 115.5 0.9 131 65-195 81-235 (319)
481 KOG0606 Microtubule-associated 98.8 1.4E-09 3.1E-14 121.7 1.9 235 366-632 810-1084(1205)
482 COG4886 Leucine-rich repeat (L 98.8 2.7E-09 5.9E-14 115.0 4.1 153 55-210 80-237 (394)
483 KOG4579 Leucine-rich repeat (L 98.7 6E-10 1.3E-14 95.7 -2.5 134 66-201 28-166 (177)
484 PF08263 LRRNT_2: Leucine rich 98.7 1.6E-08 3.5E-13 70.8 4.4 38 26-63 2-43 (43)
485 cd00116 LRR_RI Leucine-rich re 98.7 4.2E-09 9.1E-14 110.0 1.8 131 65-195 51-207 (319)
486 COG4248 Uncharacterized protei 98.7 1.9E-07 4.1E-12 95.1 12.7 267 365-643 16-302 (637)
487 COG0661 AarF Predicted unusual 98.6 1.7E-07 3.8E-12 101.8 12.0 152 356-518 120-318 (517)
488 PF06293 Kdo: Lipopolysacchari 98.5 7.4E-07 1.6E-11 86.6 11.8 106 400-514 55-170 (206)
489 KOG2137 Protein kinase [Signal 98.5 2.3E-08 5E-13 108.1 1.2 144 467-635 105-263 (700)
490 KOG3207 Beta-tubulin folding c 98.5 2.5E-08 5.3E-13 101.7 0.1 129 65-194 146-314 (505)
491 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 2.2E-06 4.7E-11 84.4 13.8 133 366-513 7-181 (226)
492 PRK09902 hypothetical protein; 98.5 2.8E-06 6E-11 80.9 13.7 138 368-513 26-178 (216)
493 KOG1859 Leucine-rich repeat pr 98.4 3.7E-09 8.1E-14 113.5 -7.3 125 89-217 165-294 (1096)
494 KOG1859 Leucine-rich repeat pr 98.4 2E-09 4.3E-14 115.5 -9.4 124 66-194 165-292 (1096)
495 KOG0531 Protein phosphatase 1, 98.3 1.4E-07 3E-12 102.1 0.5 105 65-173 95-200 (414)
496 KOG0531 Protein phosphatase 1, 98.2 2.4E-07 5.1E-12 100.3 0.4 124 67-194 74-199 (414)
497 KOG4579 Leucine-rich repeat (L 98.2 1.1E-07 2.4E-12 82.1 -1.8 107 65-173 53-160 (177)
498 PF12799 LRR_4: Leucine Rich r 98.2 8.7E-07 1.9E-11 62.1 2.9 36 112-148 2-37 (44)
499 COG1718 RIO1 Serine/threonine 98.2 1.7E-05 3.6E-10 76.7 12.4 137 366-516 54-217 (268)
500 KOG1235 Predicted unusual prot 98.1 1.6E-05 3.6E-10 86.3 11.8 152 357-518 157-358 (538)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.1e-61 Score=572.46 Aligned_cols=516 Identities=28% Similarity=0.434 Sum_probs=343.0
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
..++.|+|++|.+++.++. +..+++|+.|+|++|++.+.+|....+++|+.|+|++|+++|.+|..+.++++|+.|+|+
T Consensus 428 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls 507 (968)
T PLN00113 428 PLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLS 507 (968)
T ss_pred CCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECc
Confidence 4677888888888887665 667788888888888888877765566788888888888888888888888888888888
Q ss_pred cCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCCCcCCCCCCcc---ccccccccCC
Q 005880 144 FNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSA---FTQNAALCGS 218 (672)
Q Consensus 144 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~---~~~n~~lc~~ 218 (672)
+|+++|.+|..+.++++|+.|+|++|+++|.++ +..+++|+.|+|++|+++|.+|..+..++.+. +.+|+..+..
T Consensus 508 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~ 587 (968)
T PLN00113 508 ENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSL 587 (968)
T ss_pred CCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeC
Confidence 888888888888888888888888888887443 45777888888888888888887666554443 3344433322
Q ss_pred CCccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCcccceeeeehhhHHHHHHH
Q 005880 219 PMQACKTMVTDPKKPGSDGAIASPLNPGNNPTNVVSSTPSSIPTNTDPNNKPASPQKTSSSKISSVAVIAIVVGDFLVLA 298 (672)
Q Consensus 219 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ii~ivvg~~~~l~ 298 (672)
|... ...........+ ++ ..+... ++.. .+.... .........+++++++++++++
T Consensus 588 p~~~------------~~~~~~~~~~~~-n~----~lc~~~-~~~~----~~~c~~--~~~~~~~~~~~~~~~~~~~~~~ 643 (968)
T PLN00113 588 PSTG------------AFLAINASAVAG-NI----DLCGGD-TTSG----LPPCKR--VRKTPSWWFYITCTLGAFLVLA 643 (968)
T ss_pred CCcc------------hhcccChhhhcC-Cc----cccCCc-cccC----CCCCcc--ccccceeeeehhHHHHHHHHHH
Confidence 2110 000000000000 00 000000 0000 000000 0111122233333333333222
Q ss_pred HHHHHHHhhheeccccccccccchhhhhhccCCCCCcccccccCCCceeeec--CccccCHHHHHHHH--hcccCcCCeE
Q 005880 299 IISLLLYCYFWRNYVKNKTRSKLLESEKILYSSSPYPAQQAGYERGSMVFFE--GTKRFELEDLLRAS--AEMLGKGGFG 374 (672)
Q Consensus 299 ii~~l~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~--~~~lg~G~~g 374 (672)
++++ + ++++|++++.+.+. . +.+... . ....+. ..+.+.++++.... .+.||+|+||
T Consensus 644 ~~~~-~-~~~~~~~~~~~~~~-~-~~~~~~-----~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g 704 (968)
T PLN00113 644 LVAF-G-FVFIRGRNNLELKR-V-ENEDGT-----W----------ELQFFDSKVSKSITINDILSSLKEENVISRGKKG 704 (968)
T ss_pred HHHH-H-HHHHHhhhcccccc-c-cccccc-----c----------cccccccccchhhhHHHHHhhCCcccEEccCCCe
Confidence 2222 2 22222221111110 0 000000 0 000011 11345555554443 3579999999
Q ss_pred EEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChhHHhhcCCCC
Q 005880 375 TAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGP 453 (672)
Q Consensus 375 ~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~ 453 (672)
.||+|+. .+|..||||+++.... ....|++.+++++|||||+++|+|.+++..++||||+++|+|.++++
T Consensus 705 ~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~----- 775 (968)
T PLN00113 705 ASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR----- 775 (968)
T ss_pred eEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh-----
Confidence 9999996 5789999999875432 12346888999999999999999999999999999999999999995
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC-CCCCCCCcccCCCcc
Q 005880 454 GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-STVPRSNGYRAPELS 532 (672)
Q Consensus 454 ~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-~~~~~t~~y~aPE~l 532 (672)
.++|.++.+|+.|+|+||+|||+.+ +.+|+||||||+||+++.++.+++. ||....... ....++.+|+|||++
T Consensus 776 ---~l~~~~~~~i~~~ia~~L~yLH~~~-~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~ 850 (968)
T PLN00113 776 ---NLSWERRRKIAIGIAKALRFLHCRC-SPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETR 850 (968)
T ss_pred ---cCCHHHHHHHHHHHHHHHHHhccCC-CCCeecCCCCHHhEEECCCCceEEE-eccccccccCCCccccccccCcccc
Confidence 2789999999999999999999655 4799999999999999999888876 665543322 244678899999976
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccc-cChHHHHH
Q 005880 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRY-KDIEEEMV 611 (672)
Q Consensus 533 ~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~ 611 (672)
. +..+++|+|||||||++|||+||+.||+..... ...+.+|.+...........+|+..... ....++..
T Consensus 851 ~--~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (968)
T PLN00113 851 E--TKDITEKSDIYGFGLILIELLTGKSPADAEFGV-------HGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIV 921 (968)
T ss_pred c--CCCCCcccchhhHHHHHHHHHhCCCCCCcccCC-------CCcHHHHHHHhcCccchhheeCccccCCCCccHHHHH
Confidence 4 567899999999999999999999999543221 3457777766555444445555544322 22345667
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCC
Q 005880 612 GLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEV 646 (672)
Q Consensus 612 ~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 646 (672)
++.+++.+||+.||++||||.||++.|+++.+...
T Consensus 922 ~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~ 956 (968)
T PLN00113 922 EVMNLALHCTATDPTARPCANDVLKTLESASRSSS 956 (968)
T ss_pred HHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcccc
Confidence 88999999999999999999999999999876433
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-53 Score=444.43 Aligned_cols=282 Identities=46% Similarity=0.750 Sum_probs=245.2
Q ss_pred CccccCHHHHHHHHh-----cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEE
Q 005880 351 GTKRFELEDLLRASA-----EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYY 425 (672)
Q Consensus 351 ~~~~~~~~~l~~~~~-----~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 425 (672)
..+.|++.++..++. +.||+|+||.||+|.+.+|+.||||++........++|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 346799999999884 689999999999999999999999988765432156699999999999999999999999
Q ss_pred EcCC-eEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcE
Q 005880 426 FARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNA 504 (672)
Q Consensus 426 ~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~ 504 (672)
.+.+ +.+||||||++|+|.++|+..... +++|.+|++||.++|+||+|||+.+. ++||||||||+|||+|+++++
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~-~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCP-PPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCC-CCEecCCCCHHHeeECCCCCE
Confidence 9988 599999999999999999976532 78999999999999999999998764 689999999999999999999
Q ss_pred EEeccCCCccCCC-CC----C-CCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCC
Q 005880 505 RVSDFGLSIFAPP-ST----V-PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVD 578 (672)
Q Consensus 505 kl~DfG~a~~~~~-~~----~-~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~ 578 (672)
||+|||+|+.... .. . .||.+|+|||++. .+..++|+|||||||+++||+||+.+.+...... ...
T Consensus 217 KlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~--~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~------~~~ 288 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYAS--TGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRG------ELS 288 (361)
T ss_pred EccCccCcccCCccccceeeecCCCCccCChhhhc--cCCcCcccccccchHHHHHHHhCCcccCCCCCcc------ccc
Confidence 9999999987764 32 2 7899999999654 4689999999999999999999998887544222 445
Q ss_pred hhHHHHHHHhhhccccccchhhccccChH-HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 579 LPRWVQSVVREEWTAEVFDLELMRYKDIE-EEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
+.+|....+.+....+++|+.+....... +++..+.+++.+|++.+|.+||+|.||+++|+.+...
T Consensus 289 l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 289 LVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 99999999999999999999987433332 6888899999999999999999999999999776644
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-47 Score=396.46 Aligned_cols=252 Identities=35% Similarity=0.538 Sum_probs=208.1
Q ss_pred HHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcch--HHHHHHHHHHHcCCCCCceeeeEEEEEcCC-eEEEEEeecC
Q 005880 363 ASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGG--KREFEQHMEVLGRLRHPNLVGLKAYYFARE-EKLLVSEYMP 439 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~ 439 (672)
.+.+.+|+|+||+||+|.+++...||||++....... .++|.+|+.+|.+++|||||+++|+|.++. ..++||||++
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 3456699999999999999854459999998644332 569999999999999999999999999887 7899999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC-cEecCCCCCCEEeCCCC-cEEEeccCCCccCCC
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK-LTHGNIKSTNVLLDKTG-NARVSDFGLSIFAPP 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~-iiH~Dlkp~NIll~~~~-~~kl~DfG~a~~~~~ 517 (672)
+|+|.++++... ...+++..+++|+.|||+||.||| +.+ ||||||||+|||++.++ ++||+|||+++....
T Consensus 124 ~GsL~~~l~~~~---~~~l~~~~~l~~aldiArGm~YLH----~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 124 GGSLSVLLHKKR---KRKLPLKVRLRIALDIARGMEYLH----SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred CCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHh----cCCCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 999999998741 356999999999999999999999 667 99999999999999997 999999999976653
Q ss_pred C-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 518 S-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 518 ~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
. ...||..|||||++......|+.|+||||||+++|||+||+.||..... .+....+......
T Consensus 197 ~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~------------~~~~~~v~~~~~R 264 (362)
T KOG0192|consen 197 SKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP------------VQVASAVVVGGLR 264 (362)
T ss_pred ccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH------------HHHHHHHHhcCCC
Confidence 2 3678999999998864346899999999999999999999999975421 2222333222211
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
..+ ...+...+..++.+||..||+.||++.|++..|+.+..
T Consensus 265 p~~----------p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 265 PPI----------PKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred CCC----------CccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 111 12245567888889999999999999999999999865
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-46 Score=370.05 Aligned_cols=253 Identities=28% Similarity=0.425 Sum_probs=209.0
Q ss_pred cCHHHHHHHHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccC-CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC-eE
Q 005880 355 FELEDLLRASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE-EK 431 (672)
Q Consensus 355 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~ 431 (672)
+...|+ ...+.||+|..|+|||++++ +++.+|+|.+... .....+++.+|++++++.+||+||+++|.|+.+. +.
T Consensus 76 i~~~dl--e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~i 153 (364)
T KOG0581|consen 76 ISLSDL--ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEI 153 (364)
T ss_pred cCHHHh--hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceE
Confidence 555565 34578999999999999965 6899999999533 3345789999999999999999999999999998 59
Q ss_pred EEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCC
Q 005880 432 LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL 511 (672)
Q Consensus 432 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~ 511 (672)
.++||||++|+|++++... ..+++...-+|+.+|++||.|||+ +++||||||||+|||++..|++||||||.
T Consensus 154 sI~mEYMDgGSLd~~~k~~-----g~i~E~~L~~ia~~VL~GL~YLh~---~~~IIHRDIKPsNlLvNskGeVKicDFGV 225 (364)
T KOG0581|consen 154 SICMEYMDGGSLDDILKRV-----GRIPEPVLGKIARAVLRGLSYLHE---ERKIIHRDIKPSNLLVNSKGEVKICDFGV 225 (364)
T ss_pred EeehhhcCCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhh---ccCeeeccCCHHHeeeccCCCEEeccccc
Confidence 9999999999999999754 348999999999999999999993 38999999999999999999999999999
Q ss_pred CccCCCC---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 512 SIFAPPS---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 512 a~~~~~~---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
++.+..+ +.+||..|||||.+ .+..|+.++||||||+.++|+.+|+.||....+. ..+..+.+..++.
T Consensus 226 S~~lvnS~a~tfvGT~~YMsPERi--~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~-------~~~~~~Ll~~Iv~ 296 (364)
T KOG0581|consen 226 SGILVNSIANTFVGTSAYMSPERI--SGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP-------YLDIFELLCAIVD 296 (364)
T ss_pred cHHhhhhhcccccccccccChhhh--cCCcCCcccceecccHHHHHHhhCCCCCCCcCCC-------CCCHHHHHHHHhc
Confidence 9877654 77899999999954 5779999999999999999999999999754211 2344445555544
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+.. ...+. .....++..++..||++||.+|||++|+++
T Consensus 297 ~pp---------P~lP~-~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 297 EPP---------PRLPE-GEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCC---------CCCCc-ccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 321 11111 124456888888999999999999999975
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-46 Score=382.94 Aligned_cols=257 Identities=28% Similarity=0.424 Sum_probs=215.6
Q ss_pred cCHHHHHHHHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEE
Q 005880 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLV 434 (672)
Q Consensus 355 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 434 (672)
++++.-.....+.||+|.||.||.|.++....||+|.++.... ..+.|.+|+++|.+|+|+|||+++|+|..++..+||
T Consensus 201 wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIV 279 (468)
T KOG0197|consen 201 WEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIV 279 (468)
T ss_pred eeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecccc-ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEE
Confidence 3444444467889999999999999999888999999987644 567899999999999999999999999998899999
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
||||+.|+|.++|+... +..+...+.+.++.|||+|++||+ ++++|||||.++||||+++..+||+|||+|+.
T Consensus 280 tE~m~~GsLl~yLr~~~---~~~l~~~~Ll~~a~qIaeGM~YLe----s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRTRE---GGLLNLPQLLDFAAQIAEGMAYLE----SKNYIHRDLAARNILVDEDLVVKISDFGLARL 352 (468)
T ss_pred EEecccCcHHHHhhhcC---CCccchHHHHHHHHHHHHHHHHHH----hCCccchhhhhhheeeccCceEEEcccccccc
Confidence 99999999999998732 356899999999999999999999 89999999999999999999999999999996
Q ss_pred CCCCCCCC------CCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 515 APPSTVPR------SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 515 ~~~~~~~~------t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
...+.+.. ...|.|||.+. ...++.|||||||||+||||+| |+.||.. ....+.+..+.
T Consensus 353 ~~d~~Y~~~~~~kfPIkWtAPEa~~--~~~FS~kSDVWSFGVlL~E~fT~G~~py~~------------msn~ev~~~le 418 (468)
T KOG0197|consen 353 IGDDEYTASEGGKFPIKWTAPEALN--YGKFSSKSDVWSFGVLLWELFTYGRVPYPG------------MSNEEVLELLE 418 (468)
T ss_pred cCCCceeecCCCCCCceecCHHHHh--hCCcccccceeehhhhHHHHhccCCCCCCC------------CCHHHHHHHHh
Confidence 65553322 23599999775 5689999999999999999999 7888753 34445555444
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
+... .+..+.++..+.+++..||+.+|++|||++.+...|+++...
T Consensus 419 ~GyR-----------lp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 419 RGYR-----------LPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred ccCc-----------CCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 4432 122344666789999999999999999999999999988754
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-46 Score=369.99 Aligned_cols=245 Identities=24% Similarity=0.382 Sum_probs=200.0
Q ss_pred HhcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcc-------hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIG-------GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 435 (672)
+.+.||+|+||.|-+|. .++|+.||||++++.... .....++|+++|++|+|||||++++++...+..|+||
T Consensus 176 i~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVl 255 (475)
T KOG0615|consen 176 ISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVL 255 (475)
T ss_pred eeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEE
Confidence 45789999999999999 567999999999753221 2345689999999999999999999999999999999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC---CcEEEeccCCC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT---GNARVSDFGLS 512 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~---~~~kl~DfG~a 512 (672)
||++||+|.+.+-.+. .+.+..-..+++|++.|+.||| +.||+||||||+|||+..+ ..+||+|||+|
T Consensus 256 E~v~GGeLfd~vv~nk-----~l~ed~~K~~f~Qll~avkYLH----~~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 256 EYVEGGELFDKVVANK-----YLREDLGKLLFKQLLTAVKYLH----SQGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred EEecCccHHHHHHhcc-----ccccchhHHHHHHHHHHHHHHH----HcCcccccCCcceEEeccCCcceEEEecccchh
Confidence 9999999999998664 4777888999999999999999 8999999999999999765 67999999999
Q ss_pred ccCCCC----CCCCCCcccCCCccccCCCCCCc-hhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 513 IFAPPS----TVPRSNGYRAPELSSSDGRKQSQ-KSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 513 ~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~-~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
+..... +.+||+.|.|||++...+..+.+ |+||||+|||||-+++|.+||....... ...+++.
T Consensus 327 K~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-----------sl~eQI~ 395 (475)
T KOG0615|consen 327 KVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-----------SLKEQIL 395 (475)
T ss_pred hccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-----------cHHHHHh
Confidence 988654 77899999999999877766665 9999999999999999999997653221 1222222
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+..... ......+...+..++|.+||..||++|||+.|+++
T Consensus 396 ~G~y~f--------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 396 KGRYAF--------GPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred cCcccc--------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 222110 11112334456678888999999999999999974
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-45 Score=361.31 Aligned_cols=189 Identities=29% Similarity=0.430 Sum_probs=171.5
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccC--CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA--SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
..||+|+||+||+|+.+ ++..||||.+.+. .....+.+..|+++|+.++|||||++++++.+++..|+|||||.+||
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGD 95 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGD 95 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCC
Confidence 45999999999999954 6899999999766 34456678999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC------CcEEEeccCCCccCC
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT------GNARVSDFGLSIFAP 516 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~------~~~kl~DfG~a~~~~ 516 (672)
|.++++... .+++.+...++.|+|.||++|| +++||||||||+|||++.. -.+||+|||+|+.+.
T Consensus 96 Ls~yi~~~~-----~l~e~t~r~Fm~QLA~alq~L~----~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~ 166 (429)
T KOG0595|consen 96 LSDYIRRRG-----RLPEATARHFMQQLASALQFLH----ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ 166 (429)
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence 999998654 4999999999999999999999 8999999999999999864 458999999999998
Q ss_pred CC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 517 PS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 517 ~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
+. +.+|++-|||||++. ..+|+.|+|+||+|+|+|++++|+.||...
T Consensus 167 ~~~~a~tlcGSplYMAPEV~~--~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 167 PGSMAETLCGSPLYMAPEVIM--SQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred chhHHHHhhCCccccCHHHHH--hccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 76 678999999999875 568999999999999999999999999743
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-44 Score=374.99 Aligned_cols=238 Identities=26% Similarity=0.424 Sum_probs=201.3
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+++||+|+|+.+|+++. ..|+.||+|++.+... ...+...+||++.+.|+|||||+++++|++.++.|+|.|+|+
T Consensus 22 ~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~ 101 (592)
T KOG0575|consen 22 RGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCH 101 (592)
T ss_pred eeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecC
Confidence 357899999999999996 8899999999976432 356788999999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+++|.++++.. .++++.++..++.||+.||.||| +++|+|||||..|++++++.++||+|||+|......
T Consensus 102 ~~sL~el~Krr-----k~ltEpEary~l~QIv~GlkYLH----~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 102 RGSLMELLKRR-----KPLTEPEARYFLRQIVEGLKYLH----SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred CccHHHHHHhc-----CCCCcHHHHHHHHHHHHHHHHHH----hcCceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 99999999843 56999999999999999999999 899999999999999999999999999999877643
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
+.+||+-|+|||++. ....+..+||||+|||+|.|+.|++||+.. .+.+-...+...+..
T Consensus 173 Erk~TlCGTPNYIAPEVl~--k~gHsfEvDiWSlGcvmYtLL~G~PPFetk------------~vkety~~Ik~~~Y~-- 236 (592)
T KOG0575|consen 173 ERKKTLCGTPNYIAPEVLN--KSGHSFEVDIWSLGCVMYTLLVGRPPFETK------------TVKETYNKIKLNEYS-- 236 (592)
T ss_pred cccceecCCCcccChhHhc--cCCCCCchhhhhhhhHHHhhhhCCCCcccc------------hHHHHHHHHHhcCcc--
Confidence 778999999999987 456788999999999999999999999743 233333333322211
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
- +.. ...+-.+||.++|+.||.+|||+++|+.
T Consensus 237 --~-----P~~---ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 237 --M-----PSH---LSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred --c-----ccc---cCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1 111 2233557777999999999999999984
No 9
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-44 Score=389.26 Aligned_cols=252 Identities=29% Similarity=0.416 Sum_probs=211.7
Q ss_pred HHhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEE
Q 005880 363 ASAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 435 (672)
...+.||+|+||.||+|+.. +.+.||||.+++.... ..++|++|++++..++|||||+++|+|..++..++|+
T Consensus 489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvF 568 (774)
T KOG1026|consen 489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVF 568 (774)
T ss_pred eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEE
Confidence 45678999999999999943 3467999999987665 7889999999999999999999999999999999999
Q ss_pred eecCCCChhHHhhcCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEE
Q 005880 436 EYMPNGSLFWLLHGNRGP---------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARV 506 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~---------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl 506 (672)
|||..|||.++|...... .+.+++..+.+.||.|||.|+.||- ++.+|||||..+|+||.++..+||
T Consensus 569 EYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs----~~~FVHRDLATRNCLVge~l~VKI 644 (774)
T KOG1026|consen 569 EYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS----SHHFVHRDLATRNCLVGENLVVKI 644 (774)
T ss_pred EecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH----hCcccccchhhhhceeccceEEEe
Confidence 999999999999764321 1345999999999999999999999 889999999999999999999999
Q ss_pred eccCCCccCCCCCCCC-------CCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCC
Q 005880 507 SDFGLSIFAPPSTVPR-------SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVD 578 (672)
Q Consensus 507 ~DfG~a~~~~~~~~~~-------t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~ 578 (672)
+|||+++.....++.+ ..+|||||-+. -+++|++||||||||||||+++ |+.||.+....+
T Consensus 645 sDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIl--y~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E--------- 713 (774)
T KOG1026|consen 645 SDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESIL--YGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE--------- 713 (774)
T ss_pred cccccchhhhhhhhhcccCCceeeeecCCHHHhh--cCcccchhhhhhhhhhhhhhhccccCcccccchHH---------
Confidence 9999999887664432 34799999665 5699999999999999999998 899987543221
Q ss_pred hhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 579 LPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
+-+.++.+. + ....+.++.++..|+..||+..|++||+++||-..|+...+
T Consensus 714 ----VIe~i~~g~--------l--L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 714 ----VIECIRAGQ--------L--LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred ----HHHHHHcCC--------c--ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 222233321 1 23335677789999999999999999999999999998753
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.6e-45 Score=342.37 Aligned_cols=253 Identities=25% Similarity=0.388 Sum_probs=206.6
Q ss_pred HHhcccCcCCeEEEEEEE-EcCCcEEEEEEcccC--CcchHHHHHHHHHHHcCCCCCceeeeEEE-EEcCCe-EEEEEee
Q 005880 363 ASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDA--SIGGKREFEQHMEVLGRLRHPNLVGLKAY-YFAREE-KLLVSEY 437 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~-~~~~~~-~~lv~e~ 437 (672)
.+.++||+|.||+||++. ..+|..||.|.++-. +....++...|+.+|++|+|||||+++++ +.++.+ .+|||||
T Consensus 22 ~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~ 101 (375)
T KOG0591|consen 22 QILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMEL 101 (375)
T ss_pred HHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHh
Confidence 456889999999999999 678999999998733 23356788999999999999999999984 444445 6899999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
|..|+|..+++..+. +++.+++.++|+++.|+++||.++|....+.-|+||||||.||+++.+|.+||+|||+++.+..
T Consensus 102 c~~GDLsqmIk~~K~-qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s 180 (375)
T KOG0591|consen 102 CDAGDLSQMIKHFKK-QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSS 180 (375)
T ss_pred hcccCHHHHHHHHHh-ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcc
Confidence 999999999987653 4567999999999999999999999544434499999999999999999999999999998877
Q ss_pred C-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 518 S-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 518 ~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
. ..+||+.||+||.+. +..|+.|+||||+||++|||+.-++||.++ .+.+..+.+...+.
T Consensus 181 ~~tfA~S~VGTPyYMSPE~i~--~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------------n~~~L~~KI~qgd~- 245 (375)
T KOG0591|consen 181 KTTFAHSLVGTPYYMSPERIH--ESGYNFKSDIWSLGCLLYEMCALQSPFYGD------------NLLSLCKKIEQGDY- 245 (375)
T ss_pred hhHHHHhhcCCCcccCHHHHh--cCCCCcchhHHHHHHHHHHHHhcCCCcccc------------cHHHHHHHHHcCCC-
Confidence 5 578999999999765 678999999999999999999999999754 44444444433321
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
..+ + .+.....+.+||..|+..||+.||+...++..+..
T Consensus 246 ~~~--------p-~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 246 PPL--------P-DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred CCC--------c-HHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 111 1 13455678899999999999999997666655544
No 11
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-43 Score=356.59 Aligned_cols=263 Identities=22% Similarity=0.306 Sum_probs=204.4
Q ss_pred HHHHhcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcc-hHHHHHHHHHHHcCCC-CCceeeeEEEEEcCC-eEEEEEe
Q 005880 361 LRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIG-GKREFEQHMEVLGRLR-HPNLVGLKAYYFARE-EKLLVSE 436 (672)
Q Consensus 361 ~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~lv~e 436 (672)
.|.+.++||.|.||.||+|+ ..+|..||||++++.... ++..-.+|++.|++|. |||||++.+++.+.+ ..++|||
T Consensus 11 RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE 90 (538)
T KOG0661|consen 11 RYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFE 90 (538)
T ss_pred HHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHH
Confidence 45677899999999999999 567999999999865433 2334578999999998 999999999999988 8899999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
||+ .+|++++++.+ .++++..+..|+.||++||+|+| .+|+.|||+||+|||+.....+||+|||+||...
T Consensus 91 ~Md-~NLYqLmK~R~----r~fse~~irnim~QilqGL~hiH----k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 91 FMD-CNLYQLMKDRN----RLFSESDIRNIMYQILQGLAHIH----KHGFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred hhh-hhHHHHHhhcC----CcCCHHHHHHHHHHHHHHHHHHH----hcCcccccCChhheEecccceeEecccccccccc
Confidence 995 59999998653 68999999999999999999999 8999999999999999999999999999999887
Q ss_pred CC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCC----CCCCCCChhHHHHHHHh
Q 005880 517 PS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGM----GCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 517 ~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 588 (672)
.. .++.|..|+|||++.. ...|+.+.||||+|||++|+.+-++-|-+..+-+++ ..-+..+...|.....
T Consensus 162 SkpPYTeYVSTRWYRAPEvLLr-s~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~- 239 (538)
T KOG0661|consen 162 SKPPYTEYVSTRWYRAPEVLLR-SGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN- 239 (538)
T ss_pred cCCCcchhhhcccccchHHhhh-ccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH-
Confidence 64 5677999999999875 468999999999999999999999998765433211 0001111111211100
Q ss_pred hhccccccchhhcc--ccC----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 589 EEWTAEVFDLELMR--YKD----IEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 589 ~~~~~~~~d~~~~~--~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
+...+.-.+.. ... +.....+.++++.+|+++||.+||||.|+++.
T Consensus 240 ---La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 240 ---LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred ---HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 00000000000 000 12244667889999999999999999999864
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.9e-43 Score=336.50 Aligned_cols=262 Identities=23% Similarity=0.291 Sum_probs=198.2
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
...++|+|+||.||+++.+ +|+.||||++.+... .-.+-..+|+++|++++|+|+|.++.+|......+||+|||+.
T Consensus 6 ~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh 85 (396)
T KOG0593|consen 6 KLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH 85 (396)
T ss_pred hhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch
Confidence 3467999999999999955 699999999975433 2456779999999999999999999999999999999999988
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC-CC-
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP-PS- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~-~~- 518 (672)
.-|.+ |.... .-++...+.++++|+++|+.|+| ++++|||||||+||||+.+|.+||||||+|+.+. ++
T Consensus 86 TvL~e-Le~~p----~G~~~~~vk~~l~Q~l~ai~~cH----k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd 156 (396)
T KOG0593|consen 86 TVLHE-LERYP----NGVPSELVKKYLYQLLKAIHFCH----KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD 156 (396)
T ss_pred HHHHH-HHhcc----CCCCHHHHHHHHHHHHHHhhhhh----hcCeecccCChhheEEecCCcEEeccchhhHhhcCCcc
Confidence 54444 44332 23888999999999999999999 8999999999999999999999999999999887 33
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCChhHHHHHHHh-hhc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG---CGGAVDLPRWVQSVVR-EEW 591 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~ 591 (672)
+++.|..|+|||++.. ..+|+..+||||+||++.||++|.+-|-+..+-++.- .-.+ ++....++++. ...
T Consensus 157 ~YTDYVATRWYRaPELLvG-DtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG-~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 157 NYTDYVATRWYRAPELLVG-DTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLG-NLIPRHQSIFSSNPF 234 (396)
T ss_pred hhhhhhhhhhccChhhhcc-cCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHc-ccCHHHHHHhccCCc
Confidence 5667999999998764 3689999999999999999999999987654322110 0000 11111122222 222
Q ss_pred cccccchhhccccChH----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 TAEVFDLELMRYKDIE----EEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~----~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
...+.-|........+ ....-+++++..|++.||.+|++-+|++.
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 2222112211111111 12235788999999999999999999874
No 13
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-41 Score=340.32 Aligned_cols=282 Identities=26% Similarity=0.357 Sum_probs=211.7
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHc--CCCCCceeeeEEEEEcCC----eEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLG--RLRHPNLVGLKAYYFARE----EKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~--~l~h~niv~l~~~~~~~~----~~~lv~e~~ 438 (672)
.+.+|+|+||.||||.+. ++.||||++... +.+.|+.|-+|.+ .++|+||++++++-.... +++||+||.
T Consensus 215 ~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh 290 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFH 290 (534)
T ss_pred HHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeec
Confidence 467999999999999998 599999999743 5677877777765 468999999999987555 889999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC-----CCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC-----KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
+.|+|.++|..+. ++|....+|+..+++||+|||+.. ++++|+|||||++||||..|+++.|+|||+|.
T Consensus 291 ~kGsL~dyL~~nt------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl 364 (534)
T KOG3653|consen 291 PKGSLCDYLKANT------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLAL 364 (534)
T ss_pred cCCcHHHHHHhcc------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeE
Confidence 9999999998765 999999999999999999999743 35679999999999999999999999999998
Q ss_pred cCCCC-------CCCCCCcccCCCccccCCC----CCCchhHHHHHHHHHHHHHhCCCCCCC-CCCCC--CC--CCCCCC
Q 005880 514 FAPPS-------TVPRSNGYRAPELSSSDGR----KQSQKSDVYSFGVLLLELLTGKCPSVI-DGGGA--GM--GCGGAV 577 (672)
Q Consensus 514 ~~~~~-------~~~~t~~y~aPE~l~~~~~----~~~~~~DV~S~Gvvl~el~tg~~P~~~-~~~~~--~~--~~~~~~ 577 (672)
.+.+. ..+||.+|||||++...-. ..-.+.||||+|.|+|||++.-.-++. ..+.- .+ +.+...
T Consensus 365 ~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hP 444 (534)
T KOG3653|consen 365 RLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHP 444 (534)
T ss_pred EecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCC
Confidence 77654 4678999999999864311 122478999999999999996544321 11110 01 112223
Q ss_pred ChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCC
Q 005880 578 DLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPCHENFDSVS 657 (672)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~~~~~~~~ 657 (672)
.+.+....+++++....+.|.-.. ...+..+.+.+..||..||+.|.|+.=|.+++.++......+..+.+.+..
T Consensus 445 t~e~mq~~VV~kK~RP~~p~~W~~-----h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~~~~~s~~~~~ 519 (534)
T KOG3653|consen 445 TLEEMQELVVRKKQRPKIPDAWRK-----HAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWEDSSGESSSSLV 519 (534)
T ss_pred CHHHHHHHHHhhccCCCChhhhhc-----CccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCccCCccccccC
Confidence 334443334444332222221111 234567888889999999999999999999999998766655555555544
Q ss_pred CCCC
Q 005880 658 DSPC 661 (672)
Q Consensus 658 ~~~~ 661 (672)
..-.
T Consensus 520 ~~~~ 523 (534)
T KOG3653|consen 520 TPVD 523 (534)
T ss_pred CCCc
Confidence 4443
No 14
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-42 Score=342.58 Aligned_cols=250 Identities=21% Similarity=0.337 Sum_probs=203.5
Q ss_pred HHhcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 363 ASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
...+.||.|..++||+|+ ...++.||||++.-.... +...+++|+..|+.++||||++++..|..+...|+||.||.+
T Consensus 29 eL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~ 108 (516)
T KOG0582|consen 29 ELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAG 108 (516)
T ss_pred eEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcC
Confidence 345789999999999999 557899999999744333 358899999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|++.++++..-.. -+++..+..|.+++++||.||| .+|.||||||+.||||+.+|.+||+|||.+..+..
T Consensus 109 GS~ldIik~~~~~---Gl~E~~Ia~iLre~LkaL~YLH----~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 109 GSLLDIIKTYYPD---GLEEASIATILREVLKALDYLH----QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred CcHHHHHHHHccc---cccHHHHHHHHHHHHHHHHHHH----hcCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 9999999876543 3899999999999999999999 88999999999999999999999999998644322
Q ss_pred ------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 518 ------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 518 ------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
.+..+|+.|||||++......|+.|+||||||+...||.+|..||.... ..+.+...+.+..
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p------------PmkvLl~tLqn~p 249 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP------------PMKVLLLTLQNDP 249 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC------------hHHHHHHHhcCCC
Confidence 3567899999999988888899999999999999999999999997432 1222222222221
Q ss_pred cc---cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 TA---EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 ~~---~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. ...+.+ ........+.+++..||.+||.+|||+.++++
T Consensus 250 p~~~t~~~~~d-----~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 250 PTLLTSGLDKD-----EDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CCcccccCChH-----HhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 10 011111 01122346888899999999999999999875
No 15
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.7e-42 Score=323.61 Aligned_cols=266 Identities=24% Similarity=0.323 Sum_probs=201.1
Q ss_pred HHHhcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 362 RASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
|...+++|+|.||.||+|+ ..+|+.||||+++.... .-.....+|++.|+.++|+||+.++++|-..+..-||+|||
T Consensus 4 Y~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm 83 (318)
T KOG0659|consen 4 YEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFM 83 (318)
T ss_pred hhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEec
Confidence 3455789999999999999 56799999999975432 23567789999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
+. +|+..++... ..++..++..++.++++||+|+| ++.|+||||||.|+|++++|.+||+|||+|+.+...
T Consensus 84 ~t-dLe~vIkd~~----i~l~pa~iK~y~~m~LkGl~y~H----~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 84 PT-DLEVVIKDKN----IILSPADIKSYMLMTLKGLAYCH----SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred cc-cHHHHhcccc----cccCHHHHHHHHHHHHHHHHHHH----hhhhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 65 9999998654 67999999999999999999999 889999999999999999999999999999988754
Q ss_pred -----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC----CCCCCChhHHHHHHHhh
Q 005880 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG----CGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 589 (672)
..+.|..|+|||++.+ .+.|+..+||||.|||+.||+-|.+-|.++.+-+++. .-+.....+|-....-.
T Consensus 155 ~~~~~~~V~TRWYRAPELLfG-sr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lp 233 (318)
T KOG0659|consen 155 NRIQTHQVVTRWYRAPELLFG-SRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLP 233 (318)
T ss_pred CcccccceeeeeccChHHhcc-chhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccc
Confidence 2346789999999875 5789999999999999999999988776654322110 00011111110000000
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
....-..-+......-........++++..++..||.+|+|+.|++++
T Consensus 234 dY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 234 DYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 000000000000000112233456889999999999999999999864
No 16
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3e-41 Score=346.60 Aligned_cols=261 Identities=19% Similarity=0.252 Sum_probs=208.2
Q ss_pred CccccCHHHHHHHHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcch---HHHHHHHHHHHcCCCCCceeeeEEEEEc
Q 005880 351 GTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGG---KREFEQHMEVLGRLRHPNLVGLKAYYFA 427 (672)
Q Consensus 351 ~~~~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~ 427 (672)
..+.++.+|+.......||+|++|.||+|.+ +|+.||||+++...... .+.|.+|++++.+++||||++++|++.+
T Consensus 11 ~~~~i~~~~i~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~ 89 (283)
T PHA02988 11 DIKCIESDDIDKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIID 89 (283)
T ss_pred cceecCHHHcCCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEe
Confidence 3455677777555456899999999999998 48999999997654332 4678899999999999999999999876
Q ss_pred ----CCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CCcEecCCCCCCEEeCCCC
Q 005880 428 ----REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS-LKLTHGNIKSTNVLLDKTG 502 (672)
Q Consensus 428 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~~iiH~Dlkp~NIll~~~~ 502 (672)
....++||||+++|+|.+++... ..+++....+++.|++.||.||| + .+++||||||+||++++++
T Consensus 90 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lH----~~~~~~Hrdlkp~nill~~~~ 160 (283)
T PHA02988 90 IVDDLPRLSLILEYCTRGYLREVLDKE-----KDLSFKTKLDMAIDCCKGLYNLY----KYTNKPYKNLTSVSFLVTENY 160 (283)
T ss_pred cccCCCceEEEEEeCCCCcHHHHHhhC-----CCCChhHHHHHHHHHHHHHHHHH----hcCCCCCCcCChhhEEECCCC
Confidence 34678999999999999999754 35899999999999999999999 4 4788999999999999999
Q ss_pred cEEEeccCCCccCCCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChh
Q 005880 503 NARVSDFGLSIFAPPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLP 580 (672)
Q Consensus 503 ~~kl~DfG~a~~~~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~ 580 (672)
.+||+|||+++..... ...++..|+|||++......++.++|||||||++|||++|+.||... ...
T Consensus 161 ~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~------------~~~ 228 (283)
T PHA02988 161 KLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL------------TTK 228 (283)
T ss_pred cEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCC------------CHH
Confidence 9999999999765443 34567899999987543367899999999999999999999999643 222
Q ss_pred HHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 581 RWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 581 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
+............. .. ......+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 229 ~~~~~i~~~~~~~~-------~~---~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 229 EIYDLIINKNNSLK-------LP---LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHHHHHHhcCCCCC-------CC---CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 33333322211100 00 1233457888889999999999999999999998763
No 17
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-42 Score=363.94 Aligned_cols=251 Identities=25% Similarity=0.429 Sum_probs=211.0
Q ss_pred hcccCcCCeEEEEEEEEcC----CcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLDD----GSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.++||.|.||.||+|+++- ...||||.++.... ..+.+|..|..||.+.+||||+++.|+.......+||+|||+
T Consensus 634 e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyME 713 (996)
T KOG0196|consen 634 EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYME 713 (996)
T ss_pred EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhh
Confidence 4789999999999999762 35799999997554 356799999999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCC
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST 519 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 519 (672)
+|+|+.+|+.+.+ .+++.+...++++||.|+.||- ++++|||||.++||||+.+..+|++|||+++.+.++.
T Consensus 714 NGsLDsFLR~~DG----qftviQLVgMLrGIAsGMkYLs----dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 714 NGSLDSFLRQNDG----QFTVIQLVGMLRGIASGMKYLS----DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred CCcHHHHHhhcCC----ceEeehHHHHHHHHHHHhHHHh----hcCchhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 9999999997763 4999999999999999999999 8999999999999999999999999999999876542
Q ss_pred --CCC------CCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 520 --VPR------SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 520 --~~~------t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
... ..+|-|||.+. .+++|.++||||||||+||.++ |..||...... +.+.++..+-
T Consensus 786 ~~~ytt~GGKIPiRWTAPEAIa--~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ------------dVIkaIe~gy 851 (996)
T KOG0196|consen 786 EAAYTTLGGKIPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ------------DVIKAIEQGY 851 (996)
T ss_pred CccccccCCccceeecChhHhh--hcccCchhhccccceEEEEecccCCCcccccchH------------HHHHHHHhcc
Confidence 111 24699999664 5799999999999999999887 89998754322 2233222221
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSP 648 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 648 (672)
+.+...+++..|.+|++.||++|-.+||++.|++..|+++.+.-.+-
T Consensus 852 -----------RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SL 898 (996)
T KOG0196|consen 852 -----------RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSL 898 (996)
T ss_pred -----------CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhh
Confidence 22333567788999999999999999999999999999987654443
No 18
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-41 Score=346.00 Aligned_cols=259 Identities=27% Similarity=0.380 Sum_probs=197.6
Q ss_pred hcccCcCCeEEEEEEE-EcCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e~~~ 439 (672)
.++||+|.||.||+|+ ..+|+.||+|+++-.. .+......+||.+|++|+||||+++.+...+. ...|||+|||+
T Consensus 122 i~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMd 201 (560)
T KOG0600|consen 122 IEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMD 201 (560)
T ss_pred HHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEeccc
Confidence 4789999999999999 6689999999997544 33456678999999999999999999998876 68999999997
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+ ||.-++.... ..++..++..++.|++.||+|+| ..+|+|||||.+|||||.+|.+||+|||+|+++...
T Consensus 202 h-DL~GLl~~p~----vkft~~qIKc~mkQLl~Gl~~cH----~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 202 H-DLSGLLSSPG----VKFTEPQIKCYMKQLLEGLEYCH----SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred c-hhhhhhcCCC----cccChHHHHHHHHHHHHHHHHHh----hcCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 7 8888887542 56999999999999999999999 899999999999999999999999999999977654
Q ss_pred -----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC----CCCCCChhHHHHHHHhh
Q 005880 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG----CGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 589 (672)
..+.|..|+|||++.+ ...|+.++|+||.||||.||++|++.|.+..+-+++. ..+......|-...+.
T Consensus 273 ~~~~T~rVvTLWYRpPELLLG-~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP- 350 (560)
T KOG0600|consen 273 SAPYTSRVVTLWYRPPELLLG-ATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLP- 350 (560)
T ss_pred CcccccceEEeeccChHHhcC-CcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCC-
Confidence 2345788999999875 4689999999999999999999999998654322110 0011111112100000
Q ss_pred hccccccchhhccccChHH----HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEE----EMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~----~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....+.+...-...+.+ .....++|+..+|..||.+|.|+.++++
T Consensus 351 --~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 351 --HATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred --cccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 00111111110011111 1244667888999999999999999874
No 19
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-41 Score=334.76 Aligned_cols=232 Identities=27% Similarity=0.428 Sum_probs=195.0
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
..++||+|+||.||.++. ++++.+|+|++++.... +.+...+|..+|.+++||.||+++..|++.+..|+|+||+.
T Consensus 29 ~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~ 108 (357)
T KOG0598|consen 29 ILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLN 108 (357)
T ss_pred eeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccC
Confidence 457899999999999994 46899999999876543 34567889999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
||.|+.+|++.. .+++..+.-++..|+.||.||| +.+||||||||+|||+|++|+++|+|||+++....
T Consensus 109 GGeLf~hL~~eg-----~F~E~~arfYlaEi~lAL~~LH----~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~ 179 (357)
T KOG0598|consen 109 GGELFYHLQREG-----RFSEDRARFYLAEIVLALGYLH----SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG 179 (357)
T ss_pred CccHHHHHHhcC-----CcchhHHHHHHHHHHHHHHHHH----hCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence 999999998654 4899999999999999999999 89999999999999999999999999999984432
Q ss_pred ---CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 518 ---STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 518 ---~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
.+.+||+.|||||++. +..|+.++|.||+|+++|||++|.+||... +..++.+.+.++..
T Consensus 180 ~~t~tfcGT~eYmAPEil~--~~gy~~~vDWWsLGillYeML~G~pPF~~~------------~~~~~~~~I~~~k~--- 242 (357)
T KOG0598|consen 180 DATRTFCGTPEYMAPEILL--GKGYDKAVDWWSLGILLYEMLTGKPPFYAE------------DVKKMYDKILKGKL--- 242 (357)
T ss_pred CccccccCCccccChHHHh--cCCCCcccchHhHHHHHHHHhhCCCCCcCc------------cHHHHHHHHhcCcC---
Confidence 2668999999999886 458999999999999999999999999743 45566666655541
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCC
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP 629 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP 629 (672)
......+.. +..+++.+.+..||++|.
T Consensus 243 -----~~~p~~ls~---~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 243 -----PLPPGYLSE---EARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -----CCCCccCCH---HHHHHHHHHhccCHHHhc
Confidence 001111233 345666699999999996
No 20
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-42 Score=353.88 Aligned_cols=239 Identities=25% Similarity=0.394 Sum_probs=200.9
Q ss_pred hcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
-++||+|+.|.||.|+ ..+++.||||++.......++-+.+|+.+|+..+|+|||.+++.|...++.|+|||||++|+|
T Consensus 278 ~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsL 357 (550)
T KOG0578|consen 278 FKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSL 357 (550)
T ss_pred hhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCch
Confidence 3689999999999999 567899999999876666677889999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+.+.... +++.++..|++++++||+||| ..+|+|||||.+|||++.+|.+||+|||++..+...
T Consensus 358 TDvVt~~~------~~E~qIA~Icre~l~aL~fLH----~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~ 427 (550)
T KOG0578|consen 358 TDVVTKTR------MTEGQIAAICREILQGLKFLH----ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS 427 (550)
T ss_pred hhhhhccc------ccHHHHHHHHHHHHHHHHHHH----hcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccc
Confidence 99997543 899999999999999999999 899999999999999999999999999999776543
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
+.+||+.|||||+.. ...|++|+||||||++++||+-|++||..+..- +-+..+...+ .+
T Consensus 428 TmVGTPYWMAPEVvt--rk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl------------rAlyLIa~ng------~P 487 (550)
T KOG0578|consen 428 TMVGTPYWMAPEVVT--RKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL------------RALYLIATNG------TP 487 (550)
T ss_pred cccCCCCccchhhhh--hcccCccccchhhhhHHHHHhcCCCCccCCChH------------HHHHHHhhcC------CC
Confidence 678999999999765 468999999999999999999999999754321 1111111111 11
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
++. ..+.....+.+++.+||..||++||++.|+|+
T Consensus 488 ~lk---~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 488 KLK---NPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred CcC---CccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 222 22333455777777999999999999999985
No 21
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-41 Score=340.68 Aligned_cols=248 Identities=29% Similarity=0.449 Sum_probs=196.9
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC--eEEEEEeecC
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE--EKLLVSEYMP 439 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e~~~ 439 (672)
...+.||+|+||.||++... +|...|||.+........+.+.+|+++|.+++|||||+++|.....+ ..++.|||++
T Consensus 20 ~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~ 99 (313)
T KOG0198|consen 20 SKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAP 99 (313)
T ss_pred hhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccC
Confidence 34688999999999999965 49999999987653333667899999999999999999999865555 5889999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-CCcEEEeccCCCccCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK-TGNARVSDFGLSIFAPP- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~-~~~~kl~DfG~a~~~~~- 517 (672)
+|+|.+++.+..+ .+++..+..++.||++||+||| +++||||||||+|||++. ++.+||+|||+++....
T Consensus 100 ~GsL~~~~~~~g~----~l~E~~v~~ytr~iL~GL~ylH----s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 100 GGSLSDLIKRYGG----KLPEPLVRRYTRQILEGLAYLH----SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred CCcHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHH----hCCEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 9999999987642 5999999999999999999999 899999999999999999 79999999999986652
Q ss_pred -------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 518 -------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 518 -------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
....||+.|||||++.. +.....++||||+||++.||+||++||... .....++-.+..+.
T Consensus 172 ~~~~~~~~~~~Gtp~~maPEvi~~-g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----------~~~~~~~~~ig~~~ 239 (313)
T KOG0198|consen 172 GTKSDSELSVQGTPNYMAPEVIRN-GEVARRESDIWSLGCTVVEMLTGKPPWSEF-----------FEEAEALLLIGRED 239 (313)
T ss_pred cccccccccccCCccccCchhhcC-CCcCCccchhhhcCCEEEeccCCCCcchhh-----------cchHHHHHHHhccC
Confidence 25678999999998764 333446999999999999999999999642 11222332222222
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
....+ +..+. ....+++.+|+..||++||||.|+++.---
T Consensus 240 ~~P~i-------p~~ls---~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 240 SLPEI-------PDSLS---DEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred CCCCC-------CcccC---HHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 11111 11222 345566779999999999999999876543
No 22
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-42 Score=354.50 Aligned_cols=251 Identities=27% Similarity=0.402 Sum_probs=202.8
Q ss_pred HHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.+.||+|+||+||+|++.+ .||||.++.... +..+.|++|+..+++-+|.||+-++|||..+.. .||+.+|+|
T Consensus 395 ~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeG 471 (678)
T KOG0193|consen 395 LLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEG 471 (678)
T ss_pred hccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccC
Confidence 467899999999999999873 589999985443 356789999999999999999999999998877 999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
-+|+.++|..+ ..++..+.+.||+|||+|+.||| .++|||||||..||++.+++++||+|||++..-..
T Consensus 472 sSLY~hlHv~e----tkfdm~~~idIAqQiaqGM~YLH----AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g 543 (678)
T KOG0193|consen 472 SSLYTHLHVQE----TKFDMNTTIDIAQQIAQGMDYLH----AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSG 543 (678)
T ss_pred chhhhhccchh----hhhhHHHHHHHHHHHHHhhhhhh----hhhhhhhhccccceEEccCCcEEEecccceeeeeeecc
Confidence 99999999765 56999999999999999999999 89999999999999999999999999999854321
Q ss_pred ----CCCCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 518 ----STVPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 518 ----~~~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
....+..-|||||++.. +...|++.+||||||+|+|||+||..||.... .+.+. ..+-+....
T Consensus 544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~-~dqIi-----------fmVGrG~l~ 611 (678)
T KOG0193|consen 544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN-RDQII-----------FMVGRGYLM 611 (678)
T ss_pred ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC-hhheE-----------EEecccccC
Confidence 13345667999999864 36789999999999999999999999998332 22110 000000000
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
. | +. .....+.+++.+|+..||..++++||.+.+|+..|+++..
T Consensus 612 p---d--~s--~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 612 P---D--LS--KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred c---c--ch--hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 0 0 00 1113345578888889999999999999999999998875
No 23
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-41 Score=379.00 Aligned_cols=256 Identities=28% Similarity=0.428 Sum_probs=209.2
Q ss_pred HhcccCcCCeEEEEEEEEcC--Cc----EEEEEEcccC-CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVLDD--GS----VVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~--g~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
....||+|+||.||+|.+.+ |. .||||.+++. +.+...+|.+|..+|++++|||||+++|+|.+....++++|
T Consensus 696 l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~le 775 (1025)
T KOG1095|consen 696 LLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLE 775 (1025)
T ss_pred eeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEeh
Confidence 45789999999999999653 43 4999999865 45567899999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 437 YMPNGSLFWLLHGNRGP--GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
||++|+|..+|+..+.. ....++....+.++.|||+|+.||+ +.++|||||.++|+|+++...+||+|||+|+.
T Consensus 776 yM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe----~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArD 851 (1025)
T KOG1095|consen 776 YMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE----SKHFVHRDLAARNCLLDERRVVKIADFGLARD 851 (1025)
T ss_pred hcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH----hCCCcCcchhhhheeecccCcEEEcccchhHh
Confidence 99999999999977432 2356899999999999999999999 89999999999999999999999999999996
Q ss_pred CCCCCCCC-------CCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 515 APPSTVPR-------SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 515 ~~~~~~~~-------t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
+....+.+ ...|||||.+. .+.++.|+|||||||++||++| |..||.... -.+.....
T Consensus 852 iy~~~yyr~~~~a~lPvkWm~PEsl~--d~iFtskSDvWsFGVllWEifslG~~PY~~~~------------n~~v~~~~ 917 (1025)
T KOG1095|consen 852 IYDKDYYRKHGEAMLPVKWMPPESLK--DGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS------------NFEVLLDV 917 (1025)
T ss_pred hhhchheeccCccccceecCCHHHHh--hcccccccchhhhHHHHHHHHhCCCCCCCCcc------------hHHHHHHH
Confidence 65442221 24699999765 4799999999999999999999 788885432 22222222
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSP 648 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 648 (672)
.+.+ +.+....+...+.+++..||+.+|++||++..+++.+..+.......
T Consensus 918 ~~gg-----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~ 968 (1025)
T KOG1095|consen 918 LEGG-----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGT 968 (1025)
T ss_pred HhCC-----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccC
Confidence 2222 11222345567889999999999999999999999999987544433
No 24
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=340.85 Aligned_cols=255 Identities=25% Similarity=0.368 Sum_probs=205.5
Q ss_pred HHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.++||+|-||.|.++....+..||||+++..... .+.+|.+|+++|.+++|||||+++|+|..++..++|+|||++|
T Consensus 541 ~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnG 620 (807)
T KOG1094|consen 541 RFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENG 620 (807)
T ss_pred ehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcC
Confidence 357899999999999999998899999999975544 4589999999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCCCC
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVP 521 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 521 (672)
+|.+++..+..+ .+.-....+|+.|||.|++||. +.++|||||.++|+|+|+++++||+|||+++-+....+.
T Consensus 621 DLnqFl~aheap---t~~t~~~vsi~tqiasgmaYLe----s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 621 DLNQFLSAHELP---TAETAPGVSICTQIASGMAYLE----SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred cHHHHHHhccCc---ccccchhHHHHHHHHHHHHHHH----hhchhhccccccceeecCcccEEecCcccccccccCCce
Confidence 999999877532 2455667789999999999999 899999999999999999999999999999976655333
Q ss_pred C-------CCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 522 R-------SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT--GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 522 ~-------t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t--g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
. ..+|||||.+. .+++|+++|||+||+.+||+++ ...||....++ +.++-.....+....
T Consensus 694 ~vqgr~vlpiRwmawEsil--lgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e---------~vven~~~~~~~~~~ 762 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESIL--LGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE---------QVVENAGEFFRDQGR 762 (807)
T ss_pred eeecceeeeeeehhHHHHH--hccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH---------HHHHhhhhhcCCCCc
Confidence 2 35799999664 5689999999999999999976 67788643321 122222222222211
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
..+. ....-+..++.+++.+||+.|-++||+++++...|++..
T Consensus 763 ~~~l-------~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 763 QVVL-------SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred ceec-------cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 1111 111234567889999999999999999999999988753
No 25
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.4e-40 Score=347.29 Aligned_cols=253 Identities=25% Similarity=0.399 Sum_probs=196.3
Q ss_pred HHhcccCcCCeEEEEEEEE------cCCcEEEEEEcccCCc-chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCC-eEEE
Q 005880 363 ASAEMLGKGGFGTAYKAVL------DDGSVVAVKRLKDASI-GGKREFEQHMEVLGRL-RHPNLVGLKAYYFARE-EKLL 433 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-~~~l 433 (672)
.+.+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|++++.++ +||||+++++++...+ ..++
T Consensus 10 ~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~l 89 (338)
T cd05102 10 RLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMV 89 (338)
T ss_pred eeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEE
Confidence 4567899999999999974 2356899999975432 2456789999999999 8999999999887644 5789
Q ss_pred EEeecCCCChhHHhhcCCCC---------------------------------------------------------CCC
Q 005880 434 VSEYMPNGSLFWLLHGNRGP---------------------------------------------------------GRT 456 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~---------------------------------------------------------~~~ 456 (672)
||||+++|+|.+++...... ...
T Consensus 90 v~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (338)
T cd05102 90 IVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKS 169 (338)
T ss_pred EEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccC
Confidence 99999999999999753210 023
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-------CCCCCCcccCC
Q 005880 457 PLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-------TVPRSNGYRAP 529 (672)
Q Consensus 457 ~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aP 529 (672)
++++.++..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++..... ...++..|+||
T Consensus 170 ~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP 245 (338)
T cd05102 170 PLTMEDLICYSFQVARGMEFLA----SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAP 245 (338)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH----HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCc
Confidence 5889999999999999999999 789999999999999999999999999999765322 22345679999
Q ss_pred CccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHH
Q 005880 530 ELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEE 608 (672)
Q Consensus 530 E~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (672)
|++. +..++.++|||||||++|||++ |..||...... ..... ........ .. ...
T Consensus 246 E~~~--~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-----------~~~~~-~~~~~~~~--------~~--~~~ 301 (338)
T cd05102 246 ESIF--DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-----------EEFCQ-RLKDGTRM--------RA--PEN 301 (338)
T ss_pred HHhh--cCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-----------HHHHH-HHhcCCCC--------CC--CCC
Confidence 9764 4578999999999999999997 99998643211 11111 11111100 00 011
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 609 EMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 609 ~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
....+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 302 ~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 302 ATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 23457889999999999999999999999998764
No 26
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-40 Score=328.26 Aligned_cols=257 Identities=25% Similarity=0.387 Sum_probs=198.3
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcC--CCCCceeeeEEEEEcCC----eEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGR--LRHPNLVGLKAYYFARE----EKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~lv~e~~ 438 (672)
.+.||+|+||.||+|.++ |+.||||++... +++.+.+|.++.+. |+|+||+.+++....+. +.|||++|.
T Consensus 216 ~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYH 291 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYH 291 (513)
T ss_pred EEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecc
Confidence 478999999999999999 899999999644 45667777777665 59999999999876543 678999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh----CCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT----CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~----~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
+.|+|+|+|..+ .++....++++..+|.||+|||.. ..++.|.|||||+.||||..++.+.|+|+|+|..
T Consensus 292 e~GSL~DyL~r~------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 292 EHGSLYDYLNRN------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred cCCcHHHHHhhc------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 999999999764 489999999999999999999953 2467799999999999999999999999999965
Q ss_pred CCC---------CCCCCCCcccCCCccccCCC----CCCchhHHHHHHHHHHHHHh----------CCCCCCCCCCCCCC
Q 005880 515 APP---------STVPRSNGYRAPELSSSDGR----KQSQKSDVYSFGVLLLELLT----------GKCPSVIDGGGAGM 571 (672)
Q Consensus 515 ~~~---------~~~~~t~~y~aPE~l~~~~~----~~~~~~DV~S~Gvvl~el~t----------g~~P~~~~~~~~~~ 571 (672)
... ...+||.+|||||++...-. ..-..+||||||.|+||+.. -+.||.+-.+.+
T Consensus 366 h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D-- 443 (513)
T KOG2052|consen 366 HDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD-- 443 (513)
T ss_pred ecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC--
Confidence 433 36789999999998754311 11247899999999999976 245665433221
Q ss_pred CCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 572 GCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
....+. ..+ .-.+.+.|.....-...+.+..+.++++.||..+|..|-|+-.+-+.|.++.+
T Consensus 444 -----Ps~eeM-rkV----VCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 444 -----PSFEEM-RKV----VCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred -----CCHHHH-hcc----eeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 111111 111 01111222222233346788899999999999999999999999999999874
No 27
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-41 Score=342.38 Aligned_cols=235 Identities=25% Similarity=0.426 Sum_probs=196.9
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChhH
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFW 445 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 445 (672)
+-||+|+.|.||+|+++ ++.||||+++... +.+|+-|++|+||||+.|.|+|....-++||||||..|-|+.
T Consensus 130 eWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~ 201 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYE 201 (904)
T ss_pred hhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHH
Confidence 66999999999999998 6889999986432 457888999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----CCC
Q 005880 446 LLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----TVP 521 (672)
Q Consensus 446 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----~~~ 521 (672)
+|+.. .++.......|..+||.|+.||| .++|||||||.-||||+.+..+||+|||-++..... ...
T Consensus 202 VLka~-----~~itp~llv~Wsk~IA~GM~YLH----~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFa 272 (904)
T KOG4721|consen 202 VLKAG-----RPITPSLLVDWSKGIAGGMNYLH----LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFA 272 (904)
T ss_pred HHhcc-----CccCHHHHHHHHHHhhhhhHHHH----HhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhh
Confidence 99865 45888999999999999999999 889999999999999999999999999998765543 567
Q ss_pred CCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhc
Q 005880 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELM 601 (672)
Q Consensus 522 ~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (672)
||..|||||++. ....++|+||||||||||||+||..||..-.....+ . . +.....
T Consensus 273 GTVaWMAPEvIr--nePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII----------------w-----G-VGsNsL 328 (904)
T KOG4721|consen 273 GTVAWMAPEVIR--NEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII----------------W-----G-VGSNSL 328 (904)
T ss_pred hhHhhhCHHHhh--cCCcccccceehhHHHHHHHHhcCCCccccchheeE----------------E-----e-ccCCcc
Confidence 899999999875 568999999999999999999999999643221100 0 0 011111
Q ss_pred cccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 602 RYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 602 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
..+....++..+.-|+++||+..|..||++.+++..|+-.
T Consensus 329 ~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 329 HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred cccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 2233355666788889999999999999999999988653
No 28
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=340.45 Aligned_cols=239 Identities=25% Similarity=0.353 Sum_probs=195.7
Q ss_pred HhcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcc---hHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIG---GKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
+++.||+|+|++||+|+ .++++.+|||++.+..+- ..+.+..|-.+|.+| .||.|++|+..|.++...|+|+||+
T Consensus 77 Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A 156 (604)
T KOG0592|consen 77 FGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYA 156 (604)
T ss_pred hhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEec
Confidence 45779999999999999 557999999999754332 234567788889999 8999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.++|+... .+++.....++.+|+.||+||| ++|||||||||+|||+|+|+++||.|||.|+.+.+.
T Consensus 157 ~nGdll~~i~K~G-----sfde~caR~YAAeIldAleylH----~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 157 PNGDLLDLIKKYG-----SFDETCARFYAAEILDALEYLH----SNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred CCCcHHHHHHHhC-----cchHHHHHHHHHHHHHHHHHHH----hcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 9999999998764 4999999999999999999999 899999999999999999999999999999876431
Q ss_pred ------------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChh
Q 005880 519 ------------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLP 580 (672)
Q Consensus 519 ------------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~ 580 (672)
..+||..|.+||++. ....++.+|||+||||+|.|+.|++||...++.
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~--~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney------------ 293 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLN--DSPAGPSSDLWALGCILYQMLAGQPPFRAANEY------------ 293 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhc--CCCCCcccchHHHHHHHHHHhcCCCCCccccHH------------
Confidence 356889999999875 568899999999999999999999999754321
Q ss_pred HHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 581 RWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 581 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
-.++.++.- ...-.++.. ....+|+.+.|..||.+|+|.+|+-+.
T Consensus 294 liFqkI~~l---------~y~fp~~fp---~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 294 LIFQKIQAL---------DYEFPEGFP---EDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HHHHHHHHh---------cccCCCCCC---HHHHHHHHHHHccCccccccHHHHhhC
Confidence 122222221 111112222 345677779999999999999888653
No 29
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-40 Score=357.99 Aligned_cols=257 Identities=25% Similarity=0.326 Sum_probs=210.0
Q ss_pred HHHhcccCcCCeEEEEEEEEcCC-cEEEEEEcccCCcchHHHHHHHHHHHcCCC-CCceeeeEE-EEEc------CCeEE
Q 005880 362 RASAEMLGKGGFGTAYKAVLDDG-SVVAVKRLKDASIGGKREFEQHMEVLGRLR-HPNLVGLKA-YYFA------REEKL 432 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~~~~g-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~-~~~~------~~~~~ 432 (672)
..+.+.|.+|||+.||.|....+ ..||+|++-..+....+...+|+++|++|+ |+|||.+++ .... ..+.+
T Consensus 39 v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evl 118 (738)
T KOG1989|consen 39 VTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVL 118 (738)
T ss_pred EEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEE
Confidence 34457899999999999997765 999999998777777889999999999997 999999999 3332 23678
Q ss_pred EEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCC
Q 005880 433 LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS 512 (672)
Q Consensus 433 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a 512 (672)
|.||||.+|.|-+++..... ..+++.++++|+.|+++|+++||.. ..+|||||||-+||||+.+++.||||||.|
T Consensus 119 lLmEyC~gg~Lvd~mn~Rlq---~~lte~eVLkIf~dv~~AVa~mH~~--~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 119 LLMEYCKGGSLVDFMNTRLQ---TRLTEDEVLKIFYDVCEAVAAMHYL--KPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eehhhccCCcHHHHHHHHHh---ccCChHHHHHHHHHHHHHHHHHhcC--CCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 99999999999999975542 3499999999999999999999954 678999999999999999999999999998
Q ss_pred ccCCCC--------------CCCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCC
Q 005880 513 IFAPPS--------------TVPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAV 577 (672)
Q Consensus 513 ~~~~~~--------------~~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~ 577 (672)
...... ...-|+.|+|||++.. .+...++|+|||||||+||-|+....||+..+.-
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--------- 264 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--------- 264 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce---------
Confidence 543221 2345789999997643 3678899999999999999999999999754221
Q ss_pred ChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCCC
Q 005880 578 DLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPC 649 (672)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~ 649 (672)
.+++.... .+........|.+||+.||+.||.+||++-+|+..+.++.....+..
T Consensus 265 ----------------aIlng~Y~-~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~ 319 (738)
T KOG1989|consen 265 ----------------AILNGNYS-FPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIP 319 (738)
T ss_pred ----------------eEEecccc-CCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCcc
Confidence 22222222 12224566788999999999999999999999999999987665554
No 30
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=340.25 Aligned_cols=246 Identities=27% Similarity=0.392 Sum_probs=199.8
Q ss_pred hcccCcCCeEEEEEEE-EcCCcEEEEEEcccC----Cc-chHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDA----SI-GGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.||+|.||.||.|. ..+|+.||+|++... .. ...+.+.+|+.++++++ ||||++++.++......++||||
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy 101 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEY 101 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEe
Confidence 4679999999999998 457899999977653 11 23556778999999998 99999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC-CcEEEeccCCCccCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT-GNARVSDFGLSIFAP 516 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~-~~~kl~DfG~a~~~~ 516 (672)
+.+|+|.+++... .++.+....++++|++.|++|+| +++|+||||||+|||++.+ +++||+|||++....
T Consensus 102 ~~gGdL~~~i~~~-----g~l~E~~ar~~F~Qlisav~y~H----~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 102 CSGGDLFDYIVNK-----GRLKEDEARKYFRQLISAVAYCH----SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred cCCccHHHHHHHc-----CCCChHHHHHHHHHHHHHHHHHH----hCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 9999999999863 35888999999999999999999 8999999999999999999 999999999998772
Q ss_pred -C----CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 517 -P----STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 517 -~----~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
. .+.+||+.|+|||++......-+.++||||+||+||.|++|+.||+.. +.+.....+.+...
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~------------~~~~l~~ki~~~~~ 240 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS------------NVPNLYRKIRKGEF 240 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc------------cHHHHHHHHhcCCc
Confidence 2 277899999999998754334468999999999999999999999753 22233333222211
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.-+.... ..++..++.+|+..||.+|+|+.|++ .-.-++.
T Consensus 241 ---------~~p~~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~~ 280 (370)
T KOG0583|consen 241 ---------KIPSYLL--SPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQK 280 (370)
T ss_pred ---------cCCCCcC--CHHHHHHHHHHcCCCcccCCCHHHHh-hChhhcc
Confidence 1111110 34567888899999999999999998 5454443
No 31
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.3e-40 Score=337.33 Aligned_cols=238 Identities=26% Similarity=0.420 Sum_probs=201.8
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
...+.||+|.||.||||+.+ +.+.||+|.+.+... .+.+.+.+|++++++++|||||.++++|+...+.|+|+||+.
T Consensus 5 hv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~ 84 (808)
T KOG0597|consen 5 HVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAV 84 (808)
T ss_pred hHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhh
Confidence 34577999999999999955 689999999875433 345678999999999999999999999999999999999996
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+ +|+.+|.... .++++.+..|+.+++.||.||| +++|+|||+||.|||++..+.+|++|||+|+.....
T Consensus 85 g-~L~~il~~d~-----~lpEe~v~~~a~~LVsaL~yLh----s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t 154 (808)
T KOG0597|consen 85 G-DLFTILEQDG-----KLPEEQVRAIAYDLVSALYYLH----SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT 154 (808)
T ss_pred h-hHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHH----hcCcccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence 6 9999998654 4999999999999999999999 899999999999999999999999999999988765
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...||+-|||||+.. +..|+..+|+||+|||+||+++|++||.. ..+.+.++.+..+...
T Consensus 155 ~vltsikGtPlYmAPElv~--e~pyd~~sDlWslGcilYE~~~G~PPF~a------------~si~~Lv~~I~~d~v~-- 218 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVE--EQPYDHTSDLWSLGCILYELYVGQPPFYA------------RSITQLVKSILKDPVK-- 218 (808)
T ss_pred eeeeeccCcccccCHHHHc--CCCccchhhHHHHHHHHHHHhcCCCCchH------------HHHHHHHHHHhcCCCC--
Confidence 456899999999764 77999999999999999999999999973 3445555555444211
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
. .......+..++...+.+||.+|.|..+++.
T Consensus 219 -------~---p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 219 -------P---PSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred -------C---cccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 1 1233345677777999999999999999874
No 32
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-40 Score=344.59 Aligned_cols=252 Identities=32% Similarity=0.423 Sum_probs=204.3
Q ss_pred HhcccCcCCeEEEEEEEEcC--C--cE-EEEEEccc---CCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLDD--G--SV-VAVKRLKD---ASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~--g--~~-vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 435 (672)
..++||+|+||.||+|++.. + .. ||||..+. .......+|.+|.++|++++|||||+++|++..+...++||
T Consensus 161 l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivm 240 (474)
T KOG0194|consen 161 LGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVM 240 (474)
T ss_pred ccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEE
Confidence 34899999999999999653 2 23 89999884 33446789999999999999999999999999999999999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
|+|.||+|.++|+... ..++..++.+++.++|.||+||| +.++|||||.++|+|++.++.+||+|||+++..
T Consensus 241 El~~gGsL~~~L~k~~----~~v~~~ek~~~~~~AA~Gl~YLh----~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 241 ELCNGGSLDDYLKKNK----KSLPTLEKLRFCYDAARGLEYLH----SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred EecCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHhHHHHHH----HCCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 9999999999998765 25999999999999999999999 899999999999999999999999999999866
Q ss_pred CCC-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 516 PPS-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 516 ~~~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
..- ...-...|+|||.+. ...+++++|||||||++||+++ |..||.+. ...+....+..+
T Consensus 313 ~~~~~~~~~~klPirWLAPEtl~--~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~------------~~~~v~~kI~~~ 378 (474)
T KOG0194|consen 313 SQYVMKKFLKKLPIRWLAPETLN--TGIFSFKTDVWSFGVLLWEIFENGAEPYPGM------------KNYEVKAKIVKN 378 (474)
T ss_pred cceeeccccccCcceecChhhhc--cCccccccchhheeeeEEeeeccCCCCCCCC------------CHHHHHHHHHhc
Confidence 521 111235799999765 4599999999999999999999 78898643 222333333233
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVS 647 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 647 (672)
+..... . ......+..++.+||..+|++||+|.++.+.|+.+......
T Consensus 379 ~~r~~~-------~---~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 379 GYRMPI-------P---SKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred CccCCC-------C---CCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 221111 1 12334566777799999999999999999999999876554
No 33
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-40 Score=307.67 Aligned_cols=255 Identities=23% Similarity=0.306 Sum_probs=206.3
Q ss_pred HhcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC-----eEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE-----EKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~ 437 (672)
+.+.||+|||+.||.++ ..++..+|+|++.....++.+..++|++..++++||||++++++...+. +.|++++|
T Consensus 25 i~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Py 104 (302)
T KOG2345|consen 25 IQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPY 104 (302)
T ss_pred EeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeeh
Confidence 35779999999999999 7789999999998887778889999999999999999999999876443 48999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
...|+|.+.+..... +...+++.+++.|+.++++||.+||.. ..+++||||||.||++++++.++|.|||.+....-
T Consensus 105 y~~Gsl~d~i~~~k~-kg~~~sE~~iL~if~gic~gL~~lH~~--~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i 181 (302)
T KOG2345|consen 105 YKRGSLLDEIERLKI-KGNFVSEAQILWIFLGICRGLEALHEK--EPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPI 181 (302)
T ss_pred hccccHHHHHHHHhh-cCCccCHHHHHHHHHHHHHHHHHHhcc--CCcccccCCCcceeEecCCCceEEEeccCccccce
Confidence 999999999976553 335699999999999999999999944 34699999999999999999999999999875542
Q ss_pred C--------------CCCCCCcccCCCccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHH
Q 005880 518 S--------------TVPRSNGYRAPELSSSD-GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRW 582 (672)
Q Consensus 518 ~--------------~~~~t~~y~aPE~l~~~-~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 582 (672)
. ....|..|+|||++.-. +...++++|||||||++|+|+.|..||+...+.
T Consensus 182 ~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~-------------- 247 (302)
T KOG2345|consen 182 QIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ-------------- 247 (302)
T ss_pred EeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc--------------
Confidence 1 23357889999987543 567789999999999999999999999754321
Q ss_pred HHHHHhhhcc-ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 583 VQSVVREEWT-AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 583 ~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
.+.. ..+...... .+......+.+.+++..|++.||.+||++.+++..++.+.
T Consensus 248 ------GgSlaLAv~n~q~s-~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 248 ------GGSLALAVQNAQIS-IPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ------CCeEEEeeeccccc-cCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1111 111111111 1112225567889999999999999999999999988753
No 34
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.8e-39 Score=312.09 Aligned_cols=194 Identities=27% Similarity=0.372 Sum_probs=169.1
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEc--CCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFA--REEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~ 438 (672)
..+.|++|.||.||+|+. ++++.||+|+++.... +-.-.-.+||.+|.+++|||||.+-.+... -+..|+|||||
T Consensus 80 ~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~ 159 (419)
T KOG0663|consen 80 KLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYV 159 (419)
T ss_pred HHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHH
Confidence 458899999999999995 4789999999985432 223456899999999999999999888764 35789999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
+. +|..+++... .++...++.-+..|+++|++||| .+.|+|||||++|+|++..|.+||+|||+|+.+...
T Consensus 160 Eh-DLksl~d~m~----q~F~~~evK~L~~QlL~glk~lH----~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 160 EH-DLKSLMETMK----QPFLPGEVKTLMLQLLRGLKHLH----DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred Hh-hHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHh----hceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 87 9999998765 57999999999999999999999 889999999999999999999999999999988765
Q ss_pred -----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Q 005880 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGG 567 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~ 567 (672)
..+.|..|+|||++.. ...|+++.|+||+|||+.||+++++-|.+..+
T Consensus 231 ~k~~T~lVVTLWYRaPELLLG-~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE 283 (419)
T KOG0663|consen 231 LKPYTPLVVTLWYRAPELLLG-AKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE 283 (419)
T ss_pred cccCcceEEEeeecCHHHhcC-CcccCcchhhhhHHHHHHHHHhcCCCCCCCch
Confidence 3445789999998864 57899999999999999999999999976653
No 35
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.1e-38 Score=331.62 Aligned_cols=255 Identities=24% Similarity=0.353 Sum_probs=194.5
Q ss_pred HhcccCcCCeEEEEEEEEcC-----------------CcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLDD-----------------GSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYY 425 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~ 425 (672)
+.+.||+|+||.||+|..++ +..||+|.++.... ....+|.+|++++.+++||||+++++++
T Consensus 9 ~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 88 (304)
T cd05096 9 FKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVC 88 (304)
T ss_pred eeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE
Confidence 35789999999999998532 34799999876432 2456799999999999999999999999
Q ss_pred EcCCeEEEEEeecCCCChhHHhhcCCC--------------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCC
Q 005880 426 FAREEKLLVSEYMPNGSLFWLLHGNRG--------------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNI 491 (672)
Q Consensus 426 ~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dl 491 (672)
.+.+..++||||+++|+|.+++..... .....++|..+++++.|+++||+||| +.+|+||||
T Consensus 89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~ivH~dl 164 (304)
T cd05096 89 VDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS----SLNFVHRDL 164 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH----HCCccccCc
Confidence 999999999999999999999865321 11235789999999999999999999 789999999
Q ss_pred CCCCEEeCCCCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh--CCCCC
Q 005880 492 KSTNVLLDKTGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT--GKCPS 562 (672)
Q Consensus 492 kp~NIll~~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t--g~~P~ 562 (672)
||+||++++++.+||+|||+++..... ...++..|+|||++. +..++.++||||||+++|||++ +..||
T Consensus 165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~~~~~~~p~ 242 (304)
T cd05096 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECIL--MGKFTTASDVWAFGVTLWEILMLCKEQPY 242 (304)
T ss_pred chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHh--cCCCCchhhhHHHHHHHHHHHHccCCCCC
Confidence 999999999999999999999765432 223366899999764 4578999999999999999987 55666
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 563 VIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
..... ......+....+........ ... ......+.+++.+||+.||++|||+.||.+.|++
T Consensus 243 ~~~~~---------~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 243 GELTD---------EQVIENAGEFFRDQGRQVYL----FRP---PPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CcCCH---------HHHHHHHHHHhhhccccccc----cCC---CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 53221 11222222221111100000 001 1223467889999999999999999999998863
No 36
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2e-38 Score=322.91 Aligned_cols=246 Identities=22% Similarity=0.341 Sum_probs=196.3
Q ss_pred HHhcccCcCCeEEEEEEEEc----CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 363 ASAEMLGKGGFGTAYKAVLD----DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.+.||+|+||.||+|.+. .+..||+|+++.... .....+.+|+.++.+++||||+++++++..++..++||||
T Consensus 8 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 87 (266)
T cd05064 8 KIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEY 87 (266)
T ss_pred EEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEe
Confidence 34578999999999999853 357899999986432 2346789999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++|+|.+++.... ..+++.+++.++.|++.||+||| +.+++||||||+||+++.++.+|++|||.+.....
T Consensus 88 ~~~~~L~~~l~~~~----~~l~~~~~~~~~~~i~~al~~lH----~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 88 MSNGALDSFLRKHE----GQLVAGQLMGMLPGLASGMKYLS----EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred CCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH----HCCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 99999999997543 35899999999999999999999 78999999999999999999999999998765432
Q ss_pred C------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 518 S------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 518 ~------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
. ...++..|+|||++. +..++.++|||||||++||+++ |+.||.... ..+...... +.
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~------------~~~~~~~~~-~~ 224 (266)
T cd05064 160 EAIYTTMSGKSPVLWAAPEAIQ--YHHFSSASDVWSFGIVMWEVMSYGERPYWDMS------------GQDVIKAVE-DG 224 (266)
T ss_pred cchhcccCCCCceeecCHHHHh--hCCccchhHHHHHHHHHHHHhcCCCCCcCcCC------------HHHHHHHHH-CC
Confidence 2 122346799999764 5678999999999999999775 999996432 112222221 11
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
.. .+........+.+++.+||+.+|.+||++.|+.+.|+.+
T Consensus 225 ~~----------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 225 FR----------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CC----------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 10 011122344678888999999999999999999998765
No 37
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.1e-38 Score=319.58 Aligned_cols=240 Identities=26% Similarity=0.437 Sum_probs=195.5
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
.+.||+|+||.||++..+++..+|+|.++.... ...++.+|++++++++||||+++++++..++..++||||+++|+|.
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 87 (256)
T cd05114 9 MKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM-SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLL 87 (256)
T ss_pred eeEecCCcCceEEEEEeccCceEEEEecccCCc-cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHH
Confidence 467999999999999988888999999875433 4567899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC------
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS------ 518 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~------ 518 (672)
++++... ..+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||.++.....
T Consensus 88 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05114 88 NYLRQRQ----GKLSKDMLLSMCQDVCEGMEYLE----RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS 159 (256)
T ss_pred HHHHhCc----cCCCHHHHHHHHHHHHHHHHHHH----HCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence 9997543 24899999999999999999999 789999999999999999999999999998765432
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||++. +..++.++||||||+++|||++ |+.||... +..+.+........ ...
T Consensus 160 ~~~~~~~y~aPE~~~--~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~------------~~~~~~~~i~~~~~---~~~ 222 (256)
T cd05114 160 GAKFPVKWSPPEVFN--FSKYSSKSDVWSFGVLMWEVFTEGKMPFEKK------------SNYEVVEMISRGFR---LYR 222 (256)
T ss_pred CCCCchhhCChhhcc--cCccchhhhhHHHHHHHHHHHcCCCCCCCCC------------CHHHHHHHHHCCCC---CCC
Confidence 122345799999764 4578899999999999999999 89998643 22223333222211 001
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 638 (672)
+ ......+.+++.+||+.+|.+||++.|+++.|
T Consensus 223 ~--------~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 P--------KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred C--------CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1 11224578899999999999999999999886
No 38
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.8e-38 Score=339.05 Aligned_cols=251 Identities=26% Similarity=0.401 Sum_probs=196.2
Q ss_pred HHhcccCcCCeEEEEEEEE------cCCcEEEEEEcccCC-cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEE
Q 005880 363 ASAEMLGKGGFGTAYKAVL------DDGSVVAVKRLKDAS-IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLV 434 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 434 (672)
.+.+.||+|+||.||+|+. .++..||||+++... ....+.+.+|++++..+ +||||+++++++.+.+..++|
T Consensus 38 ~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv 117 (375)
T cd05104 38 SFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVI 117 (375)
T ss_pred ehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceee
Confidence 4578999999999999973 235689999997533 23456788999999999 899999999999999999999
Q ss_pred EeecCCCChhHHhhcCCC--------------------------------------------------------------
Q 005880 435 SEYMPNGSLFWLLHGNRG-------------------------------------------------------------- 452 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~-------------------------------------------------------------- 452 (672)
|||+++|+|.++++....
T Consensus 118 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (375)
T cd05104 118 TEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQ 197 (375)
T ss_pred ehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceeccc
Confidence 999999999999865321
Q ss_pred --------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC------
Q 005880 453 --------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS------ 518 (672)
Q Consensus 453 --------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~------ 518 (672)
.....+++..+.+++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 198 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 273 (375)
T cd05104 198 DVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA----SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVK 273 (375)
T ss_pred ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCchhhEEEECCCcEEEecCccceeccCccccccc
Confidence 01135889999999999999999999 789999999999999999999999999999765432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++. +..++.++|||||||++|||++ |..||...... ..+. ....+.....
T Consensus 274 ~~~~~~~~y~aPE~~~--~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-----------~~~~-~~~~~~~~~~-- 337 (375)
T cd05104 274 GNARLPVKWMAPESIF--NCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-----------SKFY-KMIKEGYRML-- 337 (375)
T ss_pred CCCCCCcceeChhHhc--CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-----------HHHH-HHHHhCccCC--
Confidence 122345799999764 5678999999999999999998 88888643211 1111 1112111000
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
... ....++.+++.+||+.||++||++.||++.|++.
T Consensus 338 -----~~~---~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 338 -----SPE---CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -----CCC---CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 001 1123578889999999999999999999999863
No 39
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-39 Score=335.94 Aligned_cols=239 Identities=28% Similarity=0.432 Sum_probs=201.1
Q ss_pred hcccCcCCeEEEEEEE-EcCCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
++.||+|+.|.|.+|+ ..+|+.+|||++.+.. ......+++|+-+|+-+.||||+++++++.+..+.|+|.||+++
T Consensus 17 gkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~g 96 (786)
T KOG0588|consen 17 GKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPG 96 (786)
T ss_pred cccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCC
Confidence 5789999999999999 5689999999997652 22356789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|.|++++-.. .++.+.+..+++.||+.|+.|.| ..+|+||||||+|+|+|..+++||+|||+|....++
T Consensus 97 GELFdylv~k-----G~l~e~eaa~ff~QIi~gv~yCH----~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl 167 (786)
T KOG0588|consen 97 GELFDYLVRK-----GPLPEREAAHFFRQILDGVSYCH----AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL 167 (786)
T ss_pred chhHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHh----hhcceeccCCchhhhhhcccCEeeeccceeecccCCcc
Confidence 9999999755 35899999999999999999999 889999999999999999999999999999877665
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
+.+|++.|+|||++.+. ...+.++||||+|||||.|+||+.||+++ ++...+.++.++.+..
T Consensus 168 LeTSCGSPHYA~PEIV~G~-pYdG~~sDVWSCGVILfALLtG~LPFdDd------------Nir~LLlKV~~G~f~M--- 231 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGR-PYDGRPSDVWSCGVILFALLTGKLPFDDD------------NIRVLLLKVQRGVFEM--- 231 (786)
T ss_pred ccccCCCcccCCchhhcCC-CCCCCccccchhHHHHHHHHhCCCCCCCc------------cHHHHHHHHHcCcccC---
Confidence 78899999999998643 45578999999999999999999999843 3444444444443210
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
+..+. .+..+|+.+|+..||+.|.|++||++-
T Consensus 232 ------Ps~Is---~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 232 ------PSNIS---SEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ------CCcCC---HHHHHHHHHHhccCccccccHHHHhhC
Confidence 12222 345567779999999999999999753
No 40
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-39 Score=299.57 Aligned_cols=249 Identities=28% Similarity=0.435 Sum_probs=205.3
Q ss_pred cccCHHHHHHHHhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCCCCceeeeEEEEEcC
Q 005880 353 KRFELEDLLRASAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLKAYYFAR 428 (672)
Q Consensus 353 ~~~~~~~l~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 428 (672)
+.++++|. .+++.||+|.||.||.|+. +++..||+|++.+.... -.+++.+|+++-+.|+||||+++++||.+.
T Consensus 17 ~~~~l~df--eigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~ 94 (281)
T KOG0580|consen 17 KTWTLDDF--EIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS 94 (281)
T ss_pred cccchhhc--cccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc
Confidence 45666665 4678899999999999994 56889999999764432 467899999999999999999999999999
Q ss_pred CeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEec
Q 005880 429 EEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSD 508 (672)
Q Consensus 429 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 508 (672)
...||++||..+|.+...|...+. ..+++.....+..|+|.||.|+| ..+||||||||+|+|++.++..||+|
T Consensus 95 ~riyLilEya~~gel~k~L~~~~~---~~f~e~~~a~Yi~q~A~Al~y~h----~k~VIhRdiKpenlLlg~~~~lkiAd 167 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGRM---KRFDEQRAATYIKQLANALLYCH----LKRVIHRDIKPENLLLGSAGELKIAD 167 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhccc---ccccccchhHHHHHHHHHHHHhc----cCCcccCCCCHHHhccCCCCCeeccC
Confidence 999999999999999999985542 45888889999999999999999 89999999999999999999999999
Q ss_pred cCCCccCCCC---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 005880 509 FGLSIFAPPS---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQS 585 (672)
Q Consensus 509 fG~a~~~~~~---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 585 (672)
||-+...+.. +.+||..|.+|| +..+...+.++|+|++|++.||++.|.+||.....+ +-.++
T Consensus 168 fGwsV~~p~~kR~tlcgt~dyl~pE--mv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~------------etYkr 233 (281)
T KOG0580|consen 168 FGWSVHAPSNKRKTLCGTLDYLPPE--MVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS------------ETYKR 233 (281)
T ss_pred CCceeecCCCCceeeecccccCCHh--hcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH------------HHHHH
Confidence 9998766533 678999999999 556788999999999999999999999999754311 11222
Q ss_pred HHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+.+ .++.++ ..+. ....++|.+|+..+|.+|.+..||++
T Consensus 234 I~k----~~~~~p-----~~is---~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 234 IRK----VDLKFP-----STIS---GGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred HHH----ccccCC-----cccC---hhHHHHHHHHhccCccccccHHHHhh
Confidence 211 122222 2222 34567788999999999999999875
No 41
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.1e-38 Score=334.15 Aligned_cols=236 Identities=24% Similarity=0.338 Sum_probs=190.7
Q ss_pred cccCcCCeEEEEEEEE-cCCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.||+|+||.||+|+. .+|+.||+|+++... ......+.+|++++++++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3689999999999995 468999999987532 223456788999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC----
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP---- 517 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~---- 517 (672)
+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH----~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 151 (323)
T cd05571 81 ELFFHLSRE-----RVFSEDRARFYGAEIVSALGYLH----SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT 151 (323)
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCc
Confidence 999998754 35899999999999999999999 88999999999999999999999999999875322
Q ss_pred -CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 518 -STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 518 -~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
....+|..|+|||++. +..++.++|||||||++|||++|+.||.... ..........+..
T Consensus 152 ~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~elltg~~Pf~~~~------------~~~~~~~~~~~~~----- 212 (323)
T cd05571 152 MKTFCGTPEYLAPEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------------HEKLFELILMEEI----- 212 (323)
T ss_pred ccceecCccccChhhhc--CCCCCccccCcccchhhhhhhcCCCCCCCCC------------HHHHHHHHHcCCC-----
Confidence 1345789999999764 5678999999999999999999999996431 1112222211110
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 636 (672)
.... ....++.+++.+||+.||++|| ++.|+++
T Consensus 213 ----~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 213 ----RFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred ----CCCC---CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 0011 1223567888899999999999 7888875
No 42
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-39 Score=322.54 Aligned_cols=243 Identities=25% Similarity=0.357 Sum_probs=191.6
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc--------------chHHHHHHHHHHHcCCCCCceeeeEEEEEcC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI--------------GGKREFEQHMEVLGRLRHPNLVGLKAYYFAR 428 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--------------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 428 (672)
+...||+|.||.|-+|+. .+++.||||++.+... ...+...+||.+|++++|||||+++.+..+.
T Consensus 101 l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP 180 (576)
T KOG0585|consen 101 LIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDP 180 (576)
T ss_pred hhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCc
Confidence 356799999999999994 4799999999964221 1235789999999999999999999998764
Q ss_pred --CeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEE
Q 005880 429 --EEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARV 506 (672)
Q Consensus 429 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl 506 (672)
+..|||+|||..|.+.+.=. ....+++.+.++++.++..||+||| ..+||||||||+|+|++++|++||
T Consensus 181 ~s~~~YlVley~s~G~v~w~p~-----d~~els~~~Ar~ylrDvv~GLEYLH----~QgiiHRDIKPsNLLl~~~g~VKI 251 (576)
T KOG0585|consen 181 ESDKLYLVLEYCSKGEVKWCPP-----DKPELSEQQARKYLRDVVLGLEYLH----YQGIIHRDIKPSNLLLSSDGTVKI 251 (576)
T ss_pred ccCceEEEEEeccCCccccCCC-----CcccccHHHHHHHHHHHHHHHHHHH----hcCeeccccchhheEEcCCCcEEe
Confidence 57899999999998754422 1123999999999999999999999 789999999999999999999999
Q ss_pred eccCCCccCCCC----------CCCCCCcccCCCccccC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 005880 507 SDFGLSIFAPPS----------TVPRSNGYRAPELSSSD--GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCG 574 (672)
Q Consensus 507 ~DfG~a~~~~~~----------~~~~t~~y~aPE~l~~~--~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~ 574 (672)
+|||.+...... ...||+.|+|||..... ....+.+.||||+||+||.|+.|+.||.++.
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~-------- 323 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF-------- 323 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch--------
Confidence 999998766221 46789999999987653 2345678999999999999999999997653
Q ss_pred CCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 575 GAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
..+.+.++..+. + ..+...+....+.+||.++|.+||++|.+..+|...
T Consensus 324 ----~~~l~~KIvn~p---------L-~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 324 ----ELELFDKIVNDP---------L-EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred ----HHHHHHHHhcCc---------c-cCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 222233332221 1 112223345567888889999999999999998643
No 43
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6.7e-38 Score=322.03 Aligned_cols=249 Identities=26% Similarity=0.390 Sum_probs=197.4
Q ss_pred HHhcccCcCCeEEEEEEEEcC-C-----cEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEE
Q 005880 363 ASAEMLGKGGFGTAYKAVLDD-G-----SVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~-g-----~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 435 (672)
.+.+.||+|+||.||+|.... + ..||+|.++.... ....+|.+|++++.+++||||+++++++...+..+++|
T Consensus 8 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 87 (283)
T cd05048 8 RFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLF 87 (283)
T ss_pred chhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEE
Confidence 345789999999999998543 2 5799999875432 24567899999999999999999999999989999999
Q ss_pred eecCCCChhHHhhcCCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcE
Q 005880 436 EYMPNGSLFWLLHGNRGPG-----------RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNA 504 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~ 504 (672)
||+++|+|.+++....... ...+++.+++.++.|+++||+||| +.+++||||||+||++++++.+
T Consensus 88 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH----~~~i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05048 88 EYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS----SHHFVHRDLAARNCLVGEGLTV 163 (283)
T ss_pred ecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccccceEEEcCCCcE
Confidence 9999999999997643211 145889999999999999999999 7899999999999999999999
Q ss_pred EEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCC
Q 005880 505 RVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGA 576 (672)
Q Consensus 505 kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~ 576 (672)
||+|||+++..... ...++..|+|||.+. +..++.++|||||||++|||++ |..||....
T Consensus 164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~sDv~slG~il~el~~~g~~p~~~~~---------- 231 (283)
T cd05048 164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAIL--YGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS---------- 231 (283)
T ss_pred EECCCcceeeccccccccccCCCcccccccCHHHhc--cCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC----------
Confidence 99999998765332 223456799999654 4578999999999999999998 999986432
Q ss_pred CChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 577 VDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
..+....+. ..... ........++.+++.+||+.||++||++.||++.|+.
T Consensus 232 --~~~~~~~i~-~~~~~----------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 232 --NQEVIEMIR-SRQLL----------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred --HHHHHHHHH-cCCcC----------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 111221111 11110 0112234568889999999999999999999999975
No 44
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.3e-38 Score=337.84 Aligned_cols=253 Identities=26% Similarity=0.366 Sum_probs=196.9
Q ss_pred HHHhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCc-chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEE
Q 005880 362 RASAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASI-GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLL 433 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 433 (672)
+.+.+.||+|+||.||+|+.. ++..||||+++.... .....+.+|+++++.+ +|+||+++++++...+..++
T Consensus 40 ~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~l 119 (374)
T cd05106 40 LQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLV 119 (374)
T ss_pred ceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEE
Confidence 356788999999999999842 235799999975432 2346788999999999 89999999999999999999
Q ss_pred EEeecCCCChhHHhhcCCC-------------------------------------------------------------
Q 005880 434 VSEYMPNGSLFWLLHGNRG------------------------------------------------------------- 452 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~------------------------------------------------------------- 452 (672)
||||+++|+|.++++....
T Consensus 120 v~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (374)
T cd05106 120 ITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKD 199 (374)
T ss_pred eHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccc
Confidence 9999999999999864310
Q ss_pred ----CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-------CCC
Q 005880 453 ----PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-------TVP 521 (672)
Q Consensus 453 ----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-------~~~ 521 (672)
....++++.++++++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++..... ...
T Consensus 200 ~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH----~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~ 275 (374)
T cd05106 200 EEDTEDSWPLDLDDLLRFSSQVAQGMDFLA----SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNAR 275 (374)
T ss_pred hhccCCCCCcCHHHHHHHHHHHHHHHHHHH----HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCC
Confidence 01235889999999999999999999 789999999999999999999999999998765332 122
Q ss_pred CCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhh
Q 005880 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLEL 600 (672)
Q Consensus 522 ~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (672)
++..|+|||++. +..++.++|||||||++|||++ |+.||...... .-......... ...
T Consensus 276 ~~~~y~aPE~~~--~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~------------~~~~~~~~~~~-----~~~- 335 (374)
T cd05106 276 LPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN------------SKFYKMVKRGY-----QMS- 335 (374)
T ss_pred CccceeCHHHhc--CCCCCccccHHHHHHHHHHHHhCCCCCCcccccc------------HHHHHHHHccc-----Ccc-
Confidence 345799999764 4578999999999999999997 99998643211 00111111111 000
Q ss_pred ccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 601 MRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 601 ~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
... ....++.+++.+||+.||++|||+.+|+++|+++.
T Consensus 336 -~~~---~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 336 -RPD---FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -CCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 001 11245788888999999999999999999999875
No 45
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=8.5e-39 Score=324.22 Aligned_cols=242 Identities=34% Similarity=0.549 Sum_probs=188.7
Q ss_pred hcccCcCCeEEEEEEEEc-----CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLD-----DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.+.||.|.||.||+|.+. .+..|+||.++.... ...++|.+|++.+++++||||++++|++...+..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 367999999999999977 357899999975433 34788999999999999999999999999888899999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.++|+... ...+++.++.+|+.|+++||+||| +.+++||||+++||++++++.+||+|||++......
T Consensus 84 ~~g~L~~~L~~~~---~~~~~~~~~~~i~~~i~~~l~~Lh----~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 84 PGGSLDDYLKSKN---KEPLSEQQRLSIAIQIAEALSYLH----SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp TTEBHHHHHHHTC---TTTSBHHHHHHHHHHHHHHHHHHH----HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred ccccccccccccc---cccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccc
Confidence 9999999998762 245899999999999999999999 789999999999999999999999999999876321
Q ss_pred -------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 519 -------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 519 -------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
.......|+|||.+. ...++.++||||||+++|||++ |+.||... +..++........
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~--~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~------------~~~~~~~~~~~~~ 222 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLK--DGEYTKKSDVYSFGMLLYEILTLGKFPFSDY------------DNEEIIEKLKQGQ 222 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHH--HSEESHHHHHHHHHHHHHHHHTTSSGTTTTS------------CHHHHHHHHHTTE
T ss_pred cccccccccccccccccccccc--ccccccccccccccccccccccccccccccc------------ccccccccccccc
Confidence 223456799999764 3458999999999999999999 68887532 3333333332221
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 638 (672)
. .. ........+.+++.+||+.||++|||+.++++.|
T Consensus 223 ~-~~----------~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 223 R-LP----------IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp E-TT----------SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred c-ce----------eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1 11 0111233577888999999999999999999876
No 46
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.6e-38 Score=324.39 Aligned_cols=243 Identities=24% Similarity=0.341 Sum_probs=192.1
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|.. .+|+.||||.+..... .....+.+|++++++++|+||+++++++.+++..++||||+++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNG 84 (285)
T ss_pred EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCC
Confidence 46799999999999995 5799999999864332 2334678899999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||++......
T Consensus 85 g~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05631 85 GDLKFHIYNMG---NPGFDEQRAIFYAAELCCGLEDLQ----RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET 157 (285)
T ss_pred CcHHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe
Confidence 99998886432 235899999999999999999999 889999999999999999999999999999765432
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||....... ..+-+.......
T Consensus 158 ~~~~~g~~~y~aPE~~~--~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~---------~~~~~~~~~~~~------ 220 (285)
T cd05631 158 VRGRVGTVGYMAPEVIN--NEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV---------KREEVDRRVKED------ 220 (285)
T ss_pred ecCCCCCCCccCHhhhc--CCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch---------hHHHHHHHhhcc------
Confidence 345788999999764 5678999999999999999999999997543211 011111111110
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPN-----MSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~ 636 (672)
..... ......+.+++.+||+.||.+||+ +.|+++
T Consensus 221 --~~~~~---~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 221 --QEEYS---EKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred --cccCC---ccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 00001 112235678888999999999997 677765
No 47
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=302.14 Aligned_cols=237 Identities=24% Similarity=0.348 Sum_probs=195.2
Q ss_pred cCHHHHHHHHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchH---HHHHHHHHHHcCCCCCceeeeEEEEEcCCe
Q 005880 355 FELEDLLRASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGK---REFEQHMEVLGRLRHPNLVGLKAYYFAREE 430 (672)
Q Consensus 355 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 430 (672)
+.++|. .+...||.|+||.|.+++.+ +|..+|+|++.+...-.. +...+|..+|+.+.||.++++++.+.+...
T Consensus 41 ~~l~df--e~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ 118 (355)
T KOG0616|consen 41 YSLQDF--ERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSN 118 (355)
T ss_pred cchhhh--hheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCe
Confidence 445544 45678999999999999954 689999999987654433 445779999999999999999999999999
Q ss_pred EEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 431 KLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 431 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
.++||||++||.|+.++++.. ++++....-+|.+|+.||+||| +.+|++|||||+|||+|.+|.+||.|||
T Consensus 119 lymvmeyv~GGElFS~Lrk~~-----rF~e~~arFYAAeivlAleylH----~~~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRKSG-----RFSEPHARFYAAEIVLALEYLH----SLDIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred EEEEEeccCCccHHHHHHhcC-----CCCchhHHHHHHHHHHHHHHHH----hcCeeeccCChHHeeeccCCcEEEEecc
Confidence 999999999999999998653 5999999999999999999999 8999999999999999999999999999
Q ss_pred CCccCCCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 511 LSIFAPPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 511 ~a~~~~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
+|+..... +.+||+.|+|||++. ...+..++|.|||||++|||+.|.+||..+.. .+..+.++.
T Consensus 190 FAK~v~~rT~TlCGTPeYLAPEii~--sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~------------~~iY~KI~~ 255 (355)
T KOG0616|consen 190 FAKRVSGRTWTLCGTPEYLAPEIIQ--SKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP------------IQIYEKILE 255 (355)
T ss_pred ceEEecCcEEEecCCccccChHHhh--cCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh------------HHHHHHHHh
Confidence 99988765 678999999999876 56889999999999999999999999986532 233334433
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCC
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQR 628 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~R 628 (672)
.+. .-+.... ..+.+|+...++.|-.+|
T Consensus 256 ~~v---------~fP~~fs---~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 256 GKV---------KFPSYFS---SDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred Ccc---------cCCcccC---HHHHHHHHHHHhhhhHhh
Confidence 321 1111112 235566668888888887
No 48
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=7.9e-38 Score=317.47 Aligned_cols=248 Identities=25% Similarity=0.405 Sum_probs=203.0
Q ss_pred HHHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 362 RASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+...+.||+|+||.||+|...++..+|+|.+.........++.+|+.+++.++|+||+++++++.+.+..++||||+++|
T Consensus 8 y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (261)
T cd05148 8 FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKG 87 (261)
T ss_pred HHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccC
Confidence 45668899999999999998889999999998766556778999999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++.... ...+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||.+......
T Consensus 88 ~L~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH----~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 88 SLLAFLRSPE---GQVLPVASLIDMACQVAEGMAYLE----EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred CHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 9999997643 245899999999999999999999 789999999999999999999999999999765433
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||.+. ...++.++||||||+++|+|++ |+.||.... ..+.+....... .
T Consensus 161 ~~~~~~~~~~~~PE~~~--~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~------------~~~~~~~~~~~~-~--- 222 (261)
T cd05148 161 SSDKKIPYKWTAPEAAS--HGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN------------NHEVYDQITAGY-R--- 222 (261)
T ss_pred ccCCCCceEecCHHHHc--cCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC------------HHHHHHHHHhCC-c---
Confidence 223356799999654 4578899999999999999998 899986432 111222221110 0
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
..........+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 223 -------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 223 -------MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 001112334678899999999999999999999999863
No 49
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.9e-38 Score=330.81 Aligned_cols=234 Identities=24% Similarity=0.331 Sum_probs=188.2
Q ss_pred cCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 368 LGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 368 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
||+|+||.||+|+.. +++.||+|+++... ......+.+|++++.+++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999965 58899999987432 22445678899999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 151 (312)
T cd05585 81 FHHLQRE-----GRFDLSRARFYTAELLCALENLH----KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTN 151 (312)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccc
Confidence 9999754 34899999999999999999999 889999999999999999999999999998754321
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||... +..+..........
T Consensus 152 ~~~gt~~y~aPE~~~--~~~~~~~~DvwslGvil~el~tg~~pf~~~------------~~~~~~~~~~~~~~------- 210 (312)
T cd05585 152 TFCGTPEYLAPELLL--GHGYTKAVDWWTLGVLLYEMLTGLPPFYDE------------NVNEMYRKILQEPL------- 210 (312)
T ss_pred cccCCcccCCHHHHc--CCCCCCccceechhHHHHHHHhCCCCcCCC------------CHHHHHHHHHcCCC-------
Confidence 345789999999764 567899999999999999999999999643 22233333322211
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.... .....+.+++.+||+.||++||++.++.+
T Consensus 211 --~~~~---~~~~~~~~li~~~L~~dp~~R~~~~~~~e 243 (312)
T cd05585 211 --RFPD---GFDRDAKDLLIGLLSRDPTRRLGYNGAQE 243 (312)
T ss_pred --CCCC---cCCHHHHHHHHHHcCCCHHHcCCCCCHHH
Confidence 0011 12235677888999999999986543333
No 50
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.2e-38 Score=318.82 Aligned_cols=245 Identities=25% Similarity=0.421 Sum_probs=197.9
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
..++||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+||+++++++.+.+..++||||+++|+|
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 88 (261)
T cd05072 10 LVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSL 88 (261)
T ss_pred EeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcH
Confidence 4578999999999999988888999999875433 457889999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.++++... ...+++..++.++.|+++||+||| +.+++||||||+||+++.++.++|+|||+++.....
T Consensus 89 ~~~l~~~~---~~~~~~~~~~~~~~~l~~~l~~LH----~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (261)
T cd05072 89 LDFLKSDE---GGKVLLPKLIDFSAQIAEGMAYIE----RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR 161 (261)
T ss_pred HHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccchhhEEecCCCcEEECCCccceecCCCceecc
Confidence 99997543 235889999999999999999999 789999999999999999999999999999766432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||.+. +..++.++|||||||++|||+| |+.||..... ....... ......
