Query 005880
Match_columns 672
No_of_seqs 870 out of 5630
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 09:57:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005880.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005880hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 1.4E-53 4.7E-58 442.9 23.2 250 365-643 46-319 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 4E-54 1.4E-58 440.9 16.6 251 364-643 17-289 (299)
3 3omv_A RAF proto-oncogene seri 100.0 5.1E-53 1.8E-57 432.6 22.9 251 364-643 40-300 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 2.5E-53 8.4E-58 436.9 18.2 250 364-642 30-305 (308)
5 3hmm_A TGF-beta receptor type- 100.0 5.1E-52 1.7E-56 428.0 19.4 267 365-644 8-298 (303)
6 4fih_A Serine/threonine-protei 100.0 9.1E-52 3.1E-56 428.6 17.1 239 365-636 79-323 (346)
7 4g3f_A NF-kappa-beta-inducing 100.0 4.3E-51 1.5E-55 422.3 20.7 242 365-643 63-316 (336)
8 3fpq_A Serine/threonine-protei 100.0 2.3E-50 7.8E-55 410.0 23.4 238 366-636 32-282 (290)
9 4b9d_A Serine/threonine-protei 100.0 3.7E-51 1.3E-55 424.6 17.8 240 365-636 29-276 (350)
10 4fie_A Serine/threonine-protei 100.0 5.5E-50 1.9E-54 425.4 21.2 239 365-636 156-400 (423)
11 4ase_A Vascular endothelial gr 100.0 3.2E-50 1.1E-54 420.9 15.5 254 363-644 67-348 (353)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 6E-50 2.1E-54 408.8 16.4 238 364-636 36-284 (311)
13 3hyh_A Carbon catabolite-derep 100.0 3E-49 1E-53 398.2 20.3 237 365-636 18-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 3.7E-49 1.3E-53 403.0 14.6 233 364-631 28-271 (304)
15 4g31_A Eukaryotic translation 100.0 2.1E-47 7.3E-52 391.6 20.2 240 364-636 9-279 (299)
16 4b99_A Mitogen-activated prote 100.0 2.8E-45 9.6E-50 390.2 23.2 249 365-636 59-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 5.8E-45 2E-49 383.7 19.3 186 365-565 26-250 (361)
18 2qkw_B Protein kinase; three-h 100.0 1.1E-43 3.8E-48 370.5 24.7 268 365-646 44-318 (321)
19 3v5w_A G-protein coupled recep 100.0 8.4E-44 2.9E-48 394.3 20.8 241 365-636 194-449 (689)
20 3uto_A Twitchin; kinase, muscl 100.0 1.3E-43 4.6E-48 395.7 21.5 243 364-636 161-410 (573)
21 3soc_A Activin receptor type-2 100.0 6.1E-43 2.1E-47 365.0 20.0 263 365-644 29-319 (322)
22 3uim_A Brassinosteroid insensi 100.0 2.6E-43 9E-48 368.4 16.4 281 352-641 17-309 (326)
23 3s95_A LIMK-1, LIM domain kina 100.0 2.6E-42 8.9E-47 358.3 21.9 248 365-643 15-282 (310)
24 3fxz_A Serine/threonine-protei 100.0 5.6E-42 1.9E-46 353.4 22.8 239 365-636 25-269 (297)
25 3p86_A Serine/threonine-protei 100.0 2.4E-42 8.1E-47 358.2 18.4 254 364-648 41-303 (309)
26 2c30_A Serine/threonine-protei 100.0 4.1E-41 1.4E-45 350.9 26.7 238 366-636 51-294 (321)
27 2psq_A Fibroblast growth facto 100.0 6.2E-42 2.1E-46 364.1 20.6 252 364-644 85-365 (370)
28 4hcu_A Tyrosine-protein kinase 100.0 2.6E-42 8.8E-47 350.6 16.9 246 365-644 15-267 (269)
29 2nru_A Interleukin-1 receptor- 100.0 4.7E-41 1.6E-45 348.2 25.1 271 353-643 13-306 (307)
30 3kul_A Ephrin type-A receptor 100.0 1.1E-41 3.8E-46 355.8 20.5 248 364-644 53-314 (325)
31 3fe3_A MAP/microtubule affinit 100.0 1.6E-41 5.3E-46 354.7 20.7 238 365-636 20-264 (328)
32 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.2E-41 4E-46 345.5 18.6 248 365-646 13-267 (268)
33 3q4u_A Activin receptor type-1 100.0 5.8E-41 2E-45 346.3 22.3 255 365-641 13-300 (301)
34 4f0f_A Serine/threonine-protei 100.0 1.2E-40 4.2E-45 341.6 24.2 247 365-641 24-287 (287)
35 2qol_A Ephrin receptor; recept 100.0 1.5E-41 5.3E-46 361.4 17.7 247 365-644 50-310 (373)
36 1qcf_A Haematopoetic cell kina 100.0 2.3E-41 7.8E-46 369.8 19.1 247 364-644 192-445 (454)
37 1k9a_A Carboxyl-terminal SRC k 100.0 6.2E-41 2.1E-45 365.8 22.0 248 364-646 197-448 (450)
38 3gen_A Tyrosine-protein kinase 100.0 5.7E-41 2E-45 343.3 20.3 246 364-643 28-280 (283)
39 3ugc_A Tyrosine-protein kinase 100.0 1.5E-41 5.2E-46 349.9 16.1 260 365-644 15-292 (295)
40 3cbl_A C-FES, proto-oncogene t 100.0 1.1E-41 3.8E-46 363.4 15.4 247 364-643 118-374 (377)
41 4euu_A Serine/threonine-protei 100.0 1.2E-40 4.2E-45 347.2 22.8 270 365-648 14-314 (319)
42 3kmu_A ILK, integrin-linked ki 100.0 8.4E-41 2.9E-45 339.4 20.9 249 365-643 15-270 (271)
43 3zgw_A Maternal embryonic leuc 100.0 4.5E-41 1.5E-45 353.3 19.0 239 365-637 15-261 (347)
44 3tt0_A Basic fibroblast growth 100.0 1E-40 3.4E-45 356.7 21.0 258 364-650 73-359 (382)
45 2x4f_A Myosin light chain kina 100.0 2.2E-40 7.4E-45 352.4 22.4 241 366-636 95-342 (373)
46 3op5_A Serine/threonine-protei 100.0 7.8E-41 2.7E-45 355.3 18.9 269 365-657 40-343 (364)
47 3niz_A Rhodanese family protei 100.0 5.1E-40 1.7E-44 341.1 24.6 253 365-636 26-300 (311)
48 3lb7_A RAF proto-oncogene seri 100.0 3.7E-40 1.3E-44 341.5 23.4 252 364-644 40-301 (307)
49 4eqm_A Protein kinase; transfe 100.0 2.6E-40 8.7E-45 340.5 22.0 251 365-645 16-277 (294)
50 2zv2_A Calcium/calmodulin-depe 100.0 1.4E-40 4.9E-45 343.1 19.8 240 365-636 18-292 (298)
51 1csn_A Casein kinase-1; phosph 100.0 3.9E-40 1.3E-44 339.6 22.9 262 365-655 15-295 (298)
52 2izr_A Casein kinase I isoform 100.0 1.3E-40 4.5E-45 348.6 19.6 261 365-655 14-293 (330)
53 2eva_A TAK1 kinase - TAB1 chim 100.0 2.6E-40 9E-45 342.7 21.6 250 365-645 13-265 (307)
54 1o6l_A RAC-beta serine/threoni 100.0 2.9E-40 1E-44 346.1 21.7 237 365-636 10-260 (337)
55 1tki_A Titin; serine kinase, m 100.0 2.4E-40 8.1E-45 345.0 20.8 241 365-636 10-257 (321)
56 3t9t_A Tyrosine-protein kinase 100.0 1.7E-40 6E-45 336.5 19.3 246 365-644 13-265 (267)
57 1opk_A P150, C-ABL, proto-onco 100.0 7.4E-41 2.5E-45 369.3 17.8 246 364-642 224-477 (495)
58 1luf_A Muscle-specific tyrosin 100.0 1.2E-40 4E-45 350.8 18.5 250 365-643 52-335 (343)
59 2yab_A Death-associated protei 100.0 4.9E-40 1.7E-44 347.5 23.0 241 365-636 17-272 (361)
60 3l9p_A Anaplastic lymphoma kin 100.0 7.2E-41 2.5E-45 355.7 16.6 250 365-643 76-345 (367)
61 2y0a_A Death-associated protei 100.0 8.7E-40 3E-44 341.7 23.7 242 364-636 15-271 (326)
62 3qup_A Tyrosine-protein kinase 100.0 8.7E-41 3E-45 348.9 15.8 251 364-643 27-298 (323)
63 4fr4_A YANK1, serine/threonine 100.0 4.4E-40 1.5E-44 350.0 21.3 242 365-636 20-271 (384)
64 3vhe_A Vascular endothelial gr 100.0 7.9E-41 2.7E-45 354.5 15.4 252 364-643 26-355 (359)
65 3tki_A Serine/threonine-protei 100.0 1.2E-40 4.2E-45 347.6 16.4 241 365-636 12-261 (323)
66 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.3E-40 4.3E-45 363.6 17.2 247 364-644 188-441 (452)
67 3dtc_A Mitogen-activated prote 100.0 3E-40 1E-44 335.7 18.8 242 365-641 12-271 (271)
68 1mp8_A Focal adhesion kinase 1 100.0 8.6E-41 2.9E-45 341.7 14.6 246 364-643 19-276 (281)
69 1kob_A Twitchin; kinase, intra 100.0 5.4E-40 1.9E-44 350.3 21.0 242 365-636 56-304 (387)
70 3poz_A Epidermal growth factor 100.0 1.7E-40 6E-45 347.2 16.7 245 365-643 20-278 (327)
71 1u5q_A Serine/threonine protei 100.0 2.8E-40 9.5E-45 348.3 18.3 242 365-637 59-306 (348)
72 3mdy_A Bone morphogenetic prot 100.0 1.1E-39 3.6E-44 342.6 22.7 254 364-645 41-333 (337)
73 2ivs_A Proto-oncogene tyrosine 100.0 3.3E-40 1.1E-44 342.8 18.5 252 364-644 27-312 (314)
74 3og7_A AKAP9-BRAF fusion prote 100.0 6.5E-40 2.2E-44 336.7 20.3 251 364-643 28-288 (289)
75 1ob3_A PFPK5, cell division co 100.0 6.7E-40 2.3E-44 336.4 20.3 250 365-636 7-280 (288)
76 2bdw_A Hypothetical protein K1 100.0 1.2E-39 4E-44 345.4 22.7 242 364-636 33-284 (362)
77 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.9E-40 6.5E-45 349.8 16.5 237 365-636 28-280 (353)
78 3soa_A Calcium/calmodulin-depe 100.0 1.3E-39 4.3E-44 353.4 23.4 242 364-636 15-267 (444)
79 1fot_A TPK1 delta, CAMP-depend 100.0 9.5E-40 3.3E-44 339.6 21.3 237 365-636 11-258 (318)
80 2pvf_A Fibroblast growth facto 100.0 2.3E-40 7.8E-45 347.4 16.3 254 364-646 39-321 (334)
81 3ork_A Serine/threonine protei 100.0 4.1E-40 1.4E-44 341.9 17.7 256 365-651 17-289 (311)
82 2pmi_A Negative RE, cyclin-dep 100.0 7.8E-40 2.7E-44 340.7 19.9 255 364-636 9-293 (317)
83 3qd2_B Eukaryotic translation 100.0 9E-40 3.1E-44 342.1 20.4 239 365-636 11-325 (332)
84 3gni_B Strad alpha; kinase fol 100.0 6.1E-40 2.1E-44 351.7 19.5 195 365-566 30-241 (389)
85 2ozo_A Tyrosine-protein kinase 100.0 8.5E-40 2.9E-44 369.4 21.6 243 367-643 343-598 (613)
86 3c1x_A Hepatocyte growth facto 100.0 5E-40 1.7E-44 349.4 18.5 251 365-648 94-360 (373)
87 3o0g_A Cell division protein k 100.0 1.3E-39 4.4E-44 335.0 20.9 251 365-636 7-282 (292)
88 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.4E-40 2.5E-44 342.7 19.2 236 365-636 14-258 (336)
89 1t46_A HOMO sapiens V-KIT hard 100.0 3.9E-40 1.3E-44 342.1 16.9 252 364-643 27-307 (313)
90 4fvq_A Tyrosine-protein kinase 100.0 3.6E-40 1.2E-44 338.3 16.4 246 365-643 13-275 (289)
91 3kn6_A Ribosomal protein S6 ki 100.0 9.9E-40 3.4E-44 341.0 19.9 243 366-635 17-269 (325)
92 1rdq_E PKA C-alpha, CAMP-depen 100.0 8E-40 2.7E-44 344.7 19.3 237 365-636 46-293 (350)
93 3v8s_A RHO-associated protein 100.0 3.2E-40 1.1E-44 354.1 16.4 242 365-636 74-329 (410)
94 3c0i_A Peripheral plasma membr 100.0 6.9E-40 2.4E-44 346.0 18.8 246 363-636 27-286 (351)
95 2buj_A Serine/threonine-protei 100.0 5.8E-40 2E-44 341.6 17.9 257 365-647 34-310 (317)
96 3p1a_A MYT1 kinase, membrane-a 100.0 7.1E-40 2.4E-44 340.1 18.4 236 364-636 61-304 (311)
97 1u59_A Tyrosine-protein kinase 100.0 1.3E-39 4.3E-44 334.2 20.0 244 366-643 16-272 (287)
98 1rjb_A FL cytokine receptor; k 100.0 3.7E-40 1.3E-44 347.2 16.3 253 364-644 49-335 (344)
99 3f3z_A Calcium/calmodulin-depe 100.0 2.5E-39 8.5E-44 330.1 21.8 241 364-636 13-261 (277)
100 2h8h_A Proto-oncogene tyrosine 100.0 3.3E-40 1.1E-44 367.6 16.6 247 364-644 271-524 (535)
101 3is5_A Calcium-dependent prote 100.0 1.6E-39 5.3E-44 333.1 20.2 244 364-636 26-278 (285)
102 4eut_A Serine/threonine-protei 100.0 1.1E-39 3.9E-44 350.1 19.9 266 365-644 14-310 (396)
103 4aw2_A Serine/threonine-protei 100.0 5.8E-40 2E-44 354.8 17.6 245 365-636 79-338 (437)
104 1mqb_A Ephrin type-A receptor 100.0 1.7E-39 5.8E-44 340.5 20.6 247 365-644 49-310 (333)
105 4dc2_A Protein kinase C IOTA t 100.0 6.3E-40 2.1E-44 350.0 17.5 241 365-631 57-307 (396)
106 1qpc_A LCK kinase; alpha beta 100.0 8.6E-40 2.9E-44 333.8 17.8 245 365-643 18-269 (279)
107 3uc3_A Serine/threonine-protei 100.0 1.1E-39 3.8E-44 345.6 19.0 243 365-637 25-275 (361)
108 2y94_A 5'-AMP-activated protei 100.0 2.1E-39 7.1E-44 354.0 21.6 238 365-636 21-266 (476)
109 3hko_A Calcium/calmodulin-depe 100.0 1.2E-39 3.9E-44 343.6 18.9 249 364-636 30-330 (345)
110 2w4o_A Calcium/calmodulin-depe 100.0 1.3E-39 4.6E-44 343.4 19.3 240 365-636 58-305 (349)
111 3a62_A Ribosomal protein S6 ki 100.0 2.2E-39 7.5E-44 338.8 20.5 237 365-636 22-276 (327)
112 4e5w_A Tyrosine-protein kinase 100.0 9E-40 3.1E-44 337.6 17.3 258 365-642 26-301 (302)
113 3kfa_A Tyrosine-protein kinase 100.0 7.4E-40 2.5E-44 335.9 16.2 247 364-643 17-271 (288)
114 3lxl_A Tyrosine-protein kinase 100.0 4.6E-40 1.6E-44 344.0 14.7 263 365-647 28-307 (327)
115 3kex_A Receptor tyrosine-prote 100.0 4.5E-40 1.5E-44 343.8 14.6 245 365-643 18-276 (325)
116 1fvr_A Tyrosine-protein kinase 100.0 2.2E-39 7.4E-44 338.9 19.7 258 365-651 30-308 (327)
117 3lxp_A Non-receptor tyrosine-p 100.0 1.5E-40 5.3E-45 346.2 10.9 257 365-643 36-310 (318)
118 4fl3_A Tyrosine-protein kinase 100.0 1.1E-39 3.8E-44 369.4 18.6 242 366-642 375-630 (635)
119 3uzp_A CKI-delta, CKID, casein 100.0 5.7E-39 1.9E-43 330.6 22.3 262 365-655 14-292 (296)
120 2wqm_A Serine/threonine-protei 100.0 2.5E-39 8.5E-44 335.8 19.7 254 365-645 37-299 (310)
121 2clq_A Mitogen-activated prote 100.0 3.9E-39 1.3E-43 331.6 20.9 244 366-636 28-278 (295)
122 4ejn_A RAC-alpha serine/threon 100.0 1.1E-39 3.7E-44 356.0 17.7 238 364-636 152-404 (446)
123 2i0e_A Protein kinase C-beta I 100.0 1.9E-39 6.6E-44 341.9 19.0 237 365-636 25-276 (353)
124 1b6c_B TGF-B superfamily recep 100.0 5.2E-39 1.8E-43 338.0 22.2 259 364-644 46-337 (342)
125 3pls_A Macrophage-stimulating 100.0 4.6E-39 1.6E-43 331.6 21.3 247 365-643 26-287 (298)
126 1t4h_A Serine/threonine-protei 100.0 1.1E-38 3.7E-43 327.7 23.9 239 365-636 31-282 (290)
127 3ll6_A Cyclin G-associated kin 100.0 6E-40 2.1E-44 344.2 14.7 249 364-645 32-310 (337)
128 3cc6_A Protein tyrosine kinase 100.0 1.8E-39 6.2E-44 331.9 17.8 246 365-644 17-274 (281)
129 2eue_A Carbon catabolite derep 100.0 2.3E-39 8E-44 329.9 18.6 237 365-636 18-262 (275)
130 3brb_A Proto-oncogene tyrosine 100.0 3.3E-39 1.1E-43 335.3 20.0 251 364-643 38-308 (313)
131 1xjd_A Protein kinase C, theta 100.0 9.1E-40 3.1E-44 343.3 15.9 236 365-635 22-268 (345)
132 3g2f_A Bone morphogenetic prot 100.0 5.4E-39 1.9E-43 337.1 21.8 261 365-643 18-318 (336)
133 3gxj_A TGF-beta receptor type- 100.0 3.4E-41 1.2E-45 348.3 4.9 259 365-645 8-299 (303)
134 2ac3_A MAP kinase-interacting 100.0 4.2E-39 1.5E-43 334.9 20.7 253 366-636 19-295 (316)
135 1byg_A CSK, protein (C-termina 100.0 7.3E-40 2.5E-44 334.2 14.5 247 364-645 25-275 (278)
136 4hgt_A Casein kinase I isoform 100.0 4.3E-39 1.5E-43 331.3 20.4 261 365-654 14-291 (296)
137 3dbq_A Dual specificity protei 100.0 4.3E-39 1.5E-43 339.0 20.6 241 365-637 14-274 (343)
138 2zmd_A Dual specificity protei 100.0 6.7E-39 2.3E-43 343.1 22.5 241 365-637 61-321 (390)
139 3lzb_A Epidermal growth factor 100.0 2.3E-39 7.8E-44 338.6 18.4 245 365-643 20-278 (327)
140 3fdn_A Serine/threonine-protei 100.0 4.5E-39 1.6E-43 328.5 20.1 238 365-637 14-258 (279)
141 3a8x_A Protein kinase C IOTA t 100.0 2.7E-39 9.4E-44 340.1 18.9 241 365-631 14-264 (345)
142 2h34_A Serine/threonine-protei 100.0 9.4E-39 3.2E-43 331.3 22.6 250 365-646 39-299 (309)
143 2a2a_A Death-associated protei 100.0 1.2E-38 4E-43 332.4 23.3 242 364-636 16-272 (321)
144 3oz6_A Mitogen-activated prote 100.0 6.5E-39 2.2E-43 343.5 21.9 189 365-565 14-234 (388)
145 3f66_A Hepatocyte growth facto 100.0 3.5E-39 1.2E-43 332.7 19.0 246 365-643 30-291 (298)
146 3cok_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 327.7 19.9 238 365-636 16-262 (278)
147 1xbb_A Tyrosine-protein kinase 100.0 3.5E-39 1.2E-43 331.5 18.6 242 367-643 24-279 (291)
148 2w1i_A JAK2; chromosomal rearr 100.0 1.6E-39 5.4E-44 339.8 16.3 260 364-643 45-322 (326)
149 2v62_A Serine/threonine-protei 100.0 1.3E-39 4.6E-44 343.1 15.6 253 365-642 42-327 (345)
150 4agu_A Cyclin-dependent kinase 100.0 5.5E-39 1.9E-43 333.3 19.5 253 365-636 8-284 (311)
151 2vd5_A DMPK protein; serine/th 100.0 2.4E-39 8.2E-44 347.6 17.2 244 365-636 66-327 (412)
152 2r5t_A Serine/threonine-protei 100.0 2.3E-39 8E-44 343.7 16.8 239 365-638 43-291 (373)
153 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3E-39 1E-43 343.2 17.5 242 365-643 70-339 (365)
154 3llt_A Serine/threonine kinase 100.0 1.3E-38 4.3E-43 337.8 22.1 190 365-565 40-262 (360)
155 1nxk_A MAP kinase-activated pr 100.0 3.9E-39 1.3E-43 346.0 18.4 242 366-637 68-322 (400)
156 1vzo_A Ribosomal protein S6 ki 100.0 1.5E-39 5.3E-44 343.9 14.9 244 365-637 59-322 (355)
157 2jii_A Serine/threonine-protei 100.0 2.4E-39 8.2E-44 342.2 16.2 262 365-654 47-347 (352)
158 3kk8_A Calcium/calmodulin depe 100.0 1.6E-38 5.4E-43 325.3 21.6 241 365-636 11-261 (284)
159 1p4o_A Insulin-like growth fac 100.0 4.2E-39 1.4E-43 335.9 17.4 251 364-643 29-299 (322)
160 2jam_A Calcium/calmodulin-depe 100.0 9.8E-39 3.4E-43 330.3 20.0 241 365-636 14-261 (304)
161 3bhy_A Death-associated protei 100.0 3.7E-38 1.3E-42 322.3 23.9 250 364-644 9-275 (283)
162 2i1m_A Macrophage colony-stimu 100.0 5.8E-40 2E-44 344.1 10.7 252 364-643 50-326 (333)
163 2a19_B Interferon-induced, dou 100.0 7.7E-39 2.6E-43 327.4 18.8 240 365-645 16-276 (284)
164 2y7j_A Phosphorylase B kinase 100.0 1.9E-38 6.5E-43 336.7 22.3 243 365-636 99-359 (365)
165 2xir_A Vascular endothelial gr 100.0 3.9E-39 1.3E-43 335.1 16.6 252 364-643 31-310 (316)
166 3ttj_A Mitogen-activated prote 100.0 1.1E-38 3.8E-43 348.7 20.7 187 365-565 67-266 (464)
167 1cm8_A Phosphorylated MAP kina 100.0 1.4E-38 4.9E-43 337.8 20.6 246 365-636 30-307 (367)
168 3mtl_A Cell division protein k 100.0 7.1E-39 2.4E-43 334.5 17.9 250 365-636 7-281 (324)
169 3dls_A PAS domain-containing s 100.0 6.7E-39 2.3E-43 336.1 17.6 233 365-637 29-275 (335)
170 3i6u_A CDS1, serine/threonine- 100.0 7.8E-39 2.7E-43 346.0 18.6 244 364-636 139-399 (419)
171 2yex_A Serine/threonine-protei 100.0 1.4E-38 4.7E-43 324.2 19.4 242 364-636 11-261 (276)
172 3lij_A Calcium/calmodulin depe 100.0 2.7E-38 9.3E-43 349.4 23.0 241 364-636 41-291 (494)
173 2vgo_A Serine/threonine-protei 100.0 2.9E-38 9.9E-43 323.4 21.4 243 365-642 19-270 (284)
174 3byv_A Rhoptry kinase; malaria 100.0 8.1E-40 2.8E-44 349.1 10.1 243 365-641 78-366 (377)
175 2j7t_A Serine/threonine-protei 100.0 8.9E-39 3.1E-43 330.2 17.5 243 365-636 24-275 (302)
176 2rku_A Serine/threonine-protei 100.0 1.7E-38 5.9E-43 326.8 19.6 238 365-637 20-266 (294)
177 2acx_A G protein-coupled recep 100.0 7.8E-39 2.7E-43 354.2 18.1 243 365-636 189-444 (576)
178 3sv0_A Casein kinase I-like; t 100.0 2.4E-38 8E-43 346.3 21.7 256 365-649 12-284 (483)
179 2h6d_A 5'-AMP-activated protei 100.0 2.4E-38 8.2E-43 322.5 20.3 238 365-636 16-261 (276)
180 3rgf_A Cyclin-dependent kinase 100.0 4.7E-39 1.6E-43 346.6 15.6 194 365-566 26-240 (405)
181 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.5E-39 2.6E-43 335.1 16.7 249 365-636 39-318 (329)
182 3mwu_A Calmodulin-domain prote 100.0 3.6E-38 1.2E-42 347.8 23.0 242 364-637 26-277 (486)
183 3lm5_A Serine/threonine-protei 100.0 1.6E-38 5.5E-43 332.3 19.0 242 366-636 35-287 (327)
184 2owb_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43 333.6 18.8 237 365-636 46-291 (335)
185 3q5i_A Protein kinase; CDPK, m 100.0 3.7E-38 1.3E-42 349.2 22.8 240 365-636 41-301 (504)
186 3g33_A Cell division protein k 100.0 3.7E-38 1.3E-42 326.7 21.3 250 365-636 14-296 (308)
187 3a7i_A MST3 kinase, serine/thr 100.0 2.2E-38 7.4E-43 327.6 19.5 238 365-637 27-271 (303)
188 4aaa_A Cyclin-dependent kinase 100.0 8.6E-39 2.9E-43 335.0 16.7 262 365-636 30-306 (331)
189 1ua2_A CAK, cell division prot 100.0 8.7E-39 3E-43 337.1 16.8 252 364-637 14-292 (346)
190 3q60_A ROP5B; pseudokinase, tr 100.0 1.9E-39 6.6E-44 345.5 11.7 247 365-636 67-352 (371)
191 2qr7_A Ribosomal protein S6 ki 100.0 7.9E-39 2.7E-43 336.2 16.3 241 364-636 26-277 (342)
192 3nyv_A Calmodulin-domain prote 100.0 2.1E-38 7.3E-43 349.6 20.1 241 364-636 30-281 (484)
193 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.5E-38 5.2E-43 351.1 18.8 239 366-631 191-438 (543)
194 2wtk_C Serine/threonine-protei 100.0 2.7E-38 9.3E-43 327.0 19.5 241 365-637 10-264 (305)
195 3an0_A Dual specificity mitoge 100.0 6E-39 2.1E-43 337.4 14.8 245 365-636 56-310 (340)
196 3n9x_A Phosphotransferase; mal 100.0 2.4E-38 8.3E-43 343.6 19.9 189 365-564 31-254 (432)
197 3com_A Serine/threonine-protei 100.0 6.2E-38 2.1E-42 325.8 22.0 239 365-636 34-278 (314)
198 3nsz_A CK II alpha, casein kin 100.0 3.8E-38 1.3E-42 329.9 20.4 184 365-564 41-233 (330)
199 1x8b_A WEE1HU, WEE1-like prote 100.0 4.2E-38 1.4E-42 322.4 20.2 241 364-636 15-279 (289)
200 1u46_A ACK-1, activated CDC42 100.0 8.2E-39 2.8E-43 328.5 15.0 246 365-643 23-284 (291)
201 2yfx_A Tyrosine-protein kinase 100.0 8.9E-39 3.1E-43 334.3 15.5 250 365-643 35-304 (327)
202 3rp9_A Mitogen-activated prote 100.0 3.3E-38 1.1E-42 345.6 20.7 183 365-558 58-280 (458)
203 3mi9_A Cell division protein k 100.0 6.1E-38 2.1E-42 331.3 21.7 252 365-636 22-311 (351)
204 3kvw_A DYRK2, dual specificity 100.0 6.2E-38 2.1E-42 339.8 22.1 190 365-565 102-302 (429)
205 3fme_A Dual specificity mitoge 100.0 2.1E-38 7.2E-43 325.3 17.4 245 365-636 12-266 (290)
206 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.2E-39 2.8E-43 333.1 14.6 250 365-647 38-306 (319)
207 2fst_X Mitogen-activated prote 100.0 2.3E-38 8E-43 335.9 18.1 248 365-636 34-311 (367)
208 2ycf_A Serine/threonine-protei 100.0 4E-38 1.4E-42 328.5 19.4 244 364-636 14-274 (322)
209 1phk_A Phosphorylase kinase; g 100.0 4.8E-38 1.6E-42 324.0 19.6 243 365-636 22-283 (298)
210 2vwi_A Serine/threonine-protei 100.0 6.8E-39 2.3E-43 331.0 13.0 253 365-636 20-287 (303)
211 2pml_X PFPK7, Ser/Thr protein 100.0 2.2E-38 7.6E-43 334.1 17.1 252 365-636 36-322 (348)
212 1wak_A Serine/threonine-protei 100.0 4.1E-38 1.4E-42 338.2 19.2 255 365-636 42-391 (397)
213 2r3i_A Cell division protein k 100.0 8.3E-38 2.9E-42 322.4 20.6 251 365-636 8-283 (299)
214 3eqc_A Dual specificity mitoge 100.0 1.6E-38 5.4E-43 337.0 15.1 190 365-565 38-233 (360)
215 3pg1_A Mitogen-activated prote 100.0 4.9E-38 1.7E-42 333.5 18.7 250 365-636 27-316 (362)
216 2w5a_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 325.5 13.2 244 365-638 11-269 (279)
217 3eb0_A Putative uncharacterize 100.0 4E-38 1.4E-42 336.7 18.0 248 365-636 12-321 (383)
218 3qyz_A Mitogen-activated prote 100.0 1.3E-37 4.4E-42 330.5 21.2 251 365-636 32-313 (364)
219 2x7f_A TRAF2 and NCK-interacti 100.0 7.7E-38 2.6E-42 326.9 19.2 242 365-636 29-286 (326)
220 3pfq_A PKC-B, PKC-beta, protei 100.0 6.1E-38 2.1E-42 357.5 19.6 232 365-631 346-587 (674)
221 2i6l_A Mitogen-activated prote 100.0 4.9E-38 1.7E-42 327.1 17.0 248 365-636 16-305 (320)
222 2xrw_A Mitogen-activated prote 100.0 1.5E-37 5.1E-42 330.7 20.9 258 365-636 30-318 (371)
223 2j0j_A Focal adhesion kinase 1 100.0 8.8E-38 3E-42 355.1 19.3 247 363-643 393-651 (656)
224 4e7w_A Glycogen synthase kinas 100.0 6.4E-38 2.2E-42 336.1 16.9 249 365-636 45-321 (394)
225 1z57_A Dual specificity protei 100.0 2.9E-37 9.8E-42 324.0 21.3 252 365-636 19-328 (339)
226 4exu_A Mitogen-activated prote 100.0 2.1E-37 7.1E-42 329.7 20.1 247 365-636 47-323 (371)
227 1j1b_A Glycogen synthase kinas 100.0 7.6E-38 2.6E-42 338.3 17.0 254 365-642 59-344 (420)
228 2rio_A Serine/threonine-protei 100.0 7.2E-38 2.5E-42 340.0 15.9 245 365-636 20-295 (434)
229 2wei_A Calmodulin-domain prote 100.0 3.2E-37 1.1E-41 316.2 19.7 240 365-636 27-276 (287)
230 3aln_A Dual specificity mitoge 100.0 9.2E-38 3.1E-42 326.6 15.7 249 365-636 27-285 (327)
231 1q8y_A SR protein kinase; tran 100.0 2E-37 6.8E-42 330.1 18.1 255 365-636 24-333 (373)
232 3cek_A Dual specificity protei 100.0 4.1E-37 1.4E-41 319.5 20.0 241 365-637 33-293 (313)
233 1zy4_A Serine/threonine-protei 100.0 2.8E-37 9.6E-42 318.7 18.4 240 365-636 11-283 (303)
234 2b9h_A MAP kinase FUS3, mitoge 100.0 7E-37 2.4E-41 323.4 21.6 248 365-636 16-305 (353)
235 3fhr_A MAP kinase-activated pr 100.0 1.7E-37 5.9E-42 325.6 16.7 242 366-636 35-287 (336)
236 3e3p_A Protein kinase, putativ 100.0 2.6E-37 8.9E-42 327.5 18.2 254 365-636 28-314 (360)
237 2vx3_A Dual specificity tyrosi 100.0 8.5E-37 2.9E-41 326.3 22.3 192 365-565 59-261 (382)
238 3coi_A Mitogen-activated prote 100.0 5.7E-37 2E-41 324.1 19.6 247 365-636 29-305 (353)
239 1blx_A Cyclin-dependent kinase 100.0 1.8E-36 6.1E-41 316.5 21.5 250 365-636 16-296 (326)
240 2dyl_A Dual specificity mitoge 100.0 1.4E-36 4.8E-41 316.0 20.4 243 365-636 30-283 (318)
241 2eu9_A Dual specificity protei 100.0 1.7E-36 5.9E-41 320.3 21.0 190 365-565 24-242 (355)
242 3p23_A Serine/threonine-protei 100.0 6.1E-37 2.1E-41 331.8 17.6 239 365-636 29-283 (432)
243 3a99_A Proto-oncogene serine/t 100.0 2.5E-37 8.7E-42 322.2 11.7 232 365-636 48-293 (320)
244 2iwi_A Serine/threonine-protei 100.0 2.8E-37 9.7E-42 320.6 11.4 232 365-636 36-283 (312)
245 3uqc_A Probable conserved tran 100.0 4.3E-36 1.5E-40 307.4 18.1 228 365-645 36-267 (286)
246 3qa8_A MGC80376 protein; kinas 100.0 4.5E-37 1.5E-41 343.4 10.5 263 364-645 18-311 (676)
247 2pzi_A Probable serine/threoni 100.0 8.2E-36 2.8E-40 342.1 18.7 232 365-641 85-326 (681)
248 3m2w_A MAP kinase-activated pr 100.0 8.4E-36 2.9E-40 307.6 16.7 223 366-636 24-256 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 1E-34 3.6E-39 313.0 15.2 237 365-635 83-362 (413)
250 2vuw_A Serine/threonine-protei 100.0 3.3E-35 1.1E-39 308.4 10.3 240 362-635 22-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 4.7E-30 1.6E-34 286.4 2.5 181 367-562 241-438 (569)
252 1ogq_A PGIP-2, polygalacturona 100.0 1.5E-28 5.2E-33 254.8 12.6 183 23-205 2-198 (313)
253 3rgz_A Protein brassinosteroid 99.9 4.4E-26 1.5E-30 265.1 13.6 188 22-210 7-228 (768)
254 3en9_A Glycoprotease, O-sialog 99.9 2.2E-26 7.5E-31 255.3 4.8 178 365-562 341-538 (540)
255 4eco_A Uncharacterized protein 99.9 1.2E-24 4.3E-29 247.3 6.6 183 26-210 29-335 (636)
256 4ecn_A Leucine-rich repeat pro 99.9 1.5E-24 5.2E-29 251.4 5.4 181 25-210 267-578 (876)
257 4fcg_A Uncharacterized protein 99.9 6.6E-24 2.3E-28 221.2 7.1 186 23-210 23-234 (328)
258 3rgz_A Protein brassinosteroid 99.9 2.2E-22 7.7E-27 233.9 11.0 161 65-225 514-750 (768)
259 1zar_A RIO2 kinase; serine kin 99.9 7.8E-23 2.7E-27 208.0 5.9 139 365-532 95-251 (282)
260 3m19_A Variable lymphocyte rec 99.9 5.9E-21 2E-25 191.0 16.2 152 66-217 36-194 (251)
261 3e6j_A Variable lymphocyte rec 99.8 2E-20 6.7E-25 184.4 14.9 152 45-197 9-175 (229)
262 2o6q_A Variable lymphocyte rec 99.8 7.6E-20 2.6E-24 185.1 17.5 129 66-194 38-170 (270)
263 1ogq_A PGIP-2, polygalacturona 99.8 8.2E-21 2.8E-25 196.5 7.4 158 65-223 125-312 (313)
264 2o6s_A Variable lymphocyte rec 99.8 2.2E-19 7.6E-24 174.1 14.9 145 54-198 6-165 (208)
265 2v70_A SLIT-2, SLIT homolog 2 99.8 4.5E-19 1.6E-23 173.5 14.5 151 69-221 15-172 (220)
266 2xot_A Amphoterin-induced prot 99.8 4.7E-20 1.6E-24 194.8 7.9 166 55-220 18-207 (361)
267 2v70_A SLIT-2, SLIT homolog 2 99.8 1.9E-19 6.5E-24 176.2 11.5 144 55-198 11-170 (220)
268 3rfs_A Internalin B, repeat mo 99.8 7.7E-19 2.6E-23 177.8 16.1 155 64-219 62-222 (272)
269 2v9t_B SLIT homolog 2 protein 99.8 4.8E-19 1.6E-23 173.3 13.9 150 70-221 16-171 (220)
270 2v9t_B SLIT homolog 2 protein 99.8 5.7E-19 1.9E-23 172.8 12.5 142 55-196 11-167 (220)
271 1p9a_G Platelet glycoprotein I 99.8 1.4E-18 4.8E-23 177.5 15.0 155 65-221 55-214 (290)
272 3e6j_A Variable lymphocyte rec 99.8 2.2E-18 7.5E-23 169.7 15.1 158 57-219 14-176 (229)
273 1w8a_A SLIT protein; signaling 99.8 3.2E-19 1.1E-23 170.7 7.1 151 68-220 11-167 (192)
274 1w8a_A SLIT protein; signaling 99.8 1.3E-18 4.3E-23 166.5 9.3 163 55-217 8-185 (192)
275 1ozn_A Reticulon 4 receptor; N 99.8 4.4E-18 1.5E-22 173.5 13.5 156 65-220 80-243 (285)
276 1zth_A RIO1 serine protein kin 99.7 1.7E-18 5.9E-23 173.7 9.6 134 365-515 52-219 (258)
277 3zyi_A Leucine-rich repeat-con 99.7 5.8E-18 2E-22 184.5 14.2 156 66-221 76-309 (452)
278 2z66_A Variable lymphocyte rec 99.7 3.6E-18 1.2E-22 176.0 11.3 158 64-221 100-267 (306)
279 4fcg_A Uncharacterized protein 99.7 3.2E-18 1.1E-22 178.2 10.2 145 65-210 104-258 (328)
280 4g8a_A TOLL-like receptor 4; l 99.7 2.6E-18 8.8E-23 195.3 9.5 142 65-206 52-198 (635)
281 2z62_A TOLL-like receptor 4, v 99.7 1.5E-17 5.2E-22 168.6 13.7 155 65-219 76-241 (276)
282 2z80_A TOLL-like receptor 2, v 99.7 5.9E-18 2E-22 178.2 9.9 161 48-210 23-203 (353)
283 2o6s_A Variable lymphocyte rec 99.7 7.2E-17 2.5E-21 156.3 16.3 150 68-219 10-165 (208)
284 3j0a_A TOLL-like receptor 5; m 99.7 4.5E-18 1.5E-22 199.8 9.3 137 85-221 423-566 (844)
285 2z81_A CD282 antigen, TOLL-lik 99.7 6.7E-18 2.3E-22 188.7 10.3 156 54-210 3-177 (549)
286 3m19_A Variable lymphocyte rec 99.7 4.1E-17 1.4E-21 163.0 14.9 133 65-197 59-195 (251)
287 1ozn_A Reticulon 4 receptor; N 99.7 3E-17 1E-21 167.3 13.6 145 65-209 32-181 (285)
288 3rfs_A Internalin B, repeat mo 99.7 5.5E-17 1.9E-21 164.2 14.8 134 65-198 85-222 (272)
289 2o6q_A Variable lymphocyte rec 99.7 8.3E-17 2.8E-21 162.6 15.8 157 52-210 2-162 (270)
290 3v47_A TOLL-like receptor 5B a 99.7 2.1E-17 7E-22 180.2 11.8 153 53-205 6-178 (455)
291 3zyj_A Leucine-rich repeat-con 99.7 5.1E-17 1.7E-21 176.4 14.3 155 65-221 112-298 (440)
292 2ell_A Acidic leucine-rich nuc 99.7 4.2E-17 1.4E-21 152.2 11.8 134 65-200 24-165 (168)
293 3oja_B Anopheles plasmodium-re 99.7 2.6E-17 9E-22 185.7 11.6 169 44-212 8-202 (597)
294 3vq2_A TLR4, TOLL-like recepto 99.7 2.3E-17 7.8E-22 186.7 11.0 155 66-221 400-564 (606)
295 1p9a_G Platelet glycoprotein I 99.7 5.1E-17 1.8E-21 165.9 12.3 144 65-210 31-177 (290)
296 2o6r_A Variable lymphocyte rec 99.7 8.1E-17 2.8E-21 151.7 12.6 132 55-198 7-141 (177)
297 4ezg_A Putative uncharacterize 99.7 3.7E-17 1.3E-21 156.9 10.3 140 65-208 44-184 (197)
298 2z62_A TOLL-like receptor 4, v 99.7 2.4E-17 8E-22 167.2 9.3 141 65-205 28-173 (276)
299 3o6n_A APL1; leucine-rich repe 99.7 5.3E-17 1.8E-21 173.3 11.4 168 44-212 2-196 (390)
300 2z66_A Variable lymphocyte rec 99.7 5.5E-17 1.9E-21 167.1 10.9 139 55-194 7-163 (306)
301 4b8c_D Glucose-repressible alc 99.7 1.6E-17 5.6E-22 190.7 7.2 177 26-204 131-339 (727)
302 3vq2_A TLR4, TOLL-like recepto 99.7 5.7E-17 1.9E-21 183.5 10.4 141 65-205 32-177 (606)
303 4glp_A Monocyte differentiatio 99.7 9.9E-17 3.4E-21 165.6 11.3 132 66-199 118-268 (310)
304 2je0_A Acidic leucine-rich nuc 99.7 9.4E-17 3.2E-21 146.6 9.4 125 65-190 17-149 (149)
305 2id5_A Lingo-1, leucine rich r 99.7 1.4E-16 4.8E-21 174.8 11.5 154 56-209 12-180 (477)
306 3cvr_A Invasion plasmid antige 99.7 1E-16 3.5E-21 177.7 10.4 151 45-212 33-190 (571)
307 2wfh_A SLIT homolog 2 protein 99.7 3.3E-16 1.1E-20 149.7 12.1 125 69-195 14-140 (193)
308 3v47_A TOLL-like receptor 5B a 99.7 5.9E-16 2E-20 168.6 15.3 133 88-220 275-413 (455)
309 3t6q_A CD180 antigen; protein- 99.7 1.4E-16 4.6E-21 180.4 10.4 144 65-208 33-180 (606)
310 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 3.1E-16 1.1E-20 175.8 13.2 155 64-221 352-516 (562)
311 2z63_A TOLL-like receptor 4, v 99.7 1.6E-16 5.6E-21 178.2 10.7 159 65-223 373-539 (570)
312 4g8a_A TOLL-like receptor 4; l 99.6 2.4E-16 8.3E-21 179.0 11.6 157 65-221 420-586 (635)
313 3j0a_A TOLL-like receptor 5; m 99.6 3.6E-16 1.2E-20 183.5 12.3 158 55-212 14-184 (844)
314 3t6q_A CD180 antigen; protein- 99.6 3.7E-16 1.2E-20 176.8 11.9 138 65-202 376-521 (606)
315 2wfh_A SLIT homolog 2 protein 99.6 1.1E-15 3.8E-20 146.0 13.2 128 91-221 13-145 (193)
316 4ezg_A Putative uncharacterize 99.6 3.6E-16 1.2E-20 150.0 9.5 128 65-195 66-195 (197)
317 2z7x_B TOLL-like receptor 1, v 99.6 2E-16 7E-21 175.5 8.9 154 65-221 324-487 (520)
318 4eco_A Uncharacterized protein 99.6 8.7E-17 3E-21 182.6 5.8 143 65-209 206-381 (636)
319 1wwl_A Monocyte differentiatio 99.6 1.5E-16 5.1E-21 164.4 7.0 134 65-198 95-245 (312)
320 3oja_A Leucine-rich immune mol 99.6 9.8E-17 3.4E-21 176.1 5.6 150 65-219 99-254 (487)
321 2xwt_C Thyrotropin receptor; s 99.6 3.8E-16 1.3E-20 154.7 9.2 139 65-206 31-180 (239)
322 1ziw_A TOLL-like receptor 3; i 99.6 9.3E-16 3.2E-20 176.0 13.8 136 84-220 476-627 (680)
323 1wwl_A Monocyte differentiatio 99.6 2.1E-16 7.3E-21 163.2 7.4 147 66-213 64-239 (312)
324 1xku_A Decorin; proteoglycan, 99.6 1.5E-15 5E-20 158.2 13.7 155 54-212 30-202 (330)
325 3oja_A Leucine-rich immune mol 99.6 2.3E-16 8E-21 173.1 7.9 139 64-209 79-218 (487)
326 1h6t_A Internalin B; cell adhe 99.6 1E-15 3.5E-20 156.3 12.1 142 64-213 67-211 (291)
327 4ecn_A Leucine-rich repeat pro 99.6 2.8E-16 9.6E-21 182.3 8.7 153 55-209 435-623 (876)
328 3zyj_A Leucine-rich repeat-con 99.6 1.3E-15 4.4E-20 165.3 13.3 141 57-198 45-201 (440)
329 3oja_B Anopheles plasmodium-re 99.6 1.1E-15 3.6E-20 172.6 12.8 109 65-173 75-185 (597)
330 4gyi_A RIO2 kinase; protein ki 99.6 3.5E-16 1.2E-20 163.0 7.9 135 364-515 99-265 (397)
331 2ft3_A Biglycan; proteoglycan, 99.6 2.2E-15 7.6E-20 157.0 14.0 153 55-212 33-203 (332)
332 1xeu_A Internalin C; cellular 99.6 1.3E-15 4.5E-20 153.0 11.8 143 65-216 41-186 (263)
333 1h6u_A Internalin H; cell adhe 99.6 2E-15 6.8E-20 155.5 12.8 125 65-195 63-187 (308)
334 2xot_A Amphoterin-induced prot 99.6 2.7E-15 9.3E-20 158.2 13.2 136 59-200 15-154 (361)
335 1h6u_A Internalin H; cell adhe 99.6 1.8E-15 6.1E-20 155.9 11.5 142 65-214 85-229 (308)
336 1ziw_A TOLL-like receptor 3; i 99.6 8E-16 2.7E-20 176.5 9.6 136 65-200 25-164 (680)
337 2id5_A Lingo-1, leucine rich r 99.6 1.3E-15 4.3E-20 167.2 10.8 146 65-210 56-205 (477)
338 4glp_A Monocyte differentiatio 99.6 8.4E-16 2.9E-20 158.6 7.8 140 65-204 91-247 (310)
339 2xwt_C Thyrotropin receptor; s 99.6 2.2E-15 7.4E-20 149.2 10.4 142 65-208 55-208 (239)
340 1h6t_A Internalin B; cell adhe 99.6 3E-15 1E-19 152.9 11.6 138 65-210 46-183 (291)
341 3o6n_A APL1; leucine-rich repe 99.6 3.8E-15 1.3E-19 158.9 12.9 108 65-173 69-179 (390)
342 2z63_A TOLL-like receptor 4, v 99.6 9E-16 3.1E-20 172.2 8.4 143 65-207 28-175 (570)
343 1a9n_A U2A', U2A'; complex (nu 99.6 1E-15 3.6E-20 143.9 7.3 127 65-194 19-153 (176)
344 3o53_A Protein LRIM1, AGAP0063 99.6 1E-15 3.5E-20 158.4 8.0 148 66-218 100-253 (317)
345 1xku_A Decorin; proteoglycan, 99.6 6.9E-15 2.4E-19 153.1 14.3 141 65-209 121-267 (330)
346 1m9s_A Internalin B; cell inva 99.6 7.6E-15 2.6E-19 164.5 15.0 142 64-213 64-208 (605)
347 2je0_A Acidic leucine-rich nuc 99.6 9.7E-16 3.3E-20 139.8 6.4 123 86-210 15-145 (149)
348 2ell_A Acidic leucine-rich nuc 99.6 3.1E-15 1E-19 139.5 9.1 124 85-210 21-152 (168)
349 2ft3_A Biglycan; proteoglycan, 99.6 7.9E-15 2.7E-19 152.8 13.2 140 65-209 102-268 (332)
350 3o53_A Protein LRIM1, AGAP0063 99.6 8.2E-16 2.8E-20 159.2 4.3 156 65-223 120-283 (317)
351 2z7x_B TOLL-like receptor 1, v 99.6 1.6E-15 5.6E-20 168.1 6.7 137 65-205 21-164 (520)
352 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 4.3E-15 1.5E-19 166.4 9.8 137 65-205 52-195 (562)
353 4b8c_D Glucose-repressible alc 99.6 4.9E-16 1.7E-20 178.5 1.6 141 63-205 222-365 (727)
354 3g39_A Variable lymphocyte rec 99.6 1.4E-14 4.8E-19 135.3 11.2 104 68-173 12-116 (170)
355 2z80_A TOLL-like receptor 2, v 99.6 1.5E-14 5E-19 152.1 12.7 149 58-210 26-179 (353)
356 1o6v_A Internalin A; bacterial 99.6 1.1E-14 3.9E-19 159.0 12.1 127 66-198 244-370 (466)
357 2o6r_A Variable lymphocyte rec 99.5 1.7E-14 6E-19 135.6 11.7 111 65-175 28-140 (177)
358 1xeu_A Internalin C; cellular 99.5 1.4E-14 4.8E-19 145.5 11.4 126 64-196 62-187 (263)
359 2z81_A CD282 antigen, TOLL-lik 99.5 1.4E-14 4.8E-19 161.7 12.5 146 61-210 3-153 (549)
360 1dce_A Protein (RAB geranylger 99.5 1.1E-14 3.7E-19 162.2 11.0 104 90-197 443-549 (567)
361 2r9u_A Variable lymphocyte rec 99.5 2.7E-14 9.3E-19 133.8 11.3 104 68-173 15-119 (174)
362 3zyi_A Leucine-rich repeat-con 99.5 3.2E-14 1.1E-18 154.8 12.8 139 69-209 58-200 (452)
363 1ds9_A Outer arm dynein; leuci 99.5 6.5E-17 2.2E-21 155.4 -7.6 142 66-211 19-180 (198)
364 3bz5_A Internalin-J, INLJ; leu 99.5 2.5E-14 8.6E-19 155.5 11.9 138 65-212 148-296 (457)
365 3g39_A Variable lymphocyte rec 99.5 3.6E-14 1.2E-18 132.5 11.3 108 89-198 10-119 (170)
366 3bz5_A Internalin-J, INLJ; leu 99.5 4.8E-14 1.6E-18 153.3 13.9 123 65-198 64-186 (457)
367 1m9s_A Internalin B; cell inva 99.5 2.7E-14 9.3E-19 160.0 12.1 128 63-196 85-212 (605)
368 3g06_A SSPH2 (leucine-rich rep 99.5 1.3E-14 4.4E-19 162.9 9.4 151 45-211 12-170 (622)
369 4fmz_A Internalin; leucine ric 99.5 3.4E-14 1.2E-18 148.8 10.2 142 65-212 199-343 (347)
370 1o6v_A Internalin A; bacterial 99.5 3.5E-14 1.2E-18 155.1 10.5 129 65-200 265-393 (466)
371 1a9n_A U2A', U2A'; complex (nu 99.5 1.8E-14 6.1E-19 135.4 6.4 124 83-210 14-145 (176)
372 4ay9_X Follicle-stimulating ho 99.5 5.4E-14 1.9E-18 147.6 10.7 144 55-198 9-194 (350)
373 3cvr_A Invasion plasmid antige 99.5 8.5E-14 2.9E-18 154.3 12.7 118 65-199 80-197 (571)
374 2r9u_A Variable lymphocyte rec 99.5 1.1E-13 3.8E-18 129.7 11.4 104 90-195 14-119 (174)
375 4fmz_A Internalin; leucine ric 99.5 6.6E-14 2.3E-18 146.6 9.4 136 66-206 156-312 (347)
376 2ifg_A High affinity nerve gro 99.5 1E-13 3.6E-18 145.2 9.8 107 55-173 8-117 (347)
377 1jl5_A Outer protein YOPM; leu 99.4 5.2E-13 1.8E-17 145.0 14.8 131 65-209 111-241 (454)
378 1dce_A Protein (RAB geranylger 99.4 1.9E-13 6.5E-18 152.2 11.0 124 84-210 405-538 (567)
379 1jl5_A Outer protein YOPM; leu 99.4 6.1E-13 2.1E-17 144.4 14.2 136 64-212 90-225 (454)
380 2ast_B S-phase kinase-associat 99.4 2.8E-15 9.6E-20 156.4 -5.1 126 66-191 71-205 (336)
381 3g06_A SSPH2 (leucine-rich rep 99.4 1.9E-12 6.6E-17 145.2 14.7 51 159-212 221-271 (622)
382 2ast_B S-phase kinase-associat 99.4 2E-14 6.7E-19 149.9 -2.1 157 54-212 36-205 (336)
383 2ifg_A High affinity nerve gro 99.4 1.3E-12 4.3E-17 136.9 10.5 105 91-196 11-118 (347)
384 1ds9_A Outer arm dynein; leuci 99.3 2E-14 6.8E-19 137.9 -6.0 126 64-194 47-185 (198)
385 3goz_A Leucine-rich repeat-con 99.3 2.9E-13 9.9E-18 142.7 0.3 134 65-198 22-184 (362)
386 2ca6_A RAN GTPase-activating p 99.3 3.1E-13 1.1E-17 143.8 -1.1 150 64-213 121-314 (386)
387 2ca6_A RAN GTPase-activating p 99.3 3.7E-13 1.3E-17 143.2 -1.2 122 85-206 91-245 (386)
388 4ay9_X Follicle-stimulating ho 99.2 1.3E-11 4.5E-16 129.3 10.1 125 61-190 8-137 (350)
389 3tm0_A Aminoglycoside 3'-phosp 99.2 1.7E-11 5.9E-16 122.8 9.3 136 366-512 20-211 (263)
390 3goz_A Leucine-rich repeat-con 99.2 1.7E-12 6E-17 136.7 2.0 130 69-198 2-155 (362)
391 1z7x_W Ribonuclease inhibitor; 99.1 1.3E-12 4.4E-17 142.4 -4.2 143 64-206 226-399 (461)
392 1nd4_A Aminoglycoside 3'-phosp 99.1 8.4E-11 2.9E-15 117.4 9.5 131 367-513 26-213 (264)
393 3rw6_A Nuclear RNA export fact 99.1 8.1E-13 2.8E-17 131.2 -7.5 155 54-211 77-257 (267)
394 1z7x_W Ribonuclease inhibitor; 99.0 3.1E-12 1E-16 139.4 -6.1 148 65-212 199-380 (461)
395 3dxp_A Putative acyl-COA dehyd 99.0 6.2E-10 2.1E-14 116.9 8.8 142 366-515 44-249 (359)
396 3un9_A NLR family member X1; l 98.9 3.2E-11 1.1E-15 127.0 -3.6 131 65-195 72-225 (372)
397 3un9_A NLR family member X1; l 98.9 7.2E-11 2.5E-15 124.3 -3.2 132 65-196 101-254 (372)
398 3sg8_A APH(2'')-ID; antibiotic 98.9 3.7E-10 1.3E-14 115.7 2.0 181 366-563 26-288 (304)
399 3sb4_A Hypothetical leucine ri 98.8 1.4E-08 4.9E-13 105.1 9.9 53 65-118 101-155 (329)
400 3sb4_A Hypothetical leucine ri 98.7 2.1E-08 7E-13 103.9 8.5 60 64-124 48-137 (329)
401 3ogk_B Coronatine-insensitive 98.7 2.2E-09 7.5E-14 120.6 -0.8 85 110-194 435-526 (592)
402 3r70_A Aminoglycoside phosphot 98.6 1.3E-07 4.4E-12 97.4 9.8 133 366-515 43-238 (320)
403 3d1u_A Putative fructosamine-3 98.5 2.7E-07 9.4E-12 93.2 11.0 141 366-512 21-214 (288)
404 3rw6_A Nuclear RNA export fact 98.5 4.7E-08 1.6E-12 96.9 4.6 100 86-187 139-257 (267)
405 3ogk_B Coronatine-insensitive 98.5 1.2E-08 4E-13 114.7 -1.9 125 66-191 139-280 (592)
406 1io0_A Tropomodulin; LRR prote 98.4 2E-08 6.9E-13 94.6 -0.8 111 84-194 32-164 (185)
407 4gkh_A Aminoglycoside 3'-phosp 98.4 9.3E-07 3.2E-11 88.5 10.5 135 367-513 31-222 (272)
408 3tdw_A Gentamicin resistance p 98.4 1.4E-06 4.6E-11 89.1 11.8 136 366-514 25-224 (306)
409 2p1m_B Transport inhibitor res 98.4 3.4E-08 1.2E-12 110.9 -1.6 108 87-195 371-495 (594)
410 1io0_A Tropomodulin; LRR prote 98.3 5.2E-08 1.8E-12 91.7 -1.1 109 64-172 35-164 (185)
411 3ovc_A Hygromycin-B 4-O-kinase 98.3 2.7E-06 9.2E-11 89.0 10.3 73 366-444 47-122 (362)
412 2ra8_A Uncharacterized protein 98.2 2.4E-07 8.4E-12 96.6 1.8 128 65-194 172-320 (362)
413 3ats_A Putative uncharacterize 98.2 1.5E-06 5.2E-11 90.8 6.4 80 366-445 26-122 (357)
414 2p1m_B Transport inhibitor res 98.0 4.5E-07 1.5E-11 101.7 -0.8 131 65-196 130-304 (594)
415 4fdw_A Leucine rich hypothetic 98.0 1.8E-05 6E-10 83.9 11.0 124 65-194 203-335 (401)
416 2q83_A YTAA protein; 2635576, 98.0 2.6E-05 8.8E-10 80.7 11.7 142 366-512 38-250 (346)
417 2ra8_A Uncharacterized protein 98.0 2.3E-06 7.8E-11 89.2 3.5 130 65-196 139-294 (362)
418 4fdw_A Leucine rich hypothetic 97.9 3.4E-05 1.2E-09 81.7 11.3 122 66-193 158-283 (401)
419 2olc_A MTR kinase, methylthior 97.9 4.6E-05 1.6E-09 80.7 10.7 74 366-441 36-120 (397)
420 3jr1_A Putative fructosamine-3 97.8 0.0001 3.6E-09 74.9 11.5 140 366-510 42-232 (312)
421 3f7w_A Putative fructosamine-3 97.6 0.00012 4.2E-09 73.6 9.4 74 366-443 21-97 (288)
422 2pyw_A Uncharacterized protein 97.5 0.00031 1.1E-08 74.8 11.0 76 483-559 231-313 (420)
423 1zyl_A Hypothetical protein YI 97.3 0.0011 3.8E-08 67.8 11.4 144 367-514 33-223 (328)
424 3dxq_A Choline/ethanolamine ki 97.3 0.00034 1.2E-08 70.9 7.3 141 366-515 24-203 (301)
425 3e4g_A ATP synthase subunit S, 97.2 7.7E-05 2.6E-09 68.5 1.7 83 88-170 61-150 (176)
426 3e4g_A ATP synthase subunit S, 97.2 6.4E-05 2.2E-09 69.0 1.0 81 66-146 62-150 (176)
427 2ppq_A HSK, HK, homoserine kin 97.2 0.002 6.7E-08 65.8 11.7 145 366-513 28-216 (322)
428 3csv_A Aminoglycoside phosphot 97.2 0.0017 6E-08 66.6 11.3 144 367-515 25-218 (333)
429 3rfe_A Platelet glycoprotein I 97.1 0.00057 2E-08 59.6 5.4 36 136-171 32-67 (130)
430 4gt6_A Cell surface protein; l 96.9 0.0017 5.8E-08 68.5 8.7 107 84-193 261-369 (394)
431 3feg_A Choline/ethanolamine ki 96.9 0.0032 1.1E-07 65.7 10.5 143 366-513 56-253 (379)
432 2yle_A Protein spire homolog 1 96.9 0.01 3.4E-07 55.9 12.5 103 441-561 33-135 (229)
433 3rfe_A Platelet glycoprotein I 96.8 0.0019 6.4E-08 56.3 6.4 37 112-148 32-68 (130)
434 3c5i_A Choline kinase; choline 96.8 0.0011 3.7E-08 69.2 5.7 73 366-443 39-121 (369)
435 2qg7_A Ethanolamine kinase PV0 96.6 0.0085 2.9E-07 64.2 10.9 73 366-443 114-188 (458)
436 1nw1_A Choline kinase (49.2 KD 96.5 0.0088 3E-07 63.6 10.7 72 366-443 79-159 (429)
437 1pgv_A TMD-1, tropomodulin TMD 96.5 0.00042 1.4E-08 64.8 0.3 109 85-193 38-169 (197)
438 3i1a_A Spectinomycin phosphotr 96.4 0.0084 2.9E-07 61.6 9.2 32 483-514 205-236 (339)
439 4h09_A Hypothetical leucine ri 96.4 0.017 5.7E-07 60.3 11.4 101 85-188 237-340 (379)
440 4fs7_A Uncharacterized protein 96.2 0.015 5.1E-07 61.1 9.7 120 66-191 231-353 (394)
441 1pgv_A TMD-1, tropomodulin TMD 96.0 0.003 1E-07 59.0 3.0 85 108-192 38-137 (197)
442 4gt6_A Cell surface protein; l 96.0 0.016 5.3E-07 60.9 8.9 97 106-207 260-359 (394)
443 4fs7_A Uncharacterized protein 95.4 0.092 3.1E-06 54.9 12.0 101 84-189 272-374 (394)
444 3f2s_A CK, chetk-alpha, cholin 95.3 0.069 2.4E-06 55.8 10.4 144 366-513 58-279 (401)
445 4h09_A Hypothetical leucine ri 95.1 0.13 4.4E-06 53.4 12.0 107 84-194 213-322 (379)
446 2k1k_A Ephrin type-A receptor 94.8 0.015 5.1E-07 38.0 2.2 32 279-310 6-37 (38)
447 3mes_A Choline kinase; malaria 94.5 0.074 2.5E-06 56.1 8.0 142 366-513 76-290 (424)
448 2ks1_B Epidermal growth factor 94.2 0.024 8.2E-07 38.2 2.3 29 286-314 13-41 (44)
449 2l2t_A Receptor tyrosine-prote 93.9 0.025 8.7E-07 37.9 1.9 30 286-315 12-41 (44)
450 2jwa_A Receptor tyrosine-prote 91.9 0.064 2.2E-06 35.9 1.6 30 285-315 13-42 (44)
451 3g15_A CK, chetk-alpha, cholin 90.4 0.44 1.5E-05 49.9 7.3 29 485-513 245-279 (401)
452 4ano_A ESSB; membrane protein, 85.8 3.9 0.00013 38.4 9.6 114 414-563 48-163 (219)
453 4ann_A ESSB; membrane protein, 85.4 3 0.0001 39.0 8.6 117 413-563 42-158 (215)
454 3cxl_A N-chimerin; SH2, RHO-GA 75.2 0.25 8.5E-06 52.8 -2.9 58 366-426 148-214 (463)
455 2l34_A TYRO protein tyrosine k 55.3 5.5 0.00019 24.9 1.6 25 282-306 5-29 (33)
456 2ks1_B Epidermal growth factor 52.9 9.8 0.00033 25.5 2.6 32 286-317 10-41 (44)
457 2l2t_A Receptor tyrosine-prote 50.5 11 0.00037 25.2 2.5 33 286-318 9-41 (44)
458 2l8s_A Integrin alpha-1; trans 40.4 12 0.0004 26.3 1.5 30 287-316 10-39 (54)
459 1cja_A Protein (actin-fragmin 39.0 1.7E+02 0.0057 29.2 10.2 134 368-514 77-237 (342)
460 2knc_A Integrin alpha-IIB; tra 34.6 16 0.00054 25.6 1.4 29 283-311 13-41 (54)
461 2klu_A T-cell surface glycopro 32.5 38 0.0013 24.6 3.1 11 289-299 12-22 (70)
462 3ox7_P MH027; urokinase-type p 28.2 13 0.00045 19.9 0.1 9 53-61 6-14 (23)
463 2lz0_A Uncharacterized protein 22.2 1.8E+02 0.0063 22.9 6.0 13 107-119 16-28 (100)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-53 Score=442.92 Aligned_cols=250 Identities=27% Similarity=0.386 Sum_probs=203.3
Q ss_pred hcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.++||+|+||.||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+||||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 125 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM 125 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 478999999999999864 47899999998877667789999999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEec
Q 005880 439 PNGSLFWLLHGNRGP----------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSD 508 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 508 (672)
++|+|.++++..... ...+++|.++++|+.|||+||+||| +.+||||||||+|||+++++++||+|
T Consensus 126 ~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA----GLHFVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEETTTEEEECC
T ss_pred CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh----cCCeecccccHhhEEECCCCcEEEcc
Confidence 999999999865321 2346999999999999999999999 78999999999999999999999999
Q ss_pred cCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChh
Q 005880 509 FGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLP 580 (672)
Q Consensus 509 fG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~ 580 (672)
||+++..... ...+|+.|||||++. +..++.++|||||||++|||+| |+.||... ...