T Consensus 162 ~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~------------~~~~~~~-~~~~~~--- 223 (261)
T cd05072 162 EGAKFPIKWTAPEAIN--FGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN------------SDVMSAL-QRGYRM--- 223 (261)
T ss_pred CCCccceecCCHHHhc--cCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH------------HHHHHHH-HcCCCC---
Confidence 122345799999654 4578889999999999999998 9999864321 1111111 111100
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
+.......++.+++.+|++.+|++||+++++.+.|+++
T Consensus 224 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 224 -------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred -------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 00111234578889999999999999999999999863
No 51
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-38 Score=325.02 Aligned_cols=258 Identities=25% Similarity=0.388 Sum_probs=213.7
Q ss_pred ccccCHHHHHHHHhcccCcCCeEEEEEEEEcC---C--cEEEEEEccc-CCcchHHHHHHHHHHHcCCCCCceeeeEEEE
Q 005880 352 TKRFELEDLLRASAEMLGKGGFGTAYKAVLDD---G--SVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVGLKAYY 425 (672)
Q Consensus 352 ~~~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~---g--~~vavK~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 425 (672)
.+.|++..-.....++||+|-||.||+|.+.+ | -.||||..+. ....+.+.|.+|..+|++++||||++++|+|
T Consensus 381 ~rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~ 460 (974)
T KOG4257|consen 381 VRNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVC 460 (974)
T ss_pred CCcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeee
Confidence 45677666666778899999999999999643 3 3689999986 4455688999999999999999999999999
Q ss_pred EcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEE
Q 005880 426 FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNAR 505 (672)
Q Consensus 426 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~k 505 (672)
. +...|+|||.++.|.|..+|+.++ ..++..+...++.|+..||+||| +.++|||||..+|||+....-+|
T Consensus 461 ~-e~P~WivmEL~~~GELr~yLq~nk----~sL~l~tL~ly~~Qi~talaYLe----SkrfVHRDIAaRNiLVsSp~CVK 531 (974)
T KOG4257|consen 461 V-EQPMWIVMELAPLGELREYLQQNK----DSLPLRTLTLYCYQICTALAYLE----SKRFVHRDIAARNILVSSPQCVK 531 (974)
T ss_pred e-ccceeEEEecccchhHHHHHHhcc----ccchHHHHHHHHHHHHHHHHHHH----hhchhhhhhhhhheeecCcceee
Confidence 7 467899999999999999998765 45889999999999999999999 89999999999999999999999
Q ss_pred EeccCCCccCCCCCCCC------CCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCC
Q 005880 506 VSDFGLSIFAPPSTVPR------SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVD 578 (672)
Q Consensus 506 l~DfG~a~~~~~~~~~~------t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~ 578 (672)
|+|||+++......+.. ..-||||| ..+.+.++.++|||-|||.+||++. |..||.+-...+-+
T Consensus 532 LaDFGLSR~~ed~~yYkaS~~kLPIKWmaPE--SINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI------- 602 (974)
T KOG4257|consen 532 LADFGLSRYLEDDAYYKASRGKLPIKWMAPE--SINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI------- 602 (974)
T ss_pred ecccchhhhccccchhhccccccceeecCcc--ccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE-------
Confidence 99999999988764332 23499999 5567899999999999999999987 99999764332210
Q ss_pred hhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 579 LPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
..+- ...+.+..+.++..+..++.+||+.||.+||++.|+...|.++.+
T Consensus 603 --------------~~iE--nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 603 --------------GHIE--NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred --------------EEec--CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 1110 111233445677789999999999999999999999999988866
No 52
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6e-38 Score=332.81 Aligned_cols=240 Identities=23% Similarity=0.376 Sum_probs=188.3
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
..+.||+|+||.||+|+.. +|+.||||++..... .....+.+|+++++.++|+||+++++++...+..++||||+++|
T Consensus 78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 157 (353)
T PLN00034 78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGG 157 (353)
T ss_pred hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCC
Confidence 4578999999999999955 689999999865432 23567899999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.... ...+..+..++.|+++||+||| +.+|+||||||+|||+++++.+||+|||+++.....
T Consensus 158 ~L~~~~---------~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~ 224 (353)
T PLN00034 158 SLEGTH---------IADEQFLADVARQILSGIAYLH----RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP 224 (353)
T ss_pred cccccc---------cCCHHHHHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence 986432 2567788899999999999999 789999999999999999999999999999765432
Q ss_pred --CCCCCCcccCCCcccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 519 --TVPRSNGYRAPELSSS---DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~---~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
...++..|+|||++.. .+...+.++|||||||++|||++|+.||...... +............
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~---------~~~~~~~~~~~~~--- 292 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG---------DWASLMCAICMSQ--- 292 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc---------cHHHHHHHHhccC---
Confidence 3467889999997643 2334567999999999999999999999732211 1111111111100
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. ........++.+++.+||+.||++|||+.|+++
T Consensus 293 -----~~---~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 293 -----PP---EAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred -----CC---CCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 000122345788889999999999999999986
No 53
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=326.35 Aligned_cols=238 Identities=26% Similarity=0.386 Sum_probs=195.7
Q ss_pred hcccCcCCeEEEEEEE-EcCCcEEEEEEcccC-CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.++||+|.||.||+|. ...++.||+|++.-. .....+++++|+.++..++++||.+++|.+..+...+++||||.+|+
T Consensus 18 ~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGs 97 (467)
T KOG0201|consen 18 LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGS 97 (467)
T ss_pred chhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcc
Confidence 3779999999999999 457899999999743 33356789999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC-----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP----- 517 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~----- 517 (672)
+.+.++... .+++..+.-|++++..||.||| ..+.+|||||+.||++..+|.+|++|||.+.....
T Consensus 98 v~~lL~~~~-----~~~E~~i~~ilre~l~~l~ylH----~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr 168 (467)
T KOG0201|consen 98 VLDLLKSGN-----ILDEFEIAVILREVLKGLDYLH----SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR 168 (467)
T ss_pred hhhhhccCC-----CCccceeeeehHHHHHHhhhhh----hcceecccccccceeEeccCcEEEEecceeeeeechhhcc
Confidence 999997543 3477888889999999999999 78999999999999999999999999999865543
Q ss_pred CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 518 STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 518 ~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
.+..||+.|||||++. ...|+.|+||||||++.+||.+|.+|+....+. ..+..+..
T Consensus 169 ~tfvGTPfwMAPEVI~--~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm---------------------rvlflIpk 225 (467)
T KOG0201|consen 169 KTFVGTPFWMAPEVIK--QSGYDTKADIWSLGITAIELAKGEPPHSKLHPM---------------------RVLFLIPK 225 (467)
T ss_pred ccccccccccchhhhc--cccccchhhhhhhhHHHHHHhcCCCCCcccCcc---------------------eEEEeccC
Confidence 4788999999999886 568999999999999999999999998643211 00111100
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....... ......+.+++..||++||+.||+|.++++
T Consensus 226 ~~PP~L~--~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 226 SAPPRLD--GDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred CCCCccc--cccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 0000001 133445778888999999999999998875
No 54
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=9.8e-38 Score=316.88 Aligned_cols=245 Identities=28% Similarity=0.450 Sum_probs=198.4
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
+.+.||+|++|.||+|...+++.||+|.++.... ..+++.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 88 (261)
T cd05068 10 LLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSL 88 (261)
T ss_pred eEEEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcH
Confidence 4578999999999999988788999999875443 467799999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCC---C
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST---V 520 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~---~ 520 (672)
.+++.... ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||+++...... .
T Consensus 89 ~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (261)
T cd05068 89 LEYLQGGA---GRALKLPQLIDMAAQVASGMAYLE----AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAR 161 (261)
T ss_pred HHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccccc
Confidence 99997543 245899999999999999999999 7899999999999999999999999999997665331 1
Q ss_pred CC---CCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 521 PR---SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 521 ~~---t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
.+ +..|+|||++. +..++.++||||||+++|||+| |+.||.... ........ .....
T Consensus 162 ~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------------~~~~~~~~-~~~~~---- 222 (261)
T cd05068 162 EGAKFPIKWTAPEAAL--YNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT------------NAEVLQQV-DQGYR---- 222 (261)
T ss_pred CCCcCceeccCccccc--cCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC------------HHHHHHHH-HcCCC----
Confidence 12 24699999654 5678999999999999999999 999986432 11111111 11110
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
..........+.+++.+|++.+|.+||++.++++.|+++
T Consensus 223 ------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 223 ------MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ------CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 001112334688899999999999999999999999863
No 55
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.8e-38 Score=327.71 Aligned_cols=237 Identities=21% Similarity=0.289 Sum_probs=192.2
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
+.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 84 (291)
T cd05612 5 RIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVP 84 (291)
T ss_pred eeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCC
Confidence 3478999999999999965 68999999986432 2234568899999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 85 ~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 85 GGELFSYLRNS-----GRFSNSTGLFYASEIVCALEYLH----SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence 99999999754 34889999999999999999999 889999999999999999999999999999866543
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||.... .............
T Consensus 156 ~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~------------~~~~~~~i~~~~~------ 215 (291)
T cd05612 156 WTLCGTPEYLAPEVIQ--SKGHNKAVDWWALGILIYEMLVGYPPFFDDN------------PFGIYEKILAGKL------ 215 (291)
T ss_pred ccccCChhhcCHHHHc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHhCCc------
Confidence 345788999999764 4567899999999999999999999996432 2222222222210
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCC-----HHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPN-----MSHVV 635 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl 635 (672)
..... ....+.+++.+||+.||.+||+ +.|++
T Consensus 216 ---~~~~~---~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l 252 (291)
T cd05612 216 ---EFPRH---LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVK 252 (291)
T ss_pred ---CCCcc---CCHHHHHHHHHHcCCCHHHccCCccCCHHHHh
Confidence 00011 1235678888999999999995 77665
No 56
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.2e-37 Score=316.61 Aligned_cols=245 Identities=28% Similarity=0.417 Sum_probs=197.8
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
..+.||+|+||.||+|... .++.||+|.++.... ...++.+|++++++++|+||+++++++..++..++||||+++++
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (263)
T cd05052 10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 88 (263)
T ss_pred EeeecCCcccceEEEEEEecCCceEEEEEecCCch-HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCc
Confidence 3467999999999999955 588999999875432 45678999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCC---
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--- 519 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~--- 519 (672)
|.+++.... ...+++..++.++.|+++||+||| +.+++||||||+||++++++.+||+|||++.......
T Consensus 89 L~~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~ 161 (263)
T cd05052 89 LLDYLRECN---RQEVNAVVLLYMATQISSAMEYLE----KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 161 (263)
T ss_pred HHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHH----hCCEeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence 999997543 245899999999999999999999 7899999999999999999999999999997665431
Q ss_pred ---CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 520 ---VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 520 ---~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...+..|+|||.+. +..++.++|||||||++|||++ |..||... +..+........ ...
T Consensus 162 ~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~el~t~g~~p~~~~------------~~~~~~~~~~~~-~~~-- 224 (263)
T cd05052 162 HAGAKFPIKWTAPESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------------DLSQVYELLEKG-YRM-- 224 (263)
T ss_pred cCCCCCccccCCHHHhc--cCCCCchhHHHHHHHHHHHHHcCCCCCCCCC------------CHHHHHHHHHCC-CCC--
Confidence 12245799999654 5678899999999999999998 89998532 222222222111 000
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
. .. ......+.+++.+||+.+|++||++.+++++|+.+
T Consensus 225 ---~--~~---~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 ---E--RP---EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---C--CC---CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0 01 11234678888999999999999999999999875
No 57
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=9.4e-38 Score=334.58 Aligned_cols=262 Identities=24% Similarity=0.348 Sum_probs=201.5
Q ss_pred ccCHHHHHHHHhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCC-CCceeeeEEEE
Q 005880 354 RFELEDLLRASAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLR-HPNLVGLKAYY 425 (672)
Q Consensus 354 ~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~ 425 (672)
++++.+-.+.+.+.||+|+||.||+|+.. .+..||||+++.... ...+.+.+|+++++++. ||||+++++++
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 34444434456688999999999999853 134799999975432 34567899999999996 99999999999
Q ss_pred EcCCeEEEEEeecCCCChhHHhhcCCC-----------------------------------------------------
Q 005880 426 FAREEKLLVSEYMPNGSLFWLLHGNRG----------------------------------------------------- 452 (672)
Q Consensus 426 ~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------------- 452 (672)
.+.+..++||||+++|+|.++++....
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 999999999999999999999865321
Q ss_pred --------------------------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCC
Q 005880 453 --------------------------------------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKST 494 (672)
Q Consensus 453 --------------------------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~ 494 (672)
.....+++..+..++.|+++||+||| +.+|+||||||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivH~dikp~ 266 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA----SKNCVHRDLAAR 266 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChH
Confidence 01134788999999999999999999 789999999999
Q ss_pred CEEeCCCCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 005880 495 NVLLDKTGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDG 566 (672)
Q Consensus 495 NIll~~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~ 566 (672)
||++++++.+||+|||+++..... ...++..|+|||++. +..++.++|||||||++|||++ |..||....
T Consensus 267 Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~ 344 (400)
T cd05105 267 NVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIF--DNLYTTLSDVWSYGILLWEIFSLGGTPYPGMI 344 (400)
T ss_pred hEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhc--CCCCCchhhHHHHHHHHHHHHHCCCCCCcccc
Confidence 999999999999999998765332 223456799999764 4578999999999999999997 999986431
Q ss_pred CCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 567 GGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.. ............ ..........+.+++.+||+.||++|||+.+|.++|+++.+
T Consensus 345 ~~------------~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 345 VD------------STFYNKIKSGYR----------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred hh------------HHHHHHHhcCCC----------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 11 111111111110 00111233467889999999999999999999999998753
No 58
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.7e-38 Score=329.35 Aligned_cols=236 Identities=25% Similarity=0.341 Sum_probs=189.8
Q ss_pred cccCcCCeEEEEEEEE-cCCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.||+|+||.||+++. .+|..||+|+++... ......+.+|++++++++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3689999999999995 468999999987532 223456778999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|..++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 151 (323)
T cd05595 81 ELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 151 (323)
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc
Confidence 999988654 24899999999999999999999 889999999999999999999999999998753221
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||.... ..........+..
T Consensus 152 ~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~------------~~~~~~~~~~~~~----- 212 (323)
T cd05595 152 MKTFCGTPEYLAPEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------------HERLFELILMEEI----- 212 (323)
T ss_pred cccccCCcCcCCccccc--CCCCCchhchhhhHHHHHHHHhCCCCCCCCC------------HHHHHHHHhcCCC-----
Confidence 345788999999764 4578999999999999999999999996432 1111222211110
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 636 (672)
..... ....+.+++.+||+.||.+|| ++.++++
T Consensus 213 ----~~p~~---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 213 ----RFPRT---LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred ----CCCCC---CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 00111 223567888899999999998 7888765
No 59
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-39 Score=318.17 Aligned_cols=259 Identities=26% Similarity=0.370 Sum_probs=191.6
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCe---E--EEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREE---K--LLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---~--~lv~e~~ 438 (672)
.+++|.|+||.||+|... +++.||||+.-... +.-.+|+++|++++|||||+++-+|....+ . .+|||||
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 378999999999999954 57999999875432 233578999999999999999988875332 2 3899999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC-CcEEEeccCCCccCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT-GNARVSDFGLSIFAPP 517 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~-~~~kl~DfG~a~~~~~ 517 (672)
+. +|.+.++.... .+..++...+.-+.+|+.+||+||| +.+|+||||||.|+|+|.+ |.+||||||.|+.+..
T Consensus 105 P~-tL~~~~r~~~~-~~~~mp~~~iKLYt~Qlfrgl~yLh----~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~ 178 (364)
T KOG0658|consen 105 PE-TLYRVIRHYTR-ANQRMPLLEIKLYTYQLFRGLAYLH----SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK 178 (364)
T ss_pred hH-HHHHHHHHHhh-cCCCCceeeeHHHHHHHHHHHHHHH----hcCcccCCCChheEEEcCCCCeEEeccCCcceeecc
Confidence 77 99999985321 2345778888999999999999999 7899999999999999976 9999999999998876
Q ss_pred CC----CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH---hhh
Q 005880 518 ST----VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV---REE 590 (672)
Q Consensus 518 ~~----~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 590 (672)
+. +..|..|+|||++.. ...|+.+.||||.|||+.||+-|++-|.++...++ +...++-.- +++
T Consensus 179 ~epniSYicSRyYRaPELifg-a~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ--------L~eIik~lG~Pt~e~ 249 (364)
T KOG0658|consen 179 GEPNISYICSRYYRAPELIFG-ATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ--------LVEIIKVLGTPTRED 249 (364)
T ss_pred CCCceeEEEeccccCHHHHcC-ccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH--------HHHHHHHhCCCCHHH
Confidence 53 345778999998875 46899999999999999999999999987543221 111111100 000
Q ss_pred ------ccccccchhhcccc----ChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHHHHh
Q 005880 591 ------WTAEVFDLELMRYK----DIEEEMVGLLQVAMACTSASPDQRPNMSHVVK--LIEELR 642 (672)
Q Consensus 591 ------~~~~~~d~~~~~~~----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~--~L~~i~ 642 (672)
...+.-.+...... .......+.++++.+++..+|.+|.++.|++. ..++++
T Consensus 250 I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 250 IKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred HhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence 00011111111111 11123356788888999999999999999984 345554
No 60
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.2e-37 Score=327.60 Aligned_cols=191 Identities=26% Similarity=0.387 Sum_probs=166.4
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
..+.||+|+||.||+++.. +|..||+|.+.... ......+.+|++++++++||||+++++++..++..++||||+++|
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 88 (331)
T cd06649 9 RISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 88 (331)
T ss_pred EEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCC
Confidence 3478999999999999965 68899999987542 224567999999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++.... .+++..+..++.|++.||+|||+ ..+|+||||||+||+++.++.+||+|||++......
T Consensus 89 ~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 160 (331)
T cd06649 89 SLDQVLKEAK-----RIPEEILGKVSIAVLRGLAYLRE---KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 160 (331)
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHhh---cCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccc
Confidence 9999997543 48899999999999999999992 246999999999999999999999999998765432
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
...++..|+|||++. +..++.++|||||||++|||+||+.||..
T Consensus 161 ~~~g~~~y~aPE~~~--~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 161 SFVGTRSYMSPERLQ--GTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred cCCCCcCcCCHhHhc--CCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 445788999999764 55789999999999999999999999964
No 61
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-39 Score=329.26 Aligned_cols=257 Identities=27% Similarity=0.406 Sum_probs=213.9
Q ss_pred cccCHHHHHHHHhcccCcCCeEEEEEEEEcC-CcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeE
Q 005880 353 KRFELEDLLRASAEMLGKGGFGTAYKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEK 431 (672)
Q Consensus 353 ~~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 431 (672)
..++.+.-.....++||-|.||.||.|+|+. .-.||||.++...+ ..++|..|..+|+.++|||+|+++|+|..+...
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 3455554444567899999999999999874 56799999987665 678999999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCC
Q 005880 432 LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL 511 (672)
Q Consensus 432 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~ 511 (672)
|||+|||.+|+|.++|+... +..++....+.++.||+.|++||. ..++|||||.++|+||.++..+|++|||+
T Consensus 339 YIiTEfM~yGNLLdYLRecn---r~ev~avvLlyMAtQIsSaMeYLE----kknFIHRDLAARNCLVgEnhiVKvADFGL 411 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECN---RSEVPAVVLLYMATQISSAMEYLE----KKNFIHRDLAARNCLVGENHIVKVADFGL 411 (1157)
T ss_pred EEEEecccCccHHHHHHHhc---hhhcchhHHHHHHHHHHHHHHHHH----HhhhhhhhhhhhhccccccceEEeeccch
Confidence 99999999999999998765 355777888999999999999999 88999999999999999999999999999
Q ss_pred CccCCCCCCCCC------CcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHH
Q 005880 512 SIFAPPSTVPRS------NGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQ 584 (672)
Q Consensus 512 a~~~~~~~~~~t------~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 584 (672)
++.+..+++..- .-|.|||-+. -..++.|+|||+|||+|||+.| |-.||- ++++.+.+.
T Consensus 412 sRlMtgDTYTAHAGAKFPIKWTAPEsLA--yNtFSiKSDVWAFGVLLWEIATYGMsPYP------------GidlSqVY~ 477 (1157)
T KOG4278|consen 412 SRLMTGDTYTAHAGAKFPIKWTAPESLA--YNTFSIKSDVWAFGVLLWEIATYGMSPYP------------GIDLSQVYG 477 (1157)
T ss_pred hhhhcCCceecccCccCcccccCccccc--ccccccchhhHHHHHHHHHHHhcCCCCCC------------CccHHHHHH
Confidence 999987754432 3499999654 4688999999999999999998 677774 455555443
Q ss_pred HHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 585 SVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
-+.+.- +....+.+...+.+|++.||++.|.+||++.|+-+.++.+.
T Consensus 478 LLEkgy-----------RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 478 LLEKGY-----------RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred HHhccc-----------cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 322221 11223456678999999999999999999999999998764
No 62
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=310.04 Aligned_cols=270 Identities=21% Similarity=0.312 Sum_probs=200.9
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEccc--CCcchHHHHHHHHHHHcCCCCCceeeeEEEEEc-----CCeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKD--ASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA-----REEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~~~lv~e 436 (672)
.+.||+|+||.|+.+.. .+|+.||||++.+ ......++-.+|+++|+.++|+||+.+++.+.. -+..|+|+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e 106 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE 106 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence 36799999999999995 4789999999974 233356788899999999999999999999865 346899999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
+| +.+|...++.+. .++.....-+.+|+++||.|+| +.+|+||||||+|++++.+...||+|||+|+...
T Consensus 107 lM-etDL~~iik~~~-----~L~d~H~q~f~YQiLrgLKyiH----SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 107 LM-ETDLHQIIKSQQ-----DLTDDHAQYFLYQILRGLKYIH----SANVIHRDLKPSNLLLNADCDLKICDFGLARYLD 176 (359)
T ss_pred HH-hhHHHHHHHcCc-----cccHHHHHHHHHHHHHhcchhh----cccccccccchhheeeccCCCEEeccccceeecc
Confidence 99 669999998653 4899999999999999999999 8999999999999999999999999999999885
Q ss_pred C-------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCC---CCCCChhHHHHHH
Q 005880 517 P-------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGC---GGAVDLPRWVQSV 586 (672)
Q Consensus 517 ~-------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~---~~~~~~~~~~~~~ 586 (672)
. ..++.|..|+|||++. ....|+.+.||||.|||+.||++|++-|.+...-+++.. ..+..-.+-+..+
T Consensus 177 ~~~~~~~mTeYVaTRWYRAPElll-~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i 255 (359)
T KOG0660|consen 177 KFFEDGFMTEYVATRWYRAPELLL-NSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKI 255 (359)
T ss_pred ccCcccchhcceeeeeecCHHHHh-ccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHh
Confidence 3 2556789999999874 568999999999999999999999999976543221100 0000000111111
Q ss_pred Hhhh---ccccccchh----hccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHHHHhcCCCCC
Q 005880 587 VREE---WTAEVFDLE----LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK--LIEELRGVEVSP 648 (672)
Q Consensus 587 ~~~~---~~~~~~d~~----~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~--~L~~i~~~~~~~ 648 (672)
..+. .+....... ...++... ...++|+.+||..||.+|+|++|+++ .|......+.-|
T Consensus 256 ~s~~ar~yi~slp~~p~~~f~~~fp~a~---p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 256 RSEKARPYIKSLPQIPKQPFSSIFPNAN---PLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred ccHHHHHHHHhCCCCCCCCHHHHcCCCC---HHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 1000 000000000 00111222 34567777999999999999999986 355555544444
No 63
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.7e-37 Score=319.94 Aligned_cols=252 Identities=26% Similarity=0.387 Sum_probs=201.2
Q ss_pred HhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
+.+.||+|+||.||++... ++..+|+|.+..........+.+|++++.+++||||+++++++...+..++||||
T Consensus 9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (288)
T cd05093 9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 88 (288)
T ss_pred eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEc
Confidence 4578999999999999842 3467999999876655667899999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCC--------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEecc
Q 005880 438 MPNGSLFWLLHGNRG--------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDF 509 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~--------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 509 (672)
+++++|.+++..... .....+++.+++.++.|++.||+||| +.+++||||||+||++++++.+||+||
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH----~~~i~H~dlkp~Nili~~~~~~kl~df 164 (288)
T cd05093 89 MKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA----SQHFVHRDLATRNCLVGENLLVKIGDF 164 (288)
T ss_pred CCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccCcceEEEccCCcEEeccC
Confidence 999999999975431 12235899999999999999999999 789999999999999999999999999
Q ss_pred CCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhH
Q 005880 510 GLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPR 581 (672)
Q Consensus 510 G~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~ 581 (672)
|+++..... ...++..|+|||++. +..++.++|||||||++|||++ |+.||.... ..+
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~------------~~~ 230 (288)
T cd05093 165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIM--YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS------------NNE 230 (288)
T ss_pred CccccccCCceeecCCCCCccccccCHHHhc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------------HHH
Confidence 999755332 222356799999664 4678899999999999999998 899985432 112
Q ss_pred HHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 582 WVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 582 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
......... ... .. .....++.+++.+||+.||.+|||+.||.+.|+.+.+.
T Consensus 231 ~~~~i~~~~-~~~-------~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 231 VIECITQGR-VLQ-------RP---RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHHHHHcCC-cCC-------CC---CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 222221111 000 00 11223578899999999999999999999999998754
No 64
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5.5e-38 Score=329.42 Aligned_cols=237 Identities=23% Similarity=0.349 Sum_probs=191.0
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.||+|+||.||+++.. +|+.||||++.... ......+.+|+++++.++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999954 68999999997532 224467888999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++... ..+++.++..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~ 151 (328)
T cd05593 81 ELFFHLSRE-----RVFSEDRTRFYGAEIVSALDYLH----SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT 151 (328)
T ss_pred CHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccc
Confidence 999988654 34899999999999999999999 889999999999999999999999999998753221
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||.... ..+..........
T Consensus 152 ~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslGvil~elltG~~Pf~~~~------------~~~~~~~~~~~~~----- 212 (328)
T cd05593 152 MKTFCGTPEYLAPEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------------HEKLFELILMEDI----- 212 (328)
T ss_pred cccccCCcCccChhhhc--CCCCCccCCccccchHHHHHhhCCCCCCCCC------------HHHHHHHhccCCc-----
Confidence 345789999999764 4578899999999999999999999996432 1122222211110
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVKL 637 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 637 (672)
. .... ....+.+++.+||+.||++|| ++.|+++.
T Consensus 213 --~--~p~~---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 213 --K--FPRT---LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred --c--CCCC---CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 0 0111 123467788899999999997 88988753
No 65
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.9e-38 Score=331.80 Aligned_cols=239 Identities=23% Similarity=0.315 Sum_probs=192.7
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.+.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 21 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 100 (329)
T PTZ00263 21 EMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFV 100 (329)
T ss_pred EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCC
Confidence 34578999999999999965 68999999987532 223457889999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 101 ~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 101 VGGELFTHLRKA-----GRFPNDVAKFYHAELVLAFEYLH----SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred CCChHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 999999999754 24788999999999999999999 889999999999999999999999999999876543
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||.... ..+....+....
T Consensus 172 ~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~elltg~~pf~~~~------------~~~~~~~i~~~~------ 231 (329)
T PTZ00263 172 TFTLCGTPEYLAPEVIQ--SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT------------PFRIYEKILAGR------ 231 (329)
T ss_pred cceecCChhhcCHHHHc--CCCCCCcceeechHHHHHHHHcCCCCCCCCC------------HHHHHHHHhcCC------
Confidence 456788999999764 4567899999999999999999999996432 112222222111
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPN-----MSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~ 636 (672)
...... ....+.+++.+||+.||.+||+ +.++++
T Consensus 232 ---~~~p~~---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 232 ---LKFPNW---FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ---cCCCCC---CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 000011 1234678888999999999997 566663
No 66
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.6e-37 Score=317.11 Aligned_cols=248 Identities=25% Similarity=0.373 Sum_probs=198.4
Q ss_pred HHhcccCcCCeEEEEEEEEcC------CcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEE
Q 005880 363 ASAEMLGKGGFGTAYKAVLDD------GSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 435 (672)
.+.+.||+|+||.||+|...+ +..||||.++..... ..+.+.+|++++++++|+||+++++++......++||
T Consensus 8 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 87 (280)
T cd05049 8 VLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVF 87 (280)
T ss_pred hHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEE
Confidence 456789999999999998643 478999999865443 4578999999999999999999999999999999999
Q ss_pred eecCCCChhHHhhcCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEE
Q 005880 436 EYMPNGSLFWLLHGNRG---------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARV 506 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl 506 (672)
||+++|+|.+++..... .....+++.++..++.|++.||+||| +.+++||||||+||+++.++.+||
T Consensus 88 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH----~~~i~h~dlkp~nili~~~~~~kl 163 (280)
T cd05049 88 EYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA----SQHFVHRDLATRNCLVGYDLVVKI 163 (280)
T ss_pred ecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh----hCCeeccccccceEEEcCCCeEEE
Confidence 99999999999976431 22345889999999999999999999 889999999999999999999999
Q ss_pred eccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCC
Q 005880 507 SDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVD 578 (672)
Q Consensus 507 ~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~ 578 (672)
+|||+++..... ....+..|+|||++. +..++.++|||||||++|||++ |+.||....
T Consensus 164 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~------------ 229 (280)
T cd05049 164 GDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIM--YRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS------------ 229 (280)
T ss_pred CCcccceecccCcceecCCCCcccceecChhhhc--cCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC------------
Confidence 999998754322 222356799999764 5678999999999999999998 999986432
Q ss_pred hhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 579 LPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
..+.+.... ....... .......+.+++.+||+.||++||++.||++.|+
T Consensus 230 ~~~~~~~~~-~~~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 230 NEEVIECIT-QGRLLQR----------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHHHH-cCCcCCC----------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 112222221 1111000 0122346788899999999999999999999886
No 67
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.6e-38 Score=324.15 Aligned_cols=250 Identities=19% Similarity=0.237 Sum_probs=190.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|+.. +++.||+|+++.... .....+.+|++++++++||||+++++++..++..++||||++ |+
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~ 88 (288)
T cd07871 10 LDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SD 88 (288)
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-cC
Confidence 478999999999999955 689999999874332 234577899999999999999999999999999999999997 59
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 89 l~~~l~~~~----~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~ 160 (288)
T cd07871 89 LKQYLDNCG----NLMSMHNVKIFMFQLLRGLSYCH----KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY 160 (288)
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc
Confidence 999886442 34789999999999999999999 889999999999999999999999999998754322
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh--------
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE-------- 589 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 589 (672)
...++..|+|||++.. ...++.++||||+||++|||+||+.||...... +.+....+.
T Consensus 161 ~~~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~------------~~~~~~~~~~~~~~~~~ 227 (288)
T cd07871 161 SNEVVTLWYRPPDVLLG-STEYSTPIDMWGVGCILYEMATGRPMFPGSTVK------------EELHLIFRLLGTPTEET 227 (288)
T ss_pred cCceecccccChHHhcC-CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------------HHHHHHHHHhCCCChHH
Confidence 3456788999997642 356789999999999999999999999654221 111111100
Q ss_pred -------hccccccchhhccccC---hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 590 -------EWTAEVFDLELMRYKD---IEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 590 -------~~~~~~~d~~~~~~~~---~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
........+.....+. ......+..+++.+||..||.+|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 228 WPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000000000000 0011234678888999999999999999974
No 68
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-38 Score=311.04 Aligned_cols=241 Identities=23% Similarity=0.392 Sum_probs=201.9
Q ss_pred HHHhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHH---HHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 362 RASAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKR---EFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~---~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
+.+.+.||+|.||.|-+|+. ..|+.||||.+++..+.+++ .+++||+||+.|+||||+.++.+|...+...|||||
T Consensus 55 yE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEY 134 (668)
T KOG0611|consen 55 YEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEY 134 (668)
T ss_pred HHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEe
Confidence 44567899999999999994 67999999999887665554 468999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
..+|.|++++... ..+++.+...++.||..|+.|.| .++++|||||.+|||+|.++++||+|||++-.+..
T Consensus 135 aS~GeLYDYiSer-----~~LsErEaRhfFRQIvSAVhYCH----knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 135 ASGGELYDYISER-----GSLSEREARHFFRQIVSAVHYCH----KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred cCCccHHHHHHHh-----ccccHHHHHHHHHHHHHHHHHHh----hccceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 9999999999854 45999999999999999999999 89999999999999999999999999999987766
Q ss_pred C----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 518 S----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 518 ~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
. +.+|++-|.+||+..+ ...-++.+|-||+||+||.|+.|..||++. +....++++.+...
T Consensus 206 ~kfLqTFCGSPLYASPEIvNG-~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~------------Dhk~lvrQIs~GaY-- 270 (668)
T KOG0611|consen 206 KKFLQTFCGSPLYASPEIVNG-TPYKGPEVDSWSLGVLLYTLVYGTMPFDGR------------DHKRLVRQISRGAY-- 270 (668)
T ss_pred ccHHHHhcCCcccCCccccCC-CCCCCCccchhhHHHHHHHHhhcccccCCc------------hHHHHHHHhhcccc--
Confidence 5 6788999999998753 344478999999999999999999999743 44444444444322
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
..+. ......-||++||..+|++|-|+.+|...
T Consensus 271 --rEP~---------~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 271 --REPE---------TPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred --cCCC---------CCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 1111 11123456779999999999999998754
No 69
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4e-37 Score=310.62 Aligned_cols=241 Identities=25% Similarity=0.387 Sum_probs=192.0
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46999999999999964 78999999886533 23456799999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCCC---
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--- 520 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--- 520 (672)
.+++.... ..+++.+++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 152 (252)
T cd05084 81 LTFLRTEG----PRLKVKELIQMVENAAAGMEYLE----SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAST 152 (252)
T ss_pred HHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH----hCCccccccchheEEEcCCCcEEECccccCccccccccccc
Confidence 99997432 35899999999999999999999 88999999999999999999999999999875543211
Q ss_pred ----CCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 521 ----PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 521 ----~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
..+..|+|||.+. +..++.++|||||||++|||++ |..||..... .. ...........
T Consensus 153 ~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~------------~~-~~~~~~~~~~~-- 215 (252)
T cd05084 153 GGMKQIPVKWTAPEALN--YGRYSSESDVWSFGILLWEAFSLGAVPYANLSN------------QQ-TREAIEQGVRL-- 215 (252)
T ss_pred CCCCCCceeecCchhhc--CCCCChHHHHHHHHHHHHHHHhCCCCCccccCH------------HH-HHHHHHcCCCC--
Confidence 1134699999664 4568899999999999999998 8888853211 01 11111111000
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
.........+.+++.+|++.+|++|||+.||+++|+
T Consensus 216 --------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 216 --------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred --------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 011122346788999999999999999999999886
No 70
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=300.01 Aligned_cols=244 Identities=23% Similarity=0.338 Sum_probs=195.7
Q ss_pred HHHhcccCcCCeEEEEEEE-EcCCcEEEEEEcc--cCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 362 RASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
+.+.+.||+|.|+.||++. ..+|+.+|+|++. +.+..+.+++.+|++|.+.|+|||||++.+.+......|+|+|+|
T Consensus 13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m 92 (355)
T KOG0033|consen 13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 92 (355)
T ss_pred hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecc
Confidence 3456789999999999998 4579999999875 333347789999999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC---CcEEEeccCCCccC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT---GNARVSDFGLSIFA 515 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~---~~~kl~DfG~a~~~ 515 (672)
+|++|..-+-.. ...++...-..++||+++|.|.| .++|||||+||+|+++-.. --+||+|||+|...
T Consensus 93 ~G~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH----~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 93 TGGELFEDIVAR-----EFYSEADASHCIQQILEALAYCH----SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred cchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH----hcCceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 999995544322 24778888899999999999999 8999999999999999543 34899999999888
Q ss_pred CCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 516 PPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 516 ~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
... ...||++|||||++. ...|+..+|||+.|||||-|+.|.+||.++. -...++.+.
T Consensus 164 ~~g~~~~G~~GtP~fmaPEvvr--kdpy~kpvDiW~cGViLfiLL~G~~PF~~~~------------~~rlye~I~---- 225 (355)
T KOG0033|consen 164 NDGEAWHGFAGTPGYLSPEVLK--KDPYSKPVDIWACGVILYILLVGYPPFWDED------------QHRLYEQIK---- 225 (355)
T ss_pred CCccccccccCCCcccCHHHhh--cCCCCCcchhhhhhHHHHHHHhCCCCCCCcc------------HHHHHHHHh----
Confidence 754 567899999999875 4589999999999999999999999998642 122222222
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
...+|-....++.+.++. .+|+++||..||.+|.|+.|.++
T Consensus 226 -~g~yd~~~~~w~~is~~A---k~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 226 -AGAYDYPSPEWDTVTPEA---KSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred -ccccCCCCcccCcCCHHH---HHHHHHHhccChhhhccHHHHhC
Confidence 223333333344445554 45666999999999999998763
No 71
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3e-37 Score=312.44 Aligned_cols=242 Identities=27% Similarity=0.408 Sum_probs=194.8
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
+.+.||+|+||.||+|...++..+|||.++.... ...++.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 8 ~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 86 (256)
T cd05113 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCL 86 (256)
T ss_pred EeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcH
Confidence 3467999999999999988777899999875443 456789999999999999999999999988889999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++.... ..+++..+++++.|++.||+||| +.+++|+||||+||++++++.+||+|||.++.....
T Consensus 87 ~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05113 87 LNYLREHG----KRFQPSQLLEMCKDVCEGMAYLE----SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS 158 (256)
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence 99997543 25899999999999999999999 889999999999999999999999999998755432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||.+. +..++.++|||||||++|||++ |+.||.... ..+...........
T Consensus 159 ~~~~~~~~y~~pe~~~--~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~------------~~~~~~~~~~~~~~---- 220 (256)
T cd05113 159 VGSKFPVRWSPPEVLL--YSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN------------NSETVEKVSQGLRL---- 220 (256)
T ss_pred CCCccChhhCCHHHHh--cCcccchhHHHHHHHHHHHHhcCCCCCcCcCC------------HHHHHHHHhcCCCC----
Confidence 122345799999664 4568899999999999999999 999985322 11122222111110
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
.. . ......+.+++.+||+.+|.+||++.++++.|+
T Consensus 221 ----~~-~--~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 ----YR-P--HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ----CC-C--CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 00 0 112346788999999999999999999998764
No 72
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.4e-37 Score=313.07 Aligned_cols=251 Identities=24% Similarity=0.375 Sum_probs=200.4
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+. .+++.||||.++... ......+.+|+++++.++||||+++++++.+.+..++|+||+++
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 86 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADA 86 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCC
Confidence 46799999999999995 478999999876422 22345788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++..... ....+++..+..++.|+++||+||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 87 ~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 87 GDLSQMIKYFKK-QKRLIPERTVWKYFVQLCSAVEHMH----SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred CcHHHHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHHh----hCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 999998864321 2245889999999999999999999 789999999999999999999999999998766432
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||.+. +..++.++||||||+++|||++|+.||.... .+...+.........
T Consensus 162 ~~~~~~~~~~~~aPE~~~--~~~~~~~~Di~slG~~l~el~~g~~p~~~~~----------~~~~~~~~~~~~~~~---- 225 (267)
T cd08228 162 AAHSLVGTPYYMSPERIH--ENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----------MNLFSLCQKIEQCDY---- 225 (267)
T ss_pred HHhcCCCCccccChhhhc--cCCCCchhhHHHHHHHHHHHhcCCCCCcccc----------ccHHHHHHHHhcCCC----
Confidence 345677899999664 4567889999999999999999999986432 122222222211110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
+.. ........+.+++.+||+.+|++||++.||++.+++++
T Consensus 226 --~~~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 226 --PPL----PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred --CCC----ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 000 01223356788899999999999999999999999874
No 73
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.2e-37 Score=327.91 Aligned_cols=246 Identities=22% Similarity=0.283 Sum_probs=195.4
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++..++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g 85 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPG 85 (333)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCC
Confidence 478999999999999965 58999999997532 22446788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--C
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--S 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--~ 518 (672)
|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.... .
T Consensus 86 ~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~ 156 (333)
T cd05600 86 GDFRTLLNNL-----GVLSEDHARFYMAEMFEAVDALH----ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYAN 156 (333)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccC
Confidence 9999999754 34889999999999999999999 78999999999999999999999999999976544 3
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||.... ..+......... ..+..
T Consensus 157 ~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~il~ell~g~~pf~~~~------------~~~~~~~i~~~~---~~~~~ 219 (333)
T cd05600 157 SVVGSPDYMAPEVLR--GKGYDFTVDYWSLGCMLYEFLCGFPPFSGST------------PNETWENLKYWK---ETLQR 219 (333)
T ss_pred CcccCccccChhHhc--CCCCCCccceecchHHHhhhhhCCCCCCCCC------------HHHHHHHHHhcc---ccccC
Confidence 456889999999765 4588999999999999999999999996432 111111111111 00000
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
.... ........++.+++.+||..+|.+||++.|+++.
T Consensus 220 ~~~~-~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 220 PVYD-DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCC-ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0000 0001123456788889999999999999999864
No 74
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4.6e-37 Score=317.22 Aligned_cols=250 Identities=26% Similarity=0.408 Sum_probs=200.5
Q ss_pred hcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.+.||+|+||.||+|... ++..+++|.++.......+.+.+|++++++++|+||+++++++...+..++||||+
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 89 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYM 89 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecC
Confidence 467999999999999842 35679999998766656678999999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEe
Q 005880 439 PNGSLFWLLHGNRG-----------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVS 507 (672)
Q Consensus 439 ~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~ 507 (672)
++++|.+++..... .....+++..+++++.|++.||+||| +.+|+||||||+||+++.++.++|+
T Consensus 90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~ 165 (291)
T cd05094 90 KHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA----SQHFVHRDLATRNCLVGANLLVKIG 165 (291)
T ss_pred CCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccCcceEEEccCCcEEEC
Confidence 99999999975431 11234899999999999999999999 8899999999999999999999999
Q ss_pred ccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCh
Q 005880 508 DFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDL 579 (672)
Q Consensus 508 DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~ 579 (672)
|||++...... ...++..|+|||.+. +..++.++|||||||++|||+| |+.||.... .
T Consensus 166 dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~el~t~g~~p~~~~~------------~ 231 (291)
T cd05094 166 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM--YRKFTTESDVWSFGVILWEIFTYGKQPWFQLS------------N 231 (291)
T ss_pred CCCcccccCCCceeecCCCCCcceeecChHHhc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------------H
Confidence 99999755332 233456799999654 4678899999999999999999 999986432 1
Q ss_pred hHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 580 PRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 580 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.+...... ....... .......+.+++.+||+.+|++|||+.+|+++|+++..
T Consensus 232 ~~~~~~~~-~~~~~~~----------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 232 TEVIECIT-QGRVLER----------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HHHHHHHh-CCCCCCC----------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 11222111 1111000 01123467889999999999999999999999999965
No 75
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.5e-37 Score=340.21 Aligned_cols=243 Identities=23% Similarity=0.253 Sum_probs=195.2
Q ss_pred HhcccCcCCeEEEEEEEEc-C-CcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-D-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~-g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.+.||+|+||.||+|... + ++.||+|.+..........+.+|+.+++.++||||+++++++..++..++||||+++|
T Consensus 71 ~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg 150 (478)
T PTZ00267 71 LTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGG 150 (478)
T ss_pred EEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCC
Confidence 4578999999999999844 3 6788899876554445567888999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.++++.... ...++++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 151 ~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH----~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 151 DLNKQIKQRLK-EHLPFQEYEVGLLFYQIVLALDEVH----SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHH----hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 99998864321 2346899999999999999999999 789999999999999999999999999999865432
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...||.+|+|||++. +..++.++|||||||++|||++|+.||... ...+.+........
T Consensus 226 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~------------~~~~~~~~~~~~~~--- 288 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWE--RKRYSKKADMWSLGVILYELLTLHRPFKGP------------SQREIMQQVLYGKY--- 288 (478)
T ss_pred ccccccCCCccccCHhHhC--CCCCCcHHhHHHHHHHHHHHHhCCCCCCCC------------CHHHHHHHHHhCCC---
Confidence 335788999999764 467899999999999999999999999642 12222222222211
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
++. + ......+.+++.+||..||++||++.+++.
T Consensus 289 --~~~----~--~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 289 --DPF----P--CPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --CCC----C--ccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 000 0 112235778888999999999999999864
No 76
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.9e-37 Score=324.61 Aligned_cols=193 Identities=24% Similarity=0.383 Sum_probs=167.0
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
...++||+|+||.||++... +|..+|+|.++... ......+.+|++++++++||||+++++++.++++.++||||+++
T Consensus 8 ~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 87 (333)
T cd06650 8 EKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 87 (333)
T ss_pred heeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCC
Confidence 44578999999999999965 68899999887542 22456789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... ..+++..+..++.|+++||.|||+ ..+|+||||||+||++++++.+||+|||++......
T Consensus 88 ~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH~---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~ 159 (333)
T cd06650 88 GSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 159 (333)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcc
Confidence 9999999754 248899999999999999999992 247999999999999999999999999998755332
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~y~aPE~~~--~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 160 NSFVGTRSYMSPERLQ--GTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred ccCCCCccccCHHHhc--CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 445788999999764 457889999999999999999999999643
No 77
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.4e-37 Score=318.72 Aligned_cols=235 Identities=24% Similarity=0.328 Sum_probs=189.2
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcch---HHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGG---KREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
+...||+|+||.||+|+. .+|..+|+|++++..... .+-++.|-.+|...++|.||+++..|.+.+..||||||++
T Consensus 145 ~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylP 224 (550)
T KOG0605|consen 145 LLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLP 224 (550)
T ss_pred hheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecC
Confidence 457899999999999994 469999999999765543 3456788999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
||++..+|.... .+++....-++.+++-|+..+| +.|+|||||||+|+|||..|++||+|||++..+..
T Consensus 225 GGD~mTLL~~~~-----~L~e~~arfYiaE~vlAI~~iH----~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 225 GGDMMTLLMRKD-----TLTEDWARFYIAETVLAIESIH----QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred CccHHHHHHhcC-----cCchHHHHHHHHHHHHHHHHHH----HcCcccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 999999998653 5999999999999999999999 89999999999999999999999999999842110
Q ss_pred --------------------------------------------------CCCCCCCcccCCCccccCCCCCCchhHHHH
Q 005880 518 --------------------------------------------------STVPRSNGYRAPELSSSDGRKQSQKSDVYS 547 (672)
Q Consensus 518 --------------------------------------------------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S 547 (672)
...+||+.|+|||++.. ..|+..+|.||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~--kgY~~~cDwWS 373 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG--KGYGKECDWWS 373 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc--CCCCccccHHH
Confidence 02356788999999874 46899999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCC
Q 005880 548 FGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQ 627 (672)
Q Consensus 548 ~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~ 627 (672)
+|||+|||+.|.+||..+... +-.+.+..-...... +.-.+...+..++|.+|+. ||++
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~------------~T~rkI~nwr~~l~f--------P~~~~~s~eA~DLI~rll~-d~~~ 432 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQ------------ETYRKIVNWRETLKF--------PEEVDLSDEAKDLITRLLC-DPEN 432 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHH------------HHHHHHHHHhhhccC--------CCcCcccHHHHHHHHHHhc-CHHH
Confidence 999999999999999865432 222233222211111 1111122456678889998 9999
Q ss_pred CCC
Q 005880 628 RPN 630 (672)
Q Consensus 628 RPt 630 (672)
|.-
T Consensus 433 RLG 435 (550)
T KOG0605|consen 433 RLG 435 (550)
T ss_pred hcC
Confidence 987
No 78
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.9e-37 Score=327.31 Aligned_cols=263 Identities=23% Similarity=0.304 Sum_probs=190.0
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccC--CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC-----eEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA--SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE-----EKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~ 435 (672)
+.+.||+|+||.||+|+.. +|..||||+++.. .......+.+|++++++++||||+++++++.... ..++||
T Consensus 4 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~ 83 (338)
T cd07859 4 IQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVF 83 (338)
T ss_pred EEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEE
Confidence 3578999999999999954 6899999998743 2234567889999999999999999999886432 479999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||++ ++|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 e~~~-~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 84 ELME-SDLHQVIKAN-----DDLTPEHHQFFLYQLLRALKYIH----TANVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred ecCC-CCHHHHHHhc-----ccCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9995 6899888644 34899999999999999999999 889999999999999999999999999999754
Q ss_pred CCC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCChhHHHH
Q 005880 516 PPS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG---CGGAVDLPRWVQ 584 (672)
Q Consensus 516 ~~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~~~ 584 (672)
... ...++..|+|||++......++.++|||||||++|||+||+.||.......... ...+.....+..
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 321 345788999999875433578999999999999999999999996532110000 000000111111
Q ss_pred HHHhhhccccccchhhcc-ccCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 585 SVVREEWTAEVFDLELMR-YKDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~-~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
...... ....++.-... .... ......+.+++.+||+.||++|||+.|+++.
T Consensus 234 ~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 234 RVRNEK-ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred Hhhhhh-HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 111000 00000000000 0000 0112356788999999999999999999853
No 79
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.2e-37 Score=318.35 Aligned_cols=258 Identities=29% Similarity=0.434 Sum_probs=194.9
Q ss_pred HhcccCcCCeEEEEEEEEc-----CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVLD-----DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 436 (672)
+.+.||+|+||.||++..+ ++..||+|+++.......+.+.+|++++++++||||+++++++... ...++|||
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 87 (284)
T cd05081 8 FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVME 87 (284)
T ss_pred eeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEE
Confidence 4578999999999999843 5789999999876655667899999999999999999999987643 46789999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|+++|+|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++...
T Consensus 88 ~~~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~aL~~LH----~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 88 YLPYGSLRDYLQKHR----ERLDHRKLLLYASQICKGMEYLG----SKRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred ecCCCCHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 999999999997543 35899999999999999999999 7899999999999999999999999999998664
Q ss_pred CCC--------CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCC--CCCC-CCCChhHHHHH
Q 005880 517 PST--------VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAG--MGCG-GAVDLPRWVQS 585 (672)
Q Consensus 517 ~~~--------~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~--~~~~-~~~~~~~~~~~ 585 (672)
... ..++..|+|||++. +..++.++|||||||++|||++|..|+........ .... ...........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhc--cCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence 321 11233599999664 55788999999999999999998877543211000 0000 00001111111
Q ss_pred HHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
...+.. ..+........+.+++.+||+.+|++||||.||++.|+.+
T Consensus 238 ~~~~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 238 LLKNNG----------RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHhcCC----------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 111110 0000112234688899999999999999999999999876
No 80
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.2e-37 Score=322.26 Aligned_cols=248 Identities=22% Similarity=0.364 Sum_probs=195.1
Q ss_pred HhcccCcCCeEEEEEEEEc-CCc----EEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGS----VVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
..+.||+|+||.||+|++. +|. .||+|.++... ....+++.+|+.+++.++||||++++|++... ..++|+||
T Consensus 11 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~ 89 (316)
T cd05108 11 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 89 (316)
T ss_pred eeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceeeeec
Confidence 3478999999999999853 344 48999987543 33467889999999999999999999999764 56799999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++....
T Consensus 90 ~~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH----~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 90 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLE----ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred CCCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHH----hcCeeccccchhheEecCCCcEEEccccccccccC
Confidence 99999999998643 35889999999999999999999 78999999999999999999999999999986643
Q ss_pred C-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 518 S-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 518 ~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
. ....+..|+|||++. +..++.++|||||||++|||++ |+.||.... ..++. .....
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~--~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~------------~~~~~-~~~~~ 226 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP------------ASEIS-SILEK 226 (316)
T ss_pred CCcceeccCCccceeecChHHhc--cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC------------HHHHH-HHHhC
Confidence 2 112245799999664 5678999999999999999998 999986421 11111 11111
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCC
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVE 645 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 645 (672)
... . +........+.+++.+||+.+|++||++.+++..+..+.+..
T Consensus 227 ~~~-------~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 227 GER-------L---PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred CCC-------C---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 100 0 000112345788999999999999999999999999886543
No 81
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.7e-37 Score=313.86 Aligned_cols=239 Identities=24% Similarity=0.352 Sum_probs=188.5
Q ss_pred cccCcCCeEEEEEEEEcC-------------CcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEE
Q 005880 366 EMLGKGGFGTAYKAVLDD-------------GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKL 432 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~-------------g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 432 (672)
+.||+|+||.||+|+..+ ...||+|.+..........+.+|+.++..++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998532 2358999887655445667889999999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc-------EE
Q 005880 433 LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN-------AR 505 (672)
Q Consensus 433 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~-------~k 505 (672)
+||||+++|+|..++.... ..+++..+++++.|+++||+||| +.+|+||||||+||+++.++. ++
T Consensus 81 lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS----DVLTTPWKFKVAKQLASALSYLE----DKDLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred EEEecccCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhh----hCCeECCCCCcccEEEecCCccCCCCceeE
Confidence 9999999999999887543 35899999999999999999999 889999999999999987664 89
Q ss_pred EeccCCCccCCCC-CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHH-hCCCCCCCCCCCCCCCCCCCCChhHHH
Q 005880 506 VSDFGLSIFAPPS-TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELL-TGKCPSVIDGGGAGMGCGGAVDLPRWV 583 (672)
Q Consensus 506 l~DfG~a~~~~~~-~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~-tg~~P~~~~~~~~~~~~~~~~~~~~~~ 583 (672)
++|||++...... ...++..|+|||.+. .+..++.++|||||||++|||+ +|+.||...... +.
T Consensus 153 l~d~g~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~------------~~- 218 (262)
T cd05077 153 LSDPGIPITVLSRQECVERIPWIAPECVE-DSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA------------EK- 218 (262)
T ss_pred eCCCCCCccccCcccccccccccChhhhc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh------------HH-
Confidence 9999998765433 445678899999753 2457889999999999999998 588887532111 00
Q ss_pred HHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 005880 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638 (672)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 638 (672)
........ .. .......+.+++.+||+.||.+||++.++++.+
T Consensus 219 ~~~~~~~~---------~~---~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 219 ERFYEGQC---------ML---VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHHhcCc---------cC---CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 11111100 00 011224577889999999999999999998876
No 82
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.7e-38 Score=309.14 Aligned_cols=265 Identities=23% Similarity=0.274 Sum_probs=194.9
Q ss_pred HhcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCc-eeeeEEEEEcCC------eEEE
Q 005880 364 SAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPN-LVGLKAYYFARE------EKLL 433 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~------~~~l 433 (672)
..++||+|+||+||+|+ ..+|+.||+|+++-... .......+|+.++++++|+| ||++++++...+ ..++
T Consensus 15 ~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~l 94 (323)
T KOG0594|consen 15 KVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYL 94 (323)
T ss_pred HHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEE
Confidence 34679999999999999 55799999999975433 24566789999999999999 999999999877 7789
Q ss_pred EEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 434 VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
||||++. +|..++....... ..++...+..++.|+++||+|+| +++|+||||||.||+|+++|.+||+|||+|+
T Consensus 95 vfe~~d~-DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H----~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 95 VFEFLDR-DLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLH----SHGILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred EEEeecc-cHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHH----hCCeecccCCcceEEECCCCcEeeeccchHH
Confidence 9999954 9999998655321 34666899999999999999999 8999999999999999999999999999998
Q ss_pred cCCCC-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC----CCCCCChhHHHH
Q 005880 514 FAPPS-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG----CGGAVDLPRWVQ 584 (672)
Q Consensus 514 ~~~~~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~----~~~~~~~~~~~~ 584 (672)
...-. ....|..|+|||++... ..|++..||||+|||+.||+++++-|.++.+.+... .-+......|-.
T Consensus 169 a~~ip~~~yt~evvTlWYRaPEvLlGs-~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~ 247 (323)
T KOG0594|consen 169 AFSIPMRTYTPEVVTLWYRAPEVLLGS-TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPG 247 (323)
T ss_pred HhcCCcccccccEEEeeccCHHHhcCC-CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCC
Confidence 66522 44567889999998754 469999999999999999999999987654321100 000000000100
Q ss_pred HHHhhhccccccchhhccccChHH----HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 585 SVVREEWTAEVFDLELMRYKDIEE----EMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~----~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
...-.++...... ......... ......+++.+|++.+|++|.|++.+++.
T Consensus 248 v~~~~~~k~~f~~--~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 248 VSSLPDYKAPFPK--WPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccccccccccCcC--CCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 0000000000000 000011111 11356788889999999999999999865
No 83
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2e-37 Score=321.81 Aligned_cols=190 Identities=25% Similarity=0.369 Sum_probs=162.7
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|+.. +|+.||||+++.... .....+.+|++++++++||||+++++++.+++..++||||++ ++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~ 88 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TD 88 (303)
T ss_pred eeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cC
Confidence 478999999999999965 689999999875432 234567889999999999999999999999999999999995 68
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 89 l~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 160 (303)
T cd07869 89 LCQYMDKHP----GGLHPENVKLFLFQLLRGLSYIH----QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTY 160 (303)
T ss_pred HHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccC
Confidence 888876543 34889999999999999999999 889999999999999999999999999998654321
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
...++..|+|||++.. ...++.++||||+||++|||++|+.||..
T Consensus 161 ~~~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~il~~l~~g~~pf~~ 206 (303)
T cd07869 161 SNEVVTLWYRPPDVLLG-STEYSTCLDMWGVGCIFVEMIQGVAAFPG 206 (303)
T ss_pred CCCcccCCCCChHHHcC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 3456788999997642 34678899999999999999999999974
No 84
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.6e-37 Score=325.30 Aligned_cols=236 Identities=23% Similarity=0.350 Sum_probs=189.4
Q ss_pred cccCcCCeEEEEEEEE----cCCcEEEEEEcccCC----cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDAS----IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
+.||+|+||.||+++. .+++.||||+++... ......+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999985 357899999987532 12345678899999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++|+|.+++.... .+.+..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 152 (323)
T cd05584 82 LSGGELFMHLEREG-----IFMEDTACFYLSEISLALEHLH----QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIH 152 (323)
T ss_pred CCCchHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCCEEEeeCcCCeeccc
Confidence 99999999997542 4788899999999999999999 78999999999999999999999999999864322
Q ss_pred C-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 518 S-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 518 ~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
. ...++..|+|||++. +..++.++|||||||++|||++|+.||.... ....+........
T Consensus 153 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~G~~pf~~~~------------~~~~~~~~~~~~~- 217 (323)
T cd05584 153 EGTVTHTFCGTIEYMAPEILM--RSGHGKAVDWWSLGALMYDMLTGAPPFTAEN------------RKKTIDKILKGKL- 217 (323)
T ss_pred CCCcccccCCCccccChhhcc--CCCCCCcceecccHHHHHHHhcCCCCCCCCC------------HHHHHHHHHcCCC-
Confidence 1 345788999999764 4567899999999999999999999996432 1222222222210
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVK 636 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 636 (672)
..... ....+.+++.+||+.||++|| ++.++++
T Consensus 218 --------~~~~~---~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 218 --------NLPPY---LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred --------CCCCC---CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 01111 123567888899999999999 7888765
No 85
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.4e-38 Score=323.83 Aligned_cols=243 Identities=23% Similarity=0.346 Sum_probs=206.9
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCe-EEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREE-KLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv~e~~~ 439 (672)
..+.+|+|+||.++.++.+ ++..+++|.+.-.. ...++...+|+.++++++|||||.+.+.+..++. .+|||+|++
T Consensus 8 ~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~e 87 (426)
T KOG0589|consen 8 VLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCE 87 (426)
T ss_pred hhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecC
Confidence 4578999999999999854 67899999987433 3345578899999999999999999999998888 899999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
||++.+.+...+ ...++++.+.+++.|++.|+.||| +..|+|||||+.||+++.++.+||+|||+|+...+.
T Consensus 88 Gg~l~~~i~~~k---~~~f~E~~i~~~~~Q~~~av~ylH----~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 88 GGDLAQLIKEQK---GVLFPEERILKWFVQILLAVNYLH----ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred CCCHHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHH----hhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 999999998766 356899999999999999999999 789999999999999999999999999999988775
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...||+.|+.||++. +..|..|+||||+||++|||++-+++|... +....+.++.+..
T Consensus 161 ~~a~tvvGTp~YmcPEil~--d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~------------~m~~Li~ki~~~~---- 222 (426)
T KOG0589|consen 161 SLASTVVGTPYYMCPEILS--DIPYNEKSDIWSLGCCLYEMCTLKPAFKAS------------NMSELILKINRGL---- 222 (426)
T ss_pred hhhheecCCCcccCHHHhC--CCCCCccCcchhhcchHHHHHhcccccCcc------------chHHHHHHHhhcc----
Confidence 478999999999775 679999999999999999999999999743 4444555444442
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 638 (672)
+++ -...+..++..++..|++.+|+.||++.+++.+-
T Consensus 223 -~~P------lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P 259 (426)
T KOG0589|consen 223 -YSP------LPSMYSSELRSLVKSMLRKNPEHRPSALELLRRP 259 (426)
T ss_pred -CCC------CCccccHHHHHHHHHHhhcCCccCCCHHHHhhCh
Confidence 111 1133455788889999999999999999999873
No 86
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.8e-37 Score=315.83 Aligned_cols=238 Identities=24% Similarity=0.350 Sum_probs=186.6
Q ss_pred ccCcCCeEEEEEEEEcC-------------------------CcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeee
Q 005880 367 MLGKGGFGTAYKAVLDD-------------------------GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~~~~-------------------------g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 421 (672)
.||+|+||.||+|.+.. ...||+|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999998421 13589999876544445678889999999999999999
Q ss_pred EEEEEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC
Q 005880 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT 501 (672)
Q Consensus 422 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~ 501 (672)
++++.++...++||||+++|+|..++.... ..+++..+.+++.|+++||+||| +.+|+||||||+||+++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH----~~~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK----GRVPVAWKITVAQQLASALSYLE----DKNLVHGNVCAKNILLARL 153 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----cCCccCCCCCcccEEEecc
Confidence 999999999999999999999999987533 35889999999999999999999 7899999999999999764
Q ss_pred C-------cEEEeccCCCccCCC-CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHH-hCCCCCCCCCCCCCCC
Q 005880 502 G-------NARVSDFGLSIFAPP-STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELL-TGKCPSVIDGGGAGMG 572 (672)
Q Consensus 502 ~-------~~kl~DfG~a~~~~~-~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~-tg~~P~~~~~~~~~~~ 572 (672)
+ .+|++|||.+..... ....++..|+|||.+.. ...++.++|||||||++|||+ +|+.||......
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~-~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---- 228 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPG-GNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS---- 228 (274)
T ss_pred CcccCccceeeecCCccccccccccccccCCcccCchhhcC-CCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH----
Confidence 4 389999998864433 24456788999997643 356889999999999999994 799998643211
Q ss_pred CCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 005880 573 CGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638 (672)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 638 (672)
.... ...... .. + ......+.+++.+||+.+|++|||+.+|++.|
T Consensus 229 -----~~~~----~~~~~~-------~~---~--~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 229 -----EKER----FYEKKH-------RL---P--EPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred -----HHHH----HHHhcc-------CC---C--CCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 1111 111100 00 0 01123578889999999999999999999876
No 87
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=7.6e-37 Score=310.14 Aligned_cols=245 Identities=28% Similarity=0.448 Sum_probs=196.1
Q ss_pred HHHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 362 RASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.+.+.||+|+||.||+|...++..||+|.++.... ..+.+.+|+.++++++|+|++++++++. ....++||||++++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~ 85 (260)
T cd05070 8 LQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKG 85 (260)
T ss_pred hhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCC
Confidence 345688999999999999988888999999876443 4567999999999999999999999874 55688999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.++++... ...+++.++..++.|++.||+||| +.+|+||||||+||++++++.++|+|||++......
T Consensus 86 ~L~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05070 86 SLLDFLKDGE---GRALKLPNLVDMAAQVAAGMAYIE----RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred cHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence 9999997543 235899999999999999999999 789999999999999999999999999999765432
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...++..|+|||.+. +..++.++||||||+++|||++ |+.||.... ..+......... ..
T Consensus 159 ~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~------------~~~~~~~~~~~~-~~- 222 (260)
T cd05070 159 ARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELVTKGRVPYPGMN------------NREVLEQVERGY-RM- 222 (260)
T ss_pred cccCCCCCccccChHHHh--cCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC------------HHHHHHHHHcCC-CC-
Confidence 122345799999653 5678899999999999999999 899986432 112222221110 00
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
+........+.+++.+|+..+|.+|||+.++.+.|++
T Consensus 223 ---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 ---------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0011223468889999999999999999999999875
No 88
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=6.1e-37 Score=310.12 Aligned_cols=242 Identities=26% Similarity=0.427 Sum_probs=194.3
Q ss_pred HHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.+.||+|+||.||+|..+++..+|+|.+..... ...++.+|++++++++||||+++++++...+..++||||+++++
T Consensus 7 ~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (256)
T cd05059 7 TFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGC 85 (256)
T ss_pred chhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCC
Confidence 35678999999999999988778899999865433 45678899999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCC---
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--- 519 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~--- 519 (672)
|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++......
T Consensus 86 L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~ 157 (256)
T cd05059 86 LLNYLRERK----GKLGTEWLLDMCSDVCEAMEYLE----SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS 157 (256)
T ss_pred HHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH----HCCcccccccHhhEEECCCCcEEECCcccceecccccccc
Confidence 999997543 25899999999999999999999 7899999999999999999999999999987654321
Q ss_pred ---CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 520 ---VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 520 ---~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...+..|+|||.+. +..++.++||||||+++|||++ |+.||...... +..... ....
T Consensus 158 ~~~~~~~~~y~~Pe~~~--~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------------~~~~~~-~~~~---- 218 (256)
T cd05059 158 SQGTKFPVKWAPPEVFD--YSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS------------EVVESV-SAGY---- 218 (256)
T ss_pred cCCCCCCccccCHHHhc--cCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH------------HHHHHH-HcCC----
Confidence 11234699999664 4578899999999999999999 89998643211 111111 1110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 638 (672)
.. ... .....++.+++.+||..+|++|||+.|+++.|
T Consensus 219 -~~--~~~---~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 219 -RL--YRP---KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -cC--CCC---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 00 001 11334688899999999999999999999876
No 89
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=7.6e-37 Score=311.25 Aligned_cols=245 Identities=25% Similarity=0.416 Sum_probs=196.6
Q ss_pred HhcccCcCCeEEEEEEEEcC----CcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVLDD----GSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
..+.||+|+||.||+|.+.. ...||||.++.... ....+|.+|+.++++++||||+++++++...+..++||||+
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 87 (266)
T cd05033 8 IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYM 87 (266)
T ss_pred eeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcC
Confidence 45789999999999999642 45899999875433 24567899999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++++|.+++.... ..+++..+++++.|++.||+||| +.+|+||||||+||++++++.++|+|||+++.....
T Consensus 88 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh----~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 88 ENGSLDKFLREND----GKFTVGQLVGMLRGIASGMKYLS----EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred CCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 9999999997643 35899999999999999999999 789999999999999999999999999999876421
Q ss_pred -------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 519 -------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 519 -------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
....+..|+|||.+. +..++.++||||||+++|||++ |..||.... ..+........
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~--~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~------------~~~~~~~~~~~- 224 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIA--YRKFTSASDVWSFGIVMWEVMSYGERPYWDMS------------NQDVIKAVEDG- 224 (266)
T ss_pred ccceeccCCCCCccccChhhhc--cCCCccccchHHHHHHHHHHHccCCCCCCCCC------------HHHHHHHHHcC-
Confidence 122345799999654 4678899999999999999998 999985321 11111111111
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
... +........+.+++.+||+.+|++||++.||++.|+++
T Consensus 225 ~~~----------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 225 YRL----------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000 00112234678999999999999999999999999876
No 90
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=8.1e-37 Score=310.35 Aligned_cols=245 Identities=29% Similarity=0.436 Sum_probs=195.2
Q ss_pred HHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.++||+|+||.||+|...++..||+|+++.... ..+++.+|++++++++||||+++++++. .+..++||||+++|+
T Consensus 9 ~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~ 86 (262)
T cd05071 9 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGS 86 (262)
T ss_pred eEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCc
Confidence 34578999999999999987777899999975433 4567899999999999999999999874 456789999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ...+++..+..++.|+++||+||| +.+++||||||+||++++++.+||+|||.++.....
T Consensus 87 L~~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH----~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 87 LLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred HHHHHhhcc---ccCCCHHHHHHHHHHHHHHHHHHH----HCCccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence 999997543 235799999999999999999999 789999999999999999999999999999765433
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||+.. +..++.++||||||+++|||+| |+.||..... .+...... ...
T Consensus 160 ~~~~~~~~~y~~PE~~~--~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~------------~~~~~~~~-~~~---- 220 (262)
T cd05071 160 RQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------------REVLDQVE-RGY---- 220 (262)
T ss_pred ccCCcccceecCHhHhc--cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh------------HHHHHHHh-cCC----
Confidence 122345799999653 5678999999999999999999 8888854321 11111111 100
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
......+....+.+++.+|++.||++||++.++++.|++.
T Consensus 221 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 221 ------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 0011123345688999999999999999999999999875
No 91
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=7.4e-37 Score=314.36 Aligned_cols=248 Identities=27% Similarity=0.373 Sum_probs=194.3
Q ss_pred HhcccCcCCeEEEEEEEE-----cCCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVL-----DDGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
+.+.||+|+||.||+|.. .++..||+|.++.... ....++.+|++++++++||||+++++++......++||||
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 88 (283)
T cd05090 9 FMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEY 88 (283)
T ss_pred eeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEc
Confidence 347899999999999984 2467899999975332 2346789999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEE
Q 005880 438 MPNGSLFWLLHGNRG------------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNAR 505 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~k 505 (672)
+++|+|.+++..... .....+++.++..++.|++.||+||| +.+|+||||||+||++++++.+|
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~i~H~dlkp~nili~~~~~~k 164 (283)
T cd05090 89 LNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS----SHFFVHKDLAARNILIGEQLHVK 164 (283)
T ss_pred CCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH----hcCeehhccccceEEEcCCCcEE
Confidence 999999999863321 11235889999999999999999999 78999999999999999999999
Q ss_pred EeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCC
Q 005880 506 VSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAV 577 (672)
Q Consensus 506 l~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~ 577 (672)
|+|||+++..... ...++..|+|||++. +..++.++|||||||++|||++ |..||....
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~----------- 231 (283)
T cd05090 165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIM--YGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS----------- 231 (283)
T ss_pred eccccccccccCCcceecccCCCccceecChHHhc--cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC-----------
Confidence 9999999765332 223456799999664 4578999999999999999998 998985421
Q ss_pred ChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 578 DLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
...... ......... .. ......+.+++.+||+.||++||++.+|.+.|+.
T Consensus 232 -~~~~~~-~~~~~~~~~-------~~---~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 232 -NQEVIE-MVRKRQLLP-------CS---EDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -HHHHHH-HHHcCCcCC-------CC---CCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111111 111111000 00 1123457788889999999999999999998864
No 92
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3e-37 Score=314.36 Aligned_cols=246 Identities=23% Similarity=0.332 Sum_probs=194.1
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
..+.||+|+||.||+|+. .+|+.||+|++..........+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 13 ~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~ 92 (267)
T cd06646 13 LIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGS 92 (267)
T ss_pred hhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCc
Confidence 457899999999999995 5689999999875544455678899999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.++++.. .++++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 93 L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~ 163 (267)
T cd06646 93 LQDIYHVT-----GPLSELQIAYVCRETLQGLAYLH----SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKR 163 (267)
T ss_pred HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEECCCCCEEECcCccceeeccccccc
Confidence 99998643 34899999999999999999999 789999999999999999999999999998765432
Q ss_pred -CCCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 -TVPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||.+.. ....++.++|||||||++|||++|+.||........ . ...... .+
T Consensus 164 ~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~--------~----~~~~~~-----~~ 226 (267)
T cd06646 164 KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--------L----FLMSKS-----NF 226 (267)
T ss_pred CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh--------h----eeeecC-----CC
Confidence 3346778999997643 234578899999999999999999999854321110 0 000000 00
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
.+. ...........+.+++.+||..+|++|||++++++.
T Consensus 227 ~~~--~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 227 QPP--KLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred CCC--CCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 000 001111223467888999999999999999999864
No 93
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.6e-37 Score=319.92 Aligned_cols=262 Identities=19% Similarity=0.190 Sum_probs=191.6
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+++++.++||||+++++++..++..++||||+++
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (287)
T cd07848 5 VLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEK 84 (287)
T ss_pred EEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCC
Confidence 3578999999999999965 68899999987532 22356788999999999999999999999999999999999998
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
+.+..+.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 85 NMLELLEEMP-----NGVPPEKVRSYIYQLIKAIHWCH----KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 8776554322 34899999999999999999999 889999999999999999999999999999765432
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCChhHHHHHHHhhhc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG---CGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 591 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||......+... ...+.....+.........
T Consensus 156 ~~~~~~~~~~~y~aPE~~~--~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 156 ANYTEYVATRWYRSPELLL--GAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred ccccccccccccCCcHHHc--CCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence 345788899999764 4568899999999999999999999997542211000 0000000001110000000
Q ss_pred cccccchhhccccC-----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 TAEVFDLELMRYKD-----IEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 ~~~~~d~~~~~~~~-----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
......+....... .......+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000000000 0112345889999999999999999999874
No 94
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.7e-37 Score=317.64 Aligned_cols=263 Identities=24% Similarity=0.345 Sum_probs=204.3
Q ss_pred cCHHHHHHHHhcccCcCCeEEEEEEEEc--------CCcEEEEEEcccCC-cchHHHHHHHHHHHcCC-CCCceeeeEEE
Q 005880 355 FELEDLLRASAEMLGKGGFGTAYKAVLD--------DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRL-RHPNLVGLKAY 424 (672)
Q Consensus 355 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 424 (672)
+++..-.+...+.||+|+||.||+|+.. ++..||+|.++... ....+++.+|+.+++.+ +||||++++++
T Consensus 10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 89 (304)
T cd05101 10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA 89 (304)
T ss_pred ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence 3444444456688999999999999741 24579999987542 23456789999999999 89999999999
Q ss_pred EEcCCeEEEEEeecCCCChhHHhhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCC
Q 005880 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGP-----------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKS 493 (672)
Q Consensus 425 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp 493 (672)
+......++||||+++|+|.+++...... ....+++.++..++.|+++||+||| +.+|+||||||
T Consensus 90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH----~~givH~dlkp 165 (304)
T cd05101 90 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA----SQKCIHRDLAA 165 (304)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH----HCCeeeccccc
Confidence 99999999999999999999999764321 1235889999999999999999999 78999999999
Q ss_pred CCEEeCCCCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 005880 494 TNVLLDKTGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVID 565 (672)
Q Consensus 494 ~NIll~~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~ 565 (672)
+||++++++.+||+|||+++..... ...++..|+|||++. +..++.++||||||+++|||++ |..||...
T Consensus 166 ~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 166 RNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred ceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhc--cCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 9999999999999999999765432 122346799999764 4578899999999999999998 78887532
Q ss_pred CCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCC
Q 005880 566 GGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVE 645 (672)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 645 (672)
...++......... .. . .......+.+++.+||+.+|.+|||+.||++.|+++....
T Consensus 244 ------------~~~~~~~~~~~~~~-~~-------~---~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 244 ------------PVEELFKLLKEGHR-MD-------K---PANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred ------------CHHHHHHHHHcCCc-CC-------C---CCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 22333332221110 00 0 1123346778888999999999999999999999987654
Q ss_pred C
Q 005880 646 V 646 (672)
Q Consensus 646 ~ 646 (672)
+
T Consensus 301 ~ 301 (304)
T cd05101 301 T 301 (304)
T ss_pred h
Confidence 4
No 95
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.8e-37 Score=313.42 Aligned_cols=249 Identities=24% Similarity=0.322 Sum_probs=196.1
Q ss_pred HHhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEE
Q 005880 363 ASAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 435 (672)
.+.+.||+|+||.||+|... ++..||+|+++..... ..+.+.+|+.++..++||||+++++++......++++
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (283)
T cd05091 8 RFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIF 87 (283)
T ss_pred HHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEE
Confidence 45678999999999999853 2578999999754432 3467889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcE
Q 005880 436 EYMPNGSLFWLLHGNRG-----------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNA 504 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~ 504 (672)
||+++++|.+++..... .....+++..+..++.|+++||+||| +.+|+||||||+||++++++.+
T Consensus 88 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH----~~gi~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05091 88 SYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS----SHHVVHKDLATRNVLVFDKLNV 163 (283)
T ss_pred EcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH----HcCccccccchhheEecCCCce
Confidence 99999999999853210 11245889999999999999999999 8899999999999999999999
Q ss_pred EEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCC
Q 005880 505 RVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGA 576 (672)
Q Consensus 505 kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~ 576 (672)
||+|||+++..... ...++..|+|||.+. +..++.++|||||||++|||++ |..||...
T Consensus 164 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~----------- 230 (283)
T cd05091 164 KISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIM--YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY----------- 230 (283)
T ss_pred EecccccccccccchheeeccCccCCccccCHHHHh--cCCCCcchhHHHHHHHHHHHHcCCCCCCCCC-----------
Confidence 99999998765332 223356899999654 4568899999999999999998 88887532
Q ss_pred CChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 577 VDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
...++...+...... .........+.+++.+||+.+|++||+++||++.|+.
T Consensus 231 -~~~~~~~~i~~~~~~-----------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 231 -SNQDVIEMIRNRQVL-----------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred -CHHHHHHHHHcCCcC-----------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 122233322222110 0011233457888999999999999999999998863
No 96
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1e-36 Score=326.38 Aligned_cols=260 Identities=23% Similarity=0.346 Sum_probs=200.2
Q ss_pred cCHHHHHHHHhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCcc-hHHHHHHHHHHHcCCC-CCceeeeEEEEE
Q 005880 355 FELEDLLRASAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASIG-GKREFEQHMEVLGRLR-HPNLVGLKAYYF 426 (672)
Q Consensus 355 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 426 (672)
+++..-...+.+.||+|+||.||+|++. .+..||||+++..... ..+.+.+|++++.++. ||||+++++++.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 3333333356789999999999999864 2468999999754322 3457889999999997 999999999999
Q ss_pred cCCeEEEEEeecCCCChhHHhhcCCC------------------------------------------------------
Q 005880 427 AREEKLLVSEYMPNGSLFWLLHGNRG------------------------------------------------------ 452 (672)
Q Consensus 427 ~~~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------ 452 (672)
.++..++||||+++|+|.++++....
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 99999999999999999999975421
Q ss_pred ---------------------------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCC
Q 005880 453 ---------------------------------------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKS 493 (672)
Q Consensus 453 ---------------------------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp 493 (672)
.....+++..+.+++.|+++||+||| +.+|+||||||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrdlkp 267 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA----SKNCVHRDLAA 267 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh----cCCcCcccCCc
Confidence 01234788899999999999999999 78999999999
Q ss_pred CCEEeCCCCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 005880 494 TNVLLDKTGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVID 565 (672)
Q Consensus 494 ~NIll~~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~ 565 (672)
+||++++++.+||+|||+++..... ...++..|+|||.+. +..++.++|||||||++|||++ |+.||...
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwslGvil~e~l~~g~~P~~~~ 345 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIF--NNLYTTLSDVWSFGILLWEIFTLGGTPYPEL 345 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhc--CCCCCcHhHHHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999999754321 233466799999764 4568899999999999999998 88898532
Q ss_pred CCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 566 GGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
. ..+........+.. ..... ....++.+++.+||..+|++||++.||++.|+.+.
T Consensus 346 ~------------~~~~~~~~~~~~~~-------~~~p~---~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 346 P------------MNEQFYNAIKRGYR-------MAKPA---HASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred C------------chHHHHHHHHcCCC-------CCCCC---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1 11111111111110 00011 12345788888999999999999999999999864
No 97
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=6.1e-37 Score=322.51 Aligned_cols=254 Identities=25% Similarity=0.353 Sum_probs=196.1
Q ss_pred HHHhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCc-chHHHHHHHHHHHcCC-CCCceeeeEEEEEcC-CeEE
Q 005880 362 RASAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASI-GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAR-EEKL 432 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~~~~ 432 (672)
+.+.+.||+|+||.||+|... +++.||+|+++.... ...+.+.+|++++.++ +|+||+++++++... ...+
T Consensus 9 ~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~ 88 (337)
T cd05054 9 LKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLM 88 (337)
T ss_pred hhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEE
Confidence 345688999999999999732 247899999975432 2345678899999999 899999999988754 5678
Q ss_pred EEEeecCCCChhHHhhcCCCC--------------------------------------------------------CCC
Q 005880 433 LVSEYMPNGSLFWLLHGNRGP--------------------------------------------------------GRT 456 (672)
Q Consensus 433 lv~e~~~~g~L~~~l~~~~~~--------------------------------------------------------~~~ 456 (672)
++|||+++|+|.+++...... ...
T Consensus 89 ~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (337)
T cd05054 89 VIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKE 168 (337)
T ss_pred EEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhc
Confidence 999999999999998643210 013
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-------CCCCCCcccCC
Q 005880 457 PLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-------TVPRSNGYRAP 529 (672)
Q Consensus 457 ~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aP 529 (672)
+++|..+.+++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++..... ...++..|+||
T Consensus 169 ~l~~~~~~~~~~qi~~aL~~lH----~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP 244 (337)
T cd05054 169 PLTLEDLISYSFQVARGMEFLA----SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 244 (337)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence 6899999999999999999999 789999999999999999999999999999765322 22335679999
Q ss_pred CccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHH
Q 005880 530 ELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEE 608 (672)
Q Consensus 530 E~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (672)
|++. +..++.++|||||||++|||++ |+.||...... +............. ....
T Consensus 245 E~~~--~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~------------~~~~~~~~~~~~~~----------~~~~ 300 (337)
T cd05054 245 ESIF--DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID------------EEFCRRLKEGTRMR----------APEY 300 (337)
T ss_pred HHhc--CCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc------------HHHHHHHhccCCCC----------CCcc
Confidence 9664 5678999999999999999998 99998642211 11111111111000 0012
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 609 EMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 609 ~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
...++.+++.+||+.+|++||++.||++.|+++.+
T Consensus 301 ~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 301 ATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 23467889999999999999999999999998764
No 98
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.6e-37 Score=313.69 Aligned_cols=248 Identities=22% Similarity=0.331 Sum_probs=194.1
Q ss_pred HhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
..+.||+|+||.||+|... ++..||||+++... .....++.+|+.+++.++||||+++++++..+...++|||
T Consensus 10 ~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e 89 (277)
T cd05062 10 MSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 89 (277)
T ss_pred eeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEe
Confidence 4578999999999999853 25679999986432 2345678899999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcCCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCC
Q 005880 437 YMPNGSLFWLLHGNRGP-----GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL 511 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~ 511 (672)
|+++|+|.+++...... ....+++..+..++.|+++||+||| +.+++||||||+||++++++.++|+|||+
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~~vH~dlkp~Nil~~~~~~~~l~dfg~ 165 (277)
T cd05062 90 LMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGM 165 (277)
T ss_pred cCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCcchheEEEcCCCCEEECCCCC
Confidence 99999999999753311 1235788999999999999999999 78999999999999999999999999999
Q ss_pred CccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHH
Q 005880 512 SIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWV 583 (672)
Q Consensus 512 a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~ 583 (672)
++..... ...++..|+|||++. +..++.++|||||||++|||++ |..||.... ..+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~------------~~~~~ 231 (277)
T cd05062 166 TRDIYETDYYRKGGKGLLPVRWMSPESLK--DGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS------------NEQVL 231 (277)
T ss_pred ccccCCcceeecCCCCccCHhhcChhHhh--cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC------------HHHHH
Confidence 8755332 123356799999764 4678999999999999999999 788885331 12222
Q ss_pred HHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
....... .... . ......+.+++.+||+.+|++|||+.|+++.|++
T Consensus 232 ~~~~~~~-~~~~-------~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 232 RFVMEGG-LLDK-------P---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHcCC-cCCC-------C---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 2211111 1000 0 1123457889999999999999999999998863
No 99
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=9.9e-37 Score=311.38 Aligned_cols=249 Identities=24% Similarity=0.327 Sum_probs=192.2
Q ss_pred HhcccCcCCeEEEEEEEEcC-Cc--EEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC------CeEE
Q 005880 364 SAEMLGKGGFGTAYKAVLDD-GS--VVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR------EEKL 432 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~-g~--~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~ 432 (672)
+.+.||+|+||.||+|...+ +. .||+|.++... ....+.+.+|+++++.++|+||+++++++... ...+
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence 45789999999999999654 33 68999887532 33456789999999999999999999987542 2468
Q ss_pred EEEeecCCCChhHHhhcCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCC
Q 005880 433 LVSEYMPNGSLFWLLHGNRG-PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL 511 (672)
Q Consensus 433 lv~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~ 511 (672)
+||||+++|+|.+++..... .....+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS----SKSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH----HCCeeccccchhheEEcCCCCEEECCCCc
Confidence 99999999999988753321 12345899999999999999999999 78999999999999999999999999999
Q ss_pred CccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHH
Q 005880 512 SIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWV 583 (672)
Q Consensus 512 a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~ 583 (672)
++..... ....+..|+|||.+. +..++.++||||||+++|||++ |+.||.... ..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------------~~~~~ 224 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLA--DRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE------------NSEIY 224 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHcc--CCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC------------HHHHH
Confidence 9865432 123455799999654 5678999999999999999999 788885321 11122
Q ss_pred HHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
........ .. .. ......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 225 ~~~~~~~~-~~-------~~---~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 225 DYLRQGNR-LK-------QP---PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHHHcCCC-CC-------CC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 22111110 00 00 11234578899999999999999999999999875
No 100
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.8e-37 Score=313.31 Aligned_cols=250 Identities=26% Similarity=0.299 Sum_probs=189.2
Q ss_pred ccCcCCeEEEEEEEEcC---CcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 367 MLGKGGFGTAYKAVLDD---GSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~~~~---g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.||+|+||.||+|...+ +..+|+|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 58999999999998643 46799999875432 344578899999999999999999999999889999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.++++..........++..+..++.|+++||+||| +.+++||||||+||++++++++||+|||+++.....
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH----KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH----HCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 999997654323345778888999999999999999 789999999999999999999999999998654322
Q ss_pred ---CCCCCCcccCCCccccCC-----CCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 519 ---TVPRSNGYRAPELSSSDG-----RKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~-----~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
...++..|+|||++.... ..++.++||||||+++|||++ |+.||...... +.......+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~------------~~~~~~~~~ 225 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE------------QVLTYTVRE 225 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH------------HHHHHHhhc
Confidence 233466799999874321 245789999999999999996 99999643211 111111111
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
......++.... .....+.+++..|+ .+|++|||++||++.|+
T Consensus 226 -~~~~~~~~~~~~-----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 226 -QQLKLPKPRLKL-----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred -ccCCCCCCccCC-----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111111111110 11234667778998 68999999999998874
No 101
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.1e-37 Score=316.23 Aligned_cols=256 Identities=26% Similarity=0.353 Sum_probs=193.6
Q ss_pred HhcccCcCCeEEEEEEEE-----cCCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVL-----DDGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 435 (672)
..+.||+|+||.||++.. .++..||+|.++.... .....+.+|++++++++||||+++++++... ...++||
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (283)
T cd05080 8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIM 87 (283)
T ss_pred eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEe
Confidence 347899999999988653 3578899999875432 2456788999999999999999999988754 3578999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+++|+|.+++... .+++.++..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 88 e~~~~~~l~~~~~~~------~l~~~~~~~i~~~l~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 88 EYVPLGSLRDYLPKH------KLNLAQLLLFAQQICEGMAYLH----SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred cCCCCCCHHHHHHHc------CCCHHHHHHHHHHHHHHHHHHH----HCCeeccccChheEEEcCCCcEEEeeccccccc
Confidence 999999999999753 3899999999999999999999 789999999999999999999999999999765
Q ss_pred CCC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCC--CCCCCC-CCChhHHHH
Q 005880 516 PPS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGA--GMGCGG-AVDLPRWVQ 584 (672)
Q Consensus 516 ~~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~--~~~~~~-~~~~~~~~~ 584 (672)
... ...++..|+|||.+. +..++.++||||||+++|||+||+.||....... ...... ......+ .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~--~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~ 234 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLK--ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRL-I 234 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhc--ccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhh-h
Confidence 432 122345699999654 4578899999999999999999999985432110 000000 0000000 0
Q ss_pred HHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 585 SVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
.. .+... ..+.......++.+++.+||+.+|++|||+++|++.|+++.
T Consensus 235 ~~---------~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 235 EL---------LERGM-RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hh---------hhcCC-CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 00 00000 00001123356888999999999999999999999999875
No 102
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.4e-36 Score=306.20 Aligned_cols=241 Identities=28% Similarity=0.424 Sum_probs=193.7
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
++||+|+||.||+|...++..||+|.++.... .....+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988899999999875443 23457889999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC------
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS------ 518 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~------ 518 (672)
+++.... ..+++..+..++.|++.||.||| +.+++||||||+||++++++.+||+|||++......
T Consensus 81 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH----~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (250)
T cd05085 81 SFLRKKK----DELKTKQLVKFALDAAAGMAYLE----SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSG 152 (250)
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccChheEEEcCCCeEEECCCccceeccccccccCC
Confidence 9986543 34889999999999999999999 889999999999999999999999999998754432
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
....+..|+|||++. +..++.++||||||+++||+++ |..||.... ....... ........
T Consensus 153 ~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~------------~~~~~~~-~~~~~~~~--- 214 (250)
T cd05085 153 LKQIPIKWTAPEALN--YGRYSSESDVWSYGILLWETFSLGVCPYPGMT------------NQQAREQ-VEKGYRMS--- 214 (250)
T ss_pred CCCCcccccCHHHhc--cCCCCchhHHHHHHHHHHHHhcCCCCCCCCCC------------HHHHHHH-HHcCCCCC---
Confidence 112345699999664 4578899999999999999998 999986432 1111111 11111000
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
........+.+++.+|++.+|++||++.|+++.|.
T Consensus 215 -------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 215 -------CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred -------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 00112346788999999999999999999998874
No 103
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.1e-37 Score=326.99 Aligned_cols=236 Identities=24% Similarity=0.333 Sum_probs=189.3
Q ss_pred cccCcCCeEEEEEEEE-cCCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.||+|+||.||++.. .+|+.||+|+++... ......+.+|++++..++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3689999999999995 468999999997532 223456788999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS-LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
+|.+++... ..+++..+..++.|++.||+||| + .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH----~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 151 (325)
T cd05594 81 ELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLH----SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 151 (325)
T ss_pred cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc
Confidence 999988654 34899999999999999999999 5 69999999999999999999999999998753221
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++|||||||++|||+||+.||.... .............
T Consensus 152 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~el~tG~~Pf~~~~------------~~~~~~~i~~~~~---- 213 (325)
T cd05594 152 TMKTFCGTPEYLAPEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------------HEKLFELILMEEI---- 213 (325)
T ss_pred ccccccCCcccCCHHHHc--cCCCCCccccccccceeeeeccCCCCCCCCC------------HHHHHHHHhcCCC----
Confidence 345789999999764 4578899999999999999999999996432 1122222111110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 636 (672)
..... ...++.+++.+||+.||++|+ ++.++++
T Consensus 214 -----~~p~~---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 214 -----RFPRT---LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred -----CCCCC---CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 00111 123567788899999999997 8998875
No 104
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.1e-36 Score=314.18 Aligned_cols=251 Identities=28% Similarity=0.404 Sum_probs=197.7
Q ss_pred HhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
+.+.||+|+||.||+|+.. ....+|+|.+..... ....++.+|+.+++.++||||+++++.+..++..++|+|
T Consensus 4 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (290)
T cd05045 4 LGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVE 83 (290)
T ss_pred ccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEE
Confidence 4578999999999999853 235789998875432 245678999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcCCC-------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEE
Q 005880 437 YMPNGSLFWLLHGNRG-------------------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVL 497 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~-------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIl 497 (672)
|+.+|+|.+++..... ....++++.+++.++.|++.||+||| +.+|+||||||+||+
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH----~~~ivH~dikp~nil 159 (290)
T cd05045 84 YAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA----EMKLVHRDLAARNVL 159 (290)
T ss_pred ecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH----HCCeehhhhhhheEE
Confidence 9999999999865321 12246899999999999999999999 789999999999999
Q ss_pred eCCCCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCC
Q 005880 498 LDKTGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGA 569 (672)
Q Consensus 498 l~~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~ 569 (672)
+++++.+||+|||+++..... ...++..|+|||.+. +..++.++||||||+++|||+| |+.||....
T Consensus 160 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~--~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--- 234 (290)
T cd05045 160 VAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA--- 234 (290)
T ss_pred EcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHc--cCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC---
Confidence 999999999999999754322 123356799999653 5678999999999999999999 999985321
Q ss_pred CCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 570 GMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
..++. .......... . ......++.+++.+||+.+|++||++.|+++.|+++..
T Consensus 235 ---------~~~~~-~~~~~~~~~~-------~---~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 235 ---------PERLF-NLLKTGYRME-------R---PENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred ---------HHHHH-HHHhCCCCCC-------C---CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 11222 2222111000 0 11223467888999999999999999999999999864
No 105
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=9.2e-37 Score=311.17 Aligned_cols=250 Identities=25% Similarity=0.341 Sum_probs=188.1
Q ss_pred ccCcCCeEEEEEEEEcC---CcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 367 MLGKGGFGTAYKAVLDD---GSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~~~~---g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.||+|+||.||+|...+ ...+|+|.+..... .....+.+|+++++.++|+||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999998543 35788998764432 235678899999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++...........++.....++.|++.||+||| +.+|+||||||+||++++++.+||+|||++......
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH----QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH----hcCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 999998655322334578889999999999999999 789999999999999999999999999998653221
Q ss_pred ---CCCCCCcccCCCccccC-----CCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 519 ---TVPRSNGYRAPELSSSD-----GRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~-----~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
...++..|+|||++... ...++.++|||||||++|||++ |+.||..... .+.......+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------------~~~~~~~~~~ 225 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD------------EQVLKQVVRE 225 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH------------HHHHHHHhhc
Confidence 22345679999976431 3466889999999999999999 7888853311 1111111121
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
.. ....++.. .......+.+++..|+ .||++|||++||++.|.
T Consensus 226 ~~-~~~~~~~~-----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 226 QD-IKLPKPQL-----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cC-ccCCCCcc-----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11 11111111 0112234566777888 59999999999999873
No 106
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.5e-36 Score=309.78 Aligned_cols=248 Identities=25% Similarity=0.398 Sum_probs=193.8
Q ss_pred cccCcCCeEEEEEEEEcC-Cc--EEEEEEcccCC-cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLDD-GS--VVAVKRLKDAS-IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~-g~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+..+ |. .+|+|.++... ....+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999999653 43 57889887533 33456889999999999 799999999999999999999999999
Q ss_pred CChhHHhhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEecc
Q 005880 441 GSLFWLLHGNRG-----------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDF 509 (672)
Q Consensus 441 g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 509 (672)
|+|.+++..... .....+++.++..++.|++.||+||| +.+++||||||+||++++++.+||+||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH----~~~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS----QKQFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccccceEEEcCCCeEEECCC
Confidence 999999975431 11235889999999999999999999 789999999999999999999999999
Q ss_pred CCCccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHH
Q 005880 510 GLSIFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQ 584 (672)
Q Consensus 510 G~a~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 584 (672)
|++...... ....+..|+|||++. ...++.++|||||||++|||++ |+.||.... ..+...
T Consensus 157 gl~~~~~~~~~~~~~~~~~~y~apE~~~--~~~~~~~~Di~slG~il~el~~~g~~pf~~~~------------~~~~~~ 222 (270)
T cd05047 157 GLSRGQEVYVKKTMGRLPVRWMAIESLN--YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT------------CAELYE 222 (270)
T ss_pred CCccccchhhhccCCCCccccCChHHHc--cCCCCchhhHHHHHHHHHHHHcCCCCCccccC------------HHHHHH
Confidence 998643221 122245699999653 4578899999999999999997 999985421 122222
Q ss_pred HHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 585 SVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
...... . .+ .. ......+.+++.+||+.+|.+|||+.|+++.|+++.
T Consensus 223 ~~~~~~-~---~~----~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 223 KLPQGY-R---LE----KP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HHhCCC-C---CC----CC---CcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 221110 0 00 00 112235778999999999999999999999999875
No 107
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.6e-36 Score=308.85 Aligned_cols=251 Identities=25% Similarity=0.408 Sum_probs=201.7
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+||+++++++...+..++||||+++
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADA 86 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCC
Confidence 467999999999999966 79999999886422 22356889999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++..... ....+++.+++.++.++++||+||| +.+|+||||||+||+++.++.++|+|||+++.....
T Consensus 87 ~~L~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 87 GDLSRMIKHFKK-QKRLIPERTIWKYFVQLCSALEHMH----SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred CCHHHHHHHhcc-cCCCcCHHHHHHHHHHHHHHHHHHH----hCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 999999875332 2345899999999999999999999 889999999999999999999999999998765432
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||.+. +..++.++|||||||++|||++|+.||.... .+..++........ ....
T Consensus 162 ~~~~~~~~~~y~apE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----------~~~~~~~~~~~~~~-~~~~ 228 (267)
T cd08224 162 AAHSLVGTPYYMSPERIH--ENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----------MNLYSLCKKIEKCD-YPPL 228 (267)
T ss_pred ccceecCCccccCHHHhc--cCCCCchhcHHHHHHHHHHHHHCCCCcccCC----------ccHHHHHhhhhcCC-CCCC
Confidence 235677899999664 5678899999999999999999999986432 22222222211111 0000
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
........+.+++.+||..+|++|||+.+|+++|+++.
T Consensus 229 ---------~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 229 ---------PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ---------ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 01123346788899999999999999999999999875
No 108
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3e-37 Score=322.81 Aligned_cols=232 Identities=25% Similarity=0.346 Sum_probs=186.2
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+.. +++.||||+++... ....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999965 58999999987532 22345677888888776 699999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 g~L~~~i~~~~-----~l~~~~~~~~~~ql~~~L~~lH----~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~ 151 (320)
T cd05590 81 GDLMFHIQKSR-----RFDEARARFYAAEITSALMFLH----DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK 151 (320)
T ss_pred chHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC
Confidence 99999887543 4899999999999999999999 88999999999999999999999999999875422
Q ss_pred --CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 518 --STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 518 --~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
....+|..|+|||++. +..++.++|||||||++|||++|+.||.... ..+....+.....
T Consensus 152 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~el~~g~~Pf~~~~------------~~~~~~~i~~~~~---- 213 (320)
T cd05590 152 TTSTFCGTPDYIAPEILQ--EMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN------------EDDLFEAILNDEV---- 213 (320)
T ss_pred cccccccCccccCHHHHc--CCCCCCccchhhhHHHHHHHhhCCCCCCCCC------------HHHHHHHHhcCCC----
Confidence 2445788999999764 5578899999999999999999999996432 2222332222211
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMS 632 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 632 (672)
. .... ....+.+++.+||+.||++||++.
T Consensus 214 ~-----~~~~---~~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 214 V-----YPTW---LSQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred C-----CCCC---CCHHHHHHHHHHcccCHHHCCCCC
Confidence 0 0011 123567888899999999999983
No 109
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.1e-36 Score=310.15 Aligned_cols=252 Identities=23% Similarity=0.370 Sum_probs=200.4
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
..+.||+|+||.||+|.. .+|..+|||.+..... ....++.+|+++++.++|+||+++++++..++..+++|||++
T Consensus 6 ~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~ 85 (267)
T cd08229 6 IEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELAD 85 (267)
T ss_pred hhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecC
Confidence 457799999999999995 5789999998864322 234678899999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+++|.+++..... ....+++..++.++.|+++||+||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 86 ~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 86 AGDLSRMIKHFKK-QKRLIPEKTVWKYFVQLCSALEHMH----SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred CCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 9999999874321 2346899999999999999999999 889999999999999999999999999998765432
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...++..|+|||.+. +..++.++||||||+++|||++|..||..... ....+........
T Consensus 161 ~~~~~~~~~~~~~ape~~~--~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----------~~~~~~~~~~~~~---- 224 (267)
T cd08229 161 TAAHSLVGTPYYMSPERIH--ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----------NLYSLCKKIEQCD---- 224 (267)
T ss_pred cccccccCCcCccCHHHhc--CCCccchhhHHHHHHHHHHHHhCCCCcccccc----------hHHHHhhhhhcCC----
Confidence 235677899999664 45688899999999999999999999864321 1112211111110
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
.+... .......+.+++.+||+.||++||||.+|+++++++.
T Consensus 225 --~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 225 --YPPLP----SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred --CCCCC----cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 00000 1123346788888999999999999999999999864
No 110
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.4e-37 Score=326.65 Aligned_cols=250 Identities=19% Similarity=0.292 Sum_probs=187.9
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
..+.||+|+||.||+|.. .+++.||+|... ...+.+|++++++++||||+++++++......++|+|++. ++
T Consensus 96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~ 168 (391)
T PHA03212 96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TD 168 (391)
T ss_pred EEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CC
Confidence 357899999999999995 468999999753 3456789999999999999999999999999999999994 78
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|..++... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 169 L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~ylH----~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~ 239 (391)
T PHA03212 169 LYCYLAAK-----RNIAICDILAIERSVLRAIQYLH----ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANK 239 (391)
T ss_pred HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccc
Confidence 98888643 34889999999999999999999 789999999999999999999999999999653221
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc-----
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW----- 591 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 591 (672)
...+|..|+|||++. +..++.++|||||||++|||+||+.||........ ..+....+..+.....
T Consensus 240 ~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~-----~~~~~~~l~~i~~~~g~~p~~ 312 (391)
T PHA03212 240 YYGWAGTIATNAPELLA--RDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDG-----DCDSDRQIKLIIRRSGTHPNE 312 (391)
T ss_pred cccccCccCCCChhhhc--CCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccc-----cCchhHHHHHHHHHhcCChhh
Confidence 346889999999764 45789999999999999999999988764322110 0000000111100000
Q ss_pred --------cccc---------cchhh-ccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 --------TAEV---------FDLEL-MRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 --------~~~~---------~d~~~-~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.... ..+.. ...........++.+++.+||+.||++|||+.|+++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 313 FPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred cCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000 00000 000111223456888999999999999999999984
No 111
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.4e-37 Score=325.71 Aligned_cols=240 Identities=22% Similarity=0.280 Sum_probs=192.2
Q ss_pred HHhcccCcCCeEEEEEEEEcC--CcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 363 ASAEMLGKGGFGTAYKAVLDD--GSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.+.||+|+||.||+|...+ +..||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++||||
T Consensus 33 ~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey 112 (340)
T PTZ00426 33 NFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEF 112 (340)
T ss_pred EEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeC
Confidence 345789999999999998543 3689999986432 22345788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 113 ~~~g~L~~~i~~~~-----~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 113 VIGGEFFTFLRRNK-----RFPNDVGCFYAAQIVLIFEYLQ----SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred CCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999997543 4899999999999999999999 88999999999999999999999999999987654
Q ss_pred C--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 518 S--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 518 ~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
. ...+|..|+|||++. +..++.++|||||||++|||++|+.||.... .......+.....
T Consensus 184 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~------------~~~~~~~i~~~~~---- 245 (340)
T PTZ00426 184 RTYTLCGTPEYIAPEILL--NVGHGKAADWWTLGIFIYEILVGCPPFYANE------------PLLIYQKILEGII---- 245 (340)
T ss_pred CcceecCChhhcCHHHHh--CCCCCccccccchhhHHHHHhcCCCCCCCCC------------HHHHHHHHhcCCC----
Confidence 3 456889999999764 4567899999999999999999999996432 1111222221110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVKL 637 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 637 (672)
....... ..+.+++.+|++.||++|+ +++|+++.
T Consensus 246 -----~~p~~~~---~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 -----YFPKFLD---NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -----CCCCCCC---HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 0011112 2456788899999999995 78888653
No 112
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.8e-37 Score=323.33 Aligned_cols=236 Identities=24% Similarity=0.355 Sum_probs=188.5
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+.. +++.||||+++... ....+.+..|.+++..+ +||||+++++++.+++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36899999999999965 57899999987532 22345677888888866 799999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|..++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 151 (321)
T cd05591 81 GDLMFQIQRSR-----KFDEPRSRFYAAEVTLALMFLH----RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV 151 (321)
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc
Confidence 99999887543 4889999999999999999999 889999999999999999999999999998754221
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||.... .......+......
T Consensus 152 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~il~el~tg~~Pf~~~~------------~~~~~~~i~~~~~~--- 214 (321)
T cd05591 152 TTTTFCGTPDYIAPEILQ--ELEYGPSVDWWALGVLMYEMMAGQPPFEADN------------EDDLFESILHDDVL--- 214 (321)
T ss_pred cccccccCccccCHHHHc--CCCCCCccceechhHHHHHHhcCCCCCCCCC------------HHHHHHHHHcCCCC---
Confidence 345788999999764 5578999999999999999999999996432 12222222222110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCC-------CHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-------NMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-------t~~evl~ 636 (672)
.... ...++.+++.+||+.||++|| ++.++++
T Consensus 215 ------~p~~---~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 215 ------YPVW---LSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred ------CCCC---CCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 0011 123567888899999999999 7777764
No 113
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1e-36 Score=312.88 Aligned_cols=247 Identities=26% Similarity=0.368 Sum_probs=196.5
Q ss_pred HhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
..+.||+|+||.||++... ++..+|+|.++.........+.+|+++++.++|+||+++++++.+....++||||
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (280)
T cd05092 9 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEY 88 (280)
T ss_pred eccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEec
Confidence 4578999999999999732 3568999998876666677899999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEe
Q 005880 438 MPNGSLFWLLHGNRG----------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVS 507 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~ 507 (672)
+++|+|.+++..... .....+++..++.++.|++.||+||| +.+++||||||+||++++++.+||+
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH----~~~i~H~dlkp~nil~~~~~~~kL~ 164 (280)
T cd05092 89 MRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA----SLHFVHRDLATRNCLVGQGLVVKIG 164 (280)
T ss_pred CCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH----HCCeecccccHhhEEEcCCCCEEEC
Confidence 999999999975431 11235899999999999999999999 8899999999999999999999999
Q ss_pred ccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCh
Q 005880 508 DFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDL 579 (672)
Q Consensus 508 DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~ 579 (672)
|||+++..... ...++..|+|||.+. +..++.++|||||||++|||++ |++||.....
T Consensus 165 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------------ 230 (280)
T cd05092 165 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL--YRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN------------ 230 (280)
T ss_pred CCCceeEcCCCceeecCCCccccccccCHHHhc--cCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH------------
Confidence 99998755322 122356799999654 5678999999999999999998 8999853221
Q ss_pred hHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 580 PRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 580 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
.+........... .........+.+++.+||+.||++||++.||++.|+
T Consensus 231 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 231 TEAIECITQGREL-----------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHHHHcCccC-----------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1112111111100 000112345778889999999999999999999886
No 114
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.5e-36 Score=309.42 Aligned_cols=245 Identities=24% Similarity=0.432 Sum_probs=196.2
Q ss_pred HhcccCcCCeEEEEEEEEc-CC---cEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DG---SVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
..+.||+|+||.||+|+.. ++ ..+|+|.++... ....+++.+|++++.+++|+||+++++++.+.+..++||||+
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (268)
T cd05063 9 KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYM 88 (268)
T ss_pred EeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcC
Confidence 3578999999999999964 33 379999987543 234567899999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++++|.+++.... ..+++.++..++.|++.||+||| +.+++||||||+||++++++.+||+|||++......
T Consensus 89 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 89 ENGALDKYLRDHD----GEFSSYQLVGMLRGIAAGMKYLS----DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred CCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 9999999997543 35899999999999999999999 789999999999999999999999999998765432
Q ss_pred C--------CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 519 T--------VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 ~--------~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
. ...+..|+|||++. ...++.++|||||||++|||++ |+.||.... ..++...+...
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~--~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~------------~~~~~~~i~~~ 226 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIA--YRKFTSASDVWSFGIVMWEVMSFGERPYWDMS------------NHEVMKAINDG 226 (268)
T ss_pred cccceeccCCCcCceecCHHHhh--cCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC------------HHHHHHHHhcC
Confidence 1 11234699999764 4578899999999999999998 999985421 12222222211
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
. ..+...+...++.+++.+||+.+|++||++.+|++.|+++
T Consensus 227 ~-----------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 227 F-----------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred C-----------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 0111122345678999999999999999999999999876
No 115
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.8e-36 Score=306.92 Aligned_cols=241 Identities=25% Similarity=0.350 Sum_probs=189.8
Q ss_pred ccCcCCeEEEEEEEEc---CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 367 MLGKGGFGTAYKAVLD---DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.||+|+||.||+|.+. ++..||+|++..... ...+.+.+|++++++++||||+++++++. .+..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999854 356799999875532 23467999999999999999999999875 457889999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCC---
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--- 519 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~--- 519 (672)
|.+++.... ..+++..+++++.|+++||+||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 81 L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 152 (257)
T cd05115 81 LNKFLSGKK----DEITVSNVVELMHQVSMGMKYLE----GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY 152 (257)
T ss_pred HHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH----hcCeeecccchheEEEcCCCcEEeccCCccccccCCccce
Confidence 999997543 35899999999999999999999 7899999999999999999999999999987543321
Q ss_pred -----CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 520 -----VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 520 -----~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
..++..|+|||.+. +..++.++|||||||++||+++ |+.||.... ..++.........
T Consensus 153 ~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------------~~~~~~~~~~~~~-- 216 (257)
T cd05115 153 KARSAGKWPLKWYAPECIN--FRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK------------GPEVMSFIEQGKR-- 216 (257)
T ss_pred eccCCCCCCcccCCHHHHc--cCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC------------HHHHHHHHHCCCC--
Confidence 11235799999654 4568899999999999999996 999986432 1122211111110
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
.+ .......++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 217 --~~-------~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 217 --LD-------CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred --CC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 00 0012234677889999999999999999999999875
No 116
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=6.9e-37 Score=314.03 Aligned_cols=242 Identities=23% Similarity=0.347 Sum_probs=188.7
Q ss_pred cCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 368 LGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 368 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
||+|+||+||++... +|+.||+|.+...... ..+.+..|++++++++|+||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999954 6899999998653322 235677899999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
..++..... ....+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||++......
T Consensus 81 ~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (280)
T cd05608 81 RYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLH----QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTK 155 (280)
T ss_pred HHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccc
Confidence 988754321 2346899999999999999999999 789999999999999999999999999999765432
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||....... ............
T Consensus 156 ~~~g~~~y~aPE~~~--~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~--------~~~~~~~~~~~~--------- 216 (280)
T cd05608 156 GYAGTPGFMAPELLQ--GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--------ENKELKQRILND--------- 216 (280)
T ss_pred ccCCCcCccCHHHhc--CCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch--------hHHHHHHhhccc---------
Confidence 345788999999764 5578899999999999999999999997532110 111111111110
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 636 (672)
.... .......+.+++.+||+.||++|| +++|+++
T Consensus 217 ~~~~---~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 217 SVTY---PDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCCC---cccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 0000 012234577888899999999999 5566654
No 117
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=6.4e-37 Score=313.72 Aligned_cols=244 Identities=23% Similarity=0.357 Sum_probs=190.3
Q ss_pred cCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 368 LGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 368 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
||+|+||.||++... +|+.||+|.+..... .....+..|++++++++||||+++++++.++...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999954 689999999864322 1234566799999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----C
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----T 519 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----~ 519 (672)
.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++...... .
T Consensus 81 ~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~ 153 (277)
T cd05607 81 KYHIYNVG---ERGLEMERVIHYSAQITCGILHLH----SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQ 153 (277)
T ss_pred HHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHH----HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeec
Confidence 98886443 245899999999999999999999 789999999999999999999999999998765433 3
Q ss_pred CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchh
Q 005880 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLE 599 (672)
Q Consensus 520 ~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (672)
..++..|+|||++. +..++.++||||+||++|||++|+.||...... ....+......... ...
T Consensus 154 ~~~~~~y~aPE~~~--~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~~-----~~~- 217 (277)
T cd05607 154 RAGTNGYMAPEILK--EEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK--------VAKEELKRRTLEDE-----VKF- 217 (277)
T ss_pred cCCCCCccCHHHHc--cCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch--------hhHHHHHHHhhccc-----ccc-
Confidence 45788999999764 446899999999999999999999999643211 11111111111111 000
Q ss_pred hccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 600 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
... ....++.+++.+||+.||++||++.|+++.+.
T Consensus 218 --~~~---~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 218 --EHQ---NFTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred --ccc---cCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 001 12335678888999999999999988764443
No 118
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-38 Score=326.72 Aligned_cols=241 Identities=27% Similarity=0.379 Sum_probs=201.5
Q ss_pred ccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChhH
Q 005880 367 MLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFW 445 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 445 (672)
+||+|.||+||-|+.. +...+|||.+........+-+..||.+-+.++|.|||+++|.+..+++.-+.||.++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 7999999999999955 467799999987766677788999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC-CCCcEEEeccCCCccCCC-----
Q 005880 446 LLHGNRGPGRTPL--DWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPP----- 517 (672)
Q Consensus 446 ~l~~~~~~~~~~l--~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~-~~~~~kl~DfG~a~~~~~----- 517 (672)
+|+...+ |+ ++.++--+..||++||.||| +..|||||||-+||||+ -.|.+||+|||-++.+..
T Consensus 662 LLrskWG----PlKDNEstm~fYtkQILeGLkYLH----en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~T 733 (1226)
T KOG4279|consen 662 LLRSKWG----PLKDNESTMNFYTKQILEGLKYLH----ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCT 733 (1226)
T ss_pred HHHhccC----CCccchhHHHHHHHHHHHHhhhhh----hcceeeccccCCcEEEeeccceEEecccccchhhccCCccc
Confidence 9987763 45 78888999999999999999 88999999999999997 478999999999876643
Q ss_pred CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 518 STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 518 ~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
.+..||..|||||++....+.|+.++|||||||.+.||.||++||...+... .++++-+..+ +
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq--------------AAMFkVGmyK--v- 796 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ--------------AAMFKVGMYK--V- 796 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh--------------Hhhhhhccee--c-
Confidence 2677899999999998888899999999999999999999999997543221 1122221111 0
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.++-.++...+...+|.+|+.+||.+||+++++++
T Consensus 797 ----HP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 797 ----HPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ----CCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 11122344456777888999999999999999975
No 119
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.4e-36 Score=309.86 Aligned_cols=246 Identities=24% Similarity=0.343 Sum_probs=191.6
Q ss_pred HhcccCcCCeEEEEEEEEc-CCc----EEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGS----VVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
..+.||+|+||.||+|.+. +|+ .|++|.+..... ....++..|+..+++++||||+++++++. ....++++||
T Consensus 11 ~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~ 89 (279)
T cd05111 11 KLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQL 89 (279)
T ss_pred eccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEe
Confidence 3578999999999999964 444 478888764332 23467888888999999999999999875 4557789999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++|+|.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||++++++.+||+|||+++....
T Consensus 90 ~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH----~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 90 SPLGSLLDHVRQHR----DSLDPQRLLNWCVQIAKGMYYLE----EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred CCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH----HCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 99999999997543 35899999999999999999999 78999999999999999999999999999976533
Q ss_pred C-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 518 S-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 518 ~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
. ...++..|+|||.+. +..++.++|||||||++|||++ |+.||..... . -.......
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~--~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~------------~-~~~~~~~~ 226 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESIL--FGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP------------H-EVPDLLEK 226 (279)
T ss_pred CCcccccCCCCCcccccCHHHhc--cCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH------------H-HHHHHHHC
Confidence 2 223456899999664 4578999999999999999998 9999864321 1 11111111
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
... ...+ ......+.+++.+||..||++|||+.|+++.|..+.+
T Consensus 227 ~~~--~~~~--------~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 227 GER--LAQP--------QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCc--CCCC--------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 110 0000 0122356778889999999999999999999998775
No 120
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.2e-36 Score=308.61 Aligned_cols=244 Identities=28% Similarity=0.455 Sum_probs=196.0
Q ss_pred HHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.++||+|+||.||+|..++++.||+|.+..... ...++.+|+.++++++|+||+++++++ ..+..++||||+++|+
T Consensus 9 ~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~~~ 86 (260)
T cd05067 9 KLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGS 86 (260)
T ss_pred eeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCCCCC
Confidence 34678999999999999988899999999875443 456889999999999999999999986 4567899999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ...+++.++..++.|++.||+||| +.+++||||||+||++++++.++|+|||++......
T Consensus 87 L~~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH----~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05067 87 LVDFLKTPE---GIKLTINKLIDMAAQIAEGMAFIE----RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred HHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHh----cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccc
Confidence 999987543 245899999999999999999999 889999999999999999999999999999765522
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++||||||+++|||++ |+.||.... ..+...... ......
T Consensus 160 ~~~~~~~~~y~~pe~~~--~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------------~~~~~~~~~-~~~~~~- 223 (260)
T cd05067 160 REGAKFPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT------------NPEVIQNLE-RGYRMP- 223 (260)
T ss_pred ccCCcccccccCHHHhc--cCCcCcccchHHHHHHHHHHHhCCCCCCCCCC------------hHHHHHHHH-cCCCCC-
Confidence 122346799999654 4568889999999999999999 999996432 112222111 110000
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
.. .....++.+++.+|++.+|++||+++++++.|+.
T Consensus 224 ------~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 224 ------RP---DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ------CC---CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 00 1122458889999999999999999999999875
No 121
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.3e-37 Score=322.39 Aligned_cols=236 Identities=26% Similarity=0.365 Sum_probs=185.7
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHH---cCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVL---GRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|... +|+.||||+++... ....+.+.+|++++ +.++||||+++++++...+..++||||
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~ 83 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEY 83 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcC
Confidence 468999999999999954 68999999997532 12234566666554 567899999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++|+|..+++.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~~~~L~~~~~~~------~l~~~~~~~~~~qi~~al~~lH----~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 84 AAGGDLMMHIHTD------VFSEPRAVFYAACVVLGLQYLH----ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred CCCCcHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHH----hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999888642 4899999999999999999999 88999999999999999999999999999865322
Q ss_pred -----CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 518 -----STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 518 -----~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
....++..|+|||++. +..++.++|||||||++|||++|+.||.... ..+....+.....
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~DiwslG~il~el~~G~~pf~~~~------------~~~~~~~i~~~~~- 218 (324)
T cd05589 154 FGDRTSTFCGTPEFLAPEVLT--ETSYTRAVDWWGLGVLIYEMLVGESPFPGDD------------EEEVFDSIVNDEV- 218 (324)
T ss_pred CCCcccccccCccccCHhHhc--CCCCCcccchhhHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHhCCC-
Confidence 1345788999999764 5678899999999999999999999996432 1222222222111
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPN-----MSHVVK 636 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~ 636 (672)
..... ....+.+++.+||+.||.+||+ +.++++
T Consensus 219 --------~~p~~---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 219 --------RYPRF---LSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred --------CCCCC---CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 00111 2235678888999999999994 555544
No 122
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.1e-36 Score=306.90 Aligned_cols=243 Identities=27% Similarity=0.418 Sum_probs=193.5
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
..+.||+|++|.||+|...++..+|+|.+..... ..+.+.+|++++++++|+|++++++++. .+..++||||+++|+|
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L 87 (260)
T cd05069 10 LDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSL 87 (260)
T ss_pred eeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCH
Confidence 3467999999999999988777899998875433 4567899999999999999999998875 5567899999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.++++... ...+++..+..++.|++.||+||| +.+++||||||+||++++++.++|+|||++......
T Consensus 88 ~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05069 88 LDFLKEGD---GKYLKLPQLVDMAAQIADGMAYIE----RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred HHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHH----hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccccc
Confidence 99997543 245899999999999999999999 789999999999999999999999999999765432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||... +..++.++||||||+++|||+| |+.||..... .+...... .....
T Consensus 161 ~~~~~~~~y~~Pe~~~--~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~------------~~~~~~~~-~~~~~--- 222 (260)
T cd05069 161 QGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN------------REVLEQVE-RGYRM--- 222 (260)
T ss_pred CCCccchhhCCHHHhc--cCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH------------HHHHHHHH-cCCCC---
Confidence 123456799999653 5678999999999999999999 8999864321 11111111 11000
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
.........+.+++.+||+.||++||++++|++.|++
T Consensus 223 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 -------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0111233467888889999999999999999999975
No 123
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.6e-37 Score=327.13 Aligned_cols=195 Identities=32% Similarity=0.449 Sum_probs=170.4
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCC-C-----CceeeeEEEEEcCCeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR-H-----PNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~~~~~~lv~e 436 (672)
+.+.||+|.||.|-+|.. ++++.||||++++... -..+-..|+.+|..|+ | -|+|++++||...++.|||+|
T Consensus 190 V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfE 268 (586)
T KOG0667|consen 190 VLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFE 268 (586)
T ss_pred EEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeeh
Confidence 357899999999999994 5699999999986543 4566678999999986 4 489999999999999999999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC--CcEEEeccCCCcc
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT--GNARVSDFGLSIF 514 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~--~~~kl~DfG~a~~ 514 (672)
.+ .-+|+++++.+.. ..++...+..|+.||+.||.+|| +.+|||+||||+|||+.+- ..+||+|||.+..
T Consensus 269 LL-~~NLYellK~n~f---~Glsl~~ir~~~~Qil~~L~~L~----~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 269 LL-STNLYELLKNNKF---RGLSLPLVRKFAQQILTALLFLH----ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred hh-hhhHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCChhheeeccCCcCceeEEecccccc
Confidence 99 5599999998875 45999999999999999999999 8999999999999999753 4699999999988
Q ss_pred CCCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCC
Q 005880 515 APPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGA 569 (672)
Q Consensus 515 ~~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~ 569 (672)
.... .+..+..|+|||++. |..|+++.||||||||+.||++|.+-|.++.+.+
T Consensus 341 ~~q~vytYiQSRfYRAPEVIL--GlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~D 395 (586)
T KOG0667|consen 341 ESQRVYTYIQSRFYRAPEVIL--GLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYD 395 (586)
T ss_pred cCCcceeeeeccccccchhhc--cCCCCCccceeehhhhHHhHhcCccccCCCCHHH
Confidence 7665 566788999999886 6799999999999999999999988887766544
No 124
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=8.5e-37 Score=315.51 Aligned_cols=251 Identities=27% Similarity=0.392 Sum_probs=197.4
Q ss_pred HHhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCC-cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEE
Q 005880 363 ASAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLV 434 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 434 (672)
...+.||+|+||.||++... +...+|+|.++... .....++.+|++++.++ +|+||+++++++..++..++|
T Consensus 15 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li 94 (293)
T cd05053 15 TLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVV 94 (293)
T ss_pred EEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEE
Confidence 34578999999999999854 23689999987532 23446788999999999 899999999999999999999
Q ss_pred EeecCCCChhHHhhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc
Q 005880 435 SEYMPNGSLFWLLHGNRG-----------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN 503 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~ 503 (672)
|||+++|+|.++++.... .....+++..+++++.|++.||+||| +.+|+||||||+||++++++.
T Consensus 95 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH----~~~ivH~dlkp~Nil~~~~~~ 170 (293)
T cd05053 95 VEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA----SKKCIHRDLAARNVLVTEDHV 170 (293)
T ss_pred EEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH----HCCccccccceeeEEEcCCCe
Confidence 999999999999975321 12346899999999999999999999 789999999999999999999
Q ss_pred EEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCC
Q 005880 504 ARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGG 575 (672)
Q Consensus 504 ~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~ 575 (672)
+||+|||+++..... ...++..|+|||++. +..++.++|||||||++|||++ |..||....
T Consensus 171 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------- 239 (293)
T cd05053 171 MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALF--DRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP--------- 239 (293)
T ss_pred EEeCccccccccccccceeccCCCCCCccccCHHHhc--cCCcCcccceeehhhHHHHHhcCCCCCCCCCC---------
Confidence 999999999765432 112345799999653 5678899999999999999998 898885321
Q ss_pred CCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 576 AVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
..+..... ...... .........+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 240 ---~~~~~~~~-~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 240 ---VEELFKLL-KEGYRM----------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ---HHHHHHHH-HcCCcC----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11212111 111100 001122346788999999999999999999999999875
No 125
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.3e-36 Score=307.72 Aligned_cols=244 Identities=29% Similarity=0.421 Sum_probs=194.6
Q ss_pred HHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEc-CCeEEEEEeecCCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA-REEKLLVSEYMPNG 441 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~~~g 441 (672)
.+.+.||+|+||.||++... |..||+|.++... ..+.+.+|+.++++++|+|++++++++.. ++..++|+||+++|
T Consensus 9 ~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~ 85 (256)
T cd05082 9 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 85 (256)
T ss_pred eeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCC
Confidence 34578999999999999876 7889999987543 35678999999999999999999998654 45789999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--C
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--T 519 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--~ 519 (672)
+|.+++.... ...+++..++.++.|++.||+||| +.+++||||||+||++++++.+||+|||+++..... .
T Consensus 86 ~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~ 158 (256)
T cd05082 86 SLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLE----ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 158 (256)
T ss_pred cHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH----hCCEeccccchheEEEcCCCcEEecCCccceeccccCCC
Confidence 9999997543 245899999999999999999999 789999999999999999999999999998765432 2
Q ss_pred CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 520 ~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...+..|+|||++. +..++.++|||||||++|||++ |+.||... ...+........ .....
T Consensus 159 ~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~------------~~~~~~~~~~~~-~~~~~--- 220 (256)
T cd05082 159 GKLPVKWTAPEALR--EKKFSTKSDVWSFGILLWEIYSFGRVPYPRI------------PLKDVVPRVEKG-YKMDA--- 220 (256)
T ss_pred CccceeecCHHHHc--cCCCCchhhhHHHHHHHHHHHhCCCCCCCCC------------CHHHHHHHHhcC-CCCCC---
Confidence 33456799999664 4578899999999999999998 99998532 222222222111 11110
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
.......+.+++.+|++.+|++|||+.++++.|+++
T Consensus 221 -------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 221 -------PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 012234677888999999999999999999998864
No 126
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-36 Score=315.92 Aligned_cols=254 Identities=26% Similarity=0.355 Sum_probs=199.0
Q ss_pred HHHhcccCcCCeEEEEEEEEc--------CCcEEEEEEcccCC-cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeE
Q 005880 362 RASAEMLGKGGFGTAYKAVLD--------DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEK 431 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 431 (672)
+.+.+.||+|+||.||++... ++..+|+|.++... .....++.+|++++.++ +||||+++++++...+..
T Consensus 20 ~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 99 (307)
T cd05098 20 LVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL 99 (307)
T ss_pred eEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence 455688999999999999842 23579999997542 23456788899999999 799999999999999999
Q ss_pred EEEEeecCCCChhHHhhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC
Q 005880 432 LLVSEYMPNGSLFWLLHGNRGP-----------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK 500 (672)
Q Consensus 432 ~lv~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~ 500 (672)
++||||+++|+|.+++...... ....+++.++++++.|++.||+||| +.+++||||||+||++++
T Consensus 100 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH----~~gi~H~dlkp~Nill~~ 175 (307)
T cd05098 100 YVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA----SKKCIHRDLAARNVLVTE 175 (307)
T ss_pred EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH----HCCcccccccHHheEEcC
Confidence 9999999999999999764321 1235899999999999999999999 789999999999999999
Q ss_pred CCcEEEeccCCCccCCCC-----C--CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 005880 501 TGNARVSDFGLSIFAPPS-----T--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMG 572 (672)
Q Consensus 501 ~~~~kl~DfG~a~~~~~~-----~--~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~ 572 (672)
++.+||+|||.++..... . ...+..|+|||.+. +..++.++|||||||++|||++ |+.||...
T Consensus 176 ~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwslG~~l~el~~~g~~p~~~~------- 246 (307)
T cd05098 176 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV------- 246 (307)
T ss_pred CCcEEECCCcccccccccchhhccccCCCccceeChHHhc--cCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-------
Confidence 999999999998765432 1 12235799999664 4578899999999999999998 88888532
Q ss_pred CCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 573 CGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
...+..... ...... ........++.+++.+||..+|++|||+.||++.|+++...
T Consensus 247 -----~~~~~~~~~-~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 247 -----PVEELFKLL-KEGHRM----------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred -----CHHHHHHHH-HcCCCC----------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 222222221 111110 00112234677889999999999999999999999998754
No 127
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.5e-36 Score=314.26 Aligned_cols=255 Identities=24% Similarity=0.371 Sum_probs=197.4
Q ss_pred HhcccCcCCeEEEEEEEEcC-Cc--EEEEEEcccCC-cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVLDD-GS--VVAVKRLKDAS-IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~-g~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
+.+.||+|+||.||+|...+ +. .+++|.++... ....+.+.+|++++.++ +||||+++++++...+..++|+||+
T Consensus 6 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 85 (297)
T cd05089 6 FEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYA 85 (297)
T ss_pred eeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEec
Confidence 34679999999999999653 43 47888887432 23456789999999999 7999999999999999999999999
Q ss_pred CCCChhHHhhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEe
Q 005880 439 PNGSLFWLLHGNRGP-----------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVS 507 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~ 507 (672)
++|+|.++++..... ....+++..++.++.|++.||+||| +.+|+||||||+||++++++.+||+
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH----~~~ivH~dlkp~Nill~~~~~~kl~ 161 (297)
T cd05089 86 PYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS----EKQFIHRDLAARNVLVGENLASKIA 161 (297)
T ss_pred CCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCcCCcceEEECCCCeEEEC
Confidence 999999999754310 1135889999999999999999999 7899999999999999999999999
Q ss_pred ccCCCccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHH
Q 005880 508 DFGLSIFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRW 582 (672)
Q Consensus 508 DfG~a~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~ 582 (672)
|||++...... ....+..|+|||++. +..++.++|||||||++|||++ |+.||.... ..+.
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~------------~~~~ 227 (297)
T cd05089 162 DFGLSRGEEVYVKKTMGRLPVRWMAIESLN--YSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT------------CAEL 227 (297)
T ss_pred CcCCCccccceeccCCCCcCccccCchhhc--cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC------------HHHH
Confidence 99998643321 112245699999654 5578899999999999999997 999996432 2222
Q ss_pred HHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 005880 583 VQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVS 647 (672)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 647 (672)
........ . .. .. ......+.+++.+||+.+|.+||++.++++.|+.+.+....
T Consensus 228 ~~~~~~~~-~-----~~--~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 228 YEKLPQGY-R-----ME--KP---RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred HHHHhcCC-C-----CC--CC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 22221110 0 00 00 11224577888999999999999999999999998764433
No 128
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.1e-36 Score=306.17 Aligned_cols=244 Identities=31% Similarity=0.446 Sum_probs=198.1
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
+.+.||+|+||.||+|... |+.||+|.++.... ..+++.+|+.++++++|+||+++++++.+.+..++||||+++++|
T Consensus 10 ~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L 87 (256)
T cd05039 10 LGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSL 87 (256)
T ss_pred ceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcH
Confidence 4578999999999999876 78999999986544 567899999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCC--CC
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VP 521 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~ 521 (672)
.+++.... ...+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||.++...... ..
T Consensus 88 ~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lh----~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~ 160 (256)
T cd05039 88 VDYLRSRG---RAVITLAQQLGFALDVCEGMEYLE----EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGK 160 (256)
T ss_pred HHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH----hCCccchhcccceEEEeCCCCEEEcccccccccccccccCC
Confidence 99997543 235899999999999999999999 8899999999999999999999999999998764432 22
Q ss_pred CCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhh
Q 005880 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLEL 600 (672)
Q Consensus 522 ~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (672)
.+..|+|||.+. +..++.++||||||+++|||++ |+.||.... ..+ +...........
T Consensus 161 ~~~~~~ape~~~--~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------------~~~-~~~~~~~~~~~~------ 219 (256)
T cd05039 161 LPVKWTAPEALR--EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP------------LKD-VVPHVEKGYRME------ 219 (256)
T ss_pred CcccccCchhhc--CCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC------------HHH-HHHHHhcCCCCC------
Confidence 345799999654 4578889999999999999997 999985321 111 111111111100
Q ss_pred ccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 601 MRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 601 ~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
........+.+++.+||+.+|++|||+.|++++|+.+
T Consensus 220 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 220 ----APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ----CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0112234678899999999999999999999999753
No 129
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.4e-36 Score=311.67 Aligned_cols=251 Identities=25% Similarity=0.316 Sum_probs=199.0
Q ss_pred HhcccCcCCeEEEEEEEEcC-----CcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEc-CCeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVLDD-----GSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFA-REEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 436 (672)
+.+.||+|+||.||+|...+ +..|++|++.... ....+.+.+|+.++++++|+||+++++++.. +...++++|
T Consensus 10 ~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 89 (280)
T cd05043 10 LSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYP 89 (280)
T ss_pred EeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEE
Confidence 35789999999999999765 6889999987543 3345678899999999999999999998876 467889999
Q ss_pred ecCCCChhHHhhcCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 437 YMPNGSLFWLLHGNRGP---GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
|+++|+|.+++...... ....+++.+++.++.|++.||+||| +.+++||||||+||++++++.+||+|||+++
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH----~~~i~H~di~p~nil~~~~~~~kl~d~g~~~ 165 (280)
T cd05043 90 YMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH----KRGVIHKDIAARNCVIDEELQVKITDNALSR 165 (280)
T ss_pred cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccCHhhEEEcCCCcEEECCCCCcc
Confidence 99999999999754321 1246899999999999999999999 7899999999999999999999999999998
Q ss_pred cCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 005880 514 FAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQS 585 (672)
Q Consensus 514 ~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 585 (672)
..... ...++..|+|||++. +..++.++|||||||++||+++ |+.||.... ..++...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~y~apE~~~--~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------------~~~~~~~ 231 (280)
T cd05043 166 DLFPMDYHCLGDNENRPVKWMALESLV--NKEYSSASDVWSFGVLLWELMTLGQTPYVEID------------PFEMAAY 231 (280)
T ss_pred cccCCceEEeCCCCCcchhccCHHHHh--cCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC------------HHHHHHH
Confidence 65332 233456799999664 4578999999999999999999 999996432 1122221
Q ss_pred HHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
....... .........+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 232 ~~~~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 232 LKDGYRL-----------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred HHcCCCC-----------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111100 0011123457889999999999999999999999998864
No 130
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.6e-36 Score=307.28 Aligned_cols=239 Identities=25% Similarity=0.379 Sum_probs=188.9
Q ss_pred cccCcCCeEEEEEEEEcC-C----------cEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEE
Q 005880 366 EMLGKGGFGTAYKAVLDD-G----------SVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLV 434 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~-g----------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 434 (672)
+.||+|+||.||+|...+ + ..|++|.+...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 468999999999999764 3 25788887654432 6788999999999999999999999988 778999
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC-------cEEEe
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG-------NARVS 507 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~-------~~kl~ 507 (672)
|||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+
T Consensus 79 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 79 EEYVKFGPLDVFLHREK----NNVSLHWKLDVAKQLASALHYLE----DKKLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred EEcCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHh----hCCeecccCccceEEEecCccccCCceeEEeC
Confidence 99999999999997643 25899999999999999999999 88999999999999999887 79999
Q ss_pred ccCCCccCCCC-CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 005880 508 DFGLSIFAPPS-TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQS 585 (672)
Q Consensus 508 DfG~a~~~~~~-~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 585 (672)
|||++...... ...++..|+|||++......++.++|||||||++|||++ |..||..... ..+...
T Consensus 151 Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~------------~~~~~~ 218 (259)
T cd05037 151 DPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS------------SEKERF 218 (259)
T ss_pred CCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc------------hhHHHH
Confidence 99999765443 344567899999775433478999999999999999999 5777753321 111111
Q ss_pred HHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
..... ....+ ....+.+++.+||..+|.+|||+.||++.|+
T Consensus 219 ~~~~~---------~~~~~----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 219 YQDQH---------RLPMP----DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HhcCC---------CCCCC----CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11000 00001 1146788999999999999999999998763
No 131
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4e-36 Score=308.70 Aligned_cols=246 Identities=21% Similarity=0.331 Sum_probs=195.3
Q ss_pred HHHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 362 RASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.+.+.||+|+||.||+|... ++..+++|.+........+.+.+|+++++.++||||+++++++..++..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 345678999999999999965 5788999998765555567889999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|..++.... .++++..+..++.|+++||+||| +.+++||||||+||+++.++++||+|||++......
T Consensus 87 ~~l~~~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH----~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~ 158 (282)
T cd06643 87 GAVDAVMLELE----RPLTEPQIRVVCKQTLEALNYLH----ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 158 (282)
T ss_pred CcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCcccEEEccCCCEEEcccccccccccccc
Confidence 99999886532 45899999999999999999999 789999999999999999999999999998654322
Q ss_pred ---CCCCCCcccCCCcccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 519 ---TVPRSNGYRAPELSSS---DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~---~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
...++..|+|||++.. .+..++.++|||||||++|||++|+.||.... ..+.+.........
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~------------~~~~~~~~~~~~~~ 226 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN------------PMRVLLKIAKSEPP 226 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC------------HHHHHHHHhhcCCC
Confidence 3456788999998642 24557789999999999999999999986421 11111111111100
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... ......+.+++.+||+.||.+||++.++++
T Consensus 227 ------~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 227 ------TLAQP---SRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ------CCCCc---cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00001 112245778888999999999999998863
No 132
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2e-36 Score=306.49 Aligned_cols=240 Identities=27% Similarity=0.315 Sum_probs=190.1
Q ss_pred ccCcCCeEEEEEEEEc---CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 367 MLGKGGFGTAYKAVLD---DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.||+|+||.||+|.++ ++..+|+|+++.... ...+++.+|+.+++.++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999753 578999999874432 24567899999999999999999999875 45678999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST-- 519 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~-- 519 (672)
+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++......
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH----~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~ 151 (257)
T cd05116 81 PLNKFLQKN-----KHVTEKNITELVHQVSMGMKYLE----ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY 151 (257)
T ss_pred cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe
Confidence 999999643 34899999999999999999999 7899999999999999999999999999997654321
Q ss_pred ------CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 520 ------VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 520 ------~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
..++..|+|||.+. ...++.++|||||||++|||++ |+.||.... ..++...+. ....
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------------~~~~~~~i~-~~~~ 216 (257)
T cd05116 152 YKAKTHGKWPVKWYAPECMN--YYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK------------GNEVTQMIE-SGER 216 (257)
T ss_pred eeecCCCCCCccccCHhHhc--cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC------------HHHHHHHHH-CCCC
Confidence 11245799999653 4578889999999999999998 999996432 112222222 1111
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
... . .....++.+++.+||+.||++||++.+|.+.|++.
T Consensus 217 ~~~-------~---~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 217 MEC-------P---QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCC-------C---CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 110 0 11234577888999999999999999999999863
No 133
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=6.5e-37 Score=319.69 Aligned_cols=235 Identities=27% Similarity=0.364 Sum_probs=184.3
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcC-CCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGR-LRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+.. +++.||||+++... ....+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999965 58899999987532 1233455667777664 4899999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH----~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~ 151 (316)
T cd05592 81 GDLMFHIQSS-----GRFDEARARFYAAEIICGLQFLH----KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG 151 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC
Confidence 9999998754 24889999999999999999999 78999999999999999999999999999975432
Q ss_pred --CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 518 --STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 518 --~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
....+|..|+|||++. +..++.++|||||||++|||++|+.||.... ..+....+.....
T Consensus 152 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~il~ell~G~~Pf~~~~------------~~~~~~~i~~~~~---- 213 (316)
T cd05592 152 KASTFCGTPDYIAPEILK--GQKYNESVDWWSFGVLLYEMLIGQSPFHGED------------EDELFDSILNDRP---- 213 (316)
T ss_pred ccccccCCccccCHHHHc--CCCCCCcccchhHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHcCCC----
Confidence 2345789999999764 5578999999999999999999999996432 1222222221110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHH-HHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMS-HVV 635 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~-evl 635 (672)
. .... ....+.+++.+||+.||.+||++. +++
T Consensus 214 ---~--~~~~---~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 214 ---H--FPRW---ISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred ---C--CCCC---CCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0 0011 123466788899999999999875 443
No 134
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.1e-37 Score=325.98 Aligned_cols=233 Identities=25% Similarity=0.365 Sum_probs=187.6
Q ss_pred cccCcCCeEEEEEEEE----cCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
+.||+|+||.||+++. .+|+.||+|+++.... .....+.+|++++++++||||+++++++.+++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5699999999999884 3589999999975332 234567789999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 82 ~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 152 (318)
T cd05582 82 GGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLH----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 152 (318)
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC
Confidence 99999998643 35899999999999999999999 789999999999999999999999999998765332
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||.... ..+..........
T Consensus 153 ~~~~~~~g~~~y~aPE~~~--~~~~~~~~DiwslG~il~el~tg~~p~~~~~------------~~~~~~~i~~~~~--- 215 (318)
T cd05582 153 KKAYSFCGTVEYMAPEVVN--RRGHTQSADWWSFGVLMFEMLTGSLPFQGKD------------RKETMTMILKAKL--- 215 (318)
T ss_pred CceecccCChhhcCHHHHc--CCCCCCccceeccceEeeeeccCCCCCCCCC------------HHHHHHHHHcCCC---
Confidence 345788999999764 4567899999999999999999999996431 1222222222110
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSH 633 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e 633 (672)
.... .....+.+++.+||+.||++||++.+
T Consensus 216 ------~~p~---~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 ------GMPQ---FLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred ------CCCC---CCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 0011 11234677888999999999999655
No 135
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=5.5e-37 Score=322.02 Aligned_cols=240 Identities=22% Similarity=0.345 Sum_probs=186.6
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+.. +++.||+|+++... ......+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36899999999999955 68899999997532 22345677888888776 899999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|..++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~ 151 (329)
T cd05618 81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 151 (329)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC
Confidence 9999888654 34899999999999999999999 78999999999999999999999999999875322
Q ss_pred --CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 518 --STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 518 --~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
....+|..|+|||++. +..++.++|||||||++|||++|+.||........ .......++.........
T Consensus 152 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~----~~~~~~~~~~~~i~~~~~--- 222 (329)
T cd05618 152 TTSTFCGTPNYIAPEILR--GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN----PDQNTEDYLFQVILEKQI--- 222 (329)
T ss_pred ccccccCCccccCHHHHc--CCCCCCccceecccHHHHHHhhCCCCCccCCCcCC----cccccHHHHHHHHhcCCC---
Confidence 2345788999999764 56788999999999999999999999964321110 011122232222222110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM 631 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 631 (672)
.... .....+.+++.+||+.||++||++
T Consensus 223 -----~~p~---~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 223 -----RIPR---SLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred -----CCCC---CCCHHHHHHHHHHhcCCHHHcCCC
Confidence 0011 122356788889999999999984
No 136
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2e-36 Score=309.20 Aligned_cols=249 Identities=24% Similarity=0.345 Sum_probs=195.2
Q ss_pred HhcccCcCCeEEEEEEEEcC----CcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCe------E
Q 005880 364 SAEMLGKGGFGTAYKAVLDD----GSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREE------K 431 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~ 431 (672)
+.+.||+|+||.||+|.... +..||+|+++.... .....+.+|++.++.++||||+++++++...+. .
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05035 3 LGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKP 82 (273)
T ss_pred cccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCccc
Confidence 35789999999999999642 36799999875332 234678999999999999999999999876554 6
Q ss_pred EEEEeecCCCChhHHhhcCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 432 LLVSEYMPNGSLFWLLHGNRG-PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 432 ~lv~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
++|+||+++|+|..++..... .....+++..+..++.|++.||+||| +.+++||||||+||++++++.+||+|||
T Consensus 83 ~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~dfg 158 (273)
T cd05035 83 MVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS----NRNFIHRDLAARNCMLREDMTVCVADFG 158 (273)
T ss_pred EEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH----hCCeeccccchheEEECCCCeEEECCcc
Confidence 899999999999999865432 12346899999999999999999999 7899999999999999999999999999
Q ss_pred CCccCCCCC-------CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHH
Q 005880 511 LSIFAPPST-------VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRW 582 (672)
Q Consensus 511 ~a~~~~~~~-------~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~ 582 (672)
+++...... ...+..|+|||.+ .+..++.++|||||||++|||++ |..||.... ..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~--~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~------------~~~~ 224 (273)
T cd05035 159 LSKKIYSGDYYRQGRIAKMPVKWIAIESL--ADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE------------NHEI 224 (273)
T ss_pred ceeeccccccccccccccCCccccCHhhc--ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC------------HHHH
Confidence 997654321 2234579999965 35678899999999999999999 888885422 1122
Q ss_pred HHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 583 VQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
.......... . ........+.+++.+||+.||.+|||+.|+++.|+++
T Consensus 225 ~~~~~~~~~~-~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 225 YDYLRHGNRL-K----------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHHHHcCCCC-C----------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2222211100 0 0112334688889999999999999999999999875
No 137
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.3e-36 Score=317.13 Aligned_cols=263 Identities=25% Similarity=0.339 Sum_probs=204.8
Q ss_pred ccCHHHHHHHHhcccCcCCeEEEEEEEEc--------CCcEEEEEEcccCC-cchHHHHHHHHHHHcCC-CCCceeeeEE
Q 005880 354 RFELEDLLRASAEMLGKGGFGTAYKAVLD--------DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRL-RHPNLVGLKA 423 (672)
Q Consensus 354 ~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~ 423 (672)
++++....+.+.+.||+|+||.||+|+.. .+..||+|.++... ....+++.+|++++.++ +||||+++++
T Consensus 6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (334)
T cd05100 6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLG 85 (334)
T ss_pred ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence 45555555566789999999999999742 12368999887533 22456889999999999 7999999999
Q ss_pred EEEcCCeEEEEEeecCCCChhHHhhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCC
Q 005880 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRG-----------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIK 492 (672)
Q Consensus 424 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlk 492 (672)
++..++..++++||+++|+|.+++..... .....+++.++..++.|+++||+||| +.+|+|||||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH----~~givH~dlk 161 (334)
T cd05100 86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA----SQKCIHRDLA 161 (334)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH----HCCeeccccc
Confidence 99999999999999999999999975431 11245899999999999999999999 7899999999
Q ss_pred CCCEEeCCCCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 005880 493 STNVLLDKTGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVI 564 (672)
Q Consensus 493 p~NIll~~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~ 564 (672)
|+||++++++.+||+|||+++..... ...++..|+|||++. +..++.++|||||||++|||++ |..||..
T Consensus 162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~el~~~g~~p~~~ 239 (334)
T cd05100 162 ARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALF--DRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 239 (334)
T ss_pred cceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhc--cCCcCchhhhHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999765432 112235699999764 4578899999999999999998 8888853
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 565 DGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
. +..++......... ... .......+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 240 ~------------~~~~~~~~~~~~~~-~~~----------~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 240 I------------PVEELFKLLKEGHR-MDK----------PANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred C------------CHHHHHHHHHcCCC-CCC----------CCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 2 22333332222110 000 012234678899999999999999999999999999854
Q ss_pred C
Q 005880 645 E 645 (672)
Q Consensus 645 ~ 645 (672)
.
T Consensus 297 ~ 297 (334)
T cd05100 297 T 297 (334)
T ss_pred c
Confidence 4
No 138
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.1e-36 Score=305.89 Aligned_cols=245 Identities=26% Similarity=0.369 Sum_probs=189.4
Q ss_pred cccCcCCeEEEEEEEEc----CCcEEEEEEcccC-CcchHHHHHHHHHHHcCCCCCceeeeEEEEEc-CCeEEEEEeecC
Q 005880 366 EMLGKGGFGTAYKAVLD----DGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA-REEKLLVSEYMP 439 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~~ 439 (672)
+.||+|+||.||+|... ++..||+|++... .....+.+.+|+.+++.++||||+++++++.. +...++|+||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 2457999998643 23345688899999999999999999998764 556789999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|.+++.... ...++..+..++.|+++||+||| +.+++||||||+||++++++.+||+|||+++.....
T Consensus 81 ~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~ 152 (262)
T cd05058 81 HGDLRNFIRSET----HNPTVKDLIGFGLQVAKGMEYLA----SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKE 152 (262)
T ss_pred CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----hCCccccccCcceEEEcCCCcEEECCccccccccCCc
Confidence 999999997543 23678888999999999999999 789999999999999999999999999998754321
Q ss_pred --------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 519 --------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTG-KCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 --------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
...++..|+|||.+. +..++.++|||||||++|||++| .+||... +..+........
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~el~~~~~~~~~~~------------~~~~~~~~~~~~ 218 (262)
T cd05058 153 YYSVHNHTGAKLPVKWMALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDV------------DSFDITVYLLQG 218 (262)
T ss_pred ceeecccccCcCCccccChhHhc--cCccchHHHHHHHHHHHHHHHcCCCCCCCCC------------CHHHHHHHHhcC
Confidence 223356799999654 45788999999999999999995 5555322 112222222111
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
... ... ......+.+++.+||+.+|++||++.||++.|+++..
T Consensus 219 ~~~--------~~~---~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 219 RRL--------LQP---EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCC--------CCC---CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 100 000 1122457889999999999999999999999998753
No 139
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.7e-36 Score=305.54 Aligned_cols=242 Identities=30% Similarity=0.392 Sum_probs=192.0
Q ss_pred cccCcCCeEEEEEEEEcC----CcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLDD----GSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
++||+|+||.||+|++.. +..||+|.+..... ...+++.+|++++++++|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 469999999999998532 26899999875543 34568899999999999999999999876 4567999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCC-
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST- 519 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~- 519 (672)
|+|.+++.... .+++..+..++.|++.||+||| ..+++||||||+||+++.++.+||+|||+++......
T Consensus 80 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lh----~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~ 150 (257)
T cd05060 80 GPLLKYLKKRR-----EIPVSDLKELAHQVAMGMAYLE----SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD 150 (257)
T ss_pred CcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHh----hcCeeccCcccceEEEcCCCcEEeccccccceeecCCc
Confidence 99999997543 5899999999999999999999 7899999999999999999999999999987654331
Q ss_pred -------CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 520 -------VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 520 -------~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
..++..|+|||.+. +..++.++|||||||++|||++ |+.||.... ..+..........
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~------------~~~~~~~~~~~~~ 216 (257)
T cd05060 151 YYRATTAGRWPLKWYAPECIN--YGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK------------GAEVIAMLESGER 216 (257)
T ss_pred ccccccCccccccccCHHHhc--CCCCCccchHHHHHHHHHHHHcCCCCCcccCC------------HHHHHHHHHcCCc
Confidence 11134699999653 5678999999999999999998 999986432 1122222111110
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
. .........+.+++.+||..+|++||++.++++.|+++.
T Consensus 217 -~----------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 217 -L----------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred -C----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 0 001122346788999999999999999999999999764
No 140
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.2e-37 Score=321.68 Aligned_cols=244 Identities=22% Similarity=0.346 Sum_probs=190.0
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+.. +++.||||+++.... .....+.+|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36899999999999954 689999999975322 2345678899999888 799999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 g~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~ 151 (329)
T cd05588 81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNFLH----ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD 151 (329)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC
Confidence 9999888644 34899999999999999999999 88999999999999999999999999999874321
Q ss_pred --CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 518 --STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 518 --~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
....+|..|+|||++. +..++.++|||||||++|||++|+.||......+. ......++......+...
T Consensus 152 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~~~--- 222 (329)
T cd05588 152 TTSTFCGTPNYIAPEILR--GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDN----PDQNTEDYLFQVILEKQI--- 222 (329)
T ss_pred ccccccCCccccCHHHHc--CCCCCCccceechHHHHHHHHHCCCCccccccccc----ccccchHHHHHHHHcCCC---
Confidence 2456788999999764 46788999999999999999999999964321110 011122233222222111
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCC------HHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPN------MSHVV 635 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt------~~evl 635 (672)
..... ....+.+++.+||+.||.+||+ +.+++
T Consensus 223 -----~~p~~---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 223 -----RIPRS---LSVKASSVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred -----CCCCC---CCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 00111 1235678888999999999998 55665
No 141
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.2e-36 Score=316.21 Aligned_cols=194 Identities=22% Similarity=0.391 Sum_probs=159.3
Q ss_pred hcccCcCCeEEEEEEEEc---CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEc--CCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD---DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA--REEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 439 (672)
..+||+|+||.||+|+.. +++.||+|.++... ....+.+|++++++++||||+++++++.. +...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 467999999999999954 46889999987543 23567889999999999999999998864 456789999995
Q ss_pred CCChhHHhhcCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe----CCCCcEEEeccCC
Q 005880 440 NGSLFWLLHGNRG----PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL----DKTGNARVSDFGL 511 (672)
Q Consensus 440 ~g~L~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll----~~~~~~kl~DfG~ 511 (672)
++|.+++..... .....+++..+..++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||+
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH----~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH----ANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH----hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 588888754321 11235899999999999999999999 8899999999999999 4567899999999
Q ss_pred CccCCCC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 005880 512 SIFAPPS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDG 566 (672)
Q Consensus 512 a~~~~~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~ 566 (672)
++..... ...+|..|+|||++.. ...++.++||||+||++|||++|++||....
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLG-ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcC-CCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 9765432 3456888999997653 2467899999999999999999999997543
No 142
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-39 Score=303.35 Aligned_cols=240 Identities=24% Similarity=0.376 Sum_probs=203.0
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
+.++||+|.||.||+|.. ..|+.||+|.+.-.. +.+++.+|+.+|++++.|++|++||.|+.....|+|||||.-|+
T Consensus 37 i~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGS 114 (502)
T KOG0574|consen 37 IVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGS 114 (502)
T ss_pred HHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCc
Confidence 457899999999999995 479999999987544 67899999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC-----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP----- 517 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~----- 517 (672)
..++++..+ .++++.++..++++.++||+||| ...-||||||+.|||++.+|.+||+|||.|-.+..
T Consensus 115 iSDI~R~R~----K~L~E~EIs~iL~~TLKGL~YLH----~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR 186 (502)
T KOG0574|consen 115 ISDIMRARR----KPLSEQEISAVLRDTLKGLQYLH----DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR 186 (502)
T ss_pred HHHHHHHhc----CCccHHHHHHHHHHHHhHHHHHH----HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhh
Confidence 999998654 67999999999999999999999 77889999999999999999999999999966544
Q ss_pred CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 518 STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 518 ~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
.+..||+-|||||++.. -.|..++||||+|+...||..|++||.+-.+- +. ..-+..
T Consensus 187 NTVIGTPFWMAPEVI~E--IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM-------------------RA--IFMIPT 243 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEE--IGYDTKADIWSLGITAIEMAEGRPPYSDIHPM-------------------RA--IFMIPT 243 (502)
T ss_pred CccccCcccccHHHHHH--hccchhhhHhhhcchhhhhhcCCCCccccccc-------------------ce--eEeccC
Confidence 37789999999998864 46888999999999999999999999642110 00 000111
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.....+...++...++.++++.||-+.|++|-|+.++++
T Consensus 244 ~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 244 KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 112233445677788999999999999999999988765
No 143
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=8.7e-37 Score=309.04 Aligned_cols=242 Identities=26% Similarity=0.385 Sum_probs=195.1
Q ss_pred cccCcCCeEEEEEEEEcC--C--cEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLDD--G--SVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|++|.||+|.+.+ + ..||||.++.... ...+.+.+|++++++++||||+++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999643 3 3699999987665 566789999999999999999999999988 888999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++..... ..+++..++.++.|+++||+||| +.+++||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 80 GSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLE----SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred CcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHH----hCCccccccCcccEEEecCCEEEecccccccccccccc
Confidence 999999976531 45899999999999999999999 889999999999999999999999999998766442
Q ss_pred ------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 519 ------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 519 ------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
...++..|+|||.+. +..++.++|||||||++|||++ |+.||.... ..+..........
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~--~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------------~~~~~~~~~~~~~ 218 (257)
T cd05040 153 HYVMEEHLKVPFAWCAPESLR--TRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS------------GSQILKKIDKEGE 218 (257)
T ss_pred ceecccCCCCCceecCHHHhc--ccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC------------HHHHHHHHHhcCC
Confidence 233567899999654 5578999999999999999999 999985321 1222222221110
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
. ..........+.+++.+|++.+|++||++.|+++.|.
T Consensus 219 ~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 219 R----------LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred c----------CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0 0001122346888999999999999999999999875
No 144
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.2e-36 Score=317.55 Aligned_cols=193 Identities=22% Similarity=0.312 Sum_probs=162.8
Q ss_pred hcccCcC--CeEEEEEEEE-cCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKG--GFGTAYKAVL-DDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G--~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.++||+| +|++||+++. .+|+.||+|+++.... ...+.+.+|+++++.++||||+++++++..++..++||||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4679999 7899999985 5789999999975432 234567889999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
+|+|.+++..... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.++++||+.......
T Consensus 83 ~~~l~~~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH----~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~ 155 (327)
T cd08227 83 YGSAKDLICTHFM---DGMSELAIAYILQGVLKALDYIH----HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHG 155 (327)
T ss_pred CCcHHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCChhhEEEecCCcEEEcccchhhcccccc
Confidence 9999999965431 34899999999999999999999 78999999999999999999999999986533211
Q ss_pred ----------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 518 ----------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 518 ----------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
....++..|+|||++......++.++|||||||++|||++|+.||..
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred ccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 12234567999998754435688999999999999999999999964
No 145
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.4e-36 Score=306.50 Aligned_cols=244 Identities=28% Similarity=0.439 Sum_probs=197.6
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
+.+.||+|+||.||+|..++++.||||.+..... ..+++.+|++++++++|+||+++++++......++||||+++++|
T Consensus 10 i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 88 (261)
T cd05034 10 LERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSL 88 (261)
T ss_pred eeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCH
Confidence 4578999999999999988888999999875443 457899999999999999999999999988999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++.... ...+++.++..++.|++.||+||| +.+++||||||+||++++++.+||+|||++......
T Consensus 89 ~~~i~~~~---~~~~~~~~~~~~~~~i~~al~~lh----~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (261)
T cd05034 89 LDFLKSGE---GKKLRLPQLVDMAAQIAEGMAYLE----SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR 161 (261)
T ss_pred HHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhh
Confidence 99997643 235899999999999999999999 789999999999999999999999999998766432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
....+..|+|||.+. +..++.++||||||+++|||++ |+.||.... .............
T Consensus 162 ~~~~~~~~y~~PE~~~--~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~------------~~~~~~~~~~~~~----- 222 (261)
T cd05034 162 EGAKFPIKWTAPEAAN--YGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT------------NREVLEQVERGYR----- 222 (261)
T ss_pred hccCCCccccCHHHhc--cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC------------HHHHHHHHHcCCC-----
Confidence 222345799999654 5578899999999999999999 999985321 1112222211100
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
.... ......+.+++.+|++.+|++||+++++.+.|+.
T Consensus 223 ---~~~~---~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 ---MPRP---PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ---CCCC---CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 0000 1123467888999999999999999999999875
No 146
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=6.6e-37 Score=326.37 Aligned_cols=244 Identities=23% Similarity=0.307 Sum_probs=192.8
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
+.+.||+|+||.||+++.. +++.||+|++.... ......+.+|+++++.++||||+++++++.+++..++||||++
T Consensus 47 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~ 126 (370)
T cd05596 47 VIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMP 126 (370)
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCC
Confidence 4578999999999999964 68999999986432 2234567889999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|.+++... .++...+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 127 gg~L~~~l~~~------~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~ 196 (370)
T cd05596 127 GGDLVNLMSNY------DIPEKWARFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG 196 (370)
T ss_pred CCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC
Confidence 99999998643 3788889999999999999999 889999999999999999999999999998765432
Q ss_pred -----CCCCCCcccCCCccccC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 519 -----TVPRSNGYRAPELSSSD--GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~--~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
...+|..|+|||++... ...++.++|||||||++|||++|+.||.... .......+.....
T Consensus 197 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~------------~~~~~~~i~~~~~ 264 (370)
T cd05596 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------------LVGTYSKIMDHKN 264 (370)
T ss_pred cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC------------HHHHHHHHHcCCC
Confidence 34578899999987543 2357899999999999999999999997432 2222222222111
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQ--RPNMSHVVKL 637 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~~ 637 (672)
... .+........+.+++.+||+.+|.+ ||++.|+++.
T Consensus 265 ~~~--------~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 265 SLT--------FPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred cCC--------CCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 000 0110112345677888999999987 9999999653
No 147
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.1e-36 Score=317.71 Aligned_cols=235 Identities=27% Similarity=0.378 Sum_probs=185.8
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcC-CCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGR-LRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+.. +++.||||+++... ......+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36899999999999965 57899999987532 1234556677788776 4899999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|.+++... ..+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~LH----~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 151 (316)
T cd05619 81 GDLMFHIQSC-----HKFDLPRATFYAAEIICGLQFLH----SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA 151 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC
Confidence 9999999753 34889999999999999999999 78999999999999999999999999999875322
Q ss_pred --CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 518 --STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 518 --~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
....+|..|+|||++. +..++.++|||||||++|||++|+.||.... ..+.........
T Consensus 152 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~il~el~~G~~pf~~~~------------~~~~~~~i~~~~----- 212 (316)
T cd05619 152 KTCTFCGTPDYIAPEILL--GQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD------------EEELFQSIRMDN----- 212 (316)
T ss_pred ceeeecCCccccCHHHHc--CCCCCchhhhhhHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHhCC-----
Confidence 1345788999999764 4578999999999999999999999996432 112222211111
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHH-HHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMS-HVV 635 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~-evl 635 (672)
+.. .. .....+.+++.+||+.||++||++. ++.
T Consensus 213 --~~~--~~---~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 213 --PCY--PR---WLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred --CCC--Cc---cCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 000 01 1123467788899999999999997 554
No 148
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.5e-37 Score=326.87 Aligned_cols=244 Identities=20% Similarity=0.316 Sum_probs=193.4
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
+.+.||+|+||.||+++.. +|+.||+|+++.... ...+.+.+|+.+++.++|+||+++++++.+.+..++||||++
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (330)
T cd05601 5 VKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQP 84 (330)
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCC
Confidence 3478999999999999954 689999999975322 245678899999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|.+++.... ..+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 85 ~~~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~lH----~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 85 GGDLLSLLNRYE----DQFDEDMAQFYLAELVLAIHSVH----QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 999999997653 35899999999999999999999 889999999999999999999999999999765432
Q ss_pred -----CCCCCCcccCCCccccC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 519 -----TVPRSNGYRAPELSSSD----GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~----~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
...+|..|+|||++... ...++.++|||||||++|||++|+.||.... ....+..+...
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~------------~~~~~~~i~~~ 224 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT------------SAKTYNNIMNF 224 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC------------HHHHHHHHHcC
Confidence 23578899999986531 3467889999999999999999999996432 11222222221
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... .+........+.+++..|+. +|.+|||+.++++
T Consensus 225 ~~~~~--------~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 225 QRFLK--------FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCccC--------CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 11000 01101122346677789997 9999999999874
No 149
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.8e-36 Score=314.61 Aligned_cols=254 Identities=25% Similarity=0.384 Sum_probs=196.8
Q ss_pred HhcccCcCCeEEEEEEEEc-CCc--EEEEEEcccCC-cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGS--VVAVKRLKDAS-IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
+.+.||+|+||.||+|... +|. .+|+|.++... ......+.+|++++.++ +||||+++++++..++..++||||+
T Consensus 11 ~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 90 (303)
T cd05088 11 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 90 (303)
T ss_pred eeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeC
Confidence 4578999999999999964 454 46888776532 23456788999999999 8999999999999999999999999
Q ss_pred CCCChhHHhhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEe
Q 005880 439 PNGSLFWLLHGNRG-----------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVS 507 (672)
Q Consensus 439 ~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~ 507 (672)
++|+|.++++.... .....+++.+++.++.|+++||+||| +.+|+||||||+||++++++.+||+
T Consensus 91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH----~~gi~H~dlkp~Nili~~~~~~kl~ 166 (303)
T cd05088 91 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS----QKQFIHRDLAARNILVGENYVAKIA 166 (303)
T ss_pred CCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH----hCCccccccchheEEecCCCcEEeC
Confidence 99999999975431 11235899999999999999999999 8899999999999999999999999
Q ss_pred ccCCCccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHH
Q 005880 508 DFGLSIFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRW 582 (672)
Q Consensus 508 DfG~a~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~ 582 (672)
|||++...... ....+..|+|||++. +..++.++|||||||++|||+| |..||.... ..+.
T Consensus 167 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------------~~~~ 232 (303)
T cd05088 167 DFGLSRGQEVYVKKTMGRLPVRWMAIESLN--YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT------------CAEL 232 (303)
T ss_pred ccccCcccchhhhcccCCCcccccCHHHHh--ccCCcccccchhhhhHHHHHHhcCCCCcccCC------------hHHH
Confidence 99998643221 112245799999653 4568899999999999999998 999986432 1122
Q ss_pred HHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCC
Q 005880 583 VQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEV 646 (672)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 646 (672)
..... ..... ... ......+.+++.+||+.+|++||++.++++.|+++.....
T Consensus 233 ~~~~~-~~~~~-------~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 233 YEKLP-QGYRL-------EKP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred HHHHh-cCCcC-------CCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 22111 10000 000 1122357788999999999999999999999999865444
No 150
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.7e-37 Score=335.63 Aligned_cols=243 Identities=24% Similarity=0.306 Sum_probs=193.0
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC--------eEEE
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE--------EKLL 433 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--------~~~l 433 (672)
.+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+.++..++|+||+++++.+...+ ..++
T Consensus 37 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~l 116 (496)
T PTZ00283 37 SRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIAL 116 (496)
T ss_pred EEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEE
Confidence 47899999999999984 579999999986533 234567889999999999999999988775432 3579
Q ss_pred EEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 434 VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
||||+++|+|.++++.... ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 117 V~Ey~~~gsL~~~l~~~~~-~~~~l~e~~~~~i~~qll~aL~~lH----~~~IiHrDLKP~NILl~~~~~vkL~DFGls~ 191 (496)
T PTZ00283 117 VLDYANAGDLRQEIKSRAK-TNRTFREHEAGLLFIQVLLAVHHVH----SKHMIHRDIKSANILLCSNGLVKLGDFGFSK 191 (496)
T ss_pred EEeCCCCCcHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEeCCCCEEEEecccCe
Confidence 9999999999999975432 2346899999999999999999999 8899999999999999999999999999987
Q ss_pred cCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 514 FAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 514 ~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
..... ...+|..|+|||++. +..++.++|||||||++|||++|+.||... +..+.+...
T Consensus 192 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~--~~~~s~k~DVwSlGvilyeLltG~~Pf~~~------------~~~~~~~~~ 257 (496)
T PTZ00283 192 MYAATVSDDVGRTFCGTPYYVAPEIWR--RKPYSKKADMFSLGVLLYELLTLKRPFDGE------------NMEEVMHKT 257 (496)
T ss_pred eccccccccccccccCCcceeCHHHhC--CCCCCcHHHHHHHHHHHHHHHHCCCCCCCC------------CHHHHHHHH
Confidence 65421 345788999999764 467899999999999999999999999642 223333333
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
..... ++ .. .....++.+++.+||+.||.+||++.++++.
T Consensus 258 ~~~~~-----~~---~~---~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 258 LAGRY-----DP---LP---PSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred hcCCC-----CC---CC---CCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 22211 10 00 1123457788889999999999999999863
No 151
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.3e-36 Score=312.65 Aligned_cols=255 Identities=22% Similarity=0.334 Sum_probs=192.3
Q ss_pred HhcccCcCCeEEEEEEEEcC---------------CcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEc
Q 005880 364 SAEMLGKGGFGTAYKAVLDD---------------GSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~---------------g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 427 (672)
+.+.||+|+||.||+++..+ ...||+|.++... ......|.+|++++.+++|+||+++++++..
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 88 (295)
T cd05097 9 LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVS 88 (295)
T ss_pred ehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcC
Confidence 45779999999999988542 2358999987542 2245679999999999999999999999999
Q ss_pred CCeEEEEEeecCCCChhHHhhcCCC-------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC
Q 005880 428 REEKLLVSEYMPNGSLFWLLHGNRG-------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK 500 (672)
Q Consensus 428 ~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~ 500 (672)
.+..++||||+++++|.+++..... .....+++..++.++.|+++||+||| +.+++||||||+||++++
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~i~H~dlkp~Nill~~ 164 (295)
T cd05097 89 DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA----SLNFVHRDLATRNCLVGN 164 (295)
T ss_pred CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH----hcCeeccccChhhEEEcC
Confidence 9999999999999999999865321 11234789999999999999999999 789999999999999999
Q ss_pred CCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCCCCCCC
Q 005880 501 TGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT--GKCPSVIDGGGAGM 571 (672)
Q Consensus 501 ~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t--g~~P~~~~~~~~~~ 571 (672)
++.+||+|||++...... ...++..|+|||++. +..++.++|||||||++|||++ |..||......
T Consensus 165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~--- 239 (295)
T cd05097 165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESIL--LGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE--- 239 (295)
T ss_pred CCcEEecccccccccccCcceeccCcCcCceeecChhhhc--cCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH---
Confidence 999999999998755332 122356799999654 4568999999999999999998 56676532211
Q ss_pred CCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 572 GCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
.................... .. ......+.+++.+||+.||++||++.+|++.|++
T Consensus 240 ------~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 240 ------QVIENTGEFFRNQGRQIYLS----QT---PLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred ------HHHHHHHHhhhhccccccCC----CC---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 11111111111110000000 00 1123468899999999999999999999998863
No 152
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.5e-36 Score=314.20 Aligned_cols=239 Identities=24% Similarity=0.393 Sum_probs=193.7
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||.||+|+. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++....+.++||||+++++|
T Consensus 25 ~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L 104 (296)
T cd06654 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (296)
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCH
Confidence 46799999999999995 46899999998766555667889999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 105 ~~~~~~~------~~~~~~~~~i~~ql~~aL~~LH----~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 174 (296)
T cd06654 105 TDVVTET------CMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (296)
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccC
Confidence 9998643 3789999999999999999999 789999999999999999999999999998755432
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...++..|+|||.+. +..++.++|||||||++|||++|+.||...... ..+.. ..... ..
T Consensus 175 ~~~~~~~y~aPE~~~--~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~-----------~~~~~-~~~~~-~~----- 234 (296)
T cd06654 175 TMVGTPYWMAPEVVT--RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-----------RALYL-IATNG-TP----- 234 (296)
T ss_pred cccCCccccCHHHHc--CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH-----------HhHHH-HhcCC-CC-----
Confidence 345677899999654 456789999999999999999999999643211 11111 11110 00
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .........+.+++.+||..+|++||++.|+++
T Consensus 235 ~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 235 EL---QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CC---CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 00 011122345778889999999999999999986
No 153
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=9.3e-37 Score=309.16 Aligned_cols=240 Identities=26% Similarity=0.390 Sum_probs=188.7
Q ss_pred cccCcCCeEEEEEEEEcC--------CcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 366 EMLGKGGFGTAYKAVLDD--------GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999998542 234888888655544567889999999999999999999999998999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc--------EEEecc
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN--------ARVSDF 509 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~--------~kl~Df 509 (672)
+++|+|.++++... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++. ++++||
T Consensus 81 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 81 VKFGSLDTYLKKNK----NLINISWKLEVAKQLAWALHFLE----DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred CCCCcHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCccceEEEecccccccCCCceEEeccc
Confidence 99999999997653 35899999999999999999999 889999999999999987765 699999
Q ss_pred CCCccCCCC-CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCC-CCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 510 GLSIFAPPS-TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGK-CPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 510 G~a~~~~~~-~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~-~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
|++...... ...++..|+|||++.. ...++.++|||||||++|||++|. .||.... ...... ..
T Consensus 153 g~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~------------~~~~~~-~~ 218 (258)
T cd05078 153 GISITVLPKEILLERIPWVPPECIEN-PQNLSLAADKWSFGTTLWEIFSGGDKPLSALD------------SQKKLQ-FY 218 (258)
T ss_pred ccccccCCchhccccCCccCchhccC-CCCCCchhhHHHHHHHHHHHHcCCCCChhhcc------------HHHHHH-HH
Confidence 998765443 4567788999997642 345788999999999999999995 5553211 111111 11
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
.... .. + .....++.+++.+||+.||++|||++++++.|+
T Consensus 219 ~~~~-------~~---~--~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 219 EDRH-------QL---P--APKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred Hccc-------cC---C--CCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1100 00 0 111235788899999999999999999998863
No 154
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1e-36 Score=318.57 Aligned_cols=236 Identities=26% Similarity=0.358 Sum_probs=188.8
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+.. +++.||||+++... ......+.+|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999965 57899999997532 22345677888888877 799999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~-----~l~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 151 (318)
T cd05570 81 GDLMFHIQRSG-----RFDEPRARFYAAEIVLGLQFLH----ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV 151 (318)
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH----hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC
Confidence 99999887542 4899999999999999999999 889999999999999999999999999998653221
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||.... .............
T Consensus 152 ~~~~~~g~~~y~aPE~~~--~~~~~~~~DiwslGvil~~l~~G~~pf~~~~------------~~~~~~~i~~~~~---- 213 (318)
T cd05570 152 TTSTFCGTPDYIAPEILS--YQPYGPAVDWWALGVLLYEMLAGQSPFEGDD------------EDELFQSILEDEV---- 213 (318)
T ss_pred cccceecCccccCHHHhc--CCCCCcchhhhhHHHHHHHHhhCCCCCCCCC------------HHHHHHHHHcCCC----
Confidence 345788999999764 5678899999999999999999999996432 1222222221110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM-----SHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~-----~evl~ 636 (672)
.... .....+.+++.+||+.||.+||++ .++++
T Consensus 214 -----~~~~---~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 214 -----RYPR---WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred -----CCCC---cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 0011 122357788889999999999999 77754
No 155
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.6e-36 Score=323.12 Aligned_cols=190 Identities=25% Similarity=0.372 Sum_probs=165.9
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|... +++.||||+++.... .....+.+|++++.+++|+||+++++++.+....++||||+++
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~g 85 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPG 85 (363)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCC
Confidence 478999999999999854 689999999975322 2345678899999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 86 g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH----~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 86 GDMMTLLMKK-----DTLTEEETQFYIAETVLAIDSIH----QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence 9999999754 35899999999999999999999 88999999999999999999999999999865421
Q ss_pred -------------------------------------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCC
Q 005880 518 -------------------------------------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKC 560 (672)
Q Consensus 518 -------------------------------------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~ 560 (672)
....||..|+|||++. +..++.++|||||||++|||++|+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~--~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFM--QTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHc--CCCCCCchhhhhhHHHHHHHHhCCC
Confidence 1235788999999765 4578899999999999999999999
Q ss_pred CCCCC
Q 005880 561 PSVID 565 (672)
Q Consensus 561 P~~~~ 565 (672)
||...
T Consensus 235 Pf~~~ 239 (363)
T cd05628 235 PFCSE 239 (363)
T ss_pred CCCCC
Confidence 99643
No 156
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=5.7e-37 Score=321.27 Aligned_cols=232 Identities=26% Similarity=0.398 Sum_probs=183.8
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHH-HHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHME-VLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+.. +|+.||+|++..... ....++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36899999999999965 689999999874322 12334455544 56789999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH----~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 151 (323)
T cd05575 81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLH----SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK 151 (323)
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC
Confidence 9999998754 35889999999999999999999 78999999999999999999999999999875322
Q ss_pred --CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 518 --STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 518 --~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
....++..|+|||++. +..++.++|||||||++|||++|+.||... +..+.........
T Consensus 152 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~il~ell~g~~pf~~~------------~~~~~~~~i~~~~----- 212 (323)
T cd05575 152 TTSTFCGTPEYLAPEVLR--KQPYDRTVDWWCLGAVLYEMLYGLPPFYSR------------DTAEMYDNILNKP----- 212 (323)
T ss_pred ccccccCChhhcChhhhc--CCCCCccccccccchhhhhhhcCCCCCCCC------------CHHHHHHHHHcCC-----
Confidence 1345788999999764 567889999999999999999999999643 2222222222211
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMS 632 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 632 (672)
....... ...+.+++.+||+.||.+||++.
T Consensus 213 ----~~~~~~~---~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 213 ----LRLKPNI---SVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ----CCCCCCC---CHHHHHHHHHHhhcCHHhCCCCC
Confidence 0011111 33567888899999999999985
No 157
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4e-36 Score=309.75 Aligned_cols=251 Identities=23% Similarity=0.340 Sum_probs=195.9
Q ss_pred HHhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEE
Q 005880 363 ASAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 435 (672)
.+.+.||+|+||.||+|..+ .+..||+|.++... ......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 9 ~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 88 (288)
T cd05061 9 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVM 88 (288)
T ss_pred eeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 34578999999999999753 24589999986443 223456888999999999999999999999999999999
Q ss_pred eecCCCChhHHhhcCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 436 EYMPNGSLFWLLHGNRG-----PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
||+++|+|.+++..... .+....++..+.+++.|++.||+||| +++|+||||||+||++++++.++|+|||
T Consensus 89 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dikp~nili~~~~~~~L~Dfg 164 (288)
T cd05061 89 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN----AKKFVHRDLAARNCMVAHDFTVKIGDFG 164 (288)
T ss_pred eCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCCcCCCCChheEEEcCCCcEEECcCC
Confidence 99999999999975321 12345688899999999999999999 8899999999999999999999999999
Q ss_pred CCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHH
Q 005880 511 LSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRW 582 (672)
Q Consensus 511 ~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~ 582 (672)
+++..... ...++..|+|||.+. +..++.++|||||||++|||++ |+.||... ...++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~--~~~~~~~~DvwslG~~l~el~~~~~~p~~~~------------~~~~~ 230 (288)
T cd05061 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLK--DGVFTTSSDMWSFGVVLWEITSLAEQPYQGL------------SNEQV 230 (288)
T ss_pred ccccccccccccccCCCcccccccCHHHhc--cCCCChHhHHHHHHHHHHHHHhCCCCCCCCC------------CHHHH
Confidence 98754332 122355799999654 4578999999999999999998 78888532 11222
Q ss_pred HHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 583 VQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
.......... .. .......+.+++.+|++.||++|||+.|+++.|++..
T Consensus 231 ~~~~~~~~~~---------~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 231 LKFVMDGGYL---------DQ--PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHHcCCCC---------CC--CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 2222211110 00 0112346888999999999999999999999998763
No 158
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-36 Score=308.10 Aligned_cols=246 Identities=21% Similarity=0.319 Sum_probs=193.9
Q ss_pred HHhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 363 ASAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
...+.||+|+||.||+|+. .+++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||++++
T Consensus 12 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~ 91 (267)
T cd06645 12 ELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGG 91 (267)
T ss_pred HHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCC
Confidence 4567899999999999995 468999999987655445567889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++... ..+++.++..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++......
T Consensus 92 ~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd06645 92 SLQDIYHVT-----GPLSESQIAYVSRETLQGLYYLH----SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK 162 (267)
T ss_pred cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccc
Confidence 999998643 35899999999999999999999 789999999999999999999999999998654322
Q ss_pred --CCCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 --TVPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++.. ....++.++|||||||++|||++|+.||....... .+...........
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~------------~~~~~~~~~~~~~- 229 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR------------ALFLMTKSNFQPP- 229 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh------------hHHhhhccCCCCC-
Confidence 3457889999997632 23457889999999999999999999986432110 0111111111000
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.... .......+.+++.+|++.+|++||++.+|++
T Consensus 230 ---~~~~---~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 230 ---KLKD---KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ---cccc---cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0000 0011234678888999999999999999875
No 159
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.3e-36 Score=312.85 Aligned_cols=243 Identities=24% Similarity=0.335 Sum_probs=191.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||++... +++.||||++...... ....+.+|++++++++||||+++++++..++..++||||+++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 84 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCC
Confidence 468999999999999954 6899999998753321 235678899999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++.... ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+|||++......
T Consensus 85 ~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 85 GDLKFHIYNMG---NPGFDEERAVFYAAEITCGLEDLH----RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred CcHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence 99998886432 245899999999999999999999 789999999999999999999999999999765432
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++. +..++.++||||+||++|||++|+.||...... ...+.+........
T Consensus 158 ~~~~~~~~~y~aPE~~~--~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~---------~~~~~~~~~~~~~~----- 221 (285)
T cd05605 158 IRGRVGTVGYMAPEVVK--NERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK---------VKREEVERRVKEDQ----- 221 (285)
T ss_pred cccccCCCCccCcHHhc--CCCCCccccchhHHHHHHHHHHCCCCCCCCchh---------hHHHHHHHHhhhcc-----
Confidence 345688999999764 457889999999999999999999999753211 11111111111100
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 636 (672)
. .........+.+++.+||+.||++|| ++.++++
T Consensus 222 ----~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 222 ----E--EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred ----c--ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 0 00112234577888999999999999 7778754
No 160
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6e-37 Score=322.51 Aligned_cols=243 Identities=23% Similarity=0.321 Sum_probs=189.3
Q ss_pred HhcccCcCCeEEEEEEEE----cCCcEEEEEEcccCC----cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDAS----IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLV 434 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 434 (672)
+.+.||+|+||.||+++. .+|+.||+|++++.. ....+.+.+|++++..+ +|+||+++++++..++..++|
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (332)
T cd05614 4 LLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLI 83 (332)
T ss_pred EEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEE
Confidence 357899999999999985 357899999986432 12345678899999999 599999999999999999999
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
|||+++|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 84 ~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH----~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 84 LDYVSGGEMFTHLYQR-----DNFSEDEVRFYSGEIILALEHLH----KLGIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 9999999999998753 34899999999999999999999 78999999999999999999999999999975
Q ss_pred CCCC------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 515 APPS------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 515 ~~~~------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
.... ...+|..|+|||++.. ...++.++|||||||++|||+||+.||....... ...........
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--------~~~~~~~~~~~ 225 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRG-KGGHGKAVDWWSLGILIFELLTGASPFTLEGERN--------TQSEVSRRILK 225 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcC-CCCCCCccccccchhhhhhhhcCCCCCCCCCCCC--------CHHHHHHHHhc
Confidence 4322 3457889999997642 2347889999999999999999999997543211 11111111111
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVK 636 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 636 (672)
. ++.. .. .....+.+++.+||+.||++|| +++++++
T Consensus 226 ~-------~~~~--~~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 226 C-------DPPF--PS---FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred C-------CCCC--CC---CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 1 1111 01 1223467788899999999999 6667764
No 161
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.2e-36 Score=313.88 Aligned_cols=251 Identities=23% Similarity=0.308 Sum_probs=184.5
Q ss_pred HhcccCcCCeEEEEEEEEc--CCcEEEEEEcccCCc--chHHHHHHHHHHHcCC---CCCceeeeEEEEEc-----CCeE
Q 005880 364 SAEMLGKGGFGTAYKAVLD--DGSVVAVKRLKDASI--GGKREFEQHMEVLGRL---RHPNLVGLKAYYFA-----REEK 431 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----~~~~ 431 (672)
+.+.||+|+||.||+|+.. +|+.||||+++.... .....+.+|+++++.+ +||||+++++++.. ....
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~ 84 (290)
T cd07862 5 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 84 (290)
T ss_pred eeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcE
Confidence 3578999999999999853 478899999864322 2234566677766655 69999999999862 3467
Q ss_pred EEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCC
Q 005880 432 LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL 511 (672)
Q Consensus 432 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~ 511 (672)
++||||++ ++|.+++.... ...+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 85 ~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH----~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 85 TLVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred EEEEccCC-CCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 89999996 69999987543 235899999999999999999999 78999999999999999999999999999
Q ss_pred CccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 512 SIFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 512 a~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
++..... ...++..|+|||++. +..++.++|||||||++|||++|++||...... +.+..+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~------------~~~~~i~ 222 (290)
T cd07862 157 ARIYSFQMALTSVVVTLWYRAPEVLL--QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV------------DQLGKIL 222 (290)
T ss_pred eEeccCCcccccccccccccChHHHh--CCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH------------HHHHHHH
Confidence 9765432 345688999999764 457889999999999999999999999754321 1111111
Q ss_pred hh-------hccc------cccchhhcc-c-cChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 588 RE-------EWTA------EVFDLELMR-Y-KDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 588 ~~-------~~~~------~~~d~~~~~-~-~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .+.. ..+...... . .........+.+++.+||+.||++|||+.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 223 DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 10 0000 000000000 0 000012235678899999999999999999974
No 162
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.7e-36 Score=310.60 Aligned_cols=245 Identities=22% Similarity=0.350 Sum_probs=194.6
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.+.||+|+||.||+|... ++..||+|.+........+.+.+|+++++.++||||+++++++..++..++||||++++
T Consensus 15 ~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 94 (292)
T cd06644 15 EIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGG 94 (292)
T ss_pred hhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCC
Confidence 34578999999999999965 58999999998766556778899999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|..++.... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 95 ~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 166 (292)
T cd06644 95 AVDAIMLELD----RGLTEPQIQVICRQMLEALQYLH----SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR 166 (292)
T ss_pred cHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHh----cCCeeecCCCcceEEEcCCCCEEEccCccceeccccccc
Confidence 9988876433 35899999999999999999999 889999999999999999999999999998654322
Q ss_pred --CCCCCCcccCCCcccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 519 --TVPRSNGYRAPELSSS---DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~---~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
...++..|+|||++.. ....++.++|||||||++|||++|+.||.... ....+.......
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~------------~~~~~~~~~~~~--- 231 (292)
T cd06644 167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN------------PMRVLLKIAKSE--- 231 (292)
T ss_pred cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc------------HHHHHHHHhcCC---
Confidence 3346778999997643 23456889999999999999999999986431 111111111110
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.+... ........+.+++.+||..+|++||++.|+++
T Consensus 232 ---~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 232 ---PPTLS---QPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ---CccCC---CCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000 01122345778889999999999999999964
No 163
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.1e-36 Score=318.09 Aligned_cols=235 Identities=27% Similarity=0.361 Sum_probs=185.6
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+.. +|+.||+|.++... ......+..|.+++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 36999999999999965 68999999987532 12345567788887654 899999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 g~L~~~i~~~-----~~~~~~~~~~~~~qi~~~l~~lH----~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 151 (316)
T cd05620 81 GDLMFHIQDK-----GRFDLYRATFYAAEIVCGLQFLH----SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN 151 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC
Confidence 9999998653 34889999999999999999999 88999999999999999999999999999874321
Q ss_pred --CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 518 --STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 518 --~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
....+|..|+|||++. +..++.++|||||||++|||++|+.||.... ..+.........
T Consensus 152 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslGvil~el~~g~~Pf~~~~------------~~~~~~~~~~~~----- 212 (316)
T cd05620 152 RASTFCGTPDYIAPEILQ--GLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD------------EDELFESIRVDT----- 212 (316)
T ss_pred ceeccCCCcCccCHHHHc--CCCCCcccchhhhHHHHHHHHhCCCCCCCCC------------HHHHHHHHHhCC-----
Confidence 2456789999999764 5578999999999999999999999996432 112222211110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHH-HHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMS-HVV 635 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~-evl 635 (672)
+... .. ...++.+++.+||+.||++||++. +++
T Consensus 213 --~~~~--~~---~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 213 --PHYP--RW---ITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred --CCCC--CC---CCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0000 11 123467788899999999999985 554
No 164
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.7e-36 Score=304.30 Aligned_cols=241 Identities=26% Similarity=0.427 Sum_probs=194.7
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
+.+.||+|+||.||+|...++..+|+|.++.... ...++.+|++++++++|||++++++++......++||||+++++|
T Consensus 8 ~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L 86 (256)
T cd05112 8 LVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCL 86 (256)
T ss_pred EEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcH
Confidence 3578999999999999987788999999875443 456789999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.++.....
T Consensus 87 ~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH----~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (256)
T cd05112 87 SDYLRAQR----GKFSQETLLGMCLDVCEGMAYLE----SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS 158 (256)
T ss_pred HHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHH----HCCccccccccceEEEcCCCeEEECCCcceeecccCccccc
Confidence 99997543 35889999999999999999999 789999999999999999999999999998755332
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
....+.+|+|||.+. +..++.++||||||+++|||++ |+.||.... ............ ...
T Consensus 159 ~~~~~~~~~~aPe~~~--~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~------------~~~~~~~~~~~~---~~~ 221 (256)
T cd05112 159 TGTKFPVKWSSPEVFS--FSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS------------NSEVVETINAGF---RLY 221 (256)
T ss_pred CCCccchhhcCHhHhc--cCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC------------HHHHHHHHhCCC---CCC
Confidence 122345799999664 4678899999999999999998 999986432 112222221110 001
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 638 (672)
.+. .....+.+++.+||+.+|++|||+.|+++.|
T Consensus 222 ~~~--------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 222 KPR--------LASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCC--------CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 111 1224688899999999999999999999887
No 165
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.4e-36 Score=304.34 Aligned_cols=240 Identities=28% Similarity=0.407 Sum_probs=194.9
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccC--CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA--SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|++|.||+|... +|+.|++|.+... ......++.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENG 84 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCC
Confidence 467999999999999965 6899999998643 2335678899999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.++++... ...+++..++.++.|+++||.||| +.+++||||||+||++++++.++|+|||+++.....
T Consensus 85 ~L~~~l~~~~---~~~~~~~~~~~i~~~l~~al~~lH----~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~ 157 (256)
T cd08529 85 DLHKLLKMQR---GRPLPEDQVWRFFIQILLGLAHLH----SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF 157 (256)
T ss_pred cHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccch
Confidence 9999998643 246899999999999999999999 789999999999999999999999999998765443
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||.... ............ ...
T Consensus 158 ~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------------~~~~~~~~~~~~-~~~-- 220 (256)
T cd08529 158 ANTIVGTPYYLSPELCE--DKPYNEKSDVWALGVVLYECCTGKHPFDANN------------QGALILKIIRGV-FPP-- 220 (256)
T ss_pred hhccccCccccCHHHhc--CCCCCCccchHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHcCC-CCC--
Confidence 234677899999764 4568899999999999999999999996432 111111111110 000
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
........+.+++.+||+.+|++||++.++++
T Consensus 221 --------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 221 --------VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred --------CccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 00123346888999999999999999999975
No 166
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.1e-36 Score=309.88 Aligned_cols=248 Identities=24% Similarity=0.350 Sum_probs=195.6
Q ss_pred HHhcccCcCCeEEEEEEEEcC------CcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEE
Q 005880 363 ASAEMLGKGGFGTAYKAVLDD------GSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 435 (672)
...+.||+|+||.||+|...+ +..||+|.+.... ......+.+|+.++..++||||+++++++......++||
T Consensus 9 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~ 88 (277)
T cd05032 9 TLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVM 88 (277)
T ss_pred eEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEE
Confidence 345789999999999998642 3689999987543 234567889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhcCCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 436 EYMPNGSLFWLLHGNRGP-----GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
||+++|+|.+++...... ....++|..++.++.|++.||.||| +.+|+||||||+||++++++.+||+|||
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~di~p~nill~~~~~~kl~dfg 164 (277)
T cd05032 89 ELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA----AKKFVHRDLAARNCMVAEDLTVKIGDFG 164 (277)
T ss_pred ecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH----hCCccccccChheEEEcCCCCEEECCcc
Confidence 999999999999754321 1235789999999999999999999 8899999999999999999999999999
Q ss_pred CCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHH
Q 005880 511 LSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRW 582 (672)
Q Consensus 511 ~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~ 582 (672)
+++..... ...++..|+|||.+. +..++.++|||||||++||++| |+.||.... ..+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~el~t~g~~p~~~~~------------~~~~ 230 (277)
T cd05032 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLK--DGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS------------NEEV 230 (277)
T ss_pred cchhhccCcccccCCCCCccccccCHHHHh--cCCCCcccchHHHHHHHHHhhccCCCCCccCC------------HHHH
Confidence 98754332 223456899999654 4568899999999999999998 899985322 1111
Q ss_pred HHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 583 VQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
..... ....... .......+.+++.+||+.+|++|||+.|+++.|+
T Consensus 231 ~~~~~-~~~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 231 LKFVI-DGGHLDL----------PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHh-cCCCCCC----------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 11111 1110000 0112446788999999999999999999999886
No 167
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-37 Score=321.52 Aligned_cols=240 Identities=26% Similarity=0.374 Sum_probs=193.9
Q ss_pred ccCHHHHHHHHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHHcCC-CCCceeeeEEEEEcC
Q 005880 354 RFELEDLLRASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVLGRL-RHPNLVGLKAYYFAR 428 (672)
Q Consensus 354 ~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 428 (672)
++.+++. .+..+||+|.||+|+++..+ +++.+|||.+++..+- +.+..+.|-+++... +||.++.++.+|...
T Consensus 364 ~~~l~~F--~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~ 441 (694)
T KOG0694|consen 364 PLTLDDF--RLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK 441 (694)
T ss_pred cccccce--EEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC
Confidence 3444443 34578999999999999965 5889999999976543 345567777777666 699999999999999
Q ss_pred CeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEec
Q 005880 429 EEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSD 508 (672)
Q Consensus 429 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 508 (672)
++.|.||||+.||++..+.+. ..+++..+.-++..|+.||.||| +++||+||||.+|||+|.+|++||+|
T Consensus 442 ~~l~fvmey~~Ggdm~~~~~~------~~F~e~rarfyaAev~l~L~fLH----~~~IIYRDlKLdNiLLD~eGh~kiAD 511 (694)
T KOG0694|consen 442 EHLFFVMEYVAGGDLMHHIHT------DVFSEPRARFYAAEVVLGLQFLH----ENGIIYRDLKLDNLLLDTEGHVKIAD 511 (694)
T ss_pred CeEEEEEEecCCCcEEEEEec------ccccHHHHHHHHHHHHHHHHHHH----hcCceeeecchhheEEcccCcEEecc
Confidence 999999999999996555443 34899999999999999999999 89999999999999999999999999
Q ss_pred cCCCccCC-----CCCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHH
Q 005880 509 FGLSIFAP-----PSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWV 583 (672)
Q Consensus 509 fG~a~~~~-----~~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 583 (672)
||+++..- .++.+||+.|+|||++. +..|+.++|.|||||+||||+.|..||.+++++ +.+
T Consensus 512 FGlcKe~m~~g~~TsTfCGTpey~aPEil~--e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe------------e~F 577 (694)
T KOG0694|consen 512 FGLCKEGMGQGDRTSTFCGTPEFLAPEVLT--EQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE------------EVF 577 (694)
T ss_pred cccccccCCCCCccccccCChhhcChhhhc--cCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH------------HHH
Confidence 99998654 23788999999999886 569999999999999999999999999866433 233
Q ss_pred HHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH
Q 005880 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM 631 (672)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 631 (672)
..+..++. .-+.. ...+.+.++.+++.++|++|.-+
T Consensus 578 dsI~~d~~---------~yP~~---ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 578 DSIVNDEV---------RYPRF---LSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHhcCCC---------CCCCc---ccHHHHHHHHHHhccCcccccCC
Confidence 33333321 11122 23456677779999999999876
No 168
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.1e-36 Score=309.00 Aligned_cols=259 Identities=26% Similarity=0.347 Sum_probs=196.4
Q ss_pred HHHhcccCcCCeEEEEEEEE-----cCCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEE
Q 005880 362 RASAEMLGKGGFGTAYKAVL-----DDGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLL 433 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 433 (672)
+.+.+.||+|+||.||++.+ .++..||+|.++... ......+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 45567899999999999984 357889999987543 23456799999999999999999999998875 56789
Q ss_pred EEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 434 VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
||||+++++|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 86 v~e~~~g~~L~~~l~~~~----~~~~~~~~~~i~~~i~~aL~~lH----~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 86 IMEFLPSGSLKEYLPRNK----NKINLKQQLKYAVQICKGMDYLG----SRQYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred EEEccCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeecccchheEEEcCCCCEEECCCcccc
Confidence 999999999999996542 35899999999999999999999 8899999999999999999999999999997
Q ss_pred cCCCC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCC--CCC-CCCCCChhHH
Q 005880 514 FAPPS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGA--GMG-CGGAVDLPRW 582 (672)
Q Consensus 514 ~~~~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~--~~~-~~~~~~~~~~ 582 (672)
..... ...++..|+|||++. +..++.++|||||||++|||+|++.|+....... ... .........+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~--~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLI--QSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhc--cCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 65432 233455799999764 4578899999999999999999887653221100 000 0001111111
Q ss_pred HHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 583 VQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
+.. ...... .+........+.+++.+||+.+|++|||+.++++.|+++
T Consensus 236 ~~~-~~~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 236 VRV-LEEGKR----------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHH-HHcCcc----------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111 111100 000112334688899999999999999999999999876
No 169
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3e-36 Score=311.90 Aligned_cols=254 Identities=25% Similarity=0.357 Sum_probs=194.7
Q ss_pred HhcccCcCCeEEEEEEEEcC-----------------CcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLDD-----------------GSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYY 425 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 425 (672)
+.+.||+|+||.||+|...+ +..||+|.+.... ....+++.+|++++++++||||+++++++
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 88 (296)
T cd05051 9 FVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVC 88 (296)
T ss_pred ccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 45789999999999998542 2468999987543 23466889999999999999999999999
Q ss_pred EcCCeEEEEEeecCCCChhHHhhcCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC
Q 005880 426 FAREEKLLVSEYMPNGSLFWLLHGNRGP------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499 (672)
Q Consensus 426 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~ 499 (672)
..++..++||||+++++|.+++...... ....+++..++.++.|+++||+||| +.+|+||||||+||+++
T Consensus 89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH----~~~i~H~dlkp~Nili~ 164 (296)
T cd05051 89 TVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE----SLNFVHRDLATRNCLVG 164 (296)
T ss_pred ecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH----HcCccccccchhceeec
Confidence 9999999999999999999999765421 1236899999999999999999999 78999999999999999
Q ss_pred CCCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCCCCCC
Q 005880 500 KTGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT--GKCPSVIDGGGAG 570 (672)
Q Consensus 500 ~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t--g~~P~~~~~~~~~ 570 (672)
.++.++|+|||+++..... ...++..|+|||.+. +..++.++|||||||++|||++ |..||.....
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~--- 239 (296)
T cd05051 165 KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVL--LGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD--- 239 (296)
T ss_pred CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhh--cCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh---
Confidence 9999999999998754332 223456799999654 4578999999999999999998 6777753211
Q ss_pred CCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 571 MGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
...........+......... .......++.+++.+||+.||++|||+.||++.|+
T Consensus 240 ------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 ------QQVIENAGHFFRDDGRQIYLP-------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred ------HHHHHHHHhccccccccccCC-------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 011111111111100000000 01112346889999999999999999999999886
No 170
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5.5e-36 Score=303.49 Aligned_cols=245 Identities=31% Similarity=0.434 Sum_probs=197.7
Q ss_pred cccCcCCeEEEEEEEEcC----CcEEEEEEcccCCcch-HHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLDD----GSVVAVKRLKDASIGG-KREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|.... +..||+|.++...... .+.+.+|++.+..++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999653 7899999998654433 67899999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 441 GSLFWLLHGNRGP----GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 441 g~L~~~l~~~~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
++|.+++...... ....+++..++.++.|+++||+||| +.+++||||||+||++++++.+||+|||.+....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA----SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH----cCCcccCccCcceEEECCCCcEEEcccccccccc
Confidence 9999999865210 1256899999999999999999999 8899999999999999999999999999998765
Q ss_pred CC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 517 PS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 517 ~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
.. ...++..|+|||.+. ...++.++||||+|+++|||++ |+.||.... ..+.......
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------------~~~~~~~~~~ 222 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLK--DGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS------------NEEVLEYLRK 222 (262)
T ss_pred cccccccccCCCcCccccCHHHhc--cCCcchhhccHHHHHHHHHHHhcCCCCCCCCC------------HHHHHHHHHc
Confidence 43 234567899999664 4478999999999999999999 699986431 1222222221
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
.. . . ........++.+++.+||+.+|.+|||+.|+++.|+
T Consensus 223 ~~-~-------~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 223 GY-R-------L---PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CC-C-------C---CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 10 0 0 001122356888999999999999999999998873
No 171
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.6e-36 Score=318.25 Aligned_cols=239 Identities=23% Similarity=0.342 Sum_probs=187.9
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999954 578999999975432 2345678899998888 699999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|..++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH----~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 151 (327)
T cd05617 81 GDLMFHMQRQ-----RKLPEEHARFYAAEICIALNFLH----ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD 151 (327)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC
Confidence 9999988644 34899999999999999999999 78999999999999999999999999999875321
Q ss_pred --CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 518 --STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 518 --~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
....+|..|+|||++. +..++.++|||||||++|||++|+.||....... .....++..........
T Consensus 152 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~--- 220 (327)
T cd05617 152 TTSTFCGTPNYIAPEILR--GEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNP------DMNTEDYLFQVILEKPI--- 220 (327)
T ss_pred ceecccCCcccCCHHHHC--CCCCCchheeehhHHHHHHHHhCCCCCCccCCCc------ccccHHHHHHHHHhCCC---
Confidence 1456789999999764 5678899999999999999999999996432211 11222333322222110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMS 632 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 632 (672)
..... ....+.+++.+||+.||++||++.
T Consensus 221 -----~~p~~---~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 221 -----RIPRF---LSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred -----CCCCC---CCHHHHHHHHHHhccCHHHcCCCC
Confidence 00111 123466788899999999999853
No 172
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.9e-36 Score=307.23 Aligned_cols=247 Identities=25% Similarity=0.365 Sum_probs=193.5
Q ss_pred HhcccCcCCeEEEEEEEEcC------CcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVLDD------GSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
+.+.||+|+||.||+|...+ +..||+|.+..... .....|.+|+.++++++|+||+++++++.+.+..++|||
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 89 (277)
T cd05036 10 LLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLE 89 (277)
T ss_pred eeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEe
Confidence 34789999999999999653 57899998875432 245678999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC---cEEEeccCC
Q 005880 437 YMPNGSLFWLLHGNRG--PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG---NARVSDFGL 511 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~---~~kl~DfG~ 511 (672)
|+++|+|.++++.... .....+++..+++++.|+++||+||| +.+++||||||+||+++.++ .+||+|||+
T Consensus 90 ~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~ 165 (277)
T cd05036 90 LMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE----ENHFIHRDIAARNCLLTCKGPGRVAKIADFGM 165 (277)
T ss_pred cCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccchheEEEeccCCCcceEeccCcc
Confidence 9999999999976542 11235899999999999999999999 78999999999999998654 599999999
Q ss_pred CccCCCCC-------CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHH
Q 005880 512 SIFAPPST-------VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWV 583 (672)
Q Consensus 512 a~~~~~~~-------~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~ 583 (672)
++...... ...+..|+|||++. +..++.++|||||||++|||++ |+.||.... ..+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DiwslG~il~el~~~g~~pf~~~~------------~~~~~ 231 (277)
T cd05036 166 ARDIYRASYYRKGGRAMLPIKWMPPEAFL--DGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT------------NQEVM 231 (277)
T ss_pred ccccCCccceecCCCCCccHhhCCHHHHh--cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC------------HHHHH
Confidence 98663321 12235799999764 4678999999999999999997 999986432 11222
Q ss_pred HHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
......... ... ......+.+++.+|++.+|++||++.+|++.|+
T Consensus 232 ~~~~~~~~~--------~~~---~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 232 EFVTGGGRL--------DPP---KGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHcCCcC--------CCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 221111100 000 112346788899999999999999999999886
No 173
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.9e-36 Score=311.12 Aligned_cols=248 Identities=25% Similarity=0.363 Sum_probs=195.8
Q ss_pred HHhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCc-chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEE
Q 005880 363 ASAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASI-GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLV 434 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 434 (672)
...+.||+|+||.||+|... .+..||||+++.... ...+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 38 ~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 117 (302)
T cd05055 38 SFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVI 117 (302)
T ss_pred EEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEE
Confidence 45678999999999999742 345799999875432 2356789999999999 799999999999999999999
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
|||+++|+|.++++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||+++.
T Consensus 118 ~e~~~~~~L~~~i~~~~~---~~l~~~~~~~i~~~i~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 118 TEYCCYGDLLNFLRRKRE---SFLTLEDLLSFSYQVAKGMAFLA----SKNCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred EEcCCCCcHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHH----HCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence 999999999999975432 33899999999999999999999 78999999999999999999999999999975
Q ss_pred CCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 515 APPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 515 ~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
.... ...++..|+|||.+. +..++.++|||||||++|||++ |+.||...... .-....
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~------------~~~~~~ 256 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIF--NCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD------------SKFYKL 256 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhc--cCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch------------HHHHHH
Confidence 5432 123456799999664 4568899999999999999998 99998643211 111111
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
....... .... .....+.+++.+|++.+|++|||+.|+++.|+++
T Consensus 257 ~~~~~~~-------~~~~---~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 257 IKEGYRM-------AQPE---HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHcCCcC-------CCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1111100 0001 1124578888999999999999999999999874
No 174
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=8.6e-37 Score=325.10 Aligned_cols=244 Identities=23% Similarity=0.318 Sum_probs=189.8
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
..+.||+|+||.||+++.. +++.||+|.+.+.. ....+.+.+|+.+++.++||||+++++++.+++..++||||++
T Consensus 47 ~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~ 126 (370)
T cd05621 47 VVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMP 126 (370)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCC
Confidence 4578999999999999965 58899999986422 2234568899999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||++......
T Consensus 127 gg~L~~~l~~~------~~~~~~~~~~~~qil~aL~~LH----~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 127 GGDLVNLMSNY------DVPEKWAKFYTAEVVLALDAIH----SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred CCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 99999999643 3788999999999999999999 889999999999999999999999999999765432
Q ss_pred -----CCCCCCcccCCCccccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 519 -----TVPRSNGYRAPELSSSDG--RKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~~--~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
...+|..|+|||++.... ..++.++||||+||++|||++|+.||.... .......+.....
T Consensus 197 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~------------~~~~~~~i~~~~~ 264 (370)
T cd05621 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS------------LVGTYSKIMDHKN 264 (370)
T ss_pred ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC------------HHHHHHHHHhCCc
Confidence 445889999999875432 347889999999999999999999996432 1222222222111
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCCCC--CCCCHHHHHHH
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPD--QRPNMSHVVKL 637 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~--~RPt~~evl~~ 637 (672)
... .+........+.+++..|+..++. .||++.|+++.
T Consensus 265 ~~~--------~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 265 SLN--------FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ccC--------CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 000 011011223456677788875554 38899998764
No 175
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.3e-36 Score=306.27 Aligned_cols=247 Identities=23% Similarity=0.382 Sum_probs=193.7
Q ss_pred hcccCcCCeEEEEEEEE-cCCc----EEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGS----VVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.++||+|+||.||+|.+ .+|. .||+|.++... ....+++.+|+.++..++||||+++++++.. ...++++||+
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~ 90 (279)
T cd05109 12 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLM 90 (279)
T ss_pred eeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcC
Confidence 47899999999999984 3454 48999987543 2345678899999999999999999999875 4567999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.++++... ..+++..++.++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 91 ~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~lH----~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 91 PYGCLLDYVRENK----DRIGSQDLLNWCVQIAKGMSYLE----EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred CCCCHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 9999999997543 35899999999999999999999 889999999999999999999999999999766432
Q ss_pred -------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 519 -------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 519 -------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
...++..|+|||.+. +..++.++|||||||++|||++ |..||..... ..+..++ ...
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~--~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---------~~~~~~~----~~~ 227 (279)
T cd05109 163 ETEYHADGGKVPIKWMALESIL--HRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA---------REIPDLL----EKG 227 (279)
T ss_pred cceeecCCCccchhhCCHHHhc--cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---------HHHHHHH----HCC
Confidence 122345799999654 5578999999999999999998 8999854221 1111111 111
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCC
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVE 645 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 645 (672)
... .........+.+++.+||+.||++||++.|+++.|+.+.+..
T Consensus 228 ~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 228 ERL----------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred CcC----------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 000 000122346788899999999999999999999998876443
No 176
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.6e-36 Score=325.12 Aligned_cols=242 Identities=21% Similarity=0.304 Sum_probs=187.0
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+. .+++.||||+++.... .....+.+|++++.+++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~g 85 (381)
T cd05626 6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 85 (381)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCC
Confidence 47899999999999995 4689999999975332 2345788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++++||+|||+++....
T Consensus 86 g~L~~~l~~~~-----~~~e~~~~~~~~qi~~aL~~LH----~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 86 GDMMSLLIRME-----VFPEVLARFYIAELTLAIESVH----KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 99999997543 4889999999999999999999 78999999999999999999999999999753210
Q ss_pred -------------------------------------------------CCCCCCCcccCCCccccCCCCCCchhHHHHH
Q 005880 518 -------------------------------------------------STVPRSNGYRAPELSSSDGRKQSQKSDVYSF 548 (672)
Q Consensus 518 -------------------------------------------------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~ 548 (672)
....||..|+|||++. +..++.++|||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~~~DiwSl 234 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLL--RKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHc--CCCCCCccceeeh
Confidence 1235788999999764 4568899999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHh--ccCCCCC
Q 005880 549 GVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMA--CTSASPD 626 (672)
Q Consensus 549 Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~--Cl~~dP~ 626 (672)
||++|||+||+.||...... ........... .. ......... .++.+++.+ |+..+|.
T Consensus 235 G~il~elltG~~Pf~~~~~~------------~~~~~i~~~~~--~~---~~~~~~~~s---~~~~dli~~ll~~~~~~~ 294 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPT------------ETQLKVINWEN--TL---HIPPQVKLS---PEAVDLITKLCCSAEERL 294 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHH------------HHHHHHHcccc--cc---CCCCCCCCC---HHHHHHHHHHccCccccc
Confidence 99999999999999643211 11111111000 00 000111112 234555655 6677777
Q ss_pred CCCCHHHHHHH
Q 005880 627 QRPNMSHVVKL 637 (672)
Q Consensus 627 ~RPt~~evl~~ 637 (672)
.||++.|+++.
T Consensus 295 ~R~~~~~~l~h 305 (381)
T cd05626 295 GRNGADDIKAH 305 (381)
T ss_pred CCCCHHHHhcC
Confidence 89999999763
No 177
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6.1e-37 Score=325.03 Aligned_cols=241 Identities=24% Similarity=0.349 Sum_probs=193.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +|+.||||+++... ......+.+|++++..++||||+++++++.+++..++||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPG 85 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCC
Confidence 478999999999999965 68999999987532 13456788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH----~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 86 GDLMNLLIRK-----DVFPEETARFYIAELVLALDSVH----KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 9999999754 34899999999999999999999 789999999999999999999999999998755432
Q ss_pred --------------------------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 005880 519 --------------------------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDG 566 (672)
Q Consensus 519 --------------------------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~ 566 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLR--GTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHc--CCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 235788999999765 4578999999999999999999999996432
Q ss_pred CCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHH
Q 005880 567 GGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPN-MSHVVKL 637 (672)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-~~evl~~ 637 (672)
.......+.... ... ..... ......+.+++.+|+. ||.+||+ +.|+++.
T Consensus 235 ------------~~~~~~~i~~~~--~~~---~~p~~---~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 235 ------------LQETYNKIINWK--ESL---RFPPD---PPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred ------------HHHHHHHHhccC--Ccc---cCCCC---CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 111122221100 000 00000 1123457788889997 9999999 9999863
No 178
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=5.3e-36 Score=305.37 Aligned_cols=242 Identities=24% Similarity=0.354 Sum_probs=191.6
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
..||+|+||.||+|+.. ++..||+|.+........+.+.+|++++++++|+||+++++++..++..++|+||+++++|.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS 93 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence 47999999999999954 67889999988766556778999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-CCcEEEeccCCCccCCCC---
Q 005880 445 WLLHGNRGPGRTPL--DWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK-TGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 445 ~~l~~~~~~~~~~l--~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~-~~~~kl~DfG~a~~~~~~--- 518 (672)
+++.... .++ ++..+..++.|+++||+||| +.+|+||||||+||+++. ++.++|+|||++......
T Consensus 94 ~~l~~~~----~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 165 (268)
T cd06624 94 ALLRSKW----GPLKDNEQTIIFYTKQILEGLKYLH----DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPC 165 (268)
T ss_pred HHHHHhc----ccCCCcHHHHHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCc
Confidence 9997543 224 78889999999999999999 789999999999999986 679999999998755332
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++......++.++||||||+++|||++|+.||...... ....+.......
T Consensus 166 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~---------~~~~~~~~~~~~------- 229 (268)
T cd06624 166 TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP---------QAAMFKVGMFKI------- 229 (268)
T ss_pred cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh---------hhhHhhhhhhcc-------
Confidence 23467889999987544445789999999999999999999998642211 001110000000
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.+.. . .....++.+++.+||+.+|.+|||+.|+++
T Consensus 230 ~~~~--~---~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 230 HPEI--P---ESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CCCC--C---cccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 0000 0 112245778888999999999999999875
No 179
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=6.3e-36 Score=306.76 Aligned_cols=244 Identities=27% Similarity=0.420 Sum_probs=191.1
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccC-CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
..+.||+|+||.||+|+. .+++.||+|.+... .....+++.+|++++++++||||+++++++..++..++||||++++
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 84 (279)
T cd06619 5 YQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGG 84 (279)
T ss_pred heeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCC
Confidence 357899999999999995 56899999998644 2334567899999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|..+. .+++..+..++.|++.||+||| +.+|+|+||||+||+++.++.++|+|||++......
T Consensus 85 ~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~ 151 (279)
T cd06619 85 SLDVYR---------KIPEHVLGRIAVAVVKGLTYLW----SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAK 151 (279)
T ss_pred ChHHhh---------cCCHHHHHHHHHHHHHHHHHHH----HCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccccc
Confidence 996542 2678899999999999999999 889999999999999999999999999999765433
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||........ ......+......+. .+
T Consensus 152 ~~~~~~~y~aPE~~~--~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~~------~~ 218 (279)
T cd06619 152 TYVGTNAYMAPERIS--GEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQG-----SLMPLQLLQCIVDED------PP 218 (279)
T ss_pred CCCCChhhcCceeec--CCCCCCcchHHHHHHHHHHHHhCCCCchhhccccc-----ccchHHHHHHHhccC------CC
Confidence 446788999999764 45788999999999999999999999965322110 011111111111111 00
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
.... .....++.+++.+|++.+|++||+++|+++.