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~--~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~------------~~~ 267 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL--YRKFTTESDVWSFGVVLWEIFTYGKQPWYQL------------SNT 267 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHT--TCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS------------CHH
T ss_pred cccceeccCCCcceecCcccccccccChhhhc--CCCCCccccccchHHHHHHHHcCCCCCCCCC------------CHH
Confidence 9999865432 345788999999765 5689999999999999999999 89999643 223
Q ss_pred HHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 581 RWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 581 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
+.+..+..... ...+ .....++.+|+.+||+.||++||||.||++.|+.+.+
T Consensus 268 ~~~~~i~~g~~--------~~~p---~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 268 EAIDCITQGRE--------LERP---RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHHHHHHTCC--------CCCC---TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCC--------CCCc---ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 33333322211 1111 1223467888999999999999999999999999875
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4e-54 Score=440.86 Aligned_cols=251 Identities=27% Similarity=0.395 Sum_probs=206.4
Q ss_pred HhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
+.+.||+|+||.||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..++||||
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence 3578999999999999864 4788999999877766778999999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEecc
Q 005880 438 MPNGSLFWLLHGNR--------GPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDF 509 (672)
Q Consensus 438 ~~~g~L~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 509 (672)
|++|+|.++|+... ......++|.++++|+.|+|+||+||| +++||||||||+|||+++++++||+||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA----SQHFVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCccCHhhEEECCCCcEEECCc
Confidence 99999999997642 123356999999999999999999999 789999999999999999999999999
Q ss_pred CCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhH
Q 005880 510 GLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPR 581 (672)
Q Consensus 510 G~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~ 581 (672)
|+|+..... ...+|..|||||++. +..++.++|||||||++|||+| |+.||... ...+
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~--~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~------------~~~~ 238 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIM--YRKFTTESDVWSLGVVLWEIFTYGKQPWYQL------------SNNE 238 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS------------CHHH
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHc--CCCCCchhhHHHHHHHHHHHHcCCCCCCCCC------------CHHH
Confidence 999765432 234688999999875 4689999999999999999999 89999643 2233
Q ss_pred HHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 582 WVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 582 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.+..+...... ..+ .....++.+++.+||+.||++||||.||++.|+++.+
T Consensus 239 ~~~~i~~~~~~--------~~p---~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 239 VIECITQGRVL--------QRP---RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HHHHHHHTCCC--------CCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCC--------CCC---ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 33333332211 011 1233467889999999999999999999999999874
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.1e-53 Score=432.60 Aligned_cols=251 Identities=26% Similarity=0.409 Sum_probs=200.4
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.+.||+|+||+||+|++++ .||||+++... ....++|.+|++++++++|||||+++|++. ++..+||||||++|
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gG 116 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCC
Confidence 45789999999999999763 59999987433 334578999999999999999999999875 45689999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC----
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP---- 517 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~---- 517 (672)
+|.++|+... .+++|.++..|+.|||+||+||| +.+||||||||+|||+++++++||+|||+|+....
T Consensus 117 sL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH----~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 117 SLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLH----AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp BHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 9999997543 45999999999999999999999 78999999999999999999999999999986543
Q ss_pred ---CCCCCCCcccCCCccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 518 ---STVPRSNGYRAPELSSSD-GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 518 ---~~~~~t~~y~aPE~l~~~-~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
....||+.|||||++... ...++.++|||||||++|||+||+.||.... ....+.........
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~------------~~~~~~~~~~~~~~- 255 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN------------NRDQIIFMVGRGYA- 255 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC------------CHHHHHHHHHTTCC-
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC------------hHHHHHHHHhcCCC-
Confidence 145789999999987543 4568999999999999999999999996432 12222223322211
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.+.... ........+.+++.+||+.||++||||.||++.|+.++.
T Consensus 256 ---~p~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 256 ---SPDLSK--LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp ---CCCSTT--SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred ---CCCccc--ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 111111 011233467888999999999999999999999998864
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.5e-53 Score=436.87 Aligned_cols=250 Identities=24% Similarity=0.313 Sum_probs=203.6
Q ss_pred HhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
+.+.||+|+||+||+|++. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+++..++|||
T Consensus 30 ~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEE
Confidence 3578999999999999963 468899999975433 346789999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEE
Q 005880 437 YMPNGSLFWLLHGNRGP-----------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNAR 505 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~k 505 (672)
||++|+|.++|+..... ....++|.++++|+.|||+||+||| +.+||||||||+|||+++++++|
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDLK~~NILl~~~~~~K 185 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS----SHHVVHKDLATRNVLVYDKLNVK 185 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH----hCCCCCCCccccceEECCCCCEE
Confidence 99999999999754311 1246999999999999999999999 78999999999999999999999
Q ss_pred EeccCCCccCCC-------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCC
Q 005880 506 VSDFGLSIFAPP-------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAV 577 (672)
Q Consensus 506 l~DfG~a~~~~~-------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~ 577 (672)
|+|||+++.... ....+|..|||||++. +..++.++|||||||++|||+| |+.||...
T Consensus 186 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~--~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~------------ 251 (308)
T 4gt4_A 186 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY------------ 251 (308)
T ss_dssp ECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC------------
T ss_pred ECCcccceeccCCCceeEecccccCCcccCHHHHh--CCCCCccchhhhHHHHHHHHHhCCCCCCCCC------------
Confidence 999999986532 2356788999999775 4689999999999999999999 89999643
Q ss_pred ChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 578 DLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
...+.+..+..... .. ..+.+...+.+++.+||+.||++||||.||++.|+.+.
T Consensus 252 ~~~~~~~~i~~~~~-~~----------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 252 SNQDVVEMIRNRQV-LP----------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp CHHHHHHHHHTTCC-CC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CHHHHHHHHHcCCC-CC----------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 22233333322211 11 11223456788999999999999999999999998754
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.1e-52 Score=428.00 Aligned_cols=267 Identities=22% Similarity=0.294 Sum_probs=200.1
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC----eEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE----EKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|++. |+.||||+++.... ....++.|+..+.+++|||||+++|++.+++ ..+||||||++
T Consensus 8 ~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEEC-CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 478999999999999985 89999999975432 2233455666777899999999999998654 57999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC----CCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC----KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|+|.++++.. +++|..+.+|+.|+|+||+|||+.+ .+.+||||||||+|||+++++++||+|||+|+...
T Consensus 86 gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 86 GSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 9999999854 3899999999999999999999431 13499999999999999999999999999997653
Q ss_pred CC---------CCCCCCcccCCCccccC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCC-CCC--CCCCChh
Q 005880 517 PS---------TVPRSNGYRAPELSSSD----GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAG-MGC--GGAVDLP 580 (672)
Q Consensus 517 ~~---------~~~~t~~y~aPE~l~~~----~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~-~~~--~~~~~~~ 580 (672)
.. ...||+.|||||++... ...+++++|||||||++|||+||++||........ +.. .......
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 32 34689999999987532 12467899999999999999999998865433211 100 0111222
Q ss_pred HHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 581 RWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 581 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
.+......+ ..++.........+....+.+++.+||+.||++||||.||++.|+++.+.
T Consensus 240 ~~~~~~~~~-----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 240 EMRKVVCEQ-----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHTTS-----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHhcc-----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 222222221 12222211111234566788999999999999999999999999998754
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=9.1e-52 Score=428.58 Aligned_cols=239 Identities=20% Similarity=0.328 Sum_probs=199.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||.||+|+.. +|+.||||+++.......+.+.+|+++|++++|||||++++++.+++..|||||||++|+|
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 158 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEH
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcH
Confidence 367999999999999965 6999999999765555667789999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++... .+++.++..|+.||+.||+||| +.+||||||||+|||++.++++||+|||+|+.....
T Consensus 159 ~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 228 (346)
T 4fih_A 159 TDIVTHT------RMNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228 (346)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred HHHHHcC------CCCHHHHHHHHHHHHHHHHHHH----HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence 9999753 3899999999999999999999 789999999999999999999999999999876432
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...||+.|||||++. +..|+.++|||||||++|||++|+.||.... ..+.+..+... .. +
T Consensus 229 ~~~GTp~YmAPEvl~--~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------------~~~~~~~i~~~-~~-----~ 288 (346)
T 4fih_A 229 SLVGTPYWMAPELIS--RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------------PLKAMKMIRDN-LP-----P 288 (346)
T ss_dssp CCCSCGGGCCHHHHT--TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------------HHHHHHHHHHS-SC-----C
T ss_pred ccccCcCcCCHHHHC--CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------------HHHHHHHHHcC-CC-----C
Confidence 567999999999875 5678999999999999999999999996432 22222222221 11 1
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... .....++.+++.+||+.||++|||+.|+++
T Consensus 289 ~~~~~---~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 289 RLKNL---HKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp CCSCG---GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCcc---ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111 122335678888999999999999999864
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.3e-51 Score=422.28 Aligned_cols=242 Identities=22% Similarity=0.273 Sum_probs=197.7
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.++||+|+||.||+|+.. +|+.||||+++.... ..+|++++++++|||||++++++.+++..|||||||++|+|
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 467999999999999964 699999999975432 24799999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC-cEEEeccCCCccCCCC----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG-NARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~-~~kl~DfG~a~~~~~~---- 518 (672)
.++++.. .++++.++..|+.||++||+||| +.+||||||||+|||++.++ ++||+|||+|+.....
T Consensus 138 ~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 138 GQLIKQM-----GCLPEDRALYYLGQALEGLEYLH----TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 9999754 35999999999999999999999 88999999999999999987 6999999999876432
Q ss_pred ------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 519 ------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 519 ------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
...||+.|||||++. +..++.++|||||||++|||+||+.||......+ + ...+..+...
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~--~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~---------~---~~~i~~~~~~ 274 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVM--GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP---------L---CLKIASEPPP 274 (336)
T ss_dssp -----CCCCCCGGGCCHHHHT--TCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC---------C---HHHHHHSCCG
T ss_pred ceecCCccccCccccCHHHHC--CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---------H---HHHHHcCCCC
Confidence 346899999999875 5679999999999999999999999997543221 1 1222222110
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.. ...+. ....+.+++.+||+.||++|||+.|+++.|....+
T Consensus 275 ~~------~~~~~---~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 275 IR------EIPPS---CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp GG------GSCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ch------hcCcc---CCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 00 01111 22356778889999999999999999998877654
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-50 Score=410.00 Aligned_cols=238 Identities=25% Similarity=0.420 Sum_probs=191.4
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEc----CCeEEEEEeec
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFA----REEKLLVSEYM 438 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 438 (672)
+.||+|+||.||+|... ++..||||++.... ....+.|.+|++++++++|||||++++++.+ ++..++|||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 57999999999999965 68999999997543 2345679999999999999999999999865 34578999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC--cEecCCCCCCEEeCC-CCcEEEeccCCCccC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK--LTHGNIKSTNVLLDK-TGNARVSDFGLSIFA 515 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~--iiH~Dlkp~NIll~~-~~~~kl~DfG~a~~~ 515 (672)
++|+|.++++.. ..+++..+..|+.||++||+||| +++ ||||||||+|||++. ++.+||+|||+|+..
T Consensus 112 ~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH----~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 112 TSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH----TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp CSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred CCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 999999999754 35999999999999999999999 555 999999999999984 799999999999865
Q ss_pred CCC---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 516 PPS---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 516 ~~~---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
... ...||+.|||||++. ..++.++|||||||++|||+||+.||.... ........+. ....
T Consensus 183 ~~~~~~~~~GTp~YmAPE~~~---~~y~~~~DiwSlGvilyelltg~~Pf~~~~-----------~~~~~~~~i~-~~~~ 247 (290)
T 3fpq_A 183 RASFAKAVIGTPEFMAPEMYE---EKYDESVDVYAFGMCMLEMATSEYPYSECQ-----------NAAQIYRRVT-SGVK 247 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGG---TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----------SHHHHHHHHT-TTCC
T ss_pred CCCccCCcccCccccCHHHcC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----------cHHHHHHHHH-cCCC
Confidence 543 567999999999874 358999999999999999999999996421 2222222222 2111
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
...++ .. ...++.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~------~~---~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 248 PASFD------KV---AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CGGGG------GC---CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCC------cc---CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11111 11 1234678888999999999999999874
No 9
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.7e-51 Score=424.65 Aligned_cols=240 Identities=22% Similarity=0.384 Sum_probs=195.8
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|++++++++|||||++++++.+++..|+|||||++|
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg 108 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG 108 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 47899999999999995 4699999999975432 34578999999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++.... ...+++.+++.|+.||+.||+||| +.+||||||||+|||+++++++||+|||+|+.....
T Consensus 109 ~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 181 (350)
T 4b9d_A 109 DLFKRINAQK---GVLFQEDQILDWFVQICLALKHVH----DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181 (350)
T ss_dssp BHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHH----HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred cHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence 9999997543 245799999999999999999999 789999999999999999999999999999877643
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...||+.|||||++. +..|+.++|||||||++|||+||+.||... +..+.+..+.......
T Consensus 182 ~~~~~GT~~YmAPE~l~--~~~y~~~~DiwSlGvilyemltG~~PF~~~------------~~~~~~~~i~~~~~~~--- 244 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICE--NKPYNNKSDIWALGCVLYELCTLKHAFEAG------------SMKNLVLKIISGSFPP--- 244 (350)
T ss_dssp HHHHHSCCTTCCHHHHT--TCCCCHHHHHHHHHHHHHHHHHSSCSCCCS------------SHHHHHHHHHHTCCCC---
T ss_pred ccccCCCccccCHHHHC--CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------------CHHHHHHHHHcCCCCC---
Confidence 356899999999875 567999999999999999999999999643 3344444444433210
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.... ...++.+|+.+||+.||++|||+.|+++
T Consensus 245 -----~~~~---~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 245 -----VSLH---YSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp -----CCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----CCcc---CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0111 2235778888999999999999999976
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=5.5e-50 Score=425.37 Aligned_cols=239 Identities=20% Similarity=0.334 Sum_probs=199.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||.||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|||||||++|+|
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L 235 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcH
Confidence 468999999999999965 6999999999766555667899999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.++++.. .+++.++..|+.||++||+||| +.+||||||||+|||++.+|.+||+|||+|+.....
T Consensus 236 ~~~i~~~------~l~e~~~~~~~~qil~aL~ylH----~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 305 (423)
T 4fie_A 236 TDIVTHT------RMNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305 (423)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred HHHHhcc------CCCHHHHHHHHHHHHHHHHHHH----HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc
Confidence 9999754 3899999999999999999999 789999999999999999999999999999876442
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...||+.|||||++. +..|+.++|||||||++|||++|+.||.... ..+.+..+... . .+
T Consensus 306 ~~~GTp~YmAPEvl~--~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------------~~~~~~~i~~~-~-----~~ 365 (423)
T 4fie_A 306 SLVGTPYWMAPELIS--RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------------PLKAMKMIRDN-L-----PP 365 (423)
T ss_dssp CCEECTTTCCHHHHT--TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------------HHHHHHHHHHS-C-----CC
T ss_pred ccccCcCcCCHHHHC--CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------------HHHHHHHHHcC-C-----CC
Confidence 456899999999875 5678999999999999999999999996432 22222222221 1 11
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.......+ ..++.+|+.+||..||++|||+.|+++
T Consensus 366 ~~~~~~~~---s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 366 RLKNLHKV---SPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp CCSCTTSS---CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCcccccC---CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111222 235677888999999999999999864
No 11
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.2e-50 Score=420.93 Aligned_cols=254 Identities=25% Similarity=0.331 Sum_probs=203.8
Q ss_pred HHhcccCcCCeEEEEEEEEcC------CcEEEEEEcccCCc-chHHHHHHHHHHHcCCCC-CceeeeEEEEEcC-CeEEE
Q 005880 363 ASAEMLGKGGFGTAYKAVLDD------GSVVAVKRLKDASI-GGKREFEQHMEVLGRLRH-PNLVGLKAYYFAR-EEKLL 433 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~-~~~~l 433 (672)
.+.+.||+|+||.||+|++.. ++.||||+++.... ...++|.+|+++|.+++| ||||+++|+|.++ +..++
T Consensus 67 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~i 146 (353)
T 4ase_A 67 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 146 (353)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEE
T ss_pred EEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEE
Confidence 346789999999999999542 36899999986543 345789999999999965 8999999999764 56899
Q ss_pred EEeecCCCChhHHhhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC
Q 005880 434 VSEYMPNGSLFWLLHGNRG-----------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG 502 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~ 502 (672)
|||||++|+|.++|+.... .....++|.++..|+.|||+||+||| +.+||||||||+|||+++++
T Consensus 147 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH----~~~iiHRDLK~~NILl~~~~ 222 (353)
T 4ase_A 147 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSEKN 222 (353)
T ss_dssp EEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGG
T ss_pred EEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh----hCCeecCccCccceeeCCCC
Confidence 9999999999999976431 12345899999999999999999999 78999999999999999999
Q ss_pred cEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCC
Q 005880 503 NARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCG 574 (672)
Q Consensus 503 ~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~ 574 (672)
.+||+|||+|+..... ...+|..|||||++. +..++.++|||||||++|||+| |+.||....
T Consensus 223 ~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~--~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~-------- 292 (353)
T 4ase_A 223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------- 292 (353)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC--------
T ss_pred CEEECcchhhhhcccCCCceeeccccccccccCHHHHh--cCCCCCcccEeehHHHHHHHHhCCCCCCCCCC--------
Confidence 9999999999876443 234678899999875 4689999999999999999998 899996432
Q ss_pred CCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 575 GAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
..+.+...+.++.... .+ +....++.+++.+||+.||++||||.||++.|+++.+.
T Consensus 293 ----~~~~~~~~i~~g~~~~-------~p---~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 293 ----IDEEFCRRLKEGTRMR-------AP---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp ----CSHHHHHHHHHTCCCC-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHcCCCCC-------CC---ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 1222333333322111 11 12234578889999999999999999999999998753
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=6e-50 Score=408.77 Aligned_cols=238 Identities=20% Similarity=0.311 Sum_probs=198.9
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
+.+.||+|+||+||+|+. .+|+.||||++.+.. ....+.+.+|+++|++++|||||++++++.+++..|+||||++
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 357899999999999995 469999999997532 2245789999999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|.+++... ..+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 116 gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH----~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 116 NGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 99999999754 35999999999999999999999 789999999999999999999999999999876432
Q ss_pred ------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 519 ------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 519 ------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
...||+.|||||++. +..|+.++||||+||++|||+||+.||... +..+.+..+......
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~--~~~y~~~~DiWSlGvilyeml~G~~PF~~~------------~~~~~~~~i~~~~~~ 252 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLT--EKSACKSSDLWALGCIIYQLVAGLPPFRAG------------NEGLIFAKIIKLEYD 252 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHH--HSCBCHHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHTCCC
T ss_pred CcccccCcccCcccCCHHHHc--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------------CHHHHHHHHHcCCCC
Confidence 457999999999875 457899999999999999999999999643 233344444433210
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+ .... ..++.+++.+||+.||++|||++|++.
T Consensus 253 ---~------p~~~---s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 253 ---F------PEKF---FPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp ---C------CTTC---CHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred ---C------Cccc---CHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 0 1112 234677888999999999999999753
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3e-49 Score=398.25 Aligned_cols=237 Identities=24% Similarity=0.371 Sum_probs=184.9
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||+||+|+. .+|+.||||++++... ...+.+.+|++++++++|||||++++++.+++..|+||||+ +
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~ 96 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-C
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-C
Confidence 47899999999999995 4799999999975432 23567999999999999999999999999999999999999 6
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... .++++.++..++.|++.||+||| +++|+||||||+|||+++++++||+|||+|+.....
T Consensus 97 g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH----~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 97 NELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCH----RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 8999999754 35999999999999999999999 789999999999999999999999999999876543
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...||+.|+|||++... ..++.++||||+||++|||+||+.||... +.....+.+......
T Consensus 168 ~~~~~GT~~Y~APE~~~~~-~y~~~~~DiwSlGvily~lltg~~PF~~~------------~~~~~~~~i~~~~~~---- 230 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGK-LYAGPEVDVWSCGVILYVMLCRRLPFDDE------------SIPVLFKNISNGVYT---- 230 (275)
T ss_dssp -------CTTSCHHHHSSS-SCCCTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHTCCC----
T ss_pred cCCeeECcccCChhhhcCC-CCCCChhhhHHHHHHHHHHHHCCCCCCCC------------CHHHHHHHHHcCCCC----
Confidence 56789999999987532 23468999999999999999999999642 233334333332210
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... ..++.+++.+||+.||++|||+.|+++
T Consensus 231 -----~p~~~---s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 231 -----LPKFL---SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----CCTTS---CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -----CCCCC---CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 01112 234677888999999999999999976
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.7e-49 Score=403.04 Aligned_cols=233 Identities=24% Similarity=0.338 Sum_probs=186.9
Q ss_pred HhcccCcCCeEEEEEEEEc----CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVLD----DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
+.+.||+|+||+||+|+.. +++.||||++++... .....+.+|++++++++|||||++++++.+++..|+||||
T Consensus 28 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy 107 (304)
T 3ubd_A 28 LLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDF 107 (304)
T ss_dssp EEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECC
T ss_pred EEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEc
Confidence 4578999999999999852 478999999975432 2345788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+|||+++++++||+|||+|+....
T Consensus 108 ~~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 108 LRGGDLFTRLSKEV-----MFTEEDVKFYLAELALALDHLH----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp CTTCEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred CCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 99999999997543 5999999999999999999999 78999999999999999999999999999986532
Q ss_pred -----CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 518 -----STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 518 -----~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
....||+.|||||++. +..++.++||||+||++|||+||+.||... +..+.+..+.+...
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~--~~~y~~~~DiwSlGvilyemltG~~PF~~~------------~~~~~~~~i~~~~~- 243 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVN--RRGHTQSADWWSFGVLMFEMLTGTLPFQGK------------DRKETMTMILKAKL- 243 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHH--TSCCCTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHCCC-
T ss_pred CCccccccccCcccCCHHHhc--cCCCCCCCcccchHHHHHHHHhCCCCCCCc------------CHHHHHHHHHcCCC-
Confidence 2567899999999875 467899999999999999999999999643 33334444433221
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM 631 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 631 (672)
..+... ..++.+++.+||+.||++|||+
T Consensus 244 --------~~p~~~---s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 --------GMPQFL---SPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp --------CCCTTS---CHHHHHHHHHHTCSSGGGSTTC
T ss_pred --------CCCCcC---CHHHHHHHHHHcccCHHHCCCC
Confidence 011112 2346778889999999999996
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.1e-47 Score=391.62 Aligned_cols=240 Identities=23% Similarity=0.355 Sum_probs=182.7
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCC------------
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFARE------------ 429 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------------ 429 (672)
..+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 9 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CE
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCc
Confidence 3478999999999999964 689999999975433 34567999999999999999999999987544
Q ss_pred eEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEecc
Q 005880 430 EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDF 509 (672)
Q Consensus 430 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 509 (672)
..|+||||+++|+|.+++..... ....++..++.|+.|+++||+||| +.+|+||||||+|||++.++.+||+||
T Consensus 89 ~l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH----~~~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 89 YLYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp EEEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHH----HCcCccccCcHHHeEECCCCcEEEccC
Confidence 36899999999999999986532 234677889999999999999999 789999999999999999999999999
Q ss_pred CCCccCCCC-----------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 005880 510 GLSIFAPPS-----------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG 572 (672)
Q Consensus 510 G~a~~~~~~-----------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~ 572 (672)
|+|+..... ...||+.|||||++. +..|+.++|||||||++|||++ ||...
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~--~~~y~~~~DiwSlGvilyell~---Pf~~~------- 230 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH--GNSYSHKVDIFSLGLILFELLY---PFSTQ------- 230 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHT--TCCCCTHHHHHHHHHHHHHHHS---CCSSH-------
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHc--CCCCCCHHHHHHHHHHHHHHcc---CCCCc-------
Confidence 999866432 246899999999875 5689999999999999999996 77421
Q ss_pred CCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 573 CGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.+....+.... ... + .+..........+++.+||+.||++|||+.|+++
T Consensus 231 ----~~~~~~~~~~~-~~~----~------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 231 ----MERVRTLTDVR-NLK----F------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp ----HHHHHHHHHHH-TTC----C------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----cHHHHHHHHHh-cCC----C------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01111111111 110 0 1111223345667899999999999999999875
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-45 Score=390.18 Aligned_cols=249 Identities=21% Similarity=0.296 Sum_probs=191.7
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEc------CCeEEEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFA------REEKLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~~~lv~ 435 (672)
.+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.. .+..|+||
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivm 138 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEE
Confidence 478999999999999964 799999999975432 345678899999999999999999999764 35789999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
|||+ |+|.+++... .++++.++..|+.||+.||+||| +.+||||||||+|||++.++.+||+|||+|+..
T Consensus 139 E~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH----~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 139 DLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMH----SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp ECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred eCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 9995 6899999754 35999999999999999999999 789999999999999999999999999999865
Q ss_pred CC---------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 516 PP---------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 516 ~~---------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
.. ....||+.|+|||++.. ...++.++||||+||++|||++|++||.+.. ..+.+..+
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~-~~~~~~~~DiWSlG~il~ell~G~~pF~g~~------------~~~~l~~I 275 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLS-LHEYTQAIDLWSVGCIFGEMLARRQLFPGKN------------YVHQLQLI 275 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTT-CSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS------------HHHHHHHH
T ss_pred ccCccccccccccceeChHhcCHHHhcC-CCCCCChhheehhHHHHHHHHHCCCCCCCCC------------HHHHHHHH
Confidence 32 24678999999998653 2467999999999999999999999997542 22222222
Q ss_pred Hhhhcccc--ccc-----------hhhc--cccChH----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 587 VREEWTAE--VFD-----------LELM--RYKDIE----EEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 587 ~~~~~~~~--~~d-----------~~~~--~~~~~~----~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
........ ... .... ...... ....++.+|+.+||..||++|||+.|+++
T Consensus 276 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 276 MMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 21110000 000 0000 000000 01235678888999999999999999864
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.8e-45 Score=383.67 Aligned_cols=186 Identities=23% Similarity=0.407 Sum_probs=162.8
Q ss_pred hcccCcCCeEEEEEEEEc----CCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD----DGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|+||+||+|+.+ +++.||||++.... ...++.+|+++|..+ +|||||++++++.++++.|+||||++
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~ 103 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLE 103 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCC
Confidence 478999999999999853 46889999987543 456788999999988 69999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC-CcEEEeccCCCccCCCC
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT-GNARVSDFGLSIFAPPS 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~-~~~kl~DfG~a~~~~~~ 518 (672)
+|+|.+++. .+++.++..++.|+++||+||| +.+|+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 104 g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH----~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~ 171 (361)
T 4f9c_A 104 HESFLDILN--------SLSFQEVREYMLNLFKALKRIH----QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT 171 (361)
T ss_dssp CCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTC
T ss_pred cccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHH----HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc
Confidence 999999984 3889999999999999999999 8899999999999999876 79999999999754321
Q ss_pred ---------------------------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 519 ---------------------------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 519 ---------------------------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
...||+.|+|||++.. ...++.++||||+||++|||+||+.||...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK-CPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp SCGGGGGC--------------------------CCCCGGGCCHHHHTT-CSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcC-CCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 2468999999998753 346899999999999999999999999643
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.1e-43 Score=370.51 Aligned_cols=268 Identities=34% Similarity=0.530 Sum_probs=224.5
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
.+.||+|+||.||+|+..+|+.||||++........+.+.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTG
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHH
Confidence 36799999999999998889999999998766667788999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC------
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS------ 518 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~------ 518 (672)
+++..... ....++|..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 ~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 198 (321)
T 2qkw_B 124 RHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198 (321)
T ss_dssp GGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred HHHhccCC-CccccCHHHHHHHHHHHHHHHHHhc----CCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 99976542 2346999999999999999999999 789999999999999999999999999999764322
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...+|..|+|||++. +..++.++|||||||++|||+||+.||......+ ......|.............++
T Consensus 199 ~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 270 (321)
T 2qkw_B 199 TVVKGTLGYIDPEYFI--KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE------MVNLAEWAVESHNNGQLEQIVD 270 (321)
T ss_dssp CCCEEETTTCCHHHHH--HCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSS------CCCHHHHTHHHHTTTCCCSSSS
T ss_pred cccCCCccccCHHHhc--CCCCCcccchHhHHHHHHHHHhCCCcccccCcHH------HHHHHHHhhhccccccHHHhcC
Confidence 233678899999765 4578999999999999999999999997654332 3455666655555555555555
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCC
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEV 646 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 646 (672)
+.... ....+....+.+++.+||+.||++|||+.||++.|+.+.+.+.
T Consensus 271 ~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 271 PNLAD-KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp SSCTT-CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred hhhcc-ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 44332 2235677789999999999999999999999999999986543
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.4e-44 Score=394.34 Aligned_cols=241 Identities=22% Similarity=0.322 Sum_probs=192.4
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHH---HHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKR---EFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~---~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|+.. +|+.||||++++.... ... ....++++++.++|||||++++++.+.+..|+||||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy 273 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 273 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence 478999999999999965 6999999999643211 122 234456788889999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
++||+|.++|... ..+++..+..++.||+.||+||| +.+||||||||+|||++.+|++||+|||+|+....
T Consensus 274 ~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH----~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 274 MNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp CCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred CCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 9999999999754 34999999999999999999999 89999999999999999999999999999987654
Q ss_pred C---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 518 S---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 518 ~---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
. ..+||+.|||||++.. +..|+.++||||+||++|||++|++||...... +............
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~-~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~---------~~~~i~~~i~~~~---- 410 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQK-GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK---------DKHEIDRMTLTMA---- 410 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHST-TCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC---------CHHHHHHHHHHCC----
T ss_pred CCCCCccCCcCccCHHHHhC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---------HHHHHHHhhcCCC----
Confidence 3 5789999999998742 457899999999999999999999999754321 2222222222211
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPN-----MSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~ 636 (672)
...+..+. .++.+|+.+||+.||++|++ +.||++
T Consensus 411 -----~~~p~~~S---~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 411 -----VELPDSFS---PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp -----CCCCTTSC---HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred -----CCCCccCC---HHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 11111222 34677888999999999998 567654
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.3e-43 Score=395.66 Aligned_cols=243 Identities=22% Similarity=0.387 Sum_probs=201.3
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
+.+.||+|+||.||+|+.+ +|+.||+|++........+.+.+|+++|+.++|||||++++++.+++..++|||||++|+
T Consensus 161 i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~ 240 (573)
T 3uto_A 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240 (573)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCc
Confidence 3578999999999999964 699999999987666667889999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC--CcEEEeccCCCccCCCC--
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT--GNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~--~~~kl~DfG~a~~~~~~-- 518 (672)
|.+++.... ..+++.++..++.||++||+||| +.+|+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 241 L~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH----~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 241 LFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMH----ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp HHHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred HHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 999996443 35899999999999999999999 7899999999999999854 89999999999887654
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...||+.|+|||++. +..|+.++||||+||++|||++|+.||... +..+.+..+...... +
T Consensus 313 ~~~~~GT~~y~APEv~~--~~~y~~~~DiWSlGvilyeml~G~~Pf~~~------------~~~~~~~~i~~~~~~---~ 375 (573)
T 3uto_A 313 VKVTTGTAEFAAPEVAE--GKPVGYYTDMWSVGVLSYILLSGLSPFGGE------------NDDETLRNVKSCDWN---M 375 (573)
T ss_dssp EEEECSSGGGCCHHHHT--TCCBCHHHHHHHHHHHHHHHHHSCCSSCCS------------SHHHHHHHHHTTCCC---C
T ss_pred eeeeEECccccCHHHhC--CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------------CHHHHHHHHHhCCCC---C
Confidence 457899999999875 567899999999999999999999999643 222333333332211 0
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .....+. ..+.+|+.+||+.||++|||+.|+++
T Consensus 376 ~~--~~~~~~s---~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 376 DD--SAFSGIS---EDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp CS--GGGTTSC---HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred Cc--ccccCCC---HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 10 0111222 34667888999999999999999975
No 21
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=6.1e-43 Score=365.01 Aligned_cols=263 Identities=25% Similarity=0.323 Sum_probs=202.4
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC----eEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE----EKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. ++.||||+++.... ....+.+|+.++.+++||||+++++++.... ..++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 478999999999999976 79999999975432 4456677999999999999999999998744 46999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCC----------CcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL----------KLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~----------~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
|+|.++++.. .+++..++.++.|+++||+||| +. +|+||||||+||+++.++.+||+|||
T Consensus 107 g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH----~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 107 GSLSDFLKAN------VVSWNELCHIAETMARGLAYLH----EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHT----CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred CCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH----hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence 9999999754 3899999999999999999999 67 99999999999999999999999999
Q ss_pred CCccCCCC-------CCCCCCcccCCCccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCC----CCC
Q 005880 511 LSIFAPPS-------TVPRSNGYRAPELSSSD---GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGC----GGA 576 (672)
Q Consensus 511 ~a~~~~~~-------~~~~t~~y~aPE~l~~~---~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~----~~~ 576 (672)
+++..... ...+|..|+|||++... ...++.++|||||||++|||+||+.||........... ...
T Consensus 177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 256 (322)
T 3soc_A 177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH 256 (322)
T ss_dssp TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence 99755432 34678999999987532 13456789999999999999999999976543221100 011
Q ss_pred CChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 577 VDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
.....+......... ...+. ...........+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 257 ~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 257 PSLEDMQEVVVHKKK-RPVLR----DYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CCHHHHHHHHTTSCC-CCCCC----GGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CchhhhhhhhhcccC-CCCcc----ccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 122222222221111 11111 1111123456789999999999999999999999999998753
No 22
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.6e-43 Score=368.42 Aligned_cols=281 Identities=40% Similarity=0.658 Sum_probs=224.6
Q ss_pred ccccCHHHHHHHH-----hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEE
Q 005880 352 TKRFELEDLLRAS-----AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYY 425 (672)
Q Consensus 352 ~~~~~~~~l~~~~-----~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~ 425 (672)
.+.|++.++.... .+.||+|+||.||+|+..+|+.||||+++..... ....+.+|++++++++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 3456666654432 4689999999999999888999999999754322 334789999999999999999999999
Q ss_pred EcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEE
Q 005880 426 FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNAR 505 (672)
Q Consensus 426 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~k 505 (672)
.+.+..++||||+++|+|.+++..... ...++++..+..|+.|+++||+|||..+ ..+|+||||||+||+++.++.+|
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHC-DPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSS-SSCEECCCCSGGGEEECTTCCEE
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCeEeCCCchhhEEECCCCCEE
Confidence 999999999999999999999986542 3456999999999999999999999322 12999999999999999999999
Q ss_pred EeccCCCccCCCC------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCh
Q 005880 506 VSDFGLSIFAPPS------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDL 579 (672)
Q Consensus 506 l~DfG~a~~~~~~------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~ 579 (672)
|+|||+++..... ...+|..|+|||++. +..++.++|||||||++|||+||+.||....... ......