T Consensus 219 ~~~~----~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 219 VLPV----GQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCC----CcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000 1122357788889999999999999999753
No 180
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=319.42 Aligned_cols=240 Identities=29% Similarity=0.433 Sum_probs=198.3
Q ss_pred cccCcCCeEEEEEEE-EcCCcEEEEEEcccC---CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRLKDA---SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
..||.|+||.||-|+ ..+.+.||||++.-. +.....++.+|++.|.+++|||++.+-|+|..+...||||||| -|
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC-lG 110 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC-LG 110 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH-hc
Confidence 459999999999999 557899999998743 3335678999999999999999999999999999999999999 66
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-CC
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-TV 520 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~ 520 (672)
+-.+++.-.+ .++.+.++..|+.+.+.||+||| +++.||||||+.|||+++.|.+||+|||.|....+. ..
T Consensus 111 SAsDlleVhk----KplqEvEIAAi~~gaL~gLaYLH----S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsF 182 (948)
T KOG0577|consen 111 SASDLLEVHK----KPLQEVEIAAITHGALQGLAYLH----SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSF 182 (948)
T ss_pred cHHHHHHHHh----ccchHHHHHHHHHHHHHHHHHHH----HhhHHhhhccccceEecCCCeeeeccccchhhcCchhcc
Confidence 8888887654 57999999999999999999999 899999999999999999999999999999877765 78
Q ss_pred CCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchh
Q 005880 521 PRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLE 599 (672)
Q Consensus 521 ~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (672)
+||+.|||||++.. +.+.|+-|+||||+|++..||.-.++|....+.- ...+. +..++ .|.
T Consensus 183 vGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM-----------SALYH-IAQNe------sPt 244 (948)
T KOG0577|consen 183 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----------SALYH-IAQNE------SPT 244 (948)
T ss_pred cCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH-----------HHHHH-HHhcC------CCC
Confidence 99999999998753 5678999999999999999999999998654311 00000 00110 011
Q ss_pred hccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 600 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+. ..+....+.+++..||++-|.+|||..++++
T Consensus 245 Lq----s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 245 LQ----SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred CC----CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 11 1345556788888999999999999988764
No 181
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=6.5e-37 Score=321.17 Aligned_cols=237 Identities=23% Similarity=0.357 Sum_probs=185.8
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHH-HHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHME-VLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+.. +|+.||+|++.... ......+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 36899999999999954 68999999986432 123345555554 46779999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|..++... ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++....
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH----~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 151 (325)
T cd05604 81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLH----SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD 151 (325)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC
Confidence 9999888643 35899999999999999999999 78999999999999999999999999999875322
Q ss_pred --CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 518 --STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 518 --~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
....++..|+|||++. +..++.++|||||||++|||++|+.||.... ..+.........
T Consensus 152 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~il~el~~G~~pf~~~~------------~~~~~~~~~~~~----- 212 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIR--KQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD------------VAEMYDNILHKP----- 212 (325)
T ss_pred CcccccCChhhCCHHHHc--CCCCCCcCccccccceehhhhcCCCCCCCCC------------HHHHHHHHHcCC-----
Confidence 1345788999999764 5578899999999999999999999996432 222222222211
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
....+. ....+.+++.+|++.+|.+||++.+.++.
T Consensus 213 ----~~~~~~---~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 213 ----LVLRPG---ASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred ----ccCCCC---CCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 000111 22346678889999999999998644433
No 182
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.3e-36 Score=341.14 Aligned_cols=255 Identities=22% Similarity=0.296 Sum_probs=198.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.++||+|+||.||+|+.. +|+.||+|+++.... ...+++.+|++++++++||||+++++++.+++..++||||+++
T Consensus 7 i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eG 86 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEG 86 (932)
T ss_pred EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCC
Confidence 478999999999999965 589999999975322 2356789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCC------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 441 GSLFWLLHGNRG------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 441 g~L~~~l~~~~~------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
|+|.+++..... ......++..+++++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 87 GSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH----s~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~ 162 (932)
T PRK13184 87 YTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH----SKGVLHRDLKPDNILLGLFGEVVILDWGAAIF 162 (932)
T ss_pred CCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH----HCCccccCCchheEEEcCCCCEEEEecCccee
Confidence 999999864221 11234678889999999999999999 78999999999999999999999999999976
Q ss_pred CCC-----------------------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 005880 515 APP-----------------------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGM 571 (672)
Q Consensus 515 ~~~-----------------------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~ 571 (672)
... ....||..|+|||++. +..++.++|||||||++|||+||+.||.......
T Consensus 163 i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~--g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k-- 238 (932)
T PRK13184 163 KKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLL--GVPASESTDIYALGVILYQMLTLSFPYRRKKGRK-- 238 (932)
T ss_pred cccccccccccccccccccccccccCCCCCCCCCCCCHHHhc--CCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh--
Confidence 511 1235788999999654 5678999999999999999999999996532111
Q ss_pred CCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHHhcCCC
Q 005880 572 GCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-NMSHVVKLIEELRGVEV 646 (672)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-t~~evl~~L~~i~~~~~ 646 (672)
.. ... ...++... ....+....+.+++.+|++.||++|| +++++++.|+...+...
T Consensus 239 -------i~-------~~~---~i~~P~~~--~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p 295 (932)
T PRK13184 239 -------IS-------YRD---VILSPIEV--APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSP 295 (932)
T ss_pred -------hh-------hhh---hccChhhc--cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCc
Confidence 00 000 00010000 00012234577888899999999996 67888888888765433
No 183
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.4e-36 Score=310.19 Aligned_cols=248 Identities=24% Similarity=0.361 Sum_probs=195.5
Q ss_pred HhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
..+.||+|+||.||+|... ++..||+|.+..... ....++.+|++++++++||||+++++++.+++..++|||
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 88 (288)
T cd05050 9 YVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFE 88 (288)
T ss_pred ecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEe
Confidence 3478999999999999853 467899999875432 345679999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcCCC-----------------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC
Q 005880 437 YMPNGSLFWLLHGNRG-----------------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~-----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~ 499 (672)
|+++|+|.+++..... .....+++..++.++.|++.||+||| +.+++||||||+||+++
T Consensus 89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH----~~~i~H~dl~p~nil~~ 164 (288)
T cd05050 89 YMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS----ERKFVHRDLATRNCLVG 164 (288)
T ss_pred cCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH----hCCeecccccHhheEec
Confidence 9999999999974321 11235789999999999999999999 78999999999999999
Q ss_pred CCCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCC
Q 005880 500 KTGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGM 571 (672)
Q Consensus 500 ~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~ 571 (672)
+++.++|+|||++...... ....+..|+|||.+. +..++.++|||||||++|||++ |..||...
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~el~~~~~~p~~~~------ 236 (288)
T cd05050 165 ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIF--YNRYTTESDVWAYGVVLWEIFSYGMQPYYGM------ 236 (288)
T ss_pred CCCceEECccccceecccCccccccCCCccChhhcCHHHHh--cCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------
Confidence 9999999999998754322 222345799999653 5678999999999999999998 88888532
Q ss_pred CCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 572 GCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
...++.......... . .......++.+++.+||+.||++|||+.|+++.|++
T Consensus 237 ------~~~~~~~~~~~~~~~---------~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 237 ------AHEEVIYYVRDGNVL---------S--CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ------CHHHHHHHHhcCCCC---------C--CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 222222222211110 0 001123467889999999999999999999999873
No 184
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=5.4e-36 Score=305.18 Aligned_cols=245 Identities=24% Similarity=0.435 Sum_probs=194.6
Q ss_pred HhcccCcCCeEEEEEEEEc-C---CcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVLD-D---GSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~---g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
+.+.||+|+||.||+|+.. + +..+|+|.++.... ...+.+.+|+.++.+++||||+++++++..++..++||||+
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (267)
T cd05066 8 IEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYM 87 (267)
T ss_pred eeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcC
Confidence 4578999999999999853 2 34799999875432 24568899999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++++|.+++.... ..+++.+++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 88 ~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH----~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 88 ENGSLDAFLRKHD----GQFTVIQLVGMLRGIASGMKYLS----DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred CCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 9999999997543 35899999999999999999999 889999999999999999999999999999765432
Q ss_pred C--------CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 519 T--------VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 ~--------~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
. ...+..|+|||.+. +..++.++||||||+++||+++ |+.||..... .+........
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~--~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~------------~~~~~~~~~~ 225 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN------------QDVIKAIEEG 225 (267)
T ss_pred cceeeecCCCccceeecCHhHhc--cCccCchhhhHHHHHHHHHHhcCCCCCcccCCH------------HHHHHHHhCC
Confidence 1 11234699999664 4578999999999999999886 9999864321 1111111111
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
.. .+........+.+++.+|++.+|.+||+|.++++.|+++
T Consensus 226 -~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 226 -YR----------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -Cc----------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 00 000111234577888899999999999999999999875
No 185
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=6.5e-36 Score=304.76 Aligned_cols=249 Identities=23% Similarity=0.293 Sum_probs=187.4
Q ss_pred ccCcCCeEEEEEEEEcCC---cEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 367 MLGKGGFGTAYKAVLDDG---SVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~~~~g---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.||+|+||.||+|...++ ..+++|.++... ....+.+.+|+.+++.++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999985443 356677765433 2356789999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC-----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP----- 517 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~----- 517 (672)
|.++++.... .....++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 82 L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH----~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 156 (268)
T cd05086 82 LKSYLSQEQW-HRRNSQLLLLQRMACEIAAGVTHMH----KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE 156 (268)
T ss_pred HHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHH----HCCeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence 9999976432 1234677888999999999999999 78999999999999999999999999999864321
Q ss_pred --CCCCCCCcccCCCccccC-----CCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 518 --STVPRSNGYRAPELSSSD-----GRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 518 --~~~~~t~~y~aPE~l~~~-----~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
....++..|+|||++... ...++.++|||||||++|||++ |..||... ...+.......+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~------------~~~~~~~~~~~~ 224 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHL------------SDREVLNHVIKD 224 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCC------------CHHHHHHHHHhh
Confidence 234567789999976421 2345789999999999999997 46677432 122233333322
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
.. ....++.... .....+.+++..|| .+|++||+++||++.|.
T Consensus 225 ~~-~~~~~~~~~~-----~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 225 QQ-VKLFKPQLEL-----PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cc-cccCCCccCC-----CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 21 2222222211 12234667778999 67999999999998873
No 186
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=6e-36 Score=305.34 Aligned_cols=247 Identities=24% Similarity=0.339 Sum_probs=195.0
Q ss_pred HhcccCcCCeEEEEEEEEcC----CcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVLDD----GSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
..+.||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++||||+++++++.+ +..++||||+
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~ 88 (270)
T cd05056 10 LGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELA 88 (270)
T ss_pred eeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcC
Confidence 45789999999999999643 2468999887544 3456689999999999999999999998865 5578999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH----~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 89 PLGELRSYLQVNK----YSLDLASLILYSYQLSTALAYLE----SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred CCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 9999999997543 35899999999999999999999 789999999999999999999999999998765433
Q ss_pred C------CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 519 T------VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 519 ~------~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
. ..++..|+|||.+. ...++.++||||||+++||+++ |+.||..... .+..........
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~------------~~~~~~~~~~~~ 226 (270)
T cd05056 161 SYYKASKGKLPIKWMAPESIN--FRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN------------NDVIGRIENGER 226 (270)
T ss_pred cceecCCCCccccccChhhhc--cCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH------------HHHHHHHHcCCc
Confidence 1 12235799999653 4578899999999999999996 9999964321 111111111110
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
. ... ......+.+++.+|+..+|.+|||+.++++.|+++...
T Consensus 227 ~--------~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 227 L--------PMP---PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred C--------CCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0 001 12234678888899999999999999999999998754
No 187
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=5.4e-36 Score=310.02 Aligned_cols=255 Identities=23% Similarity=0.352 Sum_probs=193.9
Q ss_pred HhcccCcCCeEEEEEEEEc-----------------CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-----------------DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYY 425 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-----------------~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 425 (672)
+.+.||+|+||.||++... ++..||+|.++... .....++.+|++++++++|+||+++++++
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~ 88 (296)
T cd05095 9 FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVC 88 (296)
T ss_pred eeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 4578999999999998632 24579999997543 33456899999999999999999999999
Q ss_pred EcCCeEEEEEeecCCCChhHHhhcCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC
Q 005880 426 FAREEKLLVSEYMPNGSLFWLLHGNRGP------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499 (672)
Q Consensus 426 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~ 499 (672)
...+..++||||+++|+|.+++...... ....+++.++..++.|++.||+||| +.+++||||||+||+++
T Consensus 89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH----~~~i~H~dlkp~Nili~ 164 (296)
T cd05095 89 ITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS----SLNFVHRDLATRNCLVG 164 (296)
T ss_pred ecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH----HCCeecccCChheEEEc
Confidence 9999999999999999999999764321 1235788999999999999999999 78999999999999999
Q ss_pred CCCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCCCCCC
Q 005880 500 KTGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT--GKCPSVIDGGGAG 570 (672)
Q Consensus 500 ~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t--g~~P~~~~~~~~~ 570 (672)
+++.++|+|||+++..... ....+..|+|||... +..++.++|||||||++|||++ |..||......
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~-- 240 (296)
T cd05095 165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL--LGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE-- 240 (296)
T ss_pred CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHh--cCCccchhhhhHHHHHHHHHHHhCCCCCccccChH--
Confidence 9999999999999765332 122245799999653 4578999999999999999998 67887533211
Q ss_pred CCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 571 MGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
................. ..+. .......+.+++.+||+.||.+||++.||++.|++
T Consensus 241 -------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 241 -------QVIENTGEFFRDQGRQV-YLPK------PALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred -------HHHHHHHHHHhhccccc-cCCC------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11111111111110000 0000 11123568889999999999999999999998863
No 188
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-37 Score=289.70 Aligned_cols=243 Identities=22% Similarity=0.372 Sum_probs=195.7
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc-----c---hHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEE
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI-----G---GKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLV 434 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-----~---~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 434 (672)
.+.||.|..+.|.++.. .+|..+|+|++..... . -.+.-.+|+.+|+++ .||+|+++.++|..+...++|
T Consensus 22 keilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlV 101 (411)
T KOG0599|consen 22 KEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLV 101 (411)
T ss_pred HHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhh
Confidence 46799999999999884 4688999998853211 1 123456799999998 699999999999999999999
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
+|.|+.|.|+++|... ..+++....+|+.|+.+|++||| ..+||||||||+|||+|++.++||+|||+++.
T Consensus 102 Fdl~prGELFDyLts~-----VtlSEK~tR~iMrqlfegVeylH----a~~IVHRDLKpENILlddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 102 FDLMPRGELFDYLTSK-----VTLSEKETRRIMRQLFEGVEYLH----ARNIVHRDLKPENILLDDNMNIKISDFGFACQ 172 (411)
T ss_pred hhhcccchHHHHhhhh-----eeecHHHHHHHHHHHHHHHHHHH----HhhhhhcccChhheeeccccceEEeccceeec
Confidence 9999999999999754 46999999999999999999999 88999999999999999999999999999998
Q ss_pred CCCC----CCCCCCcccCCCcccc----CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 515 APPS----TVPRSNGYRAPELSSS----DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 515 ~~~~----~~~~t~~y~aPE~l~~----~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
+.++ ..+||+||.|||.+.- ....|+..+|+||+|||+|.|+.|.+||.... -.-.++.+
T Consensus 173 l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk------------QmlMLR~I 240 (411)
T KOG0599|consen 173 LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK------------QMLMLRMI 240 (411)
T ss_pred cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH------------HHHHHHHH
Confidence 8876 6789999999997643 34568889999999999999999999995321 01111112
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... .- +.+...+......+||.+||+.||.+|.|++|+++
T Consensus 241 meGky-----qF---~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 241 MEGKY-----QF---RSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred Hhccc-----cc---CCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 22211 11 11223344455777888999999999999999985
No 189
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.4e-36 Score=330.43 Aligned_cols=258 Identities=22% Similarity=0.343 Sum_probs=185.2
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcC--------CeEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--------EEKLLV 434 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------~~~~lv 434 (672)
..+.||+|+||.||+|... +++.||||++.... ....+|+.+++.++||||+++++++... ...++|
T Consensus 70 ~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lv 145 (440)
T PTZ00036 70 LGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVV 145 (440)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEE
Confidence 3578999999999999964 68999999885432 2345799999999999999999987532 135689
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC-cEEEeccCCCc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG-NARVSDFGLSI 513 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~-~~kl~DfG~a~ 513 (672)
|||+++ +|.+++..... ....+++..+..++.|+++||+||| +.+|+||||||+|||++.++ .+||+|||+++
T Consensus 146 mE~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~gL~yLH----~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 146 MEFIPQ-TVHKYMKHYAR-NNHALPLFLVKLYSYQLCRALAYIH----SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EecCCc-cHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 999975 77777653221 2246899999999999999999999 88999999999999999664 79999999998
Q ss_pred cCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH---
Q 005880 514 FAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV--- 586 (672)
Q Consensus 514 ~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~--- 586 (672)
..... ...+|..|+|||++.. ...++.++|||||||++|||++|++||......+ .+...++..
T Consensus 220 ~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~--------~~~~i~~~~~~p 290 (440)
T PTZ00036 220 NLLAGQRSVSYICSRFYRAPELMLG-ATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD--------QLVRIIQVLGTP 290 (440)
T ss_pred hccCCCCcccCCCCcCccCHHHhcC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHHHHhCCC
Confidence 65432 3456889999997642 3468999999999999999999999997542211 011110000
Q ss_pred -------HhhhccccccchhhccccCh-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHHHHh
Q 005880 587 -------VREEWTAEVFDLELMRYKDI-----EEEMVGLLQVAMACTSASPDQRPNMSHVVK--LIEELR 642 (672)
Q Consensus 587 -------~~~~~~~~~~d~~~~~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~--~L~~i~ 642 (672)
.........+. .. ..... .....++.+++.+||..||.+|||+.|+++ .++.+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~-~~-~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFP-DV-KPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred CHHHHHHhchhhhcccCC-cc-CchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 00000000000 00 00000 012246788899999999999999999983 344443
No 190
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=7.3e-37 Score=326.16 Aligned_cols=240 Identities=22% Similarity=0.315 Sum_probs=188.9
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +|+.||||+++... ......+.+|++++..++||||+++++++.+++..++||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~ 85 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPG 85 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCC
Confidence 478999999999999965 68999999997532 22345678899999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 86 g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 86 GDMMTLLMKK-----DTFTEEETRFYIAETILAIDSIH----KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred cHHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence 9999999754 24899999999999999999999 889999999999999999999999999998643211
Q ss_pred -----------------------------------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh
Q 005880 519 -----------------------------------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557 (672)
Q Consensus 519 -----------------------------------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t 557 (672)
...||..|+|||++. ...++.++|||||||++|||++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFL--QTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHc--CCCCCCeeeeecchhHHHHhhc
Confidence 134788999999764 4578899999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCC---HHHH
Q 005880 558 GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPN---MSHV 634 (672)
Q Consensus 558 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt---~~ev 634 (672)
|+.||.... ..+.............. + ..... ...+.+++.+|+. +|.+|++ +.|+
T Consensus 235 G~~Pf~~~~------------~~~~~~~i~~~~~~~~~--~---~~~~~---s~~~~~li~~ll~-~p~~R~~~~~~~~l 293 (364)
T cd05599 235 GYPPFCSDN------------PQETYRKIINWKETLQF--P---DEVPL---SPEAKDLIKRLCC-EAERRLGNNGVNEI 293 (364)
T ss_pred CCCCCCCCC------------HHHHHHHHHcCCCccCC--C---CCCCC---CHHHHHHHHHHcc-CHhhcCCCCCHHHH
Confidence 999996432 11122222111100000 0 00011 2345677778886 9999998 8888
Q ss_pred HH
Q 005880 635 VK 636 (672)
Q Consensus 635 l~ 636 (672)
++
T Consensus 294 l~ 295 (364)
T cd05599 294 KS 295 (364)
T ss_pred hc
Confidence 76
No 191
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.1e-36 Score=319.30 Aligned_cols=236 Identities=24% Similarity=0.345 Sum_probs=184.2
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHH-HHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHM-EVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+.. +++.||+|++..... .....+..|. .+++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36899999999999965 578899999874321 1223444444 456788999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|.+++.... .+.+.....++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH----~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~ 151 (325)
T cd05602 81 GELFYHLQRER-----CFLEPRARFYAAEIASALGYLH----SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG 151 (325)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC
Confidence 99999997542 4778888999999999999999 88999999999999999999999999999875322
Q ss_pred --CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 518 --STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 518 --~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
....+|..|+|||++. +..++.++|||||||++|||++|+.||.... ..+.........
T Consensus 152 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~------------~~~~~~~i~~~~----- 212 (325)
T cd05602 152 TTSTFCGTPEYLAPEVLH--KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN------------TAEMYDNILNKP----- 212 (325)
T ss_pred CcccccCCccccCHHHHc--CCCCCCccccccccHHHHHHhcCCCCCCCCC------------HHHHHHHHHhCC-----
Confidence 1345789999999764 5678899999999999999999999996432 222222222211
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....+. ....+.+++.+|++.||.+||++.+.+.
T Consensus 213 ----~~~~~~---~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 213 ----LQLKPN---ITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred ----cCCCCC---CCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 000111 2234677888999999999999875443
No 192
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2e-36 Score=317.23 Aligned_cols=233 Identities=25% Similarity=0.315 Sum_probs=184.7
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCC-ceeeeEEEEEcCCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHP-NLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~~ 438 (672)
+.+.||+|+||.||+|+.. +++.||||+++... ....+.+..|.+++..++|+ +|+++++++.+.+..++||||+
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~ 83 (324)
T cd05587 4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 83 (324)
T ss_pred EEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCC
Confidence 3578999999999999965 57899999987532 22445678899999999765 6888999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC-
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP- 517 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~- 517 (672)
++|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 84 ~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 84 NGGDLMYHIQQV-----GKFKEPHAVFYAAEIAIGLFFLH----SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 999999998654 34889999999999999999999 78999999999999999999999999999864321
Q ss_pred ----CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 518 ----STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 518 ----~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
....+|..|+|||++. +..++.++|||||||++|||+||+.||.... ..+....+....
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslGvil~elltG~~pf~~~~------------~~~~~~~i~~~~--- 217 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQPPFDGED------------EDELFQSIMEHN--- 217 (324)
T ss_pred CCceeeecCCccccChhhhc--CCCCCcccchhhhHHHHHHHHhCCCCCCCCC------------HHHHHHHHHcCC---
Confidence 1345789999999764 4578899999999999999999999996432 112222222111
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM 631 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 631 (672)
...... ...++.+++.+||..||.+|++.
T Consensus 218 ------~~~~~~---~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 218 ------VSYPKS---LSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ------CCCCCC---CCHHHHHHHHHHhhcCHHHcCCC
Confidence 000111 12356788889999999999986
No 193
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.9e-36 Score=311.15 Aligned_cols=240 Identities=24% Similarity=0.392 Sum_probs=193.5
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
..+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++..++..++||||+++++
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (297)
T cd06656 23 RFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS 102 (297)
T ss_pred eeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCC
Confidence 347899999999999995 5789999999976555566778999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++... .+++.++..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 103 L~~~~~~~------~~~~~~~~~~~~~l~~~L~~LH----~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~ 172 (297)
T cd06656 103 LTDVVTET------CMDEGQIAAVCRECLQALDFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 172 (297)
T ss_pred HHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCc
Confidence 99998643 3789999999999999999999 789999999999999999999999999998765432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||.+. +..++.++|||||||++|+|++|+.||........ ........ .
T Consensus 173 ~~~~~~~~y~aPE~~~--~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~------------~~~~~~~~------~ 232 (297)
T cd06656 173 STMVGTPYWMAPEVVT--RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA------------LYLIATNG------T 232 (297)
T ss_pred CcccCCccccCHHHHc--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh------------eeeeccCC------C
Confidence 335677899999654 46778999999999999999999999965432110 00000000 0
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+.. .........+.+++.+||+.+|++||++.++++
T Consensus 233 ~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 233 PEL---QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCC---CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 001122234677888999999999999999986
No 194
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.2e-36 Score=311.34 Aligned_cols=253 Identities=25% Similarity=0.369 Sum_probs=197.6
Q ss_pred HHHhcccCcCCeEEEEEEEEc--------CCcEEEEEEcccCC-cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeE
Q 005880 362 RASAEMLGKGGFGTAYKAVLD--------DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEK 431 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 431 (672)
..+.+.||+|+||.||+|... ....||+|.++... .....++.+|++++.++ +||||+++++++..++..
T Consensus 14 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 93 (314)
T cd05099 14 LVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPL 93 (314)
T ss_pred eeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCce
Confidence 345688999999999999742 24579999987543 23456788999999999 699999999999998999
Q ss_pred EEEEeecCCCChhHHhhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC
Q 005880 432 LLVSEYMPNGSLFWLLHGNRG-----------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK 500 (672)
Q Consensus 432 ~lv~e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~ 500 (672)
++||||+++|+|.+++..... .....+++.++.+++.|++.||.||| +.+|+||||||+||++++
T Consensus 94 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH----~~gi~H~dlkp~Nill~~ 169 (314)
T cd05099 94 YVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE----SRRCIHRDLAARNVLVTE 169 (314)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH----HCCeeeccccceeEEEcC
Confidence 999999999999999975431 11245899999999999999999999 789999999999999999
Q ss_pred CCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 005880 501 TGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMG 572 (672)
Q Consensus 501 ~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~ 572 (672)
++.+||+|||+++..... ...++..|+|||++. +..++.++|||||||++|||++ |+.||...
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DiwslG~~l~el~~~g~~p~~~~------- 240 (314)
T cd05099 170 DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALF--DRVYTHQSDVWSFGILMWEIFTLGGSPYPGI------- 240 (314)
T ss_pred CCcEEEccccccccccccccccccccCCCCccccCHHHHc--cCCcCccchhhHHHHHHHHHHhCCCCCCCCC-------
Confidence 999999999999765432 112234699999764 4578899999999999999999 88888532
Q ss_pred CCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 573 CGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
...+..... ....... . ......++.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 241 -----~~~~~~~~~-~~~~~~~-------~---~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 241 -----PVEELFKLL-REGHRMD-------K---PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred -----CHHHHHHHH-HcCCCCC-------C---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 111222211 1111000 0 01123357788899999999999999999999999865
No 195
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.9e-36 Score=316.15 Aligned_cols=254 Identities=25% Similarity=0.337 Sum_probs=194.8
Q ss_pred HHHhcccCcCCeEEEEEEEE------cCCcEEEEEEcccCCc-chHHHHHHHHHHHcCC-CCCceeeeEEEEEcC-CeEE
Q 005880 362 RASAEMLGKGGFGTAYKAVL------DDGSVVAVKRLKDASI-GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAR-EEKL 432 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~~~~ 432 (672)
+.+.+.||+|+||.||+|.. .+++.||||+++.... .....+.+|++++.++ +||||+++++++... ...+
T Consensus 9 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~ 88 (343)
T cd05103 9 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 88 (343)
T ss_pred hcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceE
Confidence 35668899999999999973 3478999999975432 2345788999999999 689999999988654 4578
Q ss_pred EEEeecCCCChhHHhhcCCCC-----------------------------------------------------------
Q 005880 433 LVSEYMPNGSLFWLLHGNRGP----------------------------------------------------------- 453 (672)
Q Consensus 433 lv~e~~~~g~L~~~l~~~~~~----------------------------------------------------------- 453 (672)
+||||+++|+|.++++.....
T Consensus 89 lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (343)
T cd05103 89 VIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQ 168 (343)
T ss_pred EEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhh
Confidence 999999999999998753210
Q ss_pred ---CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-------CCCCC
Q 005880 454 ---GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-------TVPRS 523 (672)
Q Consensus 454 ---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-------~~~~t 523 (672)
....+++..+.+++.|+++||+||| +.+|+||||||+||++++++.+||+|||++...... ...++
T Consensus 169 ~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd05103 169 EDLYKKVLTLEDLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 244 (343)
T ss_pred hhhhhccCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCC
Confidence 0124788999999999999999999 889999999999999999999999999998764322 22334
Q ss_pred CcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhcc
Q 005880 524 NGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMR 602 (672)
Q Consensus 524 ~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (672)
..|+|||++. +..++.++||||||+++|||++ |..||..... .........+..... .
T Consensus 245 ~~y~aPE~~~--~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------------~~~~~~~~~~~~~~~-------~ 303 (343)
T cd05103 245 LKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI------------DEEFCRRLKEGTRMR-------A 303 (343)
T ss_pred cceECcHHhc--CCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc------------cHHHHHHHhccCCCC-------C
Confidence 5799999764 4578899999999999999997 8999854211 011111111111100 0
Q ss_pred ccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 603 YKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 603 ~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.. ....++.+++..||+.||++|||+.||++.|+.+.+
T Consensus 304 ~~---~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 304 PD---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 00 112357888999999999999999999999999865
No 196
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1e-35 Score=303.96 Aligned_cols=243 Identities=23% Similarity=0.355 Sum_probs=189.8
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcC------CeEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAR------EEKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~------~~~~lv~ 435 (672)
..+.||+|+||.||+|... +++.||+|++.... .....+.+|+.++.++ +|+||+++++++... ...++||
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~ 88 (272)
T cd06637 10 LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVM 88 (272)
T ss_pred HHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEE
Confidence 4567999999999999954 58899999986543 2456788999999998 799999999998753 4578999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+++|+|.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+||++++++.++|+|||++...
T Consensus 89 e~~~~~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~LH----~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 89 EFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLH----QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred EcCCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 9999999999997643 245899999999999999999999 789999999999999999999999999998765
Q ss_pred CCC-----CCCCCCcccCCCccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 516 PPS-----TVPRSNGYRAPELSSSD---GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 516 ~~~-----~~~~t~~y~aPE~l~~~---~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
... ...++..|+|||++... ...++.++|||||||++|||++|+.||..... ...+. ..
T Consensus 162 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~-----------~~~~~-~~- 228 (272)
T cd06637 162 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-----------MRALF-LI- 228 (272)
T ss_pred ccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH-----------HHHHH-HH-
Confidence 432 34567789999987532 34678899999999999999999999853211 11111 00
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.... ..... . ......+.+++.+||..+|.+|||+.|+++
T Consensus 229 ~~~~-----~~~~~-~---~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 229 PRNP-----APRLK-S---KKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred hcCC-----CCCCC-C---CCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0000 00000 0 112235778888999999999999999974
No 197
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.1e-35 Score=299.72 Aligned_cols=241 Identities=27% Similarity=0.432 Sum_probs=194.2
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
++||+|+||.||++...+++.||+|.++..... ....+.+|++++++++|+||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 368999999999999777999999998765443 4578999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC------
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS------ 518 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~------ 518 (672)
+++.... ..+++..+..++.+++.||+||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~l~~~~----~~~~~~~~~~~~~~~~~~l~~lH----~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (251)
T cd05041 81 TFLRKKK----NRLTVKKLLQMSLDAAAGMEYLE----SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD 152 (251)
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecc
Confidence 9997543 35789999999999999999999 789999999999999999999999999998765422
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
....+..|+|||.+. +..++.++|||||||++|||+| |..||..... ....... ....
T Consensus 153 ~~~~~~~~y~~PE~~~--~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~------------~~~~~~~-~~~~----- 212 (251)
T cd05041 153 GLKQIPIKWTAPEALN--YGRYTSESDVWSYGILLWETFSLGDTPYPGMSN------------QQTRERI-ESGY----- 212 (251)
T ss_pred ccCcceeccCChHhhc--cCCCCcchhHHHHHHHHHHHHhccCCCCccCCH------------HHHHHHH-hcCC-----
Confidence 112245699999654 4578899999999999999999 8888854321 1111111 1110
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
. ..........+.+++.+|++.+|.+|||+.||++.|+
T Consensus 213 --~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 213 --R---MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred --C---CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 0 0001122346888999999999999999999999886
No 198
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=8.3e-36 Score=304.12 Aligned_cols=245 Identities=25% Similarity=0.460 Sum_probs=194.3
Q ss_pred HhcccCcCCeEEEEEEEEc-CC---cEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DG---SVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
+.+.||+|+||.||+|... ++ ..||||.++... .....+|..|+.++++++||||+++++++.+++..++||||+
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 87 (269)
T cd05065 8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFM 87 (269)
T ss_pred EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecC
Confidence 4578999999999999964 33 369999987542 334568999999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.+++.... ..+++.+++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 88 ~~~~L~~~l~~~~----~~~~~~~~~~i~~~l~~al~~lH----~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 88 ENGALDSFLRQND----GQFTVIQLVGMLRGIAAGMKYLS----EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred CCCcHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 9999999997543 35899999999999999999999 789999999999999999999999999998755432
Q ss_pred C----C---C---CCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 519 T----V---P---RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 519 ~----~---~---~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
. . . .+..|+|||.+. +..++.++|||||||++||+++ |..||.... ..+......
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~--~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~------------~~~~~~~i~ 225 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMSYGERPYWDMS------------NQDVINAIE 225 (269)
T ss_pred ccccccccccCCCcceeecCHhHhc--cCcccchhhhhhhHHHHHHHhcCCCCCCCCCC------------HHHHHHHHH
Confidence 1 1 1 124699999654 5678899999999999999886 999986431 111111111
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
.. . .. +...+....+.+++.+||+.+|.+||++.+|+..|+++
T Consensus 226 ~~-~-------~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 226 QD-Y-------RL---PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cC-C-------cC---CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 0 00 01112334577889999999999999999999999875
No 199
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.8e-36 Score=322.38 Aligned_cols=263 Identities=21% Similarity=0.295 Sum_probs=190.3
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccC--CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC-----eEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDA--SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE-----EKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~ 435 (672)
..+.||+|+||.||+|.. .+|+.||||++... .....+++.+|+++++.++||||+++++++...+ ..++|+
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 83 (372)
T cd07853 4 PDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVT 83 (372)
T ss_pred ccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEe
Confidence 357899999999999995 47899999998653 2234567889999999999999999999998776 789999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+. ++|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 e~~~-~~l~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH----~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 84 ELMQ-SDLHKIIVSP-----QPLSSDHVKVFLYQILRGLKYLH----SAGILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred eccc-cCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9996 5888877543 35899999999999999999999 789999999999999999999999999999765
Q ss_pred CCC------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC----CCCCCChhHHHHH
Q 005880 516 PPS------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG----CGGAVDLPRWVQS 585 (672)
Q Consensus 516 ~~~------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~----~~~~~~~~~~~~~ 585 (672)
... ...++..|+|||++.. ...++.++|||||||++|||++|+.||.......... ..+......+...
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 232 (372)
T cd07853 154 EPDESKHMTQEVVTQYYRAPEILMG-SRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSA 232 (372)
T ss_pred ccCccccCCCCCcCCCcCCHHHHcC-CCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 432 2345778999997653 2457899999999999999999999997543211000 0000001000000
Q ss_pred H--Hhhhccccccchh-hc-cccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 586 V--VREEWTAEVFDLE-LM-RYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 586 ~--~~~~~~~~~~d~~-~~-~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
. ...........+. .. ..........++.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0 0000000000000 00 000001113457789999999999999999999863
No 200
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7.5e-36 Score=312.13 Aligned_cols=193 Identities=22% Similarity=0.399 Sum_probs=158.3
Q ss_pred hcccCcCCeEEEEEEEEc---CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEc--CCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD---DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA--REEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 439 (672)
+.+||+|+||.||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 357999999999999965 35789999987543 23567889999999999999999999864 456789999986
Q ss_pred CCChhHHhhcCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe----CCCCcEEEeccCC
Q 005880 440 NGSLFWLLHGNRG----PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL----DKTGNARVSDFGL 511 (672)
Q Consensus 440 ~g~L~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll----~~~~~~kl~DfG~ 511 (672)
++|.+++..... .....+++..+..++.|+++||.||| +.+|+||||||+||++ +.++.+||+|||+
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH----ANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH----hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 478777753221 12235899999999999999999999 7899999999999999 4667899999999
Q ss_pred CccCCCC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 512 SIFAPPS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 512 a~~~~~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
++..... ...+|..|+|||++.. ...++.++|||||||++|||+||++||...
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLG-ARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcC-CCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 9765432 2345788999997642 346789999999999999999999999754
No 201
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.7e-36 Score=317.45 Aligned_cols=232 Identities=27% Similarity=0.396 Sum_probs=182.7
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHH-HHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHME-VLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+.. +|+.||+|++..... .....+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999964 689999999864322 12334555554 67889999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|..++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 151 (321)
T cd05603 81 GELFFHLQRE-----RCFLEPRARFYAAEVASAIGYLH----SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE 151 (321)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC
Confidence 9999888643 34788999999999999999999 78999999999999999999999999999875322
Q ss_pred --CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 518 --STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 518 --~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
....++..|+|||++. +..++.++|||||||++|||++|+.||... +............
T Consensus 152 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~------------~~~~~~~~i~~~~----- 212 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLR--KEPYDRTVDWWCLGAVLYEMLYGLPPFYSR------------DVSQMYDNILHKP----- 212 (321)
T ss_pred ccccccCCcccCCHHHhc--CCCCCCcCcccccchhhhhhhcCCCCCCCC------------CHHHHHHHHhcCC-----
Confidence 1345788999999764 457889999999999999999999999643 2222222222211
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMS 632 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 632 (672)
..... .....+.+++.+||+.||.+||++.
T Consensus 213 ----~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 213 ----LQLPG---GKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred ----CCCCC---CCCHHHHHHHHHHccCCHhhcCCCC
Confidence 00011 1223577888899999999999864
No 202
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.7e-36 Score=309.16 Aligned_cols=239 Identities=24% Similarity=0.404 Sum_probs=193.1
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||.|++|.||+|.. .+|+.||+|.+........+.+.+|+++++.++||||+++++++...+..++|+||+++++|
T Consensus 24 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 103 (296)
T cd06655 24 YEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSL 103 (296)
T ss_pred EEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcH
Confidence 36799999999999984 57899999998765555667889999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++... .+++.++..++.|+++||+||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 104 ~~~~~~~------~l~~~~~~~i~~~l~~al~~LH----~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (296)
T cd06655 104 TDVVTET------CMDEAQIAAVCRECLQALEFLH----ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRS 173 (296)
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCC
Confidence 9998643 4899999999999999999999 889999999999999999999999999998765432
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...++..|+|||.+. +..++.++|||||||++|+|++|+.||..... ........... ...
T Consensus 174 ~~~~~~~y~aPE~~~--~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~------------~~~~~~~~~~~-~~~---- 234 (296)
T cd06655 174 TMVGTPYWMAPEVVT--RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP------------LRALYLIATNG-TPE---- 234 (296)
T ss_pred CcCCCccccCcchhc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------------HHHHHHHHhcC-Ccc----
Confidence 235677899999654 45688999999999999999999999964321 11111111110 000
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
... .......+.+++.+||..||++||++.++++
T Consensus 235 -~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 235 -LQN---PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -cCC---cccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 001 1112335778888999999999999999974
No 203
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.1e-35 Score=305.20 Aligned_cols=245 Identities=25% Similarity=0.383 Sum_probs=195.5
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.+.||+|+||.||+|... ++..||+|.+........+.+.+|++++++++||||+++++++..+...++||||++++
T Consensus 8 ~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (280)
T cd06611 8 EIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGG 87 (280)
T ss_pred HHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCC
Confidence 45677999999999999964 68999999987665556678999999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||++......
T Consensus 88 ~L~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh----~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 159 (280)
T cd06611 88 ALDSIMLELE----RGLTEPQIRYVCRQMLEALNFLH----SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK 159 (280)
T ss_pred cHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChhhEEECCCCCEEEccCccchhhcccccc
Confidence 9999987543 35899999999999999999999 789999999999999999999999999988654332
Q ss_pred --CCCCCCcccCCCcccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 519 --TVPRSNGYRAPELSSS---DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~---~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
...++..|+|||++.. ....++.++||||||+++|||++|+.||.... ..+..........
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~------------~~~~~~~~~~~~~-- 225 (280)
T cd06611 160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN------------PMRVLLKILKSEP-- 225 (280)
T ss_pred cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC------------HHHHHHHHhcCCC--
Confidence 2346788999997642 23457789999999999999999999986431 1111111111100
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+.... .......+.+++.+||+.+|.+||++.++++
T Consensus 226 ----~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 226 ----PTLDQ---PSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred ----CCcCC---cccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 00000 0112235778888999999999999999965
No 204
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.3e-36 Score=325.57 Aligned_cols=241 Identities=22% Similarity=0.316 Sum_probs=187.2
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||++.. .+|+.||||++.... ....+.+.+|++++.+++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~g 85 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPG 85 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCC
Confidence 47899999999999985 468999999986432 22345688899999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 g~L~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH----~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 86 GDLMTMLIKY-----DTFSEDVTRFYMAECVLAIEAVH----KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 9999999754 34889999999999999999999 889999999999999999999999999998632110
Q ss_pred --------------------------------------------------CCCCCCcccCCCccccCCCCCCchhHHHHH
Q 005880 519 --------------------------------------------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSF 548 (672)
Q Consensus 519 --------------------------------------------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~ 548 (672)
...||..|+|||++. +..++.++|||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSl 234 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFL--QQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHc--cCCCCCceeeEec
Confidence 135788999999764 4578999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCC
Q 005880 549 GVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQR 628 (672)
Q Consensus 549 Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~R 628 (672)
||++|||++|+.||..... .+....+..... ... .+........+.+++.+|+. +|.+|
T Consensus 235 Gvil~elltG~~Pf~~~~~------------~~~~~~i~~~~~--~~~------~p~~~~~s~~~~dli~~lL~-~~~~r 293 (377)
T cd05629 235 GAIMFECLIGWPPFCSENS------------HETYRKIINWRE--TLY------FPDDIHLSVEAEDLIRRLIT-NAENR 293 (377)
T ss_pred chhhhhhhcCCCCCCCCCH------------HHHHHHHHccCC--ccC------CCCCCCCCHHHHHHHHHHhc-CHhhc
Confidence 9999999999999964321 111222211100 000 01001112346677789997 77665
Q ss_pred ---CCHHHHHHH
Q 005880 629 ---PNMSHVVKL 637 (672)
Q Consensus 629 ---Pt~~evl~~ 637 (672)
+++.|+++.
T Consensus 294 ~~r~~~~~~l~h 305 (377)
T cd05629 294 LGRGGAHEIKSH 305 (377)
T ss_pred CCCCCHHHHhcC
Confidence 599988764
No 205
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=8.7e-36 Score=310.46 Aligned_cols=258 Identities=19% Similarity=0.299 Sum_probs=189.5
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|+.. +++.||+|.++.... .....+.+|++++++++||||+++++++..++..++||||+++ +
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 89 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-D 89 (309)
T ss_pred EEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-C
Confidence 478999999999999965 678999999874332 2345678899999999999999999999999999999999975 8
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~lH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 161 (309)
T cd07872 90 LKQYMDDCG----NIMSMHNVKIFLYQILRGLAYCH----RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY 161 (309)
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccc
Confidence 888876542 34789999999999999999999 789999999999999999999999999998754322
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCC----CCCCChhHHHHHHHhhhccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGC----GGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 593 (672)
...++..|+|||++.. ...++.++|||||||++|||+||+.||......+.... .+......| .......
T Consensus 162 ~~~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--- 236 (309)
T cd07872 162 SNEVVTLWYRPPDVLLG-SSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETW-PGISSND--- 236 (309)
T ss_pred ccccccccccCCHHHhC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH-hhhcchh---
Confidence 3346788999997643 35678999999999999999999999965432110000 000000000 0000000
Q ss_pred cccchhhccc------cChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMRY------KDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~------~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
...+...... ........++.+++.+||+.||.+|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000000000 000112235678888999999999999999975
No 206
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=7.2e-36 Score=310.83 Aligned_cols=190 Identities=25% Similarity=0.390 Sum_probs=165.2
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.+.||+|+||.||++... +|..+|+|.++... .....++.+|++++.+++||||+++++++..++..++||||++++
T Consensus 5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~ 84 (308)
T cd06615 5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 84 (308)
T ss_pred EEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCC
Confidence 3478999999999999954 68889999887542 223467889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS-LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
+|.++++.. ..+++..+..++.|+++||+||| + .+++||||||+||++++++.+||+|||++......
T Consensus 85 ~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH----~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (308)
T cd06615 85 SLDQVLKKA-----GRIPENILGKISIAVLRGLTYLR----EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 155 (308)
T ss_pred cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hhCCEEECCCChHHEEEecCCcEEEccCCCccccccccc
Confidence 999999754 34889999999999999999999 4 58999999999999999999999999998765432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||..
T Consensus 156 ~~~~~~~~~~aPE~~~--~~~~~~~~DiwslG~~l~~l~~g~~p~~~ 200 (308)
T cd06615 156 NSFVGTRSYMSPERLQ--GTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200 (308)
T ss_pred ccCCCCcCccChhHhc--CCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 445678999999753 55788999999999999999999999864
No 207
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=7.2e-36 Score=306.91 Aligned_cols=258 Identities=28% Similarity=0.414 Sum_probs=198.6
Q ss_pred HhcccCcCCeEEEEEEEEc-----CCcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEc--CCeEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-----DGSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFA--REEKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 435 (672)
..+.||+|+||.||+|.+. ++..||||.++..... ..++|.+|+++++.++|+||+++++++.. ....++||
T Consensus 8 ~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 87 (284)
T cd05038 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIM 87 (284)
T ss_pred hheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEE
Confidence 4478999999999999854 3689999999865443 46789999999999999999999999887 55789999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+++++|.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||.+...
T Consensus 88 e~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~l~~aL~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 88 EYLPSGSLRDYLQRHR----DQINLKRLLLFSSQICKGMDYLG----SQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred ecCCCCCHHHHHHhCc----cccCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 9999999999997543 35899999999999999999999 789999999999999999999999999999876
Q ss_pred CCC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCC--CCCCC-CChhHHHH
Q 005880 516 PPS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGM--GCGGA-VDLPRWVQ 584 (672)
Q Consensus 516 ~~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~--~~~~~-~~~~~~~~ 584 (672)
... ....+..|+|||.+. +..++.++||||||+++|||+||+.|+......... ..... .....+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~--~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLR--TSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHc--cCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 532 122345699999654 457889999999999999999999998643211100 00000 01111111
Q ss_pred HHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 585 SVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
...... ..........++.+++.+||+.+|++||||.||+++|+.++
T Consensus 238 -~~~~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 238 -LLKEGE----------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred -HHHcCC----------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 111110 00111122356889999999999999999999999999763
No 208
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-36 Score=313.30 Aligned_cols=240 Identities=26% Similarity=0.414 Sum_probs=198.6
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|.||.||+++.+ +|+.+|+|.+.+.... ....+.+|+++|+++. |||||.+++.|.+....++|||++.
T Consensus 40 ~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~ 119 (382)
T KOG0032|consen 40 GRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCE 119 (382)
T ss_pred hhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecC
Confidence 467999999999999965 5999999999865543 3468999999999998 9999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC----CCcEEEeccCCCccC
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK----TGNARVSDFGLSIFA 515 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~----~~~~kl~DfG~a~~~ 515 (672)
||.|.+.+... .+++.....++.|++.++.||| +.+|+||||||+|+|+.. ++.+|++|||++...
T Consensus 120 GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH----~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~ 189 (382)
T KOG0032|consen 120 GGELFDRIVKK------HYSERDAAGIIRQILEAVKYLH----SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI 189 (382)
T ss_pred CchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHH----hCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence 99999999754 2899999999999999999999 899999999999999963 257999999999887
Q ss_pred CCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 516 PPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 516 ~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
... ...||+.|+|||++. ...|+..+||||+||++|.|++|.+||..+.... -...+...++
T Consensus 190 ~~~~~~~~~~Gtp~y~APEvl~--~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~------------~~~~i~~~~~ 255 (382)
T KOG0032|consen 190 KPGERLHTIVGTPEYVAPEVLG--GRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE------------IFLAILRGDF 255 (382)
T ss_pred cCCceEeeecCCccccCchhhc--CCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH------------HHHHHHcCCC
Confidence 763 678999999999774 4689999999999999999999999998764321 1112222221
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+-....++. ......+++..|+..||.+|+|+.++++
T Consensus 256 -----~f~~~~w~~---is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 256 -----DFTSEPWDD---ISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred -----CCCCCCccc---cCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 111111222 3345667777999999999999999987
No 209
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.6e-35 Score=300.88 Aligned_cols=241 Identities=24% Similarity=0.331 Sum_probs=191.0
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcc-----hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIG-----GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
..+.||+|++|.||+|.. .+++.||+|.++..... ..+.+.+|++++++++||||+++++++.+++..++|+||
T Consensus 6 ~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 85 (263)
T cd06625 6 RGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEY 85 (263)
T ss_pred ccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEE
Confidence 357899999999999995 46899999998643211 235688999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||+|+||++++++.++|+|||+++....
T Consensus 86 ~~~~~l~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 86 MPGGSVKDQLKAY-----GALTETVTRKYTRQILEGVEYLH----SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred CCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 9999999998754 34889999999999999999999 88999999999999999999999999999875433
Q ss_pred C--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 518 S--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 518 ~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
. ...++..|+|||++. +..++.++||||||+++|||++|+.||..... ..-.......
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------------~~~~~~~~~~ 222 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVIS--GEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA------------MAAIFKIATQ 222 (263)
T ss_pred cccccccccCCCcCccccCcceec--cCCCCchhhhHHHHHHHHHHHhCCCCccccch------------HHHHHHHhcc
Confidence 1 234567899999765 45688999999999999999999999864211 1111111111
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
.... . ........+.+++.+||..+|.+|||+.|+++.
T Consensus 223 ~~~~-----~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 223 PTNP-----Q-----LPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCCC-----C-----CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 1000 0 001223457788889999999999999999863
No 210
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.3e-36 Score=315.49 Aligned_cols=232 Identities=25% Similarity=0.336 Sum_probs=184.5
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|+.. +++.||||++++... ...+.+..|..++..+ +|++|+++++++.+.+..++||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 84 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVN 84 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCC
Confidence 478999999999999965 578999999875322 2334566778888777 58999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
+|+|.+++... ..+++.++..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++....
T Consensus 85 ~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 85 GGDLMYQIQQV-----GRFKEPHAVFYAAEIAIGLFFLH----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 99999998654 24889999999999999999999 78999999999999999999999999999875432
Q ss_pred ---CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 518 ---STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 518 ---~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
....+|..|+|||++. +..++.++|||||||++|||+||+.||.... .......+.....
T Consensus 156 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlGvil~elltg~~Pf~~~~------------~~~~~~~i~~~~~--- 218 (323)
T cd05616 156 VTTKTFCGTPDYIAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQAPFEGED------------EDELFQSIMEHNV--- 218 (323)
T ss_pred CccccCCCChhhcCHHHhc--CCCCCCccchhchhHHHHHHHhCCCCCCCCC------------HHHHHHHHHhCCC---
Confidence 2455788999999765 4578999999999999999999999996432 1122222222110
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM 631 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 631 (672)
.... ....++.+++.+|++.||.+|++.
T Consensus 219 ------~~p~---~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 219 ------AYPK---SMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ------CCCC---cCCHHHHHHHHHHcccCHHhcCCC
Confidence 0011 122356788889999999999985
No 211
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.5e-36 Score=323.99 Aligned_cols=190 Identities=24% Similarity=0.372 Sum_probs=164.3
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+. .+++.||+|++..... .....+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~g 85 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPG 85 (382)
T ss_pred EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCC
Confidence 47899999999999995 4688999999875322 2345788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++.....
T Consensus 86 g~L~~~l~~~-----~~~~e~~~~~~~~qi~~al~~lH----~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 86 GDMMSLLIRM-----GIFPEDLARFYIAELTCAVESVH----KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 9999999754 24788999999999999999999 78999999999999999999999999999753210
Q ss_pred -------------------------------------------------CCCCCCCcccCCCccccCCCCCCchhHHHHH
Q 005880 518 -------------------------------------------------STVPRSNGYRAPELSSSDGRKQSQKSDVYSF 548 (672)
Q Consensus 518 -------------------------------------------------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~ 548 (672)
....||..|+|||++. +..++.++|||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~~~DiwSl 234 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLL--RTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhc--CCCCCCeeeEEec
Confidence 0135788999999775 4578899999999
Q ss_pred HHHHHHHHhCCCCCCCC
Q 005880 549 GVLLLELLTGKCPSVID 565 (672)
Q Consensus 549 Gvvl~el~tg~~P~~~~ 565 (672)
||++|||++|+.||...
T Consensus 235 Gvil~elltG~~Pf~~~ 251 (382)
T cd05625 235 GVILYEMLVGQPPFLAQ 251 (382)
T ss_pred hHHHHHHHhCCCCCCCC
Confidence 99999999999999643
No 212
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=9.4e-36 Score=301.14 Aligned_cols=240 Identities=26% Similarity=0.381 Sum_probs=193.5
Q ss_pred HhcccCcCCeEEEEEEEEcC-CcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
..+.||+|+||.||+|...+ ++.+|+|.++... ..+++.+|++++++++|+||+++++++..+...++++||+++++
T Consensus 7 ~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~ 84 (256)
T cd06612 7 ILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE--DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGS 84 (256)
T ss_pred hhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH--HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCc
Confidence 45679999999999999764 7899999987543 26789999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ..+++..+..++.|+++||.||| +.+++||||+|+||+++.++.+||+|||++......
T Consensus 85 L~~~l~~~~----~~l~~~~~~~~~~~l~~~l~~lh----~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~ 156 (256)
T cd06612 85 VSDIMKITN----KTLTEEEIAAILYQTLKGLEYLH----SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR 156 (256)
T ss_pred HHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccc
Confidence 999996533 45899999999999999999999 789999999999999999999999999998765443
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||....... -.... .... .
T Consensus 157 ~~~~~~~~y~~PE~~~--~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~------------~~~~~-~~~~-----~ 216 (256)
T cd06612 157 NTVIGTPFWMAPEVIQ--EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR------------AIFMI-PNKP-----P 216 (256)
T ss_pred ccccCCccccCHHHHh--cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh------------hhhhh-ccCC-----C
Confidence 234677899999764 4578899999999999999999999986432111 00000 0000 0
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
............+.+++.+||+.||++|||+.||++
T Consensus 217 ---~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 217 ---PTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred ---CCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 000111122345788889999999999999999975
No 213
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=9.1e-36 Score=302.24 Aligned_cols=243 Identities=26% Similarity=0.448 Sum_probs=194.2
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
..+.||+|+||.||+|...++..+|+|.++.... ..+.+.+|++++++++|+||+++++++.. ...+++|||+++|+|
T Consensus 10 ~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L 87 (260)
T cd05073 10 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSL 87 (260)
T ss_pred EEeEecCccceEEEEEEecCCccEEEEecCCChh-HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcH
Confidence 3578999999999999987788899998875432 45678999999999999999999999877 778999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++.... ...+++.++..++.|++.||.||| +.+++||||||+||+++.++.+||+|||.+......
T Consensus 88 ~~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH----~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (260)
T cd05073 88 LDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIE----QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 160 (260)
T ss_pred HHHHHhCC---ccccCHHHHHHHHHHHHHHHHHHH----hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc
Confidence 99997643 245889999999999999999999 789999999999999999999999999998765432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++. ...++.++|||||||++|+++| |+.||..... .+..... .......
T Consensus 161 ~~~~~~~~y~~PE~~~--~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~------------~~~~~~~-~~~~~~~-- 223 (260)
T cd05073 161 EGAKFPIKWTAPEAIN--FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN------------PEVIRAL-ERGYRMP-- 223 (260)
T ss_pred cCCcccccccCHhHhc--cCCcCccccchHHHHHHHHHHhcCCCCCCCCCH------------HHHHHHH-hCCCCCC--
Confidence 122345699999764 4578889999999999999999 8999864321 1111111 1111000
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
.......++.+++.+|++.+|++||++.++.+.|+.
T Consensus 224 --------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 --------RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred --------CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 011223467888899999999999999999999975
No 214
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-37 Score=324.16 Aligned_cols=247 Identities=25% Similarity=0.391 Sum_probs=200.4
Q ss_pred HHhcccCcCCeEEEEEEEE-cCC----cEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 363 ASAEMLGKGGFGTAYKAVL-DDG----SVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~-~~g----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
.-.++||+|+||+||+|.+ ..| -+||+|++.... .+...++.+|+-+|.+++|||+++++|+|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 3457899999999999994 344 468999987543 345788999999999999999999999998665 789999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
||+.|+|.++++.++ ..+.....+.|..|||+||.||| +.+++||||.++||||..-..+||.|||+++...
T Consensus 778 ~mP~G~LlDyvr~hr----~~igsq~lLnw~~QIAkgM~YLe----~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHR----DNIGSQDLLNWCYQIAKGMKYLE----EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred hcccchHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHH----hcchhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 999999999999765 46888999999999999999999 8899999999999999999999999999999887
Q ss_pred CCCC-C----C--CCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 517 PSTV-P----R--SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 517 ~~~~-~----~--t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
.... . + ...|||=|.+. ...++.++|||||||.+||++| |..|+++....+ + ...++
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~--~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e---------I----~dlle 914 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIR--IRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE---------I----PDLLE 914 (1177)
T ss_pred cccccccccccccCcHHHHHHHhh--ccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH---------h----hHHHh
Confidence 6521 1 1 23588888554 5789999999999999999998 888987543211 1 11222
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.+. +....+-+...+..++.+||..|+..||+++++...+.++.+
T Consensus 915 ~ge----------RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 915 KGE----------RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred ccc----------cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 110 112223355678889999999999999999999999988764
No 215
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.2e-36 Score=325.80 Aligned_cols=242 Identities=20% Similarity=0.285 Sum_probs=186.9
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
+.+.||+|+||.||+|+.. +++.||||++.+... .....+.+|++++.+++||||+++++.+.+++..++||||++
T Consensus 5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~ 84 (376)
T cd05598 5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 84 (376)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCC
Confidence 3578999999999999954 689999999864322 234568899999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
+|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 85 ~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH----~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 85 GGDMMSLLIRL-----GIFEEDLARFYIAELTCAIESVH----KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 99999999754 34788999999999999999999 88999999999999999999999999999742210
Q ss_pred ----------------------------------------------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHH
Q 005880 518 ----------------------------------------------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVL 551 (672)
Q Consensus 518 ----------------------------------------------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvv 551 (672)
....||..|+|||++. +..++.++|||||||+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlGvi 233 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL--RTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHc--CCCCCcceeeeeccce
Confidence 0235788999999764 4578899999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCC--
Q 005880 552 LLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-- 629 (672)
Q Consensus 552 l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-- 629 (672)
+|||++|+.||..... .+.......... ... ...... ....+.+++.+|+ .+|.+|+
T Consensus 234 lyell~G~~Pf~~~~~------------~~~~~~i~~~~~--~~~---~~~~~~---~s~~~~~li~~l~-~~p~~R~~~ 292 (376)
T cd05598 234 LYEMLVGQPPFLADTP------------AETQLKVINWET--TLH---IPSQAK---LSREASDLILRLC-CGAEDRLGK 292 (376)
T ss_pred eeehhhCCCCCCCCCH------------HHHHHHHhccCc--ccc---CCCCCC---CCHHHHHHHHHHh-cCHhhcCCC
Confidence 9999999999965321 112121111110 000 000011 1223555666765 5999999
Q ss_pred -CHHHHHHH
Q 005880 630 -NMSHVVKL 637 (672)
Q Consensus 630 -t~~evl~~ 637 (672)
++.|+++.
T Consensus 293 ~t~~ell~h 301 (376)
T cd05598 293 NGADEIKAH 301 (376)
T ss_pred CCHHHHhCC
Confidence 88888754
No 216
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=8.9e-36 Score=301.34 Aligned_cols=242 Identities=23% Similarity=0.342 Sum_probs=194.3
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccC-CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.+.||+|+||.||++... ++..+|+|.++.. .....+.+.+|+.++++++|+||+++++++.+.+..++||||+++|
T Consensus 4 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 83 (255)
T cd08219 4 VLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGG 83 (255)
T ss_pred EEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCC
Confidence 3578999999999999954 6899999998643 2334567889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++.... ...+++..++.++.|+++||.||| +.+|+|+||||+||++++++.++++|||.+......
T Consensus 84 ~l~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH----~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 156 (255)
T cd08219 84 DLMQKIKLQR---GKLFPEDTILQWFVQMCLGVQHIH----EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY 156 (255)
T ss_pred cHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCcceEEECCCCcEEEcccCcceeecccccc
Confidence 9999886543 235789999999999999999999 889999999999999999999999999998765432
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++. +..++.++||||||+++|+|++|+.||.... ............ ....
T Consensus 157 ~~~~~~~~~~~aPE~~~--~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~------------~~~~~~~~~~~~-~~~~- 220 (255)
T cd08219 157 ACTYVGTPYYVPPEIWE--NMPYNNKSDIWSLGCILYELCTLKHPFQANS------------WKNLILKVCQGS-YKPL- 220 (255)
T ss_pred cccccCCccccCHHHHc--cCCcCchhhhhhhchhheehhhccCCCCCCC------------HHHHHHHHhcCC-CCCC-
Confidence 345677899999764 4568899999999999999999999996431 122222221111 0000
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
.......+.+++.+||+.||++||++.|++..
T Consensus 221 ---------~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 ---------PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---------CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 01122357788889999999999999999864
No 217
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.3e-35 Score=302.56 Aligned_cols=247 Identities=23% Similarity=0.379 Sum_probs=196.0
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCc----EEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGS----VVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
.+.+.||+|+||.||+|... +|. .||+|.++.... ....++.+|+.++++++||||+++++++.. ...++|||
T Consensus 10 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 88 (279)
T cd05057 10 EKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQ 88 (279)
T ss_pred EEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEe
Confidence 34578999999999999954 343 589998875543 345678999999999999999999999987 78899999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|+++|+|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||.++...
T Consensus 89 ~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH----~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 89 LMPLGCLLDYVRNHK----DNIGSQYLLNWCVQIAKGMSYLE----EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred cCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH----hCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 999999999997653 34899999999999999999999 7899999999999999999999999999997654
Q ss_pred CCC-------CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 517 PST-------VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 517 ~~~-------~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
... ...+..|+|||.+. ...++.++||||||+++||+++ |+.||.... ..++......
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~--~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------------~~~~~~~~~~ 226 (279)
T cd05057 161 VDEKEYHAEGGKVPIKWMALESIL--HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP------------AVEIPDLLEK 226 (279)
T ss_pred CcccceecCCCcccccccCHHHhh--cCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC------------HHHHHHHHhC
Confidence 321 11245799999653 4578899999999999999999 999986432 2222222221
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
... . ... ......+.+++.+||..+|.+||++.++++.|+++.+
T Consensus 227 ~~~----~----~~~---~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 227 GER----L----PQP---PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCC----C----CCC---CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 110 0 000 1122357788889999999999999999999999854
No 218
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-35 Score=315.59 Aligned_cols=184 Identities=20% Similarity=0.331 Sum_probs=157.3
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.+.||+|+||.||+|+.. +++.||+|..... ....|+.++++++||||+++++++...+..++|+||+ .|
T Consensus 69 ~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~~ 141 (357)
T PHA03209 69 TVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY-SS 141 (357)
T ss_pred EEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc-CC
Confidence 34578999999999999965 5788999985433 2356899999999999999999999999999999999 56
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++.... .++++..+..|+.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 142 ~l~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 213 (357)
T PHA03209 142 DLYTYLTKRS----RPLPIDQALIIEKQILEGLRYLH----AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAF 213 (357)
T ss_pred cHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEEecCccccccccCccc
Confidence 8888886533 45899999999999999999999 789999999999999999999999999999754322
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSV 563 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~ 563 (672)
...+|..|+|||++. +..++.++|||||||++|||+++..|+.
T Consensus 214 ~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 214 LGLAGTVETNAPEVLA--RDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred ccccccccccCCeecC--CCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 345788999999764 4578999999999999999999766654
No 219
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.3e-35 Score=302.51 Aligned_cols=246 Identities=28% Similarity=0.446 Sum_probs=192.7
Q ss_pred cccCcCCeEEEEEEEEcC-------CcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 366 EMLGKGGFGTAYKAVLDD-------GSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
+.||+|+||.||+|+..+ +..+|+|.+.... .....++.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999999642 2579999886543 23466889999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC-----cEEEeccC
Q 005880 438 MPNGSLFWLLHGNRGP--GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG-----NARVSDFG 510 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~-----~~kl~DfG 510 (672)
+++|+|.+++...... ....+++.+++.++.|++.||+||| +.+++|+||||+||+++.++ .++|+|||
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE----QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH----hCCcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 9999999999754321 1234789999999999999999999 78999999999999999877 89999999
Q ss_pred CCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHH
Q 005880 511 LSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRW 582 (672)
Q Consensus 511 ~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~ 582 (672)
+++..... ....+..|+|||++. +..++.++|||||||++|||+| |+.||.... ..+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~------------~~~~ 222 (269)
T cd05044 157 LARDIYKSDYYRKEGEGLLPVRWMAPESLL--DGKFTTQSDVWSFGVLMWEILTLGQQPYPALN------------NQEV 222 (269)
T ss_pred cccccccccccccCcccCCCccccCHHHHc--cCCcccchhHHHHHHHHHHHHHcCCCCCcccC------------HHHH
Confidence 98755332 223356799999764 4578999999999999999998 999986332 1111
Q ss_pred HHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 583 VQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
........ ..... ......+.+++.+||+.+|.+||++.++++.|++
T Consensus 223 ~~~~~~~~--------~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 223 LQHVTAGG--------RLQKP---ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred HHHHhcCC--------ccCCc---ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11111110 00011 1223467788999999999999999999998863
No 220
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.2e-35 Score=304.34 Aligned_cols=240 Identities=26% Similarity=0.381 Sum_probs=192.9
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
...+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++..++..++||||+++
T Consensus 7 ~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (277)
T cd06642 7 TKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGG 86 (277)
T ss_pred HHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCC
Confidence 34577999999999999854 57899999987443 23456789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++.. ..+++..+..++.|+++||.||| +.+++|+||+|+||++++++.++|+|||++......
T Consensus 87 ~~L~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH----~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 87 GSALDLLKP------GPLEETYIATILREILKGLDYLH----SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHh----cCCeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence 999999864 24889999999999999999999 789999999999999999999999999998765443
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||.+. +..++.++|||||||++|||++|+.||...... .+... .....
T Consensus 157 ~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~------------~~~~~-~~~~~---- 217 (277)
T cd06642 157 KRNTFVGTPFWMAPEVIK--QSAYDFKADIWSLGITAIELAKGEPPNSDLHPM------------RVLFL-IPKNS---- 217 (277)
T ss_pred hhhcccCcccccCHHHhC--cCCCchhhhHHHHHHHHHHHHhCCCCCcccchh------------hHHhh-hhcCC----
Confidence 234677899999764 457889999999999999999999998643211 01111 11100
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
.+.. .......+.+++.+||+.+|++||++.++++.
T Consensus 218 -~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 218 -PPTL-----EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred -CCCC-----CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0000 01233457888999999999999999999973
No 221
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-35 Score=321.59 Aligned_cols=183 Identities=22% Similarity=0.297 Sum_probs=158.5
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||.||+|+.. .++.||||... ...+.+|++++++++|+|||++++++...+..++|||++ .++|
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~-~~~L 246 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY-RSDL 246 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc-CCCH
Confidence 467999999999999965 57899999643 234678999999999999999999999999999999999 5789
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++.... ..++|.+++.|+.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 247 ~~~l~~~~----~~l~~~~~~~i~~qi~~aL~yLH----~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 318 (461)
T PHA03211 247 YTYLGARL----RPLGLAQVTAVARQLLSAIDYIH----GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPF 318 (461)
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccccc
Confidence 88886432 35999999999999999999999 789999999999999999999999999999765332
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
...||..|+|||++. +..++.++|||||||++|||++|..|+..
T Consensus 319 ~~~~~GT~~Y~APE~~~--~~~~~~~sDvwSlGviL~El~~g~~~lf~ 364 (461)
T PHA03211 319 HYGIAGTVDTNAPEVLA--GDPYTPSVDIWSAGLVIFEAAVHTASLFS 364 (461)
T ss_pred ccccCCCcCCcCHHHHc--CCCCCchHHHHHHHHHHHHHHHcCCCccc
Confidence 245789999999764 56789999999999999999999877643
No 222
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.9e-36 Score=319.59 Aligned_cols=245 Identities=22% Similarity=0.300 Sum_probs=189.5
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
...+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..++||||+
T Consensus 46 ~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~ 125 (371)
T cd05622 46 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYM 125 (371)
T ss_pred EEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCC
Confidence 34578999999999999965 68899999986422 223456788999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.+++... .++...+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 126 ~gg~L~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 126 PGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred CCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH----HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC
Confidence 999999998643 3788889999999999999999 889999999999999999999999999999765432
Q ss_pred ------CCCCCCcccCCCccccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 519 ------TVPRSNGYRAPELSSSDG--RKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 519 ------~~~~t~~y~aPE~l~~~~--~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
...+|..|+|||++.... ..++.++|||||||++|||++|+.||.... .......+....
T Consensus 196 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~------------~~~~~~~i~~~~ 263 (371)
T cd05622 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------------LVGTYSKIMNHK 263 (371)
T ss_pred CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC------------HHHHHHHHHcCC
Confidence 345789999999875432 347899999999999999999999996432 222222222211
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQ--RPNMSHVVKL 637 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~~ 637 (672)
...... .. ......+.+++..|+..++.+ ||++.|+++.
T Consensus 264 ~~~~~~-----~~---~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 264 NSLTFP-----DD---NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CcccCC-----Cc---CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 111110 11 112334667778999844432 7788888774
No 223
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.1e-36 Score=339.48 Aligned_cols=249 Identities=19% Similarity=0.282 Sum_probs=191.5
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEc--CCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFA--REEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~ 438 (672)
+.+.||+|+||.||+|... ++..||+|.+.... ......|..|+.++.+++|||||++++++.+ ....|+||||+
T Consensus 17 Il~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~ 96 (1021)
T PTZ00266 17 VIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFC 96 (1021)
T ss_pred EEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCC
Confidence 3478999999999999954 57889999887432 2245678999999999999999999998865 35688999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC---CCCCcEecCCCCCCEEeCCC--------------
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC---KSLKLTHGNIKSTNVLLDKT-------------- 501 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---~~~~iiH~Dlkp~NIll~~~-------------- 501 (672)
++|+|.++|..... ....+++..++.|+.||+.||+|||... ...+||||||||+||||+.+
T Consensus 97 ~gGSL~~lL~k~~~-~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ 175 (1021)
T PTZ00266 97 DAGDLSRNIQKCYK-MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNL 175 (1021)
T ss_pred CCCcHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccccccc
Confidence 99999999975321 1245899999999999999999999421 01469999999999999642
Q ss_pred ---CcEEEeccCCCccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 005880 502 ---GNARVSDFGLSIFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCG 574 (672)
Q Consensus 502 ---~~~kl~DfG~a~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~ 574 (672)
+.+||+|||++...... ...+|+.|+|||++......++.++||||||||+|||+||+.||....
T Consensus 176 ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~-------- 247 (1021)
T PTZ00266 176 NGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN-------- 247 (1021)
T ss_pred CCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC--------
Confidence 34899999999765432 346789999999876555678999999999999999999999996421
Q ss_pred CCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 575 GAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.....+..+. ... ... .......+.+||..||..+|.+||++.|++.
T Consensus 248 ---~~~qli~~lk-~~p-------~lp----i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 248 ---NFSQLISELK-RGP-------DLP----IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred ---cHHHHHHHHh-cCC-------CCC----cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 2222222211 110 000 0112345778889999999999999999984
No 224
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.4e-35 Score=313.54 Aligned_cols=189 Identities=27% Similarity=0.362 Sum_probs=160.8
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcC------CeEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAR------EEKLLV 434 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv 434 (672)
..+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++... ...+++
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 98 (343)
T cd07878 19 NLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLV 98 (343)
T ss_pred hheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEE
Confidence 457899999999999995 4688999999875322 2345678899999999999999999887543 356899
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
+|++ +++|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++.
T Consensus 99 ~~~~-~~~l~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH----~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 167 (343)
T cd07878 99 TNLM-GADLNNIVKCQ------KLSDEHVQFLIYQLLRGLKYIH----SAGIIHRDLKPSNVAVNEDCELRILDFGLARQ 167 (343)
T ss_pred eecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH----HCCeecccCChhhEEECCCCCEEEcCCcccee
Confidence 9988 78998887532 4899999999999999999999 88999999999999999999999999999986
Q ss_pred CCCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 515 APPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 515 ~~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
.... ...++..|+|||++.. ...++.++|||||||++|||++|+.||..
T Consensus 168 ~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~ 218 (343)
T cd07878 168 ADDEMTGYVATRWYRAPEIMLN-WMHYNQTVDIWSVGCIMAELLKGKALFPG 218 (343)
T ss_pred cCCCcCCccccccccCchHhcC-CccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 6543 4567889999997643 24678999999999999999999999964
No 225
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.7e-35 Score=299.09 Aligned_cols=242 Identities=28% Similarity=0.457 Sum_probs=192.2
Q ss_pred HHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
++.+.||+|+||.||++.. +++.||+|.++... ....+.+|+.++++++||||+++++++..+ ..++||||+++|+
T Consensus 9 ~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~ 84 (254)
T cd05083 9 TLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGN 84 (254)
T ss_pred eeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCC
Confidence 3457899999999999975 57889999986543 346789999999999999999999998654 5789999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--CC
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--TV 520 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~ 520 (672)
|.+++.... ...+++..++.++.|+++||+||| +.+++||||||+||+++.++.+||+|||++...... ..
T Consensus 85 L~~~l~~~~---~~~~~~~~~~~~~~qi~~al~~lH----~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (254)
T cd05083 85 LVNFLRTRG---RALVSVIQLLQFSLDVAEGMEYLE----SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNS 157 (254)
T ss_pred HHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCC
Confidence 999997543 235889999999999999999999 789999999999999999999999999998764432 22
Q ss_pred CCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchh
Q 005880 521 PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLE 599 (672)
Q Consensus 521 ~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (672)
..+..|+|||.+. +..++.++|||||||++|||++ |+.||... ...++.....+. .. .+
T Consensus 158 ~~~~~y~~pe~~~--~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~------------~~~~~~~~~~~~-~~---~~-- 217 (254)
T cd05083 158 KLPVKWTAPEALK--HKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM------------SLKEVKECVEKG-YR---ME-- 217 (254)
T ss_pred CCCceecCHHHhc--cCCcCchhhHHHHHHHHHHHHhCCCCCCccC------------CHHHHHHHHhCC-CC---CC--
Confidence 3346799999654 4578899999999999999998 99998632 222222222111 10 00
Q ss_pred hccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 600 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
........+.+++.+||+.+|++||+++++++.|++
T Consensus 218 -----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 218 -----PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -----CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 011223467788899999999999999999998864
No 226
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.9e-35 Score=314.48 Aligned_cols=188 Identities=24% Similarity=0.335 Sum_probs=159.1
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccC--CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC------eEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA--SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE------EKLLV 434 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv 434 (672)
..+.||+|+||.||++... +|..||||++... .......+.+|+.+++.++||||+++++++...+ ..++|
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 104 (359)
T cd07876 25 QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLV 104 (359)
T ss_pred EEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEE
Confidence 3478999999999999954 6899999998643 2234567889999999999999999999986543 46899
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
|||+++ +|.+.++. .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH----~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~ 172 (359)
T cd07876 105 MELMDA-NLCQVIHM-------ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 172 (359)
T ss_pred EeCCCc-CHHHHHhc-------cCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEEecCCCccc
Confidence 999965 67666642 3788999999999999999999 88999999999999999999999999999976
Q ss_pred CCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 515 APPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 515 ~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
.... ...+|..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 173 ~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 173 ACTNFMMTPYVVTRYYRAPEVIL--GMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred cccCccCCCCcccCCCCCchhcc--CCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 5432 345688899999764 567889999999999999999999999753
No 227
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5.9e-35 Score=296.40 Aligned_cols=245 Identities=25% Similarity=0.390 Sum_probs=195.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++++||||+++++++.+.+..+++|||+++++|
T Consensus 8 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l 87 (262)
T cd06613 8 IQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSL 87 (262)
T ss_pred EEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcH
Confidence 467999999999999964 5789999999866555677899999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+......
T Consensus 88 ~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh----~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (262)
T cd06613 88 QDIYQVTR----GPLSELQIAYVCRETLKGLAYLH----ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK 159 (262)
T ss_pred HHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH----hCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccc
Confidence 99987542 35899999999999999999999 789999999999999999999999999998765432
Q ss_pred CCCCCCcccCCCccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 TVPRSNGYRAPELSSSD-GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~-~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||.+... ...++.++||||||+++|||+||+.||..... ..-........ +.
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~------------~~~~~~~~~~~-----~~ 222 (262)
T cd06613 160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP------------MRALFLISKSN-----FP 222 (262)
T ss_pred cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH------------HHHHHHHHhcc-----CC
Confidence 33567789999976422 12678899999999999999999999864321 11111111110 00
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+.. ..........+.+++.+||..+|.+|||+.+|+.
T Consensus 223 ~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 223 PPK--LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred Ccc--ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0111233456888999999999999999999974
No 228
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.5e-35 Score=303.10 Aligned_cols=256 Identities=24% Similarity=0.362 Sum_probs=199.2
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.+.||+|+||.||++... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||+++
T Consensus 8 ~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (284)
T cd06620 8 ETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDC 87 (284)
T ss_pred HHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCC
Confidence 45688999999999999954 68999999886433 33467889999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++... .++++..+..++.+++.||.|||+ .++++||||||+||++++++.++|+|||++......
T Consensus 88 ~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~---~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~ 159 (284)
T cd06620 88 GSLDRIYKKG-----GPIPVEILGKIAVAVVEGLTYLYN---VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA 159 (284)
T ss_pred CCHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHH---hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhcc
Confidence 9999998653 358999999999999999999993 258999999999999999999999999998654322
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||++. +..++.++|||||||++|||+||+.||........ ..........++.....+..
T Consensus 160 ~~~~~~~~~~aPE~~~--~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------ 230 (284)
T cd06620 160 DTFVGTSTYMSPERIQ--GGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDD-GQDDPMGILDLLQQIVQEPP------ 230 (284)
T ss_pred CccccCcccCCHHHHc--cCCCCccchHHHHHHHHHHHHhCCCCCcccchhhh-hhhhhhHHHHHHHHHhhccC------
Confidence 345788999999764 45788899999999999999999999975432210 00001112223332222210
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
.... ..+....+.+++.+|++.||++|||+.|+++..-
T Consensus 231 ---~~~~-~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 231 ---PRLP-SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred ---CCCC-chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 0000 0123346788899999999999999999998643
No 229
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=316.36 Aligned_cols=244 Identities=26% Similarity=0.362 Sum_probs=199.5
Q ss_pred HHhcccCcCCeEEEEEEEEcC--C--cEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 363 ASAEMLGKGGFGTAYKAVLDD--G--SVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
...++||+|.||.|++|.|.. | ..||||.++..... ...+|.+|+.+|.+|+|||++++||+..+ ....+|||.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 456789999999999999763 4 46899999876655 67899999999999999999999999887 677899999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
++.|+|.+.|+.. .+..+-......++.|||.|+.||. ..++|||||..+|+++-..-.+||+|||+.+.+..
T Consensus 192 aplGSLldrLrka---~~~~llv~~Lcdya~QiA~aM~YLe----skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 192 APLGSLLDRLRKA---KKAILLVSRLCDYAMQIAKAMQYLE----SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred cccchHHHHHhhc---cccceeHHHHHHHHHHHHHHHHHHh----hhhhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 9999999999873 2456888999999999999999999 88999999999999999988999999999987765
Q ss_pred CC--------CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 518 ST--------VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 518 ~~--------~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
.. ..-...|+|||.+. ...++.++|||+|||.+|||+| |..||.+-. -.+.++.
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLr--h~kFShaSDvWmyGVTiWEMFtyGEePW~G~~------------g~qIL~~--- 327 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLR--HRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR------------GIQILKN--- 327 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhc--cccccccchhhhhhhhHHhhhccCCCCCCCCC------------HHHHHHh---
Confidence 41 11235699999664 6799999999999999999999 688886432 2222222
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
+| +-.+......+.+.+.+++.+||..+|++|||+..+.+.+-
T Consensus 328 -------iD-~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 328 -------ID-AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred -------cc-ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 22 11122223456678999999999999999999999985443
No 230
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.6e-35 Score=303.03 Aligned_cols=193 Identities=26% Similarity=0.370 Sum_probs=163.9
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|++|.||+|+.. +|..||||.++... ......+.+|+.++.+++||||+++++++.+++..++||||++ +
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~ 83 (285)
T cd07861 5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-M 83 (285)
T ss_pred eeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-C
Confidence 467999999999999964 68999999986432 2234678899999999999999999999999999999999997 6
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++..... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 157 (285)
T cd07861 84 DLKKYLDSLPK--GQYMDAELVKSYLYQILQGILFCH----SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV 157 (285)
T ss_pred CHHHHHhcCCC--CCcCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCccc
Confidence 89888865431 245899999999999999999999 789999999999999999999999999998755332
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
...++..|+|||++.. ...++.++|||||||++|||+||+.||...
T Consensus 158 ~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~il~~l~tg~~~~~~~ 205 (285)
T cd07861 158 YTHEVVTLWYRAPEVLLG-SPRYSTPVDIWSIGTIFAEMATKKPLFHGD 205 (285)
T ss_pred ccCCcccccccChHHhcC-CCCcCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 2344678999997643 345788999999999999999999999753
No 231
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1e-35 Score=312.70 Aligned_cols=193 Identities=25% Similarity=0.352 Sum_probs=165.9
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
+.+.||+|+||.||+++.. +++.||+|++.+.. ....+.+.+|+.++..++|+||+++++++.+++..++||||++
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (331)
T cd05597 5 ILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYV 84 (331)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCC
Confidence 3578999999999999954 68999999986422 2234568899999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 85 g~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 85 GGDLLTLLSKFE----DRLPEDMARFYLAEMVLAIDSVH----QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred CCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999997532 34889999999999999999999 889999999999999999999999999998655432
Q ss_pred -----CCCCCCcccCCCccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 519 -----TVPRSNGYRAPELSSSD---GRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~---~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
...+|..|+|||++... ...++.++|||||||++|||++|+.||..
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 23578899999987531 24578899999999999999999999964
No 232
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5.2e-35 Score=299.65 Aligned_cols=240 Identities=25% Similarity=0.371 Sum_probs=194.1
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
...+.||+|+||.||+|... ++..||+|.+.... ......+.+|++++++++||||+++++++.++...++||||+++
T Consensus 7 ~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (277)
T cd06640 7 TKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGG 86 (277)
T ss_pred hhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCC
Confidence 34577999999999999965 58899999987443 33456789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... ++++.++..++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 87 ~~L~~~i~~~------~l~~~~~~~~~~~l~~~l~~lh----~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 87 GSALDLLRAG------PFDEFQIATMLKEILKGLDYLH----SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH----hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 9999998642 4789999999999999999999 789999999999999999999999999999665432
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++|||||||++|||+||+.||...... ...... ....
T Consensus 157 ~~~~~~~~~~y~apE~~~--~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~------------~~~~~~-~~~~---- 217 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQ--QSAYDSKADIWSLGITAIELAKGEPPNSDMHPM------------RVLFLI-PKNN---- 217 (277)
T ss_pred ccccccCcccccCHhHhc--cCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH------------hHhhhh-hcCC----
Confidence 234567899999764 456889999999999999999999998643211 011100 0000
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
...........+.+++.+||+.+|++||++.++++.
T Consensus 218 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 218 ------PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ------CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 011112345568889999999999999999999765
No 233
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=315.41 Aligned_cols=240 Identities=23% Similarity=0.393 Sum_probs=192.3
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcc--c--CCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCe--EEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLK--D--ASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREE--KLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~--~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e~ 437 (672)
.++||+|+|-+||+|... +|..||--.++ + ......++|..|+.+|+.|+||||++++.++.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 357999999999999964 58888754433 2 222345789999999999999999999999987665 6689999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-CCcEEEeccCCCccCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK-TGNARVSDFGLSIFAP 516 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~-~~~~kl~DfG~a~~~~ 516 (672)
+..|+|+.|+++.+ .++...+..|++||++||.|||.+ .++|||||||-+||+|+. -|.+||+|+|+|....
T Consensus 125 ~TSGtLr~Y~kk~~-----~vn~kaik~W~RQILkGL~yLHs~--~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r 197 (632)
T KOG0584|consen 125 FTSGTLREYRKKHR-----RVNIKAIKSWCRQILKGLVYLHSQ--DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR 197 (632)
T ss_pred ccCCcHHHHHHHhc-----cCCHHHHHHHHHHHHHHhhhhhcC--CCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence 99999999998765 488899999999999999999976 789999999999999986 5899999999998776
Q ss_pred CC---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 517 PS---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 517 ~~---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
.+ ...||+.|||||++. ..|.+.+||||||+.++||+|+..||..- .+..+.++++..+....
T Consensus 198 ~s~aksvIGTPEFMAPEmYE---E~YnE~VDVYaFGMCmLEMvT~eYPYsEC-----------~n~AQIYKKV~SGiKP~ 263 (632)
T KOG0584|consen 198 KSHAKSVIGTPEFMAPEMYE---ENYNELVDVYAFGMCMLEMVTSEYPYSEC-----------TNPAQIYKKVTSGIKPA 263 (632)
T ss_pred ccccceeccCccccChHHHh---hhcchhhhhhhhhHHHHHHHhccCChhhh-----------CCHHHHHHHHHcCCCHH
Confidence 54 467999999999653 57999999999999999999999999632 22333444443332111
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.+...+ ..++.++|.+|+.. ..+|||+.|+++
T Consensus 264 -----sl~kV~-----dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 264 -----ALSKVK-----DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred -----HhhccC-----CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 111111 13467788899999 999999999985
No 234
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=7.3e-36 Score=308.26 Aligned_cols=240 Identities=20% Similarity=0.326 Sum_probs=191.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
...||+|+||.||++... ++..||||.+........+.+.+|+.+++.++|+||+++++.+...+..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 467999999999999954 6899999998765555567789999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++... .+++.++..++.|++.||+||| +.+|+||||||+||++++++.++|+|||++......
T Consensus 107 ~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~ 176 (292)
T cd06658 107 TDIVTHT------RMNEEQIATVCLSVLRALSYLH----NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK 176 (292)
T ss_pred HHHHhcC------CCCHHHHHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCc
Confidence 9988532 3889999999999999999999 789999999999999999999999999998654322
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...++..|+|||.+. +..++.++||||||+++|||++|+.||..... ...+... ... +.+
T Consensus 177 ~~~~~~~y~aPE~~~--~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~------------~~~~~~~-~~~-----~~~ 236 (292)
T cd06658 177 SLVGTPYWMAPEVIS--RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP------------LQAMRRI-RDN-----LPP 236 (292)
T ss_pred eeecCccccCHHHHc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------------HHHHHHH-Hhc-----CCC
Confidence 234677899999654 45788999999999999999999999864321 1111111 111 111
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
..... ......+.+++.+|+..||++|||+.|+++.
T Consensus 237 ~~~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 237 RVKDS---HKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ccccc---cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11110 1122346677889999999999999999863
No 235
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.5e-35 Score=302.21 Aligned_cols=243 Identities=25% Similarity=0.335 Sum_probs=189.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||+||+|... +++.||+|.+...... ....+.+|++++++++|+||+++.+++..++..++||||+++
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05632 5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNG 84 (285)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccC
Confidence 367999999999999954 6899999998654322 234578899999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++.... ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||++......
T Consensus 85 ~~L~~~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH----~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 85 GDLKFHIYNMG---NPGFEEERALFYAAEILCGLEDLH----RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred ccHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc
Confidence 99998886432 235999999999999999999999 889999999999999999999999999998655332
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||....... ...-+.......
T Consensus 158 ~~~~~g~~~~~aPE~~~--~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~---------~~~~~~~~~~~~------ 220 (285)
T cd05632 158 IRGRVGTVGYMAPEVLN--NQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV---------KREEVDRRVLET------ 220 (285)
T ss_pred ccCCCCCcCccChHHhc--CCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH---------HHHHHHHhhhcc------
Confidence 345788999999764 4578899999999999999999999996432110 000011101100
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPN-----MSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~ 636 (672)
..... ......+.+++..|++.||++||+ +.++++
T Consensus 221 --~~~~~---~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 221 --EEVYS---AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred --ccccC---ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 00000 112235678888999999999999 555554
No 236
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-36 Score=287.35 Aligned_cols=267 Identities=21% Similarity=0.322 Sum_probs=204.1
Q ss_pred CHHHHHHHHhcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEE
Q 005880 356 ELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLL 433 (672)
Q Consensus 356 ~~~~l~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 433 (672)
.++|+-+-+.+.||+|+|+.|--++ +.+|..+|||++.+.....+.++.+|++++...+ |+||++++++|.++...||
T Consensus 74 ~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYL 153 (463)
T KOG0607|consen 74 KFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYL 153 (463)
T ss_pred hHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEE
Confidence 4667666688999999999999998 7789999999998887667889999999999985 9999999999999999999
Q ss_pred EEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC---cEEEeccC
Q 005880 434 VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG---NARVSDFG 510 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~---~~kl~DfG 510 (672)
|||.|.||+|..+++.. ..+++.+..++..+||.||.||| ..+|.||||||+|||...-. -+||+||.
T Consensus 154 VfEKm~GGplLshI~~~-----~~F~E~EAs~vvkdia~aLdFlH----~kgIAHRDlKPENiLC~~pn~vsPvKiCDfD 224 (463)
T KOG0607|consen 154 VFEKMRGGPLLSHIQKR-----KHFNEREASRVVKDIASALDFLH----TKGIAHRDLKPENILCESPNKVSPVKICDFD 224 (463)
T ss_pred EEecccCchHHHHHHHh-----hhccHHHHHHHHHHHHHHHHHHh----hcCcccccCCccceeecCCCCcCceeeeccc
Confidence 99999999999999865 45999999999999999999999 89999999999999987544 38999998
Q ss_pred CCccCCC------------CCCCCCCcccCCCcc---ccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 005880 511 LSIFAPP------------STVPRSNGYRAPELS---SSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGG 575 (672)
Q Consensus 511 ~a~~~~~------------~~~~~t~~y~aPE~l---~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~ 575 (672)
+..-... .+.+|+..|||||+. ..+...|+.++|.||+|||+|-|++|.+||.+.-+.+ -+-..
T Consensus 225 LgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~d-CGWdr 303 (463)
T KOG0607|consen 225 LGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGAD-CGWDR 303 (463)
T ss_pred cccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCc-CCccC
Confidence 7643221 145677789999964 3345678999999999999999999999998764322 11111
Q ss_pred CCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 576 AVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
...-...+..+-+......+.-.-..+..+.+ +-.+++...+..|+.+|-++.++++
T Consensus 304 -Ge~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~---eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 304 -GEVCRVCQNKLFESIQEGKYEFPDKDWAHISS---EAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred -CCccHHHHHHHHHHHhccCCcCChhhhHHhhH---HHHHHHHHHHhccHHhhhhhhhccC
Confidence 11122222222222211111111111222333 3445666788899999999998876
No 237
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.2e-35 Score=305.50 Aligned_cols=243 Identities=24% Similarity=0.356 Sum_probs=190.9
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||++... +++.||||.+...... ....+.+|+.++++++|+||+++++.+.+++..++||||+++
T Consensus 5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g 84 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 84 (285)
T ss_pred eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCC
Confidence 367999999999999954 6899999998653322 234577899999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++.... ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+|||++......
T Consensus 85 ~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~lH----~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 85 GDLKFHIYHMG---EAGFEEGRAVFYAAEICCGLEDLH----QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred CcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence 99999986433 235899999999999999999999 789999999999999999999999999998765432
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++. +..++.++|||||||++|||++|+.||....... ............ .
T Consensus 158 ~~~~~g~~~y~aPE~~~--~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~---------~~~~~~~~~~~~-~---- 221 (285)
T cd05630 158 IKGRVGTVGYMAPEVVK--NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI---------KREEVERLVKEV-Q---- 221 (285)
T ss_pred ccCCCCCccccChHHHc--CCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc---------hHHHHHhhhhhh-h----
Confidence 245788999999764 4578999999999999999999999997532110 000011111100 0
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPN-----MSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~ 636 (672)
... . ......+.+++.+||+.||++||| +.|+++
T Consensus 222 -~~~--~---~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 222 -EEY--S---EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred -hhc--C---ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 000 0 112235678888999999999999 778775
No 238
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.1e-35 Score=297.53 Aligned_cols=242 Identities=26% Similarity=0.386 Sum_probs=195.9
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
..+.||+|+||.||.++. .+++.+++|.+.... ....+++.+|++++++++|+||+++++++.+.+..++||||+++
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (256)
T cd08221 4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANG 83 (256)
T ss_pred EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCC
Confidence 347899999999999994 468999999886432 33456789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++.... ...+++.++..++.|+++||+||| +.+++||||+|+||++++++.+||+|||++......
T Consensus 84 ~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 84 GTLYDKIVRQK---GQLFEEEMVLWYLFQIVSAVSYIH----KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred CcHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHH----hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999997553 245899999999999999999999 789999999999999999999999999998765443
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||... ...+............
T Consensus 157 ~~~~~~~~~~y~ape~~~--~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~------------~~~~~~~~~~~~~~~~-- 220 (256)
T cd08221 157 MAETVVGTPYYMSPELCQ--GVKYNFKSDIWALGCVLYELLTLKRTFDAT------------NPLNLVVKIVQGNYTP-- 220 (256)
T ss_pred cccccCCCccccCHhhcC--CCCCCCcchhHHHHHHHHHHHHCCCCCCCC------------CHHHHHHHHHcCCCCC--
Confidence 345678899999654 456788999999999999999999998642 1222333222221110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
. .......+.+++.+||+.+|.+||++.|+++.
T Consensus 221 ---~------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 221 ---V------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred ---C------ccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 0 01223457788889999999999999999864
No 239
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3e-35 Score=305.21 Aligned_cols=260 Identities=20% Similarity=0.256 Sum_probs=188.9
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|+.. +++.||+|.++... ......+.+|++++++++||||+++++++..++..++||||++ ++
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~ 89 (301)
T cd07873 11 LDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KD 89 (301)
T ss_pred eeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cC
Confidence 467999999999999965 68899999987433 2234567889999999999999999999999999999999996 58
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||++......
T Consensus 90 l~~~l~~~~----~~~~~~~~~~~~~qi~~aL~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 161 (301)
T cd07873 90 LKQYLDDCG----NSINMHNVKLFLFQLLRGLNYCH----RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 161 (301)
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcc
Confidence 988886543 35889999999999999999999 889999999999999999999999999998754322
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC----CCCCCChhHHHHHHHhhhccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG----CGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 593 (672)
...++..|+|||++.. ...++.++|||||||++|||+||+.||......+... .........| ..........
T Consensus 162 ~~~~~~~~y~~PE~~~~-~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 239 (301)
T cd07873 162 SNEVVTLWYRPPDILLG-STDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETW-PGILSNEEFK 239 (301)
T ss_pred cccceeecccCcHHHhC-CCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhc-hhhhcccccc
Confidence 2345778999997643 3457889999999999999999999996432110000 0000000000 0000000000
Q ss_pred cccchhhccccC----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMRYKD----IEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..-.+.. .... .......+.+++.+|++.||.+|||+.|+++
T Consensus 240 ~~~~~~~-~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 240 SYNYPKY-RADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccCcc-ccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000 0000 0011235678888999999999999999974
No 240
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4e-36 Score=315.96 Aligned_cols=231 Identities=25% Similarity=0.359 Sum_probs=179.0
Q ss_pred cCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHHcCC---CCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 368 LGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVLGRL---RHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 368 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
||+|+||.||+|+.. +|+.||||++...... ....+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999954 6899999998643221 223345566666554 699999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qil~al~~LH----~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~ 151 (330)
T cd05586 81 GELFWHLQKE-----GRFSEDRAKFYIAELVLALEHLH----KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK 151 (330)
T ss_pred ChHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC
Confidence 9999998753 34899999999999999999999 789999999999999999999999999998754221
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...+|..|+|||++.. ...++.++|||||||++|||++|+.||.... ..+..........
T Consensus 152 ~~~~~~gt~~y~aPE~~~~-~~~~~~~~DvwslGvil~elltG~~Pf~~~~------------~~~~~~~i~~~~~---- 214 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLD-EKGYTKHVDFWSLGVLVFEMCCGWSPFYAED------------TQQMYRNIAFGKV---- 214 (330)
T ss_pred CccCccCCccccCHHHHcC-CCCCCCccceeccccEEEEeccCCCCCCCCC------------HHHHHHHHHcCCC----
Confidence 3457889999997642 3457899999999999999999999996432 2222222221110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM 631 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 631 (672)
.... . .....+.+++.+||+.||.+||++
T Consensus 215 ---~~~~-~---~~~~~~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 215 ---RFPK-N---VLSDEGRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred ---CCCC-c---cCCHHHHHHHHHHcCCCHHHCCCC
Confidence 0000 0 112346678889999999999954
No 241
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.4e-35 Score=310.56 Aligned_cols=233 Identities=24% Similarity=0.311 Sum_probs=185.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|... +|+.||+|+++... ....+.+..|.+++..+. |++|+++++++.+.+..++||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~ 84 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVN 84 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCC
Confidence 467999999999999954 68999999987532 223456778888888885 5778889999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|.+++... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~g~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH----~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 85 GGDLMYHIQQV-----GKFKEPQAVFYAAEISVGLFFLH----RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 99999998654 34899999999999999999999 789999999999999999999999999998754322
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||.... .......+.....
T Consensus 156 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslGvil~elltG~~pf~~~~------------~~~~~~~i~~~~~--- 218 (323)
T cd05615 156 VTTRTFCGTPDYIAPEIIA--YQPYGKSVDWWAYGVLLYEMLAGQPPFDGED------------EDELFQSIMEHNV--- 218 (323)
T ss_pred ccccCccCCccccCHHHHc--CCCCCCccchhhhHHHHHHHHhCCCCCCCCC------------HHHHHHHHHhCCC---
Confidence 345788999999764 4578899999999999999999999996432 1122222222111
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMS 632 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 632 (672)
.... .....+.+++.+||+.+|.+|++..
T Consensus 219 ------~~p~---~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 219 ------SYPK---SLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred ------CCCc---cCCHHHHHHHHHHcccCHhhCCCCC
Confidence 0011 1223567788899999999999853
No 242
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4e-35 Score=301.94 Aligned_cols=249 Identities=23% Similarity=0.369 Sum_probs=193.7
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccC-CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.+.||+|+||.||++... +|..||+|.++.. .......+.+|++++++++|+||+++++++..++..++||||+++
T Consensus 4 ~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (286)
T cd06622 4 EVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDA 83 (286)
T ss_pred hhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCC
Confidence 45678999999999999965 7899999988653 222346788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++.... ....+++..+..++.|+++||.|||+ +.+|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~l~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (286)
T cd06622 84 GSLDKLYAGGV--ATEGIPEDVLRRITYAVVKGLKFLKE---EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA 158 (286)
T ss_pred CCHHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHh---cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc
Confidence 99999987542 12358999999999999999999992 258999999999999999999999999998755332
Q ss_pred -CCCCCCcccCCCccccC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 519 -TVPRSNGYRAPELSSSD----GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~----~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
...++..|+|||.+... ...++.++|||||||++|||++|+.||...... .....+.......
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---------~~~~~~~~~~~~~--- 226 (286)
T cd06622 159 KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA---------NIFAQLSAIVDGD--- 226 (286)
T ss_pred ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh---------hHHHHHHHHhhcC---
Confidence 34567789999976432 124588999999999999999999999643110 1111111111110
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .........+.+++.+||+.+|++||++.++++
T Consensus 227 ------~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 227 ------PP--TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ------CC--CCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 00 001123445778888999999999999999885
No 243
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.9e-35 Score=300.93 Aligned_cols=239 Identities=25% Similarity=0.364 Sum_probs=193.1
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
..+.||.|++|.||+|+.. +++.||+|.+.... ......+.+|++++++++|+||+++++++.++...++|+||++++
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (274)
T cd06609 5 LLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGG 84 (274)
T ss_pred hhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCC
Confidence 4567999999999999965 68999999987543 334567899999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++... ++++..+..++.|++.||.||| +.+++||||+|+||++++++.++|+|||+++.....
T Consensus 85 ~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lh----~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 85 SCLDLLKPG------KLDETYIAFILREVLLGLEYLH----EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred cHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEEcccccceeecccccc
Confidence 999998743 5899999999999999999999 789999999999999999999999999999766533
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||.+. +..++.++||||||+++|||+||+.||..... ........ .......
T Consensus 155 ~~~~~~~~~y~~PE~~~--~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~------------~~~~~~~~-~~~~~~~- 218 (274)
T cd06609 155 RNTFVGTPFWMAPEVIK--QSGYDEKADIWSLGITAIELAKGEPPLSDLHP------------MRVLFLIP-KNNPPSL- 218 (274)
T ss_pred cccccCCccccChhhhc--cCCCCchhhHHHHHHHHHHHHhCCCCcccCch------------HHHHHHhh-hcCCCCC-
Confidence 345677899999764 44589999999999999999999999964321 11111111 1111110
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. . .....+.+++.+||..+|++|||++++++
T Consensus 219 ----~~-~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 219 ----EG-N---KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ----cc-c---ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 00 0 02335778888999999999999999976
No 244
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.2e-35 Score=297.53 Aligned_cols=241 Identities=23% Similarity=0.376 Sum_probs=190.4
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCc------chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI------GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
..+.||+|+||.||+|...+|+.+|||.++.... .....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 4 ~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (265)
T cd06631 4 KGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEF 83 (265)
T ss_pred ccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEec
Confidence 3567999999999999988899999998864321 1235688999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++++|.+++... .++++..+..++.|++.||+||| +.+|+|+||+|+||++++++.++|+|||++.....
T Consensus 84 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 84 VPGGSISSILNRF-----GPLPEPVFCKYTKQILDGVAYLH----NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred CCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 9999999999753 24789999999999999999999 78999999999999999999999999999865421
Q ss_pred -----------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 518 -----------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 518 -----------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
....++..|+|||++. +..++.++|||||||++|||++|+.||..... ..... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----------~~~~~-~~ 220 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVIN--ESGYGRKSDIWSIGCTVFEMATGKPPLASMDR-----------LAAMF-YI 220 (265)
T ss_pred ccccccccccccccCCCccccChhhhc--CCCCcchhhHHHHHHHHHHHHhCCCccccCCh-----------HHHHH-Hh
Confidence 1234677899999764 45678999999999999999999999964321 00110 00
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... ..+... ......+.+++.+||+.+|++||++.|+++
T Consensus 221 ~~~~~----~~~~~~-----~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 221 GAHRG----LMPRLP-----DSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred hhccC----CCCCCC-----CCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 000010 112345678888999999999999999874
No 245
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-35 Score=318.58 Aligned_cols=186 Identities=20% Similarity=0.299 Sum_probs=160.9
Q ss_pred HhcccCcCCeEEEEEEEEc---CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD---DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.+.||+|+||.||++... .+..||||.+... ..+.+|++++++++||||+++++++......++|||++.
T Consensus 96 i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 169 (392)
T PHA03207 96 ILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK- 169 (392)
T ss_pred EEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-
Confidence 4578999999999999853 3578999988643 345689999999999999999999999999999999995
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++... ..+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 170 ~~l~~~l~~~-----~~l~~~~~~~i~~ql~~aL~~LH----~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 170 CDLFTYVDRS-----GPLPLEQAITIQRRLLEALAYLH----GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 6888888432 45899999999999999999999 789999999999999999999999999998765432
Q ss_pred -----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 005880 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDG 566 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~ 566 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 291 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLA--LDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291 (392)
T ss_pred cccccccccccCccCHhHhc--CCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 345789999999764 4578899999999999999999999997643
No 246
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.8e-35 Score=304.69 Aligned_cols=246 Identities=24% Similarity=0.395 Sum_probs=191.7
Q ss_pred HhcccCcCCeEEEEEEEEc-CCc----EEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGS----VVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
..+.||+|+||.||+|... +|. .||+|.+..... ....++.+|+.++++++||||+++++++... ..++++||
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~ 89 (303)
T cd05110 11 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQL 89 (303)
T ss_pred eccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeehh
Confidence 3478999999999999853 454 578998875432 2345788999999999999999999998754 46799999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~~~g~l~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH----~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 90 MPHGCLLDYVHEHK----DNIGSQLLLNWCVQIAKGMMYLE----ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred cCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHh----hcCeeccccccceeeecCCCceEEccccccccccC
Confidence 99999999987543 35889999999999999999999 78999999999999999999999999999976543
Q ss_pred C-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 518 S-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 518 ~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
. ...++..|+|||.+. +..++.++|||||||++|||++ |+.||.... ... .......
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~--~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~------------~~~-~~~~~~~ 226 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIH--YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP------------TRE-IPDLLEK 226 (303)
T ss_pred cccccccCCCccccccCCHHHhc--cCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC------------HHH-HHHHHHC
Confidence 2 122356799999653 5678999999999999999997 899985421 111 1111111
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
... . ... ......+.+++..||..+|++||++.++++.|+++..
T Consensus 227 ~~~---~----~~~---~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 227 GER---L----PQP---PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred CCC---C----CCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 110 0 000 1123457788999999999999999999999998753
No 247
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.5e-35 Score=306.75 Aligned_cols=239 Identities=21% Similarity=0.327 Sum_probs=191.9
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
..||+|+||.||+|... +++.||+|.+........+.+.+|+.++..++||||+++++++..++..++|+||+++++|.
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 106 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT 106 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence 46999999999999954 68999999987554445677889999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----C
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-----T 519 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-----~ 519 (672)
+++.. ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||++...... .
T Consensus 107 ~~~~~------~~~~~~~~~~~~~qi~~~L~~LH----~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~ 176 (297)
T cd06659 107 DIVSQ------TRLNEEQIATVCESVLQALCYLH----SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 176 (297)
T ss_pred HHHhh------cCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccc
Confidence 98754 24899999999999999999999 889999999999999999999999999998654332 3
Q ss_pred CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchh
Q 005880 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLE 599 (672)
Q Consensus 520 ~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (672)
..++..|+|||++. +..++.++|||||||++|||++|+.||..... .+..... .... ...
T Consensus 177 ~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------------~~~~~~~-~~~~-----~~~ 236 (297)
T cd06659 177 LVGTPYWMAPEVIS--RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP------------VQAMKRL-RDSP-----PPK 236 (297)
T ss_pred eecCccccCHHHHc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------------HHHHHHH-hccC-----CCC
Confidence 45678899999764 45688999999999999999999999964321 1111111 1110 000
Q ss_pred hccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 600 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
.... ......+.+++.+||+.+|++||++.|+++.
T Consensus 237 ~~~~---~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 237 LKNA---HKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred cccc---CCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0001 1122346788889999999999999999874
No 248
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=5.9e-35 Score=295.58 Aligned_cols=241 Identities=22% Similarity=0.356 Sum_probs=191.7
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEc-CCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFA-REEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~~ 439 (672)
+.+.||+|++|.||++... +++.||+|++.... ....+.+.+|++++++++|+|++++++.+.. +...++||||++
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (257)
T cd08223 4 FVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCE 83 (257)
T ss_pred EEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccC
Confidence 4578999999999999954 57899999986432 2345678899999999999999999998764 446789999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+++|.+++.... ...+++.++..++.+++.||+||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 84 ~~~l~~~l~~~~---~~~l~~~~~~~~~~~l~~~l~~lH----~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 84 GGDLYHKLKEQK---GKLLPENQVVEWFVQIAMALQYLH----EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred CCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 999999997543 245899999999999999999999 889999999999999999999999999998765432
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||... +...+........ ...
T Consensus 157 ~~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~~l~~g~~~~~~~------------~~~~~~~~~~~~~-~~~ 221 (257)
T cd08223 157 DMASTLIGTPYYMSPELFS--NKPYNYKSDVWALGCCVYEMATLKHAFNAK------------DMNSLVYRIIEGK-LPP 221 (257)
T ss_pred CccccccCCcCccChhHhc--CCCCCchhhhHHHHHHHHHHHcCCCCCCCC------------CHHHHHHHHHhcC-CCC
Confidence 345678899999654 457888999999999999999999998632 2222222222211 100
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
........+.+++.+|++.+|++|||+.|+++
T Consensus 222 ----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 222 ----------MPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ----------CccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00123346788899999999999999999975
No 249
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.7e-35 Score=323.95 Aligned_cols=189 Identities=22% Similarity=0.358 Sum_probs=154.3
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCC------CCceeeeEEEEEcC-CeEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLR------HPNLVGLKAYYFAR-EEKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~~~~~~~-~~~~lv~ 435 (672)
+.+.||+|+||.||+|... +++.||||+++.... ..+++..|++++++++ |.+++++++++..+ .+.++||
T Consensus 133 i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~ 211 (467)
T PTZ00284 133 ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVM 211 (467)
T ss_pred EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEE
Confidence 3478999999999999954 588999999975322 3345566777666654 45689999988764 4678999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CCcEecCCCCCCEEeCCCC------------
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS-LKLTHGNIKSTNVLLDKTG------------ 502 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~~iiH~Dlkp~NIll~~~~------------ 502 (672)
|++ +++|.+++... ..+++..+..|+.|++.||+||| + .+||||||||+|||++.++
T Consensus 212 ~~~-g~~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~yLH----~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~ 281 (467)
T PTZ00284 212 PKY-GPCLLDWIMKH-----GPFSHRHLAQIIFQTGVALDYFH----TELHLMHTDLKPENILMETSDTVVDPVTNRALP 281 (467)
T ss_pred ecc-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----hcCCeecCCCCHHHEEEecCCcccccccccccC
Confidence 988 77898888643 35899999999999999999999 5 5999999999999998765
Q ss_pred ----cEEEeccCCCccCCCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 503 ----NARVSDFGLSIFAPPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 503 ----~~kl~DfG~a~~~~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
.+||+|||.+...... ...+|..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 282 ~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~--~~~~~~~~DiwSlGvil~elltG~~pf~~~ 348 (467)
T PTZ00284 282 PDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVL--GLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348 (467)
T ss_pred CCCceEEECCCCccccCccccccccCCccccCcHHhh--cCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4999999988654332 456889999999775 567899999999999999999999999754
No 250
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.4e-35 Score=310.14 Aligned_cols=246 Identities=20% Similarity=0.268 Sum_probs=189.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+++.. +++.||+|++.+.. ......+.+|+.++..++|+||+++++++.+.+..++||||+++
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~ 85 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVG 85 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCC
Confidence 478999999999999965 57889999986422 12334588899999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 86 g~L~~~l~~~~----~~l~~~~~~~~~~qi~~al~~lH----~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 86 GDLLTLLSKFE----DRLPEDMARFYLAEMVIAIDSVH----QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred CcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 99999997532 35899999999999999999999 889999999999999999999999999998654322
Q ss_pred ----CCCCCCcccCCCcccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 519 ----TVPRSNGYRAPELSSS---DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~---~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
...||..|+|||++.. ....++.++|||||||++|||++|+.||... +..+....+.....
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~------------~~~~~~~~i~~~~~ 225 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE------------SLVETYGKIMNHKE 225 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC------------CHHHHHHHHhCCCc
Confidence 2457899999998642 1346788999999999999999999999643 22233333322211
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCC--CCCCCCHHHHHHH
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSAS--PDQRPNMSHVVKL 637 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~d--P~~RPt~~evl~~ 637 (672)
... + ..........+.+++.+|+..+ +..|+++.|+++.
T Consensus 226 ~~~-~------p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 226 RFQ-F------PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ccc-C------CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 000 0 0001112234566777777544 4447899998766
No 251
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=9.8e-35 Score=302.24 Aligned_cols=243 Identities=27% Similarity=0.404 Sum_probs=192.3
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
..+.||+|+||.||+|+.. +|+.||+|.+..... ...+++.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 19 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 98 (307)
T cd06607 19 DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL 98 (307)
T ss_pred hheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC
Confidence 3478999999999999964 689999999864322 234578899999999999999999999999999999999996
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
|++.+++.... ..+++..+..++.|++.||.||| +.+|+||||+|+||++++++.++|+|||++......
T Consensus 99 -g~l~~~~~~~~----~~l~~~~~~~~~~ql~~~L~~LH----~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~ 169 (307)
T cd06607 99 -GSASDILEVHK----KPLQEVEIAAICHGALQGLAYLH----SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN 169 (307)
T ss_pred -CCHHHHHHHcc----cCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCcccEEECCCCCEEEeecCcceecCCCC
Confidence 67777775432 35899999999999999999999 789999999999999999999999999998766543
Q ss_pred CCCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 TVPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||++.. ....++.++||||||+++|||+||+.||.... .............
T Consensus 170 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~------------~~~~~~~~~~~~~------ 231 (307)
T cd06607 170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------------AMSALYHIAQNDS------ 231 (307)
T ss_pred CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc------------HHHHHHHHhcCCC------
Confidence 4557788999997642 24568899999999999999999999986431 1111111111100
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
+.. ........+.+++.+||+.+|++||++.+++..
T Consensus 232 ~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 232 PTL----SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CCC----CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 012234468888999999999999999999864
No 252
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.9e-35 Score=313.70 Aligned_cols=188 Identities=22% Similarity=0.318 Sum_probs=159.8
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC------CeEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR------EEKLLV 434 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv 434 (672)
..+.||+|+||.||+|+.. .++.||||++.... ......+.+|+.+++.++||||+++++++... ...++|
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv 107 (364)
T cd07875 28 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV 107 (364)
T ss_pred EEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEE
Confidence 3478999999999999954 68899999987532 23456788999999999999999999987643 356899
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
|||+++ +|.+.+.. .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 175 (364)
T cd07875 108 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175 (364)
T ss_pred EeCCCC-CHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHh----hCCeecCCCCHHHEEECCCCcEEEEeCCCccc
Confidence 999965 77777642 3788999999999999999999 88999999999999999999999999999976
Q ss_pred CCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 515 APPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 515 ~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
.... ...++..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 176 ~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 176 AGTSFMMTPYVVTRYYRAPEVIL--GMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred cCCCCcccCCcccCCcCCHHHHh--CCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 6543 345788999999764 567899999999999999999999999643
No 253
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=7.6e-35 Score=296.97 Aligned_cols=248 Identities=19% Similarity=0.359 Sum_probs=193.2
Q ss_pred HhcccCcCCeEEEEEEEEcC--CcEEEEEEcccCC----------cchHHHHHHHHHHHcC-CCCCceeeeEEEEEcCCe
Q 005880 364 SAEMLGKGGFGTAYKAVLDD--GSVVAVKRLKDAS----------IGGKREFEQHMEVLGR-LRHPNLVGLKAYYFAREE 430 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~--g~~vavK~~~~~~----------~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~ 430 (672)
..+.||+|+||.||+|.... ++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++..++.
T Consensus 4 ~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 83 (269)
T cd08528 4 VLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDR 83 (269)
T ss_pred hhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCe
Confidence 35679999999999999764 6889999875321 1123457778888865 799999999999999999
Q ss_pred EEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 431 KLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 431 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
.++||||+++++|.+++..... ....+++..+++++.|++.||.|||. ..+++||||+|+||+++.++.+||+|||
T Consensus 84 ~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~~i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 84 LYIVMDLIEGAPLGEHFNSLKE-KKQRFTEERIWNIFVQMVLALRYLHK---EKRIVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred EEEEEecCCCCcHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHhcc---CCceeecCCCHHHEEECCCCcEEEeccc
Confidence 9999999999999998854321 12458999999999999999999992 2579999999999999999999999999
Q ss_pred CCccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 511 LSIFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 511 ~a~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
.+...... ...++..|+|||.+. +..++.++||||||+++|||++|+.||... +........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~--~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~------------~~~~~~~~~ 225 (269)
T cd08528 160 LAKQKQPESKLTSVVGTILYSCPEIVK--NEPYGEKADVWAFGCILYQMCTLQPPFYST------------NMLSLATKI 225 (269)
T ss_pred ceeecccccccccccCcccCcChhhhc--CCCCchHHHHHHHHHHHHHHHhCCCccccc------------CHHHHHHHH
Confidence 99765543 345677899999764 456899999999999999999999998632 222222222
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
..... ... . .......+.+++.+||+.||++||++.||.++++
T Consensus 226 ~~~~~-~~~----~-----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 226 VEAVY-EPL----P-----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred hhccC-CcC----C-----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 21111 000 0 0112345788888999999999999999999886
No 254
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.9e-35 Score=297.90 Aligned_cols=248 Identities=24% Similarity=0.349 Sum_probs=191.4
Q ss_pred hcccCcCCeEEEEEEEEc----CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC------eEE
Q 005880 365 AEMLGKGGFGTAYKAVLD----DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE------EKL 432 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~ 432 (672)
.+.||+|+||.||+|... +++.||||+++... ....+++.+|++++++++||||+++++++...+ ..+
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 83 (273)
T cd05074 4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPM 83 (273)
T ss_pred hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceE
Confidence 467999999999999853 36889999987532 224567889999999999999999999886542 247
Q ss_pred EEEeecCCCChhHHhhcCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCC
Q 005880 433 LVSEYMPNGSLFWLLHGNRG-PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL 511 (672)
Q Consensus 433 lv~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~ 511 (672)
+++||+++|+|.+++..... .....+++....+++.|++.||+||| +.+|+||||||+||++++++.+||+|||+
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 84 VILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS----SKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred EEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeecccchhhEEEcCCCCEEECcccc
Confidence 89999999999988754321 12235789999999999999999999 78999999999999999999999999999
Q ss_pred CccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHH
Q 005880 512 SIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWV 583 (672)
Q Consensus 512 a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~ 583 (672)
++..... ...++..|++||.+. ...++.++|||||||++|||++ |++||.... ..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~sDi~slG~il~el~~~g~~p~~~~~------------~~~~~ 225 (273)
T cd05074 160 SKKIYSGDYYRQGCASKLPVKWLALESLA--DNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE------------NSEIY 225 (273)
T ss_pred cccccCCcceecCCCccCchhhcCHhHHh--cCccchhhhhHHHHHHHHHHhhCCCCCCCCCC------------HHHHH
Confidence 8765432 222345799999653 4567889999999999999999 888885332 11111
Q ss_pred HHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
......... .. .......+.+++.+||+.+|++||++.|+++.|+++
T Consensus 226 ~~~~~~~~~--------~~---~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 226 NYLIKGNRL--------KQ---PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHHcCCcC--------CC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111111100 00 012234688899999999999999999999999876
No 255
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=300.72 Aligned_cols=238 Identities=23% Similarity=0.328 Sum_probs=198.7
Q ss_pred hcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcc--hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIG--GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|.|+.|-+|+ .-+|..||||++.+.... ....+.+|++.|+-++|||||++|.+.......|||+|.-++|
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~G 102 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGG 102 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCc
Confidence 4679999999999998 457999999999865543 3567889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-CCcEEEeccCCCccCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK-TGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~-~~~~kl~DfG~a~~~~~~-- 518 (672)
+|++|+..+. .-+.+....+++.||+.|+.|.| +..+|||||||+||.+-+ -|-+||.|||++-.+.+.
T Consensus 103 Dl~DyImKHe----~Gl~E~La~kYF~QI~~AI~YCH----qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k 174 (864)
T KOG4717|consen 103 DLFDYIMKHE----EGLNEDLAKKYFAQIVHAISYCH----QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK 174 (864)
T ss_pred hHHHHHHhhh----ccccHHHHHHHHHHHHHHHHHHh----hhhhhcccCCcceeEEeeecCceEeeeccccccCCCcch
Confidence 9999997765 34899999999999999999999 789999999999998754 688999999999887765
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
+.+|+..|-|||++.++ ..-.+++||||+|||||.|+.|++||+..++.+ .+..++
T Consensus 175 L~TsCGSLAYSAPEILLGD-sYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE---------------------TLTmIm 232 (864)
T KOG4717|consen 175 LTTSCGSLAYSAPEILLGD-SYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE---------------------TLTMIM 232 (864)
T ss_pred hhcccchhhccCchhhhcC-ccCCcchhhhHHHHHHHHHHhCCCccccccchh---------------------hhhhhh
Confidence 67788899999998754 344689999999999999999999998765543 122233
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVV 635 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 635 (672)
|-+..-+ .....+..+||..||..||.+|-+.+|++
T Consensus 233 DCKYtvP---shvS~eCrdLI~sMLvRdPkkRAslEeI~ 268 (864)
T KOG4717|consen 233 DCKYTVP---SHVSKECRDLIQSMLVRDPKKRASLEEIV 268 (864)
T ss_pred cccccCc---hhhhHHHHHHHHHHHhcCchhhccHHHHh
Confidence 3333222 23344567788899999999999988885
No 256
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3e-35 Score=302.79 Aligned_cols=246 Identities=25% Similarity=0.341 Sum_probs=188.9
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEE-----cCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYF-----AREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~-----~~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|... +++.+|+|.+..... ...++.+|+.++.++ +||||+++++++. .++..++||||
T Consensus 23 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 101 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLEL 101 (286)
T ss_pred eeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEee
Confidence 467999999999999954 588999998865322 346788899999999 6999999999885 34568999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++|+|.++++.... ....+++..+..++.|+++||.||| +.+|+||||||+||++++++.+||+|||+++....
T Consensus 102 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~ 176 (286)
T cd06638 102 CNGGSVTDLVKGFLK-RGERMEEPIIAYILHEALMGLQHLH----VNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTS 176 (286)
T ss_pred cCCCCHHHHHHHhhc-cCccccHHHHHHHHHHHHHHHHHHH----hCCccccCCCHHhEEECCCCCEEEccCCceeeccc
Confidence 999999998864321 1245889999999999999999999 78999999999999999999999999999876543
Q ss_pred C-----CCCCCCcccCCCccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 518 S-----TVPRSNGYRAPELSSSD---GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 518 ~-----~~~~t~~y~aPE~l~~~---~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
. ...++..|+|||++... +..++.++|||||||++|||++|+.||...... ... ......
T Consensus 177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~-----------~~~-~~~~~~ 244 (286)
T cd06638 177 TRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM-----------RAL-FKIPRN 244 (286)
T ss_pred CCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh-----------HHH-hhcccc
Confidence 2 34577889999976421 345788999999999999999999998643211 000 000000
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
......++ ......+.+++.+||+.||++|||+.||++.
T Consensus 245 -~~~~~~~~--------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 245 -PPPTLHQP--------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred -CCCcccCC--------CCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 00000010 1112357788999999999999999999864
No 257
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.9e-35 Score=295.44 Aligned_cols=242 Identities=30% Similarity=0.446 Sum_probs=195.0
Q ss_pred hcccCcCCeEEEEEEEEcC-----CcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLDD-----GSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.+.||+|+||.||+++..+ +..||+|+++..... ..+.+.+|++++..++|+||+++++++.+.+..+++|||+
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~ 83 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYM 83 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEecc
Confidence 4789999999999999653 388999999765443 5678999999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++++|.+++..... ..+++.++..++.|++.||+||| +.+++||||||+||++++++.++|+|||+++.....
T Consensus 84 ~~~~l~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh----~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 84 EGGDLLDYLRKNRP---KELSLSDLLSFALQIARGMEYLE----SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred CCCCHHHHHHhhhh---ccCCHHHHHHHHHHHHHHHHHHh----cCCeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 99999999975431 12899999999999999999999 889999999999999999999999999999766543
Q ss_pred ------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 519 ------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 519 ------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
...++..|+|||.+ .+..++.++||||+|+++|||++ |+.||... +.............
T Consensus 157 ~~~~~~~~~~~~~y~~Pe~~--~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~------------~~~~~~~~~~~~~~ 222 (258)
T smart00219 157 DYYKKKGGKLPIRWMAPESL--KDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM------------SNEEVLEYLKKGYR 222 (258)
T ss_pred cccccccCCCcccccChHHh--ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC------------CHHHHHHHHhcCCC
Confidence 12245789999965 45678899999999999999998 78887532 22222222222111
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 638 (672)
. . ........+.+++.+|+..||++|||+.|+++.|
T Consensus 223 ~-~----------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 223 L-P----------KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred C-C----------CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0 0 0011334678889999999999999999998764
No 258
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.8e-35 Score=296.12 Aligned_cols=241 Identities=23% Similarity=0.401 Sum_probs=194.9
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
..+.||+|+||.||++.. .+|+.||+|++.... ....+++.+|++++++++||||+++++++...+..++||||+++
T Consensus 4 ~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd08218 4 KVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEG 83 (256)
T ss_pred EEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCC
Confidence 357899999999999995 468999999986432 23456889999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++..... ..+++.++.+++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 84 ~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 84 GDLYKKINAQRG---VLFPEDQILDWFVQICLALKHVH----DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 999999875431 35789999999999999999999 789999999999999999999999999999765442
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++|||||||++|+|++|+.||... +..+.+.........
T Consensus 157 ~~~~~~~~~~~~~pe~~~--~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~------------~~~~~~~~~~~~~~~--- 219 (256)
T cd08218 157 LARTCIGTPYYLSPEICE--NRPYNNKSDIWALGCVLYEMCTLKHAFEAG------------NMKNLVLKIIRGSYP--- 219 (256)
T ss_pred hhhhccCCccccCHHHhC--CCCCCCccchhHHHHHHHHHHcCCCCccCC------------CHHHHHHHHhcCCCC---
Confidence 234677899999754 457888999999999999999999998632 222233322222110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.........+.+++.+||+.+|.+||++.||++
T Consensus 220 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 220 --------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred --------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 001122345788889999999999999999986
No 259
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=7.4e-35 Score=296.67 Aligned_cols=238 Identities=24% Similarity=0.392 Sum_probs=189.4
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---------hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---------GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLV 434 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 434 (672)
...||+|++|.||+|... +++.||+|.+...... ..+.+.+|++++++++||||+++++++...+..++|
T Consensus 5 ~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (267)
T cd06628 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIF 84 (267)
T ss_pred cceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEE
Confidence 467999999999999954 6889999988643322 124688999999999999999999999999999999
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
|||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||+|+||++++++.+||+|||.++.
T Consensus 85 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lH----~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 85 LEYVPGGSVAALLNNY-----GAFEETLVRNFVRQILKGLNYLH----NRGIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred EEecCCCCHHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHH----hcCcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 9999999999999754 34889999999999999999999 78999999999999999999999999999876
Q ss_pred CCCC-----------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHH
Q 005880 515 APPS-----------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWV 583 (672)
Q Consensus 515 ~~~~-----------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 583 (672)
.... ...++..|+|||.+. +..++.++|||||||++|||++|+.||..... ..-+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~--~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------------~~~~ 221 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVK--QTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ------------LQAI 221 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhc--cCCCCchhhhHHHHHHHHHHhhCCCCCCCccH------------HHHH
Confidence 6421 123567899999664 45678899999999999999999999964211 0111
Q ss_pred HHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... ...+.. .......+.+++.+||+.||.+||++.|+++
T Consensus 222 ~~~~~------~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 222 FKIGE------NASPEI-----PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HHHhc------cCCCcC-----CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11100 000111 0112345778888999999999999999975
No 260
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.4e-35 Score=300.42 Aligned_cols=245 Identities=34% Similarity=0.526 Sum_probs=192.4
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHH--HHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKR--EFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~--~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+++.. +++.||+|++......... ...+|+.++++++||||+++++++.+....++||||++++
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~ 83 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGG 83 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTE
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccc
Confidence 478999999999999966 4678999999876543322 3456999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC----
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP---- 517 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~---- 517 (672)
+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.++|+|||.+.....
T Consensus 84 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~Lh----~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~ 154 (260)
T PF00069_consen 84 SLQDYLQKN-----KPLSEEEILKIAYQILEALAYLH----SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNEN 154 (260)
T ss_dssp BHHHHHHHH-----SSBBHHHHHHHHHHHHHHHHHHH----HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSE
T ss_pred ccccccccc-----ccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccccccc
Confidence 999999822 35899999999999999999999 78999999999999999999999999999975311
Q ss_pred -CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 518 -STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 518 -~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
....++..|+|||++. .+...+.++||||+|+++|+|++|+.||..... .+.............
T Consensus 155 ~~~~~~~~~y~aPE~~~-~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~---------~~~~~~~~~~~~~~~----- 219 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQ-QGKKYTRKSDIWSLGIILYELLTGKLPFEESNS---------DDQLEIIEKILKRPL----- 219 (260)
T ss_dssp BSSSSSSGGGSCHHHHT-TTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH---------HHHHHHHHHHHHTHH-----
T ss_pred ccccccccccccccccc-ccccccccccccccccccccccccccccccccc---------hhhhhhhhhcccccc-----
Confidence 2455688899999754 256889999999999999999999999964310 011111111111110
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... ........+.+++.+||+.||++||++.++++
T Consensus 220 ~~~~~---~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 220 PSSSQ---QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHTT---SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ccccc---ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000 00111257889999999999999999999974
No 261
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2e-35 Score=310.55 Aligned_cols=247 Identities=21% Similarity=0.252 Sum_probs=189.1
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
+.+.||+|+||.||+++.. +++.||+|.+.+.. ......+.+|..++..++|+||+++++++.+++..++||||++
T Consensus 5 i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~ 84 (331)
T cd05624 5 IIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYV 84 (331)
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCC
Confidence 3578999999999999965 67899999986422 2234557889999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~~L~~lH----~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 85 GGDLLTLLSKFE----DRLPEDMARFYIAEMVLAIHSIH----QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred CCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 999999997532 35889999999999999999999 889999999999999999999999999998765432
Q ss_pred -----CCCCCCcccCCCccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 519 -----TVPRSNGYRAPELSSSD---GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~---~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
...++.+|+|||++... ...++.++|||||||++|||++|+.||.... ..+....+....
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~------------~~~~~~~i~~~~ 224 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES------------LVETYGKIMNHE 224 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC------------HHHHHHHHHcCC
Confidence 24578899999976532 1357889999999999999999999996432 222222222211
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQ--RPNMSHVVKL 637 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~~ 637 (672)
.. ............++.+++.+|+..++.+ |++++++++.
T Consensus 225 ~~-------~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 225 ER-------FQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred Cc-------ccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 00 0000111112345667777888765544 5688888754
No 262
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.1e-34 Score=298.54 Aligned_cols=253 Identities=22% Similarity=0.306 Sum_probs=191.4
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++|+||+++++++......++||||++++
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 85 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHT 85 (286)
T ss_pred eeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCcc
Confidence 467999999999999965 58999999986432 223456889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|..++... ..+++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 86 ~l~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~LH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07847 86 VLNELEKNP-----RGVPEHLIKKIIWQTLQAVNFCH----KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDD 156 (286)
T ss_pred HHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCChhhEEEcCCCcEEECccccceecCCCccc
Confidence 888877543 24899999999999999999999 789999999999999999999999999999766543
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR-------- 588 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 588 (672)
...++..|+|||++.. ...++.++||||||+++|||++|+.||......+ ..........
T Consensus 157 ~~~~~~~~~~~aPE~~~~-~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07847 157 YTDYVATRWYRAPELLVG-DTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD---------QLYLIRKTLGDLIPRHQQ 226 (286)
T ss_pred ccCcccccccCCHHHHhC-CCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH---------HHHHHHHHhCCCChHHhh
Confidence 2345678999997642 3457889999999999999999999996543211 0000000000
Q ss_pred ----hhccccccchhhccccCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 589 ----EEWTAEVFDLELMRYKDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 589 ----~~~~~~~~d~~~~~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.........+........ ......+.+++.+||+.+|++||++.|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 227 IFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred hcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000000000000000 112346788999999999999999999874
No 263
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3.4e-35 Score=302.73 Aligned_cols=254 Identities=24% Similarity=0.307 Sum_probs=184.3
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCC---CCCceeeeEEEEEc-----CCeEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRL---RHPNLVGLKAYYFA-----REEKLL 433 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----~~~~~l 433 (672)
.+.||+|+||.||+|... +|+.||+|.++.... .....+.+|+++++.+ +||||+++++++.. ....++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~l 84 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTL 84 (288)
T ss_pred eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEE
Confidence 467999999999999955 689999999874322 1234556677776655 79999999998864 235789
Q ss_pred EEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 434 VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
||||++ ++|.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 85 VFEHVD-QDLRTYLDKVP---PPGLPAETIKDLMRQFLRGLDFLH----ANCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred EEcccc-cCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 999997 58988887543 234899999999999999999999 7899999999999999999999999999997
Q ss_pred cCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH--
Q 005880 514 FAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV-- 587 (672)
Q Consensus 514 ~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-- 587 (672)
..... ...++..|+|||++. +..++.++||||+||++|||++|++||....... .+........
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~--------~~~~~~~~~~~~ 226 (288)
T cd07863 157 IYSCQMALTPVVVTLWYRAPEVLL--QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD--------QLGKIFDLIGLP 226 (288)
T ss_pred cccCcccCCCccccccccCchHhh--CCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH--------HHHHHHHHhCCC
Confidence 65432 345678899999764 4578999999999999999999999986432110 0111100000
Q ss_pred -hhhccc------cccchhhccc--cChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 588 -REEWTA------EVFDLELMRY--KDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 588 -~~~~~~------~~~d~~~~~~--~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
...+.. ..+.+..... ....+....+.+++.+||+.||++|||+.|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 227 PEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000 0000000000 000112345678899999999999999999874
No 264
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=7.4e-35 Score=297.58 Aligned_cols=246 Identities=25% Similarity=0.376 Sum_probs=191.0
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc----------hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG----------GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKL 432 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~----------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 432 (672)
..+.||+|+||.||+|... +|+.||+|.++..... ..+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (272)
T cd06629 5 KGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLS 84 (272)
T ss_pred ecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceE
Confidence 3478999999999999854 6899999988532110 1246788999999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCC
Q 005880 433 LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS 512 (672)
Q Consensus 433 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a 512 (672)
+||||+++|+|.+++... ..+++..+..++.|++.||.||| +.+++||||+|+||+++.++.++|+|||++
T Consensus 85 lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 85 IFLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLH----SKGILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred EEEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHh----hCCeeecCCChhhEEEcCCCeEEEeecccc
Confidence 999999999999999754 35899999999999999999999 789999999999999999999999999998
Q ss_pred ccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 005880 513 IFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQS 585 (672)
Q Consensus 513 ~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 585 (672)
+..... ...++..|+|||.+......++.++||||||+++||+++|+.||..... . .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----------~-~~~~~ 223 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-----------I-AAMFK 223 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-----------H-HHHHH
Confidence 765422 2346778999997654434578999999999999999999999853211 1 11111
Q ss_pred HHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... ....+.... ..+....+.+++.+||..+|.+||++.+|++
T Consensus 224 ~~~~~-~~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 224 LGNKR-SAPPIPPDV-----SMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred hhccc-cCCcCCccc-----cccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 11110 011111110 0112346778888999999999999999875
No 265
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5.4e-35 Score=302.81 Aligned_cols=250 Identities=22% Similarity=0.287 Sum_probs=191.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc-----hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG-----GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.+.||+|+||.||+|... +|+.||||.++..... ....+..|++++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM 84 (298)
T ss_pred eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc
Confidence 467999999999999964 6899999999754332 3456778999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
+|+|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.++|+|||+++.....
T Consensus 85 -~~~L~~~i~~~~----~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 85 -ETDLEKVIKDKS----IVLTPADIKSYMLMTLRGLEYLH----SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred -CCCHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 999999997543 35899999999999999999999 889999999999999999999999999999766443
Q ss_pred -----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh---
Q 005880 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE--- 590 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 590 (672)
...++..|+|||.+.. ...++.++|||||||++|||++|.+||......+ ........-
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~------------~~~~~~~~~~~~ 222 (298)
T cd07841 156 NRKMTHQVVTRWYRAPELLFG-ARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID------------QLGKIFEALGTP 222 (298)
T ss_pred CccccccccceeeeCHHHHhC-CCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH------------HHHHHHHHcCCC
Confidence 2234567999997642 3567899999999999999999987776432110 001110000
Q ss_pred ---------ccccccchhhcccc----ChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 591 ---------WTAEVFDLELMRYK----DIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 591 ---------~~~~~~d~~~~~~~----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.............. ........+.+++.+||+.||++|||+.||++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 223 TEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred chhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 00000000000000 00122356788999999999999999999986
No 266
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-36 Score=310.31 Aligned_cols=252 Identities=22% Similarity=0.341 Sum_probs=202.7
Q ss_pred cCHHHHHHHHhcccCcCCeEEEEEEEEcC-CcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEE
Q 005880 355 FELEDLLRASAEMLGKGGFGTAYKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLL 433 (672)
Q Consensus 355 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 433 (672)
...+|... +...||.|+||.||+|..++ +...|-|++...+....++|.-||+||+.++||+||++++.|+.++..|+
T Consensus 28 lnP~d~We-IiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwi 106 (1187)
T KOG0579|consen 28 LNPRDHWE-IIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWI 106 (1187)
T ss_pred CCHHHHHH-HHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEE
Confidence 34444432 34568999999999999664 45556788877666678899999999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 434 VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
+.|||.||-.+.++-.-. .++.+.++.-+++|++.||.||| +.+|||||||+.|||++-+|.++|+|||.+.
T Consensus 107 liEFC~GGAVDaimlEL~----r~LtE~QIqvvc~q~ldALn~LH----s~~iIHRDLKAGNiL~TldGdirLADFGVSA 178 (1187)
T KOG0579|consen 107 LIEFCGGGAVDAIMLELG----RVLTEDQIQVVCYQVLDALNWLH----SQNIIHRDLKAGNILLTLDGDIRLADFGVSA 178 (1187)
T ss_pred EEeecCCchHhHHHHHhc----cccchHHHHHHHHHHHHHHHHHh----hcchhhhhccccceEEEecCcEeeecccccc
Confidence 999999999988876443 56999999999999999999999 8999999999999999999999999999885
Q ss_pred cCC-----CCCCCCCCcccCCCcccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 005880 514 FAP-----PSTVPRSNGYRAPELSSS---DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQS 585 (672)
Q Consensus 514 ~~~-----~~~~~~t~~y~aPE~l~~---~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 585 (672)
... .+...||+.|||||+... ....|+.++||||||+.|.||..+.+|... .+....+-.
T Consensus 179 Kn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe------------lnpMRVllK 246 (1187)
T KOG0579|consen 179 KNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE------------LNPMRVLLK 246 (1187)
T ss_pred cchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc------------cchHHHHHH
Confidence 443 247789999999998654 357889999999999999999999999652 222223322
Q ss_pred HHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+...+. |.+.. .......+.+++.+||.+||..||++.++++
T Consensus 247 iaKSeP------PTLlq---PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 247 IAKSEP------PTLLQ---PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred HhhcCC------CcccC---cchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 222211 11221 2345567888888999999999999999874
No 267
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.6e-36 Score=305.51 Aligned_cols=251 Identities=22% Similarity=0.326 Sum_probs=197.0
Q ss_pred cCHHHHHHHHhcccCcCCeEEEEEEEEcCCcEEEEEEccc--CCcchHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeE
Q 005880 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKD--ASIGGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEK 431 (672)
Q Consensus 355 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~ 431 (672)
+.+.+-.+...+.||+||.+.||++...+.+.+|+|++.. .+.....-|.+|++.|.+++ |.+||++++|-..++..
T Consensus 356 i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 356 IKVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYL 435 (677)
T ss_pred EEECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceE
Confidence 3444445556688999999999999988889999988753 33445678999999999995 99999999999999999
Q ss_pred EEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCC
Q 005880 432 LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL 511 (672)
Q Consensus 432 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~ 511 (672)
|+||||- ..+|..+|..... ....| .+..+..|++.++.+.| .+||||.||||.|+|+- .|.+||+|||+
T Consensus 436 YmvmE~G-d~DL~kiL~k~~~---~~~~~-~lk~ywkqML~aV~~IH----~~gIVHSDLKPANFLlV-kG~LKLIDFGI 505 (677)
T KOG0596|consen 436 YMVMECG-DIDLNKILKKKKS---IDPDW-FLKFYWKQMLLAVKTIH----QHGIVHSDLKPANFLLV-KGRLKLIDFGI 505 (677)
T ss_pred EEEeecc-cccHHHHHHhccC---CCchH-HHHHHHHHHHHHHHHHH----HhceeecCCCcccEEEE-eeeEEeeeech
Confidence 9999987 5699999987652 33445 78889999999999999 88999999999999984 57899999999
Q ss_pred CccCCCC-------CCCCCCcccCCCccccCCC---------CCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 005880 512 SIFAPPS-------TVPRSNGYRAPELSSSDGR---------KQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGG 575 (672)
Q Consensus 512 a~~~~~~-------~~~~t~~y~aPE~l~~~~~---------~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~ 575 (672)
|..+... ...||..||+||.+..... +.+.++||||+|||||+|+.|+.||..-
T Consensus 506 A~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~---------- 575 (677)
T KOG0596|consen 506 ANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI---------- 575 (677)
T ss_pred hcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH----------
Confidence 9877654 5678999999997654322 3678999999999999999999999521
Q ss_pred CCChhHHHHHHHhhhccccccchhhc-cccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 576 AVDLPRWVQSVVREEWTAEVFDLELM-RYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... .+..+.|+... .++...+ ..+++++++.||+.||.+||+..|+++
T Consensus 576 ----~n~~a------Kl~aI~~P~~~Iefp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 576 ----INQIA------KLHAITDPNHEIEFPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred ----HHHHH------HHHhhcCCCccccccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 11111 12333444221 1222221 123889999999999999999999975
No 268
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=8.5e-35 Score=297.65 Aligned_cols=247 Identities=24% Similarity=0.348 Sum_probs=193.1
Q ss_pred hcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|+.+ +...|++|.+...... ...++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 89 (275)
T cd05046 10 ITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEY 89 (275)
T ss_pred eeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEe
Confidence 467999999999999954 2467999988754433 456899999999999999999999999988899999999
Q ss_pred cCCCChhHHhhcCCCCC----CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 438 MPNGSLFWLLHGNRGPG----RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
+++|+|.+++....... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.++++|||++.
T Consensus 90 ~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH----~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~ 165 (275)
T cd05046 90 TDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS----NARFVHRDLAARNCLVSSQREVKVSLLSLSK 165 (275)
T ss_pred cCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh----hcCcccCcCccceEEEeCCCcEEEccccccc
Confidence 99999999997554211 125899999999999999999999 7899999999999999999999999999986
Q ss_pred cCCCC------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 514 FAPPS------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 514 ~~~~~------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
..... ...++..|+|||.+. +...+.++||||||+++|||++ |..||.... ....+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~y~~PE~~~--~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~------------~~~~~~~~ 231 (275)
T cd05046 166 DVYNSEYYKLRNALIPLRWLAPEAVQ--EDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS------------DEEVLNRL 231 (275)
T ss_pred ccCcccccccCCceeEEeecChhhhc--cCCCCchhhHHHHHHHHHHHHhCCCCCccccc------------hHHHHHHH
Confidence 54322 223355699999654 4567889999999999999999 788885321 11122211
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
.... ... .........+.+++.+||+.+|++|||+.|+++.|.
T Consensus 232 ~~~~-~~~---------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 232 QAGK-LEL---------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HcCC-cCC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1111 000 000122346788999999999999999999999875
No 269
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=5e-35 Score=310.88 Aligned_cols=188 Identities=22% Similarity=0.300 Sum_probs=159.4
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC------CeEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR------EEKLLV 434 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv 434 (672)
..+.||+|+||.||++... .++.||||++.... ......+.+|+.+++.++||||+++++++... ...++|
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 100 (355)
T cd07874 21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLV 100 (355)
T ss_pred EEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEE
Confidence 3478999999999999954 68999999987532 22456778899999999999999999988643 246899
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
|||+++ +|.+.+.. .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 101 ~e~~~~-~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH----~~givHrDikp~Nill~~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 101 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_pred hhhhcc-cHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChHHEEECCCCCEEEeeCccccc
Confidence 999965 67766642 3788999999999999999999 88999999999999999999999999999986
Q ss_pred CCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 515 APPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 515 ~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
.... ...+|..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 169 ~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 169 AGTSFMMTPYVVTRYYRAPEVIL--GMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred CCCccccCCccccCCccCHHHHc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 6443 345788999999764 557889999999999999999999999643
No 270
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.3e-35 Score=303.30 Aligned_cols=251 Identities=22% Similarity=0.277 Sum_probs=188.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|+.. +|+.||+|+++.... .....+.+|++++++++||||+++++++.+....++|+||++ +
T Consensus 5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 83 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-Q 83 (284)
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-C
Confidence 467999999999999964 689999999864322 223567889999999999999999999999999999999996 5
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++.... ..+++..++.++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH----~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 155 (284)
T cd07839 84 DLKKYFDSCN----GDIDPEIVKSFMFQLLKGLAFCH----SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC 155 (284)
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC
Confidence 8888776432 35899999999999999999999 789999999999999999999999999998765432
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc-----
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW----- 591 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 591 (672)
...++..|+|||++.. ...++.++|||||||++|||+||+.|+...... .+......+.-.
T Consensus 156 ~~~~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~ 223 (284)
T cd07839 156 YSAEVVTLWYRPPDVLFG-AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-----------DDQLKRIFRLLGTPTEE 223 (284)
T ss_pred cCCCccccCCcChHHHhC-CcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH-----------HHHHHHHHHHhCCCChH
Confidence 2345778999997643 345789999999999999999999997532211 111111110000
Q ss_pred ----cccccchh-hccc-------cChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 ----TAEVFDLE-LMRY-------KDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 ----~~~~~d~~-~~~~-------~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.....+.. .... ........++.+++.+||+.||.+|||+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 224 SWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00000000 0000 000112345678888999999999999999975
No 271
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.3e-35 Score=301.05 Aligned_cols=243 Identities=23% Similarity=0.339 Sum_probs=189.0
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEc------CCeEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFA------REEKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~------~~~~~lv~ 435 (672)
+.+.||+|+||.||+|.. .+++.||+|.+..... ...++..|+.++.++ +|+||+++++++.. ....+++|
T Consensus 20 ~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~ 98 (282)
T cd06636 20 LVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVM 98 (282)
T ss_pred hheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEE
Confidence 447899999999999996 4689999998865432 446788899999998 69999999999863 45779999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+++|+|.+++..... ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.++|+|||++...
T Consensus 99 e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH----~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~ 171 (282)
T cd06636 99 EFCGAGSVTDLVKNTKG---NALKEDWIAYICREILRGLAHLH----AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 171 (282)
T ss_pred EeCCCCcHHHHHHHccC---CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEeeCcchhhh
Confidence 99999999999975432 34788899999999999999999 789999999999999999999999999998754
Q ss_pred CC-----CCCCCCCcccCCCccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 516 PP-----STVPRSNGYRAPELSSSD---GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 516 ~~-----~~~~~t~~y~aPE~l~~~---~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
.. ....++..|+|||++... ...++.++|||||||++|||++|+.||....... -....
T Consensus 172 ~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~------------~~~~~- 238 (282)
T cd06636 172 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR------------ALFLI- 238 (282)
T ss_pred hccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh------------hhhhH-
Confidence 32 234567889999976532 3467889999999999999999999996432110 00000
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.... ..... .......+.+++.+||+.||.+|||+.|+++
T Consensus 239 ~~~~-----~~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 239 PRNP-----PPKLK----SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hhCC-----CCCCc----ccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0000 00000 0122346888999999999999999999864
No 272
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=7.9e-35 Score=298.21 Aligned_cols=240 Identities=24% Similarity=0.408 Sum_probs=191.7
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC-cchHHHHHHHHHHHcCCC---CCceeeeEEEEEcCCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLR---HPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
..+.||+|+||.||+|.. .+++.||+|.++... .....++.+|++++++++ |||++++++++......++||||+
T Consensus 5 ~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06917 5 RLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYA 84 (277)
T ss_pred hhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecC
Confidence 357899999999999995 578999999986532 234567889999998886 999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++++|.+++... .+++..++.++.|+++||.||| +.+|+||||+|+||++++++.++|+|||++......
T Consensus 85 ~~~~L~~~~~~~------~l~~~~~~~i~~~i~~~l~~lh----~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 85 EGGSVRTLMKAG------PIAEKYISVIIREVLVALKYIH----KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred CCCcHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 999999998643 4899999999999999999999 789999999999999999999999999998765433
Q ss_pred -----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
...++..|+|||.+.. +..++.++|||||||++|+|++|+.||..... ..+.... ...
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~------------~~~~~~~-~~~--- 217 (277)
T cd06917 155 SSKRSTFVGTPYWMAPEVITE-GKYYDTKADIWSLGITIYEMATGNPPYSDVDA------------FRAMMLI-PKS--- 217 (277)
T ss_pred ccccccccCCcceeCHHHhcc-CCccccchhHHHHHHHHHHHHhCCCCCCCCCh------------hhhhhcc-ccC---
Confidence 3356778999997642 35578899999999999999999999964321 1111100 000
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..+.... ......+.+++.+||+.||++||++.|+++
T Consensus 218 --~~~~~~~----~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 218 --KPPRLED----NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred --CCCCCCc----ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0001100 012346788889999999999999999976
No 273
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=5.7e-36 Score=286.19 Aligned_cols=205 Identities=25% Similarity=0.406 Sum_probs=171.9
Q ss_pred CHHHHHH-HHhcccCcCCeEEEEEEEEcC-----CcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEc
Q 005880 356 ELEDLLR-ASAEMLGKGGFGTAYKAVLDD-----GSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427 (672)
Q Consensus 356 ~~~~l~~-~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 427 (672)
.+|++.+ .....||+|.||.||+|...+ ...+|+|+++.... +-.....+|+.+++.++||||+.+..++..
T Consensus 19 rve~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~ 98 (438)
T KOG0666|consen 19 RVEDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLS 98 (438)
T ss_pred hHHHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc
Confidence 3444442 345789999999999997432 23799999985432 234567899999999999999999998877
Q ss_pred -CCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC----C
Q 005880 428 -REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT----G 502 (672)
Q Consensus 428 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~----~ 502 (672)
+...++++||.+. +|..+++.++......++...+..|+.||+.|+.||| ++=|+||||||.||||..+ |
T Consensus 99 ~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH----~NWvlHRDLKPaNIlvmgdgperG 173 (438)
T KOG0666|consen 99 HDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH----SNWVLHRDLKPANILVMGDGPERG 173 (438)
T ss_pred cCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh----hhheeeccCCcceEEEeccCCccC
Confidence 7788999999988 8999998776655567999999999999999999999 7789999999999999877 8
Q ss_pred cEEEeccCCCccCCCC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 005880 503 NARVSDFGLSIFAPPS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDG 566 (672)
Q Consensus 503 ~~kl~DfG~a~~~~~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~ 566 (672)
.+||+|||+++.+... ..+.|..|+|||++.+ ...||.+.||||.|||+.||+|-++-|..+.
T Consensus 174 ~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLG-a~hYT~AiDvWAiGCIfaElLtl~PlF~g~E 244 (438)
T KOG0666|consen 174 RVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLG-ARHYTKAIDVWAIGCIFAELLTLEPLFKGRE 244 (438)
T ss_pred eeEeecccHHHHhhccccccccCCceEEEEEecChHHhcc-cccccchhhhHHHHHHHHHHHccCccccchh
Confidence 9999999999877543 4456889999998764 5789999999999999999999999887654
No 274
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2e-35 Score=314.38 Aligned_cols=190 Identities=25% Similarity=0.381 Sum_probs=165.6
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||++... +++.||+|+++... ......+.+|++++..++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~g 85 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPG 85 (360)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence 478999999999999965 68999999987432 22345788899999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 g~L~~~l~~~-----~~l~~~~~~~~~~qi~~~L~~lH----~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 86 GDMMTLLMKK-----DTLSEEATQFYIAETVLAIDAIH----QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred ccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence 9999999754 34899999999999999999999 889999999999999999999999999998644211
Q ss_pred --------------------------------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCC
Q 005880 519 --------------------------------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKC 560 (672)
Q Consensus 519 --------------------------------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~ 560 (672)
...||..|+|||++. +..++.++|||||||++|||++|+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~--~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFM--QTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHc--CCCCCCcceeccccceeeecccCCC
Confidence 235788999999764 5678899999999999999999999
Q ss_pred CCCCC
Q 005880 561 PSVID 565 (672)
Q Consensus 561 P~~~~ 565 (672)
||...
T Consensus 235 Pf~~~ 239 (360)
T cd05627 235 PFCSE 239 (360)
T ss_pred CCCCC
Confidence 99643
No 275
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=9.3e-35 Score=299.99 Aligned_cols=245 Identities=27% Similarity=0.383 Sum_probs=189.3
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcC-----CeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAR-----EEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-----~~~~lv~e~ 437 (672)
.+.||+|+||.||++.. .+++.+|+|.+..... ...++.+|+.++.++ +|||++++++++... +..++||||
T Consensus 27 ~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey 105 (291)
T cd06639 27 IETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLEL 105 (291)
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEE
Confidence 36799999999999996 4689999999865432 346778899999998 899999999998754 357999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++|+|.++++.... ....+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 106 ~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~ 180 (291)
T cd06639 106 CNGGSVTELVKGLLI-CGQRLDEAMISYILYGALLGLQHLH----NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTS 180 (291)
T ss_pred CCCCcHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEEcCCCCEEEeecccchhccc
Confidence 999999998864321 1245899999999999999999999 78999999999999999999999999999876543
Q ss_pred C-----CCCCCCcccCCCccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 518 S-----TVPRSNGYRAPELSSSD---GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 518 ~-----~~~~t~~y~aPE~l~~~---~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
. ...++..|+|||++... +..++.++|||||||++|||++|+.||..... ..-+....+.
T Consensus 181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~------------~~~~~~~~~~ 248 (291)
T cd06639 181 TRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP------------VKTLFKIPRN 248 (291)
T ss_pred ccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH------------HHHHHHHhcC
Confidence 2 34567789999976432 12368899999999999999999999864321 1111111111
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....+. ..+.....+.+++.+||+.+|++||++.|+++
T Consensus 249 -~~~~~~--------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 249 -PPPTLL--------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred -CCCCCC--------cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 000111 11223345888999999999999999999975
No 276
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.2e-34 Score=298.21 Aligned_cols=254 Identities=22% Similarity=0.295 Sum_probs=193.0
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.++++++||||+++++++..+...++||||+ +
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~ 82 (286)
T cd07832 4 ILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-P 82 (286)
T ss_pred EEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-C
Confidence 3577999999999999964 68999999987544 224568999999999999999999999999999999999999 9
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++.... .++++.+++.++.|+++||+||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 83 SDLSEVLRDEE----RPLPEAQVKSYMRMLLKGVAYMH----ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 99999987543 45899999999999999999999 789999999999999999999999999998766433
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh----
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE---- 590 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 590 (672)
...++..|+|||.+.. ...++.++||||+|+++|||+||++||....... ...++.......
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 224 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYG-ARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE---------QLAIVFRTLGTPNEET 224 (286)
T ss_pred CccccccCcccccCceeeec-cccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH---------HHHHHHHHcCCCChHH
Confidence 2346778999997643 3456899999999999999999988875432110 000110000000
Q ss_pred ---------ccccccchhh-ccc-cChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 591 ---------WTAEVFDLEL-MRY-KDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 591 ---------~~~~~~d~~~-~~~-~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+....+.... ... ....+....+.+++.+|++.+|++|||++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 225 WPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred HhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000000000 000 000112356788999999999999999999975
No 277
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=7.1e-35 Score=301.12 Aligned_cols=241 Identities=23% Similarity=0.381 Sum_probs=192.8
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
..+.||+|+||.||++.. .++..||+|.+........+.+.+|+.++++++||||+++++++...+..++|+||+++++
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (293)
T cd06647 23 RFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGS 102 (293)
T ss_pred eeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCc
Confidence 347899999999999985 4688999999875554456778999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 103 L~~~~~~~------~l~~~~~~~i~~~l~~al~~LH----~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~ 172 (293)
T cd06647 103 LTDVVTET------CMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 172 (293)
T ss_pred HHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH----hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccc
Confidence 99998643 3789999999999999999999 889999999999999999999999999988655432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||.+. ...++.++|||||||++||+++|+.||........ +.......
T Consensus 173 ~~~~~~~~y~~PE~~~--~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~------------~~~~~~~~------- 231 (293)
T cd06647 173 STMVGTPYWMAPEVVT--RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA------------LYLIATNG------- 231 (293)
T ss_pred ccccCChhhcCchhhc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh------------eeehhcCC-------
Confidence 234667899999764 45678999999999999999999999965432110 00000000
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
. ............+.+++.+||..+|++||++.+++..
T Consensus 232 -~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 232 -T-PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred -C-CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0001111223457788899999999999999999854
No 278
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4e-34 Score=298.94 Aligned_cols=247 Identities=28% Similarity=0.403 Sum_probs=194.4
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
..+.||+|+||.||+|+.. +|..||+|++..... .....+.+|++++++++|||++++++++.+++..++||||++
T Consensus 29 ~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 108 (317)
T cd06635 29 DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL 108 (317)
T ss_pred hhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC
Confidence 3477999999999999954 689999999864322 234578899999999999999999999999999999999996
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
|+|.+++.... .++++.++..++.|++.||.||| +.+|+||||+|+||+++.++.+||+|||++......
T Consensus 109 -g~l~~~~~~~~----~~l~~~~~~~i~~~i~~~l~~lH----~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (317)
T cd06635 109 -GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLH----SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPAN 179 (317)
T ss_pred -CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcccEEECCCCCEEEecCCCccccCCcc
Confidence 58877775433 45899999999999999999999 789999999999999999999999999998765543
Q ss_pred CCCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 TVPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||++.. ....++.++|||||||++|||++|+.||.... ..............
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~------------~~~~~~~~~~~~~~----- 242 (317)
T cd06635 180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------------AMSALYHIAQNESP----- 242 (317)
T ss_pred cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc------------HHHHHHHHHhccCC-----
Confidence 4567788999997642 24568899999999999999999999986431 11111111111100
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
..........+.+++.+||+.+|.+||++.++++.+-.+
T Consensus 243 -----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 243 -----TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred -----CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence 000112334578888899999999999999998765443
No 279
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6.8e-35 Score=297.94 Aligned_cols=246 Identities=27% Similarity=0.380 Sum_probs=192.0
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCC------eEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFARE------EKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~------~~~lv~ 435 (672)
+.+.||+|++|.||+|... +++.+++|++..... ...++.+|+++++++ +|+||+++++++.... ..++||
T Consensus 10 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~ 88 (275)
T cd06608 10 LVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVM 88 (275)
T ss_pred heeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEE
Confidence 3578999999999999965 578999999875543 456799999999999 6999999999997644 479999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+++++|.+++..... ....+++..+..++.|+++||+||| +.+++||||+|+||++++++.+||+|||++...
T Consensus 89 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH----~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 163 (275)
T cd06608 89 ELCGGGSVTDLVKGLRK-KGKRLKEEWIAYILRETLRGLAYLH----ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQL 163 (275)
T ss_pred EcCCCCcHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHh----cCCcccCCCCHHHEEEccCCeEEECCCccceec
Confidence 99999999999865331 1246899999999999999999999 889999999999999999999999999998755
Q ss_pred CCC-----CCCCCCcccCCCccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 516 PPS-----TVPRSNGYRAPELSSSD---GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 516 ~~~-----~~~~t~~y~aPE~l~~~---~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
... ...++..|+|||++... ...++.++|||||||++|||++|+.||...... .......
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------------~~~~~~~ 231 (275)
T cd06608 164 DSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM------------RALFKIP 231 (275)
T ss_pred ccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH------------HHHHHhh
Confidence 432 34467789999976432 345778999999999999999999999632110 1111111
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .. + ...........+.+++.+||..||++|||+.|+++
T Consensus 232 ~~-~~-----~---~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 232 RN-PP-----P---TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred cc-CC-----C---CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11 00 0 01111223456788899999999999999999975
No 280
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.1e-34 Score=293.20 Aligned_cols=241 Identities=26% Similarity=0.421 Sum_probs=193.2
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
..+.||+|+||.||++.. .+++.+|||.+.... ....+.+.+|++++++++||||+++++.+..++..++||||+++
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd08220 4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPG 83 (256)
T ss_pred EEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCC
Confidence 357899999999999995 468999999986543 23456789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC-CcEEEeccCCCccCCCC-
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT-GNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~-~~~kl~DfG~a~~~~~~- 518 (672)
++|.+++.... ...+++..+..++.++++||+||| +.+++||||||+||+++++ +.+||+|||.+......
T Consensus 84 ~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh----~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 84 GTLAEYIQKRC---NSLLDEDTILHFFVQILLALHHVH----TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999997543 245899999999999999999999 7899999999999999865 46899999999766543
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||.+. +..++.++||||||+++|+|++|+.||.... ....+........ ..+
T Consensus 157 ~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~------------~~~~~~~~~~~~~-~~~ 221 (256)
T cd08220 157 KAYTVVGTPCYISPELCE--GKPYNQKSDIWALGCVLYELASLKRAFEAAN------------LPALVLKIMSGTF-API 221 (256)
T ss_pred cccccccCCcccCchhcc--CCCCCcccchHHHHHHHHHHHhCCCCcccCc------------hHHHHHHHHhcCC-CCC
Confidence 345677899999764 4567889999999999999999999986432 2222222222111 000
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
. ......+.+++.+||+.+|.+|||+.|+++
T Consensus 222 ~----------~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 222 S----------DRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred C----------CCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0 112345778889999999999999999975
No 281
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.9e-35 Score=288.76 Aligned_cols=241 Identities=25% Similarity=0.382 Sum_probs=193.8
Q ss_pred HhcccCcCCeEEEEEEEEcC-CcEEEEEEcccCCcch---HHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLDD-GSVVAVKRLKDASIGG---KREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
..+.||.|..|+||++++++ +..+|+|++.+..... ..+.+.|-+||+.++||.+..+|+.+..++..++|||||+
T Consensus 81 llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCp 160 (459)
T KOG0610|consen 81 LLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCP 160 (459)
T ss_pred HHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCC
Confidence 45789999999999999764 5899999998755443 3467789999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
||+|..+.+.+.. ..+++..+.-++..++-||+||| -.|||.|||||+||||.++|++.|+||.++.....
T Consensus 161 GGdL~~LrqkQp~---~~fse~~aRFYaAEvl~ALEYLH----mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 161 GGDLHSLRQKQPG---KRFSESAARFYAAEVLLALEYLH----MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred CccHHHHHhhCCC---CccchhhHHHHHHHHHHHHHHHH----hhceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 9999999987653 56999999999999999999999 78999999999999999999999999998632100
Q ss_pred -----------------------------------------------------------CCCCCCCcccCCCccccCCCC
Q 005880 518 -----------------------------------------------------------STVPRSNGYRAPELSSSDGRK 538 (672)
Q Consensus 518 -----------------------------------------------------------~~~~~t~~y~aPE~l~~~~~~ 538 (672)
...+||-.|.|||++. +..
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~--G~G 311 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIR--GEG 311 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeee--cCC
Confidence 0123456699999886 456
Q ss_pred CCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHH
Q 005880 539 QSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAM 618 (672)
Q Consensus 539 ~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~ 618 (672)
.+.++|.|+|||++|||+.|+-||.+.+..+ -+..++.+ .+ .++...+......+||+
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~------------Tl~NIv~~---------~l-~Fp~~~~vs~~akDLIr 369 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE------------TLRNIVGQ---------PL-KFPEEPEVSSAAKDLIR 369 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchh------------hHHHHhcC---------CC-cCCCCCcchhHHHHHHH
Confidence 7889999999999999999999998765432 11111111 11 12222244566788999
Q ss_pred hccCCCCCCCCC----HHHHH
Q 005880 619 ACTSASPDQRPN----MSHVV 635 (672)
Q Consensus 619 ~Cl~~dP~~RPt----~~evl 635 (672)
+.|.+||.+|.. +.||-
T Consensus 370 ~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 370 KLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred HHhccChhhhhccccchHHhh
Confidence 999999999998 55553
No 282
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.5e-34 Score=294.21 Aligned_cols=248 Identities=24% Similarity=0.382 Sum_probs=195.0
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.+.||+|+||.||+|... ++..+|+|++.... ......+.+|+++++.++|+||+++++.+...+..++|+||++++
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~ 84 (267)
T cd06610 5 LIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGG 84 (267)
T ss_pred eeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCC
Confidence 3578999999999999954 68899999987533 225678899999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++..... ...+++..+..++.|++.||+||| +.+++||||||+||++++++.++|+|||++......
T Consensus 85 ~l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh----~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 85 SLLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLH----SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred cHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 99999975431 235899999999999999999999 889999999999999999999999999998655432
Q ss_pred ------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 519 ------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 519 ------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
...++..|+|||.+... ..++.++|||||||++|||++|+.||...... +.+........
T Consensus 159 ~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~------------~~~~~~~~~~~- 224 (267)
T cd06610 159 TRKVRKTFVGTPCWMAPEVMEQV-HGYDFKADIWSFGITAIELATGAAPYSKYPPM------------KVLMLTLQNDP- 224 (267)
T ss_pred cccccccccCChhhcChHHHccc-cCcCcccchHhHhHHHHHHHhCCCCccccChh------------hhHHHHhcCCC-
Confidence 22467789999976532 46889999999999999999999999643211 11111111110
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+..............+.+++.+||+.||++||++.|+++
T Consensus 225 -----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 225 -----PSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred -----CCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 001000001123356778888999999999999999975
No 283
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2e-34 Score=296.48 Aligned_cols=239 Identities=20% Similarity=0.342 Sum_probs=192.7
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|++|.||++.. .+++.+|+|++........+.+.+|+.+++.++||||+++++++...++.++|+||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 36899999999999995 46899999998755444566788999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++... ++++..+..++.|++.||+||| +.+|+||||+|+||+++.++.++|+|||.+......
T Consensus 104 ~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 173 (285)
T cd06648 104 TDIVTHT------RMNEEQIATVCLAVLKALSFLH----AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK 173 (285)
T ss_pred HHHHHhC------CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccc
Confidence 9998752 3889999999999999999999 889999999999999999999999999988654332
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...++..|+|||.+. +..++.++|||||||++|||++|+.||.... ........... .. +
T Consensus 174 ~~~~~~~y~aPE~~~--~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~------------~~~~~~~~~~~-~~-----~ 233 (285)
T cd06648 174 SLVGTPYWMAPEVIS--RLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP------------PLQAMKRIRDN-LP-----P 233 (285)
T ss_pred cccCCccccCHHHhc--CCCCCCcccHHHHHHHHHHHHhCCCCCcCCC------------HHHHHHHHHhc-CC-----C
Confidence 234678899999754 4568899999999999999999999986431 12222222111 00 0
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.... .......+.+++.+||+.+|++||++.++++
T Consensus 234 ~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 234 KLKN---LHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CCcc---cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 0000 0112346788899999999999999999984
No 284
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=279.62 Aligned_cols=252 Identities=23% Similarity=0.343 Sum_probs=195.1
Q ss_pred cCHHHHHHHHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeE
Q 005880 355 FELEDLLRASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEK 431 (672)
Q Consensus 355 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~ 431 (672)
.++.|+ .....||.|..|.|++++.+ +|...|||.+.... .++.+++...++++.+-+ +|.||+.+|||..+...
T Consensus 89 ~dindl--~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV 166 (391)
T KOG0983|consen 89 ADINDL--ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDV 166 (391)
T ss_pred cChHHh--hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchH
Confidence 455555 45577999999999999965 58999999997643 345567777777766654 89999999999999999
Q ss_pred EEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCC
Q 005880 432 LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL 511 (672)
Q Consensus 432 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~ 511 (672)
++.||.| .-.++.+++.-. .++++..+=++...+.+||.||.+ .++|+|||+||+|||+|+.|++|+||||+
T Consensus 167 ~IcMelM-s~C~ekLlkrik----~piPE~ilGk~tva~v~AL~YLKe---KH~viHRDvKPSNILlDe~GniKlCDFGI 238 (391)
T KOG0983|consen 167 FICMELM-STCAEKLLKRIK----GPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGNIKLCDFGI 238 (391)
T ss_pred HHHHHHH-HHHHHHHHHHhc----CCchHHhhhhhHHHHHHHHHHHHH---hcceeecccCccceEEccCCCEEeecccc
Confidence 9999998 446777776554 468888888999999999999984 68999999999999999999999999999
Q ss_pred CccCCCC----CCCCCCcccCCCccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 512 SIFAPPS----TVPRSNGYRAPELSSSD-GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 512 a~~~~~~----~~~~t~~y~aPE~l~~~-~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
+-.+..+ ...|-+.|||||-+... ...|+.++||||||+.++||.||+.||..-.. + .+.+..+
T Consensus 239 sGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t----------d-Fe~ltkv 307 (391)
T KOG0983|consen 239 SGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT----------D-FEVLTKV 307 (391)
T ss_pred cceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc----------c-HHHHHHH
Confidence 9665443 44566779999976544 56788999999999999999999999975321 1 1222333
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..++. +.+.... .....+.+++..||.+|+.+||...++++
T Consensus 308 ln~eP------P~L~~~~---gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 308 LNEEP------PLLPGHM---GFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred HhcCC------CCCCccc---CcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 33221 1111111 13345778888999999999999999875
No 285
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.2e-34 Score=294.81 Aligned_cols=246 Identities=26% Similarity=0.403 Sum_probs=196.5
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
..+.||+|++|.||++... +++.||+|++..... ...+++.+|++++++++||||+++++++...+..++|+||++++
T Consensus 5 ~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (265)
T cd06605 5 YLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGG 84 (265)
T ss_pred HHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCC
Confidence 4567999999999999965 689999999876432 34567899999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS-LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
+|.+++.... .++++..+..++.|+++||+||| + .+++||||||+||++++++.++|+|||.+......
T Consensus 85 ~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH----~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 85 SLDKILKEVQ----GRIPERILGKIAVAVLKGLTYLH----EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred cHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHc----CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence 9999997543 45889999999999999999999 7 89999999999999999999999999998655322
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||.+. +..++.++||||||+++|+|++|+.||...... .....+.++........
T Consensus 157 ~~~~~~~~y~~PE~~~--~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~----- 222 (265)
T cd06605 157 KTFVGTSSYMAPERIQ--GNDYSVKSDIWSLGLSLIELATGRFPYPPENDP-------PDGIFELLQYIVNEPPP----- 222 (265)
T ss_pred hcccCChhccCHHHHc--CCCCCchhhHHHHHHHHHHHHhCCCCCCccccc-------cccHHHHHHHHhcCCCC-----
Confidence 355678899999764 457899999999999999999999999644211 11222222222221100
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .. ......+.+++.+||..+|++|||+.|++.
T Consensus 223 -~~--~~--~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 223 -RL--PS--GKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred -CC--Ch--hhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 00 00 113345788889999999999999999974
No 286
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.9e-35 Score=301.90 Aligned_cols=262 Identities=25% Similarity=0.335 Sum_probs=190.4
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++||||++++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 85 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHT 85 (286)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCcc
Confidence 478999999999999975 589999999864322 23567889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.++.... ..+++.++..++.|+++||+||| +.+++||||+|+||++++++.++|+|||++......
T Consensus 86 ~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH----~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07846 86 VLDDLEKYP-----NGLDESRVRKYLFQILRGIEFCH----SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 156 (286)
T ss_pred HHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccc
Confidence 998877543 23899999999999999999999 789999999999999999999999999998765432
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCC--CCCCChhHHHHHHHhhh-ccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGC--GGAVDLPRWVQSVVREE-WTA 593 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~ 593 (672)
...++..|+|||++.. ...++.++||||||+++|||++|++||......+.... .....+........... ...
T Consensus 157 ~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07846 157 YTDYVATRWYRAPELLVG-DTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA 235 (286)
T ss_pred cCcccceeeccCcHHhcc-ccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhh
Confidence 2345778999997643 34577899999999999999999999864321000000 00000000000000000 000
Q ss_pred cccchhhccccC----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMRYKD----IEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....+....... .......+.+++.+||+.+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000000000 0112346888999999999999999999875
No 287
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.8e-34 Score=299.89 Aligned_cols=244 Identities=19% Similarity=0.278 Sum_probs=193.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||++... +++.||+|.+..... .....+.+|++++..++||||+++++++..++..++||||+++
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g 85 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEG 85 (305)
T ss_pred eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCC
Confidence 478999999999999955 578999999875432 2345788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
++|.+++... ..+++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||+++....
T Consensus 86 ~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 86 GDCATLLKNI-----GALPVDMARMYFAETVLALEYLH----NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 9999999654 34899999999999999999999 78999999999999999999999999998863211
Q ss_pred -----------------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChh
Q 005880 518 -----------------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLP 580 (672)
Q Consensus 518 -----------------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~ 580 (672)
....++..|+|||.+. ...++.++|||||||++|||++|+.||.... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~vl~el~~g~~pf~~~~------------~~ 222 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVIL--RQGYGKPVDWWAMGIILYEFLVGCVPFFGDT------------PE 222 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhcc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------------HH
Confidence 0124567899999764 4578899999999999999999999996321 22
Q ss_pred HHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 581 RWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 581 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
++......... ..+.. . ......+.+++.+||+.||++||++.++.+.|+.
T Consensus 223 ~~~~~~~~~~~----~~~~~---~--~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 223 ELFGQVISDDI----EWPEG---D--EALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHHHHHhccc----CCCCc---c--ccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 22222222111 00000 0 1123357788889999999999998877777776
No 288
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.1e-34 Score=293.23 Aligned_cols=239 Identities=24% Similarity=0.363 Sum_probs=184.1
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc-----chHHHHHHHHHHHcCCCCCceeeeEEEEEc--CCeEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI-----GGKREFEQHMEVLGRLRHPNLVGLKAYYFA--REEKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 435 (672)
..+.||+|+||.||+|.. .+|..||+|++..... .....+.+|+.++++++||||+++++++.+ +...++++
T Consensus 6 ~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~ 85 (266)
T cd06651 6 RGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFM 85 (266)
T ss_pred ccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEE
Confidence 347899999999999995 4689999998864321 234568899999999999999999998875 35678999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+++++|.+++.... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 86 e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~LH----~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 86 EYMPGGSVKDQLKAYG-----ALTESVTRKYTRQILEGMSYLH----SNMIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred eCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 9999999999997542 4889999999999999999999 789999999999999999999999999998754
Q ss_pred CCC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 516 PPS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 516 ~~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
... ...++..|+|||.+. +..++.++|||||||++|||++|+.||.... ....+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~------------~~~~~~~~~ 222 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVIS--GEGYGRKADVWSLGCTVVEMLTEKPPWAEYE------------AMAAIFKIA 222 (266)
T ss_pred ccccccCCccccCCccccccCHHHhC--CCCCCchhhhHHHHHHHHHHHHCCCCccccc------------hHHHHHHHh
Confidence 321 234677899999764 5678899999999999999999999996321 111111111
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
... ..+.. .......+..++ +||..+|++||+++||++
T Consensus 223 ~~~-----~~~~~-----~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 223 TQP-----TNPQL-----PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred cCC-----CCCCC-----chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 110 01111 011122344455 688899999999999964
No 289
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4.4e-34 Score=292.73 Aligned_cols=239 Identities=26% Similarity=0.392 Sum_probs=192.3
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
..+.||+|+||.||+|.. .++..||+|.+.... ......+.+|++++.+++||||+++++++..++..++||||++++
T Consensus 8 ~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 87 (277)
T cd06641 8 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG 87 (277)
T ss_pred hheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCC
Confidence 457899999999999985 468999999886433 224567889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++... .+++..+..++.|++.|+.||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 88 ~l~~~i~~~------~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06641 88 SALDLLEPG------PLDETQIATILREILKGLDYLH----SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred cHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHc----cCCeecCCCCHHhEEECCCCCEEEeecccceecccchhh
Confidence 999998642 4889999999999999999999 789999999999999999999999999998765432
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||.+. +..++.++|||||||++|||++|..||.... ...+........ . ..+
T Consensus 158 ~~~~~~~~~y~~PE~~~--~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~------------~~~~~~~~~~~~-~-~~~ 221 (277)
T cd06641 158 RNTFVGTPFWMAPEVIK--QSAYDSKADIWSLGITAIELAKGEPPHSELH------------PMKVLFLIPKNN-P-PTL 221 (277)
T ss_pred hccccCCccccChhhhc--cCCCCchhhHHHHHHHHHHHHcCCCCCCccc------------hHHHHHHHhcCC-C-CCC
Confidence 234677899999654 4577889999999999999999999985321 111111111110 0 000
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
.......+.+++.+||+.+|.+||++.++++.
T Consensus 222 ---------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 222 ---------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ---------CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 01223457788889999999999999999984
No 290
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.2e-34 Score=298.57 Aligned_cols=251 Identities=24% Similarity=0.341 Sum_probs=187.7
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
..+.||+|+||.||++... +|+.||+|.+..... .....+.+|+.++.++. |+||+++++++..++..+++|||++
T Consensus 8 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~- 86 (288)
T cd06616 8 DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD- 86 (288)
T ss_pred HHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-
Confidence 3478999999999999954 689999999875432 34567889999999996 9999999999999999999999985
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
+++.++...........+++..+..++.|+++||+|||+ ..+|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 163 (288)
T cd06616 87 ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE---ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA 163 (288)
T ss_pred CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc
Confidence 465554321111112458999999999999999999992 258999999999999999999999999998754432
Q ss_pred --CCCCCCcccCCCccccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 --TVPRSNGYRAPELSSSDG-RKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~-~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++.... ..++.++|||||||++|||++|+.||.... ...+.+.......
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----------~~~~~~~~~~~~~----- 227 (288)
T cd06616 164 KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----------SVFDQLTQVVKGD----- 227 (288)
T ss_pred cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----------hHHHHHhhhcCCC-----
Confidence 345678899999765321 368899999999999999999999986321 1111111111110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.+.... ........++.+++.+||+.+|++|||+.||++
T Consensus 228 -~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 228 -PPILSN-SEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred -CCcCCC-cCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001100 110123446788899999999999999999975
No 291
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.2e-34 Score=291.38 Aligned_cols=240 Identities=25% Similarity=0.368 Sum_probs=191.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-----cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-----IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.+.||+|+||.||+|... ++..|++|.+.... ....+.+.+|++++++++|+||+++++++.+....++|+||+
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELV 84 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEec
Confidence 467999999999999976 78999999886433 123467899999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++++|.+++... .++++..+..++.|+++||+||| +.+|+|+||+|+||+++.++.+||+|||.+......
T Consensus 85 ~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 85 PGGSLAKLLKKY-----GSFPEPVIRLYTRQILLGLEYLH----DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 999999999754 24889999999999999999999 789999999999999999999999999998765432
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...++..|+|||.+... ..++.++||||||+++|+|++|+.||.... ................
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~-~~~~~~~D~~slG~~l~~l~~g~~pf~~~~------------~~~~~~~~~~~~~~~~ 222 (258)
T cd06632 156 SFAKSFKGSPYWMAPEVIAQQ-GGYGLAADIWSLGCTVLEMATGKPPWSQLE------------GVAAVFKIGRSKELPP 222 (258)
T ss_pred ccccccCCCcceeCHHHhcCC-CCCCchhhhHHHHHHHHHHHhCCCCcccCc------------HHHHHHHHHhcccCCC
Confidence 34467789999976432 248899999999999999999999986421 1111111111000000
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+ . ......+.+++.+||+.+|++||++.+++.
T Consensus 223 -~------~---~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 223 -I------P---DHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -c------C---CCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0 0 112245677888999999999999999974
No 292
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.3e-34 Score=297.71 Aligned_cols=192 Identities=27% Similarity=0.395 Sum_probs=163.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|++|.||+|+.. +|+.||||+++.... .....+.+|++++++++||||+++++++.+.+..++||||+. +
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~ 83 (284)
T cd07860 5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 83 (284)
T ss_pred eeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-c
Confidence 467999999999999964 689999999874322 234578899999999999999999999999999999999995 6
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|..++.... ...+++..+..++.|+++||+||| +.+++||||+|+||+++.++.+||+|||++......
T Consensus 84 ~l~~~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lh----~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 156 (284)
T cd07860 84 DLKKFMDASP---LSGIPLPLIKSYLFQLLQGLAFCH----SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 156 (284)
T ss_pred CHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc
Confidence 8988886543 245899999999999999999999 789999999999999999999999999998755432
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
...++..|+|||++.. ...++.++|||||||++|||+||+.||...
T Consensus 157 ~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 204 (284)
T cd07860 157 YTHEVVTLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGD 204 (284)
T ss_pred cccccccccccCCeEEec-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 2334678999997643 344688999999999999999999999643
No 293
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.9e-34 Score=301.06 Aligned_cols=253 Identities=21% Similarity=0.219 Sum_probs=189.3
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccC--CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDA--SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.+.+|.|+++.||++.. +|+.||||+++.. .....+.+.+|+++++.++|+||+++++++...+..+++|||+++|
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 445566666766666665 6899999998754 3335578999999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++..... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||.+......
T Consensus 85 ~l~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~LH----~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~ 157 (314)
T cd08216 85 SCEDLLKTHFP---EGLPELAIAFILKDVLNALDYIH----SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR 157 (314)
T ss_pred CHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCcceEEEecCCceEEecCccceeecccccc
Confidence 99999976432 34889999999999999999999 789999999999999999999999999988644221
Q ss_pred ---------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 519 ---------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 ---------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
...++..|+|||++......++.++|||||||++|||++|+.||....... ..... ...
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~-----------~~~~~-~~~ 225 (314)
T cd08216 158 QRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ-----------MLLEK-VRG 225 (314)
T ss_pred ccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH-----------HHHHH-Hhc
Confidence 233566799999876443568899999999999999999999997432110 00000 000
Q ss_pred hc---------------ccc----ccchhhc---cccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 590 EW---------------TAE----VFDLELM---RYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 590 ~~---------------~~~----~~d~~~~---~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. ... ..++... ...........+.+++.+||..||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 226 TVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 00 000 0000000 00011122346788999999999999999999985
No 294
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.1e-34 Score=299.78 Aligned_cols=244 Identities=25% Similarity=0.352 Sum_probs=191.6
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|++|.||+|... +++.||+|.+...... ..+.+.+|++++..++|+||+++++++.+.+..++||||+.+
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPG 85 (316)
T ss_pred eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCC
Confidence 467999999999999965 5899999999754332 446788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++.... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 86 ~~L~~~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 86 GELFRLLQRQP---GKCLSEEVARFYAAEVLLALEYLH----LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP 158 (316)
T ss_pred CCHHHHHHhCC---CCccCHHHHHHHHHHHHHHHHHHH----HCCeeccCCChHHeEEcCCCCEEEeecchhhccccccc
Confidence 99999987543 245899999999999999999999 789999999999999999999999999998644221
Q ss_pred --------------------------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 005880 519 --------------------------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDG 566 (672)
Q Consensus 519 --------------------------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~ 566 (672)
...++..|+|||++. +..++.++||||||+++|+|++|+.||....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS--GDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHc--CCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 124577899999764 5578899999999999999999999996432
Q ss_pred CCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 567 GGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
.. ........... ...........+.+++.+||+.||++||++...++.+.
T Consensus 237 ~~------------~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll 287 (316)
T cd05574 237 RD------------ETFSNILKKEV----------TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIK 287 (316)
T ss_pred hH------------HHHHHHhcCCc----------cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHH
Confidence 11 11111111110 01111113456888889999999999999444433333
No 295
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.8e-34 Score=293.16 Aligned_cols=244 Identities=27% Similarity=0.399 Sum_probs=192.7
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc--hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG--GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
..+.||+|+||.||+|... +++.||+|.++..... ..+.+.+|++++++++|+||+++++++...+..++|+||+++
T Consensus 4 ~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (264)
T cd06626 4 RGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSG 83 (264)
T ss_pred eeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCC
Confidence 3478999999999999954 6899999998755442 567899999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++... ..+++..+..++.|+++||+||| +.+|+||||+|+||++++++.+||+|||++......
T Consensus 84 ~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh----~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 84 GTLEELLEHG-----RILDEHVIRVYTLQLLEGLAYLH----SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CcHHHHHhhc-----CCCChHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 9999999753 24789999999999999999999 789999999999999999999999999998765432
Q ss_pred -------CCCCCCcccCCCccccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 519 -------TVPRSNGYRAPELSSSDG-RKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 519 -------~~~~t~~y~aPE~l~~~~-~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
...++..|+|||++.... ...+.++||||||+++||+++|+.||..... .......... .
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~-----------~~~~~~~~~~-~ 222 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN-----------EFQIMFHVGA-G 222 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc-----------hHHHHHHHhc-C
Confidence 234567899999775432 2378899999999999999999999963211 0011111110 0
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..+.. +........+.+++.+||+.+|.+|||+.|++.
T Consensus 223 -----~~~~~---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 223 -----HKPPI---PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred -----CCCCC---CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00011 111112345678888999999999999999864
No 296
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.6e-34 Score=296.68 Aligned_cols=191 Identities=24% Similarity=0.353 Sum_probs=162.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|++|.||+|..+ +++.||+|.+...... ....+.+|++++++++|+||+++++++.+.+..++||||++ ++
T Consensus 10 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~ 88 (291)
T cd07844 10 LDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-TD 88 (291)
T ss_pred EEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-CC
Confidence 468999999999999965 6899999998643321 23457789999999999999999999999999999999997 49
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ..+++.....++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 89 L~~~~~~~~----~~~~~~~~~~~~~ql~~al~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 160 (291)
T cd07844 89 LKQYMDDCG----GGLSMHNVRLFLFQLLRGLAYCH----QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY 160 (291)
T ss_pred HHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH----hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccc
Confidence 999887543 35889999999999999999999 789999999999999999999999999998654321
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
...++..|+|||++.. ...++.++||||+|+++|||++|+.||...
T Consensus 161 ~~~~~~~~~~aPE~~~~-~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 207 (291)
T cd07844 161 SNEVVTLWYRPPDVLLG-STEYSTSLDMWGVGCIFYEMATGRPLFPGS 207 (291)
T ss_pred cccccccccCCcHHhhc-CcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 2234678999997642 345788999999999999999999999643
No 297
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.8e-34 Score=293.44 Aligned_cols=253 Identities=24% Similarity=0.338 Sum_probs=193.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e~~~~ 440 (672)
.+.||.|++|.||+|... +++.+|+|.+..... ....++.+|++++++++||||+++++++.+. +..++||||+++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 85 (287)
T cd06621 6 LSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEG 85 (287)
T ss_pred EEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCC
Confidence 367999999999999964 589999999875332 3457789999999999999999999998654 367899999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++..... ....+++..+..++.|+++||+||| +.+++|+||+|+||++++++.++|+|||++......
T Consensus 86 ~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH----~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (287)
T cd06621 86 GSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLH----SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA 160 (287)
T ss_pred CCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence 999998764321 2245889999999999999999999 789999999999999999999999999998654432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||.+. +..++.++|||||||++|||++|+.||...... .....+......... ... +.
T Consensus 161 ~~~~~~~~y~~pE~~~--~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~-~~~-~~ 229 (287)
T cd06621 161 GTFTGTSFYMAPERIQ--GKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP-------PLGPIELLSYIVNMP-NPE-LK 229 (287)
T ss_pred ccccCCccccCHHHhc--CCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC-------CCChHHHHHHHhcCC-chh-hc
Confidence 344677899999654 567889999999999999999999999754221 011112222111111 000 00
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
... .........+.+++.+||+.+|++|||+.|+++
T Consensus 230 ~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 230 DEP---GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred cCC---CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 000 000112356788999999999999999999986
No 298
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.3e-34 Score=300.26 Aligned_cols=193 Identities=24% Similarity=0.285 Sum_probs=160.7
Q ss_pred cccCcC--CeEEEEEEEE-cCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKG--GFGTAYKAVL-DDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G--~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+| +||+||+++. .+|+.||+|++..... ...+.+.+|+.+++.++||||+++++++..++..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 346666 9999999996 4799999999874332 2346788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++..... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+......
T Consensus 84 ~~l~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~lH----~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~ 156 (328)
T cd08226 84 GSANSLLKTYFP---EGMSEALIGNILFGALRGLNYLH----QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ 156 (328)
T ss_pred CCHHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc
Confidence 999999876432 34889999999999999999999 789999999999999999999999999854322111
Q ss_pred ----------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 519 ----------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 519 ----------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
...++..|+|||++......++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~ 213 (328)
T cd08226 157 KAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDM 213 (328)
T ss_pred cccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 11234569999987544456789999999999999999999999643
No 299
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3.3e-34 Score=293.97 Aligned_cols=239 Identities=22% Similarity=0.325 Sum_probs=182.4
Q ss_pred ccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHH---HHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 367 MLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHME---VLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~---~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.||+|+||.||++... +|+.||+|.+...... ....+.+|.. ++...+||||+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999964 6899999988653221 2233444443 3344579999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||++++++.++|+|||++......
T Consensus 81 ~~~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH----~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~ 151 (279)
T cd05633 81 GGDLHYHLSQH-----GVFSEKEMRFYATEIILGLEHMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 151 (279)
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC
Confidence 99999998744 34899999999999999999999 789999999999999999999999999998755432
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||.+.. +..++.++|||||||++|||++|+.||....... . ......... .
T Consensus 152 ~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---------~-~~~~~~~~~------~ 214 (279)
T cd05633 152 PHASVGTHGYMAPEVLQK-GTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---------K-HEIDRMTLT------V 214 (279)
T ss_pred ccCcCCCcCccCHHHhcC-CCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC---------H-HHHHHHhhc------C
Confidence 3457889999997542 3567899999999999999999999996542211 1 111111100 0
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 636 (672)
.... .......+.+++.+||+.||++|| +++|+++
T Consensus 215 ~~~~-----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 215 NVEL-----PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred CcCC-----ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 0000 011234577888899999999999 5888765
No 300
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=336.73 Aligned_cols=240 Identities=29% Similarity=0.406 Sum_probs=190.6
Q ss_pred hcccCcCCeEEEEEEE-EcCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.+||.|.||.||-|. .++|...|||.++-.. ........+|+.++..++|||+|+++|+-.+++..+|.||||++|
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence 4689999999999999 6679999999886432 223457789999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+.+...+ -.++.....+..|++.|++||| +++||||||||.||+++.+|.+|++|||.|..+...
T Consensus 1320 sLa~ll~~gr-----i~dE~vt~vyt~qll~gla~LH----~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~ 1390 (1509)
T KOG4645|consen 1320 SLASLLEHGR-----IEDEMVTRVYTKQLLEGLAYLH----EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQT 1390 (1509)
T ss_pred cHHHHHHhcc-----hhhhhHHHHHHHHHHHHHHHHH----hcCceecCCCccceeeecCCcEEeecccceeEecCchhc
Confidence 9999998654 2566667788999999999999 899999999999999999999999999999877653
Q ss_pred ------CCCCCCcccCCCccccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 519 ------TVPRSNGYRAPELSSSDG-RKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 519 ------~~~~t~~y~aPE~l~~~~-~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
...||+.|||||++.... ....-++||||+|||+.||+||+.||...+. +|.-...-.
T Consensus 1391 ~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-------------e~aIMy~V~-- 1455 (1509)
T KOG4645|consen 1391 MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-------------EWAIMYHVA-- 1455 (1509)
T ss_pred CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-------------hhHHHhHHh--
Confidence 456899999999987543 4456789999999999999999999964322 121111100
Q ss_pred cccccchhhccccCh-HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 TAEVFDLELMRYKDI-EEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~-~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....+.+ +....+=.+++..|+..||+.|.++.|+++
T Consensus 1456 --------~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1456 --------AGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred --------ccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 0000111 112223445666999999999999887653
No 301
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.4e-34 Score=300.44 Aligned_cols=196 Identities=24% Similarity=0.392 Sum_probs=163.9
Q ss_pred hcccCcCCeEEEEEEEEc---CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVLD---DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 436 (672)
.+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++.+++||||+++++++.+. ...++|||
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 84 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFD 84 (316)
T ss_pred EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEe
Confidence 467999999999999964 47999999998633 23346778899999999999999999999988 78999999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC----CCcEEEeccCCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK----TGNARVSDFGLS 512 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~----~~~~kl~DfG~a 512 (672)
|+++ +|.+++..........+++..++.++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 85 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 85 YAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH----SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred CCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH----hCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9965 7777775443323346899999999999999999999 889999999999999999 899999999998
Q ss_pred ccCCCC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 005880 513 IFAPPS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDG 566 (672)
Q Consensus 513 ~~~~~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~ 566 (672)
+..... ...++..|+|||++.. ...++.++|||||||++|||++|++||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 220 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLG-ARHYTKAIDIWAIGCIFAELLTLEPIFKGRE 220 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhC-CCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence 765332 2345778999997542 3467899999999999999999999997654
No 302
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.6e-34 Score=294.86 Aligned_cols=240 Identities=25% Similarity=0.421 Sum_probs=194.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|++|.||+|... ++..||+|++..... ..+.+.+|++++++++|+||+++++++...+..++|+||+++++|
T Consensus 24 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 102 (286)
T cd06614 24 LEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSL 102 (286)
T ss_pred hHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcH
Confidence 467999999999999976 689999999976544 567889999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++.... ..+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 103 ~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH----~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 174 (286)
T cd06614 103 TDIITQNF----VRMNEPQIAYVCREVLQGLEYLH----SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRN 174 (286)
T ss_pred HHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhc
Confidence 99998643 36999999999999999999999 789999999999999999999999999988654432
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...++..|+|||.+. +..++.++|||||||++|+|++|+.||..... ........... ...
T Consensus 175 ~~~~~~~y~~PE~~~--~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~------------~~~~~~~~~~~-~~~---- 235 (286)
T cd06614 175 SVVGTPYWMAPEVIK--RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP------------LRALFLITTKG-IPP---- 235 (286)
T ss_pred cccCCcccCCHhHhc--CCCCCCccccHHHHHHHHHHHhCCCCCCCCCH------------HHHHHHHHhcC-CCC----
Confidence 334567899999764 45688999999999999999999999864321 11111111111 000
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..........+.+++.+||+.+|.+||++.++++
T Consensus 236 ----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 236 ----LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred ----CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0111112346778899999999999999999975
No 303
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.3e-34 Score=297.05 Aligned_cols=238 Identities=21% Similarity=0.356 Sum_probs=191.2
Q ss_pred cccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
.+||+|+||.||++.. .+|+.||||++..........+.+|+.+++.++|+||+++++++..++..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 6799999999999986 468999999986554445677899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----C
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-----T 519 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-----~ 519 (672)
+++... .+++..+..++.|++.||+||| +.+++||||+|+||++++++.++|+|||++...... .
T Consensus 106 ~~~~~~------~~~~~~~~~~~~ql~~~l~~lH----~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~ 175 (292)
T cd06657 106 DIVTHT------RMNEEQIAAVCLAVLKALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 175 (292)
T ss_pred HHHhcC------CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccc
Confidence 987532 3789999999999999999999 789999999999999999999999999988655332 2
Q ss_pred CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchh
Q 005880 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLE 599 (672)
Q Consensus 520 ~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (672)
..++..|+|||.+. +..++.++||||||+++|||++|+.||.... ..+.+... .... ...
T Consensus 176 ~~~~~~y~~pE~~~--~~~~~~~~Dv~slGvil~el~tg~~p~~~~~------------~~~~~~~~-~~~~-----~~~ 235 (292)
T cd06657 176 LVGTPYWMAPELIS--RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------------PLKAMKMI-RDNL-----PPK 235 (292)
T ss_pred cccCccccCHHHhc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHH-HhhC-----Ccc
Confidence 44678899999653 4567899999999999999999999986431 11111111 1110 001
Q ss_pred hccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 600 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. ........+.+++.+||+.+|.+||++.++++
T Consensus 236 ~~---~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 236 LK---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred cC---CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 10 11112335677888999999999999999886
No 304
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.3e-34 Score=295.62 Aligned_cols=245 Identities=24% Similarity=0.361 Sum_probs=187.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHH-HcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEV-LGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|+.. +|+.||+|+++.... ....++..|+.+ ++.++||||+++++++..++..++||||++ |
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (283)
T cd06617 6 IEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-T 84 (283)
T ss_pred EEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-c
Confidence 467999999999999965 699999999875432 234556666665 566789999999999999999999999996 6
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCC-CcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL-KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
+|.+++..... ....+++..++.++.|++.||+||| +. +++||||||+||+++.++.+||+|||++......
T Consensus 85 ~l~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH----~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (283)
T cd06617 85 SLDKFYKKVYD-KGLTIPEDILGKIAVSIVKALEYLH----SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA 159 (283)
T ss_pred cHHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHh----hcCCeecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 89888865432 2256899999999999999999999 65 8999999999999999999999999998765432
Q ss_pred --CCCCCCcccCCCccccC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 --TVPRSNGYRAPELSSSD--GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~--~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...++..|+|||.+... ...++.++|||||||++|||++|+.||..... . .+.........
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----------~-~~~~~~~~~~~---- 224 (283)
T cd06617 160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT----------P-FQQLKQVVEEP---- 224 (283)
T ss_pred cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc----------C-HHHHHHHHhcC----
Confidence 24467789999976431 14568899999999999999999999853211 1 11111111110
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.+.... .....++.+++.+||..+|++||++.++++
T Consensus 225 --~~~~~~----~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 225 --SPQLPA----EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred --CCCCCc----cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000 112345788889999999999999999975
No 305
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=5.8e-34 Score=294.09 Aligned_cols=190 Identities=26% Similarity=0.366 Sum_probs=159.7
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|... +|..||+|++..... .....+.+|+++++.++|+||+++++++..++..++||||+. ++
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~ 88 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TD 88 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CC
Confidence 367999999999999854 689999999865432 234567889999999999999999999999999999999995 67
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ..+.+..+..++.|+++||+||| +.+|+||||||+||+++.++++||+|||+++.....
T Consensus 89 l~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 160 (291)
T cd07870 89 LAQYMIQHP----GGLHPYNVRLFMFQLLRGLAYIH----GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY 160 (291)
T ss_pred HHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC
Confidence 777765432 34788889999999999999999 789999999999999999999999999998754322
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
...++..|+|||++.. ...++.++|||||||++|||++|+.||..
T Consensus 161 ~~~~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~~l~~l~~g~~~f~~ 206 (291)
T cd07870 161 SSEVVTLWYRPPDVLLG-ATDYSSALDIWGAGCIFIEMLQGQPAFPG 206 (291)
T ss_pred CCccccccccCCceeec-CCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2345778999997642 23578899999999999999999999964
No 306
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3e-34 Score=292.31 Aligned_cols=242 Identities=24% Similarity=0.411 Sum_probs=191.0
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc------chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI------GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.||+|++|.||+|.. .+++.||+|.++.... ...+.+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~ 84 (268)
T cd06630 5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEW 84 (268)
T ss_pred cceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEec
Confidence 46799999999999994 5789999999864321 1246789999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC-cEEEeccCCCccCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG-NARVSDFGLSIFAP 516 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~-~~kl~DfG~a~~~~ 516 (672)
+++++|.+++... .++++..+..++.|++.||+||| +.+++||||||+||+++.++ .+||+|||.+....
T Consensus 85 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~ql~~al~~LH----~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 85 MAGGSVSHLLSKY-----GAFKEAVIINYTEQLLRGLSYLH----ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred cCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 9999999999753 35889999999999999999999 88999999999999998776 59999999987654
Q ss_pred CC---------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 517 PS---------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 517 ~~---------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
.. ...++..|+|||++. +..++.++||||+|+++|+|++|+.||...... ..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~--~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---------~~~~~~~~~~ 224 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLR--GEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS---------NHLALIFKIA 224 (268)
T ss_pred cccccCCccccccccccceeCHhHhc--cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc---------chHHHHHHHh
Confidence 32 234577899999764 457789999999999999999999999643211 1111111111
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... + .........+.+++.+|+..+|.+||++.|+++
T Consensus 225 ~~~~~-----~-----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 225 SATTA-----P-----SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ccCCC-----C-----CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 11000 0 011223356788899999999999999999974
No 307
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=4.8e-34 Score=295.00 Aligned_cols=193 Identities=26% Similarity=0.367 Sum_probs=163.2
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc--hHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEEee
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG--GKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVSEY 437 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e~ 437 (672)
...+.||+|+||.||+|... +++.+|+|.++..... ....+.+|++++.+++||||+++++++... ...++||||
T Consensus 8 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~ 87 (293)
T cd07843 8 EKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEY 87 (293)
T ss_pred hhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehh
Confidence 34578999999999999965 5899999998743322 234677899999999999999999999877 889999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
++ ++|.+++.... ..+++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 88 ~~-~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH----~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 88 VE-HDLKSLMETMK----QPFLQSEVKCLMLQLLSGVAHLH----DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred cC-cCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 96 59999887543 35899999999999999999999 78999999999999999999999999999876544
Q ss_pred C-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 518 S-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 518 ~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
. ...++..|+|||.+.. ...++.++||||||+++|||++|+.||...
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~~Di~slG~~l~~l~~g~~~f~~~ 210 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLG-AKEYSTAIDMWSVGCIFAELLTKKPLFPGK 210 (293)
T ss_pred CccccccccccccccCchhhcC-CccccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 3 2345678999997643 234688999999999999999999999643
No 308
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=6e-34 Score=289.17 Aligned_cols=246 Identities=24% Similarity=0.327 Sum_probs=193.0
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEc--CCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFA--REEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||++.. .+|..||+|.++... ....+++.+|++++++++||||+++++++.. ....+++|||++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~ 84 (265)
T cd08217 5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCE 84 (265)
T ss_pred eeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhcc
Confidence 46799999999999995 468999999987433 2345678899999999999999999998864 346789999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC-CCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC-KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
+++|.+++..... ...++++..++.++.|+++||+|||..+ .+.+++||||||+||++++++.+||+|||++......
T Consensus 85 ~~~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 163 (265)
T cd08217 85 GGDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHD 163 (265)
T ss_pred CCCHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCC
Confidence 9999999975432 2356899999999999999999999332 1368999999999999999999999999999876543
Q ss_pred -----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
...++..|+|||.+. +..++.++||||||+++|+|++|+.||.... ......... .....
T Consensus 164 ~~~~~~~~~~~~~~~pE~~~--~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------------~~~~~~~~~-~~~~~ 228 (265)
T cd08217 164 SSFAKTYVGTPYYMSPEQLN--HMSYDEKSDIWSLGCLIYELCALSPPFTARN------------QLQLASKIK-EGKFR 228 (265)
T ss_pred cccccccccCCCccChhhhc--CCCCCchhHHHHHHHHHHHHHHCCCcccCcC------------HHHHHHHHh-cCCCC
Confidence 235678899999764 4568899999999999999999999996432 112222111 11100
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.........+.+++.+|++.+|++||++.+|++
T Consensus 229 ----------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 229 ----------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred ----------CCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 001123356788899999999999999999986
No 309
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.1e-34 Score=294.46 Aligned_cols=260 Identities=20% Similarity=0.209 Sum_probs=187.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCC-CCceeeeEEEEEcC--CeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLR-HPNLVGLKAYYFAR--EEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|... +++.||+|+++.... .......+|+.++.++. |+||+++++++.+. +..++|+||++
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 83 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD 83 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC
Confidence 467999999999999954 689999999875422 22334557888888885 99999999999987 88999999996
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
|+|.+.+.... ..+++.++..++.|++.||+||| +.+++||||||+||+++. +.+||+|||+++.....
T Consensus 84 -~~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH----~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 84 -MNLYELIKGRK----RPLPEKRVKSYMYQLLKSLDHMH----RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred -ccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH----HCCceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 58888886533 35899999999999999999999 789999999999999999 99999999999765432
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCChhHHHHHHHhhhcc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG---CGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 592 (672)
...++..|+|||++.. +..++.++|||||||++|||++|+.||......+... ...+.....|... ......
T Consensus 154 ~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 231 (282)
T cd07831 154 PYTEYISTRWYRAPECLLT-DGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKK-FRKSRH 231 (282)
T ss_pred CcCCCCCCcccCChhHhhc-CCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHh-hccccc
Confidence 3346778999996543 3467889999999999999999999996542111000 0000001111110 000000
Q ss_pred ccccchhhcc---ccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 593 AEVFDLELMR---YKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 593 ~~~~d~~~~~---~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.....+.... ..........+.+++.+||+.+|++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000000000 0000123467889999999999999999999975
No 310
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=7.1e-34 Score=289.18 Aligned_cols=238 Identities=23% Similarity=0.297 Sum_probs=184.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-----cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-----IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 436 (672)
.+.||+|+||.||+|... +|..||||.+.... ....+.+.+|++++++++||||+++++++.+. ...++|||
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFME 86 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEE
Confidence 478999999999999964 58999999875321 12245788899999999999999999988764 45779999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|+++++|.+++... ..+++....+++.|++.||+||| +.+|+||||||+||+++.++.++|+|||+++...
T Consensus 87 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 87 HMPGGSIKDQLKSY-----GALTENVTRKYTRQILEGVSYLH----SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred ecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 99999999998743 24788999999999999999999 7899999999999999999999999999987543
Q ss_pred C--------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 517 P--------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 517 ~--------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
. ....++..|+|||++. +..++.++|||||||++|||++|+.||..... ..-+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------------~~~~~~~~~ 223 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVIS--GEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA------------MAAIFKIAT 223 (265)
T ss_pred cccccccccccCCCCccccChhhhc--CCCCCcchhHHHHHHHHHHHhhCCCCCCccch------------HHHHHHHhc
Confidence 2 1234677899999764 45688999999999999999999999863210 111111111
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. ..+ .........+.+++.+|+. +|++||+++|+++
T Consensus 224 ~~-----~~~-----~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 224 QP-----TNP-----VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred CC-----CCC-----CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 00 000 0112223456677778884 9999999999874
No 311
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=8e-34 Score=288.31 Aligned_cols=244 Identities=25% Similarity=0.400 Sum_probs=196.8
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
..+.||+|++|.||+|+.. +++.||||++..... .....+.+|++.+.+++|+||+++++++...+..++||||++++
T Consensus 5 ~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (264)
T cd06623 5 RVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGG 84 (264)
T ss_pred eeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCC
Confidence 3478999999999999966 589999999876543 35678999999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS-LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
+|.+++... .++++..++.++.|+++||+||| + .+++||||+|+||+++.++.++|+|||.+......
T Consensus 85 ~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh----~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 85 SLADLLKKV-----GKIPEPVLAYIARQILKGLDYLH----TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHh----ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 999999754 35899999999999999999999 7 89999999999999999999999999998766543
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||.+. +..++.++||||||+++|||+||+.||..... ....+..........
T Consensus 156 ~~~~~~~~~~y~~pE~~~--~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~---------~~~~~~~~~~~~~~~---- 220 (264)
T cd06623 156 QCNTFVGTVTYMSPERIQ--GESYSYAADIWSLGLTLLECALGKFPFLPPGQ---------PSFFELMQAICDGPP---- 220 (264)
T ss_pred cccceeecccccCHhhhC--CCCCCchhhHHHHHHHHHHHHhCCCCCccccc---------cCHHHHHHHHhcCCC----
Confidence 234567899999654 45788999999999999999999999965421 011222222221110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
+... . ......+.+++.+||+.+|++||++.|+++.
T Consensus 221 --~~~~--~--~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 --PSLP--A--EEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --CCCC--c--ccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000 0 0033467888889999999999999999863
No 312
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=5.8e-34 Score=292.74 Aligned_cols=256 Identities=23% Similarity=0.295 Sum_probs=190.1
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
..+.||+|++|.||+|... +|..||+|++.... ......+.+|++++++++|||++++++++.+.+..++||||++
T Consensus 3 ~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~- 81 (283)
T cd07835 3 KVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD- 81 (283)
T ss_pred hheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-
Confidence 3478999999999999954 79999999987433 2234678899999999999999999999999999999999995
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++..... ..+++..+..++.|+++||+||| +.+++||||+|+||+++.++.++|+|||++......
T Consensus 82 ~~l~~~~~~~~~---~~~~~~~~~~~~~~i~~~L~~lH----~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 82 LDLKKYMDSSPL---TGLDPPLIKSYLYQLLQGIAYCH----SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred cCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 689999875431 35899999999999999999999 789999999999999999999999999998755322
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH--------
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV-------- 587 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 587 (672)
...++..|+|||++.. +..++.++||||||+++|||++|+.||....... .+...+....
T Consensus 155 ~~~~~~~~~~~~aPE~~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--------~~~~~~~~~~~~~~~~~~ 225 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLG-SRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID--------QLFRIFRTLGTPDEDVWP 225 (283)
T ss_pred ccCccccccCCCCCceeec-CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHHHhCCCChHHhh
Confidence 2234678999997643 3456889999999999999999999996432110 0000000000
Q ss_pred ----hhhccccccchhhcc-ccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 588 ----REEWTAEVFDLELMR-YKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 588 ----~~~~~~~~~d~~~~~-~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..+............ ..........+.+++.+|++.||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 226 GVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000000000000 0000111245778999999999999999999974
No 313
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=9.4e-34 Score=285.21 Aligned_cols=241 Identities=28% Similarity=0.451 Sum_probs=196.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|++|.||++... ++..+++|++..........+.+|++++++++|+|++++++++..+...++++||+++++|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L 84 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSL 84 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcH
Confidence 467999999999999975 6899999999866555667899999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----C
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----T 519 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----~ 519 (672)
.+++.... ..+++..+..++.|+++||+||| +.+++||||+|+||++++++.++|+|||.+...... .
T Consensus 85 ~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh----~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 156 (253)
T cd05122 85 KDLLKSTN----QTLTESQIAYVCKELLKGLEYLH----SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT 156 (253)
T ss_pred HHHHhhcC----CCCCHHHHHHHHHHHHHHHHHhh----cCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccc
Confidence 99987643 45899999999999999999999 789999999999999999999999999998776543 3
Q ss_pred CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchh
Q 005880 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLE 599 (672)
Q Consensus 520 ~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (672)
..++..|+|||.+. +..++.++||||||+++|+|++|+.||.... .......... ......
T Consensus 157 ~~~~~~~~~PE~~~--~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------------~~~~~~~~~~-~~~~~~---- 217 (253)
T cd05122 157 MVGTPYWMAPEVIN--GKPYDYKADIWSLGITAIELAEGKPPYSELP------------PMKALFKIAT-NGPPGL---- 217 (253)
T ss_pred eecCCcccCHHHHc--CCCCCccccHHHHHHHHHHHHhCCCCCCCCc------------hHHHHHHHHh-cCCCCc----
Confidence 45677899999764 4458899999999999999999999986431 1111111111 100010
Q ss_pred hccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 600 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.........+.+++.+||+.||++|||+.|+++
T Consensus 218 ----~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 218 ----RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ----CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000111346788899999999999999999975
No 314
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.3e-34 Score=294.90 Aligned_cols=237 Identities=23% Similarity=0.323 Sum_probs=189.9
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
+.+.||+|+||.||++... +++.||+|.++... ......+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 5 ~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (290)
T cd05580 5 FIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVP 84 (290)
T ss_pred EEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCC
Confidence 3478999999999999965 68999999986532 2234678899999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+++|.+++... ..+++..+..++.|+++||+||| +.+|+||||+|+||+++.++.+||+|||++......
T Consensus 85 ~~~L~~~~~~~-----~~l~~~~~~~~~~qil~~l~~lH----~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 155 (290)
T cd05580 85 GGELFSHLRKS-----GRFPEPVARFYAAQVVLALEYLH----SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT 155 (290)
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCC
Confidence 99999999754 35899999999999999999999 789999999999999999999999999999776544
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||.+. +...+.++||||||+++|+|++|+.||.... ............
T Consensus 156 ~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------------~~~~~~~~~~~~------- 214 (290)
T cd05580 156 YTLCGTPEYLAPEIIL--SKGYGKAVDWWALGILIYEMLAGYPPFFDDN------------PIQIYEKILEGK------- 214 (290)
T ss_pred CCCCCCccccChhhhc--CCCCCccccHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHhcCC-------
Confidence 345678899999664 4567889999999999999999999986432 111111111111
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVV 635 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl 635 (672)
...... ....+.+++.+||..||.+|| +++|++
T Consensus 215 --~~~~~~---~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 215 --VRFPSF---FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred --ccCCcc---CCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 000111 123567888899999999999 555554
No 315
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.2e-34 Score=289.25 Aligned_cols=240 Identities=26% Similarity=0.399 Sum_probs=192.5
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++|+||+++++++......++|+||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGG 84 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCC
Confidence 467999999999999965 58899999986432 234567889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC-cEEEeccCCCccCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG-NARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~-~~kl~DfG~a~~~~~~-- 518 (672)
+|.+++.... ...+++..+..++.|+++||+||| +.+++|+||||+||++++++ .+||+|||.+......
T Consensus 85 ~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 85 DLMKRINRQR---GVLFSEDQILSWFVQISLGLKHIH----DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred cHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 9999997543 235799999999999999999999 78999999999999999886 4699999998766443
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||... +..+++........
T Consensus 158 ~~~~~~~~~~~~ape~~~--~~~~~~~~Dv~slG~il~~l~~g~~p~~~~------------~~~~~~~~~~~~~~---- 219 (257)
T cd08225 158 LAYTCVGTPYYLSPEICQ--NRPYNNKTDIWSLGCVLYELCTLKHPFEGN------------NLHQLVLKICQGYF---- 219 (257)
T ss_pred cccccCCCccccCHHHHc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCc------------cHHHHHHHHhcccC----
Confidence 234677899999654 457889999999999999999999998532 23333333222211
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.+. . ......+.+++.+|+..+|++|||+.|+++
T Consensus 220 -~~~---~---~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 220 -API---S---PNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -CCC---C---CCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 100 0 112235778888999999999999999975
No 316
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.5e-34 Score=295.46 Aligned_cols=254 Identities=22% Similarity=0.256 Sum_probs=188.3
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCe-----EEEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREE-----KLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~-----~~lv~ 435 (672)
.+.||+|+||.||+|... +|+.||||.++.... .....+.+|+.+++.++ ||||+++++++...+. .++||
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~ 85 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVF 85 (295)
T ss_pred eeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEe
Confidence 467999999999999965 689999998764322 23467888999999995 6999999999887665 79999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-CCcEEEeccCCCcc
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK-TGNARVSDFGLSIF 514 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~-~~~~kl~DfG~a~~ 514 (672)
||+++ +|.+++..........+++..++.++.|+++||+||| +.+|+||||||+||+++. ++.+||+|||+++.