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~ 248 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS--TGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN----DDDVML 248 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHH--HSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTT----TSCSBH
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhc--cCCCCccccchhHHHHHHHHHhCCCccccccccc----ccchhH
Confidence 9999999866432 345789999999764 4568999999999999999999999996321110 113456
Q ss_pred hHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 580 PRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 580 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
.+|+.............+..... ....+....+.+++.+||+.||++|||+.||++.|++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 249 LDWVKGLLKEKKLEALVDVDLQG-NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHHHTTTTSSCCSTTSSCTTCTT-SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHhhchhhhhhcChhhcc-ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 66666665555555555544432 33466778899999999999999999999999999974
No 23
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-42 Score=358.27 Aligned_cols=248 Identities=26% Similarity=0.450 Sum_probs=204.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 94 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcH
Confidence 478999999999999965 6899999999776666778899999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++.... ..+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 ~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 95 RGIIKSMD----SQYPWSQRVSFAKDIASGMAYLH----SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp HHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred HHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 99998643 45899999999999999999999 789999999999999999999999999999765432
Q ss_pred --------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHH
Q 005880 519 --------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQ 584 (672)
Q Consensus 519 --------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 584 (672)
...+|..|+|||++. +..++.++||||||+++|||++|..||......... .........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---~~~~~~~~~- 240 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMIN--GRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD---FGLNVRGFL- 240 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHT--TCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT---SSBCHHHHH-
T ss_pred ccccccccccccccccCCCcceeCHHHhc--CCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH---Hhhhhhccc-
Confidence 345788999999764 568899999999999999999999998654322100 011111111
Q ss_pred HHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 585 SVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
... . . ......+.+++.+||+.||++|||+.|+++.|+.++.
T Consensus 241 ---~~~-----~------~---~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 241 ---DRY-----C------P---PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp ---HHT-----C------C---TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---ccc-----C------C---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 110 0 0 1112347788899999999999999999999999864
No 24
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=5.6e-42 Score=353.42 Aligned_cols=239 Identities=23% Similarity=0.389 Sum_probs=197.5
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCH
Confidence 46899999999999995 57899999999766555677899999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 105 ~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 105 TDVVTET------CMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred HHHHhhc------CCCHHHHHHHHHHHHHHHHHHH----hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 9999754 3899999999999999999999 789999999999999999999999999998765533
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||.... ............. ...
T Consensus 175 ~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~------------~~~~~~~~~~~~~-~~~--- 236 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVT--RKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN------------PLRALYLIATNGT-PEL--- 236 (297)
T ss_dssp CCCSCGGGCCHHHHH--CSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------------HHHHHHHHHHHCS-CCC---
T ss_pred CccCCcCccChhhhc--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHhCCC-CCC---
Confidence 456789999999765 4578999999999999999999999996432 1222222222111 011
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.........+.+++.+||+.||++|||+.|+++
T Consensus 237 -----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 237 -----QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -----SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----CCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 011122345778888999999999999999975
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.4e-42 Score=358.21 Aligned_cols=254 Identities=33% Similarity=0.472 Sum_probs=195.8
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.+.||+|+||.||+|+. +|+.||||++..... ...+++.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 41 i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 357899999999999987 488999999875443 23467899999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC--cEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK--LTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~--iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|.+++.... ....+++..++.++.|+++||+||| +.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH----~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~ 193 (309)
T 3p86_A 120 SLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLH----NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193 (309)
T ss_dssp BHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHH----TSSSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred cHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHH----cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence 9999997543 1234899999999999999999999 777 999999999999999999999999999755432
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||.... ..+.............
T Consensus 194 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~elltg~~Pf~~~~------------~~~~~~~~~~~~~~~~ 259 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVLR--DEPSNEKSDVYSFGVILWELATLQQPWGNLN------------PAQVVAAVGFKCKRLE 259 (309)
T ss_dssp --------CCTTSCHHHHT--TCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC------------HHHHHHHHHHSCCCCC
T ss_pred cccccCCCCccccChhhhc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHhcCCCCC
Confidence 456789999999764 5578999999999999999999999996432 2222222211111000
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSP 648 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 648 (672)
.. ......+.+++.+||+.||++|||+.|+++.|+.+.+...++
T Consensus 260 -------~~---~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~ 303 (309)
T 3p86_A 260 -------IP---RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303 (309)
T ss_dssp -------CC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred -------CC---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence 01 112235778888999999999999999999999998755544
No 26
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.1e-41 Score=350.89 Aligned_cols=238 Identities=20% Similarity=0.312 Sum_probs=196.9
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+|.
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 130 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHH
Confidence 47999999999999976 79999999998666656788999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----C
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-----T 519 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-----~ 519 (672)
+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++...... .
T Consensus 131 ~~l~~~------~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 200 (321)
T 2c30_A 131 DIVSQV------RLNEEQIATVCEAVLQALAYLH----AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 200 (321)
T ss_dssp HHHTTC------CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred HHHHhc------CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccccc
Confidence 998643 4899999999999999999999 789999999999999999999999999998765432 4
Q ss_pred CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchh
Q 005880 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLE 599 (672)
Q Consensus 520 ~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (672)
..+|..|+|||++. +..++.++|||||||++|||++|+.||.... ..+......... . +.
T Consensus 201 ~~gt~~y~aPE~~~--~~~~~~~~Dv~slG~il~el~~g~~pf~~~~------------~~~~~~~~~~~~-~-----~~ 260 (321)
T 2c30_A 201 LVGTPYWMAPEVIS--RSLYATEVDIWSLGIMVIEMVDGEPPYFSDS------------PVQAMKRLRDSP-P-----PK 260 (321)
T ss_dssp CCSCGGGCCHHHHT--TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------------HHHHHHHHHHSS-C-----CC
T ss_pred ccCCccccCHhhhc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHhcCC-C-----CC
Confidence 56789999999764 5678999999999999999999999996431 122222221111 0 01
Q ss_pred hccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 600 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.... ......+.+++.+||+.||++|||+.|+++
T Consensus 261 ~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 261 LKNS---HKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp CTTG---GGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCcc---ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111 112235778888999999999999999975
No 27
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6.2e-42 Score=364.14 Aligned_cols=252 Identities=25% Similarity=0.363 Sum_probs=202.6
Q ss_pred HhcccCcCCeEEEEEEEEc--------CCcEEEEEEcccCCc-chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD--------DGSVVAVKRLKDASI-GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLL 433 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 433 (672)
..+.||+|+||.||+|+.. ++..||||+++.... ...+++.+|+++++++ +||||+++++++.+.+..++
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 3578999999999999852 356799999976533 3456899999999999 89999999999999999999
Q ss_pred EEeecCCCChhHHhhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC
Q 005880 434 VSEYMPNGSLFWLLHGNRGP-----------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG 502 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~ 502 (672)
||||+++|+|.+++...... ....+++.+++.++.|+++||+||| +.+|+||||||+|||++.++
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~ 240 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA----SQKCIHRDLAARNVLVTENN 240 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTC
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCeeccccchhhEEECCCC
Confidence 99999999999999865421 1235899999999999999999999 78999999999999999999
Q ss_pred cEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCC
Q 005880 503 NARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCG 574 (672)
Q Consensus 503 ~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~ 574 (672)
.+||+|||+++..... ...++..|+|||++. +..++.++|||||||++|||+| |+.||....
T Consensus 241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~DvwslG~il~ellt~g~~p~~~~~-------- 310 (370)
T 2psq_A 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-------- 310 (370)
T ss_dssp CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHH--TCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------
T ss_pred CEEEccccCCcccCcccceecccCCCcccceECHhHhc--CCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC--------
Confidence 9999999999865432 233466899999765 5678999999999999999999 999996432
Q ss_pred CCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 575 GAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
..+......... ... .. ......+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 311 ----~~~~~~~~~~~~-~~~-------~~---~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 311 ----VEELFKLLKEGH-RMD-------KP---ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp ----GGGHHHHHHTTC-CCC-------CC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHhcCC-CCC-------CC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 122222221111 100 00 12234578888999999999999999999999998754
No 28
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.6e-42 Score=350.63 Aligned_cols=246 Identities=25% Similarity=0.409 Sum_probs=204.0
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
.+.||+|+||.||+|+..+++.||+|+++.... ..+++.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 478999999999999998899999999986543 4578999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC------
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS------ 518 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~------ 518 (672)
+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 ~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 94 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLE----EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp HHHHTTT----TCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred HHHHhcC----cccCHHHHHHHHHHHHHHHHHHH----hCCeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 9997543 45899999999999999999999 789999999999999999999999999999866432
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||++. +..++.++||||||+++|||++ |+.||... ...+.......... ...
T Consensus 166 ~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~------------~~~~~~~~~~~~~~---~~~ 228 (269)
T 4hcu_A 166 GTKFPVKWASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENR------------SNSEVVEDISTGFR---LYK 228 (269)
T ss_dssp STTCCGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------------CHHHHHHHHHTTCC---CCC
T ss_pred CcccccccCCHHHhc--CCCCCchhhhHHHHHHHHHHhcCCCCCCCCC------------CHHHHHHHHhcCcc---CCC
Confidence 344567899999764 4578999999999999999999 99999643 22222222222110 000
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
+ ......+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 229 ~--------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 229 P--------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp C--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C--------CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 0 11123577888899999999999999999999998754
No 29
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.7e-41 Score=348.21 Aligned_cols=271 Identities=33% Similarity=0.526 Sum_probs=214.5
Q ss_pred cccCHHHHHHHHh-----------cccCcCCeEEEEEEEEcCCcEEEEEEcccCC----cchHHHHHHHHHHHcCCCCCc
Q 005880 353 KRFELEDLLRASA-----------EMLGKGGFGTAYKAVLDDGSVVAVKRLKDAS----IGGKREFEQHMEVLGRLRHPN 417 (672)
Q Consensus 353 ~~~~~~~l~~~~~-----------~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~n 417 (672)
..|.++++...+. +.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 4566666665542 6799999999999987 48899999986432 234678999999999999999
Q ss_pred eeeeEEEEEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEE
Q 005880 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVL 497 (672)
Q Consensus 418 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIl 497 (672)
|+++++++.+.+..++||||+++|+|.+++.... ...++++..++.++.|+++||+||| +.+|+||||||+||+
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dlkp~Nil 165 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLH----ENHHIHRDIKSANIL 165 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEE
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHh----cCCeecCCCCHHHEE
Confidence 9999999999999999999999999999997543 2346999999999999999999999 789999999999999
Q ss_pred eCCCCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 005880 498 LDKTGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAG 570 (672)
Q Consensus 498 l~~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~ 570 (672)
+++++.+||+|||+++..... ...++..|+|||++. ..++.++||||||+++|||++|+.||......
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-- 240 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREP-- 240 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT---TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSS--
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhc---CCCCccchhHHHHHHHHHHHHCCCCcccCcch--
Confidence 999999999999999765432 346788999999764 35789999999999999999999999754322
Q ss_pred CCCCCCCChhHHHHHHHhhh-ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 571 MGCGGAVDLPRWVQSVVREE-WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
..+..+........ .....++.... .........+.+++.+||+.||.+|||+.||++.|+++..
T Consensus 241 ------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 241 ------QLLLDIKEEIEDEEKTIEDYIDKKMN--DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp ------SBTTHHHHHHHTTSCCHHHHSCSSCS--CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred ------HHHHHHHHHhhhhhhhhhhhcccccc--ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 12223333222211 11122222221 1234566788999999999999999999999999999853
No 30
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=355.82 Aligned_cols=248 Identities=27% Similarity=0.376 Sum_probs=200.6
Q ss_pred HhcccCcCCeEEEEEEEEc----CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVLD----DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
+.+.||+|+||.||+|... .+..||||+++... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 3478999999999999974 35569999998643 334678999999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.++++... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 133 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 133 ENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLS----DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp TTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred CCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 9999999997543 35999999999999999999999 789999999999999999999999999999876442
Q ss_pred --------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 519 --------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 --------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
...+|..|+|||++. +..++.++|||||||++|||++ |+.||.... ..+........
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~Di~slG~il~ell~~g~~p~~~~~------------~~~~~~~~~~~ 270 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIA--FRTFSSASDVWSFGVVMWEVLAYGERPYWNMT------------NRDVISSVEEG 270 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHH--HCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC------------HHHHHHHHHTT
T ss_pred ccceeeccCCCCcccccCHhHhc--CCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC------------HHHHHHHHHcC
Confidence 223456799999764 4578999999999999999999 999996432 22222222221
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
... .........+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 271 ~~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 271 YRL-----------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp CCC-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred CCC-----------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 100 00112234678889999999999999999999999998753
No 31
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.6e-41 Score=354.69 Aligned_cols=238 Identities=22% Similarity=0.317 Sum_probs=196.0
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~ 99 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCC
Confidence 47899999999999996 579999999997543 234567889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 100 EVFDYLVAHG-----RMKEKEARSKFRQIVSAVQYCH----QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp BHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 9999997543 4899999999999999999999 789999999999999999999999999999765543
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...+|+.|+|||++... ...+.++||||+||++|||++|+.||... +..+...........
T Consensus 171 ~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~------------~~~~~~~~i~~~~~~----- 232 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPFDGQ------------NLKELRERVLRGKYR----- 232 (328)
T ss_dssp GTTSSSGGGCCHHHHHTC-CCCSHHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHCCCC-----
T ss_pred ccccCCcceeCcccccCC-CcCCchhhhhhhHHHHHHHHhCCCCCCCC------------CHHHHHHHHHhCCCC-----
Confidence 55689999999987532 33458999999999999999999999643 333333333332211
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.... ....+.+++.+||..||.+|||+.|+++
T Consensus 233 ----~p~~---~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 233 ----IPFY---MSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ----CCTT---SCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ----CCCC---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0111 1234678888999999999999999974
No 32
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.2e-41 Score=345.52 Aligned_cols=248 Identities=27% Similarity=0.424 Sum_probs=202.6
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
.+.||+|+||.||+|...++..||||+++.... ..+++.+|++++.+++||||+++++++.+++..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 478999999999999999888999999976544 4577999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC------
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS------ 518 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~------ 518 (672)
+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 92 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 163 (268)
T 3sxs_A 92 NYLRSHG----KGLEPSQLLEMCYDVCEGMAFLE----SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV 163 (268)
T ss_dssp HHHHHHG----GGCCHHHHHHHHHHHHHHHHHHH----HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECC
T ss_pred HHHHHcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhccc
Confidence 9997542 35899999999999999999999 789999999999999999999999999999766543
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||++. +..++.++||||||+++|||+| |+.||.... ............. ...
T Consensus 164 ~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------------~~~~~~~~~~~~~---~~~ 226 (268)
T 3sxs_A 164 GTKFPVKWSAPEVFH--YFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT------------NSEVVLKVSQGHR---LYR 226 (268)
T ss_dssp SCCCCGGGCCHHHHH--HSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC------------HHHHHHHHHTTCC---CCC
T ss_pred CCCcCcccCCHHHHh--ccCCchhhhhHHHHHHHHHHHcCCCCCccccC------------hHHHHHHHHcCCC---CCC
Confidence 234456799999764 4578899999999999999999 999996432 2222222222110 011
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCC
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEV 646 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 646 (672)
+ . .....+.+++.+||+.||++|||+.|+++.|+.+++...
T Consensus 227 ~-----~---~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~k 267 (268)
T 3sxs_A 227 P-----H---LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDK 267 (268)
T ss_dssp C-----T---TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC---
T ss_pred C-----C---cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhccC
Confidence 1 1 112357788899999999999999999999999976543
No 33
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5.8e-41 Score=346.35 Aligned_cols=255 Identities=24% Similarity=0.383 Sum_probs=192.4
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcC--CCCCceeeeEEEEEcC----CeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGR--LRHPNLVGLKAYYFAR----EEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~----~~~~lv~e~~ 438 (672)
.+.||+|+||.||+|+. +|+.||||++... ....+.+|.+++.. ++||||+++++++... ...++||||+
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 88 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence 47899999999999998 5899999998643 34555666666555 7999999999997643 4578999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC----CCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC----KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
++|+|.++++.. .+++..++.++.|+++||+|||... .+.+|+||||||+||+++.++.+||+|||+++.
T Consensus 89 ~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 162 (301)
T 3q4u_A 89 EMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM 162 (301)
T ss_dssp TTCBHHHHHTTC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCHHHHHhhc------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeee
Confidence 999999999643 4899999999999999999999321 146899999999999999999999999999965
Q ss_pred CCCC---------CCCCCCcccCCCccccCCC----CCCchhHHHHHHHHHHHHHhC----------CCCCCCCCCCCCC
Q 005880 515 APPS---------TVPRSNGYRAPELSSSDGR----KQSQKSDVYSFGVLLLELLTG----------KCPSVIDGGGAGM 571 (672)
Q Consensus 515 ~~~~---------~~~~t~~y~aPE~l~~~~~----~~~~~~DV~S~Gvvl~el~tg----------~~P~~~~~~~~~~ 571 (672)
.... ...+|..|+|||++..... .+++++|||||||++|||+|| +.||......
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~--- 239 (301)
T 3q4u_A 163 HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN--- 239 (301)
T ss_dssp EETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS---
T ss_pred cccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC---
Confidence 4332 3368899999997753211 345799999999999999999 7777543221
Q ss_pred CCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 572 GCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
....... .......... +..............+.+++.+||+.||++|||+.||++.|+++
T Consensus 240 ----~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 ----DPSFEDM-RKVVCVDQQR----PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp ----SCCHHHH-HHHHTTSCCC----CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ----Ccchhhh-hHHHhccCCC----CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1111222 1111111111 11111111134566789999999999999999999999999986
No 34
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.2e-40 Score=341.55 Aligned_cols=247 Identities=30% Similarity=0.510 Sum_probs=197.8
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcch-------HHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGG-------KREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
.+.||+|+||.||+|+. .+++.||||++....... .+.+.+|++++++++||||+++++++.+.. ++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e 101 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVME 101 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEE
Confidence 47899999999999996 478999999986433221 167899999999999999999999986554 69999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC--cEecCCCCCCEEeCCCCc-----EEEecc
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK--LTHGNIKSTNVLLDKTGN-----ARVSDF 509 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~--iiH~Dlkp~NIll~~~~~-----~kl~Df 509 (672)
|+++|+|.+++.... ..+++..++.++.|+++||+||| +.+ |+||||||+||+++.++. +||+||
T Consensus 102 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH----~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 102 FVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQ----NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp CCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHH----TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred ecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHH----hCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 999999999887543 46999999999999999999999 777 999999999999988776 999999
Q ss_pred CCCccCCCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 510 GLSIFAPPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 510 G~a~~~~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
|+++..... ...+|..|+|||++......++.++|||||||++|||++|+.||..... .-..+.....
T Consensus 174 g~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----------~~~~~~~~~~ 243 (287)
T 4f0f_A 174 GLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY----------GKIKFINMIR 243 (287)
T ss_dssp TTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC----------CHHHHHHHHH
T ss_pred CccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc----------cHHHHHHHHh
Confidence 999865544 5668899999998755566788999999999999999999999965421 1122222222
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
........ .......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 244 ~~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 244 EEGLRPTI----------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HSCCCCCC----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccCCCCCC----------CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 22111110 011234578888899999999999999999999864
No 35
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.5e-41 Score=361.36 Aligned_cols=247 Identities=24% Similarity=0.415 Sum_probs=192.2
Q ss_pred hcccCcCCeEEEEEEEEc----CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD----DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|+.. ++..||||+++... ....++|.+|++++++++||||+++++++.+.+..++||||++
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 129 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCC
Confidence 478999999999999964 57789999997543 3345789999999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|.++++... ..+++.+++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 130 ~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 130 NGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLS----DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp TCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 999999997543 45899999999999999999999 789999999999999999999999999999866432
Q ss_pred -------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 519 -------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 519 -------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
...++..|+|||++. +..++.++|||||||++|||++ |+.||.... ..+........
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~------------~~~~~~~i~~~- 266 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS------------NQDVIKAVDEG- 266 (373)
T ss_dssp ------------CTTSCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC------------HHHHHHHHHTT-
T ss_pred ccceeccCCCcCCCccChhhhc--cCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC------------HHHHHHHHHcC-
Confidence 112356799999764 4578999999999999999998 999996431 22222222111
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
.. .+........+.+++.+||+.||++||++.||++.|+++.+.
T Consensus 267 ~~----------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 267 YR----------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp EE----------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CC----------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 10 001112334688899999999999999999999999998653
No 36
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.3e-41 Score=369.83 Aligned_cols=247 Identities=26% Similarity=0.431 Sum_probs=202.6
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
+.+.||+|+||.||+|...++..||||+++.... ..+.|.+|++++++++||||+++++++. .+..++||||+++|+|
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L 269 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSL 269 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBH
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCCc-cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcH
Confidence 3578999999999999998889999999986543 5788999999999999999999999986 6678999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.++++... ...+++..++.++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 270 ~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 342 (454)
T 1qcf_A 270 LDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIE----QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342 (454)
T ss_dssp HHHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT
T ss_pred HHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc
Confidence 99997542 134889999999999999999999 789999999999999999999999999999876542
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++. ...++.++|||||||++|||+| |+.||... ...+....+......
T Consensus 343 ~~~~~~~~y~aPE~~~--~~~~~~~~DvwslG~~l~el~t~g~~P~~~~------------~~~~~~~~i~~~~~~---- 404 (454)
T 1qcf_A 343 EGAKFPIKWTAPEAIN--FGSFTIKSDVWSFGILLMEIVTYGRIPYPGM------------SNPEVIRALERGYRM---- 404 (454)
T ss_dssp CSSSSCGGGSCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------------CHHHHHHHHHHTCCC----
T ss_pred CCCcccccccCHHHhc--cCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC------------CHHHHHHHHHcCCCC----
Confidence 233466899999775 4578999999999999999999 99999643 222233222221110
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
+........+.+++.+||+.||++|||+.+|++.|+.+...
T Consensus 405 -------~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 405 -------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred -------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 00112234678889999999999999999999999988643
No 37
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=6.2e-41 Score=365.85 Aligned_cols=248 Identities=29% Similarity=0.405 Sum_probs=201.8
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC-eEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE-EKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~~g~ 442 (672)
..+.||+|+||.||+|... |+.||||+++... ..+.|.+|++++++++||||+++++++...+ ..++||||+++|+
T Consensus 197 ~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~ 273 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273 (450)
T ss_dssp EEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCB
T ss_pred EEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCc
Confidence 3578999999999999986 7899999998654 5678999999999999999999999988765 7899999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--CC
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--TV 520 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~ 520 (672)
|.+++.... ...+++..++.++.|+++||+||| +.+|+||||||+|||+++++.+||+|||+++..... ..
T Consensus 274 L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 346 (450)
T 1k9a_A 274 LVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346 (450)
T ss_dssp HHHHHHHHC---TTTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred HHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence 999998643 234799999999999999999999 789999999999999999999999999999865443 33
Q ss_pred CCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchh
Q 005880 521 PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLE 599 (672)
Q Consensus 521 ~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (672)
.++..|+|||++. +..++.++|||||||++|||+| |+.||...... +....+... ...
T Consensus 347 ~~~~~y~aPE~~~--~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~------------~~~~~i~~~-~~~------ 405 (450)
T 1k9a_A 347 KLPVKWTAPEALR--EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK------------DVVPRVEKG-YKM------ 405 (450)
T ss_dssp CCCTTTSCHHHHH--SSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT------------THHHHHHTT-CCC------
T ss_pred CCCcceeCHHHhc--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------------HHHHHHHcC-CCC------
Confidence 4577899999765 4678999999999999999998 99999654221 122222111 100
Q ss_pred hccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCC
Q 005880 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEV 646 (672)
Q Consensus 600 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 646 (672)
... ......+.+++.+||+.||++|||+.|+++.|+.+...+.
T Consensus 406 -~~p---~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~l 448 (450)
T 1k9a_A 406 -DAP---DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHEL 448 (450)
T ss_dssp -CCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred -CCC---CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhhc
Confidence 011 1223467888899999999999999999999999976543
No 38
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.7e-41 Score=343.30 Aligned_cols=246 Identities=24% Similarity=0.376 Sum_probs=200.2
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
..+.||+|+||.||+|...++..||||+++.... ..+++.+|++++.+++||||+++++++.+.+..++||||+++|+|
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 106 (283)
T 3gen_A 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106 (283)
T ss_dssp EEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBH
T ss_pred hHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcH
Confidence 3578999999999999999888999999986544 457899999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++.... ..+++.+++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 107 ~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (283)
T 3gen_A 107 LNYLREMR----HRFQTQQLLEMCKDVCEAMEYLE----SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178 (283)
T ss_dssp HHHHHCGG----GCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred HHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence 99997533 35999999999999999999999 789999999999999999999999999999866442
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++. +..++.++||||||+++|||+| |+.||.... ..+.......... ..
T Consensus 179 ~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~------------~~~~~~~~~~~~~---~~ 241 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT------------NSETAEHIAQGLR---LY 241 (283)
T ss_dssp TSTTSCGGGCCHHHHH--HCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC------------HHHHHHHHHTTCC---CC
T ss_pred cCCccCcccCCHHHhc--cCCCCchhhHHHHHHHHHHHHhCCCCCccccC------------hhHHHHHHhcccC---CC
Confidence 344567899999765 4578999999999999999998 999996432 2222222221110 00
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
. . ......+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 242 ~-----~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 242 R-----P---HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp C-----C---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C-----C---CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 0 0 1112357788899999999999999999999999864
No 39
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.5e-41 Score=349.86 Aligned_cols=260 Identities=25% Similarity=0.407 Sum_probs=198.5
Q ss_pred hcccCcCCeEEEEEEEE-----cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVL-----DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e~ 437 (672)
.+.||+|+||.||+|++ .+|+.||||+++.......+.+.+|++++++++||||+++++++... ...++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 94 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 94 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEEC
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEe
Confidence 47899999999999984 25899999999876666678899999999999999999999998654 458999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++++||+|||+++....
T Consensus 95 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 95 LPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLG----TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp CTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred CCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHh----cCCcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 99999999997653 35899999999999999999999 78999999999999999999999999999987643
Q ss_pred C--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCC--CCC-CCCCChhHHHHHH
Q 005880 518 S--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAG--MGC-GGAVDLPRWVQSV 586 (672)
Q Consensus 518 ~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~--~~~-~~~~~~~~~~~~~ 586 (672)
. ...++..|+|||++. +..++.++||||||+++|||+||..|+........ ... .............
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244 (295)
T ss_dssp ---------CTTCGGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhc--CCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHH
Confidence 2 223455699999765 45789999999999999999999999853210000 000 0000000011111
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
..... ..+........+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 245 ~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 245 LKNNG----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHTTC----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HhccC----------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 11110 0011122334678889999999999999999999999998753
No 40
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.1e-41 Score=363.36 Aligned_cols=247 Identities=26% Similarity=0.381 Sum_probs=200.4
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
..+.||+|+||.||+|+.. +++.||||+++.... ...++|.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 3578999999999999976 789999999975432 23457889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST-- 519 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~-- 519 (672)
+|.++++... ..+++..++.++.|+++||+||| +.+|+||||||+|||+++++.+||+|||+++......
T Consensus 198 ~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 198 DFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLE----SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp BHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 9999997542 35899999999999999999999 7899999999999999999999999999998654431
Q ss_pred -----CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 520 -----VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 520 -----~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
..++..|+|||++. +..++.++|||||||++|||+| |+.||.... ..+. ..........
T Consensus 270 ~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwslG~il~el~t~g~~p~~~~~------------~~~~-~~~~~~~~~~ 334 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALN--YGRYSSESDVWSFGILLWETFSLGASPYPNLS------------NQQT-REFVEKGGRL 334 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHH--HCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC------------HHHH-HHHHHTTCCC
T ss_pred ecCCCCCCCcCcCCHhHhc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------------HHHH-HHHHHcCCCC
Confidence 11245699999765 4578999999999999999998 999986431 1111 1112111100
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
+........+.+++.+||+.||++|||+.++++.|+++.+
T Consensus 335 ----------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 335 ----------PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 0011123457788999999999999999999999999874
No 41
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=347.17 Aligned_cols=270 Identities=20% Similarity=0.247 Sum_probs=207.7
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC--eEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE--EKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 478999999999999965 58999999997543 234677889999999999999999999998765 77999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe----CCCCcEEEeccCCCccCC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL----DKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll----~~~~~~kl~DfG~a~~~~ 516 (672)
|+|.+++..... ...+++.+++.++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||+++...
T Consensus 94 ~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 94 GSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLR----ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp CBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred CCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 999999986432 234899999999999999999999 7899999999999999 788889999999998765
Q ss_pred CC----CCCCCCcccCCCcccc------CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 517 PS----TVPRSNGYRAPELSSS------DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 517 ~~----~~~~t~~y~aPE~l~~------~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
.. ...+|..|+|||++.. .+..++.++|||||||++|||+||+.||...... ....+.+...
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~ 239 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP--------RRNKEVMYKI 239 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG--------GGCHHHHHHH
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc--------chhHHHHHHH
Confidence 43 4457889999997642 1467889999999999999999999999743221 1223333333
Q ss_pred Hhhhcccc---c-------c--chhhc-cccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 005880 587 VREEWTAE---V-------F--DLELM-RYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSP 648 (672)
Q Consensus 587 ~~~~~~~~---~-------~--d~~~~-~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 648 (672)
........ + + ..... ...........+.+++.+||+.||++|||+.|+++...+..-....+
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~~~~ 314 (319)
T 4euu_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRGNSH 314 (319)
T ss_dssp HHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-----
T ss_pred hcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcCCcc
Confidence 33221100 0 0 00000 01122455667888999999999999999999999998876544433
No 42
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=8.4e-41 Score=339.42 Aligned_cols=249 Identities=24% Similarity=0.358 Sum_probs=202.6
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. |+.||||+++... ....+.+.+|++++++++||||+++++++.+. +..++||||+++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 478999999999999986 8899999997543 23456899999999999999999999999877 778999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC--cEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK--LTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~--iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
|+|.+++.... ...+++..++.++.|+++||+||| +.+ |+||||||+||+++.++.++|+|||++......
T Consensus 94 ~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~ 166 (271)
T 3kmu_A 94 GSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLH----TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP 166 (271)
T ss_dssp CBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHT----TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT
T ss_pred CcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHh----cCCCceecCCCccceEEEcCCcceeEEeccceeeeccc
Confidence 99999998643 236899999999999999999999 667 999999999999999999999999998777667
Q ss_pred CCCCCCcccCCCccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 TVPRSNGYRAPELSSSD-GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~-~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...+|..|+|||++... ...++.++|||||||++|||++|+.||... ..................
T Consensus 167 ~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~------------~~~~~~~~~~~~~~~~~~-- 232 (271)
T 3kmu_A 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL------------SNMEIGMKVALEGLRPTI-- 232 (271)
T ss_dssp TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS------------CHHHHHHHHHHSCCCCCC--
T ss_pred CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc------------ChHHHHHHHHhcCCCCCC--
Confidence 77889999999987532 122344899999999999999999999643 222222222222211110
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
. ......+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 233 -----~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 233 -----P---PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -----C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -----C---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1 1122357788889999999999999999999999864
No 43
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=353.33 Aligned_cols=239 Identities=24% Similarity=0.357 Sum_probs=190.5
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~ 94 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGE 94 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCC
Confidence 47899999999999995 5799999999875432 234578999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||++......
T Consensus 95 L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 95 LFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVH----SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp HHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 99999754 34899999999999999999999 789999999999999999999999999998765432
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...+|..|+|||++.. ...++.++||||+||++|||++|+.||... +.......+......
T Consensus 166 ~~~~~gt~~y~aPE~~~~-~~~~~~~~DiwSlG~il~ell~g~~Pf~~~------------~~~~~~~~i~~~~~~---- 228 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQG-KSYLGSEADVWSMGILLYVLMCGFLPFDDD------------NVMALYKKIMRGKYD---- 228 (347)
T ss_dssp ------CGGGCCHHHHTT-C---CCHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHTCCC----
T ss_pred ccccCCccCccCHHHHcC-CCCCCcHhHHHHHHHHHHHHHHCCCCCCCC------------CHHHHHHHHHcCCCC----
Confidence 4467899999998753 233589999999999999999999999643 233333333332210
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
.... ....+.+++.+||+.||++|||+.|+++.
T Consensus 229 -----~p~~---~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 229 -----VPKW---LSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -----CCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -----CCCC---CCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 0111 12346778889999999999999999863
No 44
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=356.70 Aligned_cols=258 Identities=25% Similarity=0.336 Sum_probs=205.8
Q ss_pred HhcccCcCCeEEEEEEEEc--------CCcEEEEEEcccCCc-chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD--------DGSVVAVKRLKDASI-GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLL 433 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 433 (672)
+.+.||+|+||.||+|+.. .+..||||+++.... ...+++.+|+++++++ +||||+++++++.+++..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 3478999999999999952 236799999976433 3457899999999999 89999999999999999999
Q ss_pred EEeecCCCChhHHhhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC
Q 005880 434 VSEYMPNGSLFWLLHGNRGP-----------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG 502 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~ 502 (672)
||||+++|+|.+++...... ....+++..++.|+.|+++||+||| +.+|+||||||+||++++++
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~ 228 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIHRDLAARNVLVTEDN 228 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTC
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCcceEEEcCCC
Confidence 99999999999999865421 1245999999999999999999999 78999999999999999999
Q ss_pred cEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCC
Q 005880 503 NARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCG 574 (672)
Q Consensus 503 ~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~ 574 (672)
.+||+|||+++..... ...+|..|+|||++. +..++.++|||||||++|||++ |+.||...
T Consensus 229 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~DiwslG~il~ellt~g~~p~~~~--------- 297 (382)
T 3tt0_A 229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--------- 297 (382)
T ss_dssp CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHH--SCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC---------
T ss_pred cEEEcccCcccccccccccccccCCCCCcceeCHHHhc--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---------
Confidence 9999999999865432 233467899999765 5678999999999999999999 99998632
Q ss_pred CCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCCCC
Q 005880 575 GAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPCH 650 (672)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~ 650 (672)
...+.......... .. .. ......+.+++.+||+.||++|||+.||++.|+++.........
T Consensus 298 ---~~~~~~~~~~~~~~-~~-------~~---~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~ 359 (382)
T 3tt0_A 298 ---PVEELFKLLKEGHR-MD-------KP---SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEM 359 (382)
T ss_dssp ---CHHHHHHHHHTTCC-CC-------CC---SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC-
T ss_pred ---CHHHHHHHHHcCCC-CC-------CC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCC
Confidence 22223222222211 00 01 11223578888899999999999999999999999865544443
No 45
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=352.37 Aligned_cols=241 Identities=23% Similarity=0.338 Sum_probs=194.2
Q ss_pred cccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
+.||+|+||.||+|.. .+|+.||+|+++.......+++.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~ 174 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEH
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence 5799999999999996 468999999998766667788999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe--CCCCcEEEeccCCCccCCCC----
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL--DKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll--~~~~~~kl~DfG~a~~~~~~---- 518 (672)
+++.... ..+++..++.++.|+++||+||| +.+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 175 ~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~ 246 (373)
T 2x4f_A 175 DRIIDES----YNLTELDTILFMKQICEGIRHMH----QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK 246 (373)
T ss_dssp HHHHHTG----GGCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCC
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccc
Confidence 9887543 45899999999999999999999 7899999999999999 56789999999999876543
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||... +..+.+..+....+.. ...
T Consensus 247 ~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~elltg~~pf~~~------------~~~~~~~~i~~~~~~~--~~~ 310 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVN--YDFVSFPTDMWSVGVIAYMLLSGLSPFLGD------------NDAETLNNILACRWDL--EDE 310 (373)
T ss_dssp CCCSSCTTCCHHHHT--TCBCCHHHHHHHHHHHHHHHHHSSCTTCCS------------SHHHHHHHHHHTCCCS--CSG
T ss_pred cccCCCcEeChhhcc--CCCCCcHHhHHHHHHHHHHHHhCCCCCCCC------------CHHHHHHHHHhccCCC--Chh
Confidence 345789999999764 567899999999999999999999999643 2223333333322110 000
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
... .....+.+++.+||+.||++|||+.|+++
T Consensus 311 ---~~~---~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 311 ---EFQ---DISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp ---GGT---TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---hhc---cCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 011 12235778888999999999999999987
No 46
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=7.8e-41 Score=355.28 Aligned_cols=269 Identities=17% Similarity=0.183 Sum_probs=202.5
Q ss_pred hcccCcCCeEEEEEEEEcC------CcEEEEEEcccCCcch-----------HHHHHHHHHHHcCCCCCceeeeEEEEEc
Q 005880 365 AEMLGKGGFGTAYKAVLDD------GSVVAVKRLKDASIGG-----------KREFEQHMEVLGRLRHPNLVGLKAYYFA 427 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~l~~~~~~ 427 (672)
.+.||+|+||.||+|...+ ++.||||++....... ...+.+|+..+..++||||+++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 4789999999999999764 4789999987543211 1223456667788899999999999876
Q ss_pred C----CeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC--CC
Q 005880 428 R----EEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD--KT 501 (672)
Q Consensus 428 ~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~--~~ 501 (672)
. ...++||||+ +|+|.+++.... ..+++..++.|+.|+++||+||| +.+|+||||||+|||++ .+
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH----~~~iiHrDlkp~Nill~~~~~ 190 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIH----EHEYVHGDIKASNLLLNYKNP 190 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEESSCT
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEEecCCHHHEEEecCCC
Confidence 4 4579999999 999999997643 45999999999999999999999 78999999999999999 88
Q ss_pred CcEEEeccCCCccCCCC------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCC
Q 005880 502 GNARVSDFGLSIFAPPS------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGA 569 (672)
Q Consensus 502 ~~~kl~DfG~a~~~~~~------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~ 569 (672)
+.+||+|||+++..... ...+|..|+|||++. +..++.++|||||||++|||+||+.||......
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~- 267 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHN--GVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD- 267 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHT--TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-
T ss_pred CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhC--CCCCCchhhHHHHHHHHHHHHhCCCCccccccC-
Confidence 99999999999765321 234889999999764 557899999999999999999999999753211
Q ss_pred CCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCCC
Q 005880 570 GMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPC 649 (672)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~ 649 (672)
.....+....... ....+++..+.. . ....++.+++..||+.||++||++.+|++.|+++.+......
T Consensus 268 -------~~~~~~~~~~~~~-~~~~~~~~~~~~-~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~ 335 (364)
T 3op5_A 268 -------PKYVRDSKIRYRE-NIASLMDKCFPA-A---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKD 335 (364)
T ss_dssp -------HHHHHHHHHHHHH-CHHHHHHHHSCT-T---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred -------HHHHHHHHHHhhh-hHHHHHHHhccc-c---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCc
Confidence 1111111111111 122222222211 1 113457888889999999999999999999999987666666
Q ss_pred CCCCCCCC
Q 005880 650 HENFDSVS 657 (672)
Q Consensus 650 ~~~~~~~~ 657 (672)
...+++..
T Consensus 336 ~~~~dw~~ 343 (364)
T 3op5_A 336 DGKLDLSV 343 (364)
T ss_dssp CCCCCC--
T ss_pred CCccceEe
Confidence 66666543
No 47
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.1e-40 Score=341.13 Aligned_cols=253 Identities=24% Similarity=0.303 Sum_probs=193.7
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|+..+|+.||||+++.... .....+.+|++++++++||||+++++++.+++..++||||++ |+
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 104 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KD 104 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EE
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CC
Confidence 478999999999999998899999999974332 235678999999999999999999999999999999999997 48
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 105 l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 105 LKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCH----QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp HHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred HHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 888887543 45899999999999999999999 789999999999999999999999999999865432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc--
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV-- 595 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 595 (672)
...+|..|+|||++.. ...++.++|||||||++|||++|+.||......+ ....+............
T Consensus 177 ~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---------~~~~i~~~~~~~~~~~~~~ 246 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMG-SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD---------QLPKIFSILGTPNPREWPQ 246 (311)
T ss_dssp -CCCCCCTTCCHHHHTT-CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT---------HHHHHHHHHCCCCTTTSGG
T ss_pred cCCcccCCcCCHHHhcC-CCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH---------HHHHHHHHHCCCChHHhhh
Confidence 4467889999997643 3568999999999999999999999997543221 11111111111000000
Q ss_pred -cch------h--hccccCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 -FDL------E--LMRYKDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 -~d~------~--~~~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.+. . ....... .....++.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp GTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000 0 0000000 011245778999999999999999999974
No 48
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.7e-40 Score=341.47 Aligned_cols=252 Identities=26% Similarity=0.424 Sum_probs=197.3
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.+.||+|+||.||+|... ..+|+|+++... ....+.+.+|++++++++||||+++++++. .+..++||||+++|
T Consensus 40 ~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~ 116 (307)
T 3lb7_A 40 LSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCC
Confidence 3578999999999999865 358999887533 234578999999999999999999999864 56688999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC----
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP---- 517 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~---- 517 (672)
+|.+++.... ..+++.+++.|+.|+++||+||| +.+|+||||||+||++++++.+||+|||+++....
T Consensus 117 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 117 SLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLH----AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp BHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH----hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 9999997543 45999999999999999999999 78999999999999999999999999999975432
Q ss_pred ---CCCCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 518 ---STVPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 518 ---~~~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
....+|..|+|||++.. .+..++.++|||||||++|||++|+.||..... .+.+..........
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~------------~~~~~~~~~~~~~~ 256 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN------------RDQIIFMVGRGYAS 256 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC------------HHHHHHHHHHTCCC
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc------------HHHHHHHHhcCCCC
Confidence 14567899999998742 245688999999999999999999999964321 11122222221111
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
. ..... .......+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 257 ~----~~~~~--~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 257 P----DLSKL--YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp C----CSTTS--CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred c----chhhh--hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 1 11000 011234578888899999999999999999999998753
No 49
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.6e-40 Score=340.54 Aligned_cols=251 Identities=22% Similarity=0.308 Sum_probs=198.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++.+++||||+++++++.+++..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 95 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCC
Confidence 478999999999999954 68999999985432 22356789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... .++++..++.++.|+++||+||| +.+|+||||||+||+++.++++||+|||+++.....
T Consensus 96 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 96 PTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAH----DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp CBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 9999999754 35899999999999999999999 789999999999999999999999999999766432
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...+|..|+|||++. +..++.++||||||+++|||+||+.||.... ..........+..
T Consensus 167 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~------------~~~~~~~~~~~~~--- 229 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAK--GEATDECTDIYSIGIVLYEMLVGEPPFNGET------------AVSIAIKHIQDSV--- 229 (294)
T ss_dssp --------CCSSCCHHHHH--TCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC------------HHHHHHHHHSSCC---
T ss_pred cccCccccCccccCHhHhc--CCCCCchHhHHHHHHHHHHHHhCCCCCCCCC------------hHHHHHHHhhccC---
Confidence 345789999999764 4678899999999999999999999996432 1222222222111
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHHhcCC
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-NMSHVVKLIEELRGVE 645 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-t~~evl~~L~~i~~~~ 645 (672)
......... .....+.+++.+||+.||++|| +++++.+.|+.+....
T Consensus 230 -~~~~~~~~~---~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 230 -PNVTTDVRK---DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp -CCHHHHSCT---TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred -CCcchhccc---CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 000000011 1234577888899999999999 9999999999876433
No 50
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=343.11 Aligned_cols=240 Identities=22% Similarity=0.327 Sum_probs=187.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc--------------------------hHHHHHHHHHHHcCCCCCc
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG--------------------------GKREFEQHMEVLGRLRHPN 417 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--------------------------~~~~~~~e~~~l~~l~h~n 417 (672)
.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 478999999999999964 6899999998654311 1356889999999999999
Q ss_pred eeeeEEEEEc--CCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCC
Q 005880 418 LVGLKAYYFA--REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTN 495 (672)
Q Consensus 418 iv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~N 495 (672)
|+++++++.+ .+..++||||+++|+|.+++.. .++++..+..++.|+++||+||| +.+|+||||||+|
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~N 167 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLH----YQKIIHRDIKPSN 167 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGG
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHH
Confidence 9999999987 5678999999999999886542 35999999999999999999999 7899999999999
Q ss_pred EEeCCCCcEEEeccCCCccCCCC-----CCCCCCcccCCCccccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCCCC
Q 005880 496 VLLDKTGNARVSDFGLSIFAPPS-----TVPRSNGYRAPELSSSDGR-KQSQKSDVYSFGVLLLELLTGKCPSVIDGGGA 569 (672)
Q Consensus 496 Ill~~~~~~kl~DfG~a~~~~~~-----~~~~t~~y~aPE~l~~~~~-~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~ 569 (672)
|+++.++.+||+|||+++..... ...+|..|+|||++..... .++.++|||||||++|||++|+.||...
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~---- 243 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE---- 243 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS----
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc----
Confidence 99999999999999999766542 4568899999998753322 2478999999999999999999999642
Q ss_pred CCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 570 GMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....+.......... ...... ....+.+++.+||+.||++|||+.|+++
T Consensus 244 --------~~~~~~~~~~~~~~~-------~~~~~~---~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 244 --------RIMCLHSKIKSQALE-------FPDQPD---IAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp --------SHHHHHHHHHHCCCC-------CCSSSC---CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --------cHHHHHHHHhcccCC-------CCCccc---cCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 222222222221110 000111 2235778888999999999999999864
No 51
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.9e-40 Score=339.63 Aligned_cols=262 Identities=18% Similarity=0.196 Sum_probs=206.0
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|++++.++ +|+|++++++++.+....++||||+ +++
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 91 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPS 91 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCC
Confidence 47899999999999995 578999999986543 345688899999999 7999999999999999999999999 999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc-----EEEeccCCCccCCC
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN-----ARVSDFGLSIFAPP 517 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~-----~kl~DfG~a~~~~~ 517 (672)
|.+++.... .++++..+..++.|+++||+||| +.+|+||||||+||+++.++. +||+|||+++....
T Consensus 92 L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 92 LEDLLDLCG----RKFSVKTVAMAAKQMLARVQSIH----EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred HHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 999998643 35899999999999999999999 889999999999999987776 99999999976543
Q ss_pred C------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 005880 518 S------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQS 585 (672)
Q Consensus 518 ~------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 585 (672)
. ...+|..|+|||++. +..++.++|||||||++|||++|+.||...... ........
T Consensus 164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---------~~~~~~~~ 232 (298)
T 1csn_A 164 PVTKQHIPYREKKNLSGTARYMSINTHL--GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA---------TNKQKYER 232 (298)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHT--TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC---------CHHHHHHH
T ss_pred ccccccccccCccCCCCCcccCCchhhc--CCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc---------ccHHHHHH
Confidence 2 345788999999764 567899999999999999999999999764321 12222222
Q ss_pred HHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCC
Q 005880 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPCHENFDS 655 (672)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~~~~~~ 655 (672)
.......... +.. .. .....+.+++.+||+.||++|||+.+|++.|+++.+.........+++
T Consensus 233 ~~~~~~~~~~--~~~--~~---~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw 295 (298)
T 1csn_A 233 IGEKKQSTPL--REL--CA---GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDW 295 (298)
T ss_dssp HHHHHHHSCH--HHH--TT---TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGG
T ss_pred HHhhccCccH--HHH--Hh---hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCcccc
Confidence 2111110000 000 00 123467888899999999999999999999999986554444444444
No 52
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.3e-40 Score=348.61 Aligned_cols=261 Identities=18% Similarity=0.187 Sum_probs=205.9
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+++++++ +||||+++++++.+.+..++||||+ +|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPS 90 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCC
Confidence 47899999999999995 578999999987543 234688999999999 9999999999999999999999999 999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc-----EEEeccCCCccCCC
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN-----ARVSDFGLSIFAPP 517 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~-----~kl~DfG~a~~~~~ 517 (672)
|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++. +||+|||+++....
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH----~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 91 LEDLFDLCD----RTFSLKTVLMIAIQLISRMEYVH----SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred HHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 999998642 35999999999999999999999 789999999999999998887 99999999976532
Q ss_pred ------------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 005880 518 ------------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQS 585 (672)
Q Consensus 518 ------------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 585 (672)
....+|..|+|||++. +..++.++|||||||++|||++|+.||..... ....+.+..
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~---------~~~~~~~~~ 231 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHL--GKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA---------DTLKERYQK 231 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHT--TCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC---------SSHHHHHHH
T ss_pred CCCCccccccccCCcCCCccccChHHHc--CCCCCchhHHHHHHHHHHHHhcCCCCcccccc---------ccHHHHHHH
Confidence 2446789999999764 56789999999999999999999999975432 223333333
Q ss_pred HHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCC
Q 005880 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPCHENFDS 655 (672)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~~~~~~ 655 (672)
........ ..... ... .. ++.+++..||+.||.+||++.+|++.|+++.+.........+++
T Consensus 232 i~~~~~~~---~~~~~-~~~---~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw 293 (330)
T 2izr_A 232 IGDTKRAT---PIEVL-CEN---FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 293 (330)
T ss_dssp HHHHHHHS---CHHHH-TTT---CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTT
T ss_pred HHhhhccC---CHHHH-hcc---Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccC
Confidence 22221100 00000 001 11 68888999999999999999999999999876444443334443
No 53
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=342.65 Aligned_cols=250 Identities=29% Similarity=0.448 Sum_probs=192.8
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
.+.||+|+||.||+|+.. ++.||||++.... ..+.+.+|++++++++||||+++++++. +..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 478999999999999986 7889999997543 5678999999999999999999999876 4578999999999999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc-EEEeccCCCccCCCC--CCC
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN-ARVSDFGLSIFAPPS--TVP 521 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~-~kl~DfG~a~~~~~~--~~~ 521 (672)
+++..... ...+++..++.++.|+++||+|||+.. ..+|+||||||+||+++.++. +||+|||++...... ...
T Consensus 88 ~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (307)
T 2eva_A 88 NVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQ-PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK 164 (307)
T ss_dssp HHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCS-SSCCCCCCCSGGGEEEETTTTEEEECCCCC------------
T ss_pred HHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCC-CCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCC
Confidence 99986531 235789999999999999999999321 178999999999999998886 799999999765443 456
Q ss_pred CCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhc
Q 005880 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELM 601 (672)
Q Consensus 522 ~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (672)
+|..|+|||++. +..++.++||||||+++|||++|+.||..... ............. ....
T Consensus 165 gt~~y~aPE~~~--~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----------~~~~~~~~~~~~~-~~~~------ 225 (307)
T 2eva_A 165 GSAAWMAPEVFE--GSNYSEKCDVFSWGIILWEVITRRKPFDEIGG----------PAFRIMWAVHNGT-RPPL------ 225 (307)
T ss_dssp CCTTSSCHHHHT--CCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS----------SHHHHHHHHHTTC-CCCC------
T ss_pred CCCceEChhhhC--CCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc----------cHHHHHHHHhcCC-CCCc------
Confidence 789999999764 56789999999999999999999999964321 1111111111111 0000
Q ss_pred cccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCC
Q 005880 602 RYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVE 645 (672)
Q Consensus 602 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 645 (672)
.......+.+++.+||+.||++|||+.|+++.|+.+.+.-
T Consensus 226 ----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 226 ----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp ----BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred ----ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 0112235778888999999999999999999999987643
No 54
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.9e-40 Score=346.07 Aligned_cols=237 Identities=25% Similarity=0.345 Sum_probs=195.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +|+.||+|++++.. ......+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~g 89 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 478999999999999965 68999999997532 22456788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC---
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--- 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~--- 517 (672)
|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 90 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 90 GELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp CBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 9999999754 34899999999999999999999 78999999999999999999999999999976432
Q ss_pred --CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 518 --STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 518 --~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
....||+.|+|||++. +..++.++|||||||++|||++|+.||... +.......+.....