T Consensus 86 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH----~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 86 EYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH----KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred eccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 99975 8988887544322356899999999999999999999 789999999999999998 88999999999875
Q ss_pred CCCC-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 515 APPS-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 515 ~~~~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
.... ...++..|+|||++.. ...++.++||||||+++|||++|..||..... ..........
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~------------~~~~~~~~~~ 227 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLG-STHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE------------LQQLLHIFKL 227 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhC-CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH------------HHHHHHHHHH
Confidence 5332 2245678999997642 34578999999999999999999999964321 1111111110
Q ss_pred hc--ccccc----chh----hc--ccc----ChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 590 EW--TAEVF----DLE----LM--RYK----DIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 590 ~~--~~~~~----d~~----~~--~~~----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
-. ..... +.. .. ... .......++.+++.+||..||.+||++.|++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 228 LGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 00000 000 00 000 00112345788999999999999999999874
No 317
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=9.2e-34 Score=287.80 Aligned_cols=232 Identities=24% Similarity=0.344 Sum_probs=187.7
Q ss_pred cCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 368 LGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 368 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
||+|++|.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999965 589999999875332 2456789999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----C
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----T 519 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----~ 519 (672)
.+++.... .+++..+..++.|+++||+||| +.+++|+||+|+||+++.++.++|+|||++...... .
T Consensus 81 ~~~l~~~~-----~l~~~~~~~~~~~i~~~l~~lH----~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~ 151 (262)
T cd05572 81 WTILRDRG-----LFDEYTARFYIACVVLAFEYLH----NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWT 151 (262)
T ss_pred HHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccccccc
Confidence 99997542 4889999999999999999999 789999999999999999999999999999766543 3
Q ss_pred CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchh
Q 005880 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLE 599 (672)
Q Consensus 520 ~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (672)
..++..|+|||.+. +..++.++||||||+++|||++|+.||..... +..+...........
T Consensus 152 ~~~~~~~~~PE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----------~~~~~~~~~~~~~~~------- 212 (262)
T cd05572 152 FCGTPEYVAPEIIL--NKGYDFSVDYWSLGILLYELLTGRPPFGEDDE----------DPMEIYNDILKGNGK------- 212 (262)
T ss_pred ccCCcCccChhHhc--CCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC----------CHHHHHHHHhccCCC-------
Confidence 45678899999754 45688999999999999999999999975421 122233322211100
Q ss_pred hccccChHHHHHHHHHHHHhccCCCCCCCCC
Q 005880 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPN 630 (672)
Q Consensus 600 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 630 (672)
. ..+ ......+.+++.+||+.+|++||+
T Consensus 213 ~-~~~--~~~~~~~~~~i~~~l~~~p~~R~~ 240 (262)
T cd05572 213 L-EFP--NYIDKAAKDLIKQLLRRNPEERLG 240 (262)
T ss_pred C-CCC--cccCHHHHHHHHHHccCChhhCcC
Confidence 0 001 111346888999999999999999
No 318
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=3e-36 Score=282.38 Aligned_cols=251 Identities=23% Similarity=0.345 Sum_probs=193.7
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcC-CCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGR-LRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
..||.|+||+|+|-..+ .|+..|||+++.... .+.+++..|.+...+ -+.||||+++|.++.++..|+.||.| ..+
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d~S 148 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-DIS 148 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-hhh
Confidence 57999999999999854 699999999986554 466788888886544 47999999999999999999999999 446
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|+.+-+.-..-....+++...-.|+...++||.||.+ ..+|||||+||+|||++..|.+||||||++-.+..+
T Consensus 149 lDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~---~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT 225 (361)
T KOG1006|consen 149 LDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE---ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKT 225 (361)
T ss_pred HHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH---HhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhh
Confidence 6544322111123458889899999999999999985 478999999999999999999999999998665543
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...|-..|||||-+...+..|+.++||||+|++|||+.||+.|+..- .+..+.+..+.......-..+.
T Consensus 226 ~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w-----------~svfeql~~Vv~gdpp~l~~~~ 294 (361)
T KOG1006|consen 226 VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW-----------DSVFEQLCQVVIGDPPILLFDK 294 (361)
T ss_pred hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH-----------HHHHHHHHHHHcCCCCeecCcc
Confidence 44567789999988766667999999999999999999999998532 2233333333333322111111
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
...+....+..++..|+.+|-..||...++.+.
T Consensus 295 ------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 295 ------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred ------cccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 112234568888889999999999999998653
No 319
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=6.4e-34 Score=296.17 Aligned_cols=243 Identities=27% Similarity=0.394 Sum_probs=190.6
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccC---CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA---SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
..+.||+|+||.||+|+.. ++..||+|.+... .....+++.+|+++++.++|+|++++++++......++||||+.
T Consensus 19 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 98 (308)
T cd06634 19 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 98 (308)
T ss_pred HHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC
Confidence 4577999999999999954 6789999988642 22234578889999999999999999999999999999999996
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
|++.+++.... .++++.++..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 99 -~~l~~~~~~~~----~~l~~~~~~~~~~~l~~~l~~LH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 169 (308)
T cd06634 99 -GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLH----SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 169 (308)
T ss_pred -CCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHhEEECCCCcEEECCcccceeecCcc
Confidence 68887775432 35899999999999999999999 789999999999999999999999999998765543
Q ss_pred CCCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 TVPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||.+.. ....++.++|||||||++|||++|+.||..... ............
T Consensus 170 ~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------------~~~~~~~~~~~~------ 231 (308)
T cd06634 170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------------MSALYHIAQNES------ 231 (308)
T ss_pred cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH------------HHHHHHHhhcCC------
Confidence 4557789999997642 234578899999999999999999999854211 111111111110
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
+... .......+.+++.+||+.+|++||++.++++.
T Consensus 232 ~~~~----~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 232 PALQ----SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred CCcC----cccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 0000 01233457788899999999999999999865
No 320
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.4e-34 Score=294.33 Aligned_cols=263 Identities=23% Similarity=0.291 Sum_probs=190.6
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
..+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++|+||+++++++..++..++||||+++
T Consensus 5 ~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~ 84 (288)
T cd07833 5 VLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVER 84 (288)
T ss_pred EEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCC
Confidence 3467999999999999965 58899999987432 23457889999999999999999999999999999999999998
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
+.+..+.... ..+++.++..++.|+++||+||| +.+++||||+|+||++++++.+||+|||++......
T Consensus 85 ~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 85 TLLELLEASP-----GGLPPDAVRSYIWQLLQAIAYCH----SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 7776665432 34899999999999999999999 789999999999999999999999999998765443
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCChhHHHHHHHhhhc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG---CGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 591 (672)
...++..|+|||++.. ...++.++||||||+++|+|++|+.||......+... ...+.....+.........
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~-~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVG-DTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred ccccCcccccCCcCCchhcC-CCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcc
Confidence 2345678999997653 2377899999999999999999999986432110000 0000000000000000000
Q ss_pred cc-----cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 TA-----EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 ~~-----~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. ...+..............++.+++.+||..+|++||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00 0000000000000112456889999999999999999999874
No 321
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.3e-33 Score=286.48 Aligned_cols=243 Identities=21% Similarity=0.273 Sum_probs=186.6
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHH-cCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVL-GRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|... +|+.||||+++..... ....+..|..++ ...+|+|++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999964 6899999998754322 223344555444 455899999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC-CC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-ST 519 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-~~ 519 (672)
++|.+++... ..+++..+..++.|+++||.||| +.+++||||+|+||++++++.+||+|||+++.... ..
T Consensus 82 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 152 (260)
T cd05611 82 GDCASLIKTL-----GGLPEDWAKQYIAEVVLGVEDLH----QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKK 152 (260)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCcEEEeecccceecccccc
Confidence 9999999754 24889999999999999999999 78999999999999999999999999999876543 24
Q ss_pred CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchh
Q 005880 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLE 599 (672)
Q Consensus 520 ~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (672)
..++..|+|||.+. +..++.++||||||+++|||++|..||.... .............. ...
T Consensus 153 ~~~~~~y~~pe~~~--~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------------~~~~~~~~~~~~~~---~~~- 214 (260)
T cd05611 153 FVGTPDYLAPETIL--GVGDDKMSDWWSLGCVIFEFLFGYPPFHAET------------PDAVFDNILSRRIN---WPE- 214 (260)
T ss_pred CCCCcCccChhhhc--CCCCcchhhhHHHHHHHHHHHHCCCCCCCCC------------HHHHHHHHHhcccC---CCC-
Confidence 55778899999764 4458899999999999999999999996432 11222222111100 000
Q ss_pred hccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 600 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
.........+.+++.+||+.+|++||++.++.+.|.
T Consensus 215 ----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 215 ----EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred ----cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 000112346788888999999999998877766544
No 322
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2.9e-33 Score=291.93 Aligned_cols=250 Identities=27% Similarity=0.410 Sum_probs=193.2
Q ss_pred cCHHHHHHHHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCe
Q 005880 355 FELEDLLRASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREE 430 (672)
Q Consensus 355 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 430 (672)
.+.+++ +...+.||+|+||.||+|+.. +|+.||+|.+..... .....+.+|++++++++|||++++++++.+...
T Consensus 17 ~~~~~~-~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 95 (313)
T cd06633 17 DDPEEI-FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHT 95 (313)
T ss_pred CCHHHH-hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCE
Confidence 344444 233467999999999999954 689999999864322 233568889999999999999999999999999
Q ss_pred EEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 431 KLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 431 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
.++||||+. |++.+++.... .++++.++..++.|++.||+||| +.+++||||+|+||+++.++.+||+|||
T Consensus 96 ~~lv~e~~~-~~l~~~l~~~~----~~l~~~~~~~~~~qi~~al~~LH----~~gi~H~dl~p~nili~~~~~~kL~dfg 166 (313)
T cd06633 96 AWLVMEYCL-GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLH----SHNMIHRDIKAGNILLTEPGQVKLADFG 166 (313)
T ss_pred EEEEEecCC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCChhhEEECCCCCEEEeecC
Confidence 999999995 57877776433 35899999999999999999999 7899999999999999999999999999
Q ss_pred CCccCCCC-CCCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 511 LSIFAPPS-TVPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 511 ~a~~~~~~-~~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
++...... ...++..|+|||++.. ....++.++|||||||++|||++|+.||.... ..........
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~------------~~~~~~~~~~ 234 (313)
T cd06633 167 SASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------------AMSALYHIAQ 234 (313)
T ss_pred CCcccCCCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------------hHHHHHHHHh
Confidence 98654332 4556788999997642 23567889999999999999999999986432 1111222111
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.... ... . ......+.+++.+||+.+|.+||++.+++.
T Consensus 235 ~~~~------~~~-~---~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 235 NDSP------TLQ-S---NEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred cCCC------CCC-c---cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1110 000 0 112235778888999999999999999984
No 323
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.9e-34 Score=295.39 Aligned_cols=246 Identities=23% Similarity=0.350 Sum_probs=187.7
Q ss_pred HHhcccCcCCeEEEEEEEEcC-CcEEEEEEcccCCc-chHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEEEEeecC
Q 005880 363 ASAEMLGKGGFGTAYKAVLDD-GSVVAVKRLKDASI-GGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.+.||+|+||.||+|...+ ++.||||+++.... ....++.+|++++.+.. ||||+++++++.+....++||||++
T Consensus 18 ~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 97 (296)
T cd06618 18 ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS 97 (296)
T ss_pred eeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC
Confidence 456889999999999999764 89999999975432 23456677887776664 9999999999999999999999985
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS-LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
+++.+++.... .++++..+..++.|+++||+||| + .+|+||||+|+||++++++.+||+|||++......
T Consensus 98 -~~l~~l~~~~~----~~l~~~~~~~i~~~i~~~l~~lH----~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 98 -TCLDKLLKRIQ----GPIPEDILGKMTVAIVKALHYLK----EKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred -cCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----hhCCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 57777765432 36899999999999999999999 4 58999999999999999999999999998765432
Q ss_pred ----CCCCCCcccCCCccccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 519 ----TVPRSNGYRAPELSSSDG--RKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~--~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
...++..|+|||.+.... ..++.++||||||+++|||++|+.||..... ..+..........
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----------~~~~~~~~~~~~~- 236 (296)
T cd06618 169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT-----------EFEVLTKILQEEP- 236 (296)
T ss_pred CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh-----------HHHHHHHHhcCCC-
Confidence 233567899999765332 3478899999999999999999999853210 0111111111110
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
.. .........++.+++.+||+.||++||++.++++.
T Consensus 237 ~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 237 PS--------LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CC--------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 00001123457888899999999999999999754
No 324
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=9.4e-34 Score=291.54 Aligned_cols=250 Identities=23% Similarity=0.305 Sum_probs=190.7
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|+.. +|+.+|+|++.... ......+.+|++++++++|+|++++++++.+. +..++|+||++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 83 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD 83 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc
Confidence 467999999999999965 58999999998653 23456788999999999999999999999988 78999999997
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+ +|.+++.... ..+++..++.++.|+++||+||| +.+++|+||||+||++++++.+||+|||++......
T Consensus 84 ~-~l~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH----~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 84 H-DLTGLLDSPE----VKFTESQIKCYMKQLLEGLQYLH----SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred c-cHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 4 8988886542 35899999999999999999999 789999999999999999999999999999766543
Q ss_pred -----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh---
Q 005880 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE--- 590 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 590 (672)
...++..|+|||.+.. ...++.++||||||+++|||+||+.||...... ..+....+..
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~-~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~------------~~~~~~~~~~~~~ 221 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLG-ATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL------------EQLEKIFELCGSP 221 (287)
T ss_pred cccccccccccccCCceeeEc-cccCChHHHHHHHHHHHHHHHhCCCCCCCCChH------------HHHHHHHHHhCCC
Confidence 2334677999996542 345789999999999999999999999654311 1111111100
Q ss_pred ---ccccc--------cchhhcccc----ChHH-HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 591 ---WTAEV--------FDLELMRYK----DIEE-EMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 591 ---~~~~~--------~d~~~~~~~----~~~~-~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... ......... .... +...+.+++.+||..+|.+||++.++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 222 TDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred chhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000 000000000 0001 1456889999999999999999999975
No 325
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-35 Score=307.54 Aligned_cols=266 Identities=24% Similarity=0.332 Sum_probs=199.6
Q ss_pred hcccCcCCeEEEEEEE-EcCCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC------eEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE------EKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~e 436 (672)
.+.||+|+||.||+|+ ..+|+.||||.++... ....+...+|+++|++++|+|||+++++-.+.. ...+|||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 3679999999999999 5679999999998643 345677889999999999999999998865443 5689999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC--CCCc--EEEeccCCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD--KTGN--ARVSDFGLS 512 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~--~~~~--~kl~DfG~a 512 (672)
||.+|+|+..|.... +..-+++.+.+.+..+++.||.||| +++|+||||||.||++- ++|+ .||+|||.|
T Consensus 98 yC~gGsL~~~L~~PE--N~~GLpE~e~l~lL~d~~~al~~Lr----En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 98 YCSGGSLRKVLNSPE--NAYGLPESEFLDLLSDLVSALRHLR----ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ecCCCcHHHHhcCcc--cccCCCHHHHHHHHHHHHHHHHHHH----HcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 999999999997654 3456999999999999999999999 88999999999999984 4454 799999999
Q ss_pred ccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 513 IFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 513 ~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
+..+.+ ..+||..|.+||++.. ...|+..+|.|||||++||.+||..||....... ...-..|.....+
T Consensus 172 rel~d~s~~~S~vGT~~YLhPel~E~-q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk------~~~~~~~~~~tkk 244 (732)
T KOG4250|consen 172 RELDDNSLFTSLVGTEEYLHPELYER-QKKYTATVDLWSFGVTLYECATGELPFIPFGGPK------NNKEIMWHIITKK 244 (732)
T ss_pred ccCCCCCeeeeecCchhhcChHHHhh-ccCcCceeehhhhhhHHHHHhccCCCCCcCCCcc------ccchhhhhhhccC
Confidence 998876 5678999999997643 4688999999999999999999999997654321 0001112211111
Q ss_pred hhccccccchhhcc---------cc--ChHHHHHHHHHHHHhccCCCCCCCC--CHHHHHHHHHHHhc
Q 005880 589 EEWTAEVFDLELMR---------YK--DIEEEMVGLLQVAMACTSASPDQRP--NMSHVVKLIEELRG 643 (672)
Q Consensus 589 ~~~~~~~~d~~~~~---------~~--~~~~~~~~l~~li~~Cl~~dP~~RP--t~~evl~~L~~i~~ 643 (672)
........+++..+ .+ -.......+..+...+|..+|++|. ...+....+..|.+
T Consensus 245 p~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 245 PSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred CCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 11111111111110 00 0122334455666688889999999 77777777777654
No 326
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=5.5e-34 Score=289.44 Aligned_cols=239 Identities=24% Similarity=0.388 Sum_probs=191.0
Q ss_pred cCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 368 LGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 368 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
||+|+||.||+++.. +|+.+|+|.+..... ...+.+.+|++++++++||||+++++.+......++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 489999999875433 3456788999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++.... .+++..+..++.|+++||+||| +.+++||||+|+||++++++.++|+|||++......
T Consensus 81 ~~~l~~~~-----~~~~~~~~~i~~qi~~~L~~lH----~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 151 (265)
T cd05579 81 ASLLENVG-----SLDEDVARIYIAEIVLALEYLH----SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL 151 (265)
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH----HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc
Confidence 99997542 5899999999999999999999 789999999999999999999999999998654322
Q ss_pred --------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 519 --------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 519 --------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
...++..|+|||... ....+.++||||||+++|||++|+.||.... ..+.........
T Consensus 152 ~~~~~~~~~~~~~~~~~~Pe~~~--~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------------~~~~~~~~~~~~ 217 (265)
T cd05579 152 NDDEKEDKRIVGTPDYIAPEVIL--GQGHSKTVDWWSLGCILYEFLVGIPPFHGET------------PEEIFQNILNGK 217 (265)
T ss_pred ccccccccCcccCccccCHHHhc--CCCCCcchhhHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHhcCC
Confidence 234567899999654 4457889999999999999999999996432 122222221111
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
. . .+........+.+++.+||+.+|.+|||+.++.+.|+
T Consensus 218 ~-----~-----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 218 I-----E-----WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred c-----C-----CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0 0 0000001346788888999999999999977766655
No 327
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.3e-34 Score=320.44 Aligned_cols=241 Identities=26% Similarity=0.358 Sum_probs=179.2
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccC-CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC--------------
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE-------------- 429 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------------- 429 (672)
+.||+||||.||+++.+ ||+.||||++.-. +........+|++.+++|+|||||+++..+.+..
T Consensus 485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~ 564 (1351)
T KOG1035|consen 485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSE 564 (1351)
T ss_pred HHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchh
Confidence 68999999999999965 8999999999744 3334567889999999999999999976553100
Q ss_pred --------------------------------------------------------------------------------
Q 005880 430 -------------------------------------------------------------------------------- 429 (672)
Q Consensus 430 -------------------------------------------------------------------------------- 429 (672)
T Consensus 565 ~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~ 644 (1351)
T KOG1035|consen 565 SRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDD 644 (1351)
T ss_pred hhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCc
Confidence
Q ss_pred -------------------------eEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCC
Q 005880 430 -------------------------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484 (672)
Q Consensus 430 -------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ 484 (672)
..||=||||+..+|+++++.+... -.-...++++.+|++||+|+| +.
T Consensus 645 ~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~----~~~d~~wrLFreIlEGLaYIH----~~ 716 (1351)
T KOG1035|consen 645 TSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN----SQRDEAWRLFREILEGLAYIH----DQ 716 (1351)
T ss_pred chhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc----hhhHHHHHHHHHHHHHHHHHH----hC
Confidence 025778899888888888765421 135678999999999999999 88
Q ss_pred CcEecCCCCCCEEeCCCCcEEEeccCCCccCC-----------------------CCCCCCCCcccCCCccccCC-CCCC
Q 005880 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP-----------------------PSTVPRSNGYRAPELSSSDG-RKQS 540 (672)
Q Consensus 485 ~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~-----------------------~~~~~~t~~y~aPE~l~~~~-~~~~ 540 (672)
+||||||||.||++|++..+||+|||+|.... .....||.-|+|||++.... ..|+
T Consensus 717 giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn 796 (1351)
T KOG1035|consen 717 GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYN 796 (1351)
T ss_pred ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccccc
Confidence 99999999999999999999999999997621 01345678899999876443 2799
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhc
Q 005880 541 QKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMAC 620 (672)
Q Consensus 541 ~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~C 620 (672)
.|+|+||+|||++||+. ||....+ -...+. .++......- + ....+.+..=.++|.++
T Consensus 797 ~KiDmYSLGIVlFEM~y---PF~TsME-----------Ra~iL~-~LR~g~iP~~--~-----~f~~~~~~~e~slI~~L 854 (1351)
T KOG1035|consen 797 SKIDMYSLGIVLFEMLY---PFGTSME-----------RASILT-NLRKGSIPEP--A-----DFFDPEHPEEASLIRWL 854 (1351)
T ss_pred chhhhHHHHHHHHHHhc---cCCchHH-----------HHHHHH-hcccCCCCCC--c-----ccccccchHHHHHHHHH
Confidence 99999999999999987 5643211 111111 1111111111 0 01122333445788899
Q ss_pred cCCCCCCCCCHHHHHH
Q 005880 621 TSASPDQRPNMSHVVK 636 (672)
Q Consensus 621 l~~dP~~RPt~~evl~ 636 (672)
++.||.+||||.|+++
T Consensus 855 l~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 855 LSHDPSKRPTATELLN 870 (1351)
T ss_pred hcCCCccCCCHHHHhh
Confidence 9999999999999975
No 328
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.4e-33 Score=289.00 Aligned_cols=237 Identities=22% Similarity=0.343 Sum_probs=184.4
Q ss_pred cCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 368 LGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 368 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
||+|+||+||+|... +|+.||+|.+..... .....+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999854 689999999864322 2345677899999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----C
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----T 519 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----~ 519 (672)
.+++..... ..+++..+..++.|+++||.||| +.+++||||+|+||++++++.+||+|||.+...... .
T Consensus 81 ~~~l~~~~~---~~~~~~~~~~~~~ql~~~l~~lH----~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 153 (277)
T cd05577 81 KYHIYNVGE---PGFPEARAIFYAAQIICGLEHLH----QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKG 153 (277)
T ss_pred HHHHHHcCc---CCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccc
Confidence 999975432 45899999999999999999999 789999999999999999999999999998765432 3
Q ss_pred CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchh
Q 005880 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLE 599 (672)
Q Consensus 520 ~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (672)
..++..|+|||++. +..++.++|||||||++|+|++|+.||....... ..... ..... ...
T Consensus 154 ~~~~~~y~~PE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~-----~~~~~----~~~ 214 (277)
T cd05577 154 RAGTPGYMAPEVLQ--GEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV--------EKEEL-----KRRTL----EMA 214 (277)
T ss_pred ccCCCCcCCHHHhc--CCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc--------cHHHH-----Hhccc----ccc
Confidence 34567899999764 4558899999999999999999999996432110 00111 00000 000
Q ss_pred hccccChHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 005880 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSH 633 (672)
Q Consensus 600 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e 633 (672)
.... ......+.+++.+||+.||++||+..|
T Consensus 215 ~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 215 VEYP---DKFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred ccCC---ccCCHHHHHHHHHHccCChhHccCCCc
Confidence 0000 112335778888999999999994444
No 329
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.6e-33 Score=289.59 Aligned_cols=252 Identities=23% Similarity=0.316 Sum_probs=191.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|++|.||+|+.. +|..||||.++..... ....+.+|++++++++|+||+++++++.+.+..++||||+++ +
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~ 83 (284)
T cd07836 5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-D 83 (284)
T ss_pred eeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-c
Confidence 478999999999999965 6899999998754332 346678899999999999999999999999999999999975 8
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++..... ...+++..+..++.|+++||+||| +.+++||||||+||++++++.++|+|||++......
T Consensus 84 l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (284)
T cd07836 84 LKKYMDTHGV--RGALDPNTVKSFTYQLLKGIAFCH----ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTF 157 (284)
T ss_pred HHHHHHhcCC--CCCcCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccc
Confidence 8888865431 245899999999999999999999 789999999999999999999999999998754332
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh-------
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE------- 590 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 590 (672)
...++..|+|||++.. ...++.++|||||||++|||++|+.||......+ ......+..
T Consensus 158 ~~~~~~~~y~~PE~~~~-~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~ 224 (284)
T cd07836 158 SNEVVTLWYRAPDVLLG-SRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED------------QLLKIFRIMGTPTEST 224 (284)
T ss_pred ccccccccccChHHhcC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH------------HHHHHHHHhCCCChhh
Confidence 3345778999997643 3457889999999999999999999997542211 111111000
Q ss_pred ----ccccccchhhccc------cChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 591 ----WTAEVFDLELMRY------KDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 591 ----~~~~~~d~~~~~~------~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
............. .........+.+++.+|++.||.+||++.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 225 WPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred HHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000000000000 000112345778999999999999999999974
No 330
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.1e-33 Score=294.65 Aligned_cols=250 Identities=24% Similarity=0.315 Sum_probs=186.7
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc--hHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG--GKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|... +|+.||+|.++..... ....+.+|++++++++|+||+++++++.+. +..++||||++
T Consensus 12 ~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 91 (309)
T cd07845 12 LNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE 91 (309)
T ss_pred eeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC
Confidence 467999999999999964 6899999998643221 234567899999999999999999998765 46799999996
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
++|.+++.... ..+++.++..++.|+++||+||| +.+++||||||+||++++++.+||+|||++......
T Consensus 92 -~~l~~~l~~~~----~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 92 -QDLASLLDNMP----TPFSESQVKCLMLQLLRGLQYLH----ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred -CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 58988887543 45899999999999999999999 789999999999999999999999999999765432
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh----
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE---- 590 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 590 (672)
....+..|+|||++.. ...++.++||||+||++|||++|+.||..... .+.+.......
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~~DvwslG~il~el~~g~~~f~~~~~------------~~~~~~~~~~~~~~~ 229 (309)
T cd07845 163 KPMTPKVVTLWYRAPELLLG-CTTYTTAIDMWAVGCILAELLAHKPLLPGKSE------------IEQLDLIIQLLGTPN 229 (309)
T ss_pred CCCCcccccccccChhhhcC-CCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH------------HHHHHHHHHhcCCCC
Confidence 1223567999997642 34578999999999999999999999964321 11111111100
Q ss_pred --c--------cccccchhhccccChH----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 591 --W--------TAEVFDLELMRYKDIE----EEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 591 --~--------~~~~~d~~~~~~~~~~----~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
. ....+........... .....+.+++.+|++.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 230 ESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 0000000000000000 12345678899999999999999999984
No 331
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.2e-33 Score=297.98 Aligned_cols=252 Identities=21% Similarity=0.308 Sum_probs=186.1
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC-----eEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE-----EKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~ 437 (672)
.+.||+|+||.||+|+. .+|+.||+|.+.... ......+.+|+.++++++||||+++++++.... ..++|+||
T Consensus 10 ~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 89 (336)
T cd07849 10 LSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQEL 89 (336)
T ss_pred EEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehh
Confidence 47899999999999985 468999999986432 224566888999999999999999999876543 57899999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
++ ++|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~~-~~l~~~~~~~------~l~~~~~~~i~~ql~~aL~~LH----~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 158 (336)
T cd07849 90 ME-TDLYKLIKTQ------HLSNDHIQYFLYQILRGLKYIH----SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADP 158 (336)
T ss_pred cc-cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEECCCCCEEECcccceeeccc
Confidence 96 5888887543 4899999999999999999999 88999999999999999999999999999876533
Q ss_pred C--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 518 S--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 518 ~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
. ...++..|+|||.+.. ...++.++|||||||++|||++|+.||...... .....+......
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~---------~~~~~~~~~~~~ 228 (336)
T cd07849 159 EHDHTGFLTEYVATRWYRAPEIMLN-SKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL---------HQLNLILGVLGT 228 (336)
T ss_pred cccccCCcCCcCcCCCccChHHhhC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHHHcCC
Confidence 2 2356778999997532 356789999999999999999999999643210 000000000000
Q ss_pred h---ccccccchh-------h--ccccC----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 590 E---WTAEVFDLE-------L--MRYKD----IEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 590 ~---~~~~~~d~~-------~--~~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
. ....+.+.. . ..... ......++.+++.+||+.||++|||+.|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 229 PSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 000000000 0 00000 01123457889999999999999999999865
No 332
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.3e-34 Score=314.86 Aligned_cols=193 Identities=21% Similarity=0.330 Sum_probs=152.6
Q ss_pred HHhcccCcCCeEEEEEEEEcC--CcEEEEE------------------EcccCCcchHHHHHHHHHHHcCCCCCceeeeE
Q 005880 363 ASAEMLGKGGFGTAYKAVLDD--GSVVAVK------------------RLKDASIGGKREFEQHMEVLGRLRHPNLVGLK 422 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~--g~~vavK------------------~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 422 (672)
.+.+.||+|+||.||++..+. +..+++| .+. ........+.+|++++++++||||++++
T Consensus 151 ~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~l~ 229 (501)
T PHA03210 151 RVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHENILKIE 229 (501)
T ss_pred EEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCCcCcEe
Confidence 345789999999999987542 2222222 111 1112345688999999999999999999
Q ss_pred EEEEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC
Q 005880 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG 502 (672)
Q Consensus 423 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~ 502 (672)
+++...+..++|+|++ .++|.+++..................|+.|++.||+||| +.+|+||||||+|||++.++
T Consensus 230 ~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH----~~gIiHrDLKP~NILl~~~~ 304 (501)
T PHA03210 230 EILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH----DKKLIHRDIKLENIFLNCDG 304 (501)
T ss_pred EEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCC
Confidence 9999999999999999 457877776443221223446677889999999999999 78999999999999999999
Q ss_pred cEEEeccCCCccCCCC------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 005880 503 NARVSDFGLSIFAPPS------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSV 563 (672)
Q Consensus 503 ~~kl~DfG~a~~~~~~------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~ 563 (672)
.+||+|||+++..... ...||..|+|||++. +..++.++|||||||++|||++|+.++.
T Consensus 305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlGvil~ell~~~~~p~ 369 (501)
T PHA03210 305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILA--GDGYCEITDIWSCGLILLDMLSHDFCPI 369 (501)
T ss_pred CEEEEeCCCceecCcccccccccccCCcCCCCchhhc--CCCCCcHHHHHHHHHHHHHHHHCCCCCc
Confidence 9999999999766432 345789999999765 4578999999999999999999986543
No 333
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.6e-33 Score=286.09 Aligned_cols=239 Identities=23% Similarity=0.331 Sum_probs=182.8
Q ss_pred ccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcc---hHHHHHHHH---HHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 367 MLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIG---GKREFEQHM---EVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~~e~---~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.||+|+||.||+|.. .+|+.||+|.+...... ....+..|. +.++...||||+++++++..++..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999995 46899999998654321 122233343 34555689999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 81 g~~L~~~l~~~-----~~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~ 151 (278)
T cd05606 81 GGDLHYHLSQH-----GVFSEAEMRFYAAEIILGLEHMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 151 (278)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC
Confidence 99999988643 35899999999999999999999 789999999999999999999999999998755432
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++.. +..++.++||||+||++|||++|+.||....... .... ...... .
T Consensus 152 ~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~---------~~~~-~~~~~~------~ 214 (278)
T cd05606 152 PHASVGTHGYMAPEVLQK-GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---------KHEI-DRMTLT------M 214 (278)
T ss_pred CcCcCCCcCCcCcHHhcC-CCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc---------hHHH-HHHhhc------c
Confidence 3457889999997642 3457899999999999999999999997542111 1111 000000 0
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 636 (672)
..... . .....+.+++.+|+..+|.+|| ++.|+++
T Consensus 215 ~~~~~--~---~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 215 AVELP--D---SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCCCC--C---cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 00110 1 1134577888899999999999 8888874
No 334
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.1e-33 Score=289.82 Aligned_cols=243 Identities=24% Similarity=0.353 Sum_probs=188.9
Q ss_pred HhcccCcCCeEEEEEEEE----cCCcEEEEEEcccCCc----chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASI----GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLV 434 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 434 (672)
..+.||+|+||.||++.. .+|..||+|+++.... ...+.+.+|++++.++ +|+||+++++++..+...++|
T Consensus 4 ~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (290)
T cd05613 4 LLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLI 83 (290)
T ss_pred eeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEE
Confidence 346899999999999985 3689999999875322 2346788899999999 599999999999988899999
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
|||+++++|.+++... .++++..+..++.|+++||+||| +.+++||||||+||++++++.+||+|||++..
T Consensus 84 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 84 LDYINGGELFTHLSQR-----ERFKEQEVQIYSGEIVLALEHLH----KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 9999999999999754 34889999999999999999999 78999999999999999999999999999876
Q ss_pred CCCC------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 515 APPS------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 515 ~~~~------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
.... ...++..|+|||.+......++.++||||||+++|+|++|+.||...... .....+......
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--------~~~~~~~~~~~~ 226 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK--------NSQAEISRRILK 226 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc--------ccHHHHHHHhhc
Confidence 5432 23467889999976543345678999999999999999999998643211 112222222111
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVV 635 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl 635 (672)
... .. . ......+.+++.+||+.||++|| ++.+++
T Consensus 227 ~~~-------~~--~---~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~ 266 (290)
T cd05613 227 SEP-------PY--P---QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIK 266 (290)
T ss_pred cCC-------CC--C---ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHH
Confidence 110 00 0 11223567888899999999997 555554
No 335
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-34 Score=317.46 Aligned_cols=259 Identities=28% Similarity=0.396 Sum_probs=204.0
Q ss_pred cCHHHHHHHHhcccCcCCeEEEEEEEEcC--------CcEEEEEEcccCCc-chHHHHHHHHHHHcCC-CCCceeeeEEE
Q 005880 355 FELEDLLRASAEMLGKGGFGTAYKAVLDD--------GSVVAVKRLKDASI-GGKREFEQHMEVLGRL-RHPNLVGLKAY 424 (672)
Q Consensus 355 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~ 424 (672)
+++.+-...+.+.||+|.||.|++|.... ...||||.+++... .+.+.+..|+++|..+ +|+||+.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 44433333556799999999999998431 35799999986443 4678899999999998 69999999999
Q ss_pred EEcCCeEEEEEeecCCCChhHHhhcCC---------CCCC--CCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCC
Q 005880 425 YFAREEKLLVSEYMPNGSLFWLLHGNR---------GPGR--TPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKS 493 (672)
Q Consensus 425 ~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp 493 (672)
|..++..++|+||++.|+|.++|+..+ .... ..++....+.++.|||.|++||+ +.++|||||.+
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~----~~~~vHRDLAa 446 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA----SVPCVHRDLAA 446 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh----hCCccchhhhh
Confidence 999999999999999999999998776 1111 23889999999999999999999 88999999999
Q ss_pred CCEEeCCCCcEEEeccCCCccCCCCCCC---C-----CCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 005880 494 TNVLLDKTGNARVSDFGLSIFAPPSTVP---R-----SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVI 564 (672)
Q Consensus 494 ~NIll~~~~~~kl~DfG~a~~~~~~~~~---~-----t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~ 564 (672)
+|||+.++..+||+|||+|+........ + ...|||||.+. ...|+.|+|||||||+|||++| |..||.+
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~--~~~ft~kSDVWSfGI~L~EifsLG~~PYp~ 524 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLF--DRVFTSKSDVWSFGILLWEIFTLGGTPYPG 524 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhc--cCcccccchhhHHHHHHHHHhhCCCCCCCC
Confidence 9999999999999999999976554221 1 23499999664 5799999999999999999999 7788743
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 565 DGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
-. ...+.+. .++++. +......+..++.++++.||+.+|++||++.|+.+.++..
T Consensus 525 ~~-----------~~~~l~~-~l~~G~----------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 525 IP-----------PTEELLE-FLKEGN----------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred CC-----------cHHHHHH-HHhcCC----------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 10 0112222 223221 1111233455788999999999999999999999999985
No 336
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.3e-33 Score=281.95 Aligned_cols=239 Identities=27% Similarity=0.433 Sum_probs=193.4
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
..+.||+|++|.||+++.. +++.||+|.+..... .....+.+|++++++++|+|++++++++.+.+..++||||+++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (254)
T cd06627 4 LGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAEN 83 (254)
T ss_pred eeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCC
Confidence 3578999999999999855 678999999986554 3557899999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCC-
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST- 519 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~- 519 (672)
++|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||.+.......
T Consensus 84 ~~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 84 GSLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLH----EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CcHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 9999998754 35899999999999999999999 8899999999999999999999999999997665432
Q ss_pred ----CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 520 ----VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 520 ----~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
..++..|+|||... +..++.++||||+|+++|+|++|+.||.... ..... ....... ..
T Consensus 155 ~~~~~~~~~~y~~pe~~~--~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~-----------~~~~~-~~~~~~~-~~-- 217 (254)
T cd06627 155 DDASVVGTPYWMAPEVIE--MSGASTASDIWSLGCTVIELLTGNPPYYDLN-----------PMAAL-FRIVQDD-HP-- 217 (254)
T ss_pred cccccccchhhcCHhhhc--CCCCCcchhHHHHHHHHHHHHhCCCCCCCcc-----------HHHHH-HHHhccC-CC--
Confidence 35677899999654 3457899999999999999999999986321 11111 1111110 00
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. . ......+.+++.+||..+|++|||+.|++.
T Consensus 218 ---~~--~---~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 218 ---PL--P---EGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ---CC--C---CCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 00 0 112345778888999999999999999974
No 337
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=5.1e-34 Score=289.00 Aligned_cols=240 Identities=22% Similarity=0.303 Sum_probs=192.4
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
..+.||+|+||.||+|... ++..||+|.+..... ...+.+.+|++++++++||||+++++++.+.+..++|+||++
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 83 (258)
T cd05578 4 LLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLL 83 (258)
T ss_pred EEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCC
Confidence 3578999999999999965 689999999875332 345788999999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+++|.+++... .++++..+..++.|+++||.||| +.+++|+||+|+||++++++.++|+|||.+......
T Consensus 84 ~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh----~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 84 GGDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLH----SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999754 35889999999999999999999 789999999999999999999999999998765543
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++||||||+++|+|++|+.||...... ...++....... ..
T Consensus 155 ~~~~~~~~~~y~~PE~~~--~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----------~~~~~~~~~~~~--~~- 219 (258)
T cd05578 155 LTTSTSGTPGYMAPEVLC--RQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT----------IRDQIRAKQETA--DV- 219 (258)
T ss_pred cccccCCChhhcCHHHHc--ccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc----------HHHHHHHHhccc--cc-
Confidence 345677899999764 445889999999999999999999999754211 122222111110 00
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH--HHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM--SHVV 635 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~--~evl 635 (672)
.........+.+++.+||+.||.+||++ +|++
T Consensus 220 --------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 220 --------LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred --------cCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0011123567788889999999999999 5543
No 338
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=4.2e-33 Score=293.92 Aligned_cols=262 Identities=24% Similarity=0.304 Sum_probs=188.3
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccC--CcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcC--CeEEEEEe
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA--SIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAR--EEKLLVSE 436 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~~lv~e 436 (672)
...+.||+|+||.||+|... +|+.||||++... .......+.+|+.+++++ +||||+++++++... ...++|||
T Consensus 10 ~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e 89 (337)
T cd07852 10 EILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFE 89 (337)
T ss_pred HHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEec
Confidence 44578999999999999965 6889999988542 222445677899999999 999999999998654 36799999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|++ ++|..++... .++|..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||++....
T Consensus 90 ~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH----~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 90 YME-TDLHAVIRAN------ILEDVHKRYIMYQLLKALKYIH----SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred ccc-cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 996 5999888643 4789999999999999999999 7899999999999999999999999999987553
Q ss_pred CC----------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCChhHHH
Q 005880 517 PS----------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG---CGGAVDLPRWV 583 (672)
Q Consensus 517 ~~----------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~~ 583 (672)
.. ...++..|+|||++.. ...++.++||||||+++|||+||+.||......+... ...+....+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLG-STRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred cccccccCcchhcccccccccCceeeec-cccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 32 2346778999997643 3467889999999999999999999996432110000 00000000000
Q ss_pred HHHHhhhccccccc----hhhccc-cChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 584 QSVVREEWTAEVFD----LELMRY-KDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 584 ~~~~~~~~~~~~~d----~~~~~~-~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
... .......+++ ...... ........++.+++.+||+.||++|||+.++++.
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 238 ESI-KSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHH-HhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000 0000000110 000000 0001123567889999999999999999999974
No 339
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.7e-33 Score=282.85 Aligned_cols=232 Identities=23% Similarity=0.287 Sum_probs=179.6
Q ss_pred cCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCCCChhH
Q 005880 368 LGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFW 445 (672)
Q Consensus 368 lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 445 (672)
||+|+||.||+++. .++..+|+|.+........ |+.....+ +||||+++++++..++..++||||+++|+|.+
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~ 98 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFD 98 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHH
Confidence 69999999999995 4688999999865432111 22222212 69999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC-cEEEeccCCCccCCCC-CCCCC
Q 005880 446 LLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG-NARVSDFGLSIFAPPS-TVPRS 523 (672)
Q Consensus 446 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~-~~kl~DfG~a~~~~~~-~~~~t 523 (672)
++.... .+++.++..++.|+++||.||| +.+++||||||+||+++.++ .++|+|||+++..... ...++
T Consensus 99 ~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 169 (267)
T PHA03390 99 LLKKEG-----KLSEAEVKKIIRQLVEALNDLH----KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGT 169 (267)
T ss_pred HHHhcC-----CCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCC
Confidence 997542 5899999999999999999999 78999999999999999988 9999999998766543 45678
Q ss_pred CcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccc
Q 005880 524 NGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRY 603 (672)
Q Consensus 524 ~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (672)
..|+|||++. +..++.++||||||+++|||++|+.||...... ..+...+.... .. ..
T Consensus 170 ~~y~aPE~~~--~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~-~~---------~~--- 227 (267)
T PHA03390 170 LDYFSPEKIK--GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-------ELDLESLLKRQ-QK---------KL--- 227 (267)
T ss_pred CcccChhhhc--CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-------hhhHHHHHHhh-cc---------cC---
Confidence 8999999764 456789999999999999999999999743221 11222222211 00 00
Q ss_pred cChHHHHHHHHHHHHhccCCCCCCCCC-HHHHH
Q 005880 604 KDIEEEMVGLLQVAMACTSASPDQRPN-MSHVV 635 (672)
Q Consensus 604 ~~~~~~~~~l~~li~~Cl~~dP~~RPt-~~evl 635 (672)
.........+.+++.+||+.+|.+||+ ++|++
T Consensus 228 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 228 PFIKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred CcccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 001123345778888999999999996 58886
No 340
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.8e-33 Score=295.01 Aligned_cols=252 Identities=22% Similarity=0.302 Sum_probs=187.5
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcch--------------HHHHHHHHHHHcCCCCCceeeeEEEEEcCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGG--------------KREFEQHMEVLGRLRHPNLVGLKAYYFARE 429 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 429 (672)
.+.||+|+||.||+|... +++.||||.++...... ...+.+|+++++.++|+||+++++++..++
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 467999999999999954 68999999986433211 125778999999999999999999999999
Q ss_pred eEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEecc
Q 005880 430 EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDF 509 (672)
Q Consensus 430 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 509 (672)
..++||||++ |+|.+++... ..+++.....++.|+++||+||| +.+|+||||+|+||+++.++.+||+||
T Consensus 94 ~~~lv~e~~~-~~l~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH----~~~i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 94 FINLVMDIMA-SDLKKVVDRK-----IRLTESQVKCILLQILNGLNVLH----KWYFMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred cEEEEEeccc-cCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeecccccHHHeEECCCCCEEECCc
Confidence 9999999996 6999998643 34899999999999999999999 789999999999999999999999999
Q ss_pred CCCccCCCC-------------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 005880 510 GLSIFAPPS-------------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAG 570 (672)
Q Consensus 510 G~a~~~~~~-------------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~ 570 (672)
|+++..... ...++..|+|||.+.. ...++.++|||||||++|||++|+.||......+
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~- 241 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG-AEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID- 241 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhccc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 998765410 1234667999997643 3457899999999999999999999997543211
Q ss_pred CCCCCCCChhHHHHHHHhhh----ccccc----cchhhc-cccC----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 571 MGCGGAVDLPRWVQSVVREE----WTAEV----FDLELM-RYKD----IEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~----~~~~~----~d~~~~-~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....+....... +.... ..+... .... .......+.+++.+||+.+|++||++.|++.
T Consensus 242 --------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 242 --------QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred --------HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 111111100000 00000 000000 0000 0112345778999999999999999999984
No 341
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=4.3e-33 Score=295.69 Aligned_cols=187 Identities=23% Similarity=0.360 Sum_probs=158.9
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccC--CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcC------CeEEEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA--SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR------EEKLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ 435 (672)
.+.||+|+||.||+|+.. +|+.||+|++... ......++.+|++++++++||||+++++++... ...++||
T Consensus 21 ~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 100 (353)
T cd07850 21 LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVM 100 (353)
T ss_pred EEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEE
Confidence 467999999999999954 7899999998643 223445778899999999999999999988643 3468999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+. ++|.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~-~~l~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH----~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 168 (353)
T cd07850 101 ELMD-ANLCQVIQM-------DLDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 168 (353)
T ss_pred eccC-CCHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence 9995 588888752 2788999999999999999999 789999999999999999999999999999866
Q ss_pred CCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 516 PPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 516 ~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
... ...++..|+|||.+. +..++.++|||||||++|+|++|+.||...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 169 GTSFMMTPYVVTRYYRAPEVIL--GMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred CCCCCCCCCcccccccCHHHHh--CCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 543 234677899999764 567899999999999999999999999643
No 342
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.4e-33 Score=293.71 Aligned_cols=191 Identities=26% Similarity=0.339 Sum_probs=158.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCC--------eEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFARE--------EKLL 433 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--------~~~l 433 (672)
.+.||+|+||.||+|... +++.||||.+..... .....+.+|++++++++||||+++++++...+ ..++
T Consensus 17 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 96 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYL 96 (310)
T ss_pred EEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEE
Confidence 468999999999999965 689999998864322 22345678999999999999999999987654 3489
Q ss_pred EEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 434 VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
||||+. ++|.+++.... ..+++.+++.++.|+++||+||| +.+++||||||+||+++.++.+||+|||++.
T Consensus 97 v~e~~~-~~l~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 97 VFEFCE-HDLAGLLSNKN----VKFTLSEIKKVMKMLLNGLYYIH----RNKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred EEcCCC-cCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 999996 58888876432 35899999999999999999999 7899999999999999999999999999987
Q ss_pred cCCCC---------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 514 FAPPS---------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 514 ~~~~~---------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
..... ...++..|+|||.+.. ...++.++||||||+++|||++|+.||...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~~l~el~t~~~~~~~~ 227 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLG-ERDYGPPIDMWGAGCIMAEMWTRSPIMQGN 227 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcC-CcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 55332 2234667999997642 345688999999999999999999998643
No 343
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.4e-33 Score=291.07 Aligned_cols=254 Identities=23% Similarity=0.303 Sum_probs=187.1
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC----------e
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE----------E 430 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----------~ 430 (672)
+.+.||+|+||.||+|... +|+.||+|+++... ......+.+|++++++++||||+++++++.+.. .
T Consensus 11 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 90 (302)
T cd07864 11 IIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGA 90 (302)
T ss_pred eeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCc
Confidence 4578999999999999965 58999999987432 223456788999999999999999999987654 7
Q ss_pred EEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 431 KLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 431 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
.++|+||+++ ++...+.... ..+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||
T Consensus 91 ~~lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH----~~~i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 91 FYLVFEYMDH-DLMGLLESGL----VHFSEDHIKSFMKQLLEGLNYCH----KKNFLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred EEEEEcccCc-cHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCcEEeCccc
Confidence 8999999976 7777776432 35899999999999999999999 7899999999999999999999999999
Q ss_pred CCccCCCCC------CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHH
Q 005880 511 LSIFAPPST------VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQ 584 (672)
Q Consensus 511 ~a~~~~~~~------~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 584 (672)
++....... ..++..|+|||.+.. ...++.++|||||||++|||++|++||...... .....+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~---------~~~~~~~ 231 (302)
T cd07864 162 LARLYNSEESRPYTNKVITLWYRPPELLLG-EERYGPAIDVWSCGCILGELFTKKPIFQANQEL---------AQLELIS 231 (302)
T ss_pred ccccccCCcccccccceeccCccChHHhcC-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH---------HHHHHHH
Confidence 987654321 234667999997642 345688999999999999999999999643211 0011111
Q ss_pred HHHhhhcc---ccc--------cchhhcccc----ChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 585 SVVREEWT---AEV--------FDLELMRYK----DIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 585 ~~~~~~~~---~~~--------~d~~~~~~~----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
........ ..+ .+....... ........+.+++.+||+.||.+||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 232 RLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11100000 000 000000000 00011346788899999999999999999874
No 344
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2e-33 Score=284.03 Aligned_cols=242 Identities=26% Similarity=0.360 Sum_probs=194.5
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||++... +++.+|+|.+..... ....++.+|++++++++|+||+++++++.+....++||||++++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFG 84 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCC
Confidence 478999999999999844 688999999875432 24567788999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++..... ....+++..++.++.|+++||+||| +.+++||||+|+||++++++.+||+|||++......
T Consensus 85 ~L~~~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lh----~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 159 (256)
T cd08530 85 DLSKAISKRKK-KRKLIPEQEIWRIFIQLLRGLQALH----EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK 159 (256)
T ss_pred CHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcc
Confidence 99999876321 2346899999999999999999999 889999999999999999999999999998766443
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...++..|+|||.+. +..++.++|+||||+++|||++|+.||.... .......... .....
T Consensus 160 ~~~~~~~~~~Pe~~~--~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~------------~~~~~~~~~~-~~~~~---- 220 (256)
T cd08530 160 TQIGTPHYMAPEVWK--GRPYSYKSDIWSLGCLLYEMATFAPPFEARS------------MQDLRYKVQR-GKYPP---- 220 (256)
T ss_pred cccCCccccCHHHHC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHhc-CCCCC----
Confidence 344677899999654 5678889999999999999999999996432 1111111111 11100
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
........+.+++.+|+..+|++||++.|+++
T Consensus 221 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 221 ------IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ------CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11223456888999999999999999999975
No 345
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.1e-33 Score=288.44 Aligned_cols=262 Identities=22% Similarity=0.275 Sum_probs=191.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc--hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG--GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|++|.||+|... +|+.+|+|+++..... ....+.+|++++++++|+||+++++++.+++..++|+||+++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~- 82 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT- 82 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-
Confidence 467999999999999964 6899999998754332 456788999999999999999999999999999999999965
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST-- 519 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~-- 519 (672)
+|.+++.... ..+++..+..++.|+++||+||| +.+|+|+||||+||+++.++.++|+|||.+.......
T Consensus 83 ~l~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~ 154 (283)
T cd05118 83 DLYKLIKDRQ----RGLPESLIKSYLYQLLQGLAFCH----SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP 154 (283)
T ss_pred CHHHHHHhhc----ccCCHHHHHHHHHHHHHHHHHHH----HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc
Confidence 8888886542 35899999999999999999999 7899999999999999999999999999987665432
Q ss_pred ---CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCChhHHHHHHHh--hhc
Q 005880 520 ---VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG---CGGAVDLPRWVQSVVR--EEW 591 (672)
Q Consensus 520 ---~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~ 591 (672)
..++..|+|||.+.. ....+.++||||||+++|+|+||+.||......+... ...+.....+...... ...
T Consensus 155 ~~~~~~~~~~~~PE~~~~-~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 155 YTHYVVTRWYRAPELLLG-DKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred ccCccCcccccCcHHHhc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhh
Confidence 345678999997643 2368899999999999999999999986432110000 0000000000000000 000
Q ss_pred cccccchhhcc-ccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 TAEVFDLELMR-YKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 ~~~~~d~~~~~-~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.....+..... .........++.+++.+||+.||.+||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00000000000 0001123457889999999999999999999975
No 346
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=8e-33 Score=279.65 Aligned_cols=240 Identities=26% Similarity=0.377 Sum_probs=194.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e~~~ 439 (672)
.+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++|+||+++++.+... ...++|+||++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 84 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVS 84 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecC
Confidence 467999999999999966 689999999875542 3467889999999999999999999999988 88999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+++|.+++.... .+++..++.++.|+++||+||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 85 ~~~L~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh----~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 85 GGSLSSLLKKFG-----KLPEPVIRKYTRQILEGLAYLH----SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 999999997542 5899999999999999999999 789999999999999999999999999998766543
Q ss_pred ------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 519 ------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 519 ------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
...++..|+|||.+. +...+.++||||||+++|+|++|+.||.... +..............
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~--~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~~ 222 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIR--GEEYGRAADIWSLGCTVIEMATGKPPWSELG-----------NPMAALYKIGSSGEP 222 (260)
T ss_pred ccccccCCCCCccccCHhhhc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----------chHHHHHhccccCCC
Confidence 234677899999654 4458899999999999999999999996432 111111111110000
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
. .........+.+++.+|++.+|++||++.|+++
T Consensus 223 ~----------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 223 P----------EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred c----------CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 0 001122456888889999999999999999975
No 347
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=3.2e-33 Score=289.00 Aligned_cols=251 Identities=22% Similarity=0.266 Sum_probs=186.4
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|++|.||+|... +|+.||+|.+..... .....+.+|++++++++||||+++++++.+.+..++||||++ +
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 85 (294)
T PLN00009 7 VEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-L 85 (294)
T ss_pred EEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-c
Confidence 467999999999999965 689999999865332 234678899999999999999999999999999999999995 5
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-CCcEEEeccCCCccCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK-TGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~-~~~~kl~DfG~a~~~~~~-- 518 (672)
+|.+++.... ...+++..+..++.|++.||+||| +.+++||||+|+||+++. ++.+||+|||++......
T Consensus 86 ~l~~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~ 158 (294)
T PLN00009 86 DLKKHMDSSP---DFAKNPRLIKTYLYQILRGIAYCH----SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR 158 (294)
T ss_pred cHHHHHHhCC---CCCcCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcc
Confidence 8888875433 234688889999999999999999 789999999999999985 567999999999754322
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh--ccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE--WTA 593 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 593 (672)
...++..|+|||++.. ...++.++|||||||++|+|+||+.||...... +-+....... ...
T Consensus 159 ~~~~~~~~~~y~~PE~~~~-~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~------------~~~~~~~~~~~~~~~ 225 (294)
T PLN00009 159 TFTHEVVTLWYRAPEILLG-SRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI------------DELFKIFRILGTPNE 225 (294)
T ss_pred ccccCceeecccCHHHHhC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------------HHHHHHHHHhCCCCh
Confidence 2345678999997643 346788999999999999999999999653211 0011110000 000
Q ss_pred cc-------cchh--hc--cccC----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EV-------FDLE--LM--RYKD----IEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~-------~d~~--~~--~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .+.. .. .... ......++.+++.+|++.+|++||++.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 226 ETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 0000 00 0000 0112235778888999999999999999985
No 348
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.5e-33 Score=282.26 Aligned_cols=242 Identities=24% Similarity=0.421 Sum_probs=195.9
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||++... ++..||+|++..... .....+.+|++++++++|+|++++++.+...+..++|+||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~ 84 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGG 84 (258)
T ss_pred EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCC
Confidence 467999999999999965 689999999875433 45677899999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++..... ....+++..+..++.++++||+||| +.+++|+||+|+||++++++.++|+|||.+......
T Consensus 85 ~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh----~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 159 (258)
T cd08215 85 DLSQKIKKQKK-EGKPFPEEQILDWFVQLCLALKYLH----SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL 159 (258)
T ss_pred cHHHHHHHhhc-cCCCcCHHHHHHHHHHHHHHHHHHH----hCCEecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence 99999976431 2256899999999999999999999 789999999999999999999999999998765443
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||.+. +..++.++||||+|+++|+|++|+.||... +..+......... .
T Consensus 160 ~~~~~~~~~y~~pe~~~--~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~------------~~~~~~~~~~~~~-----~ 220 (258)
T cd08215 160 AKTVVGTPYYLSPELCQ--NKPYNYKSDIWSLGCVLYELCTLKHPFEGE------------NLLELALKILKGQ-----Y 220 (258)
T ss_pred ecceeeeecccChhHhc--cCCCCccccHHHHHHHHHHHHcCCCCCCCC------------cHHHHHHHHhcCC-----C
Confidence 234667899999654 456889999999999999999999998643 1222222222211 0
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.+ + + ......+.+++.+||..+|++|||+.|+++
T Consensus 221 ~~-~---~--~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 221 PP-I---P--SQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CC-C---C--CCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 0 0 112345778888999999999999999975
No 349
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.9e-33 Score=290.60 Aligned_cols=247 Identities=15% Similarity=0.180 Sum_probs=174.8
Q ss_pred HhcccCcCCeEEEEEEEEcC----CcEEEEEEcccCCcch--H---------HHHHHHHHHHcCCCCCceeeeEEEEEcC
Q 005880 364 SAEMLGKGGFGTAYKAVLDD----GSVVAVKRLKDASIGG--K---------REFEQHMEVLGRLRHPNLVGLKAYYFAR 428 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~--~---------~~~~~e~~~l~~l~h~niv~l~~~~~~~ 428 (672)
+.+.||+|+||.||+|...+ +..+|+|......... . .....+...+..++|+|++++++++...
T Consensus 16 i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~ 95 (294)
T PHA02882 16 IDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFK 95 (294)
T ss_pred EeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEe
Confidence 34679999999999999654 3456666543221111 1 1122334456678999999999977654
Q ss_pred C----eEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcE
Q 005880 429 E----EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNA 504 (672)
Q Consensus 429 ~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~ 504 (672)
. ..++++|++. .++.+.+... ...++..+..|+.|+++||+||| +.+|+||||||+|||++.++.+
T Consensus 96 ~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH----~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 96 RCRMYYRFILLEKLV-ENTKEIFKRI-----KCKNKKLIKNIMKDMLTTLEYIH----EHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred cCCceEEEEEEehhc-cCHHHHHHhh-----ccCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCcE
Confidence 3 3467888774 4676666532 23578889999999999999999 7899999999999999999999
Q ss_pred EEeccCCCccCCCC------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 005880 505 RVSDFGLSIFAPPS------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG 572 (672)
Q Consensus 505 kl~DfG~a~~~~~~------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~ 572 (672)
+|+|||+++..... ...+|..|+|||+.. +..++.++|||||||++|||++|+.||.......
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~--~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~--- 240 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHN--GACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG--- 240 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch---
Confidence 99999999754311 235788999999654 5678999999999999999999999997542211
Q ss_pred CCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 005880 573 CGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638 (672)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 638 (672)
....... .+....+...... .......+.+++..|++.+|++||++.++++.+
T Consensus 241 -----~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 241 -----NLIHAAK----CDFIKRLHEGKIK----IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred -----HHHHHhH----HHHHHHhhhhhhc----cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 1111000 0011111111111 112235678888899999999999999999876
No 350
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.4e-34 Score=296.82 Aligned_cols=238 Identities=24% Similarity=0.350 Sum_probs=195.1
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcc--hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIG--GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
...||+|.|+.|.+|+. .+|..||+|.+.+.... ..+.+.+|+++|..++|||||+++.+.......|+||||+.+|
T Consensus 61 ~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~g 140 (596)
T KOG0586|consen 61 IKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGG 140 (596)
T ss_pred eeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCc
Confidence 47899999999999994 46999999999865433 3456899999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
.+++++..+. .........++.|+.+|++|+| +..|+|||||++|||++.+.++||+|||++..+...
T Consensus 141 e~~~yl~~~g-----r~~e~~ar~~F~q~vsaveYcH----~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~l 211 (596)
T KOG0586|consen 141 ELFDYLVKHG-----RMKEKEARAKFRQIVSAVEYCH----SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLML 211 (596)
T ss_pred hhHHHHHhcc-----cchhhhhhhhhHHHHHHHHHHh----hcceeccccchhhcccccccceeeeccccceeecccccc
Confidence 9999998764 2556888899999999999999 899999999999999999999999999999887754
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
+.+|++.|.|||+++.. ...++.+|+||+|+++|.|+.|..||++..- ...-...++.
T Consensus 212 qt~cgsppyAaPEl~~g~-~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l------------k~Lr~rvl~g-------- 270 (596)
T KOG0586|consen 212 QTFCGSPPYAAPELFNGK-KYDGPEVDIWSLGVVLYALVEGSLPFDGQNL------------KELRPRVLRG-------- 270 (596)
T ss_pred cccCCCCCccChHhhcCc-ccCCcceehhhhhhhheeeeecccccCCccc------------ccccchheee--------
Confidence 67789999999998754 4678999999999999999999999975421 1111111111
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+..-+..+. .+..+++++++-.+|.+|++++++.+
T Consensus 271 -k~rIp~~ms---~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 271 -KYRIPFYMS---CDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred -eecccceee---chhHHHHHHhhccCccccCCHHHhhh
Confidence 111111111 23456777999999999999999865
No 351
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=6.4e-33 Score=285.41 Aligned_cols=250 Identities=23% Similarity=0.285 Sum_probs=187.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc--hHHHHHHHHHHHcCC---CCCceeeeEEEEEcCCe-----EEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG--GKREFEQHMEVLGRL---RHPNLVGLKAYYFAREE-----KLL 433 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~-----~~l 433 (672)
.+.||+|+||.||+|+.+ +++.||+|+++..... ....+.+|+.++.++ +|+||+++++++...+. .++
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 83 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL 83 (287)
T ss_pred EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence 467999999999999976 4899999999743221 234566777766555 69999999999988776 899
Q ss_pred EEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 434 VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
+|||+. ++|.+++..... ..+++..++.++.|+++||+||| +.+++|+||+|+||++++++.+||+|||++.
T Consensus 84 ~~e~~~-~~l~~~l~~~~~---~~l~~~~~~~~~~~i~~al~~LH----~~~i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 84 VFEHVD-QDLATYLSKCPK---PGLPPETIKDLMRQLLRGVDFLH----SHRIVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred Eehhcc-cCHHHHHHHccC---CCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCChhhEEEccCCCEEEeccCcce
Confidence 999996 589988875432 35899999999999999999999 7899999999999999999999999999987
Q ss_pred cCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 514 FAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 514 ~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
..... ...++..|+|||++. +..++.++|||||||++|||++|++||...... +........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~PE~~~--~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~------------~~~~~~~~~ 221 (287)
T cd07838 156 IYSFEMALTSVVVTLWYRAPEVLL--QSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA------------DQLDKIFDV 221 (287)
T ss_pred eccCCcccccccccccccChHHhc--cCCCCCcchhhhHHHHHHHHHhCCCcccCCChH------------HHHHHHHHH
Confidence 66433 234567899999764 457889999999999999999999998653221 111111111
Q ss_pred h-------cccc------ccchhhcc--ccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 590 E-------WTAE------VFDLELMR--YKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 590 ~-------~~~~------~~d~~~~~--~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
. +... .+...... ..........+.+++.+||+.||.+||++.|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 222 IGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0 0000 00000000 0001123356778999999999999999999974
No 352
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.1e-33 Score=289.45 Aligned_cols=249 Identities=24% Similarity=0.319 Sum_probs=193.3
Q ss_pred HhcccCcCCeEEEEEEEE----cCCcEEEEEEcccCCc----chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASI----GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLV 434 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 434 (672)
+.+.||+|++|.||+++. .+++.||||.+++... ...+.+.+|++++.++ +||||+++++.+..+...++|
T Consensus 4 ~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 83 (288)
T cd05583 4 LLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLI 83 (288)
T ss_pred EEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEE
Confidence 347899999999999984 3578899999875322 2345688999999999 599999999999999999999
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
|||+++|+|.+++... ..+++..+..++.|+++||+||| +.+++||||||+||+++.++.++|+|||+++.
T Consensus 84 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH----~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 84 LDYVNGGELFTHLYQR-----EHFTESEVRVYIAEIVLALDHLH----QLGIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EecCCCCcHHHHHhhc-----CCcCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 9999999999998643 34889999999999999999999 78999999999999999999999999999876
Q ss_pred CCCC------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 515 APPS------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 515 ~~~~------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
.... ...++..|+|||.+.......+.++||||||+++|||++|+.||...... .......+....
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--------~~~~~~~~~~~~ 226 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ--------NSQSEISRRILK 226 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc--------chHHHHHHHHHc
Confidence 5432 23467789999976543334788999999999999999999999643211 111122221111
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
.. +. .. ......+.+++.+||+.||++|||+.++.+.|+..
T Consensus 227 ~~-------~~--~~---~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 227 SK-------PP--FP---KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred cC-------CC--CC---cccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 10 00 00 11223567888899999999999999998877653
No 353
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=3.7e-33 Score=293.51 Aligned_cols=262 Identities=22% Similarity=0.307 Sum_probs=197.3
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC-----eEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE-----EKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~ 435 (672)
+.+.||+|++|.||+|+.. +|..||||++.... ....+.+.+|+++++.++|+||+++++++...+ ..++||
T Consensus 4 i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~ 83 (330)
T cd07834 4 LLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVT 83 (330)
T ss_pred eeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEe
Confidence 3578999999999999965 58999999987543 334578899999999999999999999988765 789999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||++ ++|.+++... .++++..+..++.|+++||+||| +.+|+||||||+||+++.++.++|+|||++...
T Consensus 84 e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~~l~~~l~~LH----~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 84 ELME-TDLHKVIKSP-----QPLTDDHIQYFLYQILRGLKYLH----SANVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred cchh-hhHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9997 5898888643 26999999999999999999999 789999999999999999999999999999765
Q ss_pred CCC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 516 PPS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 516 ~~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
... ...++..|+|||++... ..++.++||||||+++|+|++|+.||...... +......
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~------------~~~~~i~ 220 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSS-SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI------------DQLNLIV 220 (330)
T ss_pred cccccccccccccccccCcCCceeeecc-cCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH------------HHHHHHH
Confidence 433 23456779999976532 27889999999999999999999999654311 1111111
Q ss_pred hhh--------------ccccccch-hhcccc----ChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH--HHHHhcCCC
Q 005880 588 REE--------------WTAEVFDL-ELMRYK----DIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL--IEELRGVEV 646 (672)
Q Consensus 588 ~~~--------------~~~~~~d~-~~~~~~----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~--L~~i~~~~~ 646 (672)
... .....+.. ...... ........+.+++.+||+.+|++||++.++++. ++++...+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~ 300 (330)
T cd07834 221 EVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPED 300 (330)
T ss_pred HhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccccc
Confidence 000 00000000 000000 001123457888999999999999999999984 777665433
Q ss_pred CC
Q 005880 647 SP 648 (672)
Q Consensus 647 ~~ 648 (672)
..
T Consensus 301 ~~ 302 (330)
T cd07834 301 EP 302 (330)
T ss_pred CC
Confidence 33
No 354
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.5e-33 Score=287.94 Aligned_cols=263 Identities=24% Similarity=0.326 Sum_probs=192.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|++|.||+|+.. +++.||||++..... .......+|+..+.+++ |+||+++++++.+++..++||||+ +|
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 82 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EG 82 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CC
Confidence 467999999999999975 578999999875432 23334567899999999 999999999999999999999999 88
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++.... ...+++..+..++.|+++||.||| +.+++|+||+|+||++++++.++|+|||++......
T Consensus 83 ~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh----~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (283)
T cd07830 83 NLYQLMKDRK---GKPFSESVIRSIIYQILQGLAHIH----KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY 155 (283)
T ss_pred CHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc
Confidence 9999887543 235899999999999999999999 789999999999999999999999999999766542
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCC----CCCCCCChhHHHHHHHhhhccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGM----GCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
...++..|+|||++.. ...++.++||||||+++|||++|++||......+.. ...+...-..|...........
T Consensus 156 ~~~~~~~~~~aPE~~~~-~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 156 TDYVSTRWYRAPEILLR-STSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred CCCCCcccccCceeeec-CcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 3446778999997643 345788999999999999999999998654221100 0000000011111111110000
Q ss_pred cccchhhcc--ccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMR--YKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~--~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..+...... ..........+.+++.+||+.+|++|||+.|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000000 0000111356889999999999999999999975
No 355
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.5e-33 Score=296.95 Aligned_cols=260 Identities=19% Similarity=0.268 Sum_probs=187.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEc----CCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFA----REEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.++.+++||||+++++++.. ....++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 89 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDL 89 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEeh
Confidence 467999999999999954 68999999987532 2245677889999999999999999988763 3467899999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+. |+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||++.....
T Consensus 90 ~~-~~l~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 159 (334)
T cd07855 90 ME-SDLHHIIHSD-----QPLTEEHIRYFLYQLLRGLKYIH----SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSS 159 (334)
T ss_pred hh-hhHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCcEEecccccceeecc
Confidence 95 6899988643 34899999999999999999999 78999999999999999999999999999865432
Q ss_pred C---------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCChhHHHHH
Q 005880 518 S---------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG---CGGAVDLPRWVQS 585 (672)
Q Consensus 518 ~---------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~~~~ 585 (672)
. ...++..|+|||.+.. ...++.++|||||||++|||++|+.||.......... ...+.........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~ 238 (334)
T cd07855 160 SPTEHKYFMTEYVATRWYRAPELLLS-LPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNR 238 (334)
T ss_pred cCcCCCcccccccccccccChHHhcC-CcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhh
Confidence 1 2356778999997643 3457899999999999999999999996542110000 0000000000000
Q ss_pred HHhhhccccccchhhc-cccC----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 586 VVREEWTAEVFDLELM-RYKD----IEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 586 ~~~~~~~~~~~d~~~~-~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
... .......+.... .... .......+.+++.+||+.+|++||++.+++.
T Consensus 239 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 239 IGS-DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hch-hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000 000000000000 0000 0112456888999999999999999999886
No 356
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=8.8e-33 Score=291.90 Aligned_cols=270 Identities=21% Similarity=0.288 Sum_probs=190.2
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC------eEEEEE
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE------EKLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ 435 (672)
.+.||+|+||.||+|+. .+|+.||||+++... ......+.+|++++++++||||+++++++.... ..++|+
T Consensus 20 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 99 (342)
T cd07879 20 LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVM 99 (342)
T ss_pred EEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEe
Confidence 46899999999999995 468999999986532 123456889999999999999999999987542 468999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+.. +|..+.. ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 100 e~~~~-~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH----~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~ 167 (342)
T cd07879 100 PYMQT-DLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIH----SAGIIHRDLKPGNLAVNEDCELKILDFGLARHA 167 (342)
T ss_pred ccccc-CHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence 99964 7776652 24889999999999999999999 789999999999999999999999999999765
Q ss_pred CCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCChhHHHHHHHhhh
Q 005880 516 PPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG---CGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 516 ~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 590 (672)
... ...++..|+|||++.. ...++.++|||||||++|||++|+.||.......... ...+...+.+..... ..
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 245 (342)
T cd07879 168 DAEMTGYVVTRWYRAPEVILN-WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLE-DK 245 (342)
T ss_pred CCCCCCceeeecccChhhhcC-ccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhc-cc
Confidence 433 3345778999997642 2457889999999999999999999997432100000 000000000000000 00
Q ss_pred ccccccch-hhccccCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH--HHHHhcCCCCC
Q 005880 591 WTAEVFDL-ELMRYKDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVKL--IEELRGVEVSP 648 (672)
Q Consensus 591 ~~~~~~d~-~~~~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~--L~~i~~~~~~~ 648 (672)
........ ........ ......+.+++.+||+.||++||++.|++.. ++..+.....+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~~ 310 (342)
T cd07879 246 AAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEET 310 (342)
T ss_pred chHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccccccC
Confidence 00000000 00000000 0122357788999999999999999999944 77776544333
No 357
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.7e-32 Score=289.70 Aligned_cols=266 Identities=21% Similarity=0.274 Sum_probs=190.6
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC------eEEEEE
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE------EKLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ 435 (672)
.+.||+|+||.||+|.. .+|..||||++.... ......+.+|++++++++||||+++++++..+. ..++||
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 99 (343)
T cd07880 20 LKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVM 99 (343)
T ss_pred EEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEE
Confidence 46799999999999984 478999999986432 223456889999999999999999999987543 458999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+ +++|.+++.. ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 100 e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH----~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~ 168 (343)
T cd07880 100 PFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIH----AAGIIHRDLKPGNLAVNEDCELKILDFGLARQT 168 (343)
T ss_pred ecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence 999 7799888863 24899999999999999999999 889999999999999999999999999999766
Q ss_pred CCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCChhHHHHHHHhhh
Q 005880 516 PPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG---CGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 516 ~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 590 (672)
... ...++..|+|||.+.. ...++.++|||||||++|+|++|+.||.......... .........+........
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07880 169 DSEMTGYVVTRWYRAPEVILN-WMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSED 247 (343)
T ss_pred ccCccccccCCcccCHHHHhC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchh
Confidence 543 3456788999997642 2457899999999999999999999996432110000 000000011111110000
Q ss_pred ccccccchhhccc--cCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHH--HHHHHHhcC
Q 005880 591 WTAEVFDLELMRY--KDI----EEEMVGLLQVAMACTSASPDQRPNMSHVV--KLIEELRGV 644 (672)
Q Consensus 591 ~~~~~~d~~~~~~--~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl--~~L~~i~~~ 644 (672)
. ..... ..... ... ......+.+++.+|++.||++|||+.+++ ..++.....
T Consensus 248 ~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 248 A-KNYVK-KLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred H-HHHHH-hccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence 0 00000 00000 000 11223577899999999999999999998 445555433
No 358
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.4e-32 Score=288.38 Aligned_cols=261 Identities=21% Similarity=0.285 Sum_probs=188.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEc-CCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFA-REEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++.+++||||+++++++.. ....++|+||+ +
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~ 93 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-G 93 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-c
Confidence 478999999999999954 78999999886422 2245678899999999999999999999876 55788999998 5
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++... ++++.....++.|+++||+||| +.+|+||||+|+||++++++.++|+|||.+......
T Consensus 94 ~~L~~~~~~~------~~~~~~~~~~~~ql~~aL~~LH----~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 163 (328)
T cd07856 94 TDLHRLLTSR------PLEKQFIQYFLYQILRGLKYVH----SAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMT 163 (328)
T ss_pred cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcC
Confidence 6899888643 3788889999999999999999 889999999999999999999999999998765433
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCC---CCCCCCChhHHHHHHHhhhccccc
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGM---GCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||.+. .+..++.++|||||||++|||+||+.||......... ....+....++.............
T Consensus 164 ~~~~~~~y~aPE~~~-~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (328)
T cd07856 164 GYVSTRYYRAPEIML-TWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFV 242 (328)
T ss_pred CCcccccccCceeee-ccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHH
Confidence 345677899999753 2356889999999999999999999999643210000 000000111122111111100000
Q ss_pred cchhhccccChH----HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 596 FDLELMRYKDIE----EEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 596 ~d~~~~~~~~~~----~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
............ .....+.+++.+|++.+|++|||+.+++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 243 QSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000000 123567888999999999999999999755
No 359
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=9.2e-33 Score=291.77 Aligned_cols=259 Identities=23% Similarity=0.234 Sum_probs=184.4
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcC--------------C
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--------------E 429 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------------~ 429 (672)
.+.||+|+||.||+|.. .+|..||+|.+........+.+.+|++++++++||||+++++++... .
T Consensus 10 ~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (342)
T cd07854 10 LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELN 89 (342)
T ss_pred EEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccc
Confidence 46799999999999995 46899999998765555667889999999999999999999876543 3
Q ss_pred eEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-CCcEEEec
Q 005880 430 EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK-TGNARVSD 508 (672)
Q Consensus 430 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~-~~~~kl~D 508 (672)
..++||||++ ++|.+++... .+++..+..++.|+++||.||| +.+|+||||||+||+++. ++.+||+|
T Consensus 90 ~~~lv~e~~~-~~L~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH----~~givH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 90 SVYIVQEYME-TDLANVLEQG------PLSEEHARLFMYQLLRGLKYIH----SANVLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred eEEEEeeccc-ccHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEEcCCCceEEECC
Confidence 5689999996 5898888532 4889999999999999999999 789999999999999984 56789999
Q ss_pred cCCCccCCCC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCC---CCCC
Q 005880 509 FGLSIFAPPS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGC---GGAV 577 (672)
Q Consensus 509 fG~a~~~~~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~---~~~~ 577 (672)
||.++..... ...++..|+|||++.. +..++.++|||||||++|||++|+.||......+.... ....
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07854 159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLS-PNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV 237 (342)
T ss_pred cccceecCCccccccccccccccccccCHHHHhC-ccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9998755321 2245678999997542 45678899999999999999999999964321100000 0000
Q ss_pred ChhHHHHHHHhhhcccccc-chhhcccc---ChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 578 DLPRWVQSVVREEWTAEVF-DLELMRYK---DIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~-d~~~~~~~---~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
............ ...... +......+ .......++.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 238 VREEDRNELLNV-IPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CChHHhhhhhhh-hhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000000000000 000000 00000000 00112245778899999999999999999984
No 360
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-34 Score=284.67 Aligned_cols=191 Identities=28% Similarity=0.444 Sum_probs=169.8
Q ss_pred cccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+||+|+||.||-+.. .+|+.+|.|++.+.... .+.....|-.+|++++.+.||.+-..|...+..++|+..|.||
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGG 270 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGG 270 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCC
Confidence 5799999999999994 47999999988654432 4456788999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.-+|.... ..-+++....-++.+|+-||++|| +.+||.||+||+|||+|+.|+++|+|.|+|..+...
T Consensus 271 DLkfHiyn~g---~~gF~e~ra~FYAAEi~cGLehlH----~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~ 343 (591)
T KOG0986|consen 271 DLKFHIYNHG---NPGFDEQRARFYAAEIICGLEHLH----RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPI 343 (591)
T ss_pred ceeEEeeccC---CCCCchHHHHHHHHHHHhhHHHHH----hcceeeccCChhheeeccCCCeEeeccceEEecCCCCcc
Confidence 9999987654 255999999999999999999999 889999999999999999999999999999888765
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
..+||.||||||++. +..|+...|.||+||++|||+.|+.||...
T Consensus 344 ~~rvGT~GYMAPEvl~--ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~ 389 (591)
T KOG0986|consen 344 RGRVGTVGYMAPEVLQ--NEVYDFSPDWFSLGCLLYEMIAGHSPFRQR 389 (591)
T ss_pred ccccCcccccCHHHHc--CCcccCCccHHHHHhHHHHHHcccCchhhh
Confidence 457899999999886 446999999999999999999999999654
No 361
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.8e-33 Score=295.17 Aligned_cols=266 Identities=19% Similarity=0.235 Sum_probs=190.5
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccC--CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcC-----CeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDA--SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR-----EEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e 436 (672)
.+.||+|+||.||+|+. .+|+.||||.++.. .......+.+|+.+++.++|+||+++++++... ...++|||
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 89 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYE 89 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEe
Confidence 46799999999999995 46899999998753 222345678899999999999999999988654 34799999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|+. ++|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++...
T Consensus 90 ~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH----~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 90 LMD-TDLHQIIRSS-----QTLSDDHCQYFLYQLLRGLKYIH----SANVLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred CCC-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 995 6898888643 34899999999999999999999 7899999999999999999999999999997654
Q ss_pred CC-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCChhHHHHHHHh
Q 005880 517 PS-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG---CGGAVDLPRWVQSVVR 588 (672)
Q Consensus 517 ~~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 588 (672)
.. ...++..|+|||.+.. ...++.++|||||||++|+|++|+.||.......... ...+....+.......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07858 160 EKGDFMTEYVVTRWYRAPELLLN-CSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRN 238 (337)
T ss_pred CCcccccccccccCccChHHHhc-CCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCc
Confidence 33 2346778999997643 2358899999999999999999999996432100000 0000000000000000
Q ss_pred ---hhccc---cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH--HHHHhc
Q 005880 589 ---EEWTA---EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL--IEELRG 643 (672)
Q Consensus 589 ---~~~~~---~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~--L~~i~~ 643 (672)
..... ...+..... ........+.+++.+||+.+|++|||+.|+++. ++.+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~ 299 (337)
T cd07858 239 EKARRYIRSLPYTPRQSFAR--LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299 (337)
T ss_pred hhhhHHHHhcCcccccCHHH--HcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence 00000 000000000 001223457889999999999999999999876 665543
No 362
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-34 Score=270.16 Aligned_cols=243 Identities=22% Similarity=0.299 Sum_probs=189.1
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEc----CCeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFA----REEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~~~lv~e~ 437 (672)
..++||-|-.|.|..+.. .+|+.+|+|++.+ ....++|++.--.. .|||||+++++|.. .....+|||.
T Consensus 66 s~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~ 140 (400)
T KOG0604|consen 66 SWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMEC 140 (400)
T ss_pred hhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeec
Confidence 458999999999999994 4799999999974 34567788764444 69999999999864 3456799999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC---CCcEEEeccCCCcc
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK---TGNARVSDFGLSIF 514 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~---~~~~kl~DfG~a~~ 514 (672)
|+||.|+..++... ...+++.+.-.|+.||+.|+.||| +.+|.||||||+|+|... +-.+||+|||+|+.
T Consensus 141 meGGeLfsriq~~g---~~afTErea~eI~~qI~~Av~~lH----~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~ 213 (400)
T KOG0604|consen 141 MEGGELFSRIQDRG---DQAFTEREASEIMKQIGLAVRYLH----SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKE 213 (400)
T ss_pred ccchHHHHHHHHcc---cccchHHHHHHHHHHHHHHHHHHH----hcchhhccCChhheeeecCCCCcceEecccccccc
Confidence 99999999998664 467999999999999999999999 899999999999999964 45699999999987
Q ss_pred CCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 515 APPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 515 ~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
.... +..-|+.|.|||++. ..+|+...|+||+||++|-|+.|.+||....+.. +..=++..++.+
T Consensus 214 t~~~~~L~TPc~TPyYvaPevlg--~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a---------ispgMk~rI~~g 282 (400)
T KOG0604|consen 214 TQEPGDLMTPCFTPYYVAPEVLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---------ISPGMKRRIRTG 282 (400)
T ss_pred cCCCccccCCcccccccCHHHhC--chhcCCCCCccchhHHHHHhhcCCCcccccCCcc---------CChhHHhHhhcc
Confidence 7643 445578899999875 4579999999999999999999999998654321 111122222221
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
. .++-+ +......+...++|+..|+.+|.+|.|+.|+++
T Consensus 283 q-y~FP~------pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 283 Q-YEFPE------PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred C-ccCCC------hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 1 11111 122334455677888999999999999999974
No 363
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.6e-32 Score=277.50 Aligned_cols=239 Identities=23% Similarity=0.325 Sum_probs=185.0
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccC-----CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDA-----SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 435 (672)
+.+.||+|+||.||+|.. .+|..||+|.+... .......+.+|++++++++|+||+++++++.+. ...++|+
T Consensus 6 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~ 85 (264)
T cd06653 6 LGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFV 85 (264)
T ss_pred eeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEE
Confidence 357899999999999995 46899999987532 122346788999999999999999999998764 4578999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+++++|.+++... ..+++....+++.|++.||.||| +.+++||||||+||+++.++.++|+|||+++..
T Consensus 86 e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~al~~LH----~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 86 EYMPGGSIKDQLKAY-----GALTENVTRRYTRQILQGVSYLH----SNMIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EeCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 999999999998743 24789999999999999999999 789999999999999999999999999999754
Q ss_pred CCC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 516 PPS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 516 ~~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
... ...++..|+|||++. +..++.++|||||||++|||++|+.||.... ...-+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------------~~~~~~~~~ 222 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVIS--GEGYGRKADVWSVACTVVEMLTEKPPWAEYE------------AMAAIFKIA 222 (264)
T ss_pred ccccccCccccccCCcccccCHhhhc--CCCCCccccHHHHHHHHHHHHhCCCCCCccC------------HHHHHHHHH
Confidence 321 234677899999764 4567899999999999999999999996321 111111111
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.... .. . .. ......+.+++.+|+. +|..||++.+++.
T Consensus 223 ~~~~-~~----~--~p---~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 223 TQPT-KP----M--LP---DGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred cCCC-CC----C--CC---cccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 1100 00 0 01 1122456777889999 5799999998764
No 364
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=9.1e-33 Score=290.70 Aligned_cols=292 Identities=20% Similarity=0.178 Sum_probs=197.0
Q ss_pred hcccCcCCeEEEEEEEEc-C--CcEEEEEEcccCC--cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcC----CeEEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-D--GSVVAVKRLKDAS--IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAR----EEKLLV 434 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~--g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----~~~~lv 434 (672)
.+.||+|+||.||+++.. . +..||+|++.... ....+.+.+|++++.++ +||||+++++++... ...+++
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 84 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLY 84 (332)
T ss_pred EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEE
Confidence 467999999999999955 3 7899999987432 12356788899999999 599999999875432 356788
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
+||+. ++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 85 ~e~~~-~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH----~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 85 EELME-ADLHQIIRSG-----QPLTDAHFQSFIYQILCGLKYIH----SANVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred Eeccc-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 89885 6899988643 35899999999999999999999 78999999999999999999999999999975
Q ss_pred CCCC---------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCChhHH
Q 005880 515 APPS---------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG---CGGAVDLPRW 582 (672)
Q Consensus 515 ~~~~---------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~ 582 (672)
.... ...++..|+|||++.. ...++.++|||||||++|+|++|+.||.......... ...+....++
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLS-FQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhC-CCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 5421 2356788999997542 3567899999999999999999999986432110000 0000000011
Q ss_pred HHHHHhhhccccccchhhccccCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCC
Q 005880 583 VQSVVREEWTAEVFDLELMRYKDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPCHENFDSVSD 658 (672)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~~~~~~~~~ 658 (672)
........................ ......+.+++.+|++.||++|||+.|+++. .-++....+...+.|...++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~-~~~~~~~~~~~~~~~~~~~~ 312 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH-PYLAIWHDPDDEPVCQKPFD 312 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC-hhhhhhcCcccccccccccc
Confidence 111111000000000000000000 0113467889999999999999999998743 11222222333344555565
Q ss_pred CCCccCCCCC
Q 005880 659 SPCLSEDTLG 668 (672)
Q Consensus 659 ~~~~~~~~~~ 668 (672)
-+...+|+-+
T Consensus 313 ~~~~~~~~~~ 322 (332)
T cd07857 313 FSFESEDSME 322 (332)
T ss_pred CCccccccHH
Confidence 5555555433
No 365
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.2e-32 Score=286.88 Aligned_cols=250 Identities=22% Similarity=0.280 Sum_probs=183.5
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc--hHHHHHHHHHHHcCCCCCceeeeEEEEEcCC--------eEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG--GKREFEQHMEVLGRLRHPNLVGLKAYYFARE--------EKLL 433 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--------~~~l 433 (672)
.+.||+|+||.||+|... +++.||||++...... ....+.+|++++++++||||+++++++.... ..++
T Consensus 13 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~l 92 (311)
T cd07866 13 LGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYM 92 (311)
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEE
Confidence 467999999999999955 6899999998643322 2346788999999999999999999876443 4589
Q ss_pred EEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 434 VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
|+||+.+ +|...+.... ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++
T Consensus 93 v~~~~~~-~l~~~~~~~~----~~~~~~~~~~i~~~l~~al~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 93 VTPYMDH-DLSGLLENPS----VKLTESQIKCYMLQLLEGINYLH----ENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred EEecCCc-CHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 9999965 7777776432 35899999999999999999999 7899999999999999999999999999987
Q ss_pred cCCCCC----------------CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCC
Q 005880 514 FAPPST----------------VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAV 577 (672)
Q Consensus 514 ~~~~~~----------------~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~ 577 (672)
...... ..++..|+|||.+.. ...++.++|||||||++|||++|++||......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~--------- 233 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG-ERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI--------- 233 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhC-CCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH---------
Confidence 554321 123566999997642 345789999999999999999999999643221
Q ss_pred ChhHHHHHHHhhh------------ccccccc-hhh-ccccCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 578 DLPRWVQSVVREE------------WTAEVFD-LEL-MRYKDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 578 ~~~~~~~~~~~~~------------~~~~~~d-~~~-~~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.......... ......+ ... ...... ......+.+++.+|++.||++|||+.|++.
T Consensus 234 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 234 ---DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred ---HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1111111000 0000000 000 000000 111246788999999999999999999874
No 366
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.4e-32 Score=275.18 Aligned_cols=231 Identities=28% Similarity=0.380 Sum_probs=187.3
Q ss_pred cCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 368 LGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 368 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
||+|+||.||++... +++.+|+|.+...... ....+..|++++++++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999965 5899999998754332 345789999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++.... .+++..+..++.|+++||.||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lh----~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~ 151 (250)
T cd05123 81 FSHLSKEG-----RFSEERARFYAAEIVLALEYLH----SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTN 151 (250)
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCccc
Confidence 99997543 4899999999999999999999 789999999999999999999999999998765442
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...++..|+|||... +...+.++|+||||+++||+++|+.||.... ............
T Consensus 152 ~~~~~~~~~~Pe~~~--~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~------------~~~~~~~~~~~~-------- 209 (250)
T cd05123 152 TFCGTPEYLAPEVLL--GKGYGKAVDWWSLGVLLYEMLTGKPPFYAED------------RKEIYEKILKDP-------- 209 (250)
T ss_pred CCcCCccccChHHhC--CCCCCchhhHHHHHHHHHHHHHCCCCCCCCC------------HHHHHHHHhcCC--------
Confidence 345677899999654 4567889999999999999999999996431 112222222111
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSH 633 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e 633 (672)
..... .....+.+++.+||..||++||++.+
T Consensus 210 -~~~~~---~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 210 -LRFPE---FLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred -CCCCC---CCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 00001 11345778888999999999999955
No 367
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=3.2e-32 Score=287.93 Aligned_cols=188 Identities=26% Similarity=0.385 Sum_probs=158.2
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC------CeEEEEE
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR------EEKLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ 435 (672)
.+.||+|+||.||+|.. .+|+.||+|+++... ....+.+.+|++++.+++||||+++++++... ...++++
T Consensus 22 ~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 101 (345)
T cd07877 22 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 101 (345)
T ss_pred EEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEe
Confidence 36799999999999984 578999999987532 22356788899999999999999999988643 3467888
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
+++ +++|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 102 ~~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~ 170 (345)
T cd07877 102 HLM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 170 (345)
T ss_pred hhc-ccCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCChHHEEEcCCCCEEEecccccccc
Confidence 877 78998888642 3899999999999999999999 789999999999999999999999999998765
Q ss_pred CCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 516 PPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 516 ~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
... ...++..|+|||++.. ...++.++|||||||++|||++|+.||..
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 171 DDEMTGYVATRWYRAPEIMLN-WMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred cccccccccCCCccCHHHHhC-ccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 443 3456788999997642 24678899999999999999999999954
No 368
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=4.8e-33 Score=294.06 Aligned_cols=259 Identities=21% Similarity=0.275 Sum_probs=188.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCe------EEEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREE------KLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~lv~ 435 (672)
...||+|++|.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++...+. .++|+
T Consensus 20 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 99 (343)
T cd07851 20 LSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVT 99 (343)
T ss_pred EEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEE
Confidence 467999999999999965 58899999986432 2234667889999999999999999998876554 89999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+ +++|.+++.. .++++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||++...
T Consensus 100 e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH----~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 100 HLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIH----SAGIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred ecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 999 6799999864 24899999999999999999999 789999999999999999999999999999765
Q ss_pred CCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCChhHHHHHHHhhh
Q 005880 516 PPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG---CGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 516 ~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 590 (672)
... ...++..|+|||++.. ...++.++|||||||++|||++|+.||.......... .........+......+.
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07851 169 DDEMTGYVATRWYRAPEIMLN-WMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSES 247 (343)
T ss_pred cccccCCcccccccCHHHHhC-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchh
Confidence 433 3456778999997642 2367889999999999999999999996432110000 000000001111000000
Q ss_pred ccccccch-hhccccChH----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 591 WTAEVFDL-ELMRYKDIE----EEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 591 ~~~~~~d~-~~~~~~~~~----~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....+.. ......... .....+.+++.+||+.||++|||+.||++
T Consensus 248 -~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 248 -ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred -HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000000 000000000 12356888999999999999999999974
No 369
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.1e-32 Score=279.69 Aligned_cols=242 Identities=22% Similarity=0.310 Sum_probs=186.8
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccC-----CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA-----SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
+.+.||+|+||.||+++.. .+..+++|.++.. ......++.+|+.++++++||||+++++++.+....++||||
T Consensus 4 i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (260)
T cd08222 4 LQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEY 83 (260)
T ss_pred eeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEe
Confidence 4578999999999999854 3455666665532 122345677899999999999999999999988999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++++|.+++..... ....+++..++.++.|+++||.||| +.+++|+||||+||++++ +.++|+|||.+.....
T Consensus 84 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~ 157 (260)
T cd08222 84 CEGRDLDCKLEELKH-TGKTLSENQVCEWFIQLLLGVHYMH----QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG 157 (260)
T ss_pred CCCCCHHHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHH----HcCccccCCChhheEeec-CCEeecccCceeecCC
Confidence 999999998875322 2246899999999999999999999 789999999999999975 5699999999876543
Q ss_pred C-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 518 S-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 518 ~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
. ...++..|+|||.+ .+..++.++||||||+++|+|++|+.||... ............. .
T Consensus 158 ~~~~~~~~~~~~~~~~pe~~--~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~------------~~~~~~~~~~~~~-~ 222 (260)
T cd08222 158 SCDLATTFTGTPYYMSPEAL--KHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ------------NFLSVVLRIVEGP-T 222 (260)
T ss_pred CcccccCCCCCcCccCHHHH--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCc------------cHHHHHHHHHcCC-C
Confidence 2 34467789999965 3456788999999999999999999998532 1222222221110 0
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+ .........+.+++.+||+.+|++||++.|+++
T Consensus 223 -----~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 223 -----P-----SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -----C-----CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 0 001223346788999999999999999999975
No 370
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=9.8e-33 Score=282.87 Aligned_cols=236 Identities=25% Similarity=0.350 Sum_probs=189.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++.+++ ||||+++++++.+.+..++||||++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAP 85 (280)
T ss_pred eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCC
Confidence 467999999999999965 68999999987532 223467889999999998 9999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCC
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST 519 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 519 (672)
+++|.+++.... .+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 86 ~~~L~~~l~~~~-----~l~~~~~~~i~~ql~~~l~~Lh----~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 86 NGELLQYIRKYG-----SLDEKCTRFYAAEILLALEYLH----SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 999999997542 5999999999999999999999 7899999999999999999999999999987554321
Q ss_pred -------------------------CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 005880 520 -------------------------VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCG 574 (672)
Q Consensus 520 -------------------------~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~ 574 (672)
..++..|+|||++. ...++.++||||||++++++++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~--~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-------- 226 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN--EKPAGKSSDLWALGCIIYQMLTGKPPFRGSN-------- 226 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhC--CCCCChhhhHHHHHHHHHHHHhCCCCCCCcc--------
Confidence 23467899999654 4568899999999999999999999996432
Q ss_pred CCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH----HHHH
Q 005880 575 GAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM----SHVV 635 (672)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~----~evl 635 (672)
............. ... ......+.+++.+||+.+|.+||++ .|++
T Consensus 227 ----~~~~~~~~~~~~~---------~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll 275 (280)
T cd05581 227 ----EYLTFQKILKLEY---------SFP---PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELK 275 (280)
T ss_pred ----HHHHHHHHHhcCC---------CCC---CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHh
Confidence 1111111111100 000 1123457788889999999999999 6665
No 371
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2e-32 Score=281.04 Aligned_cols=250 Identities=25% Similarity=0.335 Sum_probs=191.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|++|.||+|+.. +++.||+|.+.... ....+.+.+|++++++++|+||+++++++.+.+..++||||++ +
T Consensus 4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~ 82 (282)
T cd07829 4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-M 82 (282)
T ss_pred ehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-c
Confidence 367999999999999965 58999999997643 2235678889999999999999999999999999999999997 5
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++.... ..+++..+..++.|+++||+||| +.+|+||||+|+||++++++.+||+|||.++.....
T Consensus 83 ~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 154 (282)
T cd07829 83 DLKKYLDKRP----GPLSPNLIKSIMYQLLRGLAYCH----SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT 154 (282)
T ss_pred CHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccc
Confidence 9999997542 35899999999999999999999 789999999999999999999999999998765433
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh------
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE------ 590 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 590 (672)
....+..|+|||.+.. ...++.++|||||||++|||++|+.||..+.. .+.+.......
T Consensus 155 ~~~~~~~~~~~aPE~~~~-~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~ 221 (282)
T cd07829 155 YTHEVVTLWYRAPEILLG-SKHYSTAVDIWSVGCIFAEMITGKPLFPGDSE------------IDQLFKIFQILGTPTEE 221 (282)
T ss_pred cCccccCcCcCChHHhcC-CcCCCccccHHHHHHHHHHHHhCCCCCCCccH------------HHHHHHHHHHhCCCcHH
Confidence 2234567999997643 24788899999999999999999999865321 11111111000
Q ss_pred cc---ccc--cchhhccc------cChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 591 WT---AEV--FDLELMRY------KDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 591 ~~---~~~--~d~~~~~~------~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. ... .+...... .........+.+++.+||+.||++||++.+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 222 SWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00 000 00000000 000111346889999999999999999999974
No 372
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-32 Score=268.47 Aligned_cols=248 Identities=24% Similarity=0.287 Sum_probs=198.1
Q ss_pred cccCcCCeEEEEEEEEcC------CcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC-CeEEEEEee
Q 005880 366 EMLGKGGFGTAYKAVLDD------GSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR-EEKLLVSEY 437 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~ 437 (672)
..+-+|.||.||+|.+.+ .+.|-||.++... .-....+..|--.+..+.|||+.++.+++.++ +..+++|.+
T Consensus 290 ~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~ 369 (563)
T KOG1024|consen 290 CLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPA 369 (563)
T ss_pred hhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEec
Confidence 468899999999996543 4567788887543 22456778888889999999999999998754 567899999
Q ss_pred cCCCChhHHhhcCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 438 MPNGSLFWLLHGNRG---PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
+.-|+|..+|...++ ...+.++-.+...++.|++.|++||| +++|||.||.++|.+||+..++||+|=.+++.
T Consensus 370 ~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh----~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRD 445 (563)
T KOG1024|consen 370 TGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH----NHGVIHKDIAARNCVIDDQLQVKLTDSALSRD 445 (563)
T ss_pred cCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH----hcCcccchhhhhcceehhheeEEeccchhccc
Confidence 999999999983332 23456788889999999999999999 89999999999999999999999999999998
Q ss_pred CCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 515 APPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 515 ~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
+-+. ...+...||+||.+. ...|+.++|||||||++|||+| |+.|+. +.|..+....+
T Consensus 446 LFP~DYhcLGDnEnRPvkWMslEal~--n~~yssasDvWsfGVllWELmtlg~~Pya------------eIDPfEm~~yl 511 (563)
T KOG1024|consen 446 LFPGDYHCLGDNENRPVKWMSLEALQ--NSHYSSASDVWSFGVLLWELMTLGKLPYA------------EIDPFEMEHYL 511 (563)
T ss_pred cCcccccccCCCCCCcccccCHHHHh--hhhhcchhhhHHHHHHHHHHHhcCCCCcc------------ccCHHHHHHHH
Confidence 7665 233456799999654 6789999999999999999998 888985 23433333333
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
.+.... .....++.+++.++.-||+.+|++||+++|++.-|.++.
T Consensus 512 kdGyRl-----------aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 512 KDGYRL-----------AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred hcccee-----------cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 332221 112345567999999999999999999999999998874
No 373
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-34 Score=269.47 Aligned_cols=193 Identities=27% Similarity=0.376 Sum_probs=162.5
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEccc--CCcchHHHHHHHHHHHcCCCCCceeeeEEEEEc--------CCeEEE
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKD--ASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA--------REEKLL 433 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------~~~~~l 433 (672)
..+||+|.||.||+|+. ++|+.||+|++-- ...+......+|+++|..++|+|++.++..|.. ....|+
T Consensus 22 ~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~yl 101 (376)
T KOG0669|consen 22 LAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYL 101 (376)
T ss_pred HHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeee
Confidence 47899999999999994 4688899987642 223345677899999999999999999888753 234789
Q ss_pred EEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 434 VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
||++|+. +|.-+|.... ..++..++.+++.++..||.|+| +..|+|||+||.|+||+.+|.+||+|||+++
T Consensus 102 Vf~~ceh-DLaGlLsn~~----vr~sls~Ikk~Mk~Lm~GL~~iH----r~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 102 VFDFCEH-DLAGLLSNRK----VRFSLSEIKKVMKGLMNGLYYIH----RNKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred eHHHhhh-hHHHHhcCcc----ccccHHHHHHHHHHHHHHHHHHH----HhhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 9999977 8988886543 56999999999999999999999 8899999999999999999999999999997
Q ss_pred cCCCC---------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Q 005880 514 FAPPS---------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGG 567 (672)
Q Consensus 514 ~~~~~---------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~ 567 (672)
.+... ..+.|..|++||.+.+ ...|+++.|||+.|||+.||+||.+-+.+..+
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG-~r~yg~~iDiWgAgCimaeMwtrspimqgnte 234 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLG-DREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE 234 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhc-ccccCCcchhHhHHHHHHHHHccCccccCChH
Confidence 66543 2233778999998875 47899999999999999999999998876654
No 374
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-33 Score=268.86 Aligned_cols=238 Identities=26% Similarity=0.389 Sum_probs=190.2
Q ss_pred cCHHHHHHHHhcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcchHHHH---HHHHHHHcCCCCCceeeeEEEEEcCCe
Q 005880 355 FELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVGLKAYYFAREE 430 (672)
Q Consensus 355 ~~~~~l~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~---~~e~~~l~~l~h~niv~l~~~~~~~~~ 430 (672)
.+.+|. .+.++||+|.||.|-+++ ..+|+.+|+|++++.-+-.+.+. ..|-++|+..+||.+..+-..|...++
T Consensus 165 vTm~dF--dfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~dr 242 (516)
T KOG0690|consen 165 VTMEDF--DFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDR 242 (516)
T ss_pred eccchh--hHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCce
Confidence 344443 345789999999999999 45799999999997665544443 568889999999999999989999999
Q ss_pred EEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 431 KLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 431 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
.+.||||+.||.|+.+|.+.+ .+++....-+-..|+.||.||| +.+||.||||.+|.++|.||++||.|||
T Consensus 243 lCFVMeyanGGeLf~HLsrer-----~FsE~RtRFYGaEIvsAL~YLH----s~~ivYRDlKLENLlLDkDGHIKitDFG 313 (516)
T KOG0690|consen 243 LCFVMEYANGGELFFHLSRER-----VFSEDRTRFYGAEIVSALGYLH----SRNIVYRDLKLENLLLDKDGHIKITDFG 313 (516)
T ss_pred EEEEEEEccCceEeeehhhhh-----cccchhhhhhhHHHHHHhhhhh----hCCeeeeechhhhheeccCCceEeeecc
Confidence 999999999999999997654 4778877888899999999999 8899999999999999999999999999
Q ss_pred CCccCCC-----CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 005880 511 LSIFAPP-----STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQS 585 (672)
Q Consensus 511 ~a~~~~~-----~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 585 (672)
+++..-. .+.+||+.|.|||++. ...|+.++|.|.+|||+|||+.|+.||..... ...+.-
T Consensus 314 LCKE~I~~g~t~kTFCGTPEYLAPEVle--DnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh------------~kLFeL 379 (516)
T KOG0690|consen 314 LCKEEIKYGDTTKTFCGTPEYLAPEVLE--DNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH------------EKLFEL 379 (516)
T ss_pred cchhcccccceeccccCChhhcCchhhc--cccccceeehhhhhHHHHHHHhccCcccccch------------hHHHHH
Confidence 9975432 3788999999999875 57899999999999999999999999975321 112222
Q ss_pred HHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCC
Q 005880 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP 629 (672)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP 629 (672)
+.-+ .+.-+..+.++... |+...|.+||.+|.
T Consensus 380 Il~e---------d~kFPr~ls~eAkt---LLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 380 ILME---------DLKFPRTLSPEAKT---LLSGLLKKDPKKRL 411 (516)
T ss_pred HHhh---------hccCCccCCHHHHH---HHHHHhhcChHhhc
Confidence 2211 11222233444444 44488999999996
No 375
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=5.1e-32 Score=308.26 Aligned_cols=140 Identities=26% Similarity=0.399 Sum_probs=125.4
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.++||+|+||.||+|... +++.||||+++.... .....+.+|+.++..++||||+++++++...+..++||||+++
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g 88 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIG 88 (669)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCC
Confidence 478999999999999965 689999999975432 2346788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
++|.+++.... .+++..++.|+.||+.||+||| ..+|+||||||+|||++.++.+||+|||+++
T Consensus 89 ~~L~~li~~~~-----~l~~~~~~~i~~qil~aL~yLH----~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 89 GDVKSLLHIYG-----YFDEEMAVKYISEVALALDYLH----RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999997542 4789999999999999999999 7899999999999999999999999999874
No 376
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=3.6e-32 Score=271.83 Aligned_cols=220 Identities=20% Similarity=0.229 Sum_probs=173.0
Q ss_pred CCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChhHHhhc
Q 005880 371 GGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHG 449 (672)
Q Consensus 371 G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 449 (672)
|.+|.||+++. .+|+.||+|+++... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 89999999995 468999999997543 234455555566799999999999999999999999999999999865
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--CCCCCCccc
Q 005880 450 NRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--TVPRSNGYR 527 (672)
Q Consensus 450 ~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~~~t~~y~ 527 (672)
. ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.++++|||.+...... ...++..|+
T Consensus 79 ~-----~~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~ 149 (237)
T cd05576 79 F-----LNIPEECVKRWAAEMVVALDALH----REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYC 149 (237)
T ss_pred h-----cCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCcccc
Confidence 4 24899999999999999999999 789999999999999999999999999987655443 334466799
Q ss_pred CCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChH
Q 005880 528 APELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIE 607 (672)
Q Consensus 528 aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (672)
|||.+ .+..++.++||||+|+++|||++|+.|+....... ... .. + .. ..
T Consensus 150 aPE~~--~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------------------~~~--~~-~--~~--~~--- 199 (237)
T cd05576 150 APEVG--GISEETEACDWWSLGAILFELLTGKTLVECHPSGI------------------NTH--TT-L--NI--PE--- 199 (237)
T ss_pred CCccc--CCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------------------ccc--cc-c--CC--cc---
Confidence 99965 34567899999999999999999998875321100 000 00 0 00 01
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHH
Q 005880 608 EEMVGLLQVAMACTSASPDQRPNMSHV 634 (672)
Q Consensus 608 ~~~~~l~~li~~Cl~~dP~~RPt~~ev 634 (672)
.....+.+++.+|++.||++||++.+.