T Consensus 161 ~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~g~~Pf~~~------------~~~~~~~~i~~~~~---- 222 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------------DHERLFELILMEEI---- 222 (337)
T ss_dssp CBCCCEECGGGCCGGGGS--SSCBCTTHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHCCC----
T ss_pred cccccccChhhCChhhhc--CCCCCchhhcccchhHHHHHhcCCCCCCCC------------CHHHHHHHHHcCCC----
Confidence 2455789999999764 457899999999999999999999999643 22233333332211
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 636 (672)
..... ...++.+++.+||+.||++|| ++.|+++
T Consensus 223 -----~~p~~---~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 223 -----RFPRT---LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -----CCCTT---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -----CCCCC---CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 00111 123567888899999999999 8999876
No 55
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-40 Score=345.01 Aligned_cols=241 Identities=22% Similarity=0.352 Sum_probs=197.4
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||.||+|... +|+.||+|.++... .....+.+|+++++.++||||+++++++.+.+..++||||+++|+|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L 88 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDI 88 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCH
Confidence 478999999999999965 68999999987543 3556789999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC--CCcEEEeccCCCccCCCC---
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK--TGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~--~~~~kl~DfG~a~~~~~~--- 518 (672)
.+++.... ..+++.+++.++.|+++||+||| +.+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 89 ~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH----~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~ 160 (321)
T 1tki_A 89 FERINTSA----FELNEREIVSYVHQVCEALQFLH----SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp HHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence 99997542 35899999999999999999999 789999999999999987 789999999999877554
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...+|+.|+|||++. +..++.++|||||||++|||++|+.||... ...+.+..+...... ++
T Consensus 161 ~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~~ll~g~~pf~~~------------~~~~~~~~i~~~~~~---~~ 223 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQ--HDVVSTATDMWSLGTLVYVLLSGINPFLAE------------TNQQIIENIMNAEYT---FD 223 (321)
T ss_dssp EEEESCGGGSCHHHHT--TCEECHHHHHHHHHHHHHHHHHSSCTTCCS------------SHHHHHHHHHHTCCC---CC
T ss_pred ccccCChhhcCcHHhc--CCCCCchhhHHHHHHHHHHHHhCCCCCcCC------------CHHHHHHHHHcCCCC---CC
Confidence 345788999999764 456789999999999999999999999643 222333333332211 01
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
... .. ....++.+++.+||..||++|||+.|+++
T Consensus 224 ~~~--~~---~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 224 EEA--FK---EISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHH--HT---TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhh--hc---cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000 01 12245778888999999999999999987
No 56
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.7e-40 Score=336.53 Aligned_cols=246 Identities=25% Similarity=0.417 Sum_probs=203.5
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
.+.||+|+||.||+|...+++.||+|+++.... ..+++.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 478999999999999998889999999986544 4578999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC------
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS------ 518 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~------ 518 (672)
+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 92 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 92 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLE----EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp HHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred HHHhhCc----ccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 9997653 35899999999999999999999 789999999999999999999999999999866432
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||++. +..++.++||||||+++|||++ |+.||... ...+.......... ...
T Consensus 164 ~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~~g~~p~~~~------------~~~~~~~~i~~~~~---~~~ 226 (267)
T 3t9t_A 164 GTKFPVKWASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENR------------SNSEVVEDISTGFR---LYK 226 (267)
T ss_dssp STTCCGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------------CHHHHHHHHHTTCC---CCC
T ss_pred cccccccccChhhhc--CCCccchhchhhhHHHHHHHhccCCCCCCCC------------CHHHHHHHHhcCCc---CCC
Confidence 344567899999764 4578999999999999999999 89998643 22222222222110 000
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
.. .....+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 227 -----~~---~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 227 -----PR---LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp -----CT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----Cc---cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 01 1123577888899999999999999999999998753
No 57
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=7.4e-41 Score=369.34 Aligned_cols=246 Identities=27% Similarity=0.407 Sum_probs=202.2
Q ss_pred HhcccCcCCeEEEEEEEEcC-CcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
+.+.||+|+||.||+|++.. +..||||+++.... ..++|.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~ 302 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 302 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred eeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCC
Confidence 35789999999999999764 88999999986543 56789999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ...+++..++.|+.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 303 L~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 375 (495)
T 1opk_A 303 LLDYLRECN---RQEVSAVVLLYMATQISSAMEYLE----KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375 (495)
T ss_dssp HHHHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred HHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence 999998643 245899999999999999999999 789999999999999999999999999999876543
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++|||||||++|||+| |+.||.... ..+....+ .....
T Consensus 376 ~~~~~~~~~y~aPE~~~--~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~------------~~~~~~~~-~~~~~--- 437 (495)
T 1opk_A 376 HAGAKFPIKWTAPESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGID------------LSQVYELL-EKDYR--- 437 (495)
T ss_dssp CTTCCCCGGGCCHHHHH--HCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC------------GGGHHHHH-HTTCC---
T ss_pred cCCCcCCcceeCHhHHh--cCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC------------HHHHHHHH-HcCCC---
Confidence 223456899999765 4578999999999999999999 999986432 12222221 11110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
.... ......+.+++.+||+.||++|||+.||++.|+.+.
T Consensus 438 ----~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 438 ----MERP---EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp ----CCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ----CCCC---CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 0011 122345788889999999999999999999999875
No 58
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-40 Score=350.80 Aligned_cols=250 Identities=24% Similarity=0.361 Sum_probs=201.4
Q ss_pred hcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 131 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 131 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEec
Confidence 478999999999999974 348899999986433 3457899999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe
Q 005880 438 MPNGSLFWLLHGNRGP-------------------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL 498 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll 498 (672)
+++|+|.+++...... ....+++.+++.++.|+++||+||| +.+|+||||||+||++
T Consensus 132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIl~ 207 (343)
T 1luf_A 132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS----ERKFVHRDLATRNCLV 207 (343)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEE
T ss_pred CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCcceEEE
Confidence 9999999999864311 1256999999999999999999999 7899999999999999
Q ss_pred CCCCcEEEeccCCCccCCC-------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCC
Q 005880 499 DKTGNARVSDFGLSIFAPP-------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAG 570 (672)
Q Consensus 499 ~~~~~~kl~DfG~a~~~~~-------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~ 570 (672)
+.++.+||+|||+++.... ....++..|+|||++. +..++.++||||||+++|||+| |+.||...
T Consensus 208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~Di~slG~il~el~t~g~~p~~~~----- 280 (343)
T 1luf_A 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF--YNRYTTESDVWAYGVVLWEIFSYGLQPYYGM----- 280 (343)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----
T ss_pred CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhc--cCCcCcccccHHHHHHHHHHHhcCCCcCCCC-----
Confidence 9999999999999865432 2345677899999765 4578999999999999999999 99999643
Q ss_pred CCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 571 MGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
...+.......... .. .. ......+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 281 -------~~~~~~~~~~~~~~-~~-------~~---~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 281 -------AHEEVIYYVRDGNI-LA-------CP---ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp -------CHHHHHHHHHTTCC-CC-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -------ChHHHHHHHhCCCc-CC-------CC---CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 22222222222211 00 00 1123457888899999999999999999999999864
No 59
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4.9e-40 Score=347.51 Aligned_cols=241 Identities=22% Similarity=0.346 Sum_probs=196.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc------hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG------GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~ 96 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILEL 96 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEc
Confidence 478999999999999965 6899999999754322 357899999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC----cEEEeccCCCc
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG----NARVSDFGLSI 513 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~----~~kl~DfG~a~ 513 (672)
+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++ .+||+|||+++
T Consensus 97 ~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 97 VSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp CCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred CCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 9999999999643 35999999999999999999999 78999999999999998876 79999999998
Q ss_pred cCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 514 FAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 514 ~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
..... ...||+.|+|||++. +..++.++|||||||++|||++|+.||.... ..+....+...
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~------------~~~~~~~i~~~ 233 (361)
T 2yab_A 168 EIEDGVEFKNIFGTPEFVAPEIVN--YEPLGLEADMWSIGVITYILLSGASPFLGDT------------KQETLANITAV 233 (361)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHT--TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------------HHHHHHHHHTT
T ss_pred EcCCCCccccCCCCccEECchHHc--CCCCCccccHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHhc
Confidence 76543 456899999999764 4578999999999999999999999996432 22223222222
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .+++.. ... ....+.+++.+||..||++|||+.|+++
T Consensus 234 ~~---~~~~~~--~~~---~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 234 SY---DFDEEF--FSQ---TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CC---CCCHHH--HTT---SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CC---CCCchh--ccC---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11 011111 011 1235678888999999999999999974
No 60
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-41 Score=355.65 Aligned_cols=250 Identities=23% Similarity=0.334 Sum_probs=199.9
Q ss_pred hcccCcCCeEEEEEEEEc------CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|++. +++.||||+++... .....++.+|+.++++++||||+++++++.+....++||||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 155 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 155 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence 478999999999999953 46789999997543 33556789999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC---cEEEeccCCC
Q 005880 438 MPNGSLFWLLHGNRG--PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG---NARVSDFGLS 512 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~---~~kl~DfG~a 512 (672)
+++|+|.+++..... .....+++.+++.++.|+++||+||| +.+|+||||||+|||++.++ .+||+|||++
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE----ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 999999999976432 12245899999999999999999999 78999999999999999555 5999999999
Q ss_pred ccCC-------CCCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHH
Q 005880 513 IFAP-------PSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQ 584 (672)
Q Consensus 513 ~~~~-------~~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 584 (672)
+... .....+|..|+|||++. +..++.++|||||||++|||++ |+.||... ...+...
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~DvwslG~il~ellt~g~~pf~~~------------~~~~~~~ 297 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFM--EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK------------SNQEVLE 297 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------------CHHHHHH
T ss_pred cccccccccccCCCcCCcccEECHHHhc--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------------CHHHHHH
Confidence 6432 12344578899999765 4578999999999999999998 99999643 2222222
Q ss_pred HHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 585 SVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
........ + .. ......+.+++.+||+.||++|||+.||++.|+.+.+
T Consensus 298 ~i~~~~~~----~----~~---~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 298 FVTSGGRM----D----PP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp HHHTTCCC----C----CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCC----C----CC---ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 22222110 0 01 1122357788999999999999999999999998864
No 61
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.7e-40 Score=341.66 Aligned_cols=242 Identities=22% Similarity=0.368 Sum_probs=196.2
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc------hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG------GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
..+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 94 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEE
Confidence 4578999999999999965 6899999998754321 36789999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC----cEEEeccCCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG----NARVSDFGLS 512 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~----~~kl~DfG~a 512 (672)
|+++|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 95 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 95 LVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp CCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred cCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHH----HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 99999999999643 35899999999999999999999 78999999999999999887 8999999999
Q ss_pred ccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 513 IFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 513 ~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
+..... ...+|..|+|||++. +..++.++|||||||++|||++|+.||.... ..+.......
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------------~~~~~~~~~~ 231 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVN--YEPLGLEADMWSIGVITYILLSGASPFLGDT------------KQETLANVSA 231 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHT--TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------------HHHHHHHHHH
T ss_pred eECCCCCccccccCCcCcCCceeec--CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC------------HHHHHHHHHh
Confidence 876432 456889999999764 5678999999999999999999999996432 1222222221
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
... . +.... .. .....+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~--~-~~~~~--~~---~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 232 VNY--E-FEDEY--FS---NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp TCC--C-CCHHH--HT---TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cCC--C-cCccc--cc---cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 110 0 00000 00 11235778888999999999999999986
No 62
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=8.7e-41 Score=348.86 Aligned_cols=251 Identities=25% Similarity=0.365 Sum_probs=189.8
Q ss_pred HhcccCcCCeEEEEEEEEcC-C---cEEEEEEcccC--CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeE------
Q 005880 364 SAEMLGKGGFGTAYKAVLDD-G---SVVAVKRLKDA--SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEK------ 431 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~-g---~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~------ 431 (672)
..+.||+|+||.||+|+... + ..||||+++.. .....+++.+|++++++++||||+++++++......
T Consensus 27 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CE
T ss_pred EeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCcc
Confidence 45789999999999999653 3 27999999754 333567899999999999999999999999877655
Q ss_pred EEEEeecCCCChhHHhhcCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 432 LLVSEYMPNGSLFWLLHGNRG-PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 432 ~lv~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
++||||+++|+|.+++..... .....+++..++.++.|+++||+||| +.+|+||||||+||++++++.+||+|||
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH----~~~ivH~Dikp~NIli~~~~~~kl~Dfg 182 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS----SRNFIHRDLAARNCMLAEDMTVCVADFG 182 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH----cCCcccCCCCcceEEEcCCCCEEEeecc
Confidence 999999999999999965431 12235899999999999999999999 7899999999999999999999999999
Q ss_pred CCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHH
Q 005880 511 LSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRW 582 (672)
Q Consensus 511 ~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~ 582 (672)
+++..... ...++..|+|||++. +..++.++|||||||++|||++ |+.||..... .+.
T Consensus 183 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~------------~~~ 248 (323)
T 3qup_A 183 LSRKIYSGDYYRQGCASKLPVKWLALESLA--DNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN------------AEI 248 (323)
T ss_dssp C-----------------CCGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG------------GGH
T ss_pred ccccccccccccccccccCcccccCchhhc--CCCCCCccchhhHHHHHHHHHhCCCCCccccCh------------HHH
Confidence 99765432 233466899999764 4578999999999999999999 9999964321 122
Q ss_pred HHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 583 VQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.......... .........+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 249 ~~~~~~~~~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 249 YNYLIGGNRL-----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp HHHHHTTCCC-----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCC-----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 2222222110 0011223457888999999999999999999999999874
No 63
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=349.95 Aligned_cols=242 Identities=24% Similarity=0.359 Sum_probs=196.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~g 99 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLG 99 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999965 58999999986432 22456788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 100 GDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQ----NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp EEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 9999999754 35999999999999999999999 789999999999999999999999999999876443
Q ss_pred --CCCCCCcccCCCccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 --TVPRSNGYRAPELSSSD-GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~-~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...||..|+|||++... +..++.++|||||||++|||++|+.||...... ..............
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~---------~~~~~~~~~~~~~~---- 237 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST---------SSKEIVHTFETTVV---- 237 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS---------CHHHHHHHHHHCCC----
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc---------cHHHHHHHHhhccc----
Confidence 56789999999987542 346889999999999999999999999754321 22222222211110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCC-HHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPN-MSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-~~evl~ 636 (672)
... ......+.+++.+||+.||++||+ +.++.+
T Consensus 238 -----~~p---~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 -----TYP---SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -----CCC---TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -----CCC---CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 001 112245778888999999999998 666653
No 64
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=7.9e-41 Score=354.49 Aligned_cols=252 Identities=25% Similarity=0.333 Sum_probs=199.5
Q ss_pred HhcccCcCCeEEEEEEEE------cCCcEEEEEEcccCCc-chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCe-EEEE
Q 005880 364 SAEMLGKGGFGTAYKAVL------DDGSVVAVKRLKDASI-GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREE-KLLV 434 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~-~~lv 434 (672)
+.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|++++.++ +||||+++++++.+.+. .++|
T Consensus 26 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv 105 (359)
T 3vhe_A 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 105 (359)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEE
T ss_pred eceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEE
Confidence 357899999999999984 2458999999976433 3456799999999999 79999999999987554 8999
Q ss_pred EeecCCCChhHHhhcCCCCC------------------------------------------------------------
Q 005880 435 SEYMPNGSLFWLLHGNRGPG------------------------------------------------------------ 454 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~------------------------------------------------------------ 454 (672)
|||+++|+|.++++......
T Consensus 106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3vhe_A 106 VEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDL 185 (359)
T ss_dssp EECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CT
T ss_pred EEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccch
Confidence 99999999999998653210
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-------CCCCCCcc
Q 005880 455 -RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-------TVPRSNGY 526 (672)
Q Consensus 455 -~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-------~~~~t~~y 526 (672)
...+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..... ...+|..|
T Consensus 186 ~~~~l~~~~~~~~~~ql~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y 261 (359)
T 3vhe_A 186 YKDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 261 (359)
T ss_dssp TTTCBCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGG
T ss_pred hccccCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCcee
Confidence 123899999999999999999999 789999999999999999999999999999865332 33456789
Q ss_pred cCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccC
Q 005880 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKD 605 (672)
Q Consensus 527 ~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (672)
+|||++. +..++.++|||||||++|||+| |+.||..... .+.+............ .
T Consensus 262 ~aPE~~~--~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------------~~~~~~~~~~~~~~~~-------~-- 318 (359)
T 3vhe_A 262 MAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI------------DEEFCRRLKEGTRMRA-------P-- 318 (359)
T ss_dssp CCHHHHH--HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC------------SHHHHHHHHHTCCCCC-------C--
T ss_pred EChhhhc--CCCCCchhhhhhHHHHHHHHHhcCCCCCCccch------------hHHHHHHHHcCCCCCC-------C--
Confidence 9999765 4678999999999999999998 9999964321 1122222222211110 0
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 606 IEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 606 ~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
......+.+++.+||+.||++|||+.||++.|+++.+
T Consensus 319 -~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 319 -DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 1122357888899999999999999999999999864
No 65
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.2e-40 Score=347.57 Aligned_cols=241 Identities=22% Similarity=0.303 Sum_probs=191.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+++|+
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~ 91 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCc
Confidence 478999999999999965 789999999864332 234678999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC-----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP----- 517 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~----- 517 (672)
|.+++... ..+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 92 L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 92 LFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp GGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred HHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 99999744 35999999999999999999999 78999999999999999999999999999975432
Q ss_pred --CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 518 --STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 518 --~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
....+|..|+|||++.. ...++.++|||||||++|||++|+.||....... ........... .
T Consensus 163 ~~~~~~gt~~y~aPE~~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----------~~~~~~~~~~~---~ 227 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKR-REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-----------QEYSDWKEKKT---Y 227 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHC-SSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-----------HHHHHHHTTCT---T
T ss_pred ccCCCccCcCccCcHHhcc-CCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-----------HHHHHHhcccc---c
Confidence 24568899999998753 2334789999999999999999999997543211 11111111100 0
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. ........+.+++.+||+.||++|||+.|+++
T Consensus 228 ~~-------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 228 LN-------PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp ST-------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CC-------ccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00 00112235678888999999999999999975
No 66
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.3e-40 Score=363.58 Aligned_cols=247 Identities=28% Similarity=0.416 Sum_probs=198.1
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
..+.||+|+||.||+|...++..||||+++.... ..++|.+|++++++++||||+++++++.+ +..++||||+++|+|
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL 265 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 265 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBH
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCH
Confidence 3578999999999999998888899999986543 46789999999999999999999999865 678999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++.... ...+++..++.++.|+++||+||| +.+|+||||||+|||+++++.+||+|||+++.....
T Consensus 266 ~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 338 (452)
T 1fmk_A 266 LDFLKGET---GKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338 (452)
T ss_dssp HHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred HHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence 99997432 134899999999999999999999 789999999999999999999999999999866432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++. +..++.++|||||||++|||+| |+.||... ...+....+.....
T Consensus 339 ~~~~~~~~y~aPE~~~--~~~~~~~sDvwslG~~l~el~t~g~~P~~~~------------~~~~~~~~i~~~~~----- 399 (452)
T 1fmk_A 339 QGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVERGYR----- 399 (452)
T ss_dssp ----CCGGGSCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC------------CHHHHHHHHHTTCC-----
T ss_pred cCCcccccccCHhHHh--cCCCCccccHHhHHHHHHHHHhCCCCCCCCC------------CHHHHHHHHHcCCC-----
Confidence 233466899999765 4578999999999999999999 99999643 22222222222110
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
. +........+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 400 ---~---~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 400 ---M---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp ---C---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred ---C---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 0 00112334678889999999999999999999999988643
No 67
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3e-40 Score=335.66 Aligned_cols=242 Identities=26% Similarity=0.409 Sum_probs=185.8
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCc----chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI----GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|... |+.||||+++.... ...+.+.+|+++++.++||||+++++++.+++..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG 90 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCC
Confidence 478999999999999976 89999999875432 2346789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC---cEecCCCCCCEEeCC--------CCcEEEecc
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK---LTHGNIKSTNVLLDK--------TGNARVSDF 509 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~---iiH~Dlkp~NIll~~--------~~~~kl~Df 509 (672)
++|.+++.. ..+++..++.++.|+++||+||| +.+ |+||||||+||+++. ++.+||+||
T Consensus 91 ~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH----~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 91 GPLNRVLSG------KRIPPDILVNWAVQIARGMNYLH----DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHH----HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred CCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHH----hCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999963 34899999999999999999999 556 999999999999986 678999999
Q ss_pred CCCccCCCC---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 510 GLSIFAPPS---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 510 G~a~~~~~~---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
|+++..... ...++..|+|||++. +..++.++||||||+++|||++|+.||.... ........
T Consensus 161 g~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------------~~~~~~~~ 226 (271)
T 3dtc_A 161 GLAREWHRTTKMSAAGAYAWMAPEVIR--ASMFSKGSDVWSYGVLLWELLTGEVPFRGID------------GLAVAYGV 226 (271)
T ss_dssp CC-------------CCGGGSCHHHHH--HCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC------------HHHHHHHH
T ss_pred CcccccccccccCCCCccceeCHHHhc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHhh
Confidence 999765443 456788999999764 4578999999999999999999999996432 11111111
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 641 (672)
........ ........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 227 ~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 227 AMNKLALP----------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HTSCCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred hcCCCCCC----------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11111100 0011234578888899999999999999999999864
No 68
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=8.6e-41 Score=341.73 Aligned_cols=246 Identities=22% Similarity=0.319 Sum_probs=189.5
Q ss_pred HhcccCcCCeEEEEEEEEcC----CcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 364 SAEMLGKGGFGTAYKAVLDD----GSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
..+.||+|+||.||+|.... +..||+|+++... ....+.+.+|+.++++++||||+++++++ .++..++||||+
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~ 97 (281)
T 1mp8_A 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELC 97 (281)
T ss_dssp EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEecC
Confidence 35789999999999999642 4679999987543 33456799999999999999999999997 456789999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 98 ~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 98 TLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp TTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred CCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----hCCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 9999999997543 35899999999999999999999 789999999999999999999999999999766543
Q ss_pred ------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 519 ------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 519 ------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
...++..|+|||++. +..++.++||||||+++|||++ |+.||..... .+....+.....
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~------------~~~~~~i~~~~~ 235 (281)
T 1mp8_A 170 TYYKASKGKLPIKWMAPESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN------------NDVIGRIENGER 235 (281)
T ss_dssp ---------CCGGGCCHHHHH--HCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG------------GGHHHHHHTTCC
T ss_pred cccccccCCCcccccChhhcc--cCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH------------HHHHHHHHcCCC
Confidence 233466899999764 4578999999999999999997 9999964321 122222222111
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
. . .. ......+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 236 ~-~-------~~---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 236 L-P-------MP---PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp C-C-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C-C-------CC---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0 0 01 1123457788889999999999999999999999864
No 69
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-40 Score=350.32 Aligned_cols=242 Identities=22% Similarity=0.385 Sum_probs=198.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||.||+|... +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L 135 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 135 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcH
Confidence 478999999999999965 6899999999876555667899999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC--CCcEEEeccCCCccCCCC---
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK--TGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~--~~~~kl~DfG~a~~~~~~--- 518 (672)
.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 136 ~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 136 FDRIAAED----YKMSEAEVINYMRQACEGLKHMH----EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp HHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred HHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 99997542 35899999999999999999999 789999999999999974 578999999999876544
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||.... ..+.+..+....+. ++
T Consensus 208 ~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~elltg~~Pf~~~~------------~~~~~~~i~~~~~~---~~ 270 (387)
T 1kob_A 208 KVTTATAEFAAPEIVD--REPVGFYTDMWAIGVLGYVLLSGLSPFAGED------------DLETLQNVKRCDWE---FD 270 (387)
T ss_dssp EEECSSGGGCCHHHHT--TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS------------HHHHHHHHHHCCCC---CC
T ss_pred eeeccCCCccCchhcc--CCCCCCcccEeeHhHHHHHHHhCCCCCCCCC------------HHHHHHHHHhCCCC---CC
Confidence 346789999999764 4578999999999999999999999996432 22223322222111 11
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .. .....++.+++.+||+.||++|||+.|+++
T Consensus 271 ~~--~~---~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 271 ED--AF---SSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp SS--TT---TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cc--cc---ccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 10 01 112235778888999999999999999975
No 70
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.7e-40 Score=347.19 Aligned_cols=245 Identities=22% Similarity=0.368 Sum_probs=192.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCc----EEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGS----VVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.+.||+|+||.||+|+.. +|+ .||+|.++... ....+++.+|++++++++||||+++++++.+.. .++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~ 98 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLM 98 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEec
Confidence 478999999999999954 444 46888886432 335678999999999999999999999998754 78999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.+++.... ..+++..++.|+.|+++||+||| +.+|+||||||+||+++.++++||+|||+++.....
T Consensus 99 ~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 99 PFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLE----DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp TTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred CCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHh----hCCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 9999999998654 45999999999999999999999 789999999999999999999999999999765432
Q ss_pred -------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 519 -------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 519 -------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
...+|..|+|||++. +..++.++|||||||++|||+| |+.||..... .... ......
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------------~~~~-~~~~~~ 235 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA------------SEIS-SILEKG 235 (327)
T ss_dssp CC-------CCCGGGSCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG------------GGHH-HHHHTT
T ss_pred cccccccCCCccccccChHHhc--cCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH------------HHHH-HHHHcC
Confidence 233467899999765 5678999999999999999999 9999964321 1111 111111
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
... .........+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 236 ~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 236 ERL----------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CCC----------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred CCC----------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 100 0011223457888999999999999999999999999864
No 71
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.8e-40 Score=348.28 Aligned_cols=242 Identities=26% Similarity=0.407 Sum_probs=195.2
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+. .+|+.||||++..... ...+++.+|++++++++||||+++++++.+++..++||||++
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~- 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-
Confidence 46799999999999995 5789999999875432 234678999999999999999999999999999999999996
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-C
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-T 519 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-~ 519 (672)
|+|.+++.... .++++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..... .
T Consensus 138 g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 138 GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLH----SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence 68888886432 45899999999999999999999 789999999999999999999999999999876543 5
Q ss_pred CCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 520 VPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 520 ~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
..+|..|+|||++.. ....++.++|||||||++|||++|+.||... ...............
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~------------~~~~~~~~~~~~~~~------ 271 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM------------NAMSALYHIAQNESP------ 271 (348)
T ss_dssp CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------------CHHHHHHHHHHSCCC------
T ss_pred ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------------ChHHHHHHHHhcCCC------
Confidence 678999999998743 2457899999999999999999999999643 222222222222110
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
... .. .....+.+++.+||+.||++|||+.|+++.
T Consensus 272 ~~~-~~---~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 272 ALQ-SG---HWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp CCC-CT---TSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCC-CC---CCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000 01 112357788889999999999999999753
No 72
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=342.56 Aligned_cols=254 Identities=23% Similarity=0.358 Sum_probs=192.8
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCC--CCCceeeeEEEEEcC----CeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRL--RHPNLVGLKAYYFAR----EEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~----~~~~lv~e~ 437 (672)
..+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++... +||||+++++++... ...++||||
T Consensus 41 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 116 (337)
T 3mdy_A 41 MVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDY 116 (337)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECC
T ss_pred EEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEec
Confidence 3578999999999999986 899999998643 334455566665554 899999999999877 688999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCC--------CcEecCCCCCCEEeCCCCcEEEecc
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL--------KLTHGNIKSTNVLLDKTGNARVSDF 509 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--------~iiH~Dlkp~NIll~~~~~~kl~Df 509 (672)
+++|+|.++++.. .+++..++.++.|+++||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 117 ~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH----~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 186 (337)
T 3mdy_A 117 HENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLH----TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL 186 (337)
T ss_dssp CTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHH----SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred cCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHH----HhhhhhccCCCEEecccchHHEEECCCCCEEEEeC
Confidence 9999999999754 3899999999999999999999 66 9999999999999999999999999
Q ss_pred CCCccCCCC---------CCCCCCcccCCCccccCCCCCCc------hhHHHHHHHHHHHHHhCC----------CCCCC
Q 005880 510 GLSIFAPPS---------TVPRSNGYRAPELSSSDGRKQSQ------KSDVYSFGVLLLELLTGK----------CPSVI 564 (672)
Q Consensus 510 G~a~~~~~~---------~~~~t~~y~aPE~l~~~~~~~~~------~~DV~S~Gvvl~el~tg~----------~P~~~ 564 (672)
|+++..... ...+|..|+|||++.. ...+. ++|||||||++|||+||. .||..
T Consensus 187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE--SLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp TTCEECC---------CCSSCSCGGGCCHHHHTT--CCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred CCceeeccccccccCCCCCCccCcceeChhhccc--ccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence 999765432 3467899999997753 23333 499999999999999994 44433
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 565 DGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
.... ...... ........... +.........+....+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 265 ~~~~-------~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 265 LVPS-------DPSYED-MREIVCIKKLR----PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp TSCS-------SCCHHH-HHHHHTTSCCC----CCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred hcCC-------CCchhh-hHHHHhhhccC----ccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 2111 111111 11111111111 11111111235667789999999999999999999999999998754
Q ss_pred C
Q 005880 645 E 645 (672)
Q Consensus 645 ~ 645 (672)
.
T Consensus 333 ~ 333 (337)
T 3mdy_A 333 Q 333 (337)
T ss_dssp T
T ss_pred c
Confidence 3
No 73
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.3e-40 Score=342.81 Aligned_cols=252 Identities=27% Similarity=0.368 Sum_probs=201.8
Q ss_pred HhcccCcCCeEEEEEEEE------cCCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVL------DDGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
..+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 357899999999999985 245889999997543 3345788999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEE
Q 005880 437 YMPNGSLFWLLHGNRGP-------------------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVL 497 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIl 497 (672)
|+++|+|.+++...... ....+++.+++.++.|+++||+||| +.+|+||||||+||+
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dikp~NIl 182 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA----EMKLVHRDLAARNIL 182 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH----HCCCcccccchheEE
Confidence 99999999999865421 1234899999999999999999999 789999999999999
Q ss_pred eCCCCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCC
Q 005880 498 LDKTGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGA 569 (672)
Q Consensus 498 l~~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~ 569 (672)
++.++.+||+|||+++..... ...++..|+|||++. +..++.++|||||||++|||+| |+.||.....
T Consensus 183 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-- 258 (314)
T 2ivs_A 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP-- 258 (314)
T ss_dssp EETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHH--HCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcccccChhhhc--CCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 999999999999999765432 334567899999764 4578999999999999999999 9999964321
Q ss_pred CCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 570 GMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
...... ........ .. ......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 259 ----------~~~~~~-~~~~~~~~-------~~---~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 259 ----------ERLFNL-LKTGHRME-------RP---DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp ----------GGHHHH-HHTTCCCC-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ----------HHHHHH-hhcCCcCC-------CC---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 111111 11111100 01 11234578888899999999999999999999998653
No 74
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=6.5e-40 Score=336.67 Aligned_cols=251 Identities=27% Similarity=0.439 Sum_probs=190.1
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
..+.||+|+||.||+|+.. ..||||+++... ....+.+.+|++++++++||||+++++++ .....++||||++++
T Consensus 28 ~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~ 104 (289)
T 3og7_A 28 VGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred eeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCC
Confidence 3478999999999999865 359999987543 23457899999999999999999999965 566789999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC----
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP---- 517 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~---- 517 (672)
+|.+++.... ..+++.+++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 105 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 105 SLYHHLHASE----TKFEMKKLIDIARQTARGMDYLH----AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp EHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred cHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH----hCCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 9999996543 45999999999999999999999 78999999999999999999999999999975543
Q ss_pred ---CCCCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 518 ---STVPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 518 ---~~~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
....+|..|+|||++.. .+..++.++||||||+++|||++|+.||..... ...+..........
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------------~~~~~~~~~~~~~~ 244 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN------------RDQIIEMVGRGSLS 244 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC------------HHHHHHHHHHTSCC
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch------------HHHHHHHhcccccC
Confidence 13457899999997642 245678899999999999999999999964321 11222222222111
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.... .. .......+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 245 ~~~~----~~--~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 245 PDLS----KV--RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCTT----SS--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cchh----hc--cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1100 00 01223467888999999999999999999999999864
No 75
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=6.7e-40 Score=336.38 Aligned_cols=250 Identities=22% Similarity=0.303 Sum_probs=192.6
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|+..+|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++ +
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 85 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-D 85 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-E
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-C
Confidence 478999999999999998899999999865432 2347788999999999999999999999999999999999975 9
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 86 LKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCH----DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp HHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred HHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 999987543 35899999999999999999999 789999999999999999999999999998755422
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc-----
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT----- 592 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 592 (672)
...+|..|+|||++.. ...++.++|||||||++|||++|+.||.... ..+......+....
T Consensus 158 ~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~~l~~g~~pf~~~~------------~~~~~~~~~~~~~~~~~~~ 224 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMG-SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS------------EADQLMRIFRILGTPNSKN 224 (288)
T ss_dssp ----CCCTTCCHHHHTT-CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS------------HHHHHHHHHHHHCCCCTTT
T ss_pred ccccccccccCchheeC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHHHHCCCChhh
Confidence 3457889999997642 3468999999999999999999999996432 11112222111000
Q ss_pred ------ccccchhhccc------cChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 593 ------AEVFDLELMRY------KDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 593 ------~~~~d~~~~~~------~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
...+++..... .........+.+++.+||+.||++|||+.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp STTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00011110000 000112245678888999999999999999974
No 76
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.2e-39 Score=345.42 Aligned_cols=242 Identities=23% Similarity=0.326 Sum_probs=195.9
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
..+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g 112 (362)
T 2bdw_A 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 4578999999999999965 689999999975432 3456789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC---CcEEEeccCCCccCCC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT---GNARVSDFGLSIFAPP 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~---~~~kl~DfG~a~~~~~ 517 (672)
|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.+ +.+||+|||++.....
T Consensus 113 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 113 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCH----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 9999998743 35899999999999999999999 7899999999999999865 4599999999987654
Q ss_pred C----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 518 S----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 518 ~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
. ...+|+.|+|||++. +..++.++|||||||++|||++|+.||... +.......+.......
T Consensus 184 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~~ll~g~~Pf~~~------------~~~~~~~~i~~~~~~~ 249 (362)
T 2bdw_A 184 SEAWHGFAGTPGYLSPEVLK--KDPYSKPVDIWACGVILYILLVGYPPFWDE------------DQHRLYAQIKAGAYDY 249 (362)
T ss_dssp CCSCCCSCSCTTTCCHHHHT--TCCCCTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHTCCCC
T ss_pred CcccccCCCCccccCHHHHc--cCCCCchhhHHHHHHHHHHHHHCCCCCCCC------------CHHHHHHHHHhCCCCC
Confidence 3 356899999999764 457899999999999999999999999643 2222333322221110
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..+ .. ......+.+++.+||+.||++|||+.|+++
T Consensus 250 --~~~---~~---~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 250 --PSP---EW---DTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp --CTT---GG---GGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --Ccc---cc---cCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000 00 112245778888999999999999999875
No 77
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=349.77 Aligned_cols=237 Identities=23% Similarity=0.329 Sum_probs=192.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|+.. +|+.||||++++.. ....+.+.+|.+++..+ +||||+++++++.+.+..++||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999965 68999999997532 22456678899999988 79999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
+|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++++||+|||+++....
T Consensus 108 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 108 GGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLH----DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 99999999754 34899999999999999999999 78999999999999999999999999999986432
Q ss_pred ---CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 518 ---STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 518 ---~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
....||+.|+|||++. +..++.++|||||||++|||++|+.||... +..+....+......
T Consensus 179 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~G~~Pf~~~------------~~~~~~~~i~~~~~~-- 242 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQ--EMLYGPAVDWWAMGVLLYEMLCGHAPFEAE------------NEDDLFEAILNDEVV-- 242 (353)
T ss_dssp -------CCGGGCCHHHHH--HHHCTTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHCCCC--
T ss_pred ccccccCCCcCeEChhhcC--CCCcCCccCCCcchHHHHHHHhCCCCCCCC------------CHHHHHHHHHcCCCC--
Confidence 2456899999999775 457899999999999999999999999643 223333333332211
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH------HHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM------SHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~------~evl~ 636 (672)
.... ....+.+++.+||+.||++||++ .|+++
T Consensus 243 -------~p~~---~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 243 -------YPTW---LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -------CCTT---SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -------CCCC---CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 0111 12346778889999999999998 66654
No 78
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=353.44 Aligned_cols=242 Identities=21% Similarity=0.313 Sum_probs=195.1
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.+.||+|+||.||+|.. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++||||+++
T Consensus 15 i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~g 94 (444)
T 3soa_A 15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 94 (444)
T ss_dssp EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence 357899999999999995 4789999999875443 2456789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC---CCCcEEEeccCCCccCCC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD---KTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~---~~~~~kl~DfG~a~~~~~ 517 (672)
|+|.+.+... ..+++..+..++.|+++||+||| +.+|+||||||+||+++ .++.+||+|||+++....
T Consensus 95 g~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH----~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 95 GELFEDIVAR-----EYYSEADASHCIQQILEAVLHCH----QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp CBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 9999998754 34899999999999999999999 78999999999999998 467899999999976654
Q ss_pred C-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 518 S-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 518 ~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
. ...||+.|+|||++. +..++.++||||+||++|||++|+.||... +..+....+.....
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~--~~~~~~~~DIwSlGvilyell~G~~Pf~~~------------~~~~~~~~i~~~~~- 230 (444)
T 3soa_A 166 EQQAWFGFAGTPGYLSPEVLR--KDPYGKPVDLWACGVILYILLVGYPPFWDE------------DQHRLYQQIKAGAY- 230 (444)
T ss_dssp TCCBCCCSCSCGGGCCHHHHT--TCCBCTHHHHHHHHHHHHHHHHSSCSCCCS------------SHHHHHHHHHHTCC-
T ss_pred CCceeecccCCcccCCHHHhc--CCCCCCccccHHHHHHHHHHHhCCCCCCCc------------cHHHHHHHHHhCCC-
Confidence 3 456899999999764 457899999999999999999999999643 22223333322211
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+........ ....+.+++.+||+.||++|||+.|+++
T Consensus 231 ----~~~~~~~~~---~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 231 ----DFPSPEWDT---VTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp ----CCCTTTTTT---SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ----CCCcccccc---CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 100001111 2235778888999999999999999986
No 79
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-40 Score=339.62 Aligned_cols=237 Identities=23% Similarity=0.345 Sum_probs=196.5
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +|+.||+|++++.. ....+.+.+|..+++.++||||+++++++.+.+..++||||+++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~g 90 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCC
Confidence 478999999999999965 68999999997532 22456788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 91 GELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLH----SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp CBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 9999999754 34899999999999999999999 889999999999999999999999999999876543
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...+|+.|+|||++. +..++.++|||||||++|||++|+.||... +.......+.....
T Consensus 162 ~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~------------~~~~~~~~i~~~~~------- 220 (318)
T 1fot_A 162 TLCGTPDYIAPEVVS--TKPYNKSIDWWSFGILIYEMLAGYTPFYDS------------NTMKTYEKILNAEL------- 220 (318)
T ss_dssp CCCSCTTTCCHHHHT--TCCBCTTHHHHHHHHHHHHHHHSSCTTCCS------------SHHHHHHHHHHCCC-------
T ss_pred cccCCccccCHhHhc--CCCCCcccchhhhHHHHHHHHhCCCCCCCC------------CHHHHHHHHHhCCC-------
Confidence 567899999999764 457899999999999999999999999643 22233333333211
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 636 (672)
..... ...++.+++.+||..||++|| ++.|+++
T Consensus 221 --~~p~~---~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 221 --RFPPF---FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp --CCCTT---SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCCCC---CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 00111 123567888899999999999 8888874
No 80
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.3e-40 Score=347.44 Aligned_cols=254 Identities=24% Similarity=0.365 Sum_probs=202.2
Q ss_pred HhcccCcCCeEEEEEEEEc--------CCcEEEEEEcccCCc-chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD--------DGSVVAVKRLKDASI-GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLL 433 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 433 (672)
..+.||+|+||.||+|+.. ++..||||+++.... ...+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 4578999999999999863 467899999975432 3456789999999999 89999999999999999999
Q ss_pred EEeecCCCChhHHhhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC
Q 005880 434 VSEYMPNGSLFWLLHGNRGP-----------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG 502 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~ 502 (672)
||||+++|+|.+++...... ....+++..++.++.|+++||+||| +.+|+||||||+||+++.++
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~ 194 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA----SQKCIHRDLAARNVLVTENN 194 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTC
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCccceEEEcCCC
Confidence 99999999999999865421 1234899999999999999999999 78999999999999999999
Q ss_pred cEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCC
Q 005880 503 NARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCG 574 (672)
Q Consensus 503 ~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~ 574 (672)
.+||+|||+++..... ...++..|+|||++. +..++.++||||||+++|||++ |+.||...
T Consensus 195 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~ellt~g~~p~~~~--------- 263 (334)
T 2pvf_A 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--------- 263 (334)
T ss_dssp CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHH--HCEECHHHHHHHHHHHHHHHHTTSCCSSTTC---------
T ss_pred CEEEccccccccccccccccccCCCCcccceeChHHhc--CCCcChHHHHHHHHHHHHHHHhCCCCCcCcC---------
Confidence 9999999999765432 234567899999764 4578999999999999999999 99998642
Q ss_pred CCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCC
Q 005880 575 GAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEV 646 (672)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 646 (672)
...+......... ... .. ......+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 264 ---~~~~~~~~~~~~~-~~~-------~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 264 ---PVEELFKLLKEGH-RMD-------KP---ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp ---CHHHHHHHHHHTC-CCC-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ---CHHHHHHHHhcCC-CCC-------CC---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 2222222222211 000 00 1122457888889999999999999999999999976443
No 81
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.1e-40 Score=341.92 Aligned_cols=256 Identities=25% Similarity=0.326 Sum_probs=194.2
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCe----EEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREE----KLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----~~lv~e 436 (672)
.+.||+|+||.||+|+. .+++.||||+++.... .....+.+|++++.+++||||+++++++..... .++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 47899999999999995 5789999999976432 234578999999999999999999999876543 499999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|+++|+|.++++.. .++++.+++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 97 ~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 97 YVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSH----QNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp CCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred cCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 99999999999754 35899999999999999999999 7899999999999999999999999999997654
Q ss_pred CC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 517 PS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 517 ~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
.. ...+|..|+|||++. +..++.++|||||||++|||++|+.||... ...........
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~~l~~ll~g~~pf~~~------------~~~~~~~~~~~ 233 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQAR--GDSVDARSDVYSLGCVLYEVLTGEPPFTGD------------SPVSVAYQHVR 233 (311)
T ss_dssp --------------CCTTCCHHHHH--TCCCCHHHHHHHHHHHHHHHHHSSCSCCCS------------SHHHHHHHHHH
T ss_pred ccccccccccccCcCcccCCHHHhc--CCCCCchHhHHHHHHHHHHHHhCCCCCCCC------------ChHHHHHHHhc
Confidence 32 345789999999764 557899999999999999999999999643 22222222222
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH-HHHHHHHHHHhcCCCCCCCC
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM-SHVVKLIEELRGVEVSPCHE 651 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~-~evl~~L~~i~~~~~~~~~~ 651 (672)
..... +.. ... .....+.+++.+||+.||++||++ +++.+.+..+.....+..+.
T Consensus 234 ~~~~~----~~~-~~~---~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~~ 289 (311)
T 3ork_A 234 EDPIP----PSA-RHE---GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPK 289 (311)
T ss_dssp CCCCC----HHH-HST---TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCSSCC
T ss_pred CCCCC----ccc-ccC---CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCCCCc
Confidence 21110 000 011 122457788889999999999955 55556777766554444333
No 82
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=7.8e-40 Score=340.70 Aligned_cols=255 Identities=24% Similarity=0.313 Sum_probs=186.2
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
..+.||+|+||.||+|... +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+++..++||||++ |
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~ 87 (317)
T 2pmi_A 9 QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-N 87 (317)
T ss_dssp ----------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-C
T ss_pred EeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-C
Confidence 4578999999999999954 689999999875432 245778899999999999999999999999999999999997 6
Q ss_pred ChhHHhhcCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 442 SLFWLLHGNRG-PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 442 ~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
+|.+++..... .....+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 163 (317)
T 2pmi_A 88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH----ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN 163 (317)
T ss_dssp BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC
T ss_pred CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc
Confidence 99998865321 12245899999999999999999999 789999999999999999999999999999765432
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc----
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW---- 591 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 591 (672)
...+|..|+|||++.. ...++.++|||||||++|||++|+.||..... .+....+.....
T Consensus 164 ~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------------~~~~~~i~~~~~~~~~ 230 (317)
T 2pmi_A 164 TFSSEVVTLWYRAPDVLMG-SRTYSTSIDIWSCGCILAEMITGKPLFPGTND------------EEQLKLIFDIMGTPNE 230 (317)
T ss_dssp CCCCCCSCCTTCCHHHHTT-CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------------HHHHHHHHHHHCSCCT
T ss_pred cCCCCcccccccCchHhhC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------------HHHHHHHHHHhCCCCh
Confidence 4467889999998642 34689999999999999999999999964321 111111111000
Q ss_pred --ccc-----ccchhhcc--ccCh---------HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 --TAE-----VFDLELMR--YKDI---------EEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 --~~~-----~~d~~~~~--~~~~---------~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
... .+.+.... .... ......+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 231 SLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp TTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000 00000000 0000 012246788999999999999999999864
No 83
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=9e-40 Score=342.13 Aligned_cols=239 Identities=22% Similarity=0.326 Sum_probs=189.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC-------------
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE------------- 429 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------------- 429 (672)
.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~ 90 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWL 90 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhh
Confidence 478999999999999976 79999999997433 335678999999999999999999999986543
Q ss_pred --------------------------------------------eEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHH
Q 005880 430 --------------------------------------------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLK 465 (672)
Q Consensus 430 --------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~ 465 (672)
..++||||+++|+|.+++..... .....+..++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~ 168 (332)
T 3qd2_B 91 KDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDREHGVCLH 168 (332)
T ss_dssp -----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSCHHHHHH
T ss_pred ccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchhhHHHHH
Confidence 27899999999999999986542 34567888999
Q ss_pred HHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----------------CCCCCCcccC
Q 005880 466 IAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-----------------TVPRSNGYRA 528 (672)
Q Consensus 466 i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-----------------~~~~t~~y~a 528 (672)
++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..... ...+|..|+|
T Consensus 169 i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 169 IFIQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHH----hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 9999999999999 789999999999999999999999999999766442 2457889999
Q ss_pred CCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHH
Q 005880 529 PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEE 608 (672)
Q Consensus 529 PE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (672)
||++. +..++.++|||||||++|||++|..|+.. ........ .... .......
T Consensus 245 PE~~~--~~~~~~~~Di~slG~il~el~~~~~~~~~--------------~~~~~~~~-~~~~----------~~~~~~~ 297 (332)
T 3qd2_B 245 PEQIH--GNNYSHKVDIFSLGLILFELLYSFSTQME--------------RVRIITDV-RNLK----------FPLLFTQ 297 (332)
T ss_dssp HHHHH--CCCCCTHHHHHHHHHHHHHHHSCCCCHHH--------------HHHHHHHH-HTTC----------CCHHHHH
T ss_pred hHHhc--CCCCcchhhHHHHHHHHHHHHHcCCChhH--------------HHHHHHHh-hccC----------CCccccc
Confidence 99765 45789999999999999999998776421 01111111 1100 0011123
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 609 EMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 609 ~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....+.+++.+||+.||++|||+.|+++
T Consensus 298 ~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 298 KYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred CChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 3456788999999999999999999975
No 84
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=6.1e-40 Score=351.67 Aligned_cols=195 Identities=23% Similarity=0.306 Sum_probs=169.9
Q ss_pred hcccCcC--CeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKG--GFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G--~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+| +||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 109 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccC
Confidence 4789999 99999999976 69999999997543 2345678899999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
+|+|.+++..... ..+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||.+.....
T Consensus 110 ~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 110 YGSAKDLICTHFM---DGMNELAIAYILQGVLKALDYIH----HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp TCBHHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred CCCHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 9999999986532 35899999999999999999999 78999999999999999999999999998754321
Q ss_pred ----------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 005880 518 ----------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDG 566 (672)
Q Consensus 518 ----------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~ 566 (672)
....+|..|+|||++......++.++|||||||++|||++|+.||....
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 1346788899999876443678999999999999999999999997543
No 85
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.5e-40 Score=369.42 Aligned_cols=243 Identities=26% Similarity=0.324 Sum_probs=196.6
Q ss_pred ccCcCCeEEEEEEEEc---CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 367 MLGKGGFGTAYKAVLD---DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.||+|+||.||+|.+. ++..||||+++... ....++|.+|++++++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999864 46789999998643 3356889999999999999999999999976 56899999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ..+++..+..|+.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 422 L~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~LH----~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 422 LHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLE----EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp HHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred HHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH----HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 999997543 45999999999999999999999 789999999999999999999999999999876432
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
...++..|+|||++. +..++.++|||||||++|||+| |+.||.... ..+....+......
T Consensus 494 ~~~~~~~~~~~y~APE~~~--~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~------------~~~~~~~i~~~~~~- 558 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECIN--FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK------------GPEVMAFIEQGKRM- 558 (613)
T ss_dssp --------CCTTSCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------------SHHHHHHHHTTCCC-
T ss_pred eeccCCCCccceeCHhhhc--CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC------------HHHHHHHHHcCCCC-
Confidence 122346899999764 4578999999999999999998 999996432 12222222221110
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.. .......+.+++.+||+.||++||++.+|++.|+.+..
T Consensus 559 -------~~---p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 559 -------EC---PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp -------CC---CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -------CC---CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 00 11233467889999999999999999999999999753
No 86
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5e-40 Score=349.41 Aligned_cols=251 Identities=27% Similarity=0.387 Sum_probs=191.2
Q ss_pred hcccCcCCeEEEEEEEEc--CC--cEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEc-CCeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLD--DG--SVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFA-REEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~--~g--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~ 438 (672)
.+.||+|+||.||+|... ++ ..||||.++... ....++|.+|+.++++++||||+++++++.. ++..++||||+
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~ 173 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECC
Confidence 468999999999999954 22 468999987533 3356789999999999999999999999765 45789999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 174 ~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 174 KHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLA----SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp TTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHH----HCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999997543 45889999999999999999999 789999999999999999999999999999765332
Q ss_pred ---------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 519 ---------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 519 ---------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
...++..|+|||++. +..++.++|||||||++|||+| |.+||...... +.. .....
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~---------~~~---~~~~~ 311 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---------DIT---VYLLQ 311 (373)
T ss_dssp ------------CCGGGSCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS---------CHH---HHHHT
T ss_pred ccccccccCCCCCcccccChHHhc--CCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH---------HHH---HHHHc
Confidence 233466799999765 4678999999999999999999 67777543211 111 11111
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSP 648 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 648 (672)
... ... . ......+.+++.+||+.||++|||+.|+++.|+++...-...
T Consensus 312 ~~~---~~~-----p---~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 312 GRR---LLQ-----P---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp TCC---CCC-----C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred CCC---CCC-----C---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 110 000 1 112235788889999999999999999999999997544433
No 87
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.3e-39 Score=334.96 Aligned_cols=251 Identities=22% Similarity=0.285 Sum_probs=191.3
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+++..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ- 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-
Confidence 478999999999999965 689999999975332 2357889999999999999999999999999999999999975
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
++.+.+.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH----~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 86 DLKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCH----SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 6666555432 35999999999999999999999 789999999999999999999999999999765432
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc--c
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA--E 594 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 594 (672)
...+|..|+|||++.. ...++.++|||||||++|||++|..||.... +..+....+.+..... +
T Consensus 158 ~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~~l~~~~~p~~~~~-----------~~~~~~~~i~~~~~~~~~~ 225 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFG-AKLYSTSIDMWSAGCIFAELANAGRPLFPGN-----------DVDDQLKRIFRLLGTPTEE 225 (292)
T ss_dssp CCSCCSCGGGCCHHHHTT-CSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS-----------SHHHHHHHHHHHHCCCCTT
T ss_pred ccCCccccCCcChHHHcC-CCCcCchHHHHHHHHHHHHHHHcCCCCcCCC-----------CHHHHHHHHHHHhCCCChh
Confidence 4456889999997643 2347999999999999999999988865321 2222222222211000 0
Q ss_pred cc-------ch--------hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VF-------DL--------ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~-------d~--------~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. +. ..............+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 226 QWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 00 00000000112345678888999999999999999974
No 88
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.4e-40 Score=342.66 Aligned_cols=236 Identities=25% Similarity=0.327 Sum_probs=191.5
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|.. .+|+.||||++..... .....+.+|+++++.++||||+++++++.+.+..++||||+ +
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~ 92 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-G 92 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-C
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-C
Confidence 47899999999999996 5789999999864321 23467899999999999999999999999999999999999 7
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... ..+++.++..++.|+++||+||| +.+|+||||||+||++++++.+||+|||++......
T Consensus 93 g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 93 GELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCH----RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp EEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH----HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 8999988654 34899999999999999999999 779999999999999999999999999999866543
Q ss_pred --CCCCCCcccCCCccccCCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRK-QSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~-~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...+|+.|+|||++. +.. .++++|||||||++|||++|+.||.......... .+
T Consensus 164 ~~~~~gt~~y~aPE~~~--~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~---------------------~i 220 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVIN--GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK---------------------KV 220 (336)
T ss_dssp TCCCTTSTTTSCGGGSC--CSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC---------------------CC
T ss_pred cccccCCcCcCCHHHHc--CCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH---------------------HH
Confidence 456889999999775 334 3789999999999999999999997543221100 00
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.......... ....+.+++.+||+.||.+|||+.|+++
T Consensus 221 ~~~~~~~p~~---~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 221 NSCVYVMPDF---LSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CSSCCCCCTT---SCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred HcCCCCCccc---CCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 0000000111 1235678888999999999999999975
No 89
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.9e-40 Score=342.13 Aligned_cols=252 Identities=27% Similarity=0.384 Sum_probs=202.3
Q ss_pred HhcccCcCCeEEEEEEEE------cCCcEEEEEEcccCCc-chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVL------DDGSVVAVKRLKDASI-GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 435 (672)
..+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 357899999999999985 3468999999975433 3457899999999999 9999999999999999999999
Q ss_pred eecCCCChhHHhhcCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC
Q 005880 436 EYMPNGSLFWLLHGNRG-------------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG 502 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~-------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~ 502 (672)
||+++|+|.+++..... .....+++..++.++.|+++||+||| +.+|+||||||+||+++.++
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~ 182 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA----SKNCIHRDLAARNILLTHGR 182 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEETTT
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCccceEEEcCCC
Confidence 99999999999986542 11235899999999999999999999 78999999999999999999
Q ss_pred cEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCC
Q 005880 503 NARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCG 574 (672)
Q Consensus 503 ~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~ 574 (672)
.+||+|||+++..... ...++..|+|||++. +..++.++||||||+++|||+| |+.||.....
T Consensus 183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------- 253 (313)
T 1t46_A 183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF--NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV------- 253 (313)
T ss_dssp EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS-------
T ss_pred CEEEccccccccccccccceeccCCCCcceeeChHHhc--CCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc-------
Confidence 9999999999876543 223456799999765 4578999999999999999999 9999964321
Q ss_pred CCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 575 GAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.........+..... .. ......+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 254 -----~~~~~~~~~~~~~~~-------~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 254 -----DSKFYKMIKEGFRML-------SP---EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp -----SHHHHHHHHHTCCCC-------CC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----hhHHHHHhccCCCCC-------Cc---ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 111222222221100 00 1123457888889999999999999999999999875
No 90
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.6e-40 Score=338.34 Aligned_cols=246 Identities=25% Similarity=0.359 Sum_probs=197.2
Q ss_pred hcccCcCCeEEEEEEEEc-CC-------cEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVLD-DG-------SVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
.+.||+|+||.||+|+.. ++ ..||+|++........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 92 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQE 92 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEE
Confidence 478999999999999954 33 5799999987666677889999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc--------EEEec
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN--------ARVSD 508 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~--------~kl~D 508 (672)
|+++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++. +||+|
T Consensus 93 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 93 FVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLE----ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp CCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred CCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHh----hCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence 999999999998643 34899999999999999999999 789999999999999998887 99999
Q ss_pred cCCCccCCCC-CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 509 FGLSIFAPPS-TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 509 fG~a~~~~~~-~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
||++...... ...++..|+|||++.. ...++.++|||||||++|||++|..|+.... +.........
T Consensus 165 fg~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~il~el~~g~~~~~~~~-----------~~~~~~~~~~ 232 (289)
T 4fvq_A 165 PGISITVLPKDILQERIPWVPPECIEN-PKNLNLATDKWSFGTTLWEICSGGDKPLSAL-----------DSQRKLQFYE 232 (289)
T ss_dssp CCSCTTTSCHHHHHHTTTTSCHHHHHC-GGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----------CHHHHHHHHH
T ss_pred CcccccccCccccCCcCcccCHHHhCC-CCCCCchhHHHHHHHHHHHHHcCCCCCcccc-----------chHHHHHHhh
Confidence 9999765443 3346788999997653 2568999999999999999999655543221 1111111111
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
..... . .. ....+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 233 ~~~~~----~------~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 233 DRHQL----P------AP---KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp TTCCC----C------CC---SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred ccCCC----C------CC---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 11000 0 00 11246788889999999999999999999998764
No 91
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=9.9e-40 Score=340.99 Aligned_cols=243 Identities=21% Similarity=0.365 Sum_probs=178.6
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
+.||+|+||.||+|... +|+.||||++... ....+.+|++++..++ ||||+++++++.++...++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 67999999999999965 6899999998643 4567889999999997 99999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC---cEEEeccCCCccCCCC--
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG---NARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~---~~kl~DfG~a~~~~~~-- 518 (672)
.+++... ..+++.++..++.|+++||+||| +.+|+||||||+||+++.++ .+||+|||+++.....
T Consensus 94 ~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 94 FERIKKK-----KHFSETEASYIMRKLVSAVSHMH----DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp HHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 9999864 35999999999999999999999 78999999999999998765 8999999999865443
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||....... ......+....+......
T Consensus 165 ~~~~~~~t~~y~aPE~~~--~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----~~~~~~~~~~~i~~~~~~--- 234 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLN--QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL-----TCTSAVEIMKKIKKGDFS--- 234 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC------------CCCHHHHHHHHTTTCCC---
T ss_pred cccccCCCcCccCHHHhc--CCCCCCccchHHHHHHHHHHHhCCCCCCCCcccc-----ccccHHHHHHHHHcCCCC---
Confidence 445688999999764 5678999999999999999999999997543211 011222233222222110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVV 635 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 635 (672)
+.. ........++.+++.+||+.||++|||+.|++
T Consensus 235 ~~~-----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell 269 (325)
T 3kn6_A 235 FEG-----EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR 269 (325)
T ss_dssp CCS-----HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred CCc-----ccccCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence 000 00011234578888899999999999999986
No 92
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=8e-40 Score=344.74 Aligned_cols=237 Identities=21% Similarity=0.272 Sum_probs=196.3
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 125 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 478999999999999965 68999999986532 22456788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 126 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 126 GEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp CBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCcccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 99999997542 4899999999999999999999 789999999999999999999999999999876543
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...||+.|+|||++. +..++.++|||||||++|||++|+.||... +..+....+.....
T Consensus 197 ~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~g~~Pf~~~------------~~~~~~~~i~~~~~------- 255 (350)
T 1rdq_E 197 TLCGTPEALAPEIIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFAD------------QPIQIYEKIVSGKV------- 255 (350)
T ss_dssp CCEECGGGCCHHHHT--TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHCCC-------
T ss_pred cccCCccccCHHHhc--CCCCCCcCCEecccHhHhHHhhCCCCCCCC------------CHHHHHHHHHcCCC-------
Confidence 456799999999765 457899999999999999999999999643 22333333333211
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPN-----MSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~ 636 (672)
..... ....+.+++.+||+.||++||+ +.|+++
T Consensus 256 --~~p~~---~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 256 --RFPSH---FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --CCCTT---CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCCCC---CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 00111 2235778888999999999998 777764
No 93
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.2e-40 Score=354.14 Aligned_cols=242 Identities=24% Similarity=0.327 Sum_probs=195.4
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +++.||+|++++... ...+.+.+|+++++.++||||+++++++.+++..++||||+++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 153 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 153 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 478999999999999965 589999999864221 1234588999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.++++.. .+++..+..++.|++.||+||| +.+|+||||||+|||++.++++||+|||+++.....
T Consensus 154 g~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH----~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 154 GDLVNLMSNY------DVPEKWARFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred CcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 9999999754 3899999999999999999999 789999999999999999999999999999766543
Q ss_pred ----CCCCCCcccCCCccccCCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 519 ----TVPRSNGYRAPELSSSDGR--KQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~--~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
...||+.|+|||++..... .++.++|||||||++|||++|+.||... +.......+......
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~------------~~~~~~~~i~~~~~~ 291 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD------------SLVGTYSKIMNHKNS 291 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS------------SHHHHHHHHHTHHHH
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC------------ChhhHHHHHHhcccc
Confidence 5678999999998764322 2789999999999999999999999643 233333443332211
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQ--RPNMSHVVK 636 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~ 636 (672)
.... ..... ...+.+++.+||..+|.+ ||++.||++
T Consensus 292 ~~~p-----~~~~~---s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 292 LTFP-----DDNDI---SKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp CCCC-----TTCCC---CHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred ccCC-----Ccccc---cHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 1110 01111 234677888999999988 999999986
No 94
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=6.9e-40 Score=345.97 Aligned_cols=246 Identities=19% Similarity=0.286 Sum_probs=194.9
Q ss_pred HHhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-----cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 363 ASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-----IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+++..++|||
T Consensus 27 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 106 (351)
T 3c0i_A 27 ELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFE 106 (351)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 34578999999999999964 68999999986321 1246789999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc---EEEeccCCCc
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN---ARVSDFGLSI 513 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~---~kl~DfG~a~ 513 (672)
|+++|+|.+++..... ....+++..+..++.|+++||+||| +.+|+||||||+||+++.++. +||+|||+++
T Consensus 107 ~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~ 181 (351)
T 3c0i_A 107 FMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCH----DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI 181 (351)
T ss_dssp CCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECSSSTTCCEEECCCTTCE
T ss_pred CCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCChHHeEEecCCCCCcEEEecCccee
Confidence 9999999888764321 1235899999999999999999999 789999999999999986654 9999999997
Q ss_pred cCCCC-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 514 FAPPS-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 514 ~~~~~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
..... ...+|..|+|||++. +..++.++|||||||++|||++|+.||.... .........
T Consensus 182 ~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------------~~~~~~i~~ 246 (351)
T 3c0i_A 182 QLGESGLVAGGRVGTPHFMAPEVVK--REPYGKPVDVWGCGVILFILLSGCLPFYGTK-------------ERLFEGIIK 246 (351)
T ss_dssp ECCTTSCBCCCCCSCGGGCCHHHHT--TCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-------------HHHHHHHHH
T ss_pred EecCCCeeecCCcCCcCccCHHHHc--CCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-------------HHHHHHHHc
Confidence 76543 346889999999764 4578999999999999999999999996421 122222222
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.... ..+.. .. .....+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~---~~~~~--~~---~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 247 GKYK---MNPRQ--WS---HISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp TCCC---CCHHH--HT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCC---CCccc--cc---cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2110 11100 01 11245778888999999999999999975
No 95
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=5.8e-40 Score=341.60 Aligned_cols=257 Identities=24% Similarity=0.347 Sum_probs=199.1
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEc----CCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA----REEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|+. .+|+.||||++........+.+.+|++++++++||||+++++++.. ....++||||++
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~ 113 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCC
Confidence 47899999999999996 5789999999876665567889999999999999999999999873 347789999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+|+|.+++..... ....+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 114 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 188 (317)
T 2buj_A 114 RGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIH----AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188 (317)
T ss_dssp TCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEE
T ss_pred CCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEEcCCCCEEEEecCcchhccccc
Confidence 9999999975321 1246999999999999999999999 789999999999999999999999999998765421
Q ss_pred -------------CCCCCCcccCCCccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHH
Q 005880 519 -------------TVPRSNGYRAPELSSSD-GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQ 584 (672)
Q Consensus 519 -------------~~~~t~~y~aPE~l~~~-~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 584 (672)
...+|..|+|||++... ...++.++||||||+++|||++|+.||...... ......
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~--- 258 (317)
T 2buj_A 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK-------GDSVAL--- 258 (317)
T ss_dssp ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT-------TSCHHH---
T ss_pred ccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc-------cchhhH---
Confidence 12358899999976532 123688999999999999999999998532100 001111
Q ss_pred HHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 005880 585 SVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVS 647 (672)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 647 (672)
...... .. +........+.+++.+||+.||.+|||+.|+++.|+.+......
T Consensus 259 -~~~~~~-------~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 259 -AVQNQL-------SI---PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp -HHHCC---------C---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred -HhhccC-------CC---CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 111100 00 00011234578888999999999999999999999998654443
No 96
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.1e-40 Score=340.07 Aligned_cols=236 Identities=22% Similarity=0.285 Sum_probs=185.9
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
..++||+|+||+||+|+.. +|+.||||++..... ....++..|+..+.++ +||||+++++++.+.+..++||||+
T Consensus 61 ~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~- 139 (311)
T 3p1a_A 61 RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC- 139 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-
T ss_pred eeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-
Confidence 3578999999999999976 799999999865332 2334555566655555 8999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+++|.+++.... ..++|..++.|+.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 140 ~~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 140 GPSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLH----SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp CCBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 779999887543 45999999999999999999999 789999999999999999999999999999766543
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...+|.+|+|||++. ..++.++|||||||++|||++|..|+.... .| ... ....
T Consensus 212 ~~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~il~el~~g~~~~~~~~--------------~~-~~~-~~~~---- 268 (311)
T 3p1a_A 212 AGEVQEGDPRYMAPELLQ---GSYGTAADVFSLGLTILEVACNMELPHGGE--------------GW-QQL-RQGY---- 268 (311)
T ss_dssp ---CCCCCGGGCCGGGGG---TCCSTHHHHHHHHHHHHHHHHTCCCCSSHH--------------HH-HHH-TTTC----
T ss_pred CCcccCCCccccCHhHhc---CCCCchhhHHHHHHHHHHHHhCCCCCCCcc--------------HH-HHH-hccC----
Confidence 445789999999764 368999999999999999999977764210 11 111 1111
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..+... ......+.+++.+||+.||++|||+.|+++
T Consensus 269 ~~~~~~-----~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 269 LPPEFT-----AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp CCHHHH-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCcccc-----cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 111110 112345788899999999999999999985
No 97
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=334.15 Aligned_cols=244 Identities=25% Similarity=0.323 Sum_probs=198.0
Q ss_pred cccCcCCeEEEEEEEEc---CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 366 EMLGKGGFGTAYKAVLD---DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.||+|+||.||+|... ++..||||+++... ....+++.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 47999999999999853 57889999998643 33567899999999999999999999999 556789999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++.... ..+++..++.++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 ~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 95 PLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLE----EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp EHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred CHHHHHHhCC----ccCCHHHHHHHHHHHHHHHHHHH----HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 9999997443 45899999999999999999999 789999999999999999999999999999766432
Q ss_pred -----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
...++..|+|||++. +..++.++||||||+++|||+| |+.||.... ..+....+.....
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------------~~~~~~~i~~~~~- 231 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECIN--FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK------------GPEVMAFIEQGKR- 231 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHH--HCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC------------THHHHHHHHTTCC-
T ss_pred eeccccccccccccCHHHhc--cCCCCchhhHHHHHHHHHHHHcCCCCCcccCC------------HHHHHHHHhcCCc-
Confidence 233467899999764 4578899999999999999999 999996432 1222222222110
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.. .. ......+.+++.+||+.||++||++.|+++.|+++..
T Consensus 232 ~~-------~~---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 272 (287)
T 1u59_A 232 ME-------CP---PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272 (287)
T ss_dssp CC-------CC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC-------CC---CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 00 01 1223467888899999999999999999999999864
No 98
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-40 Score=347.23 Aligned_cols=253 Identities=22% Similarity=0.300 Sum_probs=198.3
Q ss_pred HhcccCcCCeEEEEEEEE------cCCcEEEEEEcccCC-cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVL------DDGSVVAVKRLKDAS-IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 435 (672)
..+.||+|+||.||+|.. .++..||||+++... ....+.+.+|++++.++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 457899999999999995 245689999997542 23457899999999999 8999999999999999999999
Q ss_pred eecCCCChhHHhhcCCCC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEE
Q 005880 436 EYMPNGSLFWLLHGNRGP------------------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVL 497 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIl 497 (672)
||+++|+|.+++...... ....+++..++.++.|+++||+||| +.+|+||||||+||+
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl 204 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE----FKSCVHRDLAARNVL 204 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH----HTTEEETTCSGGGEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChhhEE
Confidence 999999999999865321 1134899999999999999999999 789999999999999
Q ss_pred eCCCCcEEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCC
Q 005880 498 LDKTGNARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGA 569 (672)
Q Consensus 498 l~~~~~~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~ 569 (672)
++.++.+||+|||++...... ...+|..|+|||++. +..++.++|||||||++|||+| |+.||......
T Consensus 205 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~- 281 (344)
T 1rjb_A 205 VTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF--EGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD- 281 (344)
T ss_dssp EETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-
T ss_pred EcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhc--cCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH-
Confidence 999999999999999765432 223466799999765 4578999999999999999998 99999654211
Q ss_pred CCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 570 GMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
..+........... .. ......+.+++.+||+.||.+|||+.|+++.|+.+...
T Consensus 282 -----------~~~~~~~~~~~~~~-------~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 282 -----------ANFYKLIQNGFKMD-------QP---FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp -----------HHHHHHHHTTCCCC-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -----------HHHHHHHhcCCCCC-------CC---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 12222222221110 00 11234577888899999999999999999999998653
No 99
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.5e-39 Score=330.06 Aligned_cols=241 Identities=21% Similarity=0.288 Sum_probs=197.0
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
..+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (277)
T 3f3z_A 13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGE 92 (277)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCc
Confidence 3578999999999999965 478999999987665677889999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe---CCCCcEEEeccCCCccCCCC-
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~~~- 518 (672)
|.+++... ..+++..++.++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||++......
T Consensus 93 L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 93 LFERVVHK-----RVFRESDAARIMKDVLSAVAYCH----KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp HHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99998754 34899999999999999999999 7899999999999999 78899999999999765543
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...+|..|+|||++. ..++.++||||||+++|||++|+.||.... ..+........... .
T Consensus 164 ~~~~~~~t~~y~aPE~~~---~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------------~~~~~~~~~~~~~~--~ 226 (277)
T 3f3z_A 164 MMRTKVGTPYYVSPQVLE---GLYGPECDEWSAGVMMYVLLCGYPPFSAPT------------DSEVMLKIREGTFT--F 226 (277)
T ss_dssp CBCCCCSCTTTCCHHHHT---TCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------------HHHHHHHHHHCCCC--C
T ss_pred chhccCCCCCccChHHhc---ccCCchhhehhHHHHHHHHHHCCCCCCCCC------------HHHHHHHHHhCCCC--C
Confidence 456788999999764 348999999999999999999999996432 22222222222110 0
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... ......+.+++.+||+.||++|||+.|+++
T Consensus 227 ~~~~~------~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 227 PEKDW------LNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp CHHHH------TTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred Cchhh------hcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000 012345778889999999999999999985
No 100
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3.3e-40 Score=367.56 Aligned_cols=247 Identities=28% Similarity=0.411 Sum_probs=201.6
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
+.+.||+|+||.||+|.+.++..||||+++.... ..++|.+|+++|++++||||+++++++.+ +..++||||+++|+|
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL 348 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 348 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEH
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcH
Confidence 4578999999999999998888999999986543 46789999999999999999999999865 678999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.++++... ...+++.+++.|+.|+++||+||| +.+|+||||||+|||+++++.+||+|||+++.....
T Consensus 349 ~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 421 (535)
T 2h8h_A 349 LDFLKGET---GKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421 (535)
T ss_dssp HHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTT
T ss_pred HHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecc
Confidence 99997432 134899999999999999999999 789999999999999999999999999999876532
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++. ...++.++|||||||++|||+| |+.||... ...+....+......
T Consensus 422 ~~~~~~~~y~aPE~~~--~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~------------~~~~~~~~i~~~~~~---- 483 (535)
T 2h8h_A 422 QGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVERGYRM---- 483 (535)
T ss_dssp CSTTSCGGGSCHHHHH--HCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC------------CHHHHHHHHHTTCCC----
T ss_pred cCCcCcccccCHHHhc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------------CHHHHHHHHHcCCCC----
Confidence 334567899999765 4578999999999999999999 99999643 222222222221100
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
.........+.+++.+||+.||++|||+.+|++.|+.+...
T Consensus 484 -------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 484 -------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 00112234578889999999999999999999999987643
No 101
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-39 Score=333.13 Aligned_cols=244 Identities=23% Similarity=0.318 Sum_probs=191.3
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.+.||+|+||.||+|... +|..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 105 (285)
T 3is5_A 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGG 105 (285)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred ecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCC
Confidence 3578999999999999964 68999999987543 235678999999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe---CCCCcEEEeccCCCccCCCC
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~~~ 518 (672)
+|.+++..... ....+++..++.++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||++......
T Consensus 106 ~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (285)
T 3is5_A 106 ELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFH----SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180 (285)
T ss_dssp BHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----
T ss_pred cHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHH----hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc
Confidence 99998864321 1245899999999999999999999 7899999999999999 45678999999999765433
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...++..|+|||++. ..++.++||||||+++|||++|+.||... ...+............
T Consensus 181 ~~~~~~~~t~~y~aPE~~~---~~~~~~~Di~slG~il~~ll~g~~pf~~~------------~~~~~~~~~~~~~~~~- 244 (285)
T 3is5_A 181 EHSTNAAGTALYMAPEVFK---RDVTFKCDIWSAGVVMYFLLTGCLPFTGT------------SLEEVQQKATYKEPNY- 244 (285)
T ss_dssp ------CTTGGGCCHHHHT---TCCCHHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHCCCCC-
T ss_pred ccCcCcccccCcCChHHhc---cCCCcccCeehHHHHHHHHHhCCCCCCCC------------CHHHHHhhhccCCccc-
Confidence 456788999999763 46889999999999999999999999643 2222222211111100
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
... ... ....+.+++.+||+.||++|||+.|+++
T Consensus 245 --~~~---~~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 245 --AVE---CRP---LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp --CC-----CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred --ccc---cCc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 000 1235678888999999999999999974
No 102
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=350.15 Aligned_cols=266 Identities=19% Similarity=0.253 Sum_probs=207.3
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCC--eEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFARE--EKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++...+ ..++||||+++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~ 93 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCC
Confidence 478999999999999965 589999999975432 34577889999999999999999999998765 67999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe----CCCCcEEEeccCCCccCC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL----DKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll----~~~~~~kl~DfG~a~~~~ 516 (672)
|+|.+++..... ...+++..++.++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||+++...
T Consensus 94 g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 94 GSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLR----ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp EEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHH----HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 999999975431 234899999999999999999999 7899999999999999 778889999999998765
Q ss_pred CC----CCCCCCcccCCCccccC------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 517 PS----TVPRSNGYRAPELSSSD------GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 517 ~~----~~~~t~~y~aPE~l~~~------~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
.. ...+|..|+|||++... ...++.++|||||||++|||++|+.||...... ....+.+...
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~--------~~~~~~~~~~ 239 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP--------RRNKEVMYKI 239 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT--------TTCHHHHHHH
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc--------cchHHHHHHH
Confidence 43 45678999999976421 145678999999999999999999999754321 1223333333
Q ss_pred Hhhhccccc------------cchhhc-cccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 587 VREEWTAEV------------FDLELM-RYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 587 ~~~~~~~~~------------~d~~~~-~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
......... ...... ...........+.+++.+||+.||++||++.|+++.++++...
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 332211100 000000 0111245566788999999999999999999999999998754
No 103
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5.8e-40 Score=354.81 Aligned_cols=245 Identities=20% Similarity=0.271 Sum_probs=195.5
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.++||+|+||.||+|+.. +++.||||++++.... ....+.+|..++..++||||+++++++.+++..++||||+++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~g 158 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCC
Confidence 478999999999999976 4789999999753221 233488999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 159 g~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH----~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 159 GDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVH----QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp CBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHH----hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 99999998632 35999999999999999999999 789999999999999999999999999999765432
Q ss_pred ----CCCCCCcccCCCcccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 519 ----TVPRSNGYRAPELSSS---DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~---~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
...||+.|+|||++.. ....++.++|||||||++|||++|+.||... +..+....+.....
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~------------~~~~~~~~i~~~~~ 298 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE------------SLVETYGKIMNHKE 298 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS------------SHHHHHHHHHTHHH
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC------------ChhHHHHhhhhccc
Confidence 3578999999998752 2456899999999999999999999999743 22333333332211
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQ--RPNMSHVVK 636 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~ 636 (672)
.... ..........+.+++.+||..+|++ ||++.|+++
T Consensus 299 ~~~~-------p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 299 RFQF-------PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HCCC-------CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred cccC-------CcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1000 0000112234677888999888888 999999876
No 104
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-39 Score=340.53 Aligned_cols=247 Identities=24% Similarity=0.404 Sum_probs=195.3
Q ss_pred hcccCcCCeEEEEEEEEcC-----CcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLDD-----GSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.+.||+|+||.||+|.... +..||||+++.... .....+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 4789999999999998653 24699999975432 34567899999999999999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 129 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 129 ENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLA----NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp TTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred CCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 9999999997643 35899999999999999999999 789999999999999999999999999999766432
Q ss_pred --------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 519 --------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 --------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
...++..|+|||++. +..++.++|||||||++|||++ |+.||... ...+....+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~ellt~g~~pf~~~------------~~~~~~~~~~~~ 266 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAIS--YRKFTSASDVWSFGIVMWEVMTYGERPYWEL------------SNHEVMKAINDG 266 (333)
T ss_dssp ----------CCCGGGSCHHHHH--SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------------CHHHHHHHHHTT
T ss_pred cccccccCCCCccccccCchhcc--cCCCCchhhhHHHHHHHHHHHcCCCCCcccC------------CHHHHHHHHHCC
Confidence 123456799999764 5678999999999999999999 99999632 122222222211
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
... +........+.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 267 ~~~-----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 267 FRL-----------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp CCC-----------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CcC-----------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 100 00011234578888999999999999999999999998753
No 105
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=6.3e-40 Score=349.96 Aligned_cols=241 Identities=22% Similarity=0.357 Sum_probs=189.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|+.. +++.||||++++.... ..+.+.+|..++.++ +||||+++++++.+.+..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 478999999999999965 5889999999754322 234578899998877 89999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
+|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++++||+|||+++....
T Consensus 137 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH----~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 207 (396)
T 4dc2_A 137 GGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 207 (396)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCEEeccCCHHHEEECCCCCEEEeecceeeecccCC
Confidence 99999999754 34999999999999999999999 78999999999999999999999999999975322
Q ss_pred ---CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 518 ---STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 518 ---~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
....||+.|+|||++. +..++.++|||||||++|||++|+.||......+.. .......+........
T Consensus 208 ~~~~~~~gt~~Y~aPE~l~--~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~----~~~~~~~~~~~i~~~~--- 278 (396)
T 4dc2_A 208 DTTSTFCGTPNYIAPEILR--GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP----DQNTEDYLFQVILEKQ--- 278 (396)
T ss_dssp CCBCCCCBCGGGCCHHHHT--TCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC----------CCHHHHHHHHHHCC---
T ss_pred CccccccCCcccCCchhhc--CCCCChHHHHHHHHHHHHHHHhCCCCCccccccccc----chhhHHHHHHHHhccc---
Confidence 2566899999999775 467899999999999999999999999754322100 0111122222211111
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM 631 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 631 (672)
...... ....+.+++.+||+.||++||++
T Consensus 279 -----~~~p~~---~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 279 -----IRIPRS---LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -----CCCCTT---SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -----cCCCCc---CCHHHHHHHHHHhcCCHhHcCCC
Confidence 011111 22356788889999999999996
No 106
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=8.6e-40 Score=333.84 Aligned_cols=245 Identities=30% Similarity=0.444 Sum_probs=199.4
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
.+.||+|+||.||+|...++..||||+++.... ..+.+.+|++++++++||||+++++++. .+..++||||+++++|.
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 478999999999999998888999999976543 4678999999999999999999999976 55689999999999999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC------
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS------ 518 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~------ 518 (672)
+++.... ...+++..++.++.|+++||+||| +.+|+||||||+||++++++.+||+|||++......
T Consensus 96 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 168 (279)
T 1qpc_A 96 DFLKTPS---GIKLTINKLLDMAAQIAEGMAFIE----ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (279)
T ss_dssp HHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccccc
Confidence 9996432 125899999999999999999999 789999999999999999999999999999866543
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||++. +..++.++||||||+++|||++ |+.||... ...+......... ..
T Consensus 169 ~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~el~~~g~~p~~~~------------~~~~~~~~~~~~~-~~---- 229 (279)
T 1qpc_A 169 GAKFPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM------------TNPEVIQNLERGY-RM---- 229 (279)
T ss_dssp TCCCCTTTSCHHHHH--HCEECHHHHHHHHHHHHHHHHTTTCCSSTTC------------CHHHHHHHHHTTC-CC----
T ss_pred CCCCccCccChhhhc--cCCCCchhhhHHHHHHHHHHHhCCCCCCccc------------CHHHHHHHHhccc-CC----
Confidence 234567899999764 4578899999999999999999 99998642 2222222222111 00
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.... .....+.+++.+||+.||++|||+.++++.|+++..
T Consensus 230 ---~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 230 ---VRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp ---CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCcc---cccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 0011 122457888889999999999999999999999864
No 107
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.1e-39 Score=345.60 Aligned_cols=243 Identities=21% Similarity=0.294 Sum_probs=186.5
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||.||+++.. +|+.||||++..... ..+.+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 478999999999999965 789999999975433 346788999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc--EEEeccCCCccCCC----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN--ARVSDFGLSIFAPP---- 517 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~--~kl~DfG~a~~~~~---- 517 (672)
.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++. +||+|||+++....
T Consensus 104 ~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH----~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~ 174 (361)
T 3uc3_A 104 YERICNA-----GRFSEDEARFFFQQLLSGVSYCH----SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 174 (361)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCC
Confidence 9999754 24899999999999999999999 789999999999999987765 99999999974332
Q ss_pred CCCCCCCcccCCCccccCCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 518 STVPRSNGYRAPELSSSDGRKQS-QKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 518 ~~~~~t~~y~aPE~l~~~~~~~~-~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
....+|..|+|||++.. ..++ .++|||||||++|||++|+.||...... ......+.........
T Consensus 175 ~~~~gt~~y~aPE~~~~--~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~~~~~~~~~~~~---- 240 (361)
T 3uc3_A 175 KSTVGTPAYIAPEVLLR--QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP--------RDYRKTIQRILSVKYS---- 240 (361)
T ss_dssp ------CTTSCHHHHHC--SSCCHHHHHHHHHHHHHHHHHHSSCSCC----C--------CCHHHHHHHHHTTCCC----
T ss_pred CCCcCCCCcCChhhhcC--CCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH--------HHHHHHHHHHhcCCCC----
Confidence 24568899999998753 3444 4599999999999999999999754321 2233333332222110
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
...... ....+.+++.+||+.||++|||+.|+++.
T Consensus 241 ---~~~~~~---~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 241 ---IPDDIR---ISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---CCTTSC---CCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---CCCcCC---CCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 000001 12356788889999999999999999863
No 108
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-39 Score=354.04 Aligned_cols=238 Identities=26% Similarity=0.387 Sum_probs=196.3
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +|+.||||+++.... .....+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 100 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 478999999999999965 799999999975322 2356789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 101 g~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 101 GELFDYICKN-----GRLDEKESRRLFQQILSGVDYCH----RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp EEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCCCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 9999999743 35999999999999999999999 889999999999999999999999999999876543
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...+|+.|+|||++.. ....+.++|||||||++|||++|+.||... +.......+.....
T Consensus 172 ~~~~~gt~~y~aPE~~~~-~~~~~~~~DiwSlGvil~elltG~~Pf~~~------------~~~~~~~~i~~~~~----- 233 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISG-RLYAGPEVDIWSSGVILYALLCGTLPFDDD------------HVPTLFKKICDGIF----- 233 (476)
T ss_dssp BCCCCSCSTTCCHHHHTT-CCBCSHHHHHHHHHHHHHHHHHSSCSSCCS------------SSHHHHHHHHTTCC-----
T ss_pred ccccCCCcCeEChhhccC-CCCCCCcceehhhHHHHHHHhhCCCCCCCC------------CHHHHHHHHhcCCc-----
Confidence 4568899999998753 233478999999999999999999999643 22233333322211
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... ....+.+++.+||+.||++|||+.|+++
T Consensus 234 ----~~p~~---~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 234 ----YTPQY---LNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ----CCCTT---CCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----CCCcc---CCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 00111 1235778888999999999999999986
No 109
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-39 Score=343.57 Aligned_cols=249 Identities=20% Similarity=0.224 Sum_probs=193.8
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccC-----CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA-----SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
..+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 30 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeC
Confidence 3578999999999999964 6889999998643 233567899999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCC-----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhhCC
Q 005880 438 MPNGSLFWLLHGNRGP-----------------------------------GRTPLDWTTRLKIAAGAARGLAFIHFTCK 482 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~ 482 (672)
+++|+|.+++...... ....+++..++.++.|+++||+|||
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---- 185 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---- 185 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH----
Confidence 9999999998521100 0122467788999999999999999
Q ss_pred CCCcEecCCCCCCEEeCCCC--cEEEeccCCCccCCC---------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHH
Q 005880 483 SLKLTHGNIKSTNVLLDKTG--NARVSDFGLSIFAPP---------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVL 551 (672)
Q Consensus 483 ~~~iiH~Dlkp~NIll~~~~--~~kl~DfG~a~~~~~---------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvv 551 (672)
+.+|+||||||+||+++.++ .+||+|||+++.... ....+|..|+|||++......++.++|||||||+
T Consensus 186 ~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i 265 (345)
T 3hko_A 186 NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265 (345)
T ss_dssp HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence 78999999999999998776 899999999975422 2456788999999876555788999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH
Q 005880 552 LLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM 631 (672)
Q Consensus 552 l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 631 (672)
+|||++|+.||... ...+............. .+. .......+.+++.+||+.||.+|||+
T Consensus 266 l~el~~g~~pf~~~------------~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~li~~~l~~~p~~Rps~ 325 (345)
T 3hko_A 266 LHLLLMGAVPFPGV------------NDADTISQVLNKKLCFE--NPN------YNVLSPLARDLLSNLLNRNVDERFDA 325 (345)
T ss_dssp HHHHHHSSCSSCCS------------SHHHHHHHHHHCCCCTT--SGG------GGGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred HHHHHHCCCCCCCC------------ChHHHHHHHHhcccccC--Ccc------cccCCHHHHHHHHHHcCCChhHCCCH
Confidence 99999999999643 22223333332221100 000 01123457788889999999999999
Q ss_pred HHHHH
Q 005880 632 SHVVK 636 (672)
Q Consensus 632 ~evl~ 636 (672)
.|+++
T Consensus 326 ~~~l~ 330 (345)
T 3hko_A 326 MRALQ 330 (345)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99986
No 110
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=343.40 Aligned_cols=240 Identities=23% Similarity=0.322 Sum_probs=180.3
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++.+++||||+++++++.+.+..++||||+++|+|
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 135 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL 135 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCH
Confidence 468999999999999976 58899999997543 456788999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC---CCcEEEeccCCCccCCCC--
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK---TGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~---~~~~kl~DfG~a~~~~~~-- 518 (672)
.+++... ..+++.++..++.|+++||+||| +.+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 136 ~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 206 (349)
T 2w4o_A 136 FDRIVEK-----GYYSERDAADAVKQILEAVAYLH----ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL 206 (349)
T ss_dssp HHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence 9999754 35899999999999999999999 789999999999999975 889999999999866543
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||..... .......+...... ..
T Consensus 207 ~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----------~~~~~~~i~~~~~~--~~ 271 (349)
T 2w4o_A 207 MKTVCGTPGYCAPEILR--GCAYGPEVDMWSVGIITYILLCGFEPFYDERG-----------DQFMFRRILNCEYY--FI 271 (349)
T ss_dssp ------CGGGSCHHHHT--TCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC-----------HHHHHHHHHTTCCC--CC
T ss_pred cccccCCCCccCHHHhc--CCCCCcccchHHHHHHHHHHHhCCCCCCCCcc-----------cHHHHHHHHhCCCc--cC
Confidence 456789999999764 55789999999999999999999999964321 11112222221110 00
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.+ ........+.+++.+||+.||++|||+.|+++
T Consensus 272 ~~------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 272 SP------WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TT------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred Cc------hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 00112345778888999999999999999975
No 111
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.2e-39 Score=338.77 Aligned_cols=237 Identities=22% Similarity=0.328 Sum_probs=185.7
Q ss_pred hcccCcCCeEEEEEEEE----cCCcEEEEEEcccCCc----chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASI----GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
.+.||+|+||.||+|+. .+|+.||+|+++.... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 101 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILE 101 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEe
Confidence 47899999999999996 4789999999976432 234567899999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 102 YLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLH----QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp CCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred CCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHH----hCCEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 99999999999754 34899999999999999999999 7899999999999999999999999999987543
Q ss_pred C-----CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 517 P-----STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 517 ~-----~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
. ....+|..|+|||++. +..++.++|||||||++|||++|+.||... +.......+.....
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~------------~~~~~~~~i~~~~~ 238 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILM--RSGHNRAVDWWSLGALMYDMLTGAPPFTGE------------NRKKTIDKILKCKL 238 (327)
T ss_dssp ------CTTSSCCTTSCHHHHT--TSCCCTHHHHHHHHHHHHHHHHSSCSCCCS------------SHHHHHHHHHHTCC
T ss_pred cCCccccccCCCcCccCHhhCc--CCCCCCcccchhHHHHHHHHHHCCCCCCCC------------CHHHHHHHHHhCCC
Confidence 2 2456889999999764 457899999999999999999999999643 22223333322211
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVK 636 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 636 (672)
..... ....+.+++.+||+.||++|| ++.|+++
T Consensus 239 ---------~~p~~---~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 ---------NLPPY---LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ---------CCCTT---SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ---------CCCCC---CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 00111 123577888899999999999 6677765
No 112
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=9e-40 Score=337.65 Aligned_cols=258 Identities=26% Similarity=0.312 Sum_probs=195.8
Q ss_pred hcccCcCCeEEEEEEEE-----cCCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVL-----DDGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 436 (672)
.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|++++++++||||+++++++.+. ...++|||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 105 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEE
Confidence 47899999999999984 368999999997433 23457899999999999999999999999876 66899999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|+++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 106 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 106 FLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLG----SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp CCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred eCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhh----cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 999999999996543 35899999999999999999999 7899999999999999999999999999997665
Q ss_pred CC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCC--CCCCCCCCChhHHHHHH
Q 005880 517 PS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGA--GMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 517 ~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~--~~~~~~~~~~~~~~~~~ 586 (672)
.. ...+|..|+|||++. +..++.++||||||+++|||+||+.|+....... .............+...
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLM--QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHH--HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeec--CCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence 42 345677799999764 4578899999999999999999999864210000 00000000000011111
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
..... ...........+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 256 ~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 256 LKEGK----------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHTTC----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccC----------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11110 00001122346788899999999999999999999999875
No 113
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=7.4e-40 Score=335.88 Aligned_cols=247 Identities=26% Similarity=0.392 Sum_probs=201.9
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
..+.||+|+||.||+|... ++..||+|+++.... ..+.+.+|++++++++||||+++++++.+++..++||||+++|+
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 95 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 95 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST-HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEE
T ss_pred EEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCc
Confidence 3478999999999999976 488999999975443 56789999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ...+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 96 L~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 168 (288)
T 3kfa_A 96 LLDYLRECN---RQEVSAVVLLYMATQISSAMEYLE----KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168 (288)
T ss_dssp HHHHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHH----HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEE
T ss_pred HHHHHHhcc---cCCccHhHHHHHHHHHHHHHHHHH----HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcccc
Confidence 999997643 246899999999999999999999 779999999999999999999999999999876543
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++||||||+++|||++ |+.||.... ........... ...
T Consensus 169 ~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~------------~~~~~~~~~~~-~~~-- 231 (288)
T 3kfa_A 169 HAGAKFPIKWTAPESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGID------------LSQVYELLEKD-YRM-- 231 (288)
T ss_dssp ETTEEECGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------------GGGHHHHHHTT-CCC--
T ss_pred ccCCccccCcCChhhhc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------------HHHHHHHHhcc-CCC--
Confidence 223456799999764 4578999999999999999999 999986432 11222221111 100
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
... ......+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 232 -----~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 232 -----ERP---EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp -----CCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----CCC---CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 001 1123457888889999999999999999999998754
No 114
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.6e-40 Score=344.01 Aligned_cols=263 Identities=27% Similarity=0.409 Sum_probs=200.0
Q ss_pred hcccCcCCeEEEEEEEE-----cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEc--CCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVL-----DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA--REEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 107 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 107 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEEC
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEee
Confidence 47899999999999984 3688999999987766667789999999999999999999999874 4568899999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 108 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 108 LPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLG----SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp CTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred cCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 99999999997543 35899999999999999999999 78999999999999999999999999999986643
Q ss_pred C--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCC--CCCCCCCChhHHHHHHH
Q 005880 518 S--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAG--MGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 518 ~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~ 587 (672)
. ...++..|+|||++. +..++.++||||||+++|||++|+.||........ ............+....
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLS--DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHH--HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred CCccceeeccCCccccccCHHHhc--cCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 2 334567799999764 45788999999999999999999999853211000 00000000001111111
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVS 647 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 647 (672)
.... ...........+.+++.+||+.||++|||+.|+++.|+.+......
T Consensus 258 ~~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 307 (327)
T 3lxl_A 258 EEGQ----------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307 (327)
T ss_dssp HTTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred hccc----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence 1110 0011112334678889999999999999999999999998754433
No 115
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4.5e-40 Score=343.80 Aligned_cols=245 Identities=26% Similarity=0.365 Sum_probs=193.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcE----EEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSV----VAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.+.||+|+||.||+|+.. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++. ++..++||||+
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 96 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYL 96 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeC
Confidence 478999999999999954 4443 8888875432 223456788999999999999999999885 56788999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 97 PLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLE----EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp TTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHH----HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred CCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHH----hCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 9999999997543 35899999999999999999999 789999999999999999999999999999876433
Q ss_pred -------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 519 -------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 519 -------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
...++.+|+|||++. +..++.++|||||||++|||+| |+.||...... +.........
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------------~~~~~~~~~~ 234 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIH--FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA------------EVPDLLEKGE 234 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT------------HHHHHHHTTC
T ss_pred cccccccCCCCcccccChHHhc--cCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH------------HHHHHHHcCC
Confidence 234567899999764 4578999999999999999999 99999753211 1111111111
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
. . ..+ ......+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 235 ~-~--~~~--------~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 235 R-L--AQP--------QICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp B-C--CCC--------TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred C-C--CCC--------CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0 0 000 0112246778889999999999999999999999854
No 116
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.2e-39 Score=338.92 Aligned_cols=258 Identities=25% Similarity=0.388 Sum_probs=200.7
Q ss_pred hcccCcCCeEEEEEEEEc-CCcE--EEEEEcccCC-cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSV--VAVKRLKDAS-IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~--vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|+.. +|.. ||||+++... ....+.+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 578999999999999954 5664 4999987532 23456789999999999 89999999999999999999999999
Q ss_pred CCChhHHhhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEec
Q 005880 440 NGSLFWLLHGNRG-----------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSD 508 (672)
Q Consensus 440 ~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 508 (672)
+|+|.+++..... .....+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIl~~~~~~~kL~D 185 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS----QKQFIHRDLAARNILVGENYVAKIAD 185 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECGGGCEEECC
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCccceEEEcCCCeEEEcc
Confidence 9999999976530 12246899999999999999999999 78999999999999999999999999
Q ss_pred cCCCccCCC----CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHH
Q 005880 509 FGLSIFAPP----STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWV 583 (672)
Q Consensus 509 fG~a~~~~~----~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~ 583 (672)
||+++.... ....++..|+|||++. +..++.++|||||||++|||+| |+.||... ...+..
T Consensus 186 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~ellt~g~~pf~~~------------~~~~~~ 251 (327)
T 1fvr_A 186 FGLSRGQEVYVKKTMGRLPVRWMAIESLN--YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM------------TCAELY 251 (327)
T ss_dssp TTCEESSCEECCC----CCTTTCCHHHHH--HCEECHHHHHHHHHHHHHHHHTTSCCTTTTC------------CHHHHH
T ss_pred cCcCccccccccccCCCCCccccChhhhc--cccCCchhcchHHHHHHHHHHcCCCCCCCCC------------cHHHHH
Confidence 999874432 2334577899999764 4578899999999999999998 99999643 222222
Q ss_pred HHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC
Q 005880 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPCHE 651 (672)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~~ 651 (672)
.... ..... ... ......+.+++.+||+.||++|||+.|+++.|+++..........
T Consensus 252 ~~~~-~~~~~-------~~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~ 308 (327)
T 1fvr_A 252 EKLP-QGYRL-------EKP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNT 308 (327)
T ss_dssp HHGG-GTCCC-------CCC---TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSBCC
T ss_pred HHhh-cCCCC-------CCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCcccc
Confidence 2211 11000 001 112245778888999999999999999999999998765554433
No 117
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.5e-40 Score=346.20 Aligned_cols=257 Identities=26% Similarity=0.330 Sum_probs=197.9
Q ss_pred hcccCcCCeEEEEEEEEc-----CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC--CeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVLD-----DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--EEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 436 (672)
.+.||+|+||.||++.+. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+. ...++|||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 115 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEEC
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEe
Confidence 478999999999998743 58899999998643 23467799999999999999999999999874 57889999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|+++|+|.+++... .+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 116 ~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 116 YVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLH----AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp CCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred cccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 99999999999754 3899999999999999999999 7899999999999999999999999999998765
Q ss_pred CC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCh--hHHHHHH
Q 005880 517 PS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDL--PRWVQSV 586 (672)
Q Consensus 517 ~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~--~~~~~~~ 586 (672)
.. ...++..|+|||++. +..++.++||||||+++|||+||+.||................. ...+...
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLK--EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHH--HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhc--CCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence 43 334567799999764 45788999999999999999999999853210000000000000 0000011
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.... . ...........+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 264 ~~~~---------~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 264 LERG---------E-RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HHTT---------C-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Hhcc---------c-CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 1110 0 001112233468889999999999999999999999999864
No 118
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.1e-39 Score=369.40 Aligned_cols=242 Identities=26% Similarity=0.294 Sum_probs=195.2
Q ss_pred cccCcCCeEEEEEEEEc---CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD---DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|.+. .++.||||+++.... ...+++.+|++++.+++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999753 467899999975432 246789999999999999999999999864 568899999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... ..+++..++.|+.||++||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 454 g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH----~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 454 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE----ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred CCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHH----HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 9999999754 35899999999999999999999 789999999999999999999999999999766432
Q ss_pred ------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 519 ------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 519 ------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
...++..|+|||++. +..++.++|||||||++|||++ |+.||.... ..+....+.....
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~--~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~------------~~~~~~~i~~~~~ 590 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECIN--YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK------------GSEVTAMLEKGER 590 (635)
T ss_dssp ----------CGGGSCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC------------HHHHHHHHHTTCC
T ss_pred ccccccCCCCceeeeChhhhc--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC------------HHHHHHHHHcCCC
Confidence 223456799999774 5578999999999999999998 999996432 2222222222111
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
.. .......++.+++..||+.||++|||+.+|++.|+++.
T Consensus 591 -~~----------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 591 -MG----------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp -CC----------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -CC----------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 00 01122346788899999999999999999999999875
No 119
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=5.7e-39 Score=330.56 Aligned_cols=262 Identities=19% Similarity=0.208 Sum_probs=201.7
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEE-EcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYY-FAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|+. .+|+.||||++.... ..+++.+|++++..++|++++..+.++ ...+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 47899999999999995 579999999986543 234688999999999988877766655 5567789999999 999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC---CCCcEEEeccCCCccCCCC-
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD---KTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~---~~~~~kl~DfG~a~~~~~~- 518 (672)
|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++ .++.+||+|||+++.....
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (296)
T 3uzp_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIH----SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence 999997543 35999999999999999999999 78999999999999994 7889999999999765432
Q ss_pred -----------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 519 -----------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 519 -----------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||....... ..... ....