T Consensus 200 ~~~~~~~~li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 200 WVSEEARSLLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred cCCHHHHHHHHHHccCCHHHhcCCCcc
Confidence 112356778889999999999998544
No 377
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=3.2e-32 Score=240.91 Aligned_cols=190 Identities=25% Similarity=0.355 Sum_probs=164.0
Q ss_pred HhcccCcCCeEEEEEEE-EcCCcEEEEEEccc--CCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKD--ASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
-.++||+|.||+||+|+ .++++.||+|+++- ....-.....+|+-+++.++|.|||++++....++..-+|+|||.
T Consensus 6 kmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd- 84 (292)
T KOG0662|consen 6 KMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD- 84 (292)
T ss_pred HHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh-
Confidence 35789999999999999 55689999999873 333345678899999999999999999999999999999999994
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
.+|..+...-. ..++.+....++.|+++||.|.| ++++.|||+||.|.+|+.+|+.|++|||+++.+.-.
T Consensus 85 qdlkkyfdsln----g~~d~~~~rsfmlqllrgl~fch----shnvlhrdlkpqnllin~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 85 QDLKKYFDSLN----GDLDPEIVRSFMLQLLRGLGFCH----SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred HHHHHHHHhcC----CcCCHHHHHHHHHHHHhhhhhhh----hhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence 48988887654 35889999999999999999999 899999999999999999999999999999877543
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhC-CCCCC
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTG-KCPSV 563 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg-~~P~~ 563 (672)
....|..|++|.++.. ..-|++..|+||-|||+.|+... ++-|.
T Consensus 157 cysaevvtlwyrppdvlfg-akly~tsidmwsagcifaelanagrplfp 204 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFG-AKLYSTSIDMWSAGCIFAELANAGRPLFP 204 (292)
T ss_pred eeeceeeeeeccCcceeee-eehhccchHhhhcchHHHHHhhcCCCCCC
Confidence 3456788999999875 46789999999999999999974 44453
No 378
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-33 Score=278.11 Aligned_cols=260 Identities=25% Similarity=0.338 Sum_probs=195.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCC--CC----ceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLR--HP----NLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--h~----niv~l~~~~~~~~~~~lv~e~ 437 (672)
...+|+|.||.|-.+..+ .+..||||+++.... ..+...-|+++++++. .| -+|.+.+++...++.++|+|.
T Consensus 94 ~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfel 172 (415)
T KOG0671|consen 94 VDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFEL 172 (415)
T ss_pred hhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEec
Confidence 456999999999999954 478999999986543 3455677999999993 22 378889999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-----------------
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK----------------- 500 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~----------------- 500 (672)
+ |-+++++|..+. -.+++..++..|+.|++++++||| +.+++|-||||+|||+..
T Consensus 173 l-G~S~~dFlk~N~---y~~fpi~~ir~m~~QL~~sv~fLh----~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r 244 (415)
T KOG0671|consen 173 L-GLSTFDFLKENN---YIPFPIDHIRHMGYQLLESVAFLH----DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIR 244 (415)
T ss_pred c-ChhHHHHhccCC---ccccchHHHHHHHHHHHHHHHHHH----hcceeecCCChheEEEeccceEEEeccCCccceec
Confidence 8 669999998764 367999999999999999999999 899999999999999832
Q ss_pred ---CCcEEEeccCCCccCCCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCC---C
Q 005880 501 ---TGNARVSDFGLSIFAPPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGM---G 572 (672)
Q Consensus 501 ---~~~~kl~DfG~a~~~~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~---~ 572 (672)
+..+|++|||.|+..... ..+.|..|+|||++. +-.++..+||||+||||+|++||..-|....+.+.+ +
T Consensus 245 ~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViL--gLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMe 322 (415)
T KOG0671|consen 245 PLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVIL--GLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMME 322 (415)
T ss_pred cCCCcceEEEecCCcceeccCcceeeeccccCCchhee--ccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHH
Confidence 123899999999876554 567799999999887 567899999999999999999999999876644322 1
Q ss_pred CCCCCChhH-HHHHHHhhh-ccccccc---------------hhh---ccccChHHHHHHHHHHHHhccCCCCCCCCCHH
Q 005880 573 CGGAVDLPR-WVQSVVREE-WTAEVFD---------------LEL---MRYKDIEEEMVGLLQVAMACTSASPDQRPNMS 632 (672)
Q Consensus 573 ~~~~~~~~~-~~~~~~~~~-~~~~~~d---------------~~~---~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 632 (672)
-..+ .++. .+.....++ +...-+| +.. ......+.+...|++|+.+||..||.+|+|+.
T Consensus 323 rIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~ 401 (415)
T KOG0671|consen 323 RILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLR 401 (415)
T ss_pred HhhC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHH
Confidence 1111 1111 111110000 0000111 000 00112245667899999999999999999999
Q ss_pred HHHH
Q 005880 633 HVVK 636 (672)
Q Consensus 633 evl~ 636 (672)
|++.
T Consensus 402 EAL~ 405 (415)
T KOG0671|consen 402 EALS 405 (415)
T ss_pred HHhc
Confidence 9974
No 379
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=7.8e-32 Score=289.95 Aligned_cols=243 Identities=25% Similarity=0.370 Sum_probs=198.6
Q ss_pred hcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEc-----CCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFA-----REEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~-----~~~~~lv~e~ 437 (672)
.+.||+|.+|.||+++ .++|+.+|+|++..... ..++.+.|.++++.+ .|||++.++|++.. +++.||||||
T Consensus 24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEf 102 (953)
T KOG0587|consen 24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEF 102 (953)
T ss_pred EEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeec
Confidence 4679999999999999 66899999998865433 567778889999888 69999999999873 5689999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
|.+|+..|++++.. ...+.|..+..|++.+++||.||| ++.++|||||-.|||++.++.+||+|||.+.....
T Consensus 103 C~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH----~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQlds 175 (953)
T KOG0587|consen 103 CGGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLH----NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDS 175 (953)
T ss_pred cCCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHh----hcceeeecccCceEEEeccCcEEEeeeeeeeeeec
Confidence 99999999998766 356999999999999999999999 88999999999999999999999999999976654
Q ss_pred -----CCCCCCCcccCCCccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 518 -----STVPRSNGYRAPELSSSD---GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 518 -----~~~~~t~~y~aPE~l~~~---~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
.+..||+.|||||++... ...|+..+|+||+|++..||.-|.+|+.+.-+ ...+-.+.+.
T Consensus 176 T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP------------mraLF~IpRN 243 (953)
T KOG0587|consen 176 TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP------------MRALFLIPRN 243 (953)
T ss_pred ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch------------hhhhccCCCC
Confidence 377889999999987643 45677899999999999999999999864321 1111111111
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
--+.+ ........++.++|..||.+|-++||++.++++
T Consensus 244 ------PPPkL---krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 244 ------PPPKL---KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ------CCccc---cchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 11122 223456678999999999999999999988764
No 380
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=300.83 Aligned_cols=243 Identities=24% Similarity=0.326 Sum_probs=195.1
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.+.++||+|+||.|..++.+ +++.||+|++.+.. ..+..-|..|-.+|..-+.+-|+.++-.|.++.+.|+|||||
T Consensus 78 eilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~ 157 (1317)
T KOG0612|consen 78 EILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYM 157 (1317)
T ss_pred HHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecc
Confidence 45688999999999999954 68999999998733 235667999999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
+||+|-.++.... ++++....-++..|+-||.-|| +.|+|||||||+|||+|..|++||+|||.+..+..+
T Consensus 158 pGGDlltLlSk~~-----~~pE~~ArFY~aEiVlAldslH----~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 158 PGGDLLTLLSKFD-----RLPEDWARFYTAEIVLALDSLH----SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred cCchHHHHHhhcC-----CChHHHHHHHHHHHHHHHHHHH----hccceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 9999999997653 4888888999999999999999 899999999999999999999999999998766643
Q ss_pred ------CCCCCCcccCCCccccC--C-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 519 ------TVPRSNGYRAPELSSSD--G-RKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 ------~~~~t~~y~aPE~l~~~--~-~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
..+||+.|++||++... + +.|++.+|.||+||++|||+.|.-||+.+ .+++-+..+.+-
T Consensus 229 G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad------------slveTY~KIm~h 296 (1317)
T KOG0612|consen 229 GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD------------SLVETYGKIMNH 296 (1317)
T ss_pred CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH------------HHHHHHHHHhch
Confidence 56799999999998653 3 67999999999999999999999999744 344445555444
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCC---HHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPN---MSHVV 635 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt---~~evl 635 (672)
.....+.+ ...+.++ ..+||.+.+ -+|+.|.. +.++-
T Consensus 297 k~~l~FP~-----~~~VSee---akdLI~~ll-~~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 297 KESLSFPD-----ETDVSEE---AKDLIEALL-CDREVRLGRNGIEDIK 336 (1317)
T ss_pred hhhcCCCc-----ccccCHH---HHHHHHHHh-cChhhhcccccHHHHH
Confidence 22211111 1123333 444454544 47888887 66654
No 381
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.8e-32 Score=285.11 Aligned_cols=231 Identities=22% Similarity=0.280 Sum_probs=183.1
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
...+|.|+|+.|-++.. .+++..+||++.+. ..+..+|+.++... +||||+++.+.+.+..+.|+|||++.+|-
T Consensus 327 ~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~e 402 (612)
T KOG0603|consen 327 REELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGE 402 (612)
T ss_pred ccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccH
Confidence 45699999999999994 46889999999765 23445677666665 69999999999999999999999999998
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe-CCCCcEEEeccCCCccCCCC--C
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL-DKTGNARVSDFGLSIFAPPS--T 519 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll-~~~~~~kl~DfG~a~~~~~~--~ 519 (672)
+.+.+...+ .....+..|+.+|+.|+.||| +.+||||||||+|||+ +..++++|+|||.++..... +
T Consensus 403 ll~ri~~~~------~~~~e~~~w~~~lv~Av~~LH----~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~t 472 (612)
T KOG0603|consen 403 LLRRIRSKP------EFCSEASQWAAELVSAVDYLH----EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDT 472 (612)
T ss_pred HHHHHHhcc------hhHHHHHHHHHHHHHHHHHHH----hcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcc
Confidence 877776543 233777889999999999999 7899999999999999 58999999999999988776 4
Q ss_pred CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchh
Q 005880 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLE 599 (672)
Q Consensus 520 ~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (672)
..-|..|.|||++. ...+++++|+||||++||+|++|+.||.....+ .+....+ ......
T Consensus 473 p~~t~~y~APEvl~--~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-----------~ei~~~i-~~~~~s------ 532 (612)
T KOG0603|consen 473 PALTLQYVAPEVLA--IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-----------IEIHTRI-QMPKFS------ 532 (612)
T ss_pred cchhhcccChhhhc--cCCCCcchhhHHHHHHHHHHHhCCCccccCCch-----------HHHHHhh-cCCccc------
Confidence 45578899999775 678999999999999999999999999754322 1111111 111000
Q ss_pred hccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 600 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..+.+ ...+|+.+||+.||.+||+|.|+..
T Consensus 533 ----~~vS~---~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 533 ----ECVSD---EAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ----cccCH---HHHHHHHHhccCChhhCcChhhhcc
Confidence 12233 3455666999999999999999863
No 382
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=277.66 Aligned_cols=239 Identities=22% Similarity=0.351 Sum_probs=188.2
Q ss_pred hcccCcCCeEEEEEEE-EcCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|.||+||-|+ .++|+.||||++.+.. ...+.++++|+.||++++||.||.+...|+..+..++|||.+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 4789999999999999 5589999999997543 335678999999999999999999999999999999999999554
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC---CcEEEeccCCCccCCCC
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT---GNARVSDFGLSIFAPPS 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~---~~~kl~DfG~a~~~~~~ 518 (672)
-|..+|.... .++++..-.-++.||+.||.||| ..+|+|+||||+|||+... -++||||||+|+.+...
T Consensus 649 MLEMILSsEk----gRL~er~TkFlvtQIL~ALr~LH----~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk 720 (888)
T KOG4236|consen 649 MLEMILSSEK----GRLPERITKFLVTQILVALRYLH----FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK 720 (888)
T ss_pred HHHHHHHhhc----ccchHHHHHHHHHHHHHHHHHhh----hcceeeccCCchheeeccCCCCCceeeccccceeecchh
Confidence 4555555433 45888888889999999999999 7899999999999999643 47999999999998875
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
..+||+.|.|||++.. ..|...-|+||.|||+|--++|..||..+. ++.+.++ ...++
T Consensus 721 sFRrsVVGTPAYLaPEVLrn--kGyNrSLDMWSVGVIiYVsLSGTFPFNEdE-----------dIndQIQ---NAaFM-- 782 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRN--KGYNRSLDMWSVGVIIYVSLSGTFPFNEDE-----------DINDQIQ---NAAFM-- 782 (888)
T ss_pred hhhhhhcCCccccCHHHHhh--ccccccccceeeeEEEEEEecccccCCCcc-----------chhHHhh---ccccc--
Confidence 6789999999999864 467788999999999999999999997542 2222211 11110
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVV 635 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 635 (672)
+- .....+...+.+++|...|+..-++|-+.++-+
T Consensus 783 -yP-----p~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 783 -YP-----PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred -cC-----CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 11 111223334556777788888888888876543
No 383
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.5e-32 Score=268.94 Aligned_cols=248 Identities=22% Similarity=0.318 Sum_probs=189.5
Q ss_pred HHhcccCcCCeEEEEEEE-EcCCcEEEEEEcc--cC-Ccc----hHHHHHHHHHHHcCCCCCceeeeEEEEE-cCCeEEE
Q 005880 363 ASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLK--DA-SIG----GKREFEQHMEVLGRLRHPNLVGLKAYYF-AREEKLL 433 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~--~~-~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~l 433 (672)
-..++||+|+|+.||+|. +...+.||||+-. +. ..+ ..+...+|.+|-+.|+||.||++++|+. +.+..+-
T Consensus 466 LlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCT 545 (775)
T KOG1151|consen 466 LLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCT 545 (775)
T ss_pred HHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccccee
Confidence 345789999999999999 5567899999854 21 111 1234578999999999999999999996 4556789
Q ss_pred EEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC---CCCcEEEeccC
Q 005880 434 VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD---KTGNARVSDFG 510 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~---~~~~~kl~DfG 510 (672)
|+|||+|.+|+-+|+.++ .+++.+...|+.||+.||.||.+- +.+|||-||||.|||+- ..|.+||.|||
T Consensus 546 VLEYceGNDLDFYLKQhk-----lmSEKEARSIiMQiVnAL~YLNEi--kpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 546 VLEYCEGNDLDFYLKQHK-----LMSEKEARSIIMQIVNALKYLNEI--KPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred eeeecCCCchhHHHHhhh-----hhhHHHHHHHHHHHHHHHHHHhcc--CCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 999999999999998764 489999999999999999999865 68999999999999984 45789999999
Q ss_pred CCccCCCC------------CCCCCCcccCCCccccC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC
Q 005880 511 LSIFAPPS------------TVPRSNGYRAPELSSSD--GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGA 576 (672)
Q Consensus 511 ~a~~~~~~------------~~~~t~~y~aPE~l~~~--~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~ 576 (672)
+++.++.. ...||..|.+||.+... ....+.|+||||.|||+|..+.|+.||..+...
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ-------- 690 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ-------- 690 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH--------
Confidence 99887653 34568899999987654 456788999999999999999999999654221
Q ss_pred CChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 005880 577 VDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVV 635 (672)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 635 (672)
+.++.+..+...-.-.....+.+.. +...+|++||++.-++|.+..++.
T Consensus 691 -------QdILqeNTIlkAtEVqFP~KPvVss---eAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 691 -------QDILQENTILKATEVQFPPKPVVSS---EAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred -------HHHHhhhchhcceeccCCCCCccCH---HHHHHHHHHHHhhhhhhhhHHHHc
Confidence 2233332221111111111122233 344567799999999998887765
No 384
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=1.2e-30 Score=260.85 Aligned_cols=234 Identities=28% Similarity=0.407 Sum_probs=189.0
Q ss_pred CeEEEEEEEEc-CCcEEEEEEcccCCcch-HHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChhHHhhc
Q 005880 372 GFGTAYKAVLD-DGSVVAVKRLKDASIGG-KREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHG 449 (672)
Q Consensus 372 ~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 449 (672)
+||.||+|... +|+.+|+|++....... .+.+.+|++.+++++|+||+++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 48999999998655444 68899999999999999999999999999999999999999999999875
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----CCCCCCc
Q 005880 450 NRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----TVPRSNG 525 (672)
Q Consensus 450 ~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----~~~~t~~ 525 (672)
.. .+++..++.++.++++++.||| +.+++|+||+|+||++++++.++|+|||.+...... ...++..
T Consensus 81 ~~-----~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 151 (244)
T smart00220 81 RG-----RLSEDEARFYARQILSALEYLH----SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPE 151 (244)
T ss_pred cc-----CCCHHHHHHHHHHHHHHHHHHH----HcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcC
Confidence 43 2889999999999999999999 789999999999999999999999999999876553 4556778
Q ss_pred ccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccC
Q 005880 526 YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKD 605 (672)
Q Consensus 526 y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (672)
|++||.+. +..++.++||||||+++|+|++|..||.... +............... ...
T Consensus 152 ~~~pE~~~--~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-----------~~~~~~~~~~~~~~~~---------~~~ 209 (244)
T smart00220 152 YMAPEVLL--GKGYGKAVDVWSLGVILYELLTGKPPFPGDD-----------QLLELFKKIGKPKPPF---------PPP 209 (244)
T ss_pred CCCHHHHc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----------cHHHHHHHHhccCCCC---------ccc
Confidence 99999654 5677889999999999999999999986421 1111221111111000 000
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 606 IEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 606 ~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.......+.+++.+|+..+|++||++.++++
T Consensus 210 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 210 EWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred cccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 0003346888999999999999999999986
No 385
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=4.6e-31 Score=238.99 Aligned_cols=206 Identities=25% Similarity=0.382 Sum_probs=167.8
Q ss_pred ccCHHHHHHHHhcccCcCCeEEEEEEE-EcCCcEEEEEEcccC-CcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCe
Q 005880 354 RFELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDA-SIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREE 430 (672)
Q Consensus 354 ~~~~~~l~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 430 (672)
.|++.+-.......||+|++|.|-+-+ ..+|+..|||+++.. ..+..++..+|+.+..+- .+|.+|.++|.+.....
T Consensus 40 ~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 40 NFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred ccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 366655444566789999999998888 457999999999753 334566778888876554 79999999999999999
Q ss_pred EEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 431 KLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 431 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
.++.||.| ..+|+.+-..--. ....+++..+=+|+..+.+||.|||+ +..+||||+||+|||++.+|++|+||||
T Consensus 120 vwIcME~M-~tSldkfy~~v~~-~g~~ipE~vlGkIa~Svv~al~~L~~---kL~vIHRDvKPsNiLIn~~GqVKiCDFG 194 (282)
T KOG0984|consen 120 VWICMELM-DTSLDKFYRKVLK-KGGTIPEDVLGKIAVSVVHALEFLHS---KLSVIHRDVKPSNILINYDGQVKICDFG 194 (282)
T ss_pred EEEeHHHh-hhhHHHHHHHHHh-cCCcCchHHhhHhHHHHHHHHHHHHH---HhhhhhccCCcceEEEccCCcEEEcccc
Confidence 99999999 4477665432211 22458899999999999999999995 5789999999999999999999999999
Q ss_pred CCccCCCC----CCCCCCcccCCCccccC--CCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 511 LSIFAPPS----TVPRSNGYRAPELSSSD--GRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 511 ~a~~~~~~----~~~~t~~y~aPE~l~~~--~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
++-.+..+ ...|-..|+|||.+... ...|+.|+||||+|+.+.||.+++.||..
T Consensus 195 IsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 195 ISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred cceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 99777655 24566789999977543 33688999999999999999999999964
No 386
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=6.7e-32 Score=289.15 Aligned_cols=237 Identities=25% Similarity=0.357 Sum_probs=180.8
Q ss_pred hcccCcCCeE-EEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFG-TAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g-~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+++|.|+.| .||+|.++ |+.||||++-.. .....++|+..|+.- +|||||++++.-.++.+.||..|.| ..+
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~~s 588 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYE-GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-ACS 588 (903)
T ss_pred HHHcccCCCCcEEEEEeeC-CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-hhh
Confidence 4679999987 68999997 889999998533 334668999999887 5999999999999999999999999 559
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC---C--CcEEEeccCCCccCCC
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK---T--GNARVSDFGLSIFAPP 517 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~---~--~~~kl~DfG~a~~~~~ 517 (672)
|.+++.... .......-...+.+..|+++||+||| +.+||||||||.||||+. + .+++|+|||+++....
T Consensus 589 L~dlie~~~-~d~~~~~~i~~~~~l~q~~~GlaHLH----sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 589 LQDLIESSG-LDVEMQSDIDPISVLSQIASGLAHLH----SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred HHHHHhccc-cchhhcccccHHHHHHHHHHHHHHHH----hcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 999998741 11111111455788999999999999 899999999999999975 3 4799999999987765
Q ss_pred C--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 518 S--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTG-KCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 518 ~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
+ ...||.||+|||++... ..+.++||||+|||+|+.++| .+||...-..+ ..++.
T Consensus 664 ~~sS~~r~s~~sGt~GW~APE~L~~~--~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--------------~NIl~ 727 (903)
T KOG1027|consen 664 GKSSFSRLSGGSGTSGWQAPEQLRED--RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--------------ANILT 727 (903)
T ss_pred CcchhhcccCCCCcccccCHHHHhcc--ccCcccchhhcCceEEEEecCCccCCCchHHhh--------------hhhhc
Confidence 3 56689999999987643 456699999999999999996 99996532211 11222
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
...... ......++ +-.+||.+|+++||..||++.+|+.
T Consensus 728 ~~~~L~-------~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 728 GNYTLV-------HLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred Ccccee-------eeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 211111 11111122 5567888999999999999999973
No 387
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.8e-30 Score=280.94 Aligned_cols=258 Identities=19% Similarity=0.273 Sum_probs=173.1
Q ss_pred HhcccCcCCeEEEEEEEE-----------------cCCcEEEEEEcccCCcchHHHH--------------HHHHHHHcC
Q 005880 364 SAEMLGKGGFGTAYKAVL-----------------DDGSVVAVKRLKDASIGGKREF--------------EQHMEVLGR 412 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-----------------~~g~~vavK~~~~~~~~~~~~~--------------~~e~~~l~~ 412 (672)
..++||+|+||.||+|.. .+++.||||+++.......++| ..|+.++.+
T Consensus 149 i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~ 228 (507)
T PLN03224 149 LRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAK 228 (507)
T ss_pred EeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHH
Confidence 357899999999999964 2356899999875433222333 346677777
Q ss_pred CCCCce-----eeeEEEEEc--------CCeEEEEEeecCCCChhHHhhcCCCC-------------------CCCCCCH
Q 005880 413 LRHPNL-----VGLKAYYFA--------REEKLLVSEYMPNGSLFWLLHGNRGP-------------------GRTPLDW 460 (672)
Q Consensus 413 l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~~l~~ 460 (672)
++|.++ ++++++|.. .+..++||||+++|+|.++++..... ....++|
T Consensus 229 l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~ 308 (507)
T PLN03224 229 IKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDI 308 (507)
T ss_pred hhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCH
Confidence 766654 677787753 35679999999999999999753210 1123578
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC------CCCCCCcccCCCcccc
Q 005880 461 TTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS------TVPRSNGYRAPELSSS 534 (672)
Q Consensus 461 ~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~------~~~~t~~y~aPE~l~~ 534 (672)
..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++..... ....++.|+|||.+..
T Consensus 309 ~~~~~i~~ql~~aL~~lH----~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~ 384 (507)
T PLN03224 309 NVIKGVMRQVLTGLRKLH----RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVM 384 (507)
T ss_pred HHHHHHHHHHHHHHHHHH----HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcC
Confidence 889999999999999999 789999999999999999999999999999765432 1223678999997643
Q ss_pred CCC--------------------CCCchhHHHHHHHHHHHHHhCCC-CCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 535 DGR--------------------KQSQKSDVYSFGVLLLELLTGKC-PSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 535 ~~~--------------------~~~~~~DV~S~Gvvl~el~tg~~-P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
... ....+.||||+||++|||++|.. ||...............++..|.. ...
T Consensus 385 ~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~--~~~---- 458 (507)
T PLN03224 385 PQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM--YKG---- 458 (507)
T ss_pred CCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh--hcc----
Confidence 211 11235799999999999999875 654211000000000111122211 000
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCC---CCCCCHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASP---DQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP---~~RPt~~evl~ 636 (672)
...+. ...........+++.+++..+| .+|+|++|+++
T Consensus 459 ~~~~~-----~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 459 QKYDF-----SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cCCCc-----ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 01111 1111223356677778998766 78999999973
No 388
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=2.1e-30 Score=287.88 Aligned_cols=259 Identities=17% Similarity=0.169 Sum_probs=162.6
Q ss_pred HhcccCcCCeEEEEEEEEc-C----CcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEE------EEcCCeEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-D----GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY------YFAREEKL 432 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~----g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------~~~~~~~~ 432 (672)
..+.||+|+||.||+|+.. + +..||||++..... .+....| .+....+.+++.++.. ...+.+.+
T Consensus 136 l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (566)
T PLN03225 136 LGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDEYW 211 (566)
T ss_pred EeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccccCCceE
Confidence 3578999999999999965 4 68999999864332 1111111 1122222222222211 23556789
Q ss_pred EEEeecCCCChhHHhhcCCCC---------------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEE
Q 005880 433 LVSEYMPNGSLFWLLHGNRGP---------------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVL 497 (672)
Q Consensus 433 lv~e~~~~g~L~~~l~~~~~~---------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIl 497 (672)
+||||+++++|.+++...... .........+..++.|+++||+||| +.+|+||||||+|||
T Consensus 212 LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH----~~gIiHRDLKP~NIL 287 (566)
T PLN03225 212 LVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH----STGIVHRDVKPQNII 287 (566)
T ss_pred EEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH----HCCEEeCcCCHHHEE
Confidence 999999999999998754210 0011223456689999999999999 789999999999999
Q ss_pred eCC-CCcEEEeccCCCccCCC------CCCCCCCcccCCCccccCCC--------------------CCCchhHHHHHHH
Q 005880 498 LDK-TGNARVSDFGLSIFAPP------STVPRSNGYRAPELSSSDGR--------------------KQSQKSDVYSFGV 550 (672)
Q Consensus 498 l~~-~~~~kl~DfG~a~~~~~------~~~~~t~~y~aPE~l~~~~~--------------------~~~~~~DV~S~Gv 550 (672)
+++ ++.+||+|||+++.... ....++++|+|||.+..... .++.++|||||||
T Consensus 288 l~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGv 367 (566)
T PLN03225 288 FSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGL 367 (566)
T ss_pred EeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHH
Confidence 986 58999999999976532 24567889999996532211 2345679999999
Q ss_pred HHHHHHhCCCCCCCCCCCC-CCCCCCCCChhHHHHHHHhhhccccccchhhc-cccChHHHHHHHHHHHHhccCCCCCCC
Q 005880 551 LLLELLTGKCPSVIDGGGA-GMGCGGAVDLPRWVQSVVREEWTAEVFDLELM-RYKDIEEEMVGLLQVAMACTSASPDQR 628 (672)
Q Consensus 551 vl~el~tg~~P~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~l~~li~~Cl~~dP~~R 628 (672)
++|||+++..++....... ........+...|....... ..+... .....+.......+|+.+||+.||++|
T Consensus 368 iL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR 441 (566)
T PLN03225 368 IFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR------ASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQR 441 (566)
T ss_pred HHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc------cchhhhhhhhhccccchHHHHHHHHHccCCcccC
Confidence 9999999776653210000 00000011222332211110 000000 000001112234578899999999999
Q ss_pred CCHHHHHH
Q 005880 629 PNMSHVVK 636 (672)
Q Consensus 629 Pt~~evl~ 636 (672)
||+.|+++
T Consensus 442 ~ta~e~L~ 449 (566)
T PLN03225 442 ISAKAALA 449 (566)
T ss_pred CCHHHHhC
Confidence 99999985
No 389
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.5e-31 Score=260.35 Aligned_cols=232 Identities=25% Similarity=0.355 Sum_probs=182.2
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchH---HHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGK---REFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~---~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
+..+||+|+||.|.+|..+ +.+.+|||++++..+-.. +--..|-++|+-. +-|.+++++.++..-+..|.||||+
T Consensus 353 Fl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyv 432 (683)
T KOG0696|consen 353 FLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYV 432 (683)
T ss_pred eEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEe
Confidence 4578999999999999965 467899999987543222 2224566666655 5788999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC--
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP-- 516 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~-- 516 (672)
.||+|...++.-. .+.+....-+|..||-||-+|| +.+||.||||.+||++|.+|++||+|||+++.--
T Consensus 433 nGGDLMyhiQQ~G-----kFKEp~AvFYAaEiaigLFFLh----~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~ 503 (683)
T KOG0696|consen 433 NGGDLMYHIQQVG-----KFKEPVAVFYAAEIAIGLFFLH----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD 503 (683)
T ss_pred cCchhhhHHHHhc-----ccCCchhhhhhHHHHHHhhhhh----cCCeeeeeccccceEeccCCceEeeecccccccccC
Confidence 9999988887543 3777888899999999999999 8999999999999999999999999999997432
Q ss_pred ---CCCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 517 ---PSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 517 ---~~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
..+..||+.|+|||++.. ..|+..+|.|||||+||||+.|++||+++++. +.++++....
T Consensus 504 ~~TTkTFCGTPdYiAPEIi~Y--qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~------------elF~aI~ehn--- 566 (683)
T KOG0696|consen 504 GVTTKTFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED------------ELFQAIMEHN--- 566 (683)
T ss_pred CcceeeecCCCcccccceEEe--cccccchhHHHHHHHHHHHHcCCCCCCCCCHH------------HHHHHHHHcc---
Confidence 236789999999998763 58999999999999999999999999865432 2333333222
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCC
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPN 630 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 630 (672)
..-++... .+...+....+.+.|.+|..
T Consensus 567 ------vsyPKslS---kEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 567 ------VSYPKSLS---KEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred ------CcCccccc---HHHHHHHHHHhhcCCccccC
Confidence 11222222 33455666888899999853
No 390
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2e-30 Score=262.63 Aligned_cols=241 Identities=22% Similarity=0.275 Sum_probs=192.1
Q ss_pred cCHHHHHHHHhcccCcCCeEEEEEEEEcCCc-EEEEEEcccCCcch---HHHHHHHHHHHcCCCCCceeeeEEEEEcCCe
Q 005880 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGS-VVAVKRLKDASIGG---KREFEQHMEVLGRLRHPNLVGLKAYYFAREE 430 (672)
Q Consensus 355 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~g~-~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 430 (672)
..++|+ .....||-|+||.|-++..++.. .+|+|++++..+.+ .+.+..|-.+|...+.|.||++|-.|.+++.
T Consensus 417 v~l~dl--~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~ky 494 (732)
T KOG0614|consen 417 VKLSDL--KRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKY 494 (732)
T ss_pred cchhhh--hhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchh
Confidence 344444 23456999999999999976433 48999998755443 3446678899999999999999999999999
Q ss_pred EEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 431 KLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 431 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
.|++||-|-||.|...|+.. ..++..+..-++..+.+|++||| +++||.|||||+|.++|.+|-+||.|||
T Consensus 495 vYmLmEaClGGElWTiLrdR-----g~Fdd~tarF~~acv~EAfeYLH----~k~iIYRDLKPENllLd~~Gy~KLVDFG 565 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDR-----GSFDDYTARFYVACVLEAFEYLH----RKGIIYRDLKPENLLLDNRGYLKLVDFG 565 (732)
T ss_pred hhhhHHhhcCchhhhhhhhc-----CCcccchhhhhHHHHHHHHHHHH----hcCceeccCChhheeeccCCceEEeehh
Confidence 99999999999999999754 35888888899999999999999 8999999999999999999999999999
Q ss_pred CCccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 511 LSIFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 511 ~a~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
+|+.+... +.+||+.|.|||++... ..+.++|.||+|+++|||++|++||... +...-...+
T Consensus 566 FAKki~~g~KTwTFcGTpEYVAPEIILnK--GHD~avDyWaLGIli~ELL~G~pPFs~~------------dpmktYn~I 631 (732)
T KOG0614|consen 566 FAKKIGSGRKTWTFCGTPEYVAPEIILNK--GHDRAVDYWALGILIYELLTGSPPFSGV------------DPMKTYNLI 631 (732)
T ss_pred hHHHhccCCceeeecCCcccccchhhhcc--CcchhhHHHHHHHHHHHHHcCCCCCCCC------------chHHHHHHH
Confidence 99988765 67899999999988744 5677899999999999999999999743 333334444
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCC
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPN 630 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 630 (672)
++.-...++ +. .....-.+++++..+.+|.+|..
T Consensus 632 LkGid~i~~-------Pr---~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 632 LKGIDKIEF-------PR---RITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred Hhhhhhhhc-------cc---ccchhHHHHHHHHHhcCcHhhhc
Confidence 433211111 01 12233456777888899999986
No 391
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1.9e-29 Score=231.74 Aligned_cols=186 Identities=23% Similarity=0.382 Sum_probs=159.6
Q ss_pred HHhcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCC-CCceeeeEEEEEcCC--eEEEEEeec
Q 005880 363 ASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR-HPNLVGLKAYYFARE--EKLLVSEYM 438 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~~lv~e~~ 438 (672)
++.+++|+|.++.||.|. ..+.+.++||+++.. ..+.+.+|+++|+.|+ ||||+++++...++. ...||+||+
T Consensus 41 eivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v 117 (338)
T KOG0668|consen 41 EIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYV 117 (338)
T ss_pred HHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhh
Confidence 456889999999999999 567889999999865 4578899999999997 999999999998765 456999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC-CcEEEeccCCCccCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT-GNARVSDFGLSIFAPP 517 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~-~~~kl~DfG~a~~~~~ 517 (672)
.+.+...+- +.++...+..++.++++||.|.| +.||+|||+||.|++||.. -..+|+|+|+|.+..+
T Consensus 118 ~n~Dfk~ly--------~tl~d~dIryY~~elLkALdyCH----S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 118 NNTDFKQLY--------PTLTDYDIRYYIYELLKALDYCH----SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred ccccHHHHh--------hhhchhhHHHHHHHHHHHHhHHH----hcCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 998776654 24777888999999999999999 8999999999999999965 4699999999988877
Q ss_pred CC----CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 518 ST----VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 518 ~~----~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
.. .+.+..|.-||++.. -..|+..-|+|||||++..|+..+.||..
T Consensus 186 ~~eYnVRVASRyfKGPELLVd-y~~YDYSLD~WS~GcmlA~miFrkepFFh 235 (338)
T KOG0668|consen 186 GKEYNVRVASRYFKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFH 235 (338)
T ss_pred CceeeeeeehhhcCCchheee-chhccccHHHHHHHHHHHHHHhccCcccC
Confidence 62 334667889998753 46788899999999999999999999864
No 392
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-30 Score=244.36 Aligned_cols=190 Identities=24% Similarity=0.393 Sum_probs=161.3
Q ss_pred cccCcCCeEEEEEEEE-cCCcEEEEEEcccC--CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC-----eEEEEEee
Q 005880 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDA--SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE-----EKLLVSEY 437 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~ 437 (672)
..||-|+||.||.++. ++|+.||+|++... +....+.+-+|+++|.-.+|.|++..++...-.. +.|+|+|.
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL 138 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL 138 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 4699999999999984 57999999998753 3335678889999999999999999988875432 56789999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
| ..+|..++-.. .+++...+.-+.+||++||.||| +.+|.||||||.|.|++.+...||||||+++..+.
T Consensus 139 m-QSDLHKIIVSP-----Q~Ls~DHvKVFlYQILRGLKYLH----sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 139 M-QSDLHKIIVSP-----QALTPDHVKVFVYQILRGLKYLH----TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred H-HhhhhheeccC-----CCCCcchhhhhHHHHHhhhHHHh----hcchhhccCCCccEEeccCceEEecccccccccch
Confidence 8 45888877533 56888999999999999999999 88999999999999999999999999999997765
Q ss_pred CC------CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 005880 518 ST------VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDG 566 (672)
Q Consensus 518 ~~------~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~ 566 (672)
.. .+.|..|+|||++++ .+.|+.+.||||.|||+.||+..+.-|...+
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMG-aRhYs~AvDiWSVGCIFaELLgRrILFQAq~ 262 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMG-ARRYTGAVDIWSVGCIFAELLQRKILFQAAG 262 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhc-chhhcCccceehhhHHHHHHHhhhhhhhccC
Confidence 42 233667999999874 5789999999999999999999999987544
No 393
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=1.2e-27 Score=233.23 Aligned_cols=206 Identities=34% Similarity=0.535 Sum_probs=179.1
Q ss_pred cCcCCeEEEEEEEEcC-CcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChhH
Q 005880 368 LGKGGFGTAYKAVLDD-GSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFW 445 (672)
Q Consensus 368 lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 445 (672)
||+|.+|.||++...+ |+.+++|++...... ..+.+.+|++.++.++|++|+++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999764 899999999865432 35789999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-CCcEEEeccCCCccCCCC-----C
Q 005880 446 LLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK-TGNARVSDFGLSIFAPPS-----T 519 (672)
Q Consensus 446 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~-~~~~kl~DfG~a~~~~~~-----~ 519 (672)
++.... ..+++..+..++.+++++++||| +.+++|+||+|.||+++. ++.++|+|||.+...... .
T Consensus 81 ~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh----~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 152 (215)
T cd00180 81 LLKENE----GKLSEDEILRILLQILEGLEYLH----SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT 152 (215)
T ss_pred HHHhcc----CCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhc
Confidence 997542 35899999999999999999999 789999999999999999 899999999999766543 2
Q ss_pred CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchh
Q 005880 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLE 599 (672)
Q Consensus 520 ~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (672)
..+...|++||.+... ...+.++|+|++|+++++|
T Consensus 153 ~~~~~~~~~pe~~~~~-~~~~~~~D~~~lg~~~~~l-------------------------------------------- 187 (215)
T cd00180 153 IVGTPAYMAPEVLLGK-GYYSEKSDIWSLGVILYEL-------------------------------------------- 187 (215)
T ss_pred ccCCCCccChhHhccc-CCCCchhhhHHHHHHHHHH--------------------------------------------
Confidence 4456789999965422 3778899999999999998
Q ss_pred hccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 600 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
..+.+++..|++.+|++||++.++++.
T Consensus 188 -----------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 -----------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred -----------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 246778889999999999999999864
No 394
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=6.4e-29 Score=257.35 Aligned_cols=193 Identities=24% Similarity=0.404 Sum_probs=164.8
Q ss_pred cccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcchH---HHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGK---REFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.||-|+||+|.+++ .++...+|+|.+++.+.-.+ ..++.|-.||...+.+-||+++..|.+.+..|+||||++||
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGG 714 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG 714 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCc
Confidence 579999999999998 55577899999987654333 34577889999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC-----
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP----- 516 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~----- 516 (672)
++..+|.+.. -+.+....-++..+.-|+++.| +.|+|||||||+|||||.||++||.|||++.-+.
T Consensus 715 DmMSLLIrmg-----IFeE~LARFYIAEltcAiesVH----kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 715 DMMSLLIRMG-----IFEEDLARFYIAELTCAIESVH----KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred cHHHHHHHhc-----cCHHHHHHHHHHHHHHHHHHHH----hccceecccCccceEEccCCceeeeeccccccceecccc
Confidence 9999987654 3777777888889999999999 8999999999999999999999999999984221
Q ss_pred ----C--------------------------------------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHH
Q 005880 517 ----P--------------------------------------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLE 554 (672)
Q Consensus 517 ----~--------------------------------------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~e 554 (672)
. ...+||..|+|||++.. ..++..+|.||.||||||
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r--~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR--TGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc--cCccccchhhHhhHHHHH
Confidence 0 02346778999998863 468889999999999999
Q ss_pred HHhCCCCCCCCCCCC
Q 005880 555 LLTGKCPSVIDGGGA 569 (672)
Q Consensus 555 l~tg~~P~~~~~~~~ 569 (672)
|+.|++||..+...+
T Consensus 864 m~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGE 878 (1034)
T ss_pred HhhCCCCccCCCCCc
Confidence 999999998776543
No 395
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.5e-28 Score=245.29 Aligned_cols=127 Identities=24% Similarity=0.279 Sum_probs=106.4
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCC-----C---CceeeeEEEEEc----CCe
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR-----H---PNLVGLKAYYFA----REE 430 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~~----~~~ 430 (672)
...+||.|.|++||++.. .+.+.||+|+.+.+.. ..+....||++|++++ | .+||+++++|.. +.+
T Consensus 82 v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh-YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~H 160 (590)
T KOG1290|consen 82 VQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH-YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQH 160 (590)
T ss_pred EEEeccccccceeEEEeeccCCeEEEEEEEehhhH-HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcE
Confidence 357899999999999994 4578999999985543 4566788999998883 3 479999999974 458
Q ss_pred EEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe
Q 005880 431 KLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL 498 (672)
Q Consensus 431 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll 498 (672)
.++|+|++ |.+|..++....- +-++...+.+|++||+.||.|||.. .+|||-||||+|||+
T Consensus 161 VCMVfEvL-GdnLLklI~~s~Y---rGlpl~~VK~I~~qvL~GLdYLH~e---cgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 161 VCMVFEVL-GDNLLKLIKYSNY---RGLPLSCVKEICRQVLTGLDYLHRE---CGIIHTDLKPENVLL 221 (590)
T ss_pred EEEEehhh-hhHHHHHHHHhCC---CCCcHHHHHHHHHHHHHHHHHHHHh---cCccccCCCcceeee
Confidence 89999999 7788888876542 4488999999999999999999975 479999999999998
No 396
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=5.4e-28 Score=233.35 Aligned_cols=239 Identities=23% Similarity=0.367 Sum_probs=185.3
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcc---hHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIG---GKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
..+||+|+|+.|..+++ ++.+.+|+|++++.-.. +..=.+.|-.+..+. +||.+|.+..+|..+...++|.||++
T Consensus 255 l~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ 334 (593)
T KOG0695|consen 255 LRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVN 334 (593)
T ss_pred eeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEec
Confidence 46899999999999995 46889999999864322 222345566666555 69999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
+|+|.-++++.+ .++++...-+...|.-||.||| +.|||.||||.+|||+|.+|++||.|+|+++.--.
T Consensus 335 ggdlmfhmqrqr-----klpeeharfys~ei~lal~flh----~rgiiyrdlkldnvlldaeghikltdygmcke~l~~g 405 (593)
T KOG0695|consen 335 GGDLMFHMQRQR-----KLPEEHARFYSAEICLALNFLH----ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG 405 (593)
T ss_pred Ccceeeehhhhh-----cCcHHHhhhhhHHHHHHHHHHh----hcCeeeeeccccceEEccCCceeecccchhhcCCCCC
Confidence 999987776543 4899999999999999999999 89999999999999999999999999999975422
Q ss_pred ---CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 518 ---STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 518 ---~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
++..||+.|.|||++. +..|+..+|.|++||+++||+.|+.||+.-+.+.. ..+..+++.+++-+..++
T Consensus 406 d~tstfcgtpnyiapeilr--geeygfsvdwwalgvlmfemmagrspfdivgm~n~-----d~ntedylfqvilekqir- 477 (593)
T KOG0695|consen 406 DTTSTFCGTPNYIAPEILR--GEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNP-----DMNTEDYLFQVILEKQIR- 477 (593)
T ss_pred cccccccCCCcccchhhhc--ccccCceehHHHHHHHHHHHHcCCCCcceecCCCc-----ccchhHHHHHHHhhhccc-
Confidence 3678999999999886 56899999999999999999999999985432221 223344444444433211
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCC
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPN 630 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 630 (672)
.+..+ ..+...+++.-+++||.+|..
T Consensus 478 -------iprsl---svkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 478 -------IPRSL---SVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred -------cccee---ehhhHHHHHHhhcCCcHHhcC
Confidence 11111 122344566889999999853
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-28 Score=253.81 Aligned_cols=191 Identities=21% Similarity=0.359 Sum_probs=163.8
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcch--------HHHHHHHHHHHcCCC---CCceeeeEEEEEcCCe
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGG--------KREFEQHMEVLGRLR---HPNLVGLKAYYFAREE 430 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--------~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~ 430 (672)
.+.+.+|+|+||.|+.|.++ +...|+||.+.+.+.-. .-..-.||+||..++ |+||++++++|++++.
T Consensus 564 ttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~ 643 (772)
T KOG1152|consen 564 TTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDY 643 (772)
T ss_pred eeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCe
Confidence 34578999999999999966 46789999987644311 113567999999997 9999999999999999
Q ss_pred EEEEEeec-CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEecc
Q 005880 431 KLLVSEYM-PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDF 509 (672)
Q Consensus 431 ~~lv~e~~-~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 509 (672)
+||+||-. ++.+|++++... +.+++.+..-|++||+.|+++|| +.+|||||||-+||.++.+|-+||+||
T Consensus 644 yyl~te~hg~gIDLFd~IE~k-----p~m~E~eAk~IFkQV~agi~hlh----~~~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 644 YYLETEVHGEGIDLFDFIEFK-----PRMDEPEAKLIFKQVVAGIKHLH----DQGIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred eEEEecCCCCCcchhhhhhcc-----CccchHHHHHHHHHHHhcccccc----ccCceecccccccEEEecCCeEEEeec
Confidence 99999965 677999999755 45999999999999999999999 899999999999999999999999999
Q ss_pred CCCccCCCC---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 005880 510 GLSIFAPPS---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSV 563 (672)
Q Consensus 510 G~a~~~~~~---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~ 563 (672)
|.+...... ...||.+|.|||++.+ ....+..-|||++|++||.++...-||.
T Consensus 715 gsaa~~ksgpfd~f~gtv~~aapevl~g-~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSGPFDVFVGTVDYAAPEVLGG-EKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCCCcceeeeeccccchhhhCC-CccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999776654 6789999999998754 3455777899999999999999988875
No 398
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=7e-27 Score=230.91 Aligned_cols=191 Identities=35% Similarity=0.522 Sum_probs=168.2
Q ss_pred hcccCcCCeEEEEEEEEcC-CcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLDD-GSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||+++++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 83 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGD 83 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCC
Confidence 4679999999999999765 899999999866554 57789999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++..... .+++..+..++.++++++.||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 84 L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~ 155 (225)
T smart00221 84 LFDYLRKKGG----KLSEEEARFYLRQILEALEYLH----SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAAL 155 (225)
T ss_pred HHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccc
Confidence 9999975431 1789999999999999999999 789999999999999999999999999998766543
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
...++..|++||.+. ....++.++|||+||++++||++|+.||..
T Consensus 156 ~~~~~~~~~~~~pe~~~-~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 156 LKTVKGTPFYLAPEVLL-GGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccceeccCCcCCHhHhc-CCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 344567799999764 556778899999999999999999999954
No 399
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=4.9e-28 Score=233.56 Aligned_cols=184 Identities=23% Similarity=0.320 Sum_probs=154.6
Q ss_pred cccCcCCeEEEEEEEE-cCCcEEEEEEcccC--CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC------eEEEEEe
Q 005880 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDA--SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE------EKLLVSE 436 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~e 436 (672)
..+|.|.- .|..+.. -.++.||+|++... .....++..+|...+..+.|+||++++.++.-.. +.|+|||
T Consensus 23 ~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e 101 (369)
T KOG0665|consen 23 KPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVME 101 (369)
T ss_pred cccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHH
Confidence 45777777 5555552 25889999987542 2335677889999999999999999999986433 5689999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|| .++|...++- .++-.++..|..|++.|+.||| +.+|+||||||+||++..+..+||.|||+|+...
T Consensus 102 ~m-~~nl~~vi~~-------elDH~tis~i~yq~~~~ik~lh----s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~ 169 (369)
T KOG0665|consen 102 LM-DANLCQVILM-------ELDHETISYILYQMLCGIKHLH----SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED 169 (369)
T ss_pred hh-hhHHHHHHHH-------hcchHHHHHHHHHHHHHHHHHH----hcceeecccCcccceecchhheeeccchhhcccC
Confidence 99 6699988872 3788899999999999999999 8999999999999999999999999999998766
Q ss_pred CC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 517 PS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 517 ~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
.. .+..|..|+|||++.+. .+.+.+||||.||++.||++|+.-|.+
T Consensus 170 ~~~~mtpyVvtRyyrapevil~~--~~ke~vdiwSvGci~gEli~~~Vlf~g 219 (369)
T KOG0665|consen 170 TDFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGELILGTVLFPG 219 (369)
T ss_pred cccccCchhheeeccCchheecc--CCcccchhhhhhhHHHHHhhceEEecC
Confidence 54 55668889999988644 489999999999999999999998864
No 400
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.4e-27 Score=222.31 Aligned_cols=261 Identities=21% Similarity=0.315 Sum_probs=189.4
Q ss_pred cccCHHHHHHHHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEE-EEcCC
Q 005880 353 KRFELEDLLRASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAY-YFARE 429 (672)
Q Consensus 353 ~~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~-~~~~~ 429 (672)
+..+++|. +.+.+.+|+|.||.+-++..+ +.+.+++|.+..... ..++|.+|..---.| .|.||+.-++. |...+
T Consensus 18 ~kv~l~d~-y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d 95 (378)
T KOG1345|consen 18 KKVDLEDV-YTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD 95 (378)
T ss_pred cccchhhh-hhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCc
Confidence 44555553 456788999999999999966 568899999876543 678899998765555 58999988765 45567
Q ss_pred eEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC--CCCcEEEe
Q 005880 430 EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD--KTGNARVS 507 (672)
Q Consensus 430 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~--~~~~~kl~ 507 (672)
.++.++||++.|+|.+-+... .+.+....+++.|+++|+.|+| +.++||||||.+||||- +..++|||
T Consensus 96 ~YvF~qE~aP~gdL~snv~~~------GigE~~~K~v~~ql~SAi~fMH----sknlVHRdlK~eNiLif~~df~rvKlc 165 (378)
T KOG1345|consen 96 AYVFVQEFAPRGDLRSNVEAA------GIGEANTKKVFAQLLSAIEFMH----SKNLVHRDLKAENILIFDADFYRVKLC 165 (378)
T ss_pred eEEEeeccCccchhhhhcCcc------cccHHHHHHHHHHHHHHHHHhh----ccchhhcccccceEEEecCCccEEEee
Confidence 778999999999999888643 2788889999999999999999 89999999999999983 34589999
Q ss_pred ccCCCccCCCC--CCCCCCcccCCCcccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHH
Q 005880 508 DFGLSIFAPPS--TVPRSNGYRAPELSSS---DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRW 582 (672)
Q Consensus 508 DfG~a~~~~~~--~~~~t~~y~aPE~l~~---~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 582 (672)
|||+.+..... ...-+..|.|||+... ......+.+|||.||+++|..+||+.||+.+... ...+..|
T Consensus 166 DFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~-------d~~Y~~~ 238 (378)
T KOG1345|consen 166 DFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM-------DKPYWEW 238 (378)
T ss_pred ecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc-------CchHHHH
Confidence 99998766543 2223557999996533 2334567899999999999999999999844322 2334444
Q ss_pred HHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 583 VQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
.+...+.. ..+. ..+.... ....++-++-+..+|++|-...++.++....
T Consensus 239 ~~w~~rk~--~~~P----~~F~~fs---~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~ 288 (378)
T KOG1345|consen 239 EQWLKRKN--PALP----KKFNPFS---EKALRLFKKSLTPRFKDRCKIWTAKKMRKCL 288 (378)
T ss_pred HHHhcccC--ccCc----hhhcccC---HHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence 43322221 1111 1111112 2345555689999999996666666665443
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=3.5e-28 Score=254.17 Aligned_cols=245 Identities=24% Similarity=0.335 Sum_probs=196.9
Q ss_pred HhcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
..+.+|+|.||.|||++ ...++..|||+++-....+..-.++|+-+++..+|||||.++|.|..++..++.||||.+|+
T Consensus 19 llqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggs 98 (829)
T KOG0576|consen 19 LLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGS 98 (829)
T ss_pred heeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCc
Confidence 34789999999999999 45799999999987666677788999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC-----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP----- 517 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~----- 517 (672)
|++.-+.. .++++.++...++...+||+||| +.+-+|||||-.||++++.|.+|++|||.+..+..
T Consensus 99 lQdiy~~T-----gplselqiayvcRetl~gl~ylh----s~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Kr 169 (829)
T KOG0576|consen 99 LQDIYHVT-----GPLSELQIAYVCRETLQGLKYLH----SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKR 169 (829)
T ss_pred ccceeeec-----ccchhHHHHHHHhhhhccchhhh----cCCcccccccccceeecccCceeecccCchhhhhhhhhhh
Confidence 99887643 46999999999999999999999 88999999999999999999999999999865543
Q ss_pred CCCCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 518 STVPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 518 ~~~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
....||+.|||||+... ....|..++|||+.|+...|+---++|.... ...+-..-. ....+
T Consensus 170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl------------hpmr~l~Lm-----TkS~~ 232 (829)
T KOG0576|consen 170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL------------HPMRALFLM-----TKSGF 232 (829)
T ss_pred hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc------------chHHHHHHh-----hccCC
Confidence 36789999999997543 3567889999999999999998888775321 111111111 11223
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
++.-... -......+-++++.|+-++|.+||+++.++.
T Consensus 233 qpp~lkD--k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 233 QPPTLKD--KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCCcccC--CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 3222211 1234456778888999999999999987653
No 402
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=2.8e-28 Score=247.74 Aligned_cols=203 Identities=25% Similarity=0.299 Sum_probs=167.4
Q ss_pred ccCHHHHHH---HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCC------CCceeeeEE
Q 005880 354 RFELEDLLR---ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLR------HPNLVGLKA 423 (672)
Q Consensus 354 ~~~~~~l~~---~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~~ 423 (672)
++.+.|++. .+....|+|-|++|.+|... -|..||||+++.... ..+.=..|+++|.+|. --|+++++.
T Consensus 423 rv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r 501 (752)
T KOG0670|consen 423 RVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFR 501 (752)
T ss_pred EEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHH
Confidence 444555442 23457899999999999954 488999999986544 3455578999999995 358999999
Q ss_pred EEEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC-C
Q 005880 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT-G 502 (672)
Q Consensus 424 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~-~ 502 (672)
.|...++.|||||-+ .-+|.++|+.... ..-+....+..++.|+.-||..|. ..+|+|.||||+||||++. .
T Consensus 502 ~F~hknHLClVFE~L-slNLRevLKKyG~--nvGL~ikaVRsYaqQLflALklLK----~c~vlHaDIKPDNiLVNE~k~ 574 (752)
T KOG0670|consen 502 HFKHKNHLCLVFEPL-SLNLREVLKKYGR--NVGLHIKAVRSYAQQLFLALKLLK----KCGVLHADIKPDNILVNESKN 574 (752)
T ss_pred HhhhcceeEEEehhh-hchHHHHHHHhCc--ccceeehHHHHHHHHHHHHHHHHH----hcCeeecccCccceEeccCcc
Confidence 999999999999988 5599999986542 345888999999999999999999 8899999999999999975 5
Q ss_pred cEEEeccCCCccCCCCCC---CCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 005880 503 NARVSDFGLSIFAPPSTV---PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDG 566 (672)
Q Consensus 503 ~~kl~DfG~a~~~~~~~~---~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~ 566 (672)
.+||||||.|........ ..+..|+|||++. |..|+...|+||.||.||||.||+..|.+..
T Consensus 575 iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiL--G~~yd~~iD~WSvgctLYElYtGkIlFpG~T 639 (752)
T KOG0670|consen 575 ILKLCDFGSASFASENEITPYLVSRFYRAPEIIL--GLPYDYPIDTWSVGCTLYELYTGKILFPGRT 639 (752)
T ss_pred eeeeccCccccccccccccHHHHHHhccCcceee--cCcccCCccceeeceeeEEeeccceecCCCC
Confidence 689999999987766533 3356799999876 6788999999999999999999999987643
No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=6.3e-27 Score=234.37 Aligned_cols=189 Identities=26% Similarity=0.392 Sum_probs=161.6
Q ss_pred HhcccCcCCeEEEEEEEEc----CCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVLD----DGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
..++||+|.|++||++... ..+.||+|.+...+ ....+..|+++|..+ .+.||+++.+++..++...+|+||+
T Consensus 40 ~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~ 117 (418)
T KOG1167|consen 40 VVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYF 117 (418)
T ss_pred hhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEeccc
Confidence 3578999999999999943 46889999987654 456789999999999 4999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-CCcEEEeccCCCccC--
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK-TGNARVSDFGLSIFA-- 515 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~-~~~~kl~DfG~a~~~-- 515 (672)
++..-.++... ++...+..+++.+.+||+++| ..|||||||||+|++.+. -+.-.|.|||+|...
T Consensus 118 ~H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h----~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 118 EHDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLH----KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred CccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhh----ccCccccCCCccccccccccCCceEEechhHHHHHh
Confidence 99998888753 678899999999999999999 899999999999999985 578899999998510
Q ss_pred ---------------CC--------------------------------CCCCCCCcccCCCccccCCCCCCchhHHHHH
Q 005880 516 ---------------PP--------------------------------STVPRSNGYRAPELSSSDGRKQSQKSDVYSF 548 (672)
Q Consensus 516 ---------------~~--------------------------------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~ 548 (672)
.+ ....||+||+|||++.. ....++++||||.
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k-~~~QttaiDiws~ 264 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR-CPRQTTAIDIWSA 264 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh-ccCcCCccceeec
Confidence 00 02357889999999864 4566889999999
Q ss_pred HHHHHHHHhCCCCCCCCCC
Q 005880 549 GVLLLELLTGKCPSVIDGG 567 (672)
Q Consensus 549 Gvvl~el~tg~~P~~~~~~ 567 (672)
|||++-+++++.||....+
T Consensus 265 GVI~Lslls~~~PFf~a~d 283 (418)
T KOG1167|consen 265 GVILLSLLSRRYPFFKAKD 283 (418)
T ss_pred cceeehhhccccccccCcc
Confidence 9999999999999986544
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=7.8e-25 Score=208.14 Aligned_cols=168 Identities=23% Similarity=0.282 Sum_probs=126.7
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCCC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV 520 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 520 (672)
|+|.++++... .+++|.+++.|+.|+++||+||| +.+ ||+||+++.++.+|+ ||+++.......
T Consensus 1 GsL~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~lH----~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~ 64 (176)
T smart00750 1 VSLADILEVRG----RPLNEEEIWAVCLQCLRALRELH----RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQS 64 (176)
T ss_pred CcHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHH----hcC------CcccEeEcCccceee--ccceEeeccccC
Confidence 78999997542 45999999999999999999999 444 999999999999999 999988776666
Q ss_pred CCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhh
Q 005880 521 PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLEL 600 (672)
Q Consensus 521 ~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (672)
.++..|+|||++. +..++.++|||||||++|||+||+.||..... ............... ++..
T Consensus 65 ~g~~~y~aPE~~~--~~~~~~~~DiwSlG~il~elltg~~p~~~~~~-----------~~~~~~~~~~~~~~~---~~~~ 128 (176)
T smart00750 65 RVDPYFMAPEVIQ--GQSYTEKADIYSLGITLYEALDYELPYNEERE-----------LSAILEILLNGMPAD---DPRD 128 (176)
T ss_pred CCcccccChHHhc--CCCCcchhhHHHHHHHHHHHHhCCCCccccch-----------hcHHHHHHHHHhccC---Cccc
Confidence 7899999999775 55788999999999999999999999964321 112222222111100 0000
Q ss_pred ccccChHHHH--HHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 601 MRYKDIEEEM--VGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 601 ~~~~~~~~~~--~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
........ ..+.+++.+||+.+|.+||++.|+++.+..+.
T Consensus 129 --~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 129 --RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred --cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 00111122 25889999999999999999999999887664
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=8.8e-26 Score=263.58 Aligned_cols=189 Identities=19% Similarity=0.199 Sum_probs=135.6
Q ss_pred CCCC-CceeeeEEEE-------EcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC
Q 005880 412 RLRH-PNLVGLKAYY-------FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483 (672)
Q Consensus 412 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~ 483 (672)
.++| +||+++++++ ......+.++||+ +++|.+++.... ..+++.+++.++.||++||+||| +
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH----~ 98 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD----RSVDAFECFHVFRQIVEIVNAAH----S 98 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc----ccccHHHHHHHHHHHHHHHHHHH----h
Confidence 3556 6888888877 2234566788887 669999997432 45999999999999999999999 8
Q ss_pred CCcEecCCCCCCEEeCC-------------------CCcEEEeccCCCccCCCC---------------------CCCCC
Q 005880 484 LKLTHGNIKSTNVLLDK-------------------TGNARVSDFGLSIFAPPS---------------------TVPRS 523 (672)
Q Consensus 484 ~~iiH~Dlkp~NIll~~-------------------~~~~kl~DfG~a~~~~~~---------------------~~~~t 523 (672)
.+|+||||||+||||+. ++.+|++|||+++..... ...+|
T Consensus 99 ~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 178 (793)
T PLN00181 99 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEM 178 (793)
T ss_pred CCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCC
Confidence 89999999999999954 445677777776532110 12357
Q ss_pred CcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccc
Q 005880 524 NGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRY 603 (672)
Q Consensus 524 ~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (672)
..|+|||++. +..++.++|||||||++|||++|.+|+.... ..+.... .. .+.+..
T Consensus 179 ~~Y~APE~~~--~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--------------~~~~~~~-~~----~~~~~~--- 234 (793)
T PLN00181 179 SWYTSPEEDN--GSSSNCASDVYRLGVLLFELFCPVSSREEKS--------------RTMSSLR-HR----VLPPQI--- 234 (793)
T ss_pred cceEChhhhc--cCCCCchhhhhhHHHHHHHHhhCCCchhhHH--------------HHHHHHH-Hh----hcChhh---
Confidence 7799999765 4578999999999999999999988864210 1111111 10 111110
Q ss_pred cChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 604 KDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 604 ~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.........++.+||+.+|.+||+|.|+++
T Consensus 235 ---~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 235 ---LLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred ---hhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 111233557788999999999999999975
No 406
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.7e-25 Score=210.71 Aligned_cols=256 Identities=23% Similarity=0.367 Sum_probs=188.0
Q ss_pred cCHHHHHHHHhcccCcCCeEEEEEEEEcCCcEEEEEEccc--CCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEE
Q 005880 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKD--ASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKL 432 (672)
Q Consensus 355 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 432 (672)
+++.++ .+..+|.+...|..|+|+++ |..+++|+++- ......++|..|.-.|+-..||||+.++|.|.......
T Consensus 187 id~~~l--nl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv 263 (448)
T KOG0195|consen 187 IDVSSL--NLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLV 263 (448)
T ss_pred cchhhh--hhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence 344444 34567999999999999998 55566777753 33334578999999999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEe--ccC
Q 005880 433 LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVS--DFG 510 (672)
Q Consensus 433 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~--DfG 510 (672)
++..||+.|+|+..|+.... ..++-.+..+++.++|+|++|||+- ++-|..--|.+..|++|++.+++|+ |--
T Consensus 264 ~isq~mp~gslynvlhe~t~---vvvd~sqav~faldiargmaflhsl--ep~ipr~~lns~hvmidedltarismad~k 338 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTS---VVVDHSQAVRFALDIARGMAFLHSL--EPMIPRFYLNSKHVMIDEDLTARISMADTK 338 (448)
T ss_pred EeeeeccchHHHHHHhcCcc---EEEecchHHHHHHHHHhhHHHHhhc--chhhhhhhcccceEEecchhhhheecccce
Confidence 99999999999999997652 5578889999999999999999954 3334445689999999999998875 322
Q ss_pred CCccCCCCCCCCCCcccCCCccccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 511 LSIFAPPSTVPRSNGYRAPELSSSDGR-KQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 511 ~a~~~~~~~~~~t~~y~aPE~l~~~~~-~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
++ +......-++.|++||.++.... ..-.++|+|||.+++|||.|...||..-.+-+ ++.. +.-+
T Consensus 339 fs--fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspme---cgmk---------iale 404 (448)
T KOG0195|consen 339 FS--FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPME---CGMK---------IALE 404 (448)
T ss_pred ee--eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchh---hhhh---------hhhc
Confidence 21 11122233578999997754321 23358999999999999999999997543221 1110 0001
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
+ . +...++.+. ..+.+++.-|++.||.+||.++.|+-.|++++
T Consensus 405 g-l------rv~ippgis---~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 405 G-L------RVHIPPGIS---RHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred c-c------cccCCCCcc---HHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 1 0 111122333 34566777899999999999999999999875
No 407
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.90 E-value=1.5e-23 Score=251.48 Aligned_cols=184 Identities=33% Similarity=0.617 Sum_probs=128.9
Q ss_pred ChhhHHHHHHHHhcCCCC-CCCCCCCCCCCCCcccceEEcC-CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCC
Q 005880 25 TSPDLNALLDFKASSDEA-NKLTTWNSTSDPCSWTGVSCLQ-NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFT 101 (672)
Q Consensus 25 ~~~d~~all~~k~~~~~~-~~~~~W~~~~~~c~w~gv~c~~-~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~ 101 (672)
.+.|..||++||+++.++ +.+.+|+.+.+||.|.||+|.. ++|+.|+|++|+++|.++. +..+++|+.|+|++|+++
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~ 106 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLS 106 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCCCCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccC
Confidence 558999999999998644 4578998888999999999974 7999999999999987765 778888888888888888
Q ss_pred CCCC-C-CCcccccceeeccccccCC----------------------CCChhhhccCCCCeEecccCccccccchhhcC
Q 005880 102 GPVP-S-LSNLTALKLLFLSHNNFNG----------------------EFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNH 157 (672)
Q Consensus 102 ~~~p-~-~~~l~~L~~L~l~~N~l~g----------------------~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~ 157 (672)
|.+| . +.++++|++|+|++|+++| .+|..++++++|++|+|++|.+++.+|..+++
T Consensus 107 ~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 186 (968)
T PLN00113 107 GPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTN 186 (968)
T ss_pred CcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhh
Confidence 7766 3 3356666666665555554 55555566666666666666666666666666
Q ss_pred CCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCCCcCCCCCCcc
Q 005880 158 LTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSA 208 (672)
Q Consensus 158 l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~ 208 (672)
+++|++|+|++|++++.++ +..+++|+.|+|++|++++.+|..+.+++.+.
T Consensus 187 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 239 (968)
T PLN00113 187 LTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLN 239 (968)
T ss_pred CcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCC
Confidence 6666666666666655332 34566666666666666666665555544443
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=5.9e-23 Score=213.48 Aligned_cols=152 Identities=20% Similarity=0.210 Sum_probs=119.1
Q ss_pred hcccCcCCeEEEEEEEEc--CCcEEEEEEcccC-----CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD--DGSVVAVKRLKDA-----SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.||+|+||+||+|+.. +++.||||++... .....+.|.+|++++++++|+|+++.+.. .+..++||||
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~LVmE~ 99 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDGLVRGW 99 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcEEEEEc
Confidence 467999999999999864 5788899987532 11235679999999999999999853322 2467999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCC-CCCCEEeCCCCcEEEeccCCCccCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNI-KSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dl-kp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
+++++|... . . .. ...++.++++||+||| +.+|+|||| ||+|||++.++++||+|||+++...
T Consensus 100 ~~G~~L~~~-~-~-------~~---~~~~~~~i~~aL~~lH----~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~ 163 (365)
T PRK09188 100 TEGVPLHLA-R-P-------HG---DPAWFRSAHRALRDLH----RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFR 163 (365)
T ss_pred cCCCCHHHh-C-c-------cc---hHHHHHHHHHHHHHHH----HCCCeeCCCCCcceEEEcCCCCEEEEECccceecc
Confidence 999999632 1 1 01 1467889999999999 889999999 9999999999999999999998654
Q ss_pred CC-------------CCCCCCcccCCCccccC
Q 005880 517 PS-------------TVPRSNGYRAPELSSSD 535 (672)
Q Consensus 517 ~~-------------~~~~t~~y~aPE~l~~~ 535 (672)
.. ...++..|+|||.+...
T Consensus 164 ~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 164 RRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 32 23356679999976543
No 409
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=3e-21 Score=201.43 Aligned_cols=263 Identities=22% Similarity=0.214 Sum_probs=192.3
Q ss_pred HhcccCcCCeEEEEEEEEcCC--cEEEEEEcccCCcchHHHHHHHHHHHcCCCC----CceeeeEEEE-EcCCeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVLDDG--SVVAVKRLKDASIGGKREFEQHMEVLGRLRH----PNLVGLKAYY-FAREEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g--~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~-~~~~~~~lv~e 436 (672)
+...||+|+||.||++..... ..+|+|............+..|..++..+.. +++..+++.. ..+...++||+
T Consensus 22 i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~ 101 (322)
T KOG1164|consen 22 LGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMS 101 (322)
T ss_pred EeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEe
Confidence 457899999999999996543 5788888765433333367888888888762 6889999888 47778999999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC-----CcEEEeccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT-----GNARVSDFGL 511 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~-----~~~kl~DfG~ 511 (672)
.+ |.+|.++..... ...++..+..+|+.|++.+|.+|| +.|++||||||.|+.+... -.+.|.|||+
T Consensus 102 l~-G~sL~dl~~~~~---~~~fs~~T~l~ia~q~l~~l~~lH----~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 102 LL-GPSLEDLRKRNP---PGRFSRKTVLRIAIQNLNALEDLH----SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred cc-CccHHHHHHhCC---CCCcCHhHHHHHHHHHHHHHHHHH----hcCcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 98 889999886543 356999999999999999999999 8999999999999999854 3599999999
Q ss_pred CccCC-----------C----CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC
Q 005880 512 SIFAP-----------P----STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGA 576 (672)
Q Consensus 512 a~~~~-----------~----~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~ 576 (672)
++... . ....||..|+++. ...+...+.+.|+||++.++.|++.|..||.......
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~--~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~------- 244 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASIN--VHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD------- 244 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHH--HhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccc-------
Confidence 98221 1 1233788999999 5567888999999999999999999999996433211
Q ss_pred CChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCC
Q 005880 577 VDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPCHENFDS 655 (672)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~~~~~~ 655 (672)
...-+....... .... ....... .+.++...+-..+..++|....+.+.+++............+++
T Consensus 245 --~~~~~~~~~~~~----~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw 311 (322)
T KOG1164|consen 245 --LKSKFEKDPRKL----LTDR---FGDLKPE---EFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDW 311 (322)
T ss_pred --hHHHHHHHhhhh----cccc---ccCCChH---HHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCcc
Confidence 111111111111 1110 0111122 34444445556899999999999999998876665555555543
No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.5e-21 Score=181.32 Aligned_cols=266 Identities=18% Similarity=0.219 Sum_probs=196.1
Q ss_pred hcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCC-CceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRH-PNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.++||+|+||.+|.|. ..+|+.||||.-.... ...++..|.++...++| ..|..+.-|..+.....+|||.+ |.+
T Consensus 20 vrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPs 96 (341)
T KOG1163|consen 20 VRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPS 96 (341)
T ss_pred EEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-Ccc
Confidence 4789999999999999 7789999999865433 33467778888888864 56666666777788889999999 889
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC---CCCcEEEeccCCCccCCCC-
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD---KTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~---~~~~~kl~DfG~a~~~~~~- 518 (672)
|.+++.-.. +.++..+++-++-|++.-++|+| .+++|||||||+|.|.. ....+.++|||+|+.....
T Consensus 97 LEdLfnfC~----R~ftmkTvLMLaDQml~RiEyvH----~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~ 168 (341)
T KOG1163|consen 97 LEDLFNFCS----RRFTMKTVLMLADQMLSRIEYVH----LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR 168 (341)
T ss_pred HHHHHHHHh----hhhhHHhHHHHHHHHHHHHHHHH----hhccccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence 999987543 45899999999999999999999 78999999999999986 3456999999999765432
Q ss_pred -----------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 519 -----------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 519 -----------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
...||.+|.+-. ...+...+.+.|+=|+|.++...-.|..||++-.... ....-+.+
T Consensus 169 t~~HIpyre~r~ltGTaRYASin--Ah~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~t----------k~QKyEkI 236 (341)
T KOG1163|consen 169 TRQHIPYREDRNLTGTARYASIN--AHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAAT----------KKQKYEKI 236 (341)
T ss_pred ccccCccccCCccceeeeehhhh--hhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhh----------HHHHHHHH
Confidence 456788888766 3334556778899999999999999999998643221 01111112
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPCHENFDSVSDS 659 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~~~~~~~~~~ 659 (672)
.+..+...+. .. ... .+.++.-.+.-|-..--++-|+..-+.+.++-+.+...+...-.++|++..
T Consensus 237 ~EkK~s~~ie--~L-C~G---~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~lk 302 (341)
T KOG1163|consen 237 SEKKMSTPIE--VL-CKG---FPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTMLK 302 (341)
T ss_pred HHhhcCCCHH--HH-hCC---CcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHHH
Confidence 2221111111 00 111 223566666788888889999999998888888777777666777776544
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=3e-20 Score=194.07 Aligned_cols=254 Identities=30% Similarity=0.375 Sum_probs=190.0
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCCCC-ceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHP-NLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||.|+||.||++... ..+++|.+...... ....+.+|+.+++.+.|+ +++++.+++......+++++|+.+
T Consensus 5 ~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 82 (384)
T COG0515 5 LRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDG 82 (384)
T ss_pred EEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCC
Confidence 467899999999999977 78899998754332 367899999999999988 799999999777778999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC-cEEEeccCCCccCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG-NARVSDFGLSIFAPP-- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~-~~kl~DfG~a~~~~~-- 517 (672)
+++.+++...... ..+.......+..|++.++.|+| +.+++|||+||+||+++..+ .++++|||.++....
T Consensus 83 ~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H----~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 83 GSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLH----SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 9999777644311 25889999999999999999999 78899999999999999988 799999999874432
Q ss_pred ---------CCCCCCCcccCCCccccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 518 ---------STVPRSNGYRAPELSSSDG-RKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 518 ---------~~~~~t~~y~aPE~l~~~~-~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
....++..|+|||.+.... ..+....|+||+|++++++++|..||...... ..........
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---------~~~~~~~~~~ 227 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---------SATSQTLKII 227 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---------ccHHHHHHHH
Confidence 2456788999999765321 57888999999999999999999997543210 0011111111
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
...... ........ .........+.+++..|+..+|..|.++.+....
T Consensus 228 ~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 228 LELPTP-SLASPLSP-SNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HhcCCc-ccccccCc-cccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 111111 00000000 0001122456778889999999999999887765
No 412
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.6e-20 Score=182.24 Aligned_cols=268 Identities=17% Similarity=0.209 Sum_probs=198.6
Q ss_pred HHhcccCcCCeEEEEEEE-EcCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 363 ASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.++++||+|.||.++.|+ +-+++.||||.-...+ ...++..|.+..+.| ..+.|..++-+.....+..||+|.+ |
T Consensus 31 rVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-G 107 (449)
T KOG1165|consen 31 RVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-G 107 (449)
T ss_pred eeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-C
Confidence 457899999999999999 5679999999765433 456777888877777 4789998887777788889999999 8
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC-----cEEEeccCCCccC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG-----NARVSDFGLSIFA 515 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~-----~~kl~DfG~a~~~ 515 (672)
.+|.|++.-.. +.++..++..+|.|++.-++|+| ++.+|.|||||+|.||..-+ .+.|+|||+|+..
T Consensus 108 PSLEDLFD~Cg----R~FSvKTV~miA~Qmi~rie~vH----~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 108 PSLEDLFDLCG----RRFSVKTVAMIAKQMITRIEYVH----EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred cCHHHHHHHhc----CcccHHhHHHHHHHHHHHHHHHH----hcceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 89999987553 46999999999999999999999 88999999999999997533 4899999999866
Q ss_pred CCC------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHH
Q 005880 516 PPS------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWV 583 (672)
Q Consensus 516 ~~~------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 583 (672)
... ...||.+||+-. ..-+...+.+.|+=|+|-|+...+.|..||.+-... ...+-.
T Consensus 180 rDp~TkqHIPYrE~KSLsGTARYMSIN--THlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~---------tnK~kY 248 (449)
T KOG1165|consen 180 RDPKTKQHIPYREHKSLSGTARYMSIN--THLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD---------TNKEKY 248 (449)
T ss_pred cCccccccCccccccccccceeeeEee--ccccchhhhhhhHHHhhhhhhhhccCCCccccccCc---------chHHHH
Confidence 542 346789999887 556778889999999999999999999999865422 122222
Q ss_pred HHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 005880 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPCHENFDSVSDS 659 (672)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~~~~~~~~~~ 659 (672)
+.+-.......+-+ . ....++++...++.+ -+.+-.+-|+.+-+...+..+.+...--....++|+...
T Consensus 249 eKIGe~Kr~T~i~~---L-c~g~P~efa~Yl~yv---R~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW~~ln 317 (449)
T KOG1165|consen 249 EKIGETKRSTPIEV---L-CEGFPEEFATYLRYV---RRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDWMGLN 317 (449)
T ss_pred HHhccccccCCHHH---H-HhcCHHHHHHHHHHH---HhcCcccCCCHHHHHHHHHHHHHhcCCcccccccccccC
Confidence 22211111111111 1 122344444444444 447888889999998888888765544455566665544
No 413
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.84 E-value=5.2e-21 Score=183.04 Aligned_cols=138 Identities=17% Similarity=0.235 Sum_probs=107.5
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc--h-------HHH-----------------HHHHHHHHcCCCCCcee
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG--G-------KRE-----------------FEQHMEVLGRLRHPNLV 419 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~-------~~~-----------------~~~e~~~l~~l~h~niv 419 (672)
..||+|+||.||+|...+|+.||||+++..... . ... ...|++.+.++.++++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 579999999999999878999999999753211 1 112 23499999999887764
Q ss_pred eeEEEEEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhhCCCCCcEecCCCCCCEEe
Q 005880 420 GLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI-HFTCKSLKLTHGNIKSTNVLL 498 (672)
Q Consensus 420 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~~~~~~iiH~Dlkp~NIll 498 (672)
....+.. ...++||||++++++....... .++++.....++.|++.+|.|+ | +.+|+||||||+||++
T Consensus 83 ~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~-----~~~~~~~~~~i~~qi~~~L~~l~H----~~giiHrDlkP~NIli 151 (190)
T cd05147 83 CPEPILL--KSHVLVMEFIGDDGWAAPRLKD-----APLSESKARELYLQVIQIMRILYQ----DCRLVHADLSEYNLLY 151 (190)
T ss_pred CCcEEEe--cCCEEEEEEeCCCCCcchhhhc-----CCCCHHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEE
Confidence 4433322 2348999999988776543221 3488999999999999999999 6 6799999999999999
Q ss_pred CCCCcEEEeccCCCccC
Q 005880 499 DKTGNARVSDFGLSIFA 515 (672)
Q Consensus 499 ~~~~~~kl~DfG~a~~~ 515 (672)
+ ++.++|+|||+|...
T Consensus 152 ~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 152 H-DGKLYIIDVSQSVEH 167 (190)
T ss_pred E-CCcEEEEEccccccC
Confidence 8 478999999998654
No 414
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=7.3e-22 Score=218.76 Aligned_cols=245 Identities=20% Similarity=0.285 Sum_probs=174.9
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccC--CcchHH----HHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA--SIGGKR----EFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~----~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
..++|.|++|.|+..... .....+.|..+.. .....+ .+..|+-+-..++|+|++..+..+.+.....-+|||
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~ 402 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEY 402 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhc
Confidence 467999999988877733 3444444443210 111111 255677777888999998887777766666666999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++ +|+.++... ..+...++..++.|+..|++|+| ..+|.|||+|++|++++.+|.+||+|||.+.....
T Consensus 403 ~~~-Dlf~~~~~~-----~~~~~~e~~c~fKqL~~Gv~y~h----~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 403 CPY-DLFSLVMSN-----GKLTPLEADCFFKQLLRGVKYLH----SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred ccH-HHHHHHhcc-----cccchhhhhHHHHHHHHHHHHHH----hcCceeccCccccEEEecCCceEEeecCcceeecc
Confidence 999 999999764 24788899999999999999999 89999999999999999999999999999865432
Q ss_pred ---------CCCCCCCcccCCCccccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 518 ---------STVPRSNGYRAPELSSSDGRKQ-SQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 518 ---------~~~~~t~~y~aPE~l~~~~~~~-~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
....|+..|+|||++.. ..| ....||||.|+++..|.+|+.||......+.. . ....
T Consensus 473 ~~e~~~~~~~g~~gS~pY~apE~~~~--~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~-------~----~~~~ 539 (601)
T KOG0590|consen 473 PWEKNIHESSGIVGSDPYLAPEVLTG--KEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNS-------F----KTNN 539 (601)
T ss_pred CcchhhhhhcCcccCCcCcCcccccc--cccCcchhhhhhccceEEEEecCCCccccccccccc-------h----hhhc
Confidence 25667889999997653 344 45789999999999999999999765432210 0 0000
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.......... ...-......+-..++.++|+.||.+|.|+++|++
T Consensus 540 ~~~~~~~~~~----~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 540 YSDQRNIFEG----PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cccccccccC----hHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 0000000000 00111233445667888999999999999999975
No 415
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=5.1e-20 Score=173.92 Aligned_cols=183 Identities=18% Similarity=0.175 Sum_probs=138.5
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc----hHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG----GKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~----~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
...|++|+||+||.+.. ++..++.+.+.....- ....+.+|+++|++++ |+++.+++++ +..+++|||++
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~ 81 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA 81 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence 46799999999997766 5788888877654431 1236889999999995 5889999886 45689999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCC-CCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNI-KSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dl-kp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
|.+|...+.. ....++.|++++|.++| +.||+|||| ||+||++++++.++|+|||++......
T Consensus 82 G~~L~~~~~~------------~~~~~~~qi~~~L~~lH----~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 82 GAAMYQRPPR------------GDLAYFRAARRLLQQLH----RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred CccHHhhhhh------------hhHHHHHHHHHHHHHHH----HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 9998654321 11357789999999999 889999999 799999999999999999999855433
Q ss_pred CC------------------CCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCC
Q 005880 519 TV------------------PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGG 568 (672)
Q Consensus 519 ~~------------------~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~ 568 (672)
.. ..++.|++|+.-.......-...+.++-|.-+|.++|++.++..++++
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~ 213 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNEG 213 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCCC
Confidence 21 124556677632211222225678899999999999999998776544
No 416
>PLN03150 hypothetical protein; Provisional
Probab=99.83 E-value=3.8e-20 Score=208.21 Aligned_cols=130 Identities=34% Similarity=0.596 Sum_probs=69.7
Q ss_pred CCChhhHHHHHHHHhcCCCCCCCCCCCCCCCCC-----cccceEEcCC------cEeEEEecCCCcccCCCC-CCCCCCc
Q 005880 23 ASTSPDLNALLDFKASSDEANKLTTWNSTSDPC-----SWTGVSCLQN------RVSHLVLENLQLSGSLQP-LTSLTQL 90 (672)
Q Consensus 23 ~~~~~d~~all~~k~~~~~~~~~~~W~~~~~~c-----~w~gv~c~~~------~v~~L~l~~~~l~~~~~~-l~~l~~L 90 (672)
.+...|..||+++|++++.+. ..+|+. ++| .|.||.|... +|+.|+|++|+|.|.++. ++.|++|
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~-~~~W~g--~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L 444 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPL-RFGWNG--DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHL 444 (623)
T ss_pred ccCchHHHHHHHHHHhcCCcc-cCCCCC--CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCC
Confidence 345679999999999886433 248963 455 7999999531 244555555555444333 4444444
Q ss_pred cEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhh
Q 005880 91 RVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTV 155 (672)
Q Consensus 91 ~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~ 155 (672)
+.|+|++|+|+|.+| .++++++|+.|+|++|+|+|.+|+.+++|++|+.|+|++|+|+|.+|..+
T Consensus 445 ~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l 510 (623)
T PLN03150 445 QSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510 (623)
T ss_pred CEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHH
Confidence 444444444444444 34444444444444444444444444444444444444444444444433
No 417
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.83 E-value=3.4e-20 Score=196.01 Aligned_cols=215 Identities=25% Similarity=0.383 Sum_probs=162.6
Q ss_pred HcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCc-Ee
Q 005880 410 LGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKL-TH 488 (672)
Q Consensus 410 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~i-iH 488 (672)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.... ..++|.....+.+++++||+||| ..+| .|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~----~~~d~~F~~s~~rdi~~Gl~ylh----~s~i~~h 72 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED----IKLDYFFILSFIRDISKGLAYLH----NSPIGYH 72 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc----cCccHHHHHHHHHHHHHHHHHHh----cCcceee
Confidence 456899999999999999999999999999999999998643 56999999999999999999999 4444 99
Q ss_pred cCCCCCCEEeCCCCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccC--CCC---CCchhHHHHHHHHHHHHH
Q 005880 489 GNIKSTNVLLDKTGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSD--GRK---QSQKSDVYSFGVLLLELL 556 (672)
Q Consensus 489 ~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~--~~~---~~~~~DV~S~Gvvl~el~ 556 (672)
+.++++|.++|....+||+|||+....... ......-|.|||++... ... .+.++||||||++++|++
T Consensus 73 g~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~ 152 (484)
T KOG1023|consen 73 GALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL 152 (484)
T ss_pred eeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence 999999999999999999999998766431 01112349999987653 122 577899999999999999
Q ss_pred hCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 557 TGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 557 tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+.+.||....... +..+.+..+.. .....+-|..... .+....+..++.+||..+|++||++++|-.
T Consensus 153 ~r~~~~~~~~~~~--------~~~eii~~~~~--~~~~~~rP~i~~~---~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 153 FRSGPFDLRNLVE--------DPDEIILRVKK--GGSNPFRPSIELL---NELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred hccCccccccccC--------ChHHHHHHHHh--cCCCCcCcchhhh---hhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 9999997643221 11122222211 1111122222111 123336888999999999999999999999
Q ss_pred HHHHHhcCC
Q 005880 637 LIEELRGVE 645 (672)
Q Consensus 637 ~L~~i~~~~ 645 (672)
.++.+....
T Consensus 220 ~~~~~~~~~ 228 (484)
T KOG1023|consen 220 KLLTINKGG 228 (484)
T ss_pred hhhhhcccc
Confidence 998876543
No 418
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.83 E-value=3.3e-21 Score=212.46 Aligned_cols=241 Identities=23% Similarity=0.286 Sum_probs=174.9
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCC-cchHHHHH---HHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAS-IGGKREFE---QHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~-~~~~~~~~---~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+++|=.|.+|+.+.|. |+||++-+.. .-..+.|. .|++ ...++|||++++.-+...+...|||-+|..+
T Consensus 28 ~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh 105 (1431)
T KOG1240|consen 28 VENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVKH 105 (1431)
T ss_pred ecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHhh
Confidence 467999999999999999888 8889875433 22334444 4444 4556899999998887777778899899855
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC--CCC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA--PPS 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~--~~~ 518 (672)
+|+|.+.. ++-+...+..-|+.|++.||...| +.+|+|||||.+||||+.-.-+.|+||..-+.. +.+
T Consensus 106 -nLyDRlST-----RPFL~~iEKkWiaFQLL~al~qcH----~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 106 -NLYDRLST-----RPFLVLIEKKWIAFQLLKALSQCH----KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred -hhhhhhcc-----chHHHHHHHHHHHHHHHHHHHHHH----HcCccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 89998864 345788889999999999999999 899999999999999999989999999765432 111
Q ss_pred ----------CCCCCCcccCCCccccCC---------CCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCC
Q 005880 519 ----------TVPRSNGYRAPELSSSDG---------RKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVD 578 (672)
Q Consensus 519 ----------~~~~t~~y~aPE~l~~~~---------~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~ 578 (672)
+..+...|.|||-+...+ ...+++.||||+|||+.||++ |++||...
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS------------- 242 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS------------- 242 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-------------
Confidence 222344699999765422 125789999999999999998 58887521
Q ss_pred hhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 005880 579 LPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640 (672)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 640 (672)
+.+... +.+ -.|++..- ..++ ...+.+++..|++.||.+|.++++.++.-++
T Consensus 243 --QL~aYr-~~~----~~~~e~~L-e~Ie--d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 243 --QLLAYR-SGN----ADDPEQLL-EKIE--DVSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred --HHHhHh-ccC----ccCHHHHH-HhCc--CccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 111110 000 11111100 0001 1247788899999999999999999988433
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.82 E-value=7.1e-20 Score=175.89 Aligned_cols=138 Identities=19% Similarity=0.246 Sum_probs=110.0
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc--h------------------------HHHHHHHHHHHcCCCCCcee
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG--G------------------------KREFEQHMEVLGRLRHPNLV 419 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~------------------------~~~~~~e~~~l~~l~h~niv 419 (672)
..||+|+||.||+|+..+|+.||||+++..... . ...+.+|.+.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 579999999999999778999999998754211 0 12246789999999999886
Q ss_pred eeEEEEEcCCeEEEEEeecCCCChhHH-hhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CCcEecCCCCCCEE
Q 005880 420 GLKAYYFAREEKLLVSEYMPNGSLFWL-LHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS-LKLTHGNIKSTNVL 497 (672)
Q Consensus 420 ~l~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~~iiH~Dlkp~NIl 497 (672)
....+... ..++||||++++++... +.. ..++......++.|++.++.++| . .+|+||||||+||+
T Consensus 83 ~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~------~~~~~~~~~~i~~~l~~~l~~lH----~~~givHrDlkP~NIl 150 (190)
T cd05145 83 VPEPILLK--KNVLVMEFIGDDGSPAPRLKD------VPLEEEEAEELYEQVVEQMRRLY----QEAGLVHGDLSEYNIL 150 (190)
T ss_pred CceEEEec--CCEEEEEEecCCCchhhhhhh------ccCCHHHHHHHHHHHHHHHHHHH----HhCCEecCCCChhhEE
Confidence 55544433 34899999998865433 332 24678889999999999999999 6 89999999999999
Q ss_pred eCCCCcEEEeccCCCccCC
Q 005880 498 LDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 498 l~~~~~~kl~DfG~a~~~~ 516 (672)
++ +++++|+|||++....
T Consensus 151 l~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 151 YH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred EE-CCCEEEEEcccceecC
Confidence 99 8899999999997654
No 420
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=2.5e-20 Score=180.16 Aligned_cols=165 Identities=15% Similarity=0.180 Sum_probs=126.4
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHH---------HHHHHHHHcCCCCCceeeeEEEEEcC-------
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKRE---------FEQHMEVLGRLRHPNLVGLKAYYFAR------- 428 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~---------~~~e~~~l~~l~h~niv~l~~~~~~~------- 428 (672)
.+.+|.|+||.||+... ++..+|||.++......... +++|++.+.+++|++|..+.+++...
T Consensus 36 ~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~ 114 (232)
T PRK10359 36 IKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRY 114 (232)
T ss_pred EEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccc
Confidence 47899999999999766 57789999997544333222 68999999999999999999886643
Q ss_pred -CeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEe
Q 005880 429 -EEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVS 507 (672)
Q Consensus 429 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~ 507 (672)
...++||||++|.+|.++.. ++. ....+++.+|..+| +.+++|||+||+||++++++ ++|+
T Consensus 115 ~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH----~~gi~H~Dikp~Nili~~~g-i~li 176 (232)
T PRK10359 115 AHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLH----QHGMVSGDPHKGNFIVSKNG-LRII 176 (232)
T ss_pred cCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHH----HcCCccCCCChHHEEEeCCC-EEEE
Confidence 35789999999999987732 222 24568999999999 88999999999999999988 9999
Q ss_pred ccCCCccCCCCCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh
Q 005880 508 DFGLSIFAPPSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557 (672)
Q Consensus 508 DfG~a~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t 557 (672)
|||........... +.+. ....+..++||||||+.+.....
T Consensus 177 Dfg~~~~~~e~~a~--------d~~v-ler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 177 DLSGKRCTAQRKAK--------DRID-LERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred ECCCcccccchhhH--------HHHH-HHhHhcccccccceeEeehHHHH
Confidence 99987655322111 1111 12345679999999998876543
No 421
>PRK10345 hypothetical protein; Provisional
Probab=99.79 E-value=1.2e-18 Score=168.21 Aligned_cols=133 Identities=14% Similarity=0.174 Sum_probs=105.0
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-----CCCceeeeEEEEEcCC---eEE-EEE
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-----RHPNLVGLKAYYFARE---EKL-LVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~~~-lv~ 435 (672)
.+.||+|+||.||. .-.++.. +||++........+++.+|++++..+ .||||++++|++.++. ..+ +|+
T Consensus 7 ~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~ 84 (210)
T PRK10345 7 QSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA 84 (210)
T ss_pred cceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence 36799999999996 3334444 69988765444667899999999999 5799999999998763 333 789
Q ss_pred ee--cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHhhCCCCCcEecCCCCCCEEeCC----CCcEEEec
Q 005880 436 EY--MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL-AFIHFTCKSLKLTHGNIKSTNVLLDK----TGNARVSD 508 (672)
Q Consensus 436 e~--~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L-~~LH~~~~~~~iiH~Dlkp~NIll~~----~~~~kl~D 508 (672)
|| +++|+|.+++.... +++. ..++.+++.++ +||| +++|+||||||+||+++. +++++|+|
T Consensus 85 e~~G~~~~tL~~~l~~~~------~~e~--~~~~~~~L~~l~~yLh----~~~IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 85 DFDGKPSITLTEFAEQCR------YEED--VAQLRQLLKKLKRYLL----DNRIVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred cCCCCcchhHHHHHHccc------ccHh--HHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 99 55799999996432 4444 35677888887 9999 889999999999999974 34799999
Q ss_pred cCC
Q 005880 509 FGL 511 (672)
Q Consensus 509 fG~ 511 (672)
|+.
T Consensus 153 g~G 155 (210)
T PRK10345 153 NIG 155 (210)
T ss_pred CCC
Confidence 543
No 422
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.78 E-value=2.9e-19 Score=177.91 Aligned_cols=230 Identities=22% Similarity=0.347 Sum_probs=145.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccC---CcchHHHHHHHHHHHcCCCC----------CceeeeEEEEEcC--
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA---SIGGKREFEQHMEVLGRLRH----------PNLVGLKAYYFAR-- 428 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h----------~niv~l~~~~~~~-- 428 (672)
++.||.|+++.||.++.. +|+.+|||++.-. .....+++++|.-....+.+ -.++-.++...-.
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 367999999999999965 5899999987532 22345667777655544322 1222222222211
Q ss_pred ----------C-----eEEEEEeecCCCChhHHhhc---CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecC
Q 005880 429 ----------E-----EKLLVSEYMPNGSLFWLLHG---NRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGN 490 (672)
Q Consensus 429 ----------~-----~~~lv~e~~~~g~L~~~l~~---~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~D 490 (672)
. ..+++|+-+ .+||.+++.. ... ....+....++.+..|+++.+++|| +.|++|+|
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~-~~~~l~~~arl~lT~Q~I~lvA~Lh----~~GlVHgd 170 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQ-THSPLAFAARLSLTVQMIRLVANLH----SYGLVHGD 170 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTT-TSHHHHHHHHHHHHHHHHHHHHHHH----HTTEEEST
T ss_pred CcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhccc-ccchhHHHHHHHHHHHHHHHHHHHh----hcceEecc
Confidence 1 236788888 6688887642 111 1223556677888899999999999 78999999
Q ss_pred CCCCCEEeCCCCcEEEeccCCCccCCCCC--CCCCCcccCCCccccC------CCCCCchhHHHHHHHHHHHHHhCCCCC
Q 005880 491 IKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSD------GRKQSQKSDVYSFGVLLLELLTGKCPS 562 (672)
Q Consensus 491 lkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~t~~y~aPE~l~~~------~~~~~~~~DV~S~Gvvl~el~tg~~P~ 562 (672)
|||+|++++++|.++|+||+......... ...+..|.+||..... ...++.+.|.|++|+++|.|++|+.||
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf 250 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPF 250 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-ST
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCC
Confidence 99999999999999999998776554432 2334679999965332 235788999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCC
Q 005880 563 VIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQR 628 (672)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~R 628 (672)
........ ..| ...... +..+.+..||..+|+.+|++|
T Consensus 251 ~~~~~~~~---------~~~----------------~f~~C~---~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 251 GLSSPEAD---------PEW----------------DFSRCR---DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CCCGGGST---------SGG----------------GGTTSS------HHHHHHHHHHT-SSGGGS
T ss_pred CCCCcccc---------ccc----------------cchhcC---CcCHHHHHHHHHHccCCcccC
Confidence 75432210 000 111222 344457778889999999988
No 423
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.77 E-value=2.5e-18 Score=170.76 Aligned_cols=193 Identities=20% Similarity=0.273 Sum_probs=138.8
Q ss_pred CCCceeeeEEEEEcC---------------------------CeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHH
Q 005880 414 RHPNLVGLKAYYFAR---------------------------EEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466 (672)
Q Consensus 414 ~h~niv~l~~~~~~~---------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i 466 (672)
+|||||++.++|.+. ...|+||..++. +|.+++..+. .+.....-|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~------~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH------RSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC------CchHHHHHH
Confidence 699999999887643 235899998854 9999997543 566777889
Q ss_pred HHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe--CCCC--cEEEeccCCCccCCC--------C---CCCCCCcccCCCc
Q 005880 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL--DKTG--NARVSDFGLSIFAPP--------S---TVPRSNGYRAPEL 531 (672)
Q Consensus 467 ~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll--~~~~--~~kl~DfG~a~~~~~--------~---~~~~t~~y~aPE~ 531 (672)
+.|+++|+.||| +++|.|||+|++|||+ |+|+ ...|+|||++-.... + ...|...-||||+
T Consensus 347 laQlLEav~hL~----~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi 422 (598)
T KOG4158|consen 347 LAQLLEAVTHLH----KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEI 422 (598)
T ss_pred HHHHHHHHHHHH----HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhh
Confidence 999999999999 8999999999999998 3444 478999998743222 1 3345667899998
Q ss_pred cccCCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChH
Q 005880 532 SSSDGRK----QSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIE 607 (672)
Q Consensus 532 l~~~~~~----~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (672)
.....+. .-.|+|.|+.|.+.||+++..-||...++.. .+... +++.....+ .+
T Consensus 423 ~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~-------L~~r~-----Yqe~qLPal----------p~ 480 (598)
T KOG4158|consen 423 ATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML-------LDTRT-----YQESQLPAL----------PS 480 (598)
T ss_pred hhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe-------echhh-----hhhhhCCCC----------cc
Confidence 7543222 2358999999999999999999998643211 11111 112111111 12
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 005880 608 EEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639 (672)
Q Consensus 608 ~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 639 (672)
.....+.+++...++.||.+|++..-..+.|.
T Consensus 481 ~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 481 RVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred cCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 23445778888999999999999887777664
No 424
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.76 E-value=1e-19 Score=191.91 Aligned_cols=185 Identities=31% Similarity=0.408 Sum_probs=155.6
Q ss_pred ccCcCCeEEEEEEE----EcCCcEEEEEEcccCCcch--HHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEEEEeecC
Q 005880 367 MLGKGGFGTAYKAV----LDDGSVVAVKRLKDASIGG--KREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~----~~~g~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+|+|.||.|++++ .+.|..+|+|.+++..... ......|..++...+ ||.+|++...+..+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999876 2347889999887654321 224456777888886 9999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|...+.... .+++.....+...+|-+++++| +.+|+|||+|++||+++.+|++++.|||+++..-..
T Consensus 81 gg~lft~l~~~~-----~f~~~~~~~~~aelaLald~lh----~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~ 151 (612)
T KOG0603|consen 81 GGDLFTRLSKEV-----MFDELDVAFYLAELALALDHLH----KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK 151 (612)
T ss_pred cchhhhccccCC-----chHHHHHHHHHHHHHHHHhhcc----hhHHHHhcccccceeecccCccccCCchhhhHhHhhh
Confidence 999998887543 4777777888889999999999 899999999999999999999999999999866443
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
..+||..|||||++. ....++|.||||++++||+||..||..
T Consensus 152 ~~cgt~eymApEI~~----gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 152 IACGTYEYRAPEIIN----GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hcccchhhhhhHhhh----ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 347899999999874 456789999999999999999999963
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=2.5e-17 Score=161.37 Aligned_cols=134 Identities=21% Similarity=0.368 Sum_probs=113.7
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc--------hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG--------GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
+.||+|++|.||+|.. +|..|+||+....... ....+.+|++++..++|+++.....++.+.+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4689999999999987 5778999986543221 124678899999999999998888887778888999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
+++++|.+++.... + .+..++.+++.+|.++| +.+++|||++|+||+++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~~--------~-~~~~i~~~i~~~l~~lH----~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG--------M-EELELSREIGRLVGKLH----SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc--------H-HHHHHHHHHHHHHHHHH----hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986421 2 88899999999999999 88999999999999999 78999999998754
No 426
>smart00090 RIO RIO-like kinase.
Probab=99.73 E-value=2.2e-17 Score=163.47 Aligned_cols=139 Identities=18% Similarity=0.209 Sum_probs=107.5
Q ss_pred HHhcccCcCCeEEEEEEE--EcCCcEEEEEEcccCCcc------------------------hHHHHHHHHHHHcCCCCC
Q 005880 363 ASAEMLGKGGFGTAYKAV--LDDGSVVAVKRLKDASIG------------------------GKREFEQHMEVLGRLRHP 416 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~--~~~g~~vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~h~ 416 (672)
.+.+.||+|+||.||+|. ..+|+.||||+++..... ....+.+|++.+.++.+.
T Consensus 31 ~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~ 110 (237)
T smart00090 31 AIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEA 110 (237)
T ss_pred HhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 356789999999999998 568999999998743210 012357899999999753
Q ss_pred c--eeeeEEEEEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC-cEecCCCC
Q 005880 417 N--LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK-LTHGNIKS 493 (672)
Q Consensus 417 n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~-iiH~Dlkp 493 (672)
. +.+++++ ...++||||+++++|....... ......+...++.|++.++++|| ..+ |+||||||
T Consensus 111 ~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH----~~g~iiH~Dikp 177 (237)
T smart00090 111 GVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-----VEPEEEEEFELYDDILEEMRKLY----KEGELVHGDLSE 177 (237)
T ss_pred CCCCCeeeEe----cCceEEEEEecCCccccccccc-----CCcchHHHHHHHHHHHHHHHHHH----hcCCEEeCCCCh
Confidence 3 3444433 2358999999998887654222 23556667899999999999999 788 99999999
Q ss_pred CCEEeCCCCcEEEeccCCCccC
Q 005880 494 TNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 494 ~NIll~~~~~~kl~DfG~a~~~ 515 (672)
+||+++ +++++|+|||.+...
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhcc
Confidence 999999 889999999987643
No 427
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.73 E-value=2e-17 Score=160.44 Aligned_cols=131 Identities=18% Similarity=0.307 Sum_probs=107.7
Q ss_pred ccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc--------hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 367 MLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG--------GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.||+|+||.||+|.+ +|..|++|........ ...++.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999995 4788999986532211 1356788999999999888766666666677789999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
++++|.+++.... . .++.+++++|.+|| +.+++|||++|+||+++ ++.+++.|||++...
T Consensus 80 ~g~~l~~~~~~~~------~------~~~~~i~~~l~~lH----~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGN------D------ELLREIGRLVGKLH----KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcH------H------HHHHHHHHHHHHHH----HCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999998875321 0 78999999999999 88999999999999999 889999999998653
No 428
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=8.7e-18 Score=189.72 Aligned_cols=186 Identities=26% Similarity=0.405 Sum_probs=146.8
Q ss_pred HHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCC---CCceeeeEEEEEcCCeEEEEEeecC
Q 005880 363 ASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR---HPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.+.+|+|+||+||+|...+|+.||+|+=+....- +|.--.+++.+|+ -+-|..+...+...+..+||+||.+
T Consensus 701 ~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~ 777 (974)
T KOG1166|consen 701 CISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSP 777 (974)
T ss_pred EEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccc
Confidence 345789999999999999888999999987754321 1111122333443 2345566666667788899999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC-------CCCcEEEeccCCC
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD-------KTGNARVSDFGLS 512 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~-------~~~~~kl~DfG~a 512 (672)
.|+|.+++... ..++|...+.++.|+++-+++|| ..+||||||||+|.||. +...++|+|||.+
T Consensus 778 ~Gtlld~~N~~-----~~m~e~lv~~~~~qml~ive~lH----~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~s 848 (974)
T KOG1166|consen 778 YGTLLDLINTN-----KVMDEYLVMFFSCQMLRIVEHLH----AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRS 848 (974)
T ss_pred cccHHHhhccC-----CCCCchhhhHHHHHHHHHHHHHH----hcceecccCCcceeEeecccCCCCcccceEEEecccc
Confidence 99999999844 35899999999999999999999 88999999999999994 2335899999998
Q ss_pred ccCCC---C----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 005880 513 IFAPP---S----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPS 562 (672)
Q Consensus 513 ~~~~~---~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~ 562 (672)
..+.. . ....|-++--+| +..|+.++..+|-|.++.+++-|+.|+..-
T Consensus 849 iDm~lfp~~~~F~~~~~td~f~C~E--M~~grpWtYq~DyfGlAa~~h~mLFG~y~q 903 (974)
T KOG1166|consen 849 IDMKLFPDGTKFKAVWHTDLFDCIE--MREGRPWTYQIDYFGLAATVHVMLFGKYME 903 (974)
T ss_pred eeeeEcCCCcEEeeeeccccchhHH--HhcCCCCchhhhhHHHHHHHHHHHHHHHHH
Confidence 65432 2 344567788899 556899999999999999999999998653
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=8.1e-17 Score=155.95 Aligned_cols=136 Identities=15% Similarity=0.185 Sum_probs=106.7
Q ss_pred HHHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc----------------------hHHHHHHHHHHHcCCCCCc--
Q 005880 362 RASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG----------------------GKREFEQHMEVLGRLRHPN-- 417 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~----------------------~~~~~~~e~~~l~~l~h~n-- 417 (672)
+...+.||+|+||.||++...+|+.||||+++..... ....+.+|+.++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 3445789999999999999888999999987532200 1123677888898888774
Q ss_pred eeeeEEEEEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEE
Q 005880 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVL 497 (672)
Q Consensus 418 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIl 497 (672)
+...++ ....++||||+++++|..+... .....++.++++++.++| ..+|+||||||+||+
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh----~~gi~H~Dl~p~Nil 157 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAY----KHGIIHGDLSEFNIL 157 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHH----HCCCCcCCCCcccEE
Confidence 444443 2455899999999998765421 234678899999999999 789999999999999
Q ss_pred eCCCCcEEEeccCCCccCC
Q 005880 498 LDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 498 l~~~~~~kl~DfG~a~~~~ 516 (672)
+++++.++|+|||.+....
T Consensus 158 l~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 158 VDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred EcCCCcEEEEECCccccCC
Confidence 9999999999999986543
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=1.2e-16 Score=178.13 Aligned_cols=131 Identities=19% Similarity=0.287 Sum_probs=108.1
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEE-cccC-Cc------chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKR-LKDA-SI------GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~-~~~~-~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
.+.||+|+||.||+|.+.+.. +++|+ +.+. .. ...+.+.+|++++.+++|++++....++.+....++|||
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E 416 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVME 416 (535)
T ss_pred cceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEE
Confidence 478999999999999976444 33433 2221 11 123568899999999999999988888888788899999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
|+++++|.+++. ....++.+++++|.||| +.+++||||||+||++ +++.++|+|||+++.
T Consensus 417 ~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH----~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 417 YIGGKDLKDVLE-------------GNPELVRKVGEIVAKLH----KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred ecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHH----hCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 999999998874 35678999999999999 8899999999999999 678999999999865
No 431
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.63 E-value=5.4e-18 Score=149.88 Aligned_cols=143 Identities=28% Similarity=0.375 Sum_probs=130.9
Q ss_pred CCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 64 QNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
..+++.|.|++|.|+..+|.+..|.+|+.|++++|+|+..+++++.|++|+.|+++-|++. .+|..||.++.|+.|||+
T Consensus 32 ~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldlt 110 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLT 110 (264)
T ss_pred hhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhcc
Confidence 3678999999999999999999999999999999999998889999999999999999999 999999999999999999
Q ss_pred cCcccc-ccchhhcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcc
Q 005880 144 FNNFSG-QIPLTVNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSA 208 (672)
Q Consensus 144 ~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~ 208 (672)
+|+++. .+|..|..++.|+.|+|+.|.|.- |...+.+++|+.|.+.+|.+- ++|..++.+..+.
T Consensus 111 ynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lr 176 (264)
T KOG0617|consen 111 YNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLR 176 (264)
T ss_pred ccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHH
Confidence 999973 579999999999999999999987 666789999999999999998 8998887766554
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.61 E-value=2.5e-15 Score=144.14 Aligned_cols=136 Identities=21% Similarity=0.255 Sum_probs=97.5
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc--hHHH----------------------HHHHHHHHcCCCCCc--e
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG--GKRE----------------------FEQHMEVLGRLRHPN--L 418 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~~~~----------------------~~~e~~~l~~l~h~n--i 418 (672)
.+.||+|+||.||+|...+|+.||||+++..... .... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 3579999999999999888999999998753221 1111 134555555554332 4
Q ss_pred eeeEEEEEcCCeEEEEEeecCCCChhH-HhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CCcEecCCCCCCE
Q 005880 419 VGLKAYYFAREEKLLVSEYMPNGSLFW-LLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS-LKLTHGNIKSTNV 496 (672)
Q Consensus 419 v~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~~iiH~Dlkp~NI 496 (672)
.+.+++ ...++||||++++++.. .+.... .. .....++.+++.++.++| . .+|+||||||+||
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~------~~-~~~~~~~~~~~~~l~~lh----~~~~ivH~Dl~p~Ni 146 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR------LL-EDPEELYDQILELMRKLY----REAGLVHGDLSEYNI 146 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh------hc-ccHHHHHHHHHHHHHHHh----hccCcCcCCCChhhE
Confidence 444433 24589999999865422 121110 11 567889999999999999 6 8999999999999
Q ss_pred EeCCCCcEEEeccCCCccCC
Q 005880 497 LLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 497 ll~~~~~~kl~DfG~a~~~~ 516 (672)
+++ ++.++|+|||.+....
T Consensus 147 li~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 147 LVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred EEE-CCcEEEEECccccccc
Confidence 999 8999999999986443
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=3.1e-15 Score=137.79 Aligned_cols=134 Identities=19% Similarity=0.152 Sum_probs=112.2
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCC--CceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRH--PNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
+.||+|.++.||++...+ ..+++|....... ...+.+|+.++..++| .++.+++++....+..++++||++++.+
T Consensus 4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred eecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 568999999999999864 7899999865443 5678999999999976 5899999888877889999999988766
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
..+ +......++.+++++|+++|... ..+++|||++|+||++++.+.+++.|||.+...
T Consensus 81 ~~~------------~~~~~~~~~~~~~~~l~~lh~~~-~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 81 DEV------------SEEEKEDIAEQLAELLAKLHQLP-LLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ccC------------CHHHHHHHHHHHHHHHHHHhCCC-ceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 433 45677889999999999999332 257999999999999999899999999987643
No 434
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.60 E-value=2.5e-16 Score=163.47 Aligned_cols=117 Identities=23% Similarity=0.336 Sum_probs=101.0
Q ss_pred eEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEecc
Q 005880 430 EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDF 509 (672)
Q Consensus 430 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 509 (672)
..|+.|++|...+|.++|.+.+. ....++.....++.|++.|+.| .+.+|||+||.||+...+..+||+||
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~--~e~~s~s~~~~~~~q~~~~~~y-------k~~ihrdlkp~nif~~~d~q~kIgDF 400 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT--GEERSLSLMLDIFKQIAPAVEY-------KGLIHRDLKPSNIFFSDDDQLKIGDF 400 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc--ccccchhHHHHHHHhhccchhh-------ccchhhhccccccccccchhhhhhhh
Confidence 46799999999999999976542 2457889999999999999998 48899999999999999999999999
Q ss_pred CCCccCCCC-----------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh
Q 005880 510 GLSIFAPPS-----------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557 (672)
Q Consensus 510 G~a~~~~~~-----------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t 557 (672)
|+....... ...+|..||+||.+ .+..|+.|+||||+|++|+|+++
T Consensus 401 gl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi--~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 401 GLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQI--RGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hheeecccCCcccchhhhhhhcccccccCCHHHH--hhhhhhhhcchhhHHHHHHHHHH
Confidence 998655432 35678899999965 47799999999999999999998
No 435
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.60 E-value=8.7e-15 Score=145.23 Aligned_cols=137 Identities=20% Similarity=0.231 Sum_probs=106.4
Q ss_pred HHhcccC-cCCeEEEEEEEEcCCcEEEEEEcccCC-------------cchHHHHHHHHHHHcCCCCCce--eeeEEEEE
Q 005880 363 ASAEMLG-KGGFGTAYKAVLDDGSVVAVKRLKDAS-------------IGGKREFEQHMEVLGRLRHPNL--VGLKAYYF 426 (672)
Q Consensus 363 ~~~~~lg-~G~~g~Vy~~~~~~g~~vavK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~ 426 (672)
.....|| .|+.|+||.+... +..++||++.... ......+.+|++++.+++|++| ++.+++..
T Consensus 34 ~~~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~ 112 (239)
T PRK01723 34 QQARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARV 112 (239)
T ss_pred hcCceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeee
Confidence 3356788 8999999999886 6778999875321 1133567889999999998875 67777654
Q ss_pred cCC----eEEEEEeecCC-CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC
Q 005880 427 ARE----EKLLVSEYMPN-GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT 501 (672)
Q Consensus 427 ~~~----~~~lv~e~~~~-g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~ 501 (672)
.+. ..++||||+++ .+|.+++... +++.. .+.+++++|.+|| +.||+||||||.|||++.+
T Consensus 113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~lH----~~GI~HrDlkp~NILv~~~ 178 (239)
T PRK01723 113 VRHGLFYRADILIERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARFH----DAGVYHADLNAHNILLDPD 178 (239)
T ss_pred eecCcceeeeEEEEecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHHH----HCCCCCCCCCchhEEEcCC
Confidence 322 23599999997 6999888642 24443 3578999999999 8999999999999999999
Q ss_pred CcEEEeccCCCcc
Q 005880 502 GNARVSDFGLSIF 514 (672)
Q Consensus 502 ~~~kl~DfG~a~~ 514 (672)
+.++|+|||.+..
T Consensus 179 ~~v~LIDfg~~~~ 191 (239)
T PRK01723 179 GKFWLIDFDRGEL 191 (239)
T ss_pred CCEEEEECCCccc
Confidence 9999999998764
No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.58 E-value=1.1e-15 Score=169.37 Aligned_cols=203 Identities=21% Similarity=0.306 Sum_probs=134.4
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
+.+.|..|+||.||..+.+ ..+.+|+|+-+ ... +.+- ++.....|.+| |+
T Consensus 87 ~IklisngAygavylvrh~~trqrfa~kiNk-q~l-----ilRn--ilt~a~npfvv---------------------gD 137 (1205)
T KOG0606|consen 87 TIKLISNGAYGAVYLVRHKETRQRFAMKINK-QNL-----ILRN--ILTFAGNPFVV---------------------GD 137 (1205)
T ss_pred eeEeeccCCCCceeeeeccccccchhhcccc-cch-----hhhc--cccccCCccee---------------------ch
Confidence 3478999999999999865 46788885432 221 1110 22222333333 33
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC------
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP------ 516 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~------ 516 (672)
=...++... +++. +++.+++||| +.+|+|||+||+|.+|+.-|++|+.|||+.+..-
T Consensus 138 c~tllk~~g-----~lPv--------dmvla~Eylh----~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 138 CATLLKNIG-----PLPV--------DMVLAVEYLH----SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred hhhhcccCC-----CCcc--------hhhHHhHhhc----cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 344443221 1221 2278899999 8999999999999999999999999999875321
Q ss_pred --------------CCCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHH
Q 005880 517 --------------PSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRW 582 (672)
Q Consensus 517 --------------~~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 582 (672)
....++|+.|+|||++. ...|+..+|.|++|+|+||.+-|..||+++..++ .
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVil--rqgygkpvdwwamGiIlyeFLVgcvpffGdtpee------------l 266 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVIL--RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE------------L 266 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhh--hhccCCCccHHHHHHHHHHHheeeeeccCCCHHH------------H
Confidence 12457899999999875 4578999999999999999999999998764332 2
Q ss_pred HHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 005880 583 VQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVV 635 (672)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 635 (672)
+..++...... ....+....+..+++.+.|+.+|.+|--....+
T Consensus 267 fg~visd~i~w---------pE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~ 310 (1205)
T KOG0606|consen 267 FGQVISDDIEW---------PEEDEALPPEAQDLIEQLLRQNPLCRLGTGGAL 310 (1205)
T ss_pred Hhhhhhhhccc---------cccCcCCCHHHHHHHHHHHHhChHhhcccchhh
Confidence 22222222110 001122233456677789999999996443333
No 437
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.54 E-value=3.3e-16 Score=138.67 Aligned_cols=128 Identities=23% Similarity=0.375 Sum_probs=118.8
Q ss_pred CCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCcc
Q 005880 82 QPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHL 161 (672)
Q Consensus 82 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L 161 (672)
+.+.++.+++.|-||+|+++..+|.+..|.+|+.|++++|+++ .+|.++++|++|+.|+++-|++. .+|..|+.++.|
T Consensus 27 ~gLf~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 27 PGLFNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred ccccchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 4477889999999999999999999999999999999999999 99999999999999999999999 899999999999
Q ss_pred CeeeccCCcccC-cC--CCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcccccc
Q 005880 162 LTLKLEANRFSG-PI--TGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFTQN 212 (672)
Q Consensus 162 ~~L~l~~N~l~~-~~--~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~~n 212 (672)
+.|||..|+++. .. .++.+..|..|+|++|.|. .+|..+++++.++.+++
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~l 157 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSL 157 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEee
Confidence 999999999987 33 4677889999999999999 99999999999988754
No 438
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.52 E-value=7.5e-16 Score=160.78 Aligned_cols=140 Identities=29% Similarity=0.399 Sum_probs=113.1
Q ss_pred cEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccC--------------------
Q 005880 66 RVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFN-------------------- 124 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~-------------------- 124 (672)
+...|+|++|+|..++.+ +.+|+.|-+||||+|++...+|.+..|.+|++|+|++|.|.
T Consensus 127 n~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~ 206 (1255)
T KOG0444|consen 127 NSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSN 206 (1255)
T ss_pred CcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhccc
Confidence 455677777777766655 67888888889999988888888888888888888888654
Q ss_pred -----CCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCC
Q 005880 125 -----GEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 125 -----g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p 198 (672)
..+|.++..|.+|..+|||.|++. .+|..+.++.+|+.|+||+|+|+. ........+|++|+||.|+|+ .+|
T Consensus 207 TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP 284 (1255)
T KOG0444|consen 207 TQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLP 284 (1255)
T ss_pred ccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cch
Confidence 257888888999999999999998 899999999999999999999987 445556677888888888888 777
Q ss_pred CcCCCCCCc
Q 005880 199 KSLSGFPDS 207 (672)
Q Consensus 199 ~~l~~~~~~ 207 (672)
+.+.+++.+
T Consensus 285 ~avcKL~kL 293 (1255)
T KOG0444|consen 285 DAVCKLTKL 293 (1255)
T ss_pred HHHhhhHHH
Confidence 776666543
No 439
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.47 E-value=9.2e-15 Score=151.98 Aligned_cols=139 Identities=31% Similarity=0.286 Sum_probs=103.3
Q ss_pred ceEEcCCcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCC
Q 005880 59 GVSCLQNRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFR 136 (672)
Q Consensus 59 gv~c~~~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 136 (672)
|+.-....+.+|+|+.|+++..-.. +.+|+.|+.|+||+|.|..+-+ ++...++|++|+|++|+|+..-+.+|..|..
T Consensus 263 G~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~ 342 (873)
T KOG4194|consen 263 GAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQ 342 (873)
T ss_pred cceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHH
Confidence 4444446788999999999877666 7888999999999999987666 7778888999999999988666677777778
Q ss_pred CCeEecccCccccccchhhcCCCccCeeeccCCcccCcC-----CCCCCCCCCeeeccCCcCCCCCC
Q 005880 137 LYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPI-----TGLDLRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 137 L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-----~~~~l~~L~~l~l~~N~l~g~~p 198 (672)
|++|+|++|.++..--..|..+++|++|||++|.|++.+ ++..|++|+.|+|.+|+|. .||
T Consensus 343 Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk-~I~ 408 (873)
T KOG4194|consen 343 LEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK-SIP 408 (873)
T ss_pred hhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceee-ecc
Confidence 888888888777444456777777777777777776633 2335666666666666666 455
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.47 E-value=2e-13 Score=147.32 Aligned_cols=141 Identities=21% Similarity=0.210 Sum_probs=99.7
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcch----------------------------------------HHHHHH
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGG----------------------------------------KREFEQ 405 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~----------------------------------------~~~~~~ 405 (672)
+.||+|++|.||+|++++|+.||||+.+...... +-+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 4699999999999999999999999986432100 012445
Q ss_pred HHHHHcCC----CCCceeeeEEEE-EcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHH-HHHHHHh
Q 005880 406 HMEVLGRL----RHPNLVGLKAYY-FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR-GLAFIHF 479 (672)
Q Consensus 406 e~~~l~~l----~h~niv~l~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~-~L~~LH~ 479 (672)
|.+.+.++ +|.+-+.+-.++ ......++||||++|++|.++...... .. .+.+++..+++ .+..+|
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~----~~---~~~~ia~~~~~~~l~ql~- 274 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA----GL---DRKALAENLARSFLNQVL- 274 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc----CC---CHHHHHHHHHHHHHHHHH-
Confidence 55555444 233323332233 234567999999999999887653211 12 24456666666 467788
Q ss_pred hCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 480 ~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
..|++|+|++|.||+++++++++++|||++....+
T Consensus 275 ---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 275 ---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred ---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 78999999999999999999999999999876653
No 441
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.46 E-value=5.6e-14 Score=137.06 Aligned_cols=150 Identities=24% Similarity=0.403 Sum_probs=115.8
Q ss_pred HHHHcCCCCCceeeeEEEEEcCC-----eEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC
Q 005880 407 MEVLGRLRHPNLVGLKAYYFARE-----EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481 (672)
Q Consensus 407 ~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ 481 (672)
+.-+-.+.|.|||+++.|+.+.. +..+++|||+.|++..+|++.+.. ...+......+|+.||..||.|||..
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~-~~a~~~~~wkkw~tqIlsal~yLhs~- 195 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN-QKALFQKAWKKWCTQILSALSYLHSC- 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh-hhhhhHHHHHHHHHHHHhhhhhhhcc-
Confidence 33455567999999999986543 467899999999999999876532 34577788899999999999999954
Q ss_pred CCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc---------CCCCCCCCCCcccCCCccccCCCCCCchhHHHHHHHHH
Q 005880 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF---------APPSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLL 552 (672)
Q Consensus 482 ~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~---------~~~~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl 552 (672)
+++|+|+++.-+-|++..++-+|++----... .......+-++|.||| +......+.++|||+||...
T Consensus 196 -~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~--sg~~tn~~~a~dIy~fgmcA 272 (458)
T KOG1266|consen 196 -DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPE--SGTTTNTTGASDIYKFGMCA 272 (458)
T ss_pred -CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCC--cCcccccccchhhhhhhHHH
Confidence 68999999999999999998888753211110 0111223457899999 66666777899999999999
Q ss_pred HHHHhCCCC
Q 005880 553 LELLTGKCP 561 (672)
Q Consensus 553 ~el~tg~~P 561 (672)
+||.-+..-
T Consensus 273 lemailEiq 281 (458)
T KOG1266|consen 273 LEMAILEIQ 281 (458)
T ss_pred HHHHHheec
Confidence 999987654
No 442
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=6.8e-15 Score=163.51 Aligned_cols=243 Identities=23% Similarity=0.329 Sum_probs=177.3
Q ss_pred cccCcCCeEEEEEEEEc--CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD--DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|.|+.|-..... ....+|+|.+.... .........|..+-..+. |+|++++++...+.+..+++++|..+
T Consensus 26 ~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g 105 (601)
T KOG0590|consen 26 RSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDG 105 (601)
T ss_pred ccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcccc
Confidence 45899999999988853 34567777765443 223344455777767776 99999999999999999999999999
Q ss_pred CChhHHh-hcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC-cEEEeccCCCccCCC-
Q 005880 441 GSLFWLL-HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG-NARVSDFGLSIFAPP- 517 (672)
Q Consensus 441 g~L~~~l-~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~-~~kl~DfG~a~~~~~- 517 (672)
|++.+.+ +... ...+....-.++.|+..++.|+|. ..++.|||+||+|.+++..+ ..+++|||+|.....
T Consensus 106 ~~~f~~i~~~~~----~~~~~~~~~~~~~ql~s~l~~~H~---~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 106 GSLFSKISHPDS----TGTSSSSASRYLPQLNSGLSYLHP---ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred cccccccccCCc----cCCCCcchhhhhhhhccCccccCc---ccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 9999888 4322 235556677889999999999993 46899999999999999999 999999999976655
Q ss_pred C-------CCCC-CCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 518 S-------TVPR-SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 518 ~-------~~~~-t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
. ...| +..|+|||..... ....+..|+||.|+++.-+++|..|+....... .....|......
T Consensus 179 ~g~~~~~~~~~g~s~~y~a~E~~~~~-~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-------~~~~~~~~~~~~- 249 (601)
T KOG0590|consen 179 NGAERSLKDRCGSSPPYGAPEHLSGK-AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-------GRYSSWKSNKGR- 249 (601)
T ss_pred CCcceeeecccCCCCCCCCcccccch-hhcCCCcccccccccccccccCCCCcccccccc-------ccceeecccccc-
Confidence 2 4456 8899999976532 355788999999999999999999997654322 122222211100
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVV 635 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 635 (672)
+ ....+.. ......++..+++..+|..|.+.+++.
T Consensus 250 ------~--~~~~~~~---~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 250 ------F--TQLPWNS---ISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ------c--ccCcccc---CChhhhhcccccccCCchhcccccccc
Confidence 0 0011111 122345666688889999999988774
No 443
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.46 E-value=1.6e-15 Score=151.20 Aligned_cols=139 Identities=28% Similarity=0.394 Sum_probs=109.7
Q ss_pred EeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCc
Q 005880 67 VSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNN 146 (672)
Q Consensus 67 v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 146 (672)
++.|++.+|.+...++..-+++.|+.||...|.++..+|.++.|.+|.-|||.+|++. .+| +|+++..|++|+++.|+
T Consensus 162 l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~ 239 (565)
T KOG0472|consen 162 LSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQ 239 (565)
T ss_pred HHHhhccccchhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccH
Confidence 3445555555555555544467777777777777777778888888888888888888 777 78888888888888888
Q ss_pred cccccchhhc-CCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcccc
Q 005880 147 FSGQIPLTVN-HLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFT 210 (672)
Q Consensus 147 l~g~~p~~~~-~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~ 210 (672)
|. .+|++.. ++.+|..|||..|++.. |.....+++|+.||+|+|.++ .+|.+++++ .+.|.
T Consensus 240 i~-~lpae~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L 302 (565)
T KOG0472|consen 240 IE-MLPAEHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFL 302 (565)
T ss_pred HH-hhHHHHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeeh
Confidence 88 7888776 89999999999999988 777788999999999999999 789888887 55544
No 444
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.46 E-value=5.2e-14 Score=140.36 Aligned_cols=157 Identities=20% Similarity=0.241 Sum_probs=121.8
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccc-cccCC----------------
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSH-NNFNG---------------- 125 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~-N~l~g---------------- 125 (672)
...+.|+|+.|+|+.+++. |+.+++|+.||||+|+|+.+-| .|..|.+|..|-+-+ |+|+.
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 3567899999999998887 9999999999999999998777 676666665555444 55541
Q ss_pred --------------------------------------------------------------------------------
Q 005880 126 -------------------------------------------------------------------------------- 125 (672)
Q Consensus 126 -------------------------------------------------------------------------------- 125 (672)
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence
Q ss_pred -------------------------------------CCC-hhhhccCCCCeEecccCccccccchhhcCCCccCeeecc
Q 005880 126 -------------------------------------EFP-DSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLE 167 (672)
Q Consensus 126 -------------------------------------~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 167 (672)
.-| .-|..|++|+.|+|++|+|++.-+..|..+..|++|+|.
T Consensus 227 ~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~ 306 (498)
T KOG4237|consen 227 SPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLT 306 (498)
T ss_pred chHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcC
Confidence 001 124567888888888888887777788888888888888
Q ss_pred CCcccC--cCCCCCCCCCCeeeccCCcCCCCCCCcCC---CCCCccccccccccCCCCc
Q 005880 168 ANRFSG--PITGLDLRNLQDFNVSGNHLSGQIPKSLS---GFPDSAFTQNAALCGSPMQ 221 (672)
Q Consensus 168 ~N~l~~--~~~~~~l~~L~~l~l~~N~l~g~~p~~l~---~~~~~~~~~n~~lc~~~~~ 221 (672)
.|+|.. .-.+.++.+|+.|+|.+|+|+..-|..|. .+..+.+..||+.|+|-+.
T Consensus 307 ~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~ 365 (498)
T KOG4237|consen 307 RNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLA 365 (498)
T ss_pred cchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchH
Confidence 888765 33355789999999999999988886665 4556677899999999765
No 445
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.41 E-value=2.1e-14 Score=149.32 Aligned_cols=157 Identities=23% Similarity=0.274 Sum_probs=133.6
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
..+..|+|+.|.|..+-.. .....+|++|+|++|+|+...+ +|..|..|+.|+|++|+++..--..|..+++|+.|||
T Consensus 293 t~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdL 372 (873)
T KOG4194|consen 293 TSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDL 372 (873)
T ss_pred chhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcC
Confidence 4677899999999876544 6777899999999999999888 8999999999999999999666667889999999999
Q ss_pred ccCccccccch---hhcCCCccCeeeccCCcccC--cCCCCCCCCCCeeeccCCcCCCCCCCcCCCC--CCccccccccc
Q 005880 143 SFNNFSGQIPL---TVNHLTHLLTLKLEANRFSG--PITGLDLRNLQDFNVSGNHLSGQIPKSLSGF--PDSAFTQNAAL 215 (672)
Q Consensus 143 ~~N~l~g~~p~---~~~~l~~L~~L~l~~N~l~~--~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~--~~~~~~~n~~l 215 (672)
++|.|++.|.. .|..|++|+.|+|.+|+|.. .-.+..+.+|++|||.+|.|...-|+.|..+ ..|.+..-..+
T Consensus 373 r~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssfl 452 (873)
T KOG4194|consen 373 RSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFL 452 (873)
T ss_pred cCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceE
Confidence 99999988854 58889999999999999987 3346799999999999999997777777654 44555555689
Q ss_pred cCCCCc
Q 005880 216 CGSPMQ 221 (672)
Q Consensus 216 c~~~~~ 221 (672)
|+|.+.
T Consensus 453 CDCql~ 458 (873)
T KOG4194|consen 453 CDCQLK 458 (873)
T ss_pred EeccHH
Confidence 998753
No 446
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.39 E-value=2.1e-14 Score=150.19 Aligned_cols=153 Identities=25% Similarity=0.308 Sum_probs=133.5
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.++..+||+.|+|.-.+.-+-++.+|+.|+||+|+|+..--..+...+|++|+||+|+|+ .+|+.+.+|++|+.|.+.+
T Consensus 222 ~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~ 300 (1255)
T KOG0444|consen 222 HNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANN 300 (1255)
T ss_pred hhhhhccccccCCCcchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhcc
Confidence 467889999999998877799999999999999999987778888999999999999999 9999999999999999999
Q ss_pred Cccc-cccchhhcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcccc---ccccccCCC
Q 005880 145 NNFS-GQIPLTVNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFT---QNAALCGSP 219 (672)
Q Consensus 145 N~l~-g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~---~n~~lc~~~ 219 (672)
|+++ ..||..|++|.+|+.+..++|+|.- |.....+..|+.|.|+.|.|. ++|+.+--++.+..+ .|+.+--.|
T Consensus 301 NkL~FeGiPSGIGKL~~Levf~aanN~LElVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 301 NKLTFEGIPSGIGKLIQLEVFHAANNKLELVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred CcccccCCccchhhhhhhHHHHhhccccccCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCC
Confidence 9986 3489999999999999999999986 666789999999999999999 899988777765544 566665444
No 447
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.36 E-value=7.8e-13 Score=140.39 Aligned_cols=249 Identities=19% Similarity=0.205 Sum_probs=176.1
Q ss_pred cccCHHHHHHHHhcccCc--CCeEEEEEEEE---cCCcEEEEEEcccCCc--chHHHHHHHHHHHcCC-CCCceeeeEEE
Q 005880 353 KRFELEDLLRASAEMLGK--GGFGTAYKAVL---DDGSVVAVKRLKDASI--GGKREFEQHMEVLGRL-RHPNLVGLKAY 424 (672)
Q Consensus 353 ~~~~~~~l~~~~~~~lg~--G~~g~Vy~~~~---~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~ 424 (672)
..+++.+-...+.+.+|. |.+|.||.+.. .++..+|+|+-+.... .....=.+|+....++ .|+|.++.+..
T Consensus 107 ~~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~ 186 (524)
T KOG0601|consen 107 PFDSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA 186 (524)
T ss_pred CccchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc
Confidence 344555544445678999 99999999986 4688899998442221 2233334566655666 49999998888
Q ss_pred EEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHhhCCCCCcEecCCCCCCEEeCC
Q 005880 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR----GLAFIHFTCKSLKLTHGNIKSTNVLLDK 500 (672)
Q Consensus 425 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~----~L~~LH~~~~~~~iiH~Dlkp~NIll~~ 500 (672)
+...+..++-+|++ +.+|..+.+... ..++....+.+..+..+ ||.++| ..+++|-|+||.||+...
T Consensus 187 ~e~~~~lfiqtE~~-~~sl~~~~~~~~----~~~p~~~l~~~~~~~~~~~~~al~~~h----s~~~~~~~~kp~~i~~~~ 257 (524)
T KOG0601|consen 187 WEGSGILFIQTELC-GESLQSYCHTPC----NFLPDNLLWNSLRDWLSRDVTALSHLH----SNNIVHDDLKPANIFTTS 257 (524)
T ss_pred cccCCcceeeeccc-cchhHHhhhccc----ccCCchhhhhHHhhhhhcccccccccC----CCcccccccchhheeccc
Confidence 89999999999999 468888876443 23566667777777777 999999 889999999999999999
Q ss_pred C-CcEEEeccCCCccCCCCCC----------CCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCC
Q 005880 501 T-GNARVSDFGLSIFAPPSTV----------PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGA 569 (672)
Q Consensus 501 ~-~~~kl~DfG~a~~~~~~~~----------~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~ 569 (672)
+ ...++.|||+...+..... .+...|++||+. ...++.+.|||++|.++.+..++..+......
T Consensus 258 ~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~---~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-- 332 (524)
T KOG0601|consen 258 DWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELL---NGLATFASDIFSLGEVILEAILGSHLPSVGKN-- 332 (524)
T ss_pred ccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhh---ccccchHhhhcchhhhhHhhHhhcccccCCCC--
Confidence 9 8899999999887765421 344569999975 35788999999999999999998777643211
Q ss_pred CCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 570 GMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..|.+ .+... +..+.. +.-..++...+..+++.+|..|++.+.+.+
T Consensus 333 ----------~~W~~--~r~~~----ip~e~~-----~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 333 ----------SSWSQ--LRQGY----IPLEFC-----EGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ----------CCccc--ccccc----Cchhhh-----cCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11211 00000 000111 111123444777899999999999887754
No 448
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.31 E-value=6.8e-12 Score=118.19 Aligned_cols=130 Identities=17% Similarity=0.138 Sum_probs=94.4
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCcee-eeEEEEEcCCeEEEEEeecCCCChh
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLV-GLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
+.++.|.++.||++... |..|++|....... ....+.+|++++..+.+.+++ +++++ .....++||||+++.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCccc
Confidence 56889999999999876 77899998765432 234567889998888665554 34443 234468999999998775
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCC-CCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK-SLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~-~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
+. . .....++.+++++|+.||.... ...++|||++|.||+++ ++.++++|||.+.
T Consensus 80 ~~----~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 80 TE----D---------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cc----c---------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 42 0 0113456789999999993211 12259999999999999 6689999999864
No 449
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.28 E-value=6.9e-11 Score=126.76 Aligned_cols=164 Identities=21% Similarity=0.226 Sum_probs=126.8
Q ss_pred EcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCH
Q 005880 381 LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDW 460 (672)
Q Consensus 381 ~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~ 460 (672)
..++.+|.|+..+...........+-++.|+.+|||||+++++.+...+..|+|+|.+. .|..++.. +..
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~--------l~~ 103 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE--------LGK 103 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH--------hHH
Confidence 44688888888876554345567788899999999999999999999999999999873 46666653 335
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCCC-----CCCCcccCCCccccC
Q 005880 461 TTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV-----PRSNGYRAPELSSSD 535 (672)
Q Consensus 461 ~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~-----~~t~~y~aPE~l~~~ 535 (672)
....-.+.||+.||.|||+ +.+++|++|.-+-|+|++.|+.||++|.++........ .--..|..|+.+.
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~---d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~-- 178 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLND---DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEID-- 178 (690)
T ss_pred HHHHHHHHHHHHHHHHHhc---cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcC--
Confidence 5667788999999999984 46799999999999999999999999988755443321 1123477777332
Q ss_pred CCCCCchhHHHHHHHHHHHHHhCCCC
Q 005880 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561 (672)
Q Consensus 536 ~~~~~~~~DV~S~Gvvl~el~tg~~P 561 (672)
..+-..|.|-|||+++|++.|..+
T Consensus 179 --~s~~s~D~~~Lg~li~el~ng~~~ 202 (690)
T KOG1243|consen 179 --PSEWSIDSWGLGCLIEELFNGSLL 202 (690)
T ss_pred --ccccchhhhhHHHHHHHHhCcccC
Confidence 112457999999999999999433
No 450
>PLN03150 hypothetical protein; Provisional
Probab=99.27 E-value=6.9e-12 Score=141.65 Aligned_cols=108 Identities=37% Similarity=0.580 Sum_probs=95.2
Q ss_pred ccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeecc
Q 005880 112 ALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVS 189 (672)
Q Consensus 112 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~ 189 (672)
.++.|+|++|.++|.+|..+++|++|+.|+|++|+|+|.+|..++++++|+.|+|++|+|+|.++ ...+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999998555 5689999999999
Q ss_pred CCcCCCCCCCcCCCC----CCccccccccccCCC
Q 005880 190 GNHLSGQIPKSLSGF----PDSAFTQNAALCGSP 219 (672)
Q Consensus 190 ~N~l~g~~p~~l~~~----~~~~~~~n~~lc~~~ 219 (672)
+|+|+|.+|..+..+ ..+.+.+|+.+|+.|
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999999877643 356677899999864
No 451
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.27 E-value=4.1e-11 Score=136.07 Aligned_cols=168 Identities=17% Similarity=0.260 Sum_probs=123.6
Q ss_pred cCCChhhHHHHHHHHhcCCCCCCCCC----CCCCCCCCcccc----------------eEEcCC----------------
Q 005880 22 KASTSPDLNALLDFKASSDEANKLTT----WNSTSDPCSWTG----------------VSCLQN---------------- 65 (672)
Q Consensus 22 ~~~~~~d~~all~~k~~~~~~~~~~~----W~~~~~~c~w~g----------------v~c~~~---------------- 65 (672)
...+..+...+++..+.+..++.+.+ |+.++++|.-.+ |.|..+
T Consensus 58 ~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~~~~~ 137 (754)
T PRK15370 58 ETASPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQASSA 137 (754)
T ss_pred CCCCHHHHHHHHHHHHHhcCCchhhccccccCCCCcccccCCcchhhheeeecCCceEEecCCCcccccccccccccccC
Confidence 34566789999999998887777766 988889995433 667322
Q ss_pred -----------------------------------------cEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCC
Q 005880 66 -----------------------------------------RVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPV 104 (672)
Q Consensus 66 -----------------------------------------~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~ 104 (672)
+.+.|+|++++|+..+..+. ++|+.|+|++|+|+..+
T Consensus 138 ~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~LtsLP~~Ip--~~L~~L~Ls~N~LtsLP 215 (754)
T PRK15370 138 SGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTTIPACIP--EQITTLILDNNELKSLP 215 (754)
T ss_pred CCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCcCCcccc--cCCcEEEecCCCCCcCC
Confidence 34567788888876655453 47888999999988765
Q ss_pred CCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCC
Q 005880 105 PSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQ 184 (672)
Q Consensus 105 p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~ 184 (672)
+.+. ++|+.|+|++|+|+ .+|..+.. +|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+. ++..-..+|+
T Consensus 216 ~~l~--~nL~~L~Ls~N~Lt-sLP~~l~~--~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~~sL~ 286 (754)
T PRK15370 216 ENLQ--GNIKTLYANSNQLT-SIPATLPD--TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKISC-LPENLPEELR 286 (754)
T ss_pred hhhc--cCCCEEECCCCccc-cCChhhhc--cccEEECcCCccC-cCChhHh--CCCCEEECcCCccCc-cccccCCCCc
Confidence 5443 58889999999888 67876653 7888888888888 7777764 578888888888885 2222235788
Q ss_pred eeeccCCcCCCCCCCcC
Q 005880 185 DFNVSGNHLSGQIPKSL 201 (672)
Q Consensus 185 ~l~l~~N~l~g~~p~~l 201 (672)
.|+|++|+|+ .+|..+
T Consensus 287 ~L~Ls~N~Lt-~LP~~l 302 (754)
T PRK15370 287 YLSVYDNSIR-TLPAHL 302 (754)
T ss_pred EEECCCCccc-cCcccc
Confidence 8888888888 466543
No 452
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.25 E-value=1e-11 Score=135.39 Aligned_cols=140 Identities=15% Similarity=0.116 Sum_probs=91.6
Q ss_pred cccCcCCeEEEEEEEEcC-CcEEEEEEcccCCcc----------------------------------hH------HHHH
Q 005880 366 EMLGKGGFGTAYKAVLDD-GSVVAVKRLKDASIG----------------------------------GK------REFE 404 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~----------------------------------~~------~~~~ 404 (672)
+.||+|++|.||+|++++ |+.||||+.+..-.. .. -+|.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 479999999999999887 999999998743100 01 1244
Q ss_pred HHHHHHcCC----CCCceeeeEEEEEc-CCeEEEEEeecCCCChhHHh--hcCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 005880 405 QHMEVLGRL----RHPNLVGLKAYYFA-REEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477 (672)
Q Consensus 405 ~e~~~l~~l----~h~niv~l~~~~~~-~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~l~~~~~~~i~~~ia~~L~~L 477 (672)
+|...+.++ .+.+.+.+-.++.+ ....+|||||++|+.+.++- .... .....+.......++.|+
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g-~d~~~la~~~v~~~~~Qi------- 276 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAG-TDMKLLAERGVEVFFTQV------- 276 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcC-CCHHHHHHHHHHHHHHHH-------
Confidence 455444444 24444444444433 45678999999999997742 2111 001112222222233333
Q ss_pred HhhCCCCCcEecCCCCCCEEeCCCC----cEEEeccCCCccCCC
Q 005880 478 HFTCKSLKLTHGNIKSTNVLLDKTG----NARVSDFGLSIFAPP 517 (672)
Q Consensus 478 H~~~~~~~iiH~Dlkp~NIll~~~~----~~kl~DfG~a~~~~~ 517 (672)
+ ..|++|+|++|.||+++.++ ++++.|||++.....
T Consensus 277 f----~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 F----RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred H----hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 2 46999999999999999888 999999999876654
No 453
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.24 E-value=5.6e-12 Score=117.12 Aligned_cols=123 Identities=27% Similarity=0.354 Sum_probs=41.8
Q ss_pred CCCCCCccEEEcccCCCCCCCCCCC-cccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhh-cCCCcc
Q 005880 84 LTSLTQLRVLSLKYNRFTGPVPSLS-NLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTV-NHLTHL 161 (672)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~~~p~~~-~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~-~~l~~L 161 (672)
+.+...++.|+|++|+|+. +..++ .+.+|+.|+|++|.|+ .++ .+..|++|++|++++|+|+ .+...+ ..+++|
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-Ie~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L 90 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-IENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNL 90 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT-
T ss_pred ccccccccccccccccccc-ccchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcC
Confidence 4555567777788777774 44555 4677777888888777 443 4677777888888888887 454444 357778
Q ss_pred CeeeccCCcccCc---CCCCCCCCCCeeeccCCcCCCCCCC----cCCCCCCccccc
Q 005880 162 LTLKLEANRFSGP---ITGLDLRNLQDFNVSGNHLSGQIPK----SLSGFPDSAFTQ 211 (672)
Q Consensus 162 ~~L~l~~N~l~~~---~~~~~l~~L~~l~l~~N~l~g~~p~----~l~~~~~~~~~~ 211 (672)
+.|+|++|+|... .....+++|+.|+|.+|.++ ..+. .+..+|.+.+.+
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~-~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC-EKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG-GSTTHHHHHHHH-TT-SEET
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc-chhhHHHHHHHHcChhheeC
Confidence 8888888877662 23456778888888888877 3332 234566666554
No 454
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.24 E-value=7e-13 Score=132.53 Aligned_cols=132 Identities=27% Similarity=0.358 Sum_probs=121.3
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhh-ccCCCCeEecc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVS-SLFRLYRLDLS 143 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~ 143 (672)
.++.+||...|-|...++.++.+.+|..|+|..|+|.. .|+|+.+..|+.|+++.|+++ .+|.+.+ .|.+|..|||.
T Consensus 183 ~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~~-lPef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLR 260 (565)
T KOG0472|consen 183 KRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIRF-LPEFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLR 260 (565)
T ss_pred HHHHhcccchhhhhcCChhhcchhhhHHHHhhhccccc-CCCCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeecc
Confidence 37889999999999999999999999999999999995 559999999999999999999 8998887 89999999999
Q ss_pred cCccccccchhhcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCcC
Q 005880 144 FNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKSL 201 (672)
Q Consensus 144 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~l 201 (672)
.|+++ ..|.++..+.+|.+||+|+|.|++ |...+++ .|+.|-+.+|.+. +|-.++
T Consensus 261 dNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlr-TiRr~i 316 (565)
T KOG0472|consen 261 DNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLR-TIRREI 316 (565)
T ss_pred ccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCchH-HHHHHH
Confidence 99999 999999999999999999999999 7778888 9999999999987 554444
No 455
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.21 E-value=1.4e-10 Score=109.94 Aligned_cols=136 Identities=14% Similarity=0.153 Sum_probs=97.8
Q ss_pred cccCcCCeEEEEEEEEcC-------CcEEEEEEcccCC----------------------cchHHHHH----HHHHHHcC
Q 005880 366 EMLGKGGFGTAYKAVLDD-------GSVVAVKRLKDAS----------------------IGGKREFE----QHMEVLGR 412 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~~~~~~----------------------~~~~~~~~----~e~~~l~~ 412 (672)
..||.|--+.||.|...+ +..+|||+.+... ....+.+. +|++.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998553 4799999774210 00122333 79999988
Q ss_pred CCC--CceeeeEEEEEcCCeEEEEEeecCCCChh-HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhhCCCCCcEe
Q 005880 413 LRH--PNLVGLKAYYFAREEKLLVSEYMPNGSLF-WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI-HFTCKSLKLTH 488 (672)
Q Consensus 413 l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~~~~~~iiH 488 (672)
+.. -++.+++++ ...++||||+.++.+. ..++. ..++..+...+..+++.+|..| | +.+|||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd------~~~~~~~~~~i~~~i~~~l~~l~H----~~glVH 148 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD------AKLNDEEMKNAYYQVLSMMKQLYK----ECNLVH 148 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc------cccCHHHHHHHHHHHHHHHHHHHH----hCCeec
Confidence 853 455566654 5678999999765442 12221 1244556778889999999999 7 789999
Q ss_pred cCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 489 GNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 489 ~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|||++.||+++ ++.++|+|||.+....
T Consensus 149 GDLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 149 ADLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999999997 4679999999886543
No 456
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.20 E-value=1.5e-12 Score=142.70 Aligned_cols=126 Identities=32% Similarity=0.435 Sum_probs=108.3
Q ss_pred CcEeEEEecCCCcccCC-CCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSL-QPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~-~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
..+..|+|.+|.|+... +.|-+..+|+.|+|++|+|...+. .+.+|..|+.|+||+|+|+ .+|..+.++..|++|..
T Consensus 359 ~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~a 437 (1081)
T KOG0618|consen 359 AALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRA 437 (1081)
T ss_pred HHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhh
Confidence 36778899999998654 558899999999999999996555 7889999999999999999 99999999999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccC-cCCCC-CCCCCCeeeccCCcC
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PITGL-DLRNLQDFNVSGNHL 193 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~-~l~~L~~l~l~~N~l 193 (672)
.+|+|. .+| ++.++++|+.+|++.|+|+. .++.. .-++|++|||++|.-
T Consensus 438 hsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 438 HSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred cCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 999998 788 89999999999999999987 33332 337999999999973
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.19 E-value=5.1e-13 Score=139.12 Aligned_cols=151 Identities=26% Similarity=0.389 Sum_probs=88.6
Q ss_pred EEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccc
Q 005880 69 HLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFS 148 (672)
Q Consensus 69 ~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 148 (672)
.+.|..|.+..+++.+++|..|++|||+.|+++..++.+..|+ |+.|-+++|+++ .+|..++.+..|..||.+.|++.
T Consensus 102 ~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~ 179 (722)
T KOG0532|consen 102 SLILYHNCIRTIPEAICNLEALTFLDLSSNQLSHLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ 179 (722)
T ss_pred HHHHHhccceecchhhhhhhHHHHhhhccchhhcCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh
Confidence 3444444444444445666666666666666665555555544 666666666666 66666665566666666666666
Q ss_pred cccchhhcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcccc--ccccccCCCCcccc
Q 005880 149 GQIPLTVNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFT--QNAALCGSPMQACK 224 (672)
Q Consensus 149 g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~--~n~~lc~~~~~~c~ 224 (672)
.+|..++++.+|+.|.+..|++.. +.....| .|..||+|.|+++ .||-.|.++..|... .|+-|...|.+.|.
T Consensus 180 -slpsql~~l~slr~l~vrRn~l~~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPPAqIC~ 255 (722)
T KOG0532|consen 180 -SLPSQLGYLTSLRDLNVRRNHLEDLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPPAQICE 255 (722)
T ss_pred -hchHHhhhHHHHHHHHHhhhhhhhCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCChHHHHh
Confidence 566666666666666666666655 3333322 4667777777777 677776666665543 23334444444553
No 458
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.18 E-value=1.3e-11 Score=114.76 Aligned_cols=120 Identities=29% Similarity=0.335 Sum_probs=52.8
Q ss_pred cEeEEEecCCCcccCCCCCC-CCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhh-hccCCCCeEecc
Q 005880 66 RVSHLVLENLQLSGSLQPLT-SLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSV-SSLFRLYRLDLS 143 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~-~~l~~L~~L~l~ 143 (672)
++++|+|++|.|+. ++.++ .+.+|+.|||++|+|+. ++.+..+++|+.|+|++|+|+ .+++.+ ..+++|++|+|+
T Consensus 20 ~~~~L~L~~n~I~~-Ie~L~~~l~~L~~L~Ls~N~I~~-l~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~ 96 (175)
T PF14580_consen 20 KLRELNLRGNQIST-IENLGATLDKLEVLDLSNNQITK-LEGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLS 96 (175)
T ss_dssp -----------------S--TT-TT--EEE-TTS--S---TT----TT--EEE--SS----S-CHHHHHH-TT--EEE-T
T ss_pred cccccccccccccc-ccchhhhhcCCCEEECCCCCCcc-ccCccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECc
Confidence 57889999999985 45676 68999999999999996 567889999999999999999 676655 468999999999
Q ss_pred cCccccccc-hhhcCCCccCeeeccCCcccCcCC-----CCCCCCCCeeec
Q 005880 144 FNNFSGQIP-LTVNHLTHLLTLKLEANRFSGPIT-----GLDLRNLQDFNV 188 (672)
Q Consensus 144 ~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~-----~~~l~~L~~l~l 188 (672)
+|+|...-- ..+..+++|+.|+|.+|.++.... ...+++|+.||-
T Consensus 97 ~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 97 NNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp TS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred CCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 999974221 367789999999999999986322 246889998874
No 459
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.16 E-value=2.4e-10 Score=112.65 Aligned_cols=143 Identities=20% Similarity=0.191 Sum_probs=110.4
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCC--ceeeeEEEEEcC---CeEEEEEeecC
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHP--NLVGLKAYYFAR---EEKLLVSEYMP 439 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~---~~~~lv~e~~~ 439 (672)
+.|+.|.++.||++...+|..+++|....... ....++.+|.++++.+++. ++.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 46899999999999987778999999765332 2356788999999998753 456677776553 25689999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC--------------------------------------
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC-------------------------------------- 481 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-------------------------------------- 481 (672)
+.++.+.+.. ..++..++..++.+++++|++||+..
T Consensus 84 G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 84 GRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9888765531 23677888889999999999998421
Q ss_pred --------------CCCCcEecCCCCCCEEeCC--CCcEEEeccCCCcc
Q 005880 482 --------------KSLKLTHGNIKSTNVLLDK--TGNARVSDFGLSIF 514 (672)
Q Consensus 482 --------------~~~~iiH~Dlkp~NIll~~--~~~~kl~DfG~a~~ 514 (672)
....++|+|+.|.||++++ ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 0245799999999999998 66789999997753
No 460
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.12 E-value=7.4e-10 Score=101.22 Aligned_cols=131 Identities=20% Similarity=0.304 Sum_probs=100.6
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEE-cccCCcc-------hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKR-LKDASIG-------GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~-~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
..+++|+-+.+|.+.+. |..+++|. +++.-.. ....-.+|.+++.+++--.|...+=+..+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999876 44466664 3322111 123456799999988766666556667788888999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
++|-.|.+.+... ...++..+-+-+.-|| ..+|+|+||.++||++..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH----~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA------------RPDLLREVGRLVGKLH----KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc------------chHHHHHHHHHHHHHH----hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999998888643 2567777888888999 89999999999999998765 99999999863
No 461
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.11 E-value=4.7e-11 Score=134.89 Aligned_cols=109 Identities=22% Similarity=0.265 Sum_probs=85.6
Q ss_pred CCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeecc
Q 005880 88 TQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLE 167 (672)
Q Consensus 88 ~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 167 (672)
.+|++|+|++|+|++.++. ..+|+.|++++|+|+ .+|... .+|+.|+|++|+|+ .+|.. .++|+.|+++
T Consensus 342 ~~Lq~LdLS~N~Ls~LP~l---p~~L~~L~Ls~N~L~-~LP~l~---~~L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS 410 (788)
T PRK15387 342 SGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLT-SLPALP---SGLKELIVSGNRLT-SLPVL---PSELKELMVS 410 (788)
T ss_pred cccceEecCCCccCCCCCC---Ccccceehhhccccc-cCcccc---cccceEEecCCccc-CCCCc---ccCCCEEEcc
Confidence 4799999999999975543 356888999999999 578643 57999999999999 57754 3679999999
Q ss_pred CCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcccc
Q 005880 168 ANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFT 210 (672)
Q Consensus 168 ~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~ 210 (672)
+|+|++. |. ...+|+.|++++|+|+ .+|..+.+++.+...
T Consensus 411 ~N~LssI-P~-l~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~L 450 (788)
T PRK15387 411 GNRLTSL-PM-LPSGLLSLSVYRNQLT-RLPESLIHLSSETTV 450 (788)
T ss_pred CCcCCCC-Cc-chhhhhhhhhccCccc-ccChHHhhccCCCeE
Confidence 9999872 22 2457899999999999 899887776665443
No 462
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.10 E-value=1.3e-10 Score=131.98 Aligned_cols=137 Identities=23% Similarity=0.336 Sum_probs=103.9
Q ss_pred CCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 64 QNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
...++.|+|++|+|+..+..+. .+|++|+|++|+|+..+..+. .+|+.|+|++|+++ .+|..+. .+|+.|+|+
T Consensus 198 p~~L~~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~LtsLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls 270 (754)
T PRK15370 198 PEQITTLILDNNELKSLPENLQ--GNIKTLYANSNQLTSIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLF 270 (754)
T ss_pred ccCCcEEEecCCCCCcCChhhc--cCCCEEECCCCccccCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECc
Confidence 3578999999999998766554 589999999999997554553 47999999999999 8888876 489999999
Q ss_pred cCccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcC-CCCCCcccccc
Q 005880 144 FNNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSL-SGFPDSAFTQN 212 (672)
Q Consensus 144 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l-~~~~~~~~~~n 212 (672)
+|+|+ .+|..+. ++|+.|+|++|+|++... .-..+|+.|++++|+|+ .+|..+ .++..+.+.+|
T Consensus 271 ~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~LP~-~lp~sL~~L~Ls~N~Lt-~LP~~l~~sL~~L~Ls~N 335 (754)
T PRK15370 271 HNKIS-CLPENLP--EELRYLSVYDNSIRTLPA-HLPSGITHLNVQSNSLT-ALPETLPPGLKTLEAGEN 335 (754)
T ss_pred CCccC-ccccccC--CCCcEEECCCCccccCcc-cchhhHHHHHhcCCccc-cCCccccccceeccccCC
Confidence 99999 6787664 589999999999987221 11246888888888888 466433 33444444444
No 463
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.07 E-value=1.8e-09 Score=98.11 Aligned_cols=141 Identities=15% Similarity=0.255 Sum_probs=103.7
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEE-cccCCc-------chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKR-LKDASI-------GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~-~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
..+-+|+-+.|+++.+. |+...||. +.+.-. -..++-.+|++++.+++--.|.-..=++.+.....|+|||
T Consensus 13 ~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~ 91 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEF 91 (229)
T ss_pred eeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEe
Confidence 57889999999999987 77767764 322111 1245678899999988655555444456677777899999
Q ss_pred cCC-CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC---cEEEeccCCCc
Q 005880 438 MPN-GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG---NARVSDFGLSI 513 (672)
Q Consensus 438 ~~~-g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~---~~kl~DfG~a~ 513 (672)
+++ .++.+++...-. ..........++..|-+.+.-|| ..+||||||..+||++..++ .+.++|||++.
T Consensus 92 ~~g~~~vk~~i~~~~~---~~~~d~~~~~~~~~iG~~igklH----~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 92 IDGASTVKDFILSTME---DESEDEGLAELARRIGELIGKLH----DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred ccchhHHHHHHHHHcc---CcccchhHHHHHHHHHHHHHHhh----hCCeecccccccceEEecCCCcCceEEEeecchh
Confidence 966 477888765432 12222333788999999999999 89999999999999997655 35899999975
Q ss_pred c
Q 005880 514 F 514 (672)
Q Consensus 514 ~ 514 (672)
.
T Consensus 165 ~ 165 (229)
T KOG3087|consen 165 V 165 (229)
T ss_pred c
Confidence 3
No 464
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.06 E-value=3.9e-10 Score=127.53 Aligned_cols=113 Identities=19% Similarity=0.189 Sum_probs=61.6
Q ss_pred cEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccC
Q 005880 66 RVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFN 145 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 145 (672)
+++.|++.+|+|+..+. .+++|++|+|++|+|+..++. .++|+.|+|++|.|+ .+|..+ .+|+.|+|++|
T Consensus 223 ~L~~L~L~~N~Lt~LP~---lp~~Lk~LdLs~N~LtsLP~l---p~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L~Ls~N 292 (788)
T PRK15387 223 HITTLVIPDNNLTSLPA---LPPELRTLEVSGNQLTSLPVL---PPGLLELSIFSNPLT-HLPALP---SGLCKLWIFGN 292 (788)
T ss_pred CCCEEEccCCcCCCCCC---CCCCCcEEEecCCccCcccCc---ccccceeeccCCchh-hhhhch---hhcCEEECcCC
Confidence 45566666666665432 135566666666666644321 245666666666665 444422 34666677777
Q ss_pred ccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCC
Q 005880 146 NFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLS 194 (672)
Q Consensus 146 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~ 194 (672)
+|+ .+|.. +++|+.|+|++|+|++.... ..+|+.|++++|+|+
T Consensus 293 ~Lt-~LP~~---p~~L~~LdLS~N~L~~Lp~l--p~~L~~L~Ls~N~L~ 335 (788)
T PRK15387 293 QLT-SLPVL---PPGLQELSVSDNQLASLPAL--PSELCKLWAYNNQLT 335 (788)
T ss_pred ccc-ccccc---ccccceeECCCCccccCCCC--cccccccccccCccc
Confidence 766 45542 35677777777777662111 123444444455444
No 465
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.05 E-value=2e-11 Score=127.35 Aligned_cols=133 Identities=26% Similarity=0.370 Sum_probs=121.6
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
..++.|||+.|+++-.+..++.|+ |+.|-+++|+++..++.++.+..|..||.+.|++. .+|..++.|.+|+.|.+..
T Consensus 121 ~~lt~l~ls~NqlS~lp~~lC~lp-Lkvli~sNNkl~~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrR 198 (722)
T KOG0532|consen 121 EALTFLDLSSNQLSHLPDGLCDLP-LKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRR 198 (722)
T ss_pred hHHHHhhhccchhhcCChhhhcCc-ceeEEEecCccccCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhh
Confidence 578899999999998888888776 99999999999988889999999999999999999 9999999999999999999
Q ss_pred CccccccchhhcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCcCC
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKSLS 202 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~l~ 202 (672)
|++. .+|.++..| .|..||+|+|+++. |+.+..|+.|++|-|.+|.|. +-|..+.
T Consensus 199 n~l~-~lp~El~~L-pLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC 254 (722)
T KOG0532|consen 199 NHLE-DLPEELCSL-PLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQ-SPPAQIC 254 (722)
T ss_pred hhhh-hCCHHHhCC-ceeeeecccCceeecchhhhhhhhheeeeeccCCCC-CChHHHH
Confidence 9999 889999855 69999999999998 888999999999999999999 6676554
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.04 E-value=1.3e-10 Score=123.55 Aligned_cols=240 Identities=18% Similarity=0.176 Sum_probs=167.3
Q ss_pred cccCcCCeEEEEEEEEc--CCcEEEEEEcccCCcchHHH--HHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD--DGSVVAVKRLKDASIGGKRE--FEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~--~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
..||.|.|+.||+...+ ++..+++|.+.+.......+ -..|+.+...+ .|.+++++...+......|+--||+++
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~ 350 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEG 350 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcC
Confidence 57999999999998844 67899999887644332222 24455555555 588999988888777788899999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC-CcEEEeccCCCccCCCC-
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT-GNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~-~~~kl~DfG~a~~~~~~- 518 (672)
+++.....- ...++...++++..|++.++.++| ++.++|+|+||+||++..+ +..+++|||.+..+.-.
T Consensus 351 ~s~~l~~~~-----~~~~d~~~~~~~~~q~~~~l~~i~----s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~ 421 (524)
T KOG0601|consen 351 GSSSLRSVT-----SQMLDEDPRLRLTAQILTALNVIH----SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSS 421 (524)
T ss_pred cchhhhhHH-----HHhcCcchhhhhHHHHHhcccccc----chhhhcccccccceeeccchhhhhccccccccccceec
Confidence 988766521 134777889999999999999999 8999999999999999876 78899999998643222
Q ss_pred -CCCCCCccc-CCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 -TVPRSNGYR-APELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 -~~~~t~~y~-aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
......++. ..|++. ....+-.+.|+||||.-+.|.+++.+--.. ..+|. .+.
T Consensus 422 ~~~~~~~r~~p~~~~~~-e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~--------------~~~~~----------~i~ 476 (524)
T KOG0601|consen 422 GVFHHIDRLYPIAEILL-EDYPHLSKADIFSLGLSVDEAITGSPLSES--------------GVQSL----------TIR 476 (524)
T ss_pred ccccccccccccchhhc-cccccccccccccccccccccccCcccCcc--------------cccce----------eee
Confidence 222333444 245443 345677899999999999999998654221 11111 000
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
.......+. ....+..+...+...++..||.+.++....+...
T Consensus 477 ~~~~p~~~~---~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 477 SGDTPNLPG---LKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred cccccCCCc---hHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 111111111 1134555666888999999999998876655443
No 467
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.04 E-value=2.7e-11 Score=116.86 Aligned_cols=120 Identities=24% Similarity=0.238 Sum_probs=83.0
Q ss_pred CCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCe
Q 005880 84 LTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLT 163 (672)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 163 (672)
+.....|+.||||+|.|+..-.+..-+++++.|++|+|.+. .+-. +..|++|+.||||+|.++ .+-..-.+|.+.++
T Consensus 280 ~dTWq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKt 356 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKT 356 (490)
T ss_pred cchHhhhhhccccccchhhhhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhHhhhcCEee
Confidence 44556677788888887765556666777788888888777 4443 777777888888888777 55555566777778
Q ss_pred eeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCC--CcCCCCCCc
Q 005880 164 LKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIP--KSLSGFPDS 207 (672)
Q Consensus 164 L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p--~~l~~~~~~ 207 (672)
|.|+.|.|..-.....+-+|..||+++|++. .+- ..++++|.+
T Consensus 357 L~La~N~iE~LSGL~KLYSLvnLDl~~N~Ie-~ldeV~~IG~LPCL 401 (490)
T KOG1259|consen 357 LKLAQNKIETLSGLRKLYSLVNLDLSSNQIE-ELDEVNHIGNLPCL 401 (490)
T ss_pred eehhhhhHhhhhhhHhhhhheeccccccchh-hHHHhcccccccHH
Confidence 8888887766555566777777888888776 332 345555544
No 468
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.99 E-value=5.4e-11 Score=114.84 Aligned_cols=126 Identities=26% Similarity=0.290 Sum_probs=87.1
Q ss_pred cEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccC
Q 005880 66 RVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFN 145 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 145 (672)
.+++|||++|.|+.+-....-++.++.|+||+|+|.. +..+..|.+|+.||||+|.++ .+-..--+|-+++.|.|+.|
T Consensus 285 ~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~-v~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N 362 (490)
T KOG1259|consen 285 ELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRT-VQNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQN 362 (490)
T ss_pred hhhhccccccchhhhhhhhhhccceeEEeccccceee-ehhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhh
Confidence 3566777777777666666666777777777777774 334677777777777777777 55566666677777777777
Q ss_pred ccccccchhhcCCCccCeeeccCCcccC---cCCCCCCCCCCeeeccCCcCCC
Q 005880 146 NFSGQIPLTVNHLTHLLTLKLEANRFSG---PITGLDLRNLQDFNVSGNHLSG 195 (672)
Q Consensus 146 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~---~~~~~~l~~L~~l~l~~N~l~g 195 (672)
.|. .+ ..+++|-+|..||+++|+|.. ....++++-|++|.|.+|.|.+
T Consensus 363 ~iE-~L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 363 KIE-TL-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hHh-hh-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 775 22 356677777777777777765 2235667777777777777773
No 469
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.94 E-value=3.8e-09 Score=128.14 Aligned_cols=102 Identities=20% Similarity=0.185 Sum_probs=46.7
Q ss_pred cEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccC
Q 005880 66 RVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFN 145 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 145 (672)
.++.|++.++.+...+..+ .+.+|+.|+|++|++...+..+..+++|+.|+|++|...+.+|. ++.+++|+.|+|++|
T Consensus 590 ~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c 667 (1153)
T PLN03210 590 KLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDC 667 (1153)
T ss_pred ccEEEEecCCCCCCCCCcC-CccCCcEEECcCccccccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCC
Confidence 3444444444444333333 23445555555555444333444445555555544433334442 444445555555444
Q ss_pred ccccccchhhcCCCccCeeeccCC
Q 005880 146 NFSGQIPLTVNHLTHLLTLKLEAN 169 (672)
Q Consensus 146 ~l~g~~p~~~~~l~~L~~L~l~~N 169 (672)
.....+|..++++++|+.|++++|
T Consensus 668 ~~L~~lp~si~~L~~L~~L~L~~c 691 (1153)
T PLN03210 668 SSLVELPSSIQYLNKLEDLDMSRC 691 (1153)
T ss_pred CCccccchhhhccCCCCEEeCCCC
Confidence 433344444445555555555443
No 470
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.94 E-value=3.3e-09 Score=128.72 Aligned_cols=134 Identities=24% Similarity=0.278 Sum_probs=115.7
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.+++.|+|.+|.|......+..+++|+.|+|++|...+.+|.++++++|+.|+|++|.....+|..+++|++|+.|++++
T Consensus 611 ~~L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~ 690 (1153)
T PLN03210 611 ENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSR 690 (1153)
T ss_pred cCCcEEECcCccccccccccccCCCCCEEECCCCCCcCcCCccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCC
Confidence 57899999999999877778999999999999987767888999999999999999877779999999999999999999
Q ss_pred CccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcC
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSL 201 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l 201 (672)
|..-+.+|..+ ++++|+.|+|++|...+..+. ...+|+.|++++|.+. .+|..+
T Consensus 691 c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~-~~~nL~~L~L~~n~i~-~lP~~~ 744 (1153)
T PLN03210 691 CENLEILPTGI-NLKSLYRLNLSGCSRLKSFPD-ISTNISWLDLDETAIE-EFPSNL 744 (1153)
T ss_pred CCCcCccCCcC-CCCCCCEEeCCCCCCcccccc-ccCCcCeeecCCCccc-cccccc
Confidence 76555888876 799999999999876554432 2468999999999987 788654
No 471
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.93 E-value=1.4e-08 Score=102.08 Aligned_cols=142 Identities=14% Similarity=0.072 Sum_probs=101.3
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc-----------hHHHHHHHHHHHcCCCCCc--eeeeEEEEEc----
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG-----------GKREFEQHMEVLGRLRHPN--LVGLKAYYFA---- 427 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~---- 427 (672)
.+.+-+.....|++..+. |+.|.||+....... ....+.+|.+.+.++..-+ ....+++...
T Consensus 27 ~e~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 27 GEVFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred CcEEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 345555555567777664 788999977533211 1124778888888774333 3344555543
Q ss_pred -CCeEEEEEeecCCC-ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-----
Q 005880 428 -REEKLLVSEYMPNG-SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK----- 500 (672)
Q Consensus 428 -~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~----- 500 (672)
....++|||++++. +|.+++.... ..+.+...+..++.++++.++-|| ..||+|+|++++|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~---~~~~~~~~~~~ll~~la~~i~~LH----~~Gi~HgDL~~~NiLl~~~~~~~ 178 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWA---TNPPDPRLKRMLIKRVATMVRDMH----AAGINHRDCYICHFLLHLPFPGR 178 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHH----HCcCccCCCChhhEEEeccccCC
Confidence 23578999999876 8998885321 123556778899999999999999 899999999999999975
Q ss_pred --CCcEEEeccCCCcc
Q 005880 501 --TGNARVSDFGLSIF 514 (672)
Q Consensus 501 --~~~~kl~DfG~a~~ 514 (672)
++.+.++||+.+..
T Consensus 179 ~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 179 EEDLKLSVIDLHRAQI 194 (268)
T ss_pred CCCceEEEEECCcccc
Confidence 46899999998753
No 472
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.92 E-value=6.7e-09 Score=100.66 Aligned_cols=138 Identities=22% Similarity=0.282 Sum_probs=99.5
Q ss_pred HHHHHHHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCc----------------------chHHHHHHHHHHHcCCCC
Q 005880 358 EDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI----------------------GGKREFEQHMEVLGRLRH 415 (672)
Q Consensus 358 ~~l~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~----------------------~~~~~~~~e~~~l~~l~h 415 (672)
.+...++++.||-|--+.||.|....|.++|||.-+.... ......++|+++|.+|.-
T Consensus 89 r~~ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~ 168 (304)
T COG0478 89 RGIVEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYP 168 (304)
T ss_pred cChHHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhh
Confidence 3445567899999999999999999999999995431110 012356789999999865
Q ss_pred C--ceeeeEEEEEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCC
Q 005880 416 P--NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKS 493 (672)
Q Consensus 416 ~--niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp 493 (672)
. .+.+.+++ +...+||||+++-.|...- ++......|+..|++-+..+- ..||||+|+++
T Consensus 169 ~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~----~~GiVHGDlSe 230 (304)
T COG0478 169 EGVKVPKPIAW----NRHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAY----RRGIVHGDLSE 230 (304)
T ss_pred cCCCCCCcccc----ccceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHH----HcCccccCCch
Confidence 4 66666644 5678999999886664321 223333444555555554444 47999999999
Q ss_pred CCEEeCCCCcEEEeccCCCc
Q 005880 494 TNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 494 ~NIll~~~~~~kl~DfG~a~ 513 (672)
-||++++||.+.++||--+.
T Consensus 231 fNIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 231 FNILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred heEEEecCCCEEEEeCcccc
Confidence 99999999999999996443
No 473
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.92 E-value=3.6e-08 Score=102.84 Aligned_cols=172 Identities=23% Similarity=0.260 Sum_probs=130.4
Q ss_pred CeEEEEEEE-EcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEE----cCCeEEEEEeecCC-CChhH
Q 005880 372 GFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYF----AREEKLLVSEYMPN-GSLFW 445 (672)
Q Consensus 372 ~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~~lv~e~~~~-g~L~~ 445 (672)
.-.+.||+. ..||..|++|+++............-+++++++.|+|||++.+++. .+...++||+|+++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 346889998 4589999999996544434444456678899999999999998886 34567899999985 56766
Q ss_pred HhhcCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 446 LLHGNRG----------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 446 ~l~~~~~----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
+-..... ......++..+|.++.|+..||.++| +.|+.-+-|.+.+|+++.+.+++|+..|.....
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH----ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH----SSGLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH----hcCceeecccHhHeEeeCcceEEEecccceeee
Confidence 5433221 12345788999999999999999999 778888999999999999999999988887655
Q ss_pred CCCCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCC
Q 005880 516 PPSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561 (672)
Q Consensus 516 ~~~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P 561 (672)
..+. . |.+. --.+-|.=.||.+++.|.||..-
T Consensus 444 ~~d~-------~--~~le-----~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDP-------T--EPLE-----SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCC-------C--cchh-----HHhhhhHHHHHHHHHHHhhcccc
Confidence 4432 0 1111 12367999999999999998643
No 474
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.91 E-value=7.8e-09 Score=97.80 Aligned_cols=125 Identities=22% Similarity=0.292 Sum_probs=82.4
Q ss_pred EEEEEEEcCCcEEEEEEcccCCc---------------------c-----hHHHHHHHHHHHcCCCCC--ceeeeEEEEE
Q 005880 375 TAYKAVLDDGSVVAVKRLKDASI---------------------G-----GKREFEQHMEVLGRLRHP--NLVGLKAYYF 426 (672)
Q Consensus 375 ~Vy~~~~~~g~~vavK~~~~~~~---------------------~-----~~~~~~~e~~~l~~l~h~--niv~l~~~~~ 426 (672)
.||.|...+|..+|||+.+.... . .....++|++.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999998999999998742100 0 123467899999999765 455665442
Q ss_pred cCCeEEEEEeecC--CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHhhCCCCCcEecCCCCCCEEeCCCCc
Q 005880 427 AREEKLLVSEYMP--NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF-IHFTCKSLKLTHGNIKSTNVLLDKTGN 503 (672)
Q Consensus 427 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~-LH~~~~~~~iiH~Dlkp~NIll~~~~~ 503 (672)
..++||||++ +..+..+.... ++......++.++++.+.. +| ..+|+||||.+.||+++++ .
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-------~~~~~~~~~~~~il~~~~~~~~----~~givHGDLs~~NIlv~~~-~ 144 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-------LSPEEPKELLEEILEEIIKMLH----KAGIVHGDLSEYNILVDDG-K 144 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-------GGGSTHHHHHHHHHHHHHHHHH----CTTEEESS-STTSEEEETT-C
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-------ccchhHHHHHHHHHHHHHHHHH----hcCceecCCChhhEEeecc-e
Confidence 4579999998 55554443321 1233456677777775555 46 7899999999999999988 9
Q ss_pred EEEeccCCCccC
Q 005880 504 ARVSDFGLSIFA 515 (672)
Q Consensus 504 ~kl~DfG~a~~~ 515 (672)
+.|+|||.+...
T Consensus 145 ~~iIDf~qav~~ 156 (188)
T PF01163_consen 145 VYIIDFGQAVDS 156 (188)
T ss_dssp EEE--GTTEEET
T ss_pred EEEEecCcceec
Confidence 999999987654
No 475
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.89 E-value=2.2e-10 Score=114.82 Aligned_cols=149 Identities=23% Similarity=0.264 Sum_probs=120.3
Q ss_pred EEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEeccc-Cc
Q 005880 69 HLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF-NN 146 (672)
Q Consensus 69 ~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~-N~ 146 (672)
.++-++-+|+.+|..+. ..-+.|+|..|+|+.++| .|+.+++|+.||||+|+|+-.-|..|.+|.+|..|-+-+ |+
T Consensus 50 ~VdCr~~GL~eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 50 IVDCRGKGLTEVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred eEEccCCCcccCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 34555666776766554 356889999999999888 899999999999999999988899999999987766655 99
Q ss_pred cccccc-hhhcCCCccCeeeccCCcccCcC--CCCCCCCCCeeeccCCcCCCCCCC-cCC---CCCCccccccccccCCC
Q 005880 147 FSGQIP-LTVNHLTHLLTLKLEANRFSGPI--TGLDLRNLQDFNVSGNHLSGQIPK-SLS---GFPDSAFTQNAALCGSP 219 (672)
Q Consensus 147 l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~--~~~~l~~L~~l~l~~N~l~g~~p~-~l~---~~~~~~~~~n~~lc~~~ 219 (672)
|+ .+| ..|++|..|+.|.+.-|++.-.. .+..+++|..|.+-+|.+. .++. .|. ....+....|+..|+|.
T Consensus 128 I~-~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCn 205 (498)
T KOG4237|consen 128 IT-DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCN 205 (498)
T ss_pred hh-hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccc
Confidence 99 555 48999999999999999998733 3568999999999999998 6775 444 44455566789889886
Q ss_pred Cc
Q 005880 220 MQ 221 (672)
Q Consensus 220 ~~ 221 (672)
++
T Consensus 206 L~ 207 (498)
T KOG4237|consen 206 LP 207 (498)
T ss_pred cc
Confidence 64
No 476
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.87 E-value=1.6e-09 Score=82.84 Aligned_cols=61 Identities=38% Similarity=0.404 Sum_probs=40.5
Q ss_pred cccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcc
Q 005880 111 TALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRF 171 (672)
Q Consensus 111 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l 171 (672)
++|++|+|++|+|+...+..|.++++|++|++++|+|+...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3566777777777744345666677777777777777755555667777777777777764
No 477
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.85 E-value=3.7e-10 Score=124.40 Aligned_cols=135 Identities=30% Similarity=0.374 Sum_probs=111.8
Q ss_pred EeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCc
Q 005880 67 VSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNN 146 (672)
Q Consensus 67 v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 146 (672)
+..|+|++|.+...+.++..+.+|+.|+++.|.|...+-+.+++.+|++|+|.+|.+. .+|.++..+.+|+.||+|+|+
T Consensus 47 L~~l~lsnn~~~~fp~~it~l~~L~~ln~s~n~i~~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~ 125 (1081)
T KOG0618|consen 47 LKSLDLSNNQISSFPIQITLLSHLRQLNLSRNYIRSVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNH 125 (1081)
T ss_pred eEEeeccccccccCCchhhhHHHHhhcccchhhHhhCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhc
Confidence 8899999999999988899999999999999999987769999999999999999999 999999999999999999999
Q ss_pred cccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCC
Q 005880 147 FSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPD 206 (672)
Q Consensus 147 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~ 206 (672)
|. .+|..+..++.+..+.+++|......+.. .++.+++..|.+.+.++..+..+..
T Consensus 126 f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~---~ik~~~l~~n~l~~~~~~~i~~l~~ 181 (1081)
T KOG0618|consen 126 FG-PIPLVIEVLTAEEELAASNNEKIQRLGQT---SIKKLDLRLNVLGGSFLIDIYNLTH 181 (1081)
T ss_pred cC-CCchhHHhhhHHHHHhhhcchhhhhhccc---cchhhhhhhhhcccchhcchhhhhe
Confidence 98 99999999999999999999222111111 1555566666666666655555444
No 478
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.85 E-value=1.1e-09 Score=118.08 Aligned_cols=138 Identities=30% Similarity=0.407 Sum_probs=110.2
Q ss_pred CcEeEEEecCCCcccCCCCCCCCC-CccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLT-QLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
..++.|++.+|.++...+....+. +|+.|++++|++...+..+.++++|+.|++++|+++ .+|...+.+++|+.|+++
T Consensus 116 ~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls 194 (394)
T COG4886 116 TNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLS 194 (394)
T ss_pred cceeEEecCCcccccCccccccchhhcccccccccchhhhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheecc
Confidence 468899999999998877777775 999999999999976668899999999999999999 888888888999999999
Q ss_pred cCccccccchhhcCCCccCeeeccCCc-ccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCC
Q 005880 144 FNNFSGQIPLTVNHLTHLLTLKLEANR-FSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFP 205 (672)
Q Consensus 144 ~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~ 205 (672)
+|+++ .+|..+..+..|++|.+++|+ +.-+.....+.++..|.+.+|++. .+|..+..++
T Consensus 195 ~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~ 255 (394)
T COG4886 195 GNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLS 255 (394)
T ss_pred CCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceee-eccchhcccc
Confidence 99999 888887777789999999995 343555566666666667777666 3344444443
No 479
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.83 E-value=1.9e-09 Score=82.42 Aligned_cols=60 Identities=45% Similarity=0.515 Sum_probs=51.5
Q ss_pred CCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCcc
Q 005880 88 TQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNF 147 (672)
Q Consensus 88 ~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l 147 (672)
++|++|+|++|+|+..++ .|.++++|++|+|++|+++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 478889999999988776 788899999999999999866667889999999999999876
No 480
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.83 E-value=7.9e-10 Score=115.50 Aligned_cols=131 Identities=24% Similarity=0.291 Sum_probs=96.1
Q ss_pred CcEeEEEecCCCcccCCCC-CCCC---CCccEEEcccCCCCCCC----C-CCCcc-cccceeeccccccCCC----CChh
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSL---TQLRVLSLKYNRFTGPV----P-SLSNL-TALKLLFLSHNNFNGE----FPDS 130 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l---~~L~~L~L~~N~l~~~~----p-~~~~l-~~L~~L~l~~N~l~g~----~p~~ 130 (672)
.+++.|+|++|.+.+..+. +..+ ++|++|+|++|++++.. . .+..+ ++|+.|+|++|.+++. ++..
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 160 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKA 160 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHH
Confidence 5889999999988754433 3333 45999999999988421 1 35566 8899999999998853 3445
Q ss_pred hhccCCCCeEecccCccccc----cchhhcCCCccCeeeccCCcccCcC------CCCCCCCCCeeeccCCcCCC
Q 005880 131 VSSLFRLYRLDLSFNNFSGQ----IPLTVNHLTHLLTLKLEANRFSGPI------TGLDLRNLQDFNVSGNHLSG 195 (672)
Q Consensus 131 ~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~------~~~~l~~L~~l~l~~N~l~g 195 (672)
+..+.+|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++.. ....+++|++|++++|.+++
T Consensus 161 ~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 161 LRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 66777899999999998842 4445666778999999999887521 13467889999999998875
No 481
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.80 E-value=1.4e-09 Score=121.65 Aligned_cols=235 Identities=21% Similarity=0.228 Sum_probs=152.4
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+-+-+|.++.++.+.-. .|...+.|.......- ..+....+-.++-..+||-++....-+......+||++|+.++
T Consensus 810 ~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~ 889 (1205)
T KOG0606|consen 810 KPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGG 889 (1205)
T ss_pred ccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccC
Confidence 46778999998887733 3444444443322211 1122222222332335677776655555677889999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC-----
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP----- 516 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~----- 516 (672)
+|...|+... ..+..........+..+++||| ...+.|||++|.|++...++..++.|||......
T Consensus 890 ~~~Skl~~~~-----~~saepaRs~i~~~vqs~e~L~----s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 890 DLPSKLHNSG-----CLSAEPARSPILERVQSLESLH----SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred CchhhhhcCC-----CcccccccchhHHHHhhhhccc----cchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence 9999998653 2444444556667788999999 6679999999999999999999999998432110
Q ss_pred ----------------C---------------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 517 ----------------P---------------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 517 ----------------~---------------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
. ....+|..|.+||.+. +...+..+|.|+.|++++|.++|.+||...
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~l--g~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILL--GRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccc--cccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 0 0234577899999654 667788999999999999999999999765
Q ss_pred CCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHH
Q 005880 566 GGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMS 632 (672)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 632 (672)
.....+ +.+... .........+...+..+++...+..+|.+|-.|.
T Consensus 1039 tpq~~f------------~ni~~~---------~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1039 TPQQIF------------ENILNR---------DIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred chhhhh------------hccccC---------CCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 433211 111111 1111111122233445566677788888887766
No 482
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.80 E-value=2.7e-09 Score=115.00 Aligned_cols=153 Identities=29% Similarity=0.330 Sum_probs=127.1
Q ss_pred CcccceEEcCCcEe---EEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCccc-ccceeeccccccCCCCChh
Q 005880 55 CSWTGVSCLQNRVS---HLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLT-ALKLLFLSHNNFNGEFPDS 130 (672)
Q Consensus 55 c~w~gv~c~~~~v~---~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~-~L~~L~l~~N~l~g~~p~~ 130 (672)
+.+.+..+....+. .+++..+.+...+..+..++.++.|++.+|.++.+.+....+. +|+.|++++|++. .+|..
T Consensus 80 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~ 158 (394)
T COG4886 80 ISSLDGSENLLNLLPLPSLDLNLNRLRSNISELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIE-SLPSP 158 (394)
T ss_pred cccccccccccCCCCCceeeccccccccCchhhhcccceeEEecCCcccccCccccccchhhcccccccccchh-hhhhh
Confidence 55666666665555 5899999887777778888999999999999998888888885 9999999999999 88889
Q ss_pred hhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcCCC-CCCCCCCeeeccCCcCCCCCCCcCCCCCCccc
Q 005880 131 VSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPITG-LDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAF 209 (672)
Q Consensus 131 ~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~ 209 (672)
++.+++|+.|++++|+++ .+|...+.+++|+.|++++|+++.-... ..+..|++|++++|.+. .++..+..+..+..
T Consensus 159 ~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~ 236 (394)
T COG4886 159 LRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSG 236 (394)
T ss_pred hhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccc
Confidence 999999999999999999 8888887999999999999999984443 45666999999999755 56666666655544
Q ss_pred c
Q 005880 210 T 210 (672)
Q Consensus 210 ~ 210 (672)
.
T Consensus 237 l 237 (394)
T COG4886 237 L 237 (394)
T ss_pred c
Confidence 4
No 483
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.75 E-value=6e-10 Score=95.73 Aligned_cols=134 Identities=20% Similarity=0.223 Sum_probs=94.4
Q ss_pred cEeEEEecCCCcccCCCC---CCCCCCccEEEcccCCCCCCCCCCC-cccccceeeccccccCCCCChhhhccCCCCeEe
Q 005880 66 RVSHLVLENLQLSGSLQP---LTSLTQLRVLSLKYNRFTGPVPSLS-NLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLD 141 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~---l~~l~~L~~L~L~~N~l~~~~p~~~-~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 141 (672)
..-.++|+++.|-..... +....+|+..+|++|.|...++.|. ..+.++.|+|++|.|+ .+|.++..++.|+.|+
T Consensus 28 E~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred HhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 345678888877644433 6777888888999999988777554 4568888999999998 8888888899999999
Q ss_pred cccCccccccchhhcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCcC
Q 005880 142 LSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKSL 201 (672)
Q Consensus 142 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~l 201 (672)
+++|.|. ..|..+..|.+|..|+..+|.+.. +.....-..+-..++.+|.+.+.-|..+
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~eid~dl~~s~~~al~~lgnepl~~~~~~kl 166 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARAEIDVDLFYSSLPALIKLGNEPLGDETKKKL 166 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccccCcHHHhccccHHHHHhcCCcccccCcccc
Confidence 9999988 778888888888888888777654 2221111222233445556655555433
No 484
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.72 E-value=1.6e-08 Score=70.79 Aligned_cols=38 Identities=50% Similarity=1.015 Sum_probs=29.1
Q ss_pred hhhHHHHHHHHhcCCC-C-CCCCCCCCC--CCCCcccceEEc
Q 005880 26 SPDLNALLDFKASSDE-A-NKLTTWNST--SDPCSWTGVSCL 63 (672)
Q Consensus 26 ~~d~~all~~k~~~~~-~-~~~~~W~~~--~~~c~w~gv~c~ 63 (672)
.+|++||++||+++.. + +.+.+|+.+ ++||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 5799999999999873 3 568999987 799999999995
No 485
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.71 E-value=4.2e-09 Score=110.02 Aligned_cols=131 Identities=22% Similarity=0.177 Sum_probs=93.0
Q ss_pred CcEeEEEecCCCcccCC-------CCCCCCCCccEEEcccCCCCCCCC-CCCcccc---cceeeccccccCC----CCCh
Q 005880 65 NRVSHLVLENLQLSGSL-------QPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTA---LKLLFLSHNNFNG----EFPD 129 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~-------~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~---L~~L~l~~N~l~g----~~p~ 129 (672)
..++.|+++++.+.+.. ..+..+++|+.|+|++|.+.+..+ .+..+.+ |++|++++|++++ .+..
T Consensus 51 ~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~ 130 (319)
T cd00116 51 PSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAK 130 (319)
T ss_pred CCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHH
Confidence 45778888887776311 125668889999999988886544 4444444 8999999988873 3344
Q ss_pred hhhcc-CCCCeEecccCccccc----cchhhcCCCccCeeeccCCcccCcC------CCCCCCCCCeeeccCCcCCC
Q 005880 130 SVSSL-FRLYRLDLSFNNFSGQ----IPLTVNHLTHLLTLKLEANRFSGPI------TGLDLRNLQDFNVSGNHLSG 195 (672)
Q Consensus 130 ~~~~l-~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~------~~~~l~~L~~l~l~~N~l~g 195 (672)
.+..+ ++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++.. ....+++|+.|++++|.+++
T Consensus 131 ~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 207 (319)
T cd00116 131 GLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTD 207 (319)
T ss_pred HHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccCh
Confidence 56666 7889999999988843 3445667788999999998887511 12345688999999988874
No 486
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.69 E-value=1.9e-07 Score=95.13 Aligned_cols=267 Identities=15% Similarity=0.157 Sum_probs=150.7
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEE----EE--cCCe-EEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAY----YF--AREE-KLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~----~~--~~~~-~~lv~e 436 (672)
+..||+|+.+.+|-.--- +. .+-|+..........+... .|.+. .||-+-.-+.+ .+ ++.. .-++|+
T Consensus 16 gr~LgqGgea~ly~l~e~-~d-~VAKIYh~Pppa~~aqk~a---~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV-RD-QVAKIYHAPPPAAQAQKVA---ELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred CccccCCccceeeecchh-hc-hhheeecCCCchHHHHHHH---HhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 356999999999954321 12 2347666544333333222 23333 46544331111 11 1222 346777
Q ss_pred ecCCC-ChhHHhhcC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 437 YMPNG-SLFWLLHGN-RGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 437 ~~~~g-~L~~~l~~~-~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
.+++. ...++.... +...-...+|...++.+..+|.+.+-|| ..|.+-+|+.++|+|+++++.+.|.|=..-..
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH----~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH----EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH----hcCCcccccCccceeeecCceEEEEcccceee
Confidence 77553 222222211 1122345899999999999999999999 78889999999999999999999998654333
Q ss_pred CCCC----CCCCCCcccCCCcccc---CCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 515 APPS----TVPRSNGYRAPELSSS---DGRKQSQKSDVYSFGVLLLELLTG-KCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 515 ~~~~----~~~~t~~y~aPE~l~~---~~~~~~~~~DV~S~Gvvl~el~tg-~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
...+ ..++...|.+||.-.. .+..-+...|-|.+||++++++.| ++||.+-.....-....+.++..-....
T Consensus 167 ~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~y 246 (637)
T COG4248 167 NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAY 246 (637)
T ss_pred ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeee
Confidence 2222 4567788999995321 133456788999999999999987 9999753221100000010111000000
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCC--CCCCCCHHHHHHHHHHHhc
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSAS--PDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~d--P~~RPt~~evl~~L~~i~~ 643 (672)
.........-.+......-+......++. +|+... +.-|||++.-+..|.++.+
T Consensus 247 a~~~~~g~~p~P~~~P~~~Lpp~vqAlF~---qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 247 ASDQRRGLKPPPRSIPLSMLPPDVQALFQ---QAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred chhccCCCCCCCCCCChhhcCHHHHHHHH---HHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 00000000001111111122233344444 777543 5689999999888877653
No 487
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.65 E-value=1.7e-07 Score=101.83 Aligned_cols=152 Identities=19% Similarity=0.255 Sum_probs=98.2
Q ss_pred CHHHHHHHHh-cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc------------------------------------
Q 005880 356 ELEDLLRASA-EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG------------------------------------ 398 (672)
Q Consensus 356 ~~~~l~~~~~-~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~------------------------------------ 398 (672)
.++|+...+. +-|+.++.|.||+|++++|+.||||+.+..-..
T Consensus 120 ~iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~ 199 (517)
T COG0661 120 PIEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFE 199 (517)
T ss_pred CHHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHH
Confidence 3444444444 568899999999999999999999987532110
Q ss_pred ----hHHHHHHHHHHHcCC-----CCCceeeeEEEEEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHH
Q 005880 399 ----GKREFEQHMEVLGRL-----RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG 469 (672)
Q Consensus 399 ----~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ 469 (672)
.+-++.+|..-+.++ +.+++.-..=|..-.....|+|||++|-.+.+...-.. ..++. ..++..
T Consensus 200 ~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~----~g~d~---k~ia~~ 272 (517)
T COG0661 200 KRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS----AGIDR---KELAEL 272 (517)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh----cCCCH---HHHHHH
Confidence 011244555545444 23444333323334567889999999999988743222 11342 233333
Q ss_pred HHHH-HHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 470 AARG-LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 470 ia~~-L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++++ +..+- ..++.|.|..|.||+++.+|++.+.|||+.....+.
T Consensus 273 ~~~~f~~q~~----~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 273 LVRAFLRQLL----RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred HHHHHHHHHH----hcCccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 3332 11221 359999999999999999999999999998776653
No 488
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.53 E-value=7.4e-07 Score=86.56 Aligned_cols=106 Identities=25% Similarity=0.302 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHcCCCC--CceeeeEEEEEcC----CeEEEEEeecCCC-ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 005880 400 KREFEQHMEVLGRLRH--PNLVGLKAYYFAR----EEKLLVSEYMPNG-SLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472 (672)
Q Consensus 400 ~~~~~~e~~~l~~l~h--~niv~l~~~~~~~----~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~ 472 (672)
.....+|.+.+.++.. =.+.+.+++.... ...++|+|++++. +|.+++.... ..+......++.++++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~-----~~~~~~~~~ll~~l~~ 129 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE-----QLDPSQRRELLRALAR 129 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc-----ccchhhHHHHHHHHHH
Confidence 4567788887777743 3345566666542 2458999999874 7999987532 1556678899999999
Q ss_pred HHHHHHhhCCCCCcEecCCCCCCEEeCCCC---cEEEeccCCCcc
Q 005880 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTG---NARVSDFGLSIF 514 (672)
Q Consensus 473 ~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~---~~kl~DfG~a~~ 514 (672)
.++-|| ..+|+|+|+++.|||++.+. .+.++||+-++.
T Consensus 130 ~i~~lH----~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 130 LIAKLH----DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHH----HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999999 89999999999999999877 899999997754
No 489
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.53 E-value=2.3e-08 Score=108.10 Aligned_cols=144 Identities=24% Similarity=0.420 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--------------CCCCCCcccCCCcc
Q 005880 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--------------TVPRSNGYRAPELS 532 (672)
Q Consensus 467 ~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--------------~~~~t~~y~aPE~l 532 (672)
+.+++.||.|+|. +.++||++|.|++|.++..+.+||+.|+++...... -......|.|||++
T Consensus 105 l~~v~dgl~flh~---sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~ 181 (700)
T KOG2137|consen 105 LGNVADGLAFLHR---SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYL 181 (700)
T ss_pred hhcccchhhhhcc---CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhh
Confidence 3445699999993 678999999999999999999999999987654441 11123459999976
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHH
Q 005880 533 SSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMV 611 (672)
Q Consensus 533 ~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 611 (672)
. +...+.++|+||+||++|.+.. |+.-+...+.... .-.. ....+....... .....
T Consensus 182 ~--~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~-----------~~~~-------~~~~~~~~~~~s--~~~p~ 239 (700)
T KOG2137|consen 182 L--GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS-----------YSFS-------RNLLNAGAFGYS--NNLPS 239 (700)
T ss_pred c--cccccccccceeeeeEEEEEecCCcchhhccCCcch-----------hhhh-------hccccccccccc--ccCcH
Confidence 5 4678899999999999999994 4444433221110 0000 000111111111 22334
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHH
Q 005880 612 GLLQVAMACTSASPDQRPNMSHVV 635 (672)
Q Consensus 612 ~l~~li~~Cl~~dP~~RPt~~evl 635 (672)
++.+=+.+.+..++..||++.++.
T Consensus 240 el~~~l~k~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 240 ELRESLKKLLNGDSAVRPTLDLLL 263 (700)
T ss_pred HHHHHHHHHhcCCcccCcchhhhh
Confidence 566666688999999999777664
No 490
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.49 E-value=2.5e-08 Score=101.74 Aligned_cols=129 Identities=26% Similarity=0.252 Sum_probs=67.4
Q ss_pred CcEeEEEecCCCcccCCCC---CCCCCCccEEEcccCCCCCCCCC--CCcccccceeeccccccC---------------
Q 005880 65 NRVSHLVLENLQLSGSLQP---LTSLTQLRVLSLKYNRFTGPVPS--LSNLTALKLLFLSHNNFN--------------- 124 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~---l~~l~~L~~L~L~~N~l~~~~p~--~~~l~~L~~L~l~~N~l~--------------- 124 (672)
.+|+.|||+.|-+....+- ...|++|+.|+|+.|++.-...+ -..++.|+.|.|+.+.|+
T Consensus 146 ~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~ 225 (505)
T KOG3207|consen 146 PNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLE 225 (505)
T ss_pred CcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHH
Confidence 4677777777766543322 45677777788887777654431 123344444444444443
Q ss_pred ----------CCCChhhhccCCCCeEecccCccccccc--hhhcCCCccCeeeccCCcccC-cCCC-------CCCCCCC
Q 005880 125 ----------GEFPDSVSSLFRLYRLDLSFNNFSGQIP--LTVNHLTHLLTLKLEANRFSG-PITG-------LDLRNLQ 184 (672)
Q Consensus 125 ----------g~~p~~~~~l~~L~~L~l~~N~l~g~~p--~~~~~l~~L~~L~l~~N~l~~-~~~~-------~~l~~L~ 184 (672)
+.--....-+..|++|||++|++- ..+ ...+.++.|..|+++.+.++. ..+. ..+++|+
T Consensus 226 ~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~ 304 (505)
T KOG3207|consen 226 VLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLE 304 (505)
T ss_pred HhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccce
Confidence 122222233445555566555554 333 234555555555555555544 1111 2345666
Q ss_pred eeeccCCcCC
Q 005880 185 DFNVSGNHLS 194 (672)
Q Consensus 185 ~l~l~~N~l~ 194 (672)
+|+++.|++.
T Consensus 305 ~L~i~~N~I~ 314 (505)
T KOG3207|consen 305 YLNISENNIR 314 (505)
T ss_pred eeecccCccc
Confidence 6666666654
No 491
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.49 E-value=2.2e-06 Score=84.41 Aligned_cols=133 Identities=16% Similarity=0.105 Sum_probs=85.5
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCc--eeeeEEEEEcCCeEEEEEeecCCCC-
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPN--LVGLKAYYFAREEKLLVSEYMPNGS- 442 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~- 442 (672)
..||+|..+.||+. .|..+++|...... ......+|.++++.+..-. +.+.+++....+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 57899999999984 24567788876533 3455788999998885433 4567777777777889999998863
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHH---------------------------------------HHHHHhhCCC
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARG---------------------------------------LAFIHFTCKS 483 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~---------------------------------------L~~LH~~~~~ 483 (672)
+...+.. +......++..+++. ..+|......
T Consensus 82 ~~~~~~~---------~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~ 152 (226)
T TIGR02172 82 FSRIISD---------NPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDT 152 (226)
T ss_pred hhhhhcC---------CHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCC
Confidence 2211110 001111111111111 2222212223
Q ss_pred CCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 484 ~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
..++|+|+.|.||++++++ +.++||+.+.
T Consensus 153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 153 STCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 4579999999999999888 9999998764
No 492
>PRK09902 hypothetical protein; Provisional
Probab=98.48 E-value=2.8e-06 Score=80.95 Aligned_cols=138 Identities=18% Similarity=0.155 Sum_probs=101.6
Q ss_pred cCcCCeEEEEEEEEcCCcEEEEEEcccCC------cchHHHHHHHHHHHcCCCC--CceeeeEEEEEc----CCeEEEEE
Q 005880 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDAS------IGGKREFEQHMEVLGRLRH--PNLVGLKAYYFA----REEKLLVS 435 (672)
Q Consensus 368 lg~G~~g~Vy~~~~~~g~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~----~~~~~lv~ 435 (672)
-|+||-+.|++-.+. |..+-+|+-...- .-....|.+|+..+.++.. -.+.+.+.+... ....+||+
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 366888889987776 4468888765211 2256789999999988853 234444422211 12457999
Q ss_pred eecCC-CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc--EEEeccCCC
Q 005880 436 EYMPN-GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN--ARVSDFGLS 512 (672)
Q Consensus 436 e~~~~-g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~--~kl~DfG~a 512 (672)
|-+++ -+|.+++.... ..+.+...+..+..++++.++-|| +.++.|+|+.+.||+++.++. ++++||.-+
T Consensus 105 e~L~g~~~L~~~l~~~~---~~~~~~~~k~~il~~va~~ia~LH----~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~ 177 (216)
T PRK09902 105 EDMAGFISIADWYAQHA---VSPYSDEVRQAMLKAVALAFKKMH----SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKS 177 (216)
T ss_pred EeCCCCccHHHHHhcCC---cCCcchHHHHHHHHHHHHHHHHHH----HCCCcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence 97753 58888886432 234677888999999999999999 899999999999999986666 999999866
Q ss_pred c
Q 005880 513 I 513 (672)
Q Consensus 513 ~ 513 (672)
+
T Consensus 178 r 178 (216)
T PRK09902 178 R 178 (216)
T ss_pred c
Confidence 4
No 493
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.44 E-value=3.7e-09 Score=113.45 Aligned_cols=125 Identities=31% Similarity=0.343 Sum_probs=87.7
Q ss_pred CccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccch-hhcCCCccCeeecc
Q 005880 89 QLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPL-TVNHLTHLLTLKLE 167 (672)
Q Consensus 89 ~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~L~l~ 167 (672)
.|.+.+.++|++.-.-.++.-++.|+.|||++|+++. .- .+..|+.|++|||++|.|+ .+|. ....+. |+.|.|+
T Consensus 165 ~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~-v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTK-VD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhh-hH-HHHhcccccccccccchhc-cccccchhhhh-heeeeec
Confidence 4666777888887655577778888888888888884 32 7788888888888888888 5654 344454 8888888
Q ss_pred CCcccCcCCCCCCCCCCeeeccCCcCCCCCC----CcCCCCCCccccccccccC
Q 005880 168 ANRFSGPITGLDLRNLQDFNVSGNHLSGQIP----KSLSGFPDSAFTQNAALCG 217 (672)
Q Consensus 168 ~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p----~~l~~~~~~~~~~n~~lc~ 217 (672)
+|.++.-....+|++|..|||++|-|.+--- -.+..+..|-+.|||--|.
T Consensus 241 nN~l~tL~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 241 NNALTTLRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred ccHHHhhhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 8888877777788888888888888774211 1122333444456654443
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.44 E-value=2e-09 Score=115.48 Aligned_cols=124 Identities=27% Similarity=0.270 Sum_probs=100.8
Q ss_pred cEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChh-hhccCCCCeEeccc
Q 005880 66 RVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDS-VSSLFRLYRLDLSF 144 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~l~~ 144 (672)
.+...+.+.|.|...-..+.-++.|+.|||++|+++..- .+..|++|++|||++|.|. .+|.- ...+ .|+.|.|+|
T Consensus 165 ~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lrn 241 (1096)
T KOG1859|consen 165 KLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLRN 241 (1096)
T ss_pred hHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhc-cccccchhhh-hheeeeecc
Confidence 456677778888766666788899999999999999654 7888999999999999999 66642 3333 499999999
Q ss_pred CccccccchhhcCCCccCeeeccCCcccC---cCCCCCCCCCCeeeccCCcCC
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSG---PITGLDLRNLQDFNVSGNHLS 194 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~---~~~~~~l~~L~~l~l~~N~l~ 194 (672)
|.++ .+ ..+.+|.+|+.|||+.|-|++ -.+.+.|..|..|+|.+|.+.
T Consensus 242 N~l~-tL-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 242 NALT-TL-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cHHH-hh-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 9998 33 368899999999999999988 334567888999999999987
No 495
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.31 E-value=1.4e-07 Score=102.12 Aligned_cols=105 Identities=33% Similarity=0.384 Sum_probs=66.7
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
..+..|+|.+|.|......+..+.+|++|+|++|.|+.+ ..+..++.|+.|++++|.++ .+ ..+..+.+|+.+++++
T Consensus 95 ~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i-~~l~~l~~L~~L~l~~N~i~-~~-~~~~~l~~L~~l~l~~ 171 (414)
T KOG0531|consen 95 KSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKL-EGLSTLTLLKELNLSGNLIS-DI-SGLESLKSLKLLDLSY 171 (414)
T ss_pred cceeeeeccccchhhcccchhhhhcchheeccccccccc-cchhhccchhhheeccCcch-hc-cCCccchhhhcccCCc
Confidence 456677777777765554466677777777777777743 34555566777777777776 33 2344466777777777
Q ss_pred Cccccccchh-hcCCCccCeeeccCCcccC
Q 005880 145 NNFSGQIPLT-VNHLTHLLTLKLEANRFSG 173 (672)
Q Consensus 145 N~l~g~~p~~-~~~l~~L~~L~l~~N~l~~ 173 (672)
|.++ .+... ...+.+|+.+++.+|.+..
T Consensus 172 n~i~-~ie~~~~~~~~~l~~l~l~~n~i~~ 200 (414)
T KOG0531|consen 172 NRIV-DIENDELSELISLEELDLGGNSIRE 200 (414)
T ss_pred chhh-hhhhhhhhhccchHHHhccCCchhc
Confidence 7776 33332 4566666777777766554
No 496
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.24 E-value=2.4e-07 Score=100.33 Aligned_cols=124 Identities=29% Similarity=0.321 Sum_probs=77.2
Q ss_pred EeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCc
Q 005880 67 VSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNN 146 (672)
Q Consensus 67 v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 146 (672)
+..+++..|.+......+..+++|+.|+|..|+|.++...+..+++|++|+|++|+|+.. ..+..++.|+.|++++|.
T Consensus 74 l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~l~~N~ 151 (414)
T KOG0531|consen 74 LKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELNLSGNL 151 (414)
T ss_pred HHhhccchhhhhhhhcccccccceeeeeccccchhhcccchhhhhcchheeccccccccc--cchhhccchhhheeccCc
Confidence 444455566655434446667777777777777775444466677777777777777633 235555667777777777
Q ss_pred cccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCC
Q 005880 147 FSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLS 194 (672)
Q Consensus 147 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~ 194 (672)
|+ .+ ..+..+++|+.+++++|+++.... ...+.+|+.+++++|.+.
T Consensus 152 i~-~~-~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 152 IS-DI-SGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIR 199 (414)
T ss_pred ch-hc-cCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchh
Confidence 76 22 244456677777777777766444 356666777777777665
No 497
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.24 E-value=1.1e-07 Score=82.06 Aligned_cols=107 Identities=20% Similarity=0.230 Sum_probs=91.6
Q ss_pred CcEeEEEecCCCcccCCCCCC-CCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 65 NRVSHLVLENLQLSGSLQPLT-SLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
.+++.++|++|.+...++.|. ..+.++.|+|++|.|+..+.++..++.|+.|+++.|.|. ..|..+..|.+|-.||..
T Consensus 53 ~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~ 131 (177)
T KOG4579|consen 53 YELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSP 131 (177)
T ss_pred ceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCC
Confidence 578899999999998888854 456899999999999987779999999999999999999 899999999999999999
Q ss_pred cCccccccchhhcCCCccCeeeccCCcccC
Q 005880 144 FNNFSGQIPLTVNHLTHLLTLKLEANRFSG 173 (672)
Q Consensus 144 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 173 (672)
+|.+. .||..+-.-+++-..++.+|.+.+
T Consensus 132 ~na~~-eid~dl~~s~~~al~~lgnepl~~ 160 (177)
T KOG4579|consen 132 ENARA-EIDVDLFYSSLPALIKLGNEPLGD 160 (177)
T ss_pred CCccc-cCcHHHhccccHHHHHhcCCcccc
Confidence 99998 888775544455556667777765
No 498
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.23 E-value=8.7e-07 Score=62.12 Aligned_cols=36 Identities=39% Similarity=0.452 Sum_probs=20.6
Q ss_pred ccceeeccccccCCCCChhhhccCCCCeEecccCccc
Q 005880 112 ALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFS 148 (672)
Q Consensus 112 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 148 (672)
+|++|+|++|+|+ .+|..|++|++|+.|++++|+|+
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4566666666666 55555666666666666666665
No 499
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.22 E-value=1.7e-05 Score=76.68 Aligned_cols=137 Identities=20% Similarity=0.253 Sum_probs=91.3
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchH-------------------HH-----HHHHHHHHcCCC--CCcee
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGK-------------------RE-----FEQHMEVLGRLR--HPNLV 419 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-------------------~~-----~~~e~~~l~~l~--h~niv 419 (672)
..|.+|.-+.||+|...++..+|||+++....... ++ ..+|+.-|.++. +=.+.
T Consensus 54 g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP 133 (268)
T COG1718 54 GCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP 133 (268)
T ss_pred eeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 36888999999999988899999999864322111 11 134555555552 33333
Q ss_pred eeEEEEEcCCeEEEEEeecCCCCh-hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe
Q 005880 420 GLKAYYFAREEKLLVSEYMPNGSL-FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL 498 (672)
Q Consensus 420 ~l~~~~~~~~~~~lv~e~~~~g~L-~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll 498 (672)
+.+++. +..|||||+..... .-.|+ ..++...+...+..++++.+.-|-. ..++||+||+.-|||+
T Consensus 134 ~Pi~~~----~nVLvMEfIg~~g~pAP~Lk------Dv~~e~~e~~~~~~~~v~~~~~l~~---~a~LVHgDLSEyNiL~ 200 (268)
T COG1718 134 EPIAFR----NNVLVMEFIGDDGLPAPRLK------DVPLELEEAEGLYEDVVEYMRRLYK---EAGLVHGDLSEYNILV 200 (268)
T ss_pred Cceeec----CCeEEEEeccCCCCCCCCcc------cCCcCchhHHHHHHHHHHHHHHHHH---hcCcccccchhhheEE
Confidence 444432 45799999955311 11111 1223333567777888888887762 3789999999999999
Q ss_pred CCCCcEEEeccCCCccCC
Q 005880 499 DKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 499 ~~~~~~kl~DfG~a~~~~ 516 (672)
. ++.+.|+|||-|....
T Consensus 201 ~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 201 H-DGEPYIIDVSQAVTID 217 (268)
T ss_pred E-CCeEEEEECccccccC
Confidence 9 8899999999876544
No 500
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.14 E-value=1.6e-05 Score=86.27 Aligned_cols=152 Identities=18% Similarity=0.194 Sum_probs=92.1
Q ss_pred HHHHHHHHh-cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcch------------------------------------
Q 005880 357 LEDLLRASA-EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGG------------------------------------ 399 (672)
Q Consensus 357 ~~~l~~~~~-~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~------------------------------------ 399 (672)
++++...+. +.||.-..|.||+|++++|+.||||+-+..-...
T Consensus 157 ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~ 236 (538)
T KOG1235|consen 157 IEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLP 236 (538)
T ss_pred HHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhH
Confidence 344443333 5788899999999999999999999765321100
Q ss_pred -HHHHHHHHHHHcC----CCCCce---eeeEEEEE-cCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 005880 400 -KREFEQHMEVLGR----LRHPNL---VGLKAYYF-AREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGA 470 (672)
Q Consensus 400 -~~~~~~e~~~l~~----l~h~ni---v~l~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i 470 (672)
+-+|.+|.+-..+ ++|-+. |.+=.+++ -.....|+||||+|..+.+.-.-.+ ..++...+..-+.++
T Consensus 237 ~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~----~gi~~~~i~~~l~~~ 312 (538)
T KOG1235|consen 237 QELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK----RGISPHDILNKLVEA 312 (538)
T ss_pred hhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH----cCCCHHHHHHHHHHH
Confidence 1123444433322 234441 11212222 2457889999999988765532111 124444333333322
Q ss_pred HHHHHHHHhhCCCCCcEecCCCCCCEEeCC----CCcEEEeccCCCccCCCC
Q 005880 471 ARGLAFIHFTCKSLKLTHGNIKSTNVLLDK----TGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 471 a~~L~~LH~~~~~~~iiH~Dlkp~NIll~~----~~~~kl~DfG~a~~~~~~ 518 (672)
..-+-+ ..|++|+|=.|.||+++. ++++.+-|||+.......
T Consensus 313 ~~~qIf------~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 313 YLEQIF------KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred HHHHHH------hcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 221222 358999999999999983 678999999998766543
Done!