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~---~~~~ 231 (296)
T 3uzp_A 163 THQHIPYRENKNLTGTARYASINTHL--GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT------KRQKY---ERIS 231 (296)
T ss_dssp TCCBCCCCCSCCCCSCTTTCCHHHHT--TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS------SSSHH---HHHH
T ss_pred cccccccccccccccccccCChhhhc--CCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchh------hhhhh---hhhc
Confidence 345788999999764 5578999999999999999999999997643221 11111 1111
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCC
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPCHENFDS 655 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~~~~~~ 655 (672)
....... . +.. .. .....+.+++.+||+.||++|||+.||++.|+++......+....+++
T Consensus 232 ~~~~~~~-~-~~~--~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw 292 (296)
T 3uzp_A 232 EKKMSTP-I-EVL--CK---GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 292 (296)
T ss_dssp HHHHHSC-H-HHH--TT---TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGG
T ss_pred ccccCCc-h-HHH--Hh---hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcccccccc
Confidence 1110000 0 000 01 112457888899999999999999999999999986655554444444
No 120
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.5e-39 Score=335.77 Aligned_cols=254 Identities=23% Similarity=0.378 Sum_probs=193.5
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|.. .+|+.||||+++... .....++.+|++++++++||||+++++++...+..++||||+++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 116 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 116 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCS
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCC
Confidence 47899999999999996 478999999997532 23456789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++..... ....+++..++.++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 117 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 117 GDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMH----SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp CBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred CCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHh----hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 999999864221 1245899999999999999999999 789999999999999999999999999998765432
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||.... ............... ...
T Consensus 192 ~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----------~~~~~~~~~~~~~~~-~~~ 258 (310)
T 2wqm_A 192 AAHSLVGTPYYMSPERIH--ENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----------MNLYSLCKKIEQCDY-PPL 258 (310)
T ss_dssp -------CCSSCCHHHHT--TCCCCHHHHHHHHHHHHHHHHHSSCTTC-------------CCHHHHHHHHHTTCS-CCC
T ss_pred cccccCCCeeEeChHHhC--CCCCCchhhHHHHHHHHHHHHhCCCCCcccc----------hhHHHHHHHhhcccC-CCC
Confidence 345788999999764 5678999999999999999999999996432 122223222222111 000
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCC
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVE 645 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 645 (672)
. . ......+.+++.+||+.||++|||+.||++.|+++....
T Consensus 259 ~------~---~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 259 P------S---DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp C------T---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred c------c---cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 0 0 112235778888999999999999999999999997543
No 121
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=331.60 Aligned_cols=244 Identities=23% Similarity=0.332 Sum_probs=194.1
Q ss_pred cccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
..||+|+||.||+|.. .+++.||||.++.......+.+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 4799999999999995 468999999998766556788999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-CCcEEEeccCCCccCCC-----C
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK-TGNARVSDFGLSIFAPP-----S 518 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~-~~~~kl~DfG~a~~~~~-----~ 518 (672)
+++.... +...+++..+..++.|+++||+||| +.+|+||||||+||+++. ++.+||+|||++..... .
T Consensus 108 ~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 181 (295)
T 2clq_A 108 ALLRSKW--GPLKDNEQTIGFYTKQILEGLKYLH----DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181 (295)
T ss_dssp HHHHHTT--CCCTTCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred HHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHH----hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence 9998653 2345789999999999999999999 789999999999999987 89999999999976643 2
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...++..|+|||++......++.++||||||+++|||++|+.||..... ......... ... ..+
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----------~~~~~~~~~-~~~-----~~~ 245 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE----------PQAAMFKVG-MFK-----VHP 245 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS----------HHHHHHHHH-HHC-----CCC
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc----------hhHHHHhhc-ccc-----ccc
Confidence 4567889999998754334578999999999999999999999964211 000111100 000 000
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. . ......+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~--~---~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 246 EI--P---ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CC--C---TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cc--c---ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 0 112235778888999999999999999974
No 122
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.1e-39 Score=356.00 Aligned_cols=238 Identities=24% Similarity=0.335 Sum_probs=187.4
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccC---CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA---SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
..+.||+|+||.||+|+.. +|+.||||+++.. .......+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 231 (446)
T 4ejn_A 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence 3578999999999999954 6899999999753 22234567889999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS-LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~- 517 (672)
+|+|.+++... ..+++..+..++.|+++||+||| + .+|+||||||+|||++.++.+||+|||+++....
T Consensus 232 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH----~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 232 GGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLH----SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp SCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH----HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHh----hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999754 35899999999999999999999 5 7999999999999999999999999999976432
Q ss_pred ----CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 518 ----STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 518 ----~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
....||..|+|||++. +..++.++|||||||++|||++|+.||... +.......+......
T Consensus 303 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~g~~Pf~~~------------~~~~~~~~i~~~~~~- 367 (446)
T 4ejn_A 303 GATMKTFCGTPEYLAPEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------------DHEKLFELILMEEIR- 367 (446)
T ss_dssp ----CCSSSCGGGCCHHHHH--TSCCCTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHCCCC-
T ss_pred CcccccccCCccccCHhhcC--CCCCCCccchhhhHHHHHHHhhCCCCCCCC------------CHHHHHHHHHhCCCC-
Confidence 2456899999999764 567899999999999999999999999643 222333333222110
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 636 (672)
.... ....+.+++.+||+.||++|| ++.|+++
T Consensus 368 --------~p~~---~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 368 --------FPRT---LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp --------CCTT---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --------CCcc---CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 0111 123577888899999999999 9999986
No 123
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.9e-39 Score=341.90 Aligned_cols=237 Identities=24% Similarity=0.323 Sum_probs=193.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|+.. +|+.||||+++... ....+.+..|.+++..+ +||||+++++++.+.+..++||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 478999999999999976 47899999997532 22456788999999988 89999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
+|+|.+++.... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 105 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 105 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQ----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 999999997542 4899999999999999999999 78999999999999999999999999999976432
Q ss_pred ---CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 518 ---STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 518 ---~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
....||+.|+|||++. +..++.++|||||||++|||++|+.||... +..+....+......
T Consensus 176 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~G~~Pf~~~------------~~~~~~~~i~~~~~~-- 239 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQAPFEGE------------DEDELFQSIMEHNVA-- 239 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHT--TCCBSTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHCCCC--
T ss_pred cccccccCCccccChhhhc--CCCcCCcccccchHHHHHHHHcCCCCCCCC------------CHHHHHHHHHhCCCC--
Confidence 2556899999999765 457899999999999999999999999643 223333333332110
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM-----SHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~-----~evl~ 636 (672)
.... ...++.+++.+||+.||++||++ .|+++
T Consensus 240 -------~p~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 240 -------YPKS---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp -------CCTT---SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred -------CCCC---CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 0111 22357788889999999999964 66654
No 124
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.2e-39 Score=338.05 Aligned_cols=259 Identities=24% Similarity=0.353 Sum_probs=200.0
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcC--CCCCceeeeEEEEEcCC----eEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGR--LRHPNLVGLKAYYFARE----EKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~lv~e~ 437 (672)
..+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++.. ++||||+++++++.... ..++||||
T Consensus 46 ~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~ 121 (342)
T 1b6c_B 46 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 121 (342)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECC
T ss_pred EEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEee
Confidence 3578999999999999985 899999998643 45677888888876 78999999999998876 78999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh----CCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT----CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~----~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
+++|+|.+++... .+++..++.++.|+++||+|||.. +.+.+|+||||||+||+++.++++||+|||+++
T Consensus 122 ~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~ 195 (342)
T 1b6c_B 122 HEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 195 (342)
T ss_dssp CTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCce
Confidence 9999999999753 389999999999999999999932 114689999999999999999999999999996
Q ss_pred cCCC---------CCCCCCCcccCCCccccCCC----CCCchhHHHHHHHHHHHHHhC----------CCCCCCCCCCCC
Q 005880 514 FAPP---------STVPRSNGYRAPELSSSDGR----KQSQKSDVYSFGVLLLELLTG----------KCPSVIDGGGAG 570 (672)
Q Consensus 514 ~~~~---------~~~~~t~~y~aPE~l~~~~~----~~~~~~DV~S~Gvvl~el~tg----------~~P~~~~~~~~~ 570 (672)
.... ....+|..|+|||++..... .++.++|||||||++|||+|| +.||......
T Consensus 196 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~-- 273 (342)
T 1b6c_B 196 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS-- 273 (342)
T ss_dssp EEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS--
T ss_pred eccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC--
Confidence 5543 23467889999998753211 233789999999999999999 6677543221
Q ss_pred CCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 571 MGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
......+......... .+.........+....+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 274 -----~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 274 -----DPSVEEMRKVVCEQKL-----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp -----SCCHHHHHHHHTTSCC-----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -----cccHHHHHHHHHHHHh-----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 1222333332222211 111111011134566788999999999999999999999999999754
No 125
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-39 Score=331.55 Aligned_cols=247 Identities=25% Similarity=0.340 Sum_probs=195.6
Q ss_pred hcccCcCCeEEEEEEEEc-CC---cEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeE-EEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLD-DG---SVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEK-LLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~lv~e~~ 438 (672)
.+.||+|+||.||+|... ++ ..||+|+++.... ...+.+.+|++++++++||||+++++++.+.+.. ++||||+
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 478999999999999853 23 3799999975433 3457889999999999999999999999876655 9999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
.+|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 106 ~~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 106 CHGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLA----EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp TTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred cCCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999997643 45899999999999999999999 789999999999999999999999999999754331
Q ss_pred ---------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 519 ---------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 ---------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
...++..|+|||.+. +..++.++||||||+++|||++|..|+.... +..+........
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-----------~~~~~~~~~~~~ 244 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQ--TYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-----------DPFDLTHFLAQG 244 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHT--TCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----------CGGGHHHHHHTT
T ss_pred cccccccCcCCCCCccccChhhhc--cCCCChhhchhhHHHHHHHHhhCCCCCCccC-----------CHHHHHHHhhcC
Confidence 344567899999764 5678999999999999999999666654321 111122211111
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
... ... ......+.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 245 ~~~--------~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 245 RRL--------PQP---EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp CCC--------CCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCC--------CCC---ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 100 001 1122357888899999999999999999999999865
No 126
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.1e-38 Score=327.68 Aligned_cols=239 Identities=24% Similarity=0.417 Sum_probs=191.4
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEc----CCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFA----REEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.. ....++||||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 357999999999999964 68899999987543 3345778999999999999999999999875 3457899999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC--cEecCCCCCCEEeC-CCCcEEEeccCCCcc
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK--LTHGNIKSTNVLLD-KTGNARVSDFGLSIF 514 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~--iiH~Dlkp~NIll~-~~~~~kl~DfG~a~~ 514 (672)
+++|+|.+++... ..+++..++.++.|+++||+||| +.+ |+||||||+||+++ +++.+||+|||++..
T Consensus 111 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH----~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 111 MTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH----TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp CCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred cCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHH----cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 9999999999754 34899999999999999999999 667 99999999999998 789999999999976
Q ss_pred CCCC---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 515 APPS---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 515 ~~~~---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
.... ...++..|+|||++. ..++.++||||||+++|||++|+.||.... .............
T Consensus 182 ~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----------~~~~~~~~~~~~~- 246 (290)
T 1t4h_A 182 KRASFAKAVIGTPEFMAPEMYE---EKYDESVDVYAFGMCMLEMATSEYPYSECQ-----------NAAQIYRRVTSGV- 246 (290)
T ss_dssp CCTTSBEESCSSCCCCCGGGGG---TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----------SHHHHHHHHTTTC-
T ss_pred ccccccccccCCcCcCCHHHHh---ccCCCcchHHHHHHHHHHHHhCCCCCCCcC-----------cHHHHHHHHhccC-
Confidence 5544 456789999999764 358999999999999999999999996422 2222222222111
Q ss_pred cccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 TAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....++ ......+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 247 KPASFD---------KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CCGGGG---------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CccccC---------CCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111111 011235788899999999999999999974
No 127
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6e-40 Score=344.21 Aligned_cols=249 Identities=25% Similarity=0.358 Sum_probs=183.9
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCC-CCceeeeEEEEE--------cCCeEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLR-HPNLVGLKAYYF--------AREEKLL 433 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~--------~~~~~~l 433 (672)
..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++.++. ||||+++++++. .....++
T Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~l 111 (337)
T 3ll6_A 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLL 111 (337)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEE
T ss_pred EEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEE
Confidence 3578999999999999964 68999999997666556778999999999996 999999999995 2335789
Q ss_pred EEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC--cEecCCCCCCEEeCCCCcEEEeccCC
Q 005880 434 VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK--LTHGNIKSTNVLLDKTGNARVSDFGL 511 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~--iiH~Dlkp~NIll~~~~~~kl~DfG~ 511 (672)
||||++ |+|.+++..... ..++++.+++.++.|+++||+||| +.+ |+||||||+||+++.++.+||+|||+
T Consensus 112 v~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH----~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 112 LTELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMH----RQKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp EEECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHH----TSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred EEEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH----hCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence 999995 799998865321 245999999999999999999999 677 99999999999999999999999999
Q ss_pred CccCCCC-----------------CCCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 005880 512 SIFAPPS-----------------TVPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGC 573 (672)
Q Consensus 512 a~~~~~~-----------------~~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~ 573 (672)
++..... ...+|..|+|||++.. .+..++.++|||||||++|||++|+.||.......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~---- 260 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR---- 260 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH----
Confidence 9766432 2347888999997632 35678899999999999999999999996432110
Q ss_pred CCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCC
Q 005880 574 GGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVE 645 (672)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 645 (672)
. ....... .. . ......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 261 --------~----~~~~~~~---~~----~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 261 --------I----VNGKYSI---PP----H---DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp -----------------CCC---CT----T---CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred --------h----hcCcccC---Cc----c---cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 0 0010000 00 0 001123677888999999999999999999999997543
No 128
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.8e-39 Score=331.87 Aligned_cols=246 Identities=24% Similarity=0.368 Sum_probs=195.8
Q ss_pred hcccCcCCeEEEEEEEEcC----CcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLDD----GSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|+..+ +..||||.++... ....+.+.+|++++++++||||+++++++.+ +..++||||++
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 95 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYP 95 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCC
Confidence 4789999999999998543 3469999997643 3356789999999999999999999999764 56789999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
+++|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 96 YGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLE----SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp TCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred CCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 999999997543 35899999999999999999999 789999999999999999999999999999766443
Q ss_pred -----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
...++..|+|||++. +..++.++||||||+++|||+| |+.||..... .+...........
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~------------~~~~~~~~~~~~~ 233 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESIN--FRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN------------KDVIGVLEKGDRL 233 (281)
T ss_dssp -----CCCCCGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG------------GGHHHHHHHTCCC
T ss_pred ccccccCCCCcceeCchhhc--cCCCCchhccHHHHHHHHHHHhCCCCCcccCCh------------HHHHHHHhcCCCC
Confidence 334567899999764 4578999999999999999998 9999964321 1111211111100
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcC
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGV 644 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 644 (672)
. .. ......+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 234 -~-------~~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 234 -P-------KP---DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp -C-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -C-------CC---CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 0 00 11223577888899999999999999999999998653
No 129
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.3e-39 Score=329.94 Aligned_cols=237 Identities=24% Similarity=0.353 Sum_probs=174.0
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+ +
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~ 96 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-C
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-C
Confidence 36799999999999995 4689999999975432 23568899999999999999999999999999999999999 7
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++... ..+++..++.++.|+++||+||| +.+|+||||||+||++++++.+||+|||++......
T Consensus 97 ~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 97 NELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCH----RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCCeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 7888888654 34899999999999999999999 789999999999999999999999999999765543
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...+|..|+|||++.. ....+.++||||||+++|||++|+.||... ...............
T Consensus 168 ~~~~~~t~~y~aPE~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~------------~~~~~~~~~~~~~~~---- 230 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISG-KLYAGPEVDVWSCGVILYVMLCRRLPFDDE------------SIPVLFKNISNGVYT---- 230 (275)
T ss_dssp -------CTTCCHHHHCC------THHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHTCCC----
T ss_pred ccCCCCCcCcCCceeeeC-CCCCCcccchHHHHHHHHHHHhCCCCCCCC------------CHHHHHHHHHhCCCC----
Confidence 3457889999997642 223478999999999999999999999643 222222222222110
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
... .....+.+++.+||+.||++|||+.|+++
T Consensus 231 -----~~~---~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 231 -----LPK---FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----CCT---TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----CCc---cCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 001 12235778888999999999999999974
No 130
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.3e-39 Score=335.30 Aligned_cols=251 Identities=24% Similarity=0.330 Sum_probs=190.9
Q ss_pred HhcccCcCCeEEEEEEEEc----CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCe-----EE
Q 005880 364 SAEMLGKGGFGTAYKAVLD----DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREE-----KL 432 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-----~~ 432 (672)
+.+.||+|+||.||+|... ++..||||+++... ....+.+.+|++++++++||||+++++++.+.+. .+
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 4578999999999999854 34589999997543 2345678999999999999999999999987553 49
Q ss_pred EEEeecCCCChhHHhhcCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCC
Q 005880 433 LVSEYMPNGSLFWLLHGNRG-PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL 511 (672)
Q Consensus 433 lv~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~ 511 (672)
+||||+++|+|.+++..... .....+++..++.++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dikp~NIli~~~~~~kl~Dfg~ 193 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS----NRNFLHRDLAARNCMLRDDMTVCVADFGL 193 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH----TTTCCCCCCSGGGEEECTTSCEEECSCSC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCcceEEEcCCCcEEEeecCc
Confidence 99999999999999854321 22356999999999999999999999 88999999999999999999999999999
Q ss_pred CccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHH
Q 005880 512 SIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWV 583 (672)
Q Consensus 512 a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~ 583 (672)
++..... ...++..|+|||++. +..++.++||||||+++|||++ |+.||.... .....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------------~~~~~ 259 (313)
T 3brb_A 194 SKKIYSGDYYRQGRIAKMPVKWIAIESLA--DRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ------------NHEMY 259 (313)
T ss_dssp C----------------CCGGGSCHHHHH--SSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------------GGGHH
T ss_pred ceecccccccCcccccCCCccccCchhhc--CCCccchhhhHHHHHHHHHHHhcCCCCCccCC------------HHHHH
Confidence 9765432 234567899999764 5678999999999999999999 888986432 11222
Q ss_pred HHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
......... .........+.+++.+||+.||++|||+.++++.|+++.+
T Consensus 260 ~~~~~~~~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 260 DYLLHGHRL-----------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp HHHHTTCCC-----------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCC-----------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 222221110 0011223457888899999999999999999999999864
No 131
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=9.1e-40 Score=343.28 Aligned_cols=236 Identities=27% Similarity=0.370 Sum_probs=192.6
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|+.. +|+.||||+++... ....+.+..|.+++..+ +||||+++++++.+.+..++||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999965 68999999997532 22456678899998876 89999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
+|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++++||+|||+++....
T Consensus 102 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 172 (345)
T 1xjd_A 102 GGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLH----SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 172 (345)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC
Confidence 99999999754 24899999999999999999999 78999999999999999999999999999976432
Q ss_pred ---CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 518 ---STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 518 ---~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
....||..|+|||++. +..++.++|||||||++|||++|+.||... +..+....+.....
T Consensus 173 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~g~~Pf~~~------------~~~~~~~~i~~~~~--- 235 (345)
T 1xjd_A 173 AKTNTFCGTPDYIAPEILL--GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ------------DEEELFHSIRMDNP--- 235 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHT--TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHCCC---
T ss_pred CcccCCCCCcccCChhhhc--CCCCCChhhhHHHHHHHHHHhcCCCCCCCC------------CHHHHHHHHHhCCC---
Confidence 2556899999999765 457899999999999999999999999643 22223333322211
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHH-HHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMS-HVV 635 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~-evl 635 (672)
. .... ....+.+++.+||..||++||++. |++
T Consensus 236 ----~--~p~~---~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 236 ----F--YPRW---LEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ----C--CCTT---SCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ----C--CCcc---cCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 0 0111 123567888899999999999997 664
No 132
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=337.12 Aligned_cols=261 Identities=26% Similarity=0.382 Sum_probs=191.5
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHH--HcCCCCCceeeeEEEEEc-----CCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEV--LGRLRHPNLVGLKAYYFA-----REEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~-----~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.. ....++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEec
Confidence 47899999999999987 58999999986432 3444444444 556899999999986642 2356899999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCC---------CcEecCCCCCCEEeCCCCcEEEec
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL---------KLTHGNIKSTNVLLDKTGNARVSD 508 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~---------~iiH~Dlkp~NIll~~~~~~kl~D 508 (672)
+++|+|.+++.... .++..++.++.|+++||+||| +. +|+||||||+|||++.++.+||+|
T Consensus 94 ~~~g~L~~~l~~~~------~~~~~~~~i~~qi~~~L~~LH----~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D 163 (336)
T 3g2f_A 94 YPNGSLXKYLSLHT------SDWVSSCRLAHSVTRGLAYLH----TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163 (336)
T ss_dssp CTTCBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHH----CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred CCCCcHHHHHhhcc------cchhHHHHHHHHHHHHHHHHH----hhhccccccccceeecccccceEEEcCCCcEEEee
Confidence 99999999997543 589999999999999999999 67 999999999999999999999999
Q ss_pred cCCCccCCCC-------------CCCCCCcccCCCccccCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 005880 509 FGLSIFAPPS-------------TVPRSNGYRAPELSSSDG-----RKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAG 570 (672)
Q Consensus 509 fG~a~~~~~~-------------~~~~t~~y~aPE~l~~~~-----~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~ 570 (672)
||+++..... ...+|..|+|||++.... ..++.++|||||||++|||++|..||........
T Consensus 164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~ 243 (336)
T 3g2f_A 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243 (336)
T ss_dssp CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence 9999765421 345788999999775311 3456789999999999999999887754332211
Q ss_pred CCCC------CCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 571 MGCG------GAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 571 ~~~~------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.... ...... ..............+... ..........+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 244 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~ 318 (336)
T 3g2f_A 244 YQMAFQTEVGNHPTFE-DMQVLVSREKQRPKFPEA---WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM 318 (336)
T ss_dssp CCCTTHHHHCSSCCHH-HHHHHHTTSCCCCCCCTT---CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhhhcccCCCchHH-HHHhhhcccccCCCCCcc---cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence 1000 001111 111111111111111111 11122355678999999999999999999999999999874
No 133
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.4e-41 Score=348.30 Aligned_cols=259 Identities=24% Similarity=0.360 Sum_probs=182.8
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcC--CCCCceeeeEEEEEcCC----eEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGR--LRHPNLVGLKAYYFARE----EKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~lv~e~~ 438 (672)
.+.||+|+||.||+|+.. |+.||||+++.. ....+.+|.+++.. ++||||+++++++.... ..++||||+
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 83 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEecc
Confidence 478999999999999875 899999998643 44667788888877 79999999999998776 789999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh----CCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT----CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~----~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
++|+|.+++... .+++..++.++.|+++||+|||.. .++.+|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~ 157 (303)
T 3gxj_A 84 EHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp TTCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CC
T ss_pred CCCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCccee
Confidence 999999999754 378888999999999999999932 1146899999999999999999999999999965
Q ss_pred CCCC---------CCCCCCcccCCCccccCCC----CCCchhHHHHHHHHHHHHHhC----------CCCCCCCCCCCCC
Q 005880 515 APPS---------TVPRSNGYRAPELSSSDGR----KQSQKSDVYSFGVLLLELLTG----------KCPSVIDGGGAGM 571 (672)
Q Consensus 515 ~~~~---------~~~~t~~y~aPE~l~~~~~----~~~~~~DV~S~Gvvl~el~tg----------~~P~~~~~~~~~~ 571 (672)
.... ...+|..|+|||++..... .++.++|||||||++|||+|| +.||.......
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~-- 235 (303)
T 3gxj_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD-- 235 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C--
T ss_pred ccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC--
Confidence 5432 2357899999998753211 334689999999999999999 55554322111
Q ss_pred CCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCC
Q 005880 572 GCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVE 645 (672)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 645 (672)
.............. . .+.........+....+.+++.+||+.||++|||+.||++.|+++.+.+
T Consensus 236 -----~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 -----PSVEEMRKVVCEQK-L----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp -----CCCC-CHHHHTTSC-C----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred -----ccHHHHHHHHHHhh-c----CCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 11111111111111 1 1111111111355667899999999999999999999999999987543
No 134
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.2e-39 Score=334.91 Aligned_cols=253 Identities=21% Similarity=0.263 Sum_probs=192.0
Q ss_pred cccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
+.||+|+||.||+|.. .+|+.||||+++.......+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 5799999999999994 47899999999876555678899999999885 799999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc---EEEeccCCCccCCCC--
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN---ARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~---~kl~DfG~a~~~~~~-- 518 (672)
.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++. +||+|||++......
T Consensus 99 ~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 99 LSHIHKR-----RHFNELEASVVVQDVASALDFLH----NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred HHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 9999754 34899999999999999999999 789999999999999998776 999999998755321
Q ss_pred ----------CCCCCCcccCCCccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCh----hH
Q 005880 519 ----------TVPRSNGYRAPELSSSD---GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDL----PR 581 (672)
Q Consensus 519 ----------~~~~t~~y~aPE~l~~~---~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~----~~ 581 (672)
...+|..|+|||++... ...++.++|||||||++|||++|+.||......+..-. ..... ..
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~ 248 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD-RGEACPACQNM 248 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-----CCHHHHHH
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccc-ccccchhHHHH
Confidence 23478899999987531 13578899999999999999999999976543220000 00000 11
Q ss_pred HHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 582 WVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 582 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....+..... ...... . ......+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~i~~~~~--~~~~~~---~---~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 249 LFESIQEGKY--EFPDKD---W---AHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHCCC--CCCHHH---H---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHhccCc--ccCchh---c---ccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1111111110 000000 0 012245788889999999999999999975
No 135
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=7.3e-40 Score=334.21 Aligned_cols=247 Identities=29% Similarity=0.419 Sum_probs=192.8
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcC-CeEEEEEeecCCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR-EEKLLVSEYMPNGS 442 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~~~~g~ 442 (672)
..+.||+|+||.||+|... |+.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||||+++|+
T Consensus 25 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~ 101 (278)
T 1byg_A 25 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101 (278)
T ss_dssp EEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEE
T ss_pred EEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCC
Confidence 3578999999999999875 8899999997543 567899999999999999999999997654 46899999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--CC
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--TV 520 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~ 520 (672)
|.+++.... ...+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++...... ..
T Consensus 102 L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 174 (278)
T 1byg_A 102 LVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174 (278)
T ss_dssp HHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred HHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHH----hCCccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence 999997542 124789999999999999999999 789999999999999999999999999999765543 34
Q ss_pred CCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchh
Q 005880 521 PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLE 599 (672)
Q Consensus 521 ~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (672)
.++..|+|||++. +..++.++||||||+++|||+| |+.||.... ..+........ ....
T Consensus 175 ~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~------------~~~~~~~~~~~-~~~~----- 234 (278)
T 1byg_A 175 KLPVKWTAPEALR--EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP------------LKDVVPRVEKG-YKMD----- 234 (278)
T ss_dssp -CCTTTSCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC------------GGGHHHHHTTT-CCCC-----
T ss_pred CccccccCHHHhC--CCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC------------HHHHHHHHhcC-CCCC-----
Confidence 5677899999764 4578999999999999999998 999996432 11222222111 1000
Q ss_pred hccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCC
Q 005880 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVE 645 (672)
Q Consensus 600 ~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 645 (672)
.. ......+.+++.+||+.||++|||+.|+++.|+++...+
T Consensus 235 --~~---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 235 --AP---DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp --CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --Cc---ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 00 112345778888999999999999999999999997543
No 136
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.3e-39 Score=331.34 Aligned_cols=261 Identities=19% Similarity=0.223 Sum_probs=199.6
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEE-EcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYY-FAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|+. .+++.||||++.... ...++.+|++++..++|++++..++++ ...+..++||||+ +|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCC
Confidence 47899999999999995 578999999875433 234588899999999988877776665 5667889999999 999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe---CCCCcEEEeccCCCccCCCC-
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~~~- 518 (672)
|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||+++.....
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 162 (296)
T 4hgt_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIH----SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp HHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred HHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence 999997543 35999999999999999999999 7899999999999999 78899999999999765432
Q ss_pred -----------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 519 -----------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 519 -----------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||....... .... .....
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~---~~~~~ 231 (296)
T 4hgt_A 163 THQHIPYRENKNLTGTARYASINTHL--GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT------KRQK---YERIS 231 (296)
T ss_dssp TCCBCCCCCSCCCCSCGGGCCHHHHT--TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS------SSSH---HHHHH
T ss_pred cCccCCCCcccccCCCccccchHHhc--CCCCCchhHHHHHHHHHHHHhcCCCCCcccchhh------hhhh---hhhhh
Confidence 345788999999764 5578999999999999999999999997643322 1111 11111
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCC
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPCHENFD 654 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~~~~~ 654 (672)
....... .. .. .. .....+.+++.+||+.||++|||+.||++.|+++...........++
T Consensus 232 ~~~~~~~-~~-~~--~~---~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~d 291 (296)
T 4hgt_A 232 EKKMSTP-IE-VL--CK---GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFD 291 (296)
T ss_dssp HHHHHSC-HH-HH--TT---TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCG
T ss_pred cccccch-hh-hh--hc---cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccc
Confidence 1110000 00 00 00 11246788889999999999999999999999998655544444444
No 137
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-39 Score=338.99 Aligned_cols=241 Identities=20% Similarity=0.287 Sum_probs=188.9
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCC--CceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRH--PNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|...+++.||||++..... ...+.+.+|++++.+++| |||+++++++.+++..++|||+ .+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC-CS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC-CC
Confidence 478999999999999988899999999875432 345778999999999976 9999999999999999999995 58
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... ..+++.++..++.|+++||+||| +.+|+||||||+|||++ ++.+||+|||+++.....
T Consensus 93 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH----~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 93 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp EEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 8999999864 35899999999999999999999 78999999999999997 678999999999866432
Q ss_pred -----CCCCCCcccCCCcccc---------CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHH
Q 005880 519 -----TVPRSNGYRAPELSSS---------DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQ 584 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~---------~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 584 (672)
...+|..|+|||++.. ....++.++|||||||++|||++|+.||.... .......
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----------~~~~~~~ 231 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----------NQISKLH 231 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----------SHHHHHH
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-----------hHHHHHH
Confidence 3468999999998743 12578999999999999999999999996421 1112222
Q ss_pred HHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 585 SVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
........... ... ....+.+++.+||+.||.+|||+.|+++.
T Consensus 232 ~~~~~~~~~~~-------~~~---~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 232 AIIDPNHEIEF-------PDI---PEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHCTTSCCCC-------CCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhcCCcccCC-------ccc---CCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 22211110000 011 12357788889999999999999999864
No 138
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.7e-39 Score=343.11 Aligned_cols=241 Identities=20% Similarity=0.280 Sum_probs=190.4
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCC--CCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLR--HPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++.+++ ||||+++++++..++..++||| +.+
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~ 139 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCS
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCC
Confidence 47899999999999998889999999986533 234578999999999996 5999999999999999999999 568
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++.... .+++.++..++.|+++||+||| +.+|+||||||+|||++ ++.+||+|||+++.....
T Consensus 140 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH----~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 140 IDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp EEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHH----TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 89999998643 5899999999999999999999 88999999999999995 589999999999866432
Q ss_pred -----CCCCCCcccCCCccccC---------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHH
Q 005880 519 -----TVPRSNGYRAPELSSSD---------GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQ 584 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~---------~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 584 (672)
...+|+.|+|||++... ...++.++|||||||++|||++|+.||.... .....+.
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----------~~~~~~~ 278 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----------NQISKLH 278 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----------CHHHHHH
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-----------HHHHHHH
Confidence 45689999999987531 2468999999999999999999999996421 1122222
Q ss_pred HHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 585 SVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
........... ... ....+.+++.+||+.||++|||+.|+++.
T Consensus 279 ~~~~~~~~~~~-------~~~---~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 279 AIIDPNHEIEF-------PDI---PEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHCTTSCCCC-------CCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhCccccCCC-------Ccc---chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 22221111000 011 12357788889999999999999999863
No 139
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=338.63 Aligned_cols=245 Identities=22% Similarity=0.356 Sum_probs=191.6
Q ss_pred hcccCcCCeEEEEEEEEc-CCc----EEEEEEcccC-CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGS----VVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.+.||+|+||.||+|+.. +++ .||+|.++.. .....+.+.+|++++++++||||+++++++.... .++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~ 98 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLM 98 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEec
Confidence 478999999999999954 444 3578877543 3345678999999999999999999999998754 78999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 ~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 99 PFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLE----DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp SSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred CCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHh----hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 9999999998653 35899999999999999999999 789999999999999999999999999999766432
Q ss_pred -------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 519 -------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 519 -------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
...++..|+|||++. +..++.++|||||||++|||++ |+.||..... .+.... ....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~------------~~~~~~-~~~~ 235 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA------------SEISSI-LEKG 235 (327)
T ss_dssp ---------CCCGGGSCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG------------GGHHHH-HHTT
T ss_pred cccccccCCCccccccCHHHHc--CCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH------------HHHHHH-HHcC
Confidence 233466899999765 5678999999999999999999 9999964321 111111 1111
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
... .........+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 236 ~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 236 ERL----------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CCC----------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred CCC----------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 100 0011122357788899999999999999999999999864
No 140
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=4.5e-39 Score=328.53 Aligned_cols=238 Identities=30% Similarity=0.485 Sum_probs=192.6
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 93 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 93 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCC
Confidence 478999999999999965 578999999864322 2356789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 94 ~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH----~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 94 GTVYRELQKL-----SKFDEQRTATYITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp EEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----TTTCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCEecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 9999999754 34899999999999999999999 889999999999999999999999999998655443
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||... ...+...........
T Consensus 165 ~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~------------~~~~~~~~~~~~~~~----- 225 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEAN------------TYQETYKRISRVEFT----- 225 (279)
T ss_dssp ---CCCCTTCCHHHHT--TCCCCTTHHHHHHHHHHHHHHHSSCTTCCS------------SHHHHHHHHHHTCCC-----
T ss_pred cccCCCCCccCHhHhc--cCCCCccchhHhHHHHHHHHHHCCCCCCCC------------cHHHHHHHHHhCCCC-----
Confidence 456789999999764 567889999999999999999999999632 222222222221100
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
... .....+.+++.+||+.||++|||+.|+++.
T Consensus 226 ----~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 226 ----FPD---FVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ----CCT---TSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ----CCC---cCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 001 122356788889999999999999999863
No 141
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.7e-39 Score=340.12 Aligned_cols=241 Identities=22% Similarity=0.357 Sum_probs=189.6
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|+.. +|+.||||++++... ...+.+.+|..++.++ +||||+++++++.+.+..++||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999965 589999999975432 2345688999999887 89999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
+|+|.+++... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++++||+|||+++....
T Consensus 94 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 94 GGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 99999999754 24899999999999999999999 78999999999999999999999999999976422
Q ss_pred ---CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 518 ---STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 518 ---~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
....+|..|+|||++. +..++.++|||||||++|||++|+.||......... ................
T Consensus 165 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----~~~~~~~~~~~i~~~~--- 235 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILR--GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP----DQNTEDYLFQVILEKQ--- 235 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHT--TCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-----------CHHHHHHHHHHCC---
T ss_pred CcccccCCCccccCccccC--CCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccc----ccccHHHHHHHHHcCC---
Confidence 2456899999999765 457899999999999999999999999653221100 0011111111111111
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM 631 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 631 (672)
...... ....+.+++.+||+.||++||++
T Consensus 236 -----~~~p~~---~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 236 -----IRIPRS---LSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -----CCCCTT---SCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -----CCCCCC---CCHHHHHHHHHHhcCCHhHCCCC
Confidence 000111 22356788889999999999996
No 142
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.4e-39 Score=331.31 Aligned_cols=250 Identities=19% Similarity=0.251 Sum_probs=192.6
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|... +++.||||++...... ..+.+.+|++++.+++||||+++++++..++..++||||+++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLING 118 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCC
Confidence 478999999999999965 6899999999754322 347789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++... .++++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 119 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 119 VDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAH----AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp EEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 9999999754 34899999999999999999999 789999999999999999999999999998765432
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||.... ...+.........
T Consensus 190 ~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------------~~~~~~~~~~~~~-- 252 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFS--ESHATYRADIYALTCVLYECLTGSPPYQGDQ-------------LSVMGAHINQAIP-- 252 (309)
T ss_dssp -------CCGGGCCGGGTC--C----CCCHHHHHHHHHHHHHHSSCSSCSCH-------------HHHHHHHHHSCCC--
T ss_pred ccccccCCCcCccCHHHHc--CCCCCchHhHHHHHHHHHHHHHCCCCCCCch-------------HHHHHHHhccCCC--
Confidence 345788999999764 5678899999999999999999999996421 1122222221110
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHHhcCCC
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-NMSHVVKLIEELRGVEV 646 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-t~~evl~~L~~i~~~~~ 646 (672)
.+.. ... .....+.+++.+||+.||++|| +++++++.|+++.....
T Consensus 253 --~~~~-~~~---~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 253 --RPST-VRP---GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp --CGGG-TST---TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred --Cccc-cCC---CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 0000 011 1223577888899999999999 99999999998765443
No 143
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.2e-38 Score=332.45 Aligned_cols=242 Identities=21% Similarity=0.327 Sum_probs=196.4
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc------hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG------GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
+.+.||+|+||.||+|+.. +|+.||||+++..... ..+++.+|++++.+++||||+++++++.+.+..++|||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 95 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE 95 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEE
Confidence 4578999999999999965 6899999998753321 36789999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC----cEEEeccCCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG----NARVSDFGLS 512 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~----~~kl~DfG~a 512 (672)
|+++++|.+++... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 96 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH----~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 96 LVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp CCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 99999999999753 35899999999999999999999 78999999999999999887 7999999999
Q ss_pred ccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 513 IFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 513 ~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
...... ...+|..|+|||++. +..++.++||||||+++|||++|+.||.... ..+.......
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~~~~i~~ 232 (321)
T 2a2a_A 167 HEIEDGVEFKNIFGTPEFVAPEIVN--YEPLGLEADMWSIGVITYILLSGASPFLGDT------------KQETLANITS 232 (321)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHT--TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------------HHHHHHHHHT
T ss_pred eecCccccccccCCCCCccCccccc--CCCCCCccccHHHHHHHHHHHHCCCCCCCCC------------HHHHHHHHHh
Confidence 766543 455788999999764 5678999999999999999999999996431 2222222222
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
... .+++... . .....+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~---~~~~~~~--~---~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 233 VSY---DFDEEFF--S---HTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp TCC---CCCHHHH--T---TCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccc---ccChhhh--c---ccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 110 0111110 0 11235778888999999999999999985
No 144
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.5e-39 Score=343.49 Aligned_cols=189 Identities=30% Similarity=0.420 Sum_probs=155.4
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccC--CcchHHHHHHHHHHHcCCC-CCceeeeEEEEEcCC--eEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDA--SIGGKREFEQHMEVLGRLR-HPNLVGLKAYYFARE--EKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~~lv~e~~ 438 (672)
.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++.++. ||||+++++++...+ ..++||||+
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 47899999999999995 46899999998653 2334567889999999997 999999999998644 689999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC-
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP- 517 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~- 517 (672)
+ |+|.+++... .+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 162 (388)
T 3oz6_A 94 E-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLH----SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162 (388)
T ss_dssp S-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSC
T ss_pred C-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCCCHHHeEEcCCCCEEecCCccccccccc
Confidence 7 6999999753 4899999999999999999999 78999999999999999999999999999976432
Q ss_pred -------------------------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 518 -------------------------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 518 -------------------------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
....+|..|+|||++.. ...++.++|||||||++|||++|++||...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG-STKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp CCCCCCGGGCCC---------------CCCGGGGCCHHHHTT-CCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccccCCcccCCcCCHHHhcC-CCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 13467889999998753 357899999999999999999999999643
No 145
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.5e-39 Score=332.66 Aligned_cols=246 Identities=26% Similarity=0.373 Sum_probs=193.6
Q ss_pred hcccCcCCeEEEEEEEEcC----CcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEc-CCeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLDD----GSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFA-REEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~ 438 (672)
.+.||+|+||.||+|+..+ +..||+|.++... ....+.+.+|++++++++||||+++++++.. ++..++||||+
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 109 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCC
Confidence 4789999999999999542 2368999987543 3345789999999999999999999998654 55789999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 518 (672)
++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 110 ~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 110 KHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLA----SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp TTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred CCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 9999999997543 45899999999999999999999 789999999999999999999999999999765432
Q ss_pred ---------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 519 ---------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 519 ---------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
...++..|+|||++. +..++.++||||||+++|||++ |.+||...... + .......
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---------~---~~~~~~~ 247 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---------D---ITVYLLQ 247 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT---------T---HHHHHHT
T ss_pred chhccccccCCCCCccccChHHhc--CCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH---------H---HHHHHhc
Confidence 334466899999764 4578999999999999999999 45555432211 1 1111111
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
... ... .. .....+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 248 ~~~---~~~-----~~---~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 248 GRR---LLQ-----PE---YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp TCC---CCC-----CT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCC---CCC-----Cc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 110 000 01 112357888899999999999999999999999875
No 146
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=327.69 Aligned_cols=238 Identities=24% Similarity=0.382 Sum_probs=176.8
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++.+++||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCC
Confidence 47899999999999996 5789999999864321 2346789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++.... .++++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 96 GEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLH----SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp EEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred CcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 99999998543 45899999999999999999999 789999999999999999999999999999765432
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||........ ......
T Consensus 168 ~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------------~~~~~~------- 226 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIAT--RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT------------LNKVVL------- 226 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------------CCS-------
T ss_pred cceeccCCCCcCCcchhc--CCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH------------HHHHhh-------
Confidence 345788999999764 45788999999999999999999999975432210 000000
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
........ ....+.+++.+||+.||++|||+.|+++
T Consensus 227 --~~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 227 --ADYEMPSF---LSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp --SCCCCCTT---SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --cccCCccc---cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 00000111 1235778888999999999999999974
No 147
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.5e-39 Score=331.54 Aligned_cols=242 Identities=26% Similarity=0.288 Sum_probs=193.5
Q ss_pred ccCcCCeEEEEEEEEc---CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 367 MLGKGGFGTAYKAVLD---DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.||+|+||.||+|.+. +++.||||+++.... ...+++.+|+++++.++||||+++++++ ..+..++||||++++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 102 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 102 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence 7999999999999643 468899999975432 2357899999999999999999999998 567789999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++.... .+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 103 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 103 PLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLE----ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp EHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred CHHHHHHhCc-----CCCHHHHHHHHHHHHHHHHHHH----hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 9999998643 4899999999999999999999 789999999999999999999999999999766443
Q ss_pred -----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
...++..|+|||++. +..++.++||||||+++|||++ |+.||.... ..+..... .....
T Consensus 174 ~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------------~~~~~~~~-~~~~~ 238 (291)
T 1xbb_A 174 YKAQTHGKWPVKWYAPECIN--YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK------------GSEVTAML-EKGER 238 (291)
T ss_dssp EEC----CCCGGGCCHHHHH--HCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC------------HHHHHHHH-HTTCC
T ss_pred ccccccCCCCceeeChHHhc--cCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC------------HHHHHHHH-HcCCC
Confidence 223457799999764 4568899999999999999999 999996432 11222211 11110
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.. .. ......+.+++.+||+.||++||++.|+++.|+++..
T Consensus 239 ~~-------~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 239 MG-------CP---AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp CC-------CC---TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CC-------CC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 00 00 1123457888899999999999999999999999853
No 148
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=339.83 Aligned_cols=260 Identities=25% Similarity=0.400 Sum_probs=199.5
Q ss_pred HhcccCcCCeEEEEEEEE-----cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC--eEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVL-----DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE--EKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e 436 (672)
+.+.||+|+||.||+|++ .+|+.||||++........+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEE
Confidence 357899999999999984 368999999998766666788999999999999999999999987654 6789999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|+++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 125 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLG----TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp CCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred CCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH----hCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 999999999998653 35899999999999999999999 7899999999999999999999999999998765
Q ss_pred CC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCC--CCCCC-CCCChhHHHHH
Q 005880 517 PS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGA--GMGCG-GAVDLPRWVQS 585 (672)
Q Consensus 517 ~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~--~~~~~-~~~~~~~~~~~ 585 (672)
.. ...++..|+|||++. +..++.++||||||+++|||+||+.||....... ..... ........+..
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHH--HCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhc--CCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence 43 233456799999764 4568899999999999999999999975320000 00000 00000001111
Q ss_pred HHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
....... ..........+.+++.+||+.||++|||+.||++.|+++++
T Consensus 275 ~~~~~~~----------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 275 LLKNNGR----------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHTTCC----------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhhcCCC----------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111100 00111223467888999999999999999999999999864
No 149
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=343.11 Aligned_cols=253 Identities=20% Similarity=0.247 Sum_probs=188.7
Q ss_pred hcccCcCCeEEEEEEEEc----CCcEEEEEEcccCCcc-----------hHHHHHHHHHHHcCCCCCceeeeEEEEEc--
Q 005880 365 AEMLGKGGFGTAYKAVLD----DGSVVAVKRLKDASIG-----------GKREFEQHMEVLGRLRHPNLVGLKAYYFA-- 427 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~~~~~-- 427 (672)
.+.||+|+||.||+|... ++..||||++...... ....+.+|+..+..++||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 478999999999999975 5788999998754321 12346678889999999999999999987
Q ss_pred --CCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC--c
Q 005880 428 --REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG--N 503 (672)
Q Consensus 428 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~--~ 503 (672)
....++||||+ +++|.+++.... .+++.+++.++.|+++||+||| +.+|+||||||+||+++.++ .
T Consensus 122 ~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 122 KGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIH----ENEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp SSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEESSSTTS
T ss_pred CCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCcCHHHEEEccCCCCc
Confidence 67889999999 999999997542 5999999999999999999999 78999999999999999877 9
Q ss_pred EEEeccCCCccCCC------------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 005880 504 ARVSDFGLSIFAPP------------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGM 571 (672)
Q Consensus 504 ~kl~DfG~a~~~~~------------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~ 571 (672)
+||+|||+++.... ....+|..|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--- 266 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHK--GVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD--- 266 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHH--TCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC---
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhc--CCCCCchhhHHHHHHHHHHHHhCCCCccccccc---
Confidence 99999999976532 1346788999999765 457899999999999999999999999643211
Q ss_pred CCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHh
Q 005880 572 GCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELR 642 (672)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 642 (672)
.............. + ................+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 267 -----~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 267 -----PVAVQTAKTNLLDE----L-PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp -----HHHHHHHHHHHHHT----T-THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred -----cHHHHHHHHhhccc----c-cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 01111111111111 0 0000000000012336788888999999999999999999998764
No 150
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=333.28 Aligned_cols=253 Identities=21% Similarity=0.296 Sum_probs=190.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc--hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG--GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCc
Confidence 478999999999999975 5899999998654332 3567889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 88 VLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCH----KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp HHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred hHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 999988754 34899999999999999999999 789999999999999999999999999999776532
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH---------
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV--------- 587 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 587 (672)
...+|..|+|||++.. ...++.++||||||+++|||++|+.||...... +....+....
T Consensus 159 ~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 228 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVG-DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV---------DQLYLIRKTLGDLIPRHQQ 228 (311)
T ss_dssp -------GGGCCHHHHHT-CSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---------HHHHHHHHHHCSCCHHHHH
T ss_pred cCCCcCCccccChHHHhc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHHHhccccccccc
Confidence 3467889999998643 356799999999999999999999999643211 0111111100
Q ss_pred ---hhhccccccchhhccccCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 588 ---REEWTAEVFDLELMRYKDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 588 ---~~~~~~~~~d~~~~~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..........+........ ......+.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 229 VFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000000000000000 112345778999999999999999999974
No 151
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=347.58 Aligned_cols=244 Identities=20% Similarity=0.262 Sum_probs=193.7
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +|+.||||++++... ...+.+.+|.+++..++||||+++++++.+.+..|+||||+++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~g 145 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG 145 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCC
Confidence 478999999999999975 699999999975322 1234578999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++++||+|||+++.....
T Consensus 146 g~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH----~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 146 GDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVH----RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp CBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 99999997542 35899999999999999999999 789999999999999999999999999999766543
Q ss_pred ----CCCCCCcccCCCccccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 519 ----TVPRSNGYRAPELSSSD-----GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~-----~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
...||..|+|||++... ...++.++|||||||++|||++|+.||... +..+....+...
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~------------~~~~~~~~i~~~ 285 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD------------STAETYGKIVHY 285 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS------------SHHHHHHHHHTH
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC------------CHHHHHHHHHhc
Confidence 34789999999987531 346899999999999999999999999643 222333333322
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCC---CCHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQR---PNMSHVVK 636 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~R---Pt~~evl~ 636 (672)
...... +.. . .....++.+++.+||. +|++| |++.|+++
T Consensus 286 ~~~~~~--p~~--~---~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 286 KEHLSL--PLV--D---EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHCCC--C---------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ccCcCC--Ccc--c---cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 110000 000 0 1122356788889999 99998 58888864
No 152
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.3e-39 Score=343.68 Aligned_cols=239 Identities=25% Similarity=0.347 Sum_probs=185.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHH-HcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEV-LGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|+.. +++.||||++++.... ....+.+|..+ ++.++||||+++++++.+.+..|+||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999965 5889999999764332 33456667776 577899999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
+|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++++||+|||+++....
T Consensus 123 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 123 GGELFYHLQRER-----CFLEPRARFYAAEIASALGYLH----SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 999999997543 4889999999999999999999 78999999999999999999999999999975322
Q ss_pred ---CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 518 ---STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 518 ---~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
....||..|+|||++. +..++.++|||||||++|||++|+.||... +..+....+.....
T Consensus 194 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~G~~Pf~~~------------~~~~~~~~i~~~~~--- 256 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLH--KQPYDRTVDWWCLGAVLYEMLYGLPPFYSR------------NTAEMYDNILNKPL--- 256 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHT--TCCCCTHHHHHHHHHHHHHHHHSSCTTCCS------------BHHHHHHHHHHSCC---
T ss_pred CccccccCCccccCHHHhC--CCCCCchhhhHHHHHHHHHHHcCCCCCCCC------------CHHHHHHHHHhccc---
Confidence 2557899999999765 567899999999999999999999999643 22333333333211
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 638 (672)
....... ..+.+++.+||+.||++||++.+.++.+
T Consensus 257 ------~~~~~~~---~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 257 ------QLKPNIT---NSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp ------CCCSSSC---HHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred ------CCCCCCC---HHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 1111122 3467788899999999999986544433
No 153
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=343.22 Aligned_cols=242 Identities=17% Similarity=0.232 Sum_probs=193.7
Q ss_pred hcccCcCCeEEEEEEE------EcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCC---CCceeeeEEEEEcCCeEEEEE
Q 005880 365 AEMLGKGGFGTAYKAV------LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR---HPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~------~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 435 (672)
.+.||+|+||.||+|. ..+++.||||+++.. ...++.+|++++.+++ |+||+++++++...+..++||
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~ 146 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVG 146 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEE
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEE
Confidence 4789999999999994 456899999999754 3456777888777776 999999999999999999999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-----------CCcE
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK-----------TGNA 504 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~-----------~~~~ 504 (672)
||+++|+|.+++..........+++..++.|+.|+++||+||| +.+|+||||||+|||++. ++.+
T Consensus 147 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH----~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~ 222 (365)
T 3e7e_A 147 ELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH----DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGL 222 (365)
T ss_dssp CCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECGGGTCC------CTTE
T ss_pred eccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh----hCCeecCCCCHHHEEecccccCccccccccCCE
Confidence 9999999999997533222356999999999999999999999 889999999999999998 8999
Q ss_pred EEeccCCCccCC---C----CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCC
Q 005880 505 RVSDFGLSIFAP---P----STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAV 577 (672)
Q Consensus 505 kl~DfG~a~~~~---~----~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~ 577 (672)
||+|||+++... . ....||.+|+|||++. +..++.++|||||||++|||+||+.||.......
T Consensus 223 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-------- 292 (365)
T 3e7e_A 223 ALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLS--NKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-------- 292 (365)
T ss_dssp EECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHT--TCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE--------
T ss_pred EEeeCchhhhhhccCCCceeeeecCCCCCCChHHhc--CCCCCccccHHHHHHHHHHHHhCCCccccCCCCc--------
Confidence 999999996542 1 2556899999999765 4568999999999999999999999996432211
Q ss_pred ChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHHHHHhc
Q 005880 578 DLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQR-PNMSHVVKLIEELRG 643 (672)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~R-Pt~~evl~~L~~i~~ 643 (672)
............ . ..+.+++..|++.+|.+| |++.++.+.|+++..
T Consensus 293 ----------------~~~~~~~~~~~~-~---~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 293 ----------------CKPEGLFRRLPH-L---DMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp ----------------EEECSCCTTCSS-H---HHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred ----------------eeechhccccCc-H---HHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 000111111111 2 245567779999999999 688999999988764
No 154
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.3e-38 Score=337.77 Aligned_cols=190 Identities=24% Similarity=0.376 Sum_probs=166.7
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCC-----CCceeeeEEEEEcCCeEEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR-----HPNLVGLKAYYFAREEKLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~~ 438 (672)
.+.||+|+||.||+|+. .+++.||||+++... ...+.+..|++++++++ ||||+++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC
Confidence 47899999999999996 468999999997532 24567788999998886 999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC------------------
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK------------------ 500 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~------------------ 500 (672)
+++|.+++..... ..+++..+..++.|+++||+||| +.+|+||||||+|||++.
T Consensus 119 -~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~ 190 (360)
T 3llt_A 119 -GPSLYEIITRNNY---NGFHIEDIKLYCIEILKALNYLR----KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKK 190 (360)
T ss_dssp -CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCE
T ss_pred -CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCcccEEEccccccccccchhccccccc
Confidence 9999999986542 35899999999999999999999 789999999999999975
Q ss_pred -------CCcEEEeccCCCccCCCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 501 -------TGNARVSDFGLSIFAPPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 501 -------~~~~kl~DfG~a~~~~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
++.+||+|||+++..... ...+|..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 191 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 191 IQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVIL--NLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp EEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHT--TCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHc--CCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 788999999999865543 566799999999765 557899999999999999999999999643
No 155
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.9e-39 Score=345.95 Aligned_cols=242 Identities=21% Similarity=0.296 Sum_probs=184.8
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHc-CCCCCceeeeEEEEEc----CCeEEEEEeecC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLG-RLRHPNLVGLKAYYFA----REEKLLVSEYMP 439 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~----~~~~~lv~e~~~ 439 (672)
+.||+|+||.||+|+.. +|+.||||+++. ...+.+|++++. ..+||||+++++++.. ....++||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 57999999999999965 689999999863 245778888874 4589999999999875 557899999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC---CCcEEEeccCCCccCC
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK---TGNARVSDFGLSIFAP 516 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~---~~~~kl~DfG~a~~~~ 516 (672)
+|+|.+++.... ...+++..+..|+.|+++||+||| +.+|+||||||+|||++. ++.+||+|||+++...
T Consensus 143 gg~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 143 GGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp SEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred CCcHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 999999998643 245999999999999999999999 789999999999999997 7899999999998665
Q ss_pred CC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 517 PS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 517 ~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
.. ...+|..|+|||++. +..++.++|||||||++|||++|+.||........ .......+......
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--------~~~~~~~i~~~~~~ 285 (400)
T 1nxk_A 216 SHNSLTTPCYTPYYVAPEVLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI--------SPGMKTRIRMGQYE 285 (400)
T ss_dssp -----------CTTCCGGGSC--CCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS--------CCSHHHHHHHTCCC
T ss_pred CCCccccCCCCCCccCHhhcC--CCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc--------cHHHHHHHHcCccc
Confidence 42 456789999999764 56789999999999999999999999976432210 00111111111110
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
...+ .. .....++.+++.+||+.||++|||+.|+++.
T Consensus 286 --~~~~---~~---~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 286 --FPNP---EW---SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp --CCTT---TT---TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --CCCc---cc---ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000 01 1122357788889999999999999999874
No 156
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=343.88 Aligned_cols=244 Identities=24% Similarity=0.338 Sum_probs=194.1
Q ss_pred hcccCcCCeEEEEEEEE----cCCcEEEEEEcccCC----cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEE
Q 005880 365 AEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDAS----IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 435 (672)
.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++.++ +||||+++++++...+..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 47899999999999997 368999999987532 12345678899999999 6999999999999999999999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+++|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+|||++.++++||+|||+++..
T Consensus 139 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 139 DYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLH----KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp CCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 999999999999754 34899999999999999999999 789999999999999999999999999999765
Q ss_pred CCC------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 516 PPS------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 516 ~~~------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
... ...+|..|+|||++......++.++|||||||++|||++|+.||...... .............
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--------~~~~~~~~~~~~~ 281 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK--------NSQAEISRRILKS 281 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC--------CCHHHHHHHHHHC
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc--------chHHHHHHHHhcc
Confidence 432 34689999999987644456789999999999999999999999754322 1222222222211
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVKL 637 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 637 (672)
.. ... ......+.+++.+||+.||++|| ++.|+++.
T Consensus 282 ~~---------~~~---~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 282 EP---------PYP---QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CC---------CCC---TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CC---------CCC---cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 10 001 11223567888899999999999 89998764
No 157
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=342.20 Aligned_cols=262 Identities=17% Similarity=0.181 Sum_probs=199.2
Q ss_pred hcccCcCCeEEEEEEEEcC---------CcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceee---------------
Q 005880 365 AEMLGKGGFGTAYKAVLDD---------GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVG--------------- 420 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~--------------- 420 (672)
.+.||+|+||.||+|+... ++.||||++... +.+.+|++++++++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 4789999999999999663 789999998744 46889999999999999987
Q ss_pred eEEEEEc-CCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC
Q 005880 421 LKAYYFA-REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499 (672)
Q Consensus 421 l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~ 499 (672)
+++++.. ++..++||||+ +|+|.+++.... ...+++..++.++.|+++||+||| +.+|+||||||+||+++
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dikp~NIl~~ 193 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLH----ENEYVHGNVTAENIFVD 193 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCCGGGEEEE
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCHHHEEEc
Confidence 6778776 67889999999 999999998652 245999999999999999999999 78999999999999999
Q ss_pred CCC--cEEEeccCCCccCCCC------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 500 KTG--NARVSDFGLSIFAPPS------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 500 ~~~--~~kl~DfG~a~~~~~~------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
.++ .+||+|||+++..... ...+|..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHK--GCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHT--TCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHc--cCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 998 8999999999765421 236788999999764 557899999999999999999999999754
Q ss_pred CCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCC
Q 005880 566 GGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVE 645 (672)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 645 (672)
... ...+........ . ......+... .... ....+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 272 ~~~-------~~~~~~~~~~~~-~-~~~~~~~~~~-~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 272 LPN-------TEDIMKQKQKFV-D-KPGPFVGPCG-HWIR---PSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp TTC-------HHHHHHHHHHHH-H-SCCCEECTTS-CEEC---CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CcC-------HHHHHHHHHhcc-C-Chhhhhhhcc-ccCC---CcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 211 001111111111 1 1111111110 0011 1245778888999999999999999999999997654
Q ss_pred CCCCCCCCC
Q 005880 646 VSPCHENFD 654 (672)
Q Consensus 646 ~~~~~~~~~ 654 (672)
.......++
T Consensus 339 ~~~~~~~~d 347 (352)
T 2jii_A 339 RVSPYDPIG 347 (352)
T ss_dssp TCCTTSCCC
T ss_pred CCCcCcccc
Confidence 444333333
No 158
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.6e-38 Score=325.27 Aligned_cols=241 Identities=23% Similarity=0.325 Sum_probs=194.6
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||+++|
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 90 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCC
Confidence 478999999999999965 58999999986543 234567889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc---EEEeccCCCccCCCC
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN---ARVSDFGLSIFAPPS 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~---~kl~DfG~a~~~~~~ 518 (672)
+|.+.+... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++......
T Consensus 91 ~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 91 ELFEDIVAR-----EFYSEADASHCIQQILESIAYCH----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp BHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred CHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 999888754 34899999999999999999999 789999999999999986655 999999999766543
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||... ................
T Consensus 162 ~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~~l~~g~~pf~~~------------~~~~~~~~~~~~~~~~- 226 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLK--KDPYSKPVDIWACGVILYILLVGYPPFWDE------------DQHRLYAQIKAGAYDY- 226 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHT--TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHTCCCC-
T ss_pred ccccCCCCCcCCcCchhhc--CCCCCcccchHHHHHHHHHHHHCCCCCCCC------------chhHHHHHHHhccccC-
Confidence 356788999999764 557899999999999999999999999643 2222222222221110
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..+ .. ......+.+++.+||+.||++|||+.|+++
T Consensus 227 -~~~---~~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 227 -PSP---EW---DTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp -CTT---TT---TTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -Cch---hh---cccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000 00 112235778888999999999999999986
No 159
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.2e-39 Score=335.92 Aligned_cols=251 Identities=22% Similarity=0.327 Sum_probs=200.5
Q ss_pred HhcccCcCCeEEEEEEEEc------CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVLD------DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
..+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEE
Confidence 3578999999999999854 368899999975433 345678999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCC
Q 005880 437 YMPNGSLFWLLHGNRG-----PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL 511 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~ 511 (672)
|+++|+|.+++..... ....++++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~NIli~~~~~~kl~Dfg~ 184 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGM 184 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH----HCCCccCCCccceEEEcCCCeEEECcCcc
Confidence 9999999999975320 11245799999999999999999999 78999999999999999999999999999
Q ss_pred CccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHH
Q 005880 512 SIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWV 583 (672)
Q Consensus 512 a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~ 583 (672)
++..... ...++..|+|||++. +..++.++||||||+++|||++ |+.||... ...+..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~el~~~g~~p~~~~------------~~~~~~ 250 (322)
T 1p4o_A 185 TRDIYETDYYRKGGKGLLPVRWMSPESLK--DGVFTTYSDVWSFGVVLWEIATLAEQPYQGL------------SNEQVL 250 (322)
T ss_dssp CCGGGGGGCEEGGGSSEECGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS------------CHHHHH
T ss_pred ccccccccccccccCCCCCCCccChhhhc--cCCCCchhhHHHHHHHHHHHHhcCCCccccC------------CHHHHH
Confidence 9755332 233467899999764 4578999999999999999999 89998632 222222
Q ss_pred HHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
......... . .. ......+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 251 ~~~~~~~~~-~-------~~---~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 251 RFVMEGGLL-D-------KP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHHHTTCCC-C-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHHcCCcC-C-------CC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 222222110 0 01 1123457788889999999999999999999998754
No 160
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=9.8e-39 Score=330.35 Aligned_cols=241 Identities=21% Similarity=0.343 Sum_probs=193.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccH
Confidence 578999999999999965 6899999999865544567789999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe---CCCCcEEEeccCCCccCCCC--
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~~~-- 518 (672)
.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||++ ++++.+||+|||++......
T Consensus 94 ~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 164 (304)
T 2jam_A 94 FDRILER-----GVYTEKDASLVIQQVLSAVKYLH----ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164 (304)
T ss_dssp HHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence 9998754 24899999999999999999999 7899999999999999 78899999999999765443
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||.... .......+...... +.
T Consensus 165 ~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~~~~i~~~~~~---~~ 227 (304)
T 2jam_A 165 STACGTPGYVAPEVLA--QKPYSKAVDCWSIGVITYILLCGYPPFYEET------------ESKLFEKIKEGYYE---FE 227 (304)
T ss_dssp HHHHSCCCBCCTTTBS--SCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC------------HHHHHHHHHHCCCC---CC
T ss_pred ccccCCCCccChHHhc--cCCCCchhhHHHHHHHHHHHHHCCCCCCCCC------------HHHHHHHHHcCCCC---CC
Confidence 234788999999764 5678999999999999999999999996431 22222222221110 00
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .. ......+.+++.+||+.||++|||+.|+++
T Consensus 228 ~~--~~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 228 SP--FW---DDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TT--TT---TTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cc--cc---ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 00 112245778888999999999999999986
No 161
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.7e-38 Score=322.33 Aligned_cols=250 Identities=21% Similarity=0.363 Sum_probs=198.8
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc------hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG------GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
..+.||+|+||.||+|+.. +|+.||||.++..... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 88 (283)
T 3bhy_A 9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 88 (283)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEe
Confidence 3578999999999999976 6899999998753221 36789999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC----cEEEeccCCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG----NARVSDFGLS 512 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~----~~kl~DfG~a 512 (672)
|+++++|.+++... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 89 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 89 LVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLH----SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred ecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 99999999999753 35899999999999999999999 78999999999999999877 8999999999
Q ss_pred ccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 513 IFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 513 ~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
...... ...++..|+|||++. +..++.++||||||+++|||++|+.||.... ..+.......
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------------~~~~~~~~~~ 225 (283)
T 3bhy_A 160 HKIEAGNEFKNIFGTPEFVAPEIVN--YEPLGLEADMWSIGVITYILLSGASPFLGET------------KQETLTNISA 225 (283)
T ss_dssp EECC--------CCCGGGCCHHHHT--TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS------------HHHHHHHHHT
T ss_pred eeccCCCcccccCCCcCccCcceec--CCCCCcchhhhhHHHHHHHHHHCCCCCCCcc------------hHHHHHHhHh
Confidence 866543 345788999999764 5678999999999999999999999996432 1122222211
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHHHHhcC
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK--LIEELRGV 644 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~--~L~~i~~~ 644 (672)
... ....... ......+.+++.+||+.||++|||+.|+++ .++.+.+.
T Consensus 226 ~~~---~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 226 VNY---DFDEEYF-----SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp TCC---CCCHHHH-----TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred ccc---CCcchhc-----ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 110 0011100 111235778888999999999999999997 56666543
No 162
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.8e-40 Score=344.14 Aligned_cols=252 Identities=24% Similarity=0.346 Sum_probs=199.1
Q ss_pred HhcccCcCCeEEEEEEEEcC-C-----cEEEEEEcccCCc-chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLDD-G-----SVVAVKRLKDASI-GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~-g-----~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 435 (672)
..+.||+|+||.||+|.... + ..||+|.++.... ...+.+.+|+++++++ +||||+++++++.+.+..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 35789999999999999642 2 4799999976432 3457799999999999 8999999999999999999999
Q ss_pred eecCCCChhHHhhcCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEE
Q 005880 436 EYMPNGSLFWLLHGNRG---------PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARV 506 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl 506 (672)
||+++|+|.+++..... .....+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl 205 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA----SKNCIHRDVAARNVLLTNGHVAKI 205 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGCEEEGGGEEEB
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh----cCCcccCCcccceEEECCCCeEEE
Confidence 99999999999975320 01235899999999999999999999 789999999999999999999999
Q ss_pred eccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCC
Q 005880 507 SDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVD 578 (672)
Q Consensus 507 ~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~ 578 (672)
+|||+++..... ...++..|+|||++. +..++.++|||||||++|||+| |..||.....
T Consensus 206 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----------- 272 (333)
T 2i1m_A 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV----------- 272 (333)
T ss_dssp CCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHH--HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS-----------
T ss_pred CccccccccccccceeecCCCCCCccccCHHHhc--cCCCChHHHHHHHHHHHHHHHcCCCCCCcccch-----------
Confidence 999999755332 223466899999765 4578999999999999999999 9999864321
Q ss_pred hhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 579 LPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
............... .. ......+.+++.+||+.||.+|||+.||++.|+++..
T Consensus 273 -~~~~~~~~~~~~~~~-------~~---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 273 -NSKFYKLVKDGYQMA-------QP---AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp -SHHHHHHHHHTCCCC-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -hHHHHHHHhcCCCCC-------CC---CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 112222222221100 00 1112357788899999999999999999999998753
No 163
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=7.7e-39 Score=327.41 Aligned_cols=240 Identities=24% Similarity=0.396 Sum_probs=194.9
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEc----------------
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA---------------- 427 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~---------------- 427 (672)
.+.||+|+||.||+|+.. +|+.||||+++... ..+.+|++++++++||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccC
Confidence 478999999999999976 79999999997543 357789999999999999999998864
Q ss_pred CCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEe
Q 005880 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVS 507 (672)
Q Consensus 428 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~ 507 (672)
....++||||+++|+|.+++.... ...+++..++.++.|+++||.||| +.+|+||||||+||++++++.+||+
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~ 164 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIH----SKKLINRDLKPSNIFLVDTKQVKIG 164 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEEC
T ss_pred cceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCCHHHEEEcCCCCEEEC
Confidence 345789999999999999997543 245899999999999999999999 7899999999999999999999999
Q ss_pred ccCCCccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHH
Q 005880 508 DFGLSIFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWV 583 (672)
Q Consensus 508 DfG~a~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 583 (672)
|||++...... ...++..|+|||++. +..++.++||||||+++|||++|..|+... ..+.
T Consensus 165 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------------~~~~ 228 (284)
T 2a19_B 165 DFGLVTSLKNDGKRTRSKGTLRYMSPEQIS--SQDYGKEVDLYALGLILAELLHVCDTAFET--------------SKFF 228 (284)
T ss_dssp CCTTCEESSCCSCCCCCCSCCTTSCHHHHH--CSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------------HHHH
T ss_pred cchhheeccccccccccCCcccccChhhhc--cCCCcchhhhHHHHHHHHHHHhcCCcchhH--------------HHHH
Confidence 99999766543 455788999999764 457899999999999999999999886321 1111
Q ss_pred HHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCC
Q 005880 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVE 645 (672)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 645 (672)
... ..... . . .....+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 229 ~~~-~~~~~----~------~---~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 229 TDL-RDGII----S------D---IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp HHH-HTTCC----C------T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred HHh-hcccc----c------c---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 111 11111 0 1 11234678888999999999999999999999987543
No 164
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.9e-38 Score=336.73 Aligned_cols=243 Identities=21% Similarity=0.351 Sum_probs=194.6
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--------chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--------GGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLV 434 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 434 (672)
.+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++.++ +||||+++++++......++|
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 178 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEE
Confidence 378999999999999975 799999999864331 1145678999999999 799999999999999999999
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
|||+++|+|.+++... ..+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 179 ~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH----~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~ 249 (365)
T 2y7j_A 179 FDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLH----ANNIVHRDLKPENILLDDNMQIRLSDFGFSCH 249 (365)
T ss_dssp ECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEEEecCcccc
Confidence 9999999999999753 35899999999999999999999 78999999999999999999999999999976
Q ss_pred CCCC----CCCCCCcccCCCccccC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 515 APPS----TVPRSNGYRAPELSSSD----GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 515 ~~~~----~~~~t~~y~aPE~l~~~----~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
.... ...+|..|+|||++... ...++.++|||||||++|||++|+.||.... .......+
T Consensus 250 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~------------~~~~~~~i 317 (365)
T 2y7j_A 250 LEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR------------QILMLRMI 317 (365)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------------HHHHHHHH
T ss_pred cCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC------------HHHHHHHH
Confidence 6543 45678999999986532 3357889999999999999999999996421 12222222
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
...... ...+.. . .....+.+++.+||+.||++|||+.|+++
T Consensus 318 ~~~~~~--~~~~~~---~---~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 318 MEGQYQ--FSSPEW---D---DRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHTCCC--CCHHHH---S---SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhCCCC--CCCccc---c---cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 221110 000000 0 11235778889999999999999999985
No 165
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.9e-39 Score=335.06 Aligned_cols=252 Identities=25% Similarity=0.335 Sum_probs=199.1
Q ss_pred HhcccCcCCeEEEEEEEE------cCCcEEEEEEcccCCc-chHHHHHHHHHHHcCC-CCCceeeeEEEEEcCC-eEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVL------DDGSVVAVKRLKDASI-GGKREFEQHMEVLGRL-RHPNLVGLKAYYFARE-EKLLV 434 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-~~~lv 434 (672)
+.+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|++++.++ +||||+++++++...+ ..++|
T Consensus 31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv 110 (316)
T 2xir_A 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110 (316)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEE
Confidence 357899999999999984 3468999999976443 2456789999999999 7999999999987654 58999
Q ss_pred EeecCCCChhHHhhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc
Q 005880 435 SEYMPNGSLFWLLHGNRGP-----------GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN 503 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~ 503 (672)
|||+++|+|.+++...... ....+++..++.++.|+++||.||| +.+|+||||||+||+++.++.
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dikp~Nil~~~~~~ 186 (316)
T 2xir_A 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSEKNV 186 (316)
T ss_dssp EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGC
T ss_pred EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH----hCCcccccCccceEEECCCCC
Confidence 9999999999999865421 0223899999999999999999999 789999999999999999999
Q ss_pred EEEeccCCCccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCC
Q 005880 504 ARVSDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGG 575 (672)
Q Consensus 504 ~kl~DfG~a~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~ 575 (672)
+||+|||+++..... ...+|..|+|||++. +..++.++||||||+++|||+| |+.||.....
T Consensus 187 ~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-------- 256 (316)
T 2xir_A 187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-------- 256 (316)
T ss_dssp EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC--------
T ss_pred EEECCCccccccccCccceeccCCCcceeecCchhhc--cccccchhHHHHHHHHHHHHHhCCCCCCcccch--------
Confidence 999999999766433 233467899999765 4578999999999999999998 9999964321
Q ss_pred CCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 576 AVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
...+............ . ......+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 257 ----~~~~~~~~~~~~~~~~-------~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 257 ----DEEFCRRLKEGTRMRA-------P---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp ----SHHHHHHHHHTCCCCC-------C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----hHHHHHHhccCccCCC-------C---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1112222222111000 0 1122357888889999999999999999999999864
No 166
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.1e-38 Score=348.71 Aligned_cols=187 Identities=22% Similarity=0.306 Sum_probs=157.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccC--CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcC------CeEEEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA--SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR------EEKLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ 435 (672)
.+.||+|+||.||+|+.. +|+.||||++... .....+++.+|+++++.++||||+++++++... ...++||
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 146 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEE
Confidence 478999999999999954 6899999999754 233467788999999999999999999999654 3579999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+++ +|.+.+.. .+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 147 E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH----~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 147 ELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp ECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred eCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 99976 57666642 3899999999999999999999 789999999999999999999999999999876
Q ss_pred CCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 516 PPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 516 ~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
... ...+|..|+|||++. +..++.++|||||||++|||++|+.||.+.
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 215 GTSFMMTPYVVTRYYRAPEVIL--GMGYKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp --CCCC----CCCTTCCHHHHT--TCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCcccCCCcccccccCHHHHc--CCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 543 456799999999875 457899999999999999999999999643
No 167
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=337.84 Aligned_cols=246 Identities=21% Similarity=0.286 Sum_probs=186.5
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC------eEEEEE
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE------EKLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ 435 (672)
.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 109 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEE
Confidence 47899999999999996 469999999996532 224567899999999999999999999997653 459999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+ +++|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 110 e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 110 PFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIH----AAGIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp ECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH----HCCccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 999 88999999753 3899999999999999999999 789999999999999999999999999999876
Q ss_pred CCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc-
Q 005880 516 PPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT- 592 (672)
Q Consensus 516 ~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 592 (672)
... ...+|..|+|||++.. ...++.++||||+||++|||++|+.||.... ..+.+..+......
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~------------~~~~l~~i~~~~g~~ 245 (367)
T 1cm8_A 179 DSEMTGYVVTRWYRAPEVILN-WMRYTQTVDIWSVGCIMAEMITGKTLFKGSD------------HLDQLKEIMKVTGTP 245 (367)
T ss_dssp CSSCCSSCSCGGGCCTHHHHT-TTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS------------HHHHHHHHHHHHCCC
T ss_pred ccccCcCcCCCCcCCHHHHhC-CCCCChhhhHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHHhcCCC
Confidence 543 4567899999998653 2578999999999999999999999996432 22222222111000
Q ss_pred -----------------c---cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 593 -----------------A---EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 593 -----------------~---~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
. ........ .........+.+++.+||..||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 246 PAEFVQRLQSDEAKNYMKGLPELEKKDFA--SILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CHHHHHTCSCHHHHHHHHHSCCCCCCCGG--GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CHHHHHHhhhHHHHHHHHhCCCCCCCCHH--HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0 00000000 000112345778888999999999999999987
No 168
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.1e-39 Score=334.54 Aligned_cols=250 Identities=20% Similarity=0.260 Sum_probs=187.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc-hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG-GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|+.. +|+.||||+++..... ....+.+|++++++++||||+++++++.+++..++||||++ |+
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 85 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KD 85 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EE
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cC
Confidence 478999999999999965 7899999998754321 12245679999999999999999999999999999999997 59
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 86 LKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCH----RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH----HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 999887653 45899999999999999999999 789999999999999999999999999999765432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh------c
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE------W 591 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 591 (672)
...+|..|+|||++.. ...++.++|||||||++|||++|+.||.... ..+....+.+.. .
T Consensus 158 ~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~~l~~g~~pf~~~~------------~~~~~~~i~~~~~~~~~~~ 224 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLG-STDYSTQIDMWGVGCIFYEMATGRPLFPGST------------VEEQLHFIFRILGTPTEET 224 (324)
T ss_dssp -----CGGGCCHHHHTT-CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------------HHHHHHHHHHHHCCCCTTT
T ss_pred ccccCcccccChhhhcC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHHHhCCCChHh
Confidence 3456889999997643 3568999999999999999999999996532 111111111100 0
Q ss_pred cccccchh------h--ccccC----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 TAEVFDLE------L--MRYKD----IEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 ~~~~~d~~------~--~~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
........ . ..... .......+.+++.+||+.||++|||+.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 225 WPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp STTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred chhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000000 0 00000 0011245678899999999999999999986
No 169
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=336.09 Aligned_cols=233 Identities=20% Similarity=0.272 Sum_probs=190.6
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcc--------hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEE
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIG--------GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 435 (672)
.+.||+|+||.||+|+. .+|+.||||+++..... ....+.+|++++++++||||+++++++.+.+..++||
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~ 108 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence 47899999999999995 46899999998754321 2346788999999999999999999999999999999
Q ss_pred eecCCC-ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 436 EYMPNG-SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 436 e~~~~g-~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
||+.+| +|.+++.... .+++..+..|+.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 109 e~~~~g~~l~~~~~~~~-----~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 109 EKHGSGLDLFAFIDRHP-----RLDEPLASYIFRQLVSAVGYLR----LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp ECCTTSCBHHHHHHTCC-----CCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EeCCCCccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH----hCCeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 999777 9999997543 4999999999999999999999 78999999999999999999999999999987
Q ss_pred CCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 515 APPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 515 ~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
.... ...+|..|+|||++.. ....+.++|||||||++|||++|+.||......
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------------- 236 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMG-NPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------------------- 236 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTT-CCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------------------
T ss_pred CCCCCceeccCCCccccChhhhcC-CCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----------------------
Confidence 6544 3457899999997653 233488999999999999999999999632110
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
.......... ....+.+++.+||+.||++|||+.|+++.
T Consensus 237 -----~~~~~~~~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 -----VEAAIHPPYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -----TTTCCCCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -----HhhccCCCcc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000001111 12357788889999999999999999863
No 170
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.8e-39 Score=345.95 Aligned_cols=244 Identities=23% Similarity=0.314 Sum_probs=184.2
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--------chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--------GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLV 434 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 434 (672)
+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++. .+..++|
T Consensus 139 ~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv 217 (419)
T 3i6u_A 139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIV 217 (419)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEE
T ss_pred EEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEE
Confidence 3578999999999999964 689999999864321 11235889999999999999999999975 4568999
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC---CcEEEeccCC
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT---GNARVSDFGL 511 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~---~~~kl~DfG~ 511 (672)
|||+++|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+|||++.+ +.+||+|||+
T Consensus 218 ~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH----~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 218 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLH----ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp EECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred EEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEecCCCcceEEEeeccc
Confidence 9999999999988654 35899999999999999999999 7899999999999999754 4599999999
Q ss_pred CccCCCC----CCCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 512 SIFAPPS----TVPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 512 a~~~~~~----~~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
++..... ...+|..|+|||++.. ....++.++|||||||++|||++|+.||....... .+...
T Consensus 289 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--------~~~~~---- 356 (419)
T 3i6u_A 289 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--------SLKDQ---- 356 (419)
T ss_dssp TTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--------CHHHH----
T ss_pred ceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--------HHHHH----
Confidence 9876543 4567899999998743 23567889999999999999999999997543211 11111
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....... +.+.. . ......+.+++.+||+.||++|||+.|+++
T Consensus 357 i~~~~~~--~~~~~--~---~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 357 ITSGKYN--FIPEV--W---AEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHTTCCC--CCHHH--H---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhcCCCC--CCchh--h---cccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1111100 00000 0 112345788889999999999999999975
No 171
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.4e-38 Score=324.22 Aligned_cols=242 Identities=22% Similarity=0.309 Sum_probs=193.3
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||++++
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (276)
T 2yex_A 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90 (276)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCC
Confidence 3478999999999999965 68999999986433 334678999999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC----
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP---- 517 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~---- 517 (672)
+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 999998643 35899999999999999999999 78999999999999999999999999999975432
Q ss_pred ---CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 518 ---STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 518 ---~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
....++..|+|||++.. ...++.++||||||+++|||++|+.||....... .. .........
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----------~~-~~~~~~~~~--- 226 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKR-REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC----------QE-YSDWKEKKT--- 226 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTC-SSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS----------HH-HHHHHTTCT---
T ss_pred hcccCCccccCccChHHHhc-CCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH----------HH-HHHhhhccc---
Confidence 24567889999997643 2334789999999999999999999997543211 11 111111100
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
... ........+.+++.+||+.||++|||+.|+++
T Consensus 227 ~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 227 YLN-------PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TST-------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccC-------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 000 00112235678888999999999999999864
No 172
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.7e-38 Score=349.39 Aligned_cols=241 Identities=22% Similarity=0.330 Sum_probs=191.7
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
..+.||+|+||.||+|+.. ++..||||+++... ......+.+|+++++.++||||+++++++.+....++||||+++
T Consensus 41 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 120 (494)
T 3lij_A 41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG 120 (494)
T ss_dssp EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 3578999999999999965 68999999997543 23467889999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC---CCcEEEeccCCCccCCC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK---TGNARVSDFGLSIFAPP 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~---~~~~kl~DfG~a~~~~~ 517 (672)
|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++. ++.+||+|||+++....
T Consensus 121 g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 121 GELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLH----KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999988654 34899999999999999999999 789999999999999976 45599999999976654
Q ss_pred C----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 518 S----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 518 ~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
. ...+|+.|+|||++. ..++.++||||+||++|+|++|+.||... ...+....+.......
T Consensus 192 ~~~~~~~~gt~~y~aPE~l~---~~~~~~~DiwslG~il~~ll~g~~pf~~~------------~~~~~~~~i~~~~~~~ 256 (494)
T 3lij_A 192 QKKMKERLGTAYYIAPEVLR---KKYDEKCDVWSIGVILFILLAGYPPFGGQ------------TDQEILRKVEKGKYTF 256 (494)
T ss_dssp TBCBCCCCSCTTTCCHHHHT---TCBCTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHTCCCC
T ss_pred CccccccCCCcCeeCHHHHc---ccCCCchhHHHHHHHHHHHHhCCCCCCCC------------CHHHHHHHHHhCCCCC
Confidence 3 456899999999864 46899999999999999999999999643 2233333333322110
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..+ .... ....+.+++.+||+.||++|||+.|+++
T Consensus 257 --~~~---~~~~---~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 257 --DSP---EWKN---VSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp --CSG---GGTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --Cch---hccc---CCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 000 0111 2235778888999999999999999985
No 173
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.9e-38 Score=323.45 Aligned_cols=243 Identities=26% Similarity=0.401 Sum_probs=197.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 98 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR 98 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCC
Confidence 478999999999999965 57899999986432 12356789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 99 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 99 GELYKELQKHG-----RFDEQRSATFMEELADALHYCH----ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp EEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 99999997542 4899999999999999999999 889999999999999999999999999998765432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||.... .............
T Consensus 170 ~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~~~~~~~~~~------ 229 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIE--GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS------------HTETHRRIVNVDL------ 229 (284)
T ss_dssp CCCCSCGGGCCHHHHT--TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS------------HHHHHHHHHTTCC------
T ss_pred ccccCCCCcCCHHHhc--cCCCCcccchhhHHHHHHHHHHCCCCCCCCC------------HhHHHHHHhcccc------
Confidence 456788999999764 4578899999999999999999999996431 1222222221110
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHHHHh
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK--LIEELR 642 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~--~L~~i~ 642 (672)
..... ....+.+++.+||+.||.+|||+.|+++ .++...
T Consensus 230 ---~~~~~---~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~ 270 (284)
T 2vgo_A 230 ---KFPPF---LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270 (284)
T ss_dssp ---CCCTT---SCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred ---CCCCc---CCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence 00111 1235678888999999999999999986 444443
No 174
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=8.1e-40 Score=349.07 Aligned_cols=243 Identities=15% Similarity=0.202 Sum_probs=185.3
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccC---CcchHHHHHHHH---HHHcCCCCCceeeeE-------EEEEcCCe
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDA---SIGGKREFEQHM---EVLGRLRHPNLVGLK-------AYYFAREE 430 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~~~~~~~~ 430 (672)
.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+ +++++++||||++++ +++.+++.
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 47899999999999995 57999999999732 333567899999 556666899999998 77665532
Q ss_pred -----------------EEEEEeecCCCChhHHhhcCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCC
Q 005880 431 -----------------KLLVSEYMPNGSLFWLLHGNRG--PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNI 491 (672)
Q Consensus 431 -----------------~~lv~e~~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dl 491 (672)
.++||||+ +|+|.+++..... .....+++..++.|+.|+++||+||| +.+|+||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivHrDi 232 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH----HYGLVHTYL 232 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH----HTTEECSCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH----hCCeecCCC
Confidence 78999999 6899999975321 11234557899999999999999999 789999999
Q ss_pred CCCCEEeCCCCcEEEeccCCCccCCCC--CCCCCCcccCCCccccC---------CCCCCchhHHHHHHHHHHHHHhCCC
Q 005880 492 KSTNVLLDKTGNARVSDFGLSIFAPPS--TVPRSNGYRAPELSSSD---------GRKQSQKSDVYSFGVLLLELLTGKC 560 (672)
Q Consensus 492 kp~NIll~~~~~~kl~DfG~a~~~~~~--~~~~t~~y~aPE~l~~~---------~~~~~~~~DV~S~Gvvl~el~tg~~ 560 (672)
||+|||++.++.+||+|||+++..... ...+ ..|+|||++... ...++.++|||||||++|||++|+.
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~ 311 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADL 311 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred CHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCC
Confidence 999999999999999999999865543 4556 899999977532 0168999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HH
Q 005880 561 PSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK--LI 638 (672)
Q Consensus 561 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~--~L 638 (672)
||........ ...+. ...... ...+.+++.+||+.||++|||+.|+++ .+
T Consensus 312 Pf~~~~~~~~---------------------~~~~~----~~~~~~---~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f 363 (377)
T 3byv_A 312 PITKDAALGG---------------------SEWIF----RSCKNI---PQPVRALLEGFLRYPKEDRLLPLQAMETPEY 363 (377)
T ss_dssp CC------CC---------------------SGGGG----SSCCCC---CHHHHHHHHHHTCSSGGGCCCHHHHHTSHHH
T ss_pred CCcccccccc---------------------hhhhh----hhccCC---CHHHHHHHHHHcCCCchhCCCHHHHhhChHH
Confidence 9965432210 00000 001111 235778888999999999999999986 44
Q ss_pred HHH
Q 005880 639 EEL 641 (672)
Q Consensus 639 ~~i 641 (672)
+++
T Consensus 364 ~~~ 366 (377)
T 3byv_A 364 EQL 366 (377)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 175
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=8.9e-39 Score=330.17 Aligned_cols=243 Identities=22% Similarity=0.358 Sum_probs=191.3
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 103 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 103 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEH
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcH
Confidence 478999999999999976 5899999999876666678899999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC-----CCC
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA-----PPS 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~-----~~~ 518 (672)
.+++.... ..+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||++... ...
T Consensus 104 ~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (302)
T 2j7t_A 104 DAIMLELD----RGLTEPQIQVVCRQMLEALNFLH----SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD 175 (302)
T ss_dssp HHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred HHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHh----cCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence 99987532 35899999999999999999999 789999999999999999999999999987432 123
Q ss_pred CCCCCCcccCCCcccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 TVPRSNGYRAPELSSS---DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~---~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++.. .+..++.++||||||+++|||++|+.||... +.............. ..
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------------~~~~~~~~~~~~~~~-~~ 242 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL------------NPMRVLLKIAKSDPP-TL 242 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS------------CHHHHHHHHHHSCCC-CC
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC------------CHHHHHHHHhccCCc-cc
Confidence 4568899999997631 3467889999999999999999999999642 222222222222110 00
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .......+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 243 LT--------PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp SS--------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred CC--------ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00 0112235778888999999999999999864
No 176
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.7e-38 Score=326.81 Aligned_cols=238 Identities=21% Similarity=0.307 Sum_probs=194.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 99 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 99 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCC
Confidence 478999999999999965 58899999986532 23456789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++... ..+++.+++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 100 ~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 100 RSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH----RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp CBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 9999998754 35899999999999999999999 789999999999999999999999999999765422
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||... ...+..........
T Consensus 171 ~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~~l~~g~~p~~~~------------~~~~~~~~~~~~~~---- 232 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLS--KKGHSFEVDVWSIGCIMYTLLVGKPPFETS------------CLKETYLRIKKNEY---- 232 (294)
T ss_dssp CBCCCCSCCSSCCHHHHT--TSCBCTHHHHHHHHHHHHHHHHSSCTTCCS------------SHHHHHHHHHTTCC----
T ss_pred ccccccCCCCcCCcchhc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCC------------CHHHHHHHHhhccC----
Confidence 345788999999764 456889999999999999999999999643 22222222222110
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
..... ....+.+++.+||+.||++|||+.|+++.
T Consensus 233 -----~~~~~---~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 233 -----SIPKH---INPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -----CCCTT---SCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -----CCccc---cCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00111 12357788889999999999999999873
No 177
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.8e-39 Score=354.23 Aligned_cols=243 Identities=23% Similarity=0.333 Sum_probs=196.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~g 268 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 268 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence 368999999999999965 69999999996532 22456788999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
|+|.+++.... ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 269 g~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH----~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 269 GDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLH----RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp CBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH----HCCEeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 99999997543 245899999999999999999999 789999999999999999999999999999876543
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...||+.|+|||++. +..++.++|||||||++|||++|+.||...... .........+.... ..+
T Consensus 342 ~~~~~GT~~Y~APEvl~--~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~--------~~~~~i~~~i~~~~---~~~ 408 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVK--NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK--------IKREEVERLVKEVP---EEY 408 (576)
T ss_dssp EECCCSCGGGCCHHHHT--TCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC--------CCHHHHHHHHHHCC---CCC
T ss_pred ccccCCCccccCHHHHc--CCCCCccchHHHHHHHHHHHHhCCCCCcccccc--------hhHHHHHHHhhccc---ccC
Confidence 457899999999775 457899999999999999999999999754321 11112221111110 000
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-----NMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 636 (672)
.. .....+.+++.+||+.||++|| ++.||++
T Consensus 409 ------p~---~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 409 ------SE---RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ------CT---TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ------Cc---cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 01 1123577888899999999999 6788864
No 178
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.4e-38 Score=346.35 Aligned_cols=256 Identities=20% Similarity=0.247 Sum_probs=199.2
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCC-CceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRH-PNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.++||+|+||.||+|+. .+++.||||++.... ...++.+|++++..++| +++..+..++...+..++||||+ +++
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~s 88 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPS 88 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCC
Confidence 47899999999999995 568999999876543 23458899999999987 55666666777788899999999 999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe---CCCCcEEEeccCCCccCCCC-
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~~~- 518 (672)
|.+++.... ..+++.+++.|+.||+.||+||| +.+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 89 L~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH----~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (483)
T 3sv0_A 89 LEDLFNFCS----RKLSLKTVLMLADQMINRVEFVH----SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160 (483)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred HHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence 999997543 35999999999999999999999 7899999999999999 58899999999999765432
Q ss_pred -----------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 005880 519 -----------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVV 587 (672)
Q Consensus 519 -----------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||...... ...+.+..+.
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~---------~~~~~~~~i~ 229 (483)
T 3sv0_A 161 THQHIPYRENKNLTGTARYASVNTHL--GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG---------TKKQKYEKIS 229 (483)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHT--TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS---------SHHHHHHHHH
T ss_pred cccccccccccccCCCccccCHHHhc--CCCCChHHHHHHHHHHHHHHHhCCCCCccccch---------hHHHHHHHHh
Confidence 446788999999764 567899999999999999999999999754321 2222222222
Q ss_pred hhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCCCC
Q 005880 588 REEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPC 649 (672)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~ 649 (672)
.... ...+..-. .....++.+++..||+.||++||++.+|+++|+++......+.
T Consensus 230 ~~~~-~~~~~~l~------~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~ 284 (483)
T 3sv0_A 230 EKKV-ATSIEALC------RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQF 284 (483)
T ss_dssp HHHH-HSCHHHHH------TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred hccc-cccHHHHh------cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCc
Confidence 2211 11111000 0112467889999999999999999999999999866444443
No 179
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.4e-38 Score=322.51 Aligned_cols=238 Identities=24% Similarity=0.356 Sum_probs=187.5
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCC
Confidence 478999999999999976 78999999986432 22356789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 96 GELFDYICKHG-----RVEEMEARRLFQQILSAVDYCH----RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHH----HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred CcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 99999997542 4899999999999999999999 779999999999999999999999999999876543
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...++..|+|||++.. ....+.++||||||+++|||++|+.||... ..............
T Consensus 167 ~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~------------~~~~~~~~~~~~~~----- 228 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISG-RLYAGPEVDIWSCGVILYALLCGTLPFDDE------------HVPTLFKKIRGGVF----- 228 (276)
T ss_dssp ----------CCTGGGTT-SCCCHHHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHCCC-----
T ss_pred eecccCCccccCHHHHcC-CCCCCccchHHHHHHHHHHHHhCCCCCCCC------------cHHHHHHHhhcCcc-----
Confidence 3456889999997642 223468999999999999999999999632 22222222221110
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.... .....+.+++.+||+.||++|||+.|+++
T Consensus 229 ----~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 229 ----YIPE---YLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp ----CCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ----cCch---hcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0001 11235778888999999999999999987
No 180
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=346.59 Aligned_cols=194 Identities=22% Similarity=0.391 Sum_probs=152.9
Q ss_pred hcccCcCCeEEEEEEEEc---CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEc--CCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD---DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA--REEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 439 (672)
+++||+|+||.||+|+.. +++.||||++.... ....+.+|++++++++||||+++++++.. ....++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 468999999999999965 57899999997554 34578899999999999999999999964 668899999996
Q ss_pred CCChhHHhhcCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe----CCCCcEEEeccCC
Q 005880 440 NGSLFWLLHGNR----GPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL----DKTGNARVSDFGL 511 (672)
Q Consensus 440 ~g~L~~~l~~~~----~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll----~~~~~~kl~DfG~ 511 (672)
|+|.+++.... ......+++..++.|+.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||+
T Consensus 104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 178 (405)
T 3rgf_A 104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH----ANWVLHRDLKPANILVMGEGPERGRVKIADMGF 178 (405)
T ss_dssp -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH----hCCEeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence 58888775321 112235999999999999999999999 7899999999999999 6778999999999
Q ss_pred CccCCCC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 005880 512 SIFAPPS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDG 566 (672)
Q Consensus 512 a~~~~~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~ 566 (672)
++..... ...+|..|+|||++.. ...++.++|||||||++|||++|+.||....
T Consensus 179 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 179 ARLFNSPLKPLADLDPVVVTFWYRAPELLLG-ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp CC----------------CCCTTCCHHHHTT-CCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred ceecCCCCcccccCCCceecCcccCchhhcC-CCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 9865432 3567899999998753 2468999999999999999999999997654
No 181
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=7.5e-39 Score=335.11 Aligned_cols=249 Identities=22% Similarity=0.251 Sum_probs=184.9
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc--hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG--GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+++..++||||++ |
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-N 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-C
Confidence 478999999999999954 7899999999754332 34567899999999999999999999999999999999997 5
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC-----CCCcEEEeccCCCccCC
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD-----KTGNARVSDFGLSIFAP 516 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~-----~~~~~kl~DfG~a~~~~ 516 (672)
+|.+++.... .+++..+..|+.|+++||+||| +.+|+||||||+||+++ +++.+||+|||+++...
T Consensus 118 ~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 118 DLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCH----SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp EHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred CHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHH----hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 9999997653 4899999999999999999999 78999999999999994 55569999999997654
Q ss_pred CC-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc
Q 005880 517 PS-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW 591 (672)
Q Consensus 517 ~~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (672)
.. ...+|..|+|||++.. ...++.++|||||||++|||++|+.||.... ..+..........
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~------------~~~~~~~~~~~~~ 255 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLG-SRHYSTSVDIWSIACIWAEMLMKTPLFPGDS------------EIDQLFKIFEVLG 255 (329)
T ss_dssp -----------CCTTCCHHHHTT-CCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------------HHHHHHHHHHHHC
T ss_pred CcccccCCCcCCccccCHHHhcC-CCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC------------HHHHHHHHHHHhC
Confidence 22 3456889999998653 3458999999999999999999999996432 1122222211100
Q ss_pred ccc------c-----cchhhc--cccChHH-----HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 TAE------V-----FDLELM--RYKDIEE-----EMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 ~~~------~-----~d~~~~--~~~~~~~-----~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
... . ...... ....... ...++.+++.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 256 LPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000 0 000000 0000010 1245778999999999999999999974
No 182
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.6e-38 Score=347.78 Aligned_cols=242 Identities=24% Similarity=0.323 Sum_probs=196.2
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
+.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++.+....++||||+++
T Consensus 26 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 105 (486)
T 3mwu_A 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG 105 (486)
T ss_dssp EEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCC
Confidence 3578999999999999965 78999999986432 23567899999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC---CCCcEEEeccCCCccCCC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD---KTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~---~~~~~kl~DfG~a~~~~~ 517 (672)
|+|.+.+... ..+++..+..++.|+++||.||| +.+|+||||||+||+++ .++.+||+|||+++....
T Consensus 106 ~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 106 GELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH----KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999988654 34899999999999999999999 78999999999999995 456799999999986654
Q ss_pred C----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 518 S----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 518 ~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
. ...+|+.|+|||++. ..++.++||||+||++|+|++|+.||... ...+....+.......
T Consensus 177 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~il~~ll~g~~pf~~~------------~~~~~~~~i~~~~~~~ 241 (486)
T 3mwu_A 177 NTKMKDRIGTAYYIAPEVLR---GTYDEKCDVWSAGVILYILLSGTPPFYGK------------NEYDILKRVETGKYAF 241 (486)
T ss_dssp C----CCTTGGGGCCGGGGG---SCCCHHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHTCCCS
T ss_pred CCccCCCcCCCCCCCHHHhC---CCCCchhhHHHHHHHHHHHHhCCCCCCCC------------CHHHHHHHHHhCCCCC
Confidence 3 456889999999874 35899999999999999999999999643 2223333333222111
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
. .... ......+.+++.+||+.||++|||+.|+++.
T Consensus 242 ~-----~~~~---~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 242 D-----LPQW---RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp C-----SGGG---GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred C-----Cccc---CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 0011 1122357788889999999999999999863
No 183
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.6e-38 Score=332.27 Aligned_cols=242 Identities=20% Similarity=0.317 Sum_probs=192.4
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.||+|+||.||+|+.. +|+.||||+++... ......+.+|+.++.++ +||||+++++++.+.+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 67999999999999965 68999999987533 23467899999999999 4699999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC---CCcEEEeccCCCccCCCC
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK---TGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~---~~~~kl~DfG~a~~~~~~ 518 (672)
+|.+++.... ...+++.+++.++.|+++||+||| +.+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 115 ~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH----~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 115 EIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLH----QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp EGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred cHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH----HCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 9999986543 245999999999999999999999 789999999999999997 789999999999876543
Q ss_pred ----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 ----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||.... ..+..........
T Consensus 188 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------------~~~~~~~i~~~~~--- 250 (327)
T 3lm5_A 188 CELREIMGTPEYLAPEILN--YDPITTATDMWNIGIIAYMLLTHTSPFVGED------------NQETYLNISQVNV--- 250 (327)
T ss_dssp ------CCCGGGCCHHHHT--TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------------HHHHHHHHHHTCC---
T ss_pred cccccccCCcCccCCeeec--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------------chHHHHHHHhccc---
Confidence 456889999999764 5678999999999999999999999996432 1222222211110
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+...... ......+.+++.+||+.||++|||+.|+++
T Consensus 251 --~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 251 --DYSEETF---SSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp --CCCTTTT---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --ccCchhh---cccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 0000001 112345778888999999999999999974
No 184
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.5e-38 Score=333.64 Aligned_cols=237 Identities=21% Similarity=0.314 Sum_probs=194.7
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 125 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 125 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCC
Confidence 478999999999999965 57899999986532 23456789999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++... ..+++.+++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 126 ~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 126 RSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH----RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp CBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 9999998754 34899999999999999999999 789999999999999999999999999999765422
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||... ...+..........
T Consensus 197 ~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~------------~~~~~~~~~~~~~~---- 258 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLS--KKGHSFEVDVWSIGCIMYTLLVGKPPFETS------------CLKETYLRIKKNEY---- 258 (335)
T ss_dssp CBCCCCSCCSSCCHHHHH--TSCBCTHHHHHHHHHHHHHHHHSSCTTCCS------------SHHHHHHHHHHTCC----
T ss_pred cccccCCCccccCHHHhc--cCCCCchhhHHHHHHHHHHHHHCcCCCCCC------------CHHHHHHHHhcCCC----
Confidence 355788999999765 456789999999999999999999999642 22222222222111
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... ....+.+++.+||+.||++|||+.|+++
T Consensus 259 -----~~~~~---~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 259 -----SIPKH---INPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -----CCCTT---SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -----CCCcc---CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00111 1234678888999999999999999987
No 185
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.7e-38 Score=349.19 Aligned_cols=240 Identities=24% Similarity=0.359 Sum_probs=192.6
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-------------chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCe
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-------------GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREE 430 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 430 (672)
.+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.+...
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 120 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 478999999999999965 589999999875332 235678999999999999999999999999999
Q ss_pred EEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC---cEEEe
Q 005880 431 KLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG---NARVS 507 (672)
Q Consensus 431 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~---~~kl~ 507 (672)
.++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+
T Consensus 121 ~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 121 FYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLH----KHNIVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCcHHHEEEecCCCCccEEEE
Confidence 99999999999999998754 34899999999999999999999 78999999999999998775 69999
Q ss_pred ccCCCccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHH
Q 005880 508 DFGLSIFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWV 583 (672)
Q Consensus 508 DfG~a~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 583 (672)
|||+++..... ...+|+.|+|||++. ..++.++||||+||++|+|++|+.||... ...+.+
T Consensus 192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~il~~ll~g~~pf~~~------------~~~~~~ 256 (504)
T 3q5i_A 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLK---KKYNEKCDVWSCGVIMYILLCGYPPFGGQ------------NDQDII 256 (504)
T ss_dssp CCTTCEECCTTSCBCCCCSCTTTCCHHHHT---TCBCTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHH
T ss_pred ECCCCEEcCCCCccccccCCcCCCCHHHhc---cCCCchHHHHHHHHHHHHHHhCCCCCCCC------------CHHHHH
Confidence 99999876543 456899999999864 46899999999999999999999999643 223333
Q ss_pred HHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..+....... +.. .... ....+.+++.+||+.||.+|||+.|+++
T Consensus 257 ~~i~~~~~~~---~~~--~~~~---~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 257 KKVEKGKYYF---DFN--DWKN---ISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHHCCCCC---CHH--HHTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHcCCCCC---Ccc--ccCC---CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 3333222110 100 0011 1245778888999999999999999985
No 186
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=326.67 Aligned_cols=250 Identities=23% Similarity=0.265 Sum_probs=189.0
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC-----cchHHHHHHHHHHHcCC---CCCceeeeEEEEEcCC-----e
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS-----IGGKREFEQHMEVLGRL---RHPNLVGLKAYYFARE-----E 430 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~-----~ 430 (672)
.+.||+|+||.||+|+. .+|+.||||+++... ......+.+|+++++++ +||||+++++++.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 47899999999999995 578999999986322 11235677788777766 4999999999998755 4
Q ss_pred EEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 431 KLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 431 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
.++||||++ |+|.+++..... ..+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 165 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAPP---PGLPAETIKDLMRQFLRGLDFLH----ANCIVHRDLKPENILVTSGGTVKLADFG 165 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCCT---TCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCTTTEEECTTSCEEECSCS
T ss_pred EEEEehhhh-cCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEcCCCCEEEeeCc
Confidence 789999996 699999986542 34899999999999999999999 7899999999999999999999999999
Q ss_pred CCccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 511 LSIFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 511 ~a~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
+++..... ...+|..|+|||++. +..++.++|||||||++|||++|+.||.... ..+....+
T Consensus 166 ~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~~l~~g~~pf~~~~------------~~~~~~~i 231 (308)
T 3g33_A 166 LARIYSYQMALTPVVVTLWYRAPEVLL--QSTYATPVDMWSVGCIFAEMFRRKPLFCGNS------------EADQLGKI 231 (308)
T ss_dssp CTTTSTTCCCSGGGGCCCSSCCHHHHH--TSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS------------HHHHHHHH
T ss_pred cccccCCCcccCCccccccccCchHHc--CCCCCchHHHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHH
Confidence 99866543 345788999999765 4578999999999999999999999996432 12222222
Q ss_pred Hhhhcc-------cccc--chhhc--cccCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 587 VREEWT-------AEVF--DLELM--RYKDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 587 ~~~~~~-------~~~~--d~~~~--~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
...... .... ..... ..... .+....+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 232 FDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 211000 0000 00000 00000 012245778889999999999999999974
No 187
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.2e-38 Score=327.57 Aligned_cols=238 Identities=26% Similarity=0.397 Sum_probs=194.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 106 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 106 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCc
Confidence 478999999999999954 68999999987543 3356789999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.. .++++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 107 L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 176 (303)
T 3a7i_A 107 ALDLLEP------GPLDETQIATILREILKGLDYLH----SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176 (303)
T ss_dssp HHHHHTT------SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB
T ss_pred HHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCChheEEECCCCCEEEeecccceecCcccccc
Confidence 9999964 34899999999999999999999 789999999999999999999999999999765432
Q ss_pred -CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccc
Q 005880 519 -TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFD 597 (672)
Q Consensus 519 -~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||... ............. ... +
T Consensus 177 ~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~------------~~~~~~~~~~~~~-~~~-~- 239 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIK--QSAYDSKADIWSLGITAIELARGEPPHSEL------------HPMKVLFLIPKNN-PPT-L- 239 (303)
T ss_dssp CCCCSCGGGCCHHHHT--TCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------------CHHHHHHHHHHSC-CCC-C-
T ss_pred CccCCCcCccCHHHHh--cCCCCchhhhHHHHHHHHHHccCCCCCCCc------------CHHHHHHHhhcCC-CCC-C-
Confidence 456788999999764 457889999999999999999999998632 1112221111111 000 0
Q ss_pred hhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
.. .....+.+++.+||+.||++|||+.|+++.
T Consensus 240 -----~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 240 -----EG---NYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp -----CS---SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred -----cc---ccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 01 112357788889999999999999999874
No 188
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=8.6e-39 Score=334.97 Aligned_cols=262 Identities=24% Similarity=0.319 Sum_probs=191.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc--hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG--GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 109 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcc
Confidence 478999999999999965 5899999998654332 3566889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 110 ~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 180 (331)
T 4aaa_A 110 ILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCH----SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180 (331)
T ss_dssp HHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred hHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH----HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence 998887643 34899999999999999999999 789999999999999999999999999999765432
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCChhHHHHHHHhhhccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMG---CGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 593 (672)
...++..|+|||++.. ...++.++|||||||++|||++|+.||......+... ...+.....+...........
T Consensus 181 ~~~~~~t~~y~aPE~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVG-DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ---CCCCCTTCCHHHHTT-CTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred cCCCcCCccccCcccccC-CCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 4567889999997642 3468999999999999999999999996532110000 000000000000000000000
Q ss_pred cccchhhccccCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMRYKDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....+........ ......+.+++.+||+.||++|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000111000000 012346888999999999999999999875
No 189
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-39 Score=337.06 Aligned_cols=252 Identities=25% Similarity=0.314 Sum_probs=191.1
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc-----hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG-----GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
..+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 14 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 93 (346)
T 1ua2_A 14 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 93 (346)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred EEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEc
Confidence 3478999999999999964 6899999999753221 134688999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++ +|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 94 ~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (346)
T 1ua2_A 94 MET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLH----QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164 (346)
T ss_dssp CSE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred CCC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHH----HCCEECCCCCHHHEEEcCCCCEEEEecccceeccC
Confidence 975 8988887543 45889999999999999999999 78999999999999999999999999999986643
Q ss_pred C-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 518 S-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 518 ~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
. ...+|..|+|||++.. ...++.++|||||||++|||++|.+||.... ..+.+..+......
T Consensus 165 ~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~ell~g~~~~~~~~------------~~~~~~~i~~~~~~ 231 (346)
T 1ua2_A 165 PNRAYTHQVVTRWYRAPELLFG-ARMYGVGVDMWAVGCILAELLLRVPFLPGDS------------DLDQLTRIFETLGT 231 (346)
T ss_dssp CCCCCCCSCCCCTTCCHHHHTT-CSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------------HHHHHHHHHHHHCC
T ss_pred CcccCCcccccccccCchHhhC-CCCCCchhhhHhHHHHHHHHHHCCCCCCCCC------------HHHHHHHHHHHcCC
Confidence 2 4567889999997642 3458899999999999999999999986432 12222222221100
Q ss_pred c--c-ccc----hhh---cccc--Ch----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 593 A--E-VFD----LEL---MRYK--DI----EEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 593 ~--~-~~d----~~~---~~~~--~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
. + ..+ +.. ...+ .. ......+.+++.+||+.||++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 232 PTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 0 000 000 0000 00 1122467889999999999999999999763
No 190
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.9e-39 Score=345.47 Aligned_cols=247 Identities=12% Similarity=0.024 Sum_probs=175.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHH---HHHcCCCCCceeeeE-------EEEEcC--
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHM---EVLGRLRHPNLVGLK-------AYYFAR-- 428 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~---~~l~~l~h~niv~l~-------~~~~~~-- 428 (672)
.+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|+ ++++. +||||++++ +++...
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~ 145 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQ 145 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTS
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCC
Confidence 478999999999999965 789999999986543 2345677784 55556 799988755 454433
Q ss_pred ---------------CeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHH------HHHHHHHHHHHHHHHhhCCCCCcE
Q 005880 429 ---------------EEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTR------LKIAAGAARGLAFIHFTCKSLKLT 487 (672)
Q Consensus 429 ---------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~~L~~LH~~~~~~~ii 487 (672)
...++||||++ |+|.+++.... ..+.+..+ ..++.|+++||+||| +.+|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH----~~~iv 216 (371)
T 3q60_A 146 PPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQ----SKGLV 216 (371)
T ss_dssp CSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHH----HTTEE
T ss_pred CCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHH----HCCCc
Confidence 33799999998 89999998642 23455566 788899999999999 78999
Q ss_pred ecCCCCCCEEeCCCCcEEEeccCCCccCCCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 488 H~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
||||||+|||++.++.+||+|||+++..... ...+|..|+|||++......++.++|||||||++|||+||+.||...
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 296 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV 296 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 9999999999999999999999999877554 34567899999987543367899999999999999999999999865
Q ss_pred CCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 566 GGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....... | ............. ..+........+.+++.+||+.||++|||+.|+++
T Consensus 297 ~~~~~~~---------~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 297 TPGIKGS---------W-----KRPSLRVPGTDSL-AFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CTTCTTC---------C-----CBCCTTSCCCCSC-CCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred Ccccccc---------h-----hhhhhhhcccccc-chhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 3321000 0 0000000000000 00000112345778888999999999999999974
No 191
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=7.9e-39 Score=336.19 Aligned_cols=241 Identities=20% Similarity=0.295 Sum_probs=189.7
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
..+.||+|+||.||+|... +|+.||||+++.... ...+|++++.++ +||||+++++++.+.+..++||||+++|
T Consensus 26 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg 101 (342)
T 2qr7_A 26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGG 101 (342)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCC
Confidence 3578999999999999965 689999999975432 245678888777 7999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC----CcEEEeccCCCccCCC
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT----GNARVSDFGLSIFAPP 517 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~----~~~kl~DfG~a~~~~~ 517 (672)
+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||++.++ +.+||+|||+++....
T Consensus 102 ~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH----~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 102 ELLDKILRQ-----KFFSEREASAVLFTITKTVEYLH----AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp BHHHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 999999754 35899999999999999999999 7899999999999998543 3599999999986543
Q ss_pred C-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 518 S-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 518 ~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
. ...+|..|+|||++. +..++.++|||||||++|||++|+.||..... ....+....+......
T Consensus 173 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---------~~~~~~~~~i~~~~~~ 241 (342)
T 2qr7_A 173 ENGLLMTPCYTANFVAPEVLE--RQGYDAACDIWSLGVLLYTMLTGYTPFANGPD---------DTPEEILARIGSGKFS 241 (342)
T ss_dssp TTCCBCCSSCCSSCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT---------SCHHHHHHHHHHCCCC
T ss_pred CCCceeccCCCccccCHHHhc--CCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc---------CCHHHHHHHHccCCcc
Confidence 2 456789999999775 34578899999999999999999999974321 1223333333222211
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....... .....+.+++.+||..||++|||+.|+++
T Consensus 242 -----~~~~~~~---~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 242 -----LSGGYWN---SVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp -----CCSTTTT---TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -----cCccccc---cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000011 12235678888999999999999999875
No 192
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.1e-38 Score=349.61 Aligned_cols=241 Identities=26% Similarity=0.363 Sum_probs=196.9
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 30 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 109 (484)
T 3nyv_A 30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 109 (484)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 3578999999999999965 78999999986432 2356789999999999999999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe---CCCCcEEEeccCCCccCC
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~ 516 (672)
+|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||+++...
T Consensus 110 ~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 110 GGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMH----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp SCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 99999998754 35899999999999999999999 7899999999999999 567899999999997765
Q ss_pred CC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc
Q 005880 517 PS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT 592 (672)
Q Consensus 517 ~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (672)
.. ...+|+.|+|||++. ..++.++||||+||++|||++|+.||... +..+.+..+......
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~il~~ll~g~~pf~~~------------~~~~~~~~i~~~~~~ 245 (484)
T 3nyv_A 181 ASKKMKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSGCPPFNGA------------NEYDILKKVEKGKYT 245 (484)
T ss_dssp CCCSHHHHTTGGGTCCHHHHH---TCCCTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHCCCC
T ss_pred cccccccCCCCccccCceeec---CCCCCcceeHHHHHHHHHHHHCCCCCCCC------------CHHHHHHHHHcCCCC
Confidence 44 346789999999874 36899999999999999999999999643 222333333322211
Q ss_pred ccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .... ......+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~-----~~~~---~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 246 FE-----LPQW---KKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CC-----SGGG---GGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC-----Cccc---ccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 11 0111 112235778888999999999999999985
No 193
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.5e-38 Score=351.11 Aligned_cols=239 Identities=23% Similarity=0.362 Sum_probs=193.8
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.||+|+||.||+|+.. +|+.||||++.+... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg 270 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG 270 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence 56999999999999975 699999999975332 23467889999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++..... ....+++..+..++.||+.||+||| +.+|+||||||+||+++.++++||+|||+++.....
T Consensus 271 ~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH----~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 271 DIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLH----QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp BHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred CHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHH----HcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 99999975432 2346999999999999999999999 789999999999999999999999999999866443
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
...||+.|+|||++. +..++.++|||||||++|||++|+.||...... .........+.....
T Consensus 346 ~~~~~GT~~Y~APE~l~--~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~--------~~~~~~~~~i~~~~~----- 410 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLL--GEEYDFSVDYFALGVTLYEMIAARGPFRARGEK--------VENKELKQRVLEQAV----- 410 (543)
T ss_dssp BCCCCSCTTTSCHHHHT--TCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC--------CCHHHHHHHHHHCCC-----
T ss_pred cccccCCccccChhhhc--CCCCChHHhcCcchHHHHHHHhCCCCCCCCccc--------hhHHHHHHHHhhccc-----
Confidence 347899999999775 467899999999999999999999999754321 122233333222211
Q ss_pred chhhccccChHHHHHHHHHHHHhccCCCCCCCCCH
Q 005880 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM 631 (672)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 631 (672)
..... ....+.+++.+||+.||++||++
T Consensus 411 ----~~p~~---~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 411 ----TYPDK---FSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp ----CCCTT---SCHHHHHHHHHHSCSSGGGSCCC
T ss_pred ----CCCcc---cCHHHHHHHHHhccCCHhHCCCC
Confidence 00111 22356778889999999999976
No 194
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=327.04 Aligned_cols=241 Identities=22% Similarity=0.338 Sum_probs=191.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC----cchHHHHHHHHHHHcCCCCCceeeeEEEEEc--CCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS----IGGKREFEQHMEVLGRLRHPNLVGLKAYYFA--REEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++||||+++++++.. ....++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 478999999999999964 68999999997532 2346789999999999999999999999854 4578999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++| |.+++.... ...+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH----~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 90 CVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLH----SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp CSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred ccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 9876 777776543 245899999999999999999999 78999999999999999999999999999976543
Q ss_pred C-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 518 S-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 518 ~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
. ...++..|+|||++......++.++||||||+++|||++|+.||... +..+....+....
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------------~~~~~~~~i~~~~ 229 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD------------NIYKLFENIGKGS 229 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS------------SHHHHHHHHHHCC
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc------------hHHHHHHHHhcCC
Confidence 2 44578899999987543344578999999999999999999999642 2222332222221
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
. .... .....+.+++.+||+.||++|||+.|+++.
T Consensus 230 ~---------~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 Y---------AIPG---DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp C---------CCCS---SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred C---------CCCC---ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1 0001 122357788889999999999999999863
No 195
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6e-39 Score=337.45 Aligned_cols=245 Identities=22% Similarity=0.337 Sum_probs=191.2
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc-chHHHHHHHHHH-HcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI-GGKREFEQHMEV-LGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|+. .+|+.||||+++.... ....++..|..+ ++.++||||+++++++.+++..++||||+++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 46899999999999996 5789999999975432 234556666665 7888999999999999999999999999975
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCC-CcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL-KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
+|.+++..... ....+++..++.++.|+++||+||| +. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 135 ~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH----~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 209 (340)
T 3an0_A 135 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLH----SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA 209 (340)
T ss_dssp EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHH----HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHH
T ss_pred cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHh----hcCCeecCCCCHHHEEECCCCCEEEeeCCCceecccccc
Confidence 99888864211 1246999999999999999999999 54 9999999999999999999999999999766543
Q ss_pred --CCCCCCcccCCCcccc--CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 --TVPRSNGYRAPELSSS--DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~--~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...+|..|+|||++.. ....++.++|||||||++|||+||+.||.... .....+......... .
T Consensus 210 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~-----------~~~~~~~~~~~~~~~-~ 277 (340)
T 3an0_A 210 KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-----------TPFQQLKQVVEEPSP-Q 277 (340)
T ss_dssp HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS-----------CHHHHHHHHHHSCCC-C
T ss_pred cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc-----------chHHHHHHHhcCCCC-C
Confidence 3568999999998642 24578999999999999999999999996421 111222222222110 0
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .......+.+++.+||+.||++|||+.|+++
T Consensus 278 ~~---------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 278 LP---------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CC---------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC---------cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 00 0112345788899999999999999999986
No 196
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.4e-38 Score=343.63 Aligned_cols=189 Identities=24% Similarity=0.332 Sum_probs=161.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC-----CeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR-----EEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e 436 (672)
.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++... ...++|||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 110 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE 110 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEe
Confidence 478999999999999964 68999999997532 23457889999999999999999999999766 57899999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|++ |+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 111 ~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH----~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 111 IAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIH----ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp CCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred cCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 996 6999999754 35999999999999999999999 7899999999999999999999999999998654
Q ss_pred C---------------------------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 517 P---------------------------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 517 ~---------------------------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
. ....+|..|+|||++.. ...++.++|||||||++|||++|..||..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~~~DiwSlG~il~ell~g~~p~~~ 254 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL-QENYTKSIDIWSTGCIFAELLNMLQSHIN 254 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTT-CSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhc-CCCCCcccccchHHHHHHHHHhccccccc
Confidence 2 24567889999997532 45789999999999999999997666653
No 197
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.2e-38 Score=325.80 Aligned_cols=239 Identities=24% Similarity=0.377 Sum_probs=190.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||.||+|... +|+.||||++.... ..+.+.+|++++.+++||||+++++++...+..++||||+++|+|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 478999999999999965 58999999997543 457789999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-----
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----- 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~----- 518 (672)
.+++.... ..+++..++.++.|+++||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (314)
T 3com_A 112 SDIIRLRN----KTLTEDEIATILQSTLKGLEYLH----FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 183 (314)
T ss_dssp HHHHHHHT----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence 99996432 35899999999999999999999 789999999999999999999999999999765432
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccch
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDL 598 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (672)
...++..|+|||++. +..++.++||||||+++|||++|+.||.... ........... ......
T Consensus 184 ~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------------~~~~~~~~~~~-~~~~~~-- 246 (314)
T 3com_A 184 TVIGTPFWMAPEVIQ--EIGYNCVADIWSLGITAIEMAEGKPPYADIH------------PMRAIFMIPTN-PPPTFR-- 246 (314)
T ss_dssp CCCSCGGGCCHHHHS--SSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC------------HHHHHHHHHHS-CCCCCS--
T ss_pred ccCCCCCccChhhcC--CCCCCccccHHHHHHHHHHHHhCCCCCCCCC------------hHHHHHHHhcC-CCcccC--
Confidence 456788999999764 4578899999999999999999999996421 11111111111 100000
Q ss_pred hhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 599 ELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 599 ~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
........+.+++.+||+.||++|||+.|+++
T Consensus 247 ------~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 247 ------KPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ------SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ------CcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 01112345778889999999999999999976
No 198
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.8e-38 Score=329.86 Aligned_cols=184 Identities=25% Similarity=0.375 Sum_probs=162.3
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCC-CCceeeeEEEEEc--CCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR-HPNLVGLKAYYFA--REEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++||||+++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 117 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 117 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCc
Confidence 47899999999999985 57899999999743 4578999999999997 9999999999987 5678999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCC-cEEEeccCCCccCCCC-
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG-NARVSDFGLSIFAPPS- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~-~~kl~DfG~a~~~~~~- 518 (672)
++|.+++. .+++..+..++.|+++||+||| +.+|+||||||+||+++.++ .+||+|||+++.....
T Consensus 118 ~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 118 TDFKQLYQ--------TLTDYDIRFYMYEILKALDYCH----SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp CCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred hhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 99999985 2789999999999999999999 78999999999999999776 8999999999865543
Q ss_pred ---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 005880 519 ---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564 (672)
Q Consensus 519 ---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~ 564 (672)
...++..|+|||++.. ...++.++|||||||++|||++|+.||..
T Consensus 186 ~~~~~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~il~~ll~g~~p~~~ 233 (330)
T 3nsz_A 186 EYNVRVASRYFKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFH 233 (330)
T ss_dssp CCCSCCSCGGGCCHHHHTT-CCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred ccccccccccccChhhhcC-CCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 4457888999997642 35789999999999999999999999954
No 199
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4.2e-38 Score=322.42 Aligned_cols=241 Identities=20% Similarity=0.281 Sum_probs=191.1
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
..+.||+|+||.||+|... +++.||||+++... .....++.+|+..+.++ +||||+++++++.+++..++||||++
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 94 (289)
T 1x8b_A 15 ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCN 94 (289)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred hhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecC
Confidence 3478999999999999975 79999999987532 33567788999999998 99999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC------------------
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT------------------ 501 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~------------------ 501 (672)
+|+|.+++..... ....+++..++.++.|+++||+||| +.+|+||||||+||+++.+
T Consensus 95 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1x8b_A 95 GGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIH----SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169 (289)
T ss_dssp TCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEC--------------------
T ss_pred CCcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHH----hCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence 9999999975421 1135899999999999999999999 7899999999999999844
Q ss_pred -CcEEEeccCCCccCCCC-CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCh
Q 005880 502 -GNARVSDFGLSIFAPPS-TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDL 579 (672)
Q Consensus 502 -~~~kl~DfG~a~~~~~~-~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~ 579 (672)
..+||+|||.+...... ...+|..|+|||++.. ...++.++|||||||++|||++|.+|+... .
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~Di~slG~il~~l~~~~~~~~~~------------~- 235 (289)
T 1x8b_A 170 KVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQE-NYTHLPKADIFALALTVVCAAGAEPLPRNG------------D- 235 (289)
T ss_dssp CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTT-CCTTHHHHHHHHHHHHHHHHTTCCCCCSSS------------H-
T ss_pred ceEEEEcccccccccCCccccCCCccccChhHhcC-CCCCCchhhHHHHHHHHHHHhcCCCCCcch------------h-
Confidence 47999999999876554 4568899999998652 346678999999999999999999876421 1
Q ss_pred hHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 580 PRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 580 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
. ..... ....... ... ....+.+++.+||+.||++|||+.|+++
T Consensus 236 -~-~~~~~-~~~~~~~-------~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 -Q-WHEIR-QGRLPRI-------PQV---LSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp -H-HHHHH-TTCCCCC-------SSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -H-HHHHH-cCCCCCC-------Ccc---cCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1 11111 1111110 011 1235778888999999999999999974
No 200
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=8.2e-39 Score=328.53 Aligned_cols=246 Identities=26% Similarity=0.375 Sum_probs=188.9
Q ss_pred hcccCcCCeEEEEEEEEc--CCc--EEEEEEcccCC---cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD--DGS--VVAVKRLKDAS---IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~--~g~--~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|++. +++ .||||+++... ....+.+.+|++++++++||||+++++++..+. .++||||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~ 101 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTEL 101 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEEC
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEec
Confidence 478999999999999853 333 68999987542 234678899999999999999999999987654 8899999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++|+|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 102 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 102 APLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLE----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp CTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred ccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHH----hCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 99999999997542 35899999999999999999999 78999999999999999999999999999977644
Q ss_pred C--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 518 S--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 518 ~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
. ...++..|+|||++. +..++.++||||||+++|||++ |+.||... +..+.......
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~~g~~p~~~~------------~~~~~~~~~~~ 239 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLK--TRTFSHASDTWMFGVTLWEMFTYGQEPWIGL------------NGSQILHKIDK 239 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHH--HCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC------------CHHHHHHHHHT
T ss_pred cccchhhhccCCCCceeeCchhhc--CCCCCchhhHHHHHHHHHHHHhCCCCCcccC------------CHHHHHHHHHc
Confidence 3 234566899999764 4567899999999999999999 99999643 22233333222
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
..... .........+.+++.+||+.||++|||+.++++.|+++..
T Consensus 240 ~~~~~----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 240 EGERL----------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp SCCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred cCCCC----------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 21110 0011223457888899999999999999999999998864
No 201
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=8.9e-39 Score=334.25 Aligned_cols=250 Identities=23% Similarity=0.323 Sum_probs=196.0
Q ss_pred hcccCcCCeEEEEEEEE------cCCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVL------DDGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|+. .+++.||||++.... .....++.+|+.++++++||||+++++++.+.+..++||||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMEL 114 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEec
Confidence 47899999999999984 247789999997543 33566889999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC---CCcEEEeccCCC
Q 005880 438 MPNGSLFWLLHGNRG--PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK---TGNARVSDFGLS 512 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~---~~~~kl~DfG~a 512 (672)
+++|+|.+++..... .....+++..++.++.|+++||.||| +.+|+||||||+||+++. +..+||+|||++
T Consensus 115 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH----~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~ 190 (327)
T 2yfx_A 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE----ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190 (327)
T ss_dssp CTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred CCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh----hCCeecCcCCHhHEEEecCCCcceEEECccccc
Confidence 999999999986542 12245899999999999999999999 789999999999999984 446999999998
Q ss_pred ccCCCC-------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHH
Q 005880 513 IFAPPS-------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQ 584 (672)
Q Consensus 513 ~~~~~~-------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 584 (672)
+..... ...++..|+|||++. +..++.++||||||+++|||+| |+.||.... ..+...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------------~~~~~~ 256 (327)
T 2yfx_A 191 RDIYRASYYRKGGCAMLPVKWMPPEAFM--EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS------------NQEVLE 256 (327)
T ss_dssp HHHHC------CCGGGSCGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------------HHHHHH
T ss_pred cccccccccccCCCcCCCcceeCHhHhc--CCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC------------HHHHHH
Confidence 643221 234577899999764 4578999999999999999998 999986431 222222
Q ss_pred HHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 585 SVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
........ . .. ......+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 257 ~~~~~~~~----~----~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 257 FVTSGGRM----D----PP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp HHHTTCCC----C----CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcCCCC----C----CC---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 22221110 0 01 1122357788899999999999999999999998864
No 202
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.3e-38 Score=345.60 Aligned_cols=183 Identities=23% Similarity=0.354 Sum_probs=147.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcC-----CeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR-----EEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e 436 (672)
.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++... ...|+|||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 137 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEC
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEe
Confidence 478999999999999954 68999999987532 23457889999999999999999999998543 56899999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|+ +|+|.+++... ..+++..+..++.||++||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 138 ~~-~~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH----~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 138 IA-DSDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVH----SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CC-SEEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred cc-ccchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHH----hCCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 98 57999999754 35999999999999999999999 7899999999999999999999999999998654
Q ss_pred CC--------------------------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhC
Q 005880 517 PS--------------------------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTG 558 (672)
Q Consensus 517 ~~--------------------------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg 558 (672)
.. ...+|..|+|||++. ....++.++|||||||++|||++|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL-LQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHT-TCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhh-CCCCCCcHhHHHHHHHHHHHHHHh
Confidence 21 235688899999753 245789999999999999999994
No 203
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=6.1e-38 Score=331.32 Aligned_cols=252 Identities=22% Similarity=0.281 Sum_probs=189.7
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEc--------CCeEEE
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFA--------REEKLL 433 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------~~~~~l 433 (672)
.+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++||||+++++++.. .+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 101 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEE
Confidence 47899999999999996 5789999999864432 235678899999999999999999999986 346899
Q ss_pred EEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 434 VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
||||+++ +|.+.+.... ..+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 102 v~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 102 VFDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIH----RNKILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp EEECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 9999975 7877776543 35999999999999999999999 7899999999999999999999999999997
Q ss_pred cCCC---------CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHH
Q 005880 514 FAPP---------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQ 584 (672)
Q Consensus 514 ~~~~---------~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 584 (672)
.... ....+|..|+|||++.. ...++.++|||||||++|||+||+.||...... .....+.
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---------~~~~~i~ 242 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLG-ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ---------HQLALIS 242 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTT-CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---------HHHHHHH
T ss_pred cccccccccccccCCcccccCccCchhhcC-CCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH---------HHHHHHH
Confidence 6542 13456888999997643 356799999999999999999999999753211 1111111
Q ss_pred HHHhhhccccccc------------hhhccccChHHH------HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 585 SVVREEWTAEVFD------------LELMRYKDIEEE------MVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 585 ~~~~~~~~~~~~d------------~~~~~~~~~~~~------~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... ...+... ..........+. ...+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 243 QLCGS-ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHHCC-CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhCC-CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 11100 0000000 000000111111 234778999999999999999999975
No 204
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=6.2e-38 Score=339.82 Aligned_cols=190 Identities=27% Similarity=0.377 Sum_probs=164.5
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCC------CCCceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRL------RHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|... +++.||||+++... ...+++.+|+++++.+ +|+||+++++++...+..++||||
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 180 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFEL 180 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEec
Confidence 478999999999999865 58999999997543 2456677888877766 578999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc--EEEeccCCCccC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN--ARVSDFGLSIFA 515 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~--~kl~DfG~a~~~ 515 (672)
+. ++|.+++..... ..+++..+..|+.|+++||+||| +.+|+||||||+|||++.++. +||+|||+++..
T Consensus 181 ~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~ 252 (429)
T 3kvw_A 181 LS-MNLYELIKKNKF---QGFSLPLVRKFAHSILQCLDALH----KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE 252 (429)
T ss_dssp CC-CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHH----HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred cC-CCHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence 95 699999986542 35899999999999999999999 779999999999999999887 999999999766
Q ss_pred CCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 516 PPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 516 ~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
... ...+|..|+|||++. +..++.++|||||||++|||+||++||...
T Consensus 253 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 253 HQRVYTYIQSRFYRAPEVIL--GARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp TCCCCSSCSCGGGCCHHHHH--TBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCcccccCCCCCccChHHHh--CCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 543 556889999999775 457899999999999999999999999754
No 205
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.1e-38 Score=325.29 Aligned_cols=245 Identities=22% Similarity=0.311 Sum_probs=179.8
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcc-h-HHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIG-G-KREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~-~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|+. .+|+.||||+++..... . .+.+.++...++.++||||+++++++.+++..++||||++ |
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-T 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-E
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-c
Confidence 47899999999999996 47899999999754322 2 2344455556888999999999999999999999999997 5
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCC-CcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL-KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
+|.+++..... ....+++..++.++.|+++||+||| +. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 ~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH----~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 165 (290)
T 3fme_A 91 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLH----SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA 165 (290)
T ss_dssp EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH----HHSCCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred chHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHh----hcCCeecCCCCHHHEEECCCCCEEEeecCCccccccccc
Confidence 88887754211 1245999999999999999999999 65 9999999999999999999999999999766443
Q ss_pred --CCCCCCcccCCCccc--cCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 --TVPRSNGYRAPELSS--SDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~--~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...+|..|+|||++. ..+..++.++|||||||++|||+||+.||.... ............... .
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~~-~ 233 (290)
T 3fme_A 166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-----------TPFQQLKQVVEEPSP-Q 233 (290)
T ss_dssp ----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS-----------CHHHHHHHHHHSCCC-C
T ss_pred ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC-----------chHHHHHHHhccCCC-C
Confidence 346789999999753 235678999999999999999999999996421 111122222222110 0
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
. . . ......+.+++.+||+.||++|||+.|+++
T Consensus 234 ~-----~-~---~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 L-----P-A---DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp C-----C-T---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred c-----c-c---ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0 0 0 112335788888999999999999999986
No 206
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=8.2e-39 Score=333.13 Aligned_cols=250 Identities=19% Similarity=0.311 Sum_probs=191.2
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|...+ .||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~ 115 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCc
Confidence 4789999999999999763 48999987432 2234567889999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC----
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---- 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 518 (672)
|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++ ++.+||+|||+++.....
T Consensus 116 L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH----~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 116 LYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLH----AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp HHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHH----HTTCCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH----hCCccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 999997543 45899999999999999999999 78999999999999998 679999999998654311
Q ss_pred ------CCCCCCcccCCCccccC-------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 005880 519 ------TVPRSNGYRAPELSSSD-------GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQS 585 (672)
Q Consensus 519 ------~~~~t~~y~aPE~l~~~-------~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 585 (672)
...++..|+|||++... ...++.++||||||+++|||++|+.||.... .......
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------------~~~~~~~ 254 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP------------AEAIIWQ 254 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC------------HHHHHHH
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHH
Confidence 23467889999987531 3457899999999999999999999996432 1222222
Q ss_pred HHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 005880 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVS 647 (672)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 647 (672)
.... ....... .. ....+.+++.+||+.||++|||+.|+++.|+++.+....
T Consensus 255 ~~~~-~~~~~~~------~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 255 MGTG-MKPNLSQ------IG---MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp HHTT-CCCCCCC------SS---CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred hccC-CCCCCCc------CC---CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 2111 1111100 01 122477888899999999999999999999998765443
No 207
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.3e-38 Score=335.91 Aligned_cols=248 Identities=21% Similarity=0.294 Sum_probs=174.9
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccC--CcchHHHHHHHHHHHcCCCCCceeeeEEEEEcC------CeEEEEE
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDA--SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR------EEKLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ 435 (672)
.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++... ...++|+
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~ 113 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEe
Confidence 47899999999999995 46899999999753 223457788999999999999999999998754 5679999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||+ +++|.+++.. ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 114 e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 114 HLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp ECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred ccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 999 7899998864 24899999999999999999999 789999999999999999999999999999876
Q ss_pred CCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc--
Q 005880 516 PPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW-- 591 (672)
Q Consensus 516 ~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 591 (672)
... ...+|..|+|||++.. ...++.++|||||||++|||++|+.||.... ....+..+.+...
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~------------~~~~l~~i~~~~g~p 249 (367)
T 2fst_X 183 ADEMTGYVATRWYRAPEIMLN-WMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------------HIDQLKLILRLVGTP 249 (367)
T ss_dssp --------CCCTTCCHHHHTT-CCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS------------HHHHHHHHHHHHCSC
T ss_pred cccCCCcCcCcCccChHHHcC-CcCCCchhhHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHHHhCCC
Confidence 543 4568899999998653 3578999999999999999999999996432 1222222211100
Q ss_pred ----cccccch-------hhcc--ccChH----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 ----TAEVFDL-------ELMR--YKDIE----EEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 ----~~~~~d~-------~~~~--~~~~~----~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
...+... .+.. ..... .....+.+++.+||..||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 250 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp CHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0000000 0000 00000 11245778889999999999999999975
No 208
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4e-38 Score=328.53 Aligned_cols=244 Identities=24% Similarity=0.319 Sum_probs=189.1
Q ss_pred HhcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--------chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--------GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLV 434 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 434 (672)
+.+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++..+. .++|
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv 92 (322)
T 2ycf_A 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIV 92 (322)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEE
T ss_pred EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEE
Confidence 3578999999999999965 589999999865321 12345889999999999999999999987654 8999
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc---EEEeccCC
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN---ARVSDFGL 511 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~---~kl~DfG~ 511 (672)
|||+++|+|.+++... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++. +||+|||+
T Consensus 93 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 93 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLH----ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp EECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred EecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 9999999999998754 35899999999999999999999 789999999999999987654 99999999
Q ss_pred CccCCCC----CCCCCCcccCCCcccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 005880 512 SIFAPPS----TVPRSNGYRAPELSSS-DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSV 586 (672)
Q Consensus 512 a~~~~~~----~~~~t~~y~aPE~l~~-~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (672)
++..... ...+|..|+|||++.. ....++.++|||||||++|||++|+.||...... ..+...+
T Consensus 164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~--- 232 (322)
T 2ycf_A 164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--------VSLKDQI--- 232 (322)
T ss_dssp CEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS--------SCHHHHH---
T ss_pred ceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH--------HHHHHHH---
Confidence 9876554 3357889999997642 3457889999999999999999999999754321 1121111
Q ss_pred HhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 587 VREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
...... ..+... ......+.+++.+||+.||++|||+.|+++
T Consensus 233 -~~~~~~--~~~~~~-----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 233 -TSGKYN--FIPEVW-----AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -HHTCCC--CCHHHH-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HhCccc--cCchhh-----hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 111100 000000 112345788889999999999999999984
No 209
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.8e-38 Score=324.04 Aligned_cols=243 Identities=22% Similarity=0.317 Sum_probs=194.9
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc---------chHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI---------GGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLL 433 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 433 (672)
.+.||+|+||.||+|... +|+.||||+++.... ...+.+.+|++++.+++ ||||+++++++...+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 478999999999999965 689999999864321 12456889999999995 9999999999999999999
Q ss_pred EEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 434 VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 434 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
||||+++|+|.+++... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 102 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcceEEEcCCCcEEEecccchh
Confidence 99999999999999754 35899999999999999999999 7899999999999999999999999999997
Q ss_pred cCCCC----CCCCCCcccCCCcccc----CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 005880 514 FAPPS----TVPRSNGYRAPELSSS----DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQS 585 (672)
Q Consensus 514 ~~~~~----~~~~t~~y~aPE~l~~----~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 585 (672)
..... ...++..|+|||++.. ....++.++||||||+++|||++|+.||... ........
T Consensus 173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~------------~~~~~~~~ 240 (298)
T 1phk_A 173 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR------------KQMLMLRM 240 (298)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHH
T ss_pred hcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc------------cHHHHHHH
Confidence 66543 3457889999997642 2456789999999999999999999999642 12222222
Q ss_pred HHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
........ .. +........+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~--~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 241 IMSGNYQF--GS------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHTCCCC--CT------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HhcCCccc--Cc------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 22221110 00 011122345788889999999999999999974
No 210
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=6.8e-39 Score=331.04 Aligned_cols=253 Identities=22% Similarity=0.364 Sum_probs=177.4
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|+. .+++.||||++.... ....+++.+|++++.+++||||+++++++...+..++||||+++|+
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 99 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 99 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCB
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCc
Confidence 47899999999999995 468999999987533 2345678899999999999999999999999999999999999999
Q ss_pred hhHHhhcC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC-
Q 005880 443 LFWLLHGN---RGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS- 518 (672)
Q Consensus 443 L~~~l~~~---~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~- 518 (672)
|.+++... .......+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 100 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 100 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH----KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp HHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred hHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH----hCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 99998641 1112345899999999999999999999 789999999999999999999999999998655321
Q ss_pred ---------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 519 ---------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 519 ---------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
...+|..|+|||++.. ...++.++||||||+++|||++|+.||..... ..........
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------------~~~~~~~~~~ 242 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVMEQ-VRGYDFKADIWSFGITAIELATGAAPYHKYPP------------MKVLMLTLQN 242 (303)
T ss_dssp ------------CCCTTCCHHHHHH-HHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCG------------GGHHHHHHTS
T ss_pred CccchhhhcccCCCccccCHHHhcc-ccCCCchhhHHHHHHHHHHHHhCCCCCccCch------------hhHHHHHhcc
Confidence 3457889999997642 24578999999999999999999999964321 1111111111
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
... .. ................+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~-~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 243 DPP-SL-ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp SCC-CT-TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCC-cc-ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 100 00 0000000000112235778888999999999999999974
No 211
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.2e-38 Score=334.13 Aligned_cols=252 Identities=17% Similarity=0.263 Sum_probs=194.2
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcch-----------------HHHHHHHHHHHcCCCCCceeeeEEEEEc
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGG-----------------KREFEQHMEVLGRLRHPNLVGLKAYYFA 427 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~l~~~~~~ 427 (672)
.+.||+|+||.||+|.. +|+.||||++....... .+.+.+|++++.+++||||+++++++.+
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 47899999999999999 89999999986432211 1789999999999999999999999999
Q ss_pred CCeEEEEEeecCCCChhHH------hhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CCcEecCCCCCCEEeCC
Q 005880 428 REEKLLVSEYMPNGSLFWL------LHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS-LKLTHGNIKSTNVLLDK 500 (672)
Q Consensus 428 ~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~~iiH~Dlkp~NIll~~ 500 (672)
.+..++||||+++|+|.++ +... ....+++..++.++.|+++||+||| + .+|+||||||+||+++.
T Consensus 115 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH----~~~~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 115 YDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIH----NEKNICHRDVKPSNILMDK 187 (348)
T ss_dssp SSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHH----HTSCEECCCCCGGGEEECT
T ss_pred CCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHh----ccCCEeecCCChHhEEEcC
Confidence 9999999999999999998 5432 1356999999999999999999999 6 89999999999999999
Q ss_pred CCcEEEeccCCCccCCCC---CCCCCCcccCCCccccCCCCCCc-hhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC
Q 005880 501 TGNARVSDFGLSIFAPPS---TVPRSNGYRAPELSSSDGRKQSQ-KSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGA 576 (672)
Q Consensus 501 ~~~~kl~DfG~a~~~~~~---~~~~t~~y~aPE~l~~~~~~~~~-~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~ 576 (672)
++.+||+|||++...... ...++..|+|||++... ..++. ++||||||+++|||++|+.||.....
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------- 257 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNE-SSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS--------- 257 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSC-CCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC---------
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCC-CCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc---------
Confidence 999999999999865443 55678899999976532 24555 99999999999999999999975422
Q ss_pred CChhHHHHHHHhhhcccccc----chhhcc---ccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 577 VDLPRWVQSVVREEWTAEVF----DLELMR---YKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~----d~~~~~---~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..+............... ...... ..........+.+++.+||+.||++|||+.|+++
T Consensus 258 --~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 258 --LVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp --SHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred --HHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 112222222111100000 000000 0000112346788899999999999999999975
No 212
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.1e-38 Score=338.16 Aligned_cols=255 Identities=20% Similarity=0.292 Sum_probs=192.2
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCC--------CCceeeeEEEEE----cCCeE
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR--------HPNLVGLKAYYF----AREEK 431 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~----~~~~~ 431 (672)
.+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|++++++++ |+||+++++++. .....
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~ 120 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 120 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceE
Confidence 47899999999999995 468999999997542 24577889999998885 788999999987 55678
Q ss_pred EEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCC-CcEecCCCCCCEEeCCCC--------
Q 005880 432 LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL-KLTHGNIKSTNVLLDKTG-------- 502 (672)
Q Consensus 432 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-~iiH~Dlkp~NIll~~~~-------- 502 (672)
++||||+ +++|.+.+.... ...+++..++.|+.|+++||+||| +. +|+||||||+|||++.++
T Consensus 121 ~lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH----~~~givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 121 CMVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLH----TKCRIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp EEEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHH----HTTCEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred EEEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHH----HhCCEecCCCCHHHeeEeccchhhhhhhh
Confidence 9999999 566666665432 245899999999999999999999 66 999999999999999775
Q ss_pred -----------------------------------------cEEEeccCCCccCCCC--CCCCCCcccCCCccccCCCCC
Q 005880 503 -----------------------------------------NARVSDFGLSIFAPPS--TVPRSNGYRAPELSSSDGRKQ 539 (672)
Q Consensus 503 -----------------------------------------~~kl~DfG~a~~~~~~--~~~~t~~y~aPE~l~~~~~~~ 539 (672)
.+||+|||+++..... ...+|..|+|||++. +..+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~--~~~~ 270 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLI--GSGY 270 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHH--TSCC
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhc--CCCC
Confidence 7999999999766543 456799999999775 4568
Q ss_pred CchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------hhccccccchh--------
Q 005880 540 SQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR------------EEWTAEVFDLE-------- 599 (672)
Q Consensus 540 ~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~d~~-------- 599 (672)
+.++|||||||++|||+||+.||....... ...-......... .......+...
T Consensus 271 ~~~~DiwslG~il~elltg~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 271 NTPADIWSTACMAFELATGDYLFEPHSGEE------YTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCCCCSS------SCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred CcHHHHHHHHHHHHHHhhCCCCCCCCcccc------cCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 999999999999999999999997654321 0001111111110 00000001000
Q ss_pred ----------hccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 600 ----------LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 600 ----------~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
........+....+.+++.+||+.||++|||+.|+++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0001122455677899999999999999999999974
No 213
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=8.3e-38 Score=322.40 Aligned_cols=251 Identities=23% Similarity=0.311 Sum_probs=191.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++..++..++||||++ |
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 86 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 86 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-C
Confidence 468999999999999965 689999999875432 234678899999999999999999999999999999999997 6
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC---
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 518 (672)
+|.+++..... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 87 ~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 87 DLKKFMDASAL---TGIPLPLIKSYLFQLLQGLAFCH----SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp EHHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred CHHHHHHhhhc---cCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 99999976532 35899999999999999999999 789999999999999999999999999998654322
Q ss_pred --CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc-cccc
Q 005880 519 --TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW-TAEV 595 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 595 (672)
...++..|+|||++.. ...++.++|||||||++|||+||+.||.... ..+......+... ..+.
T Consensus 160 ~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------------~~~~~~~~~~~~~~~~~~ 226 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLG-AKYYSTAVDIWSLGCIFAEMVTRRALFPGDS------------EIDQLFRIFRTLGTPDEV 226 (299)
T ss_dssp TTSCBCCCTTCCHHHHTT-CSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS------------HHHHHHHHHHHHCCCCTT
T ss_pred cCcccccccccCcHHhhc-cccCChHHHHHHHHHHHHHHHhCCCCCCCcc------------HHHHHHHHHHHhCCCchh
Confidence 3456889999997643 2347899999999999999999999996432 1112222221100 0000
Q ss_pred ----------cchhhcc--ccCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 596 ----------FDLELMR--YKDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 596 ----------~d~~~~~--~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+.+.... .... ......+.+++.+||+.||++|||+.|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 0000 012245778889999999999999999975
No 214
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.6e-38 Score=337.01 Aligned_cols=190 Identities=25% Similarity=0.398 Sum_probs=166.3
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
.+.||+|+||.||+|... +|+.||+|+++... ....+.+.+|++++++++||||+++++++.+++..++||||+++|+
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 117 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 117 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCC
Confidence 468999999999999965 68999999987543 3345789999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CCcEecCCCCCCEEeCCCCcEEEeccCCCccCC---CC
Q 005880 443 LFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS-LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP---PS 518 (672)
Q Consensus 443 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~---~~ 518 (672)
|.+++.... .+++..+..++.|+++||+||| + ++|+||||||+||+++.++.+||+|||++.... ..
T Consensus 118 L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh----~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (360)
T 3eqc_A 118 LDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLR----EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188 (360)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHH----HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH----HhCCEEcCCccHHHEEECCCCCEEEEECCCCccccccccc
Confidence 999997542 4899999999999999999999 5 389999999999999999999999999986432 23
Q ss_pred CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 519 ~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
...+|..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 189 ~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 189 SFVGTRSYMSPERLQ--GTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp --CCCCTTCCHHHHT--TCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred CCCCCCCeECHHHHc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 557899999999764 567899999999999999999999999653
No 215
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.9e-38 Score=333.47 Aligned_cols=250 Identities=19% Similarity=0.277 Sum_probs=185.0
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc-----------hHHHHHHHHHHHcCCCCCceeeeEEEEEcC-----
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG-----------GKREFEQHMEVLGRLRHPNLVGLKAYYFAR----- 428 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 428 (672)
.+.||+|+||.||+|...+|+.||||++...... ..+.+.+|++++++++||||+++++++...
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 4689999999999999888999999998643221 137899999999999999999999998643
Q ss_pred CeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEec
Q 005880 429 EEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSD 508 (672)
Q Consensus 429 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 508 (672)
...++||||++ |+|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 107 ~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVIHDQR----IVISPQHIQYFMYHILLGLHVLH----EAGVVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred ceEEEEEccCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH----HCcCEecCCChHHEEEcCCCCEEEEe
Confidence 35799999997 68888887543 46999999999999999999999 78999999999999999999999999
Q ss_pred cCCCccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHH
Q 005880 509 FGLSIFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQ 584 (672)
Q Consensus 509 fG~a~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 584 (672)
||+++..... ...+|..|+|||++.. ...++.++|||||||++|||++|+.||.... ......
T Consensus 178 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~~l~~g~~pf~~~~------------~~~~~~ 244 (362)
T 3pg1_A 178 FNLAREDTADANKTHYVTHRWYRAPELVMQ-FKGFTKLVDMWSAGCVMAEMFNRKALFRGST------------FYNQLN 244 (362)
T ss_dssp TTC---------------CGGGCCHHHHTT-CTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS------------HHHHHH
T ss_pred cCcccccccccccceecccceecCcHHhcC-CCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC------------HHHHHH
Confidence 9999754432 4457888999997653 2568999999999999999999999996432 122222
Q ss_pred HHHhhhccc--------------cccchhhcc--ccCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 585 SVVREEWTA--------------EVFDLELMR--YKDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 585 ~~~~~~~~~--------------~~~d~~~~~--~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
......... ..+...... .... ......+.+++.+||+.||++|||+.|+++
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 221110000 000000000 0000 111245788999999999999999999975
No 216
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.1e-38 Score=325.45 Aligned_cols=244 Identities=23% Similarity=0.290 Sum_probs=191.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEc--CCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFA--REEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+ ....++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 90 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCT
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCC
Confidence 478999999999999965 68999999997543 2345678999999999999999999998864 567899999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC-----cEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK-----LTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~-----iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
+|+|.+++..... ....+++..++.++.|+++||+||| +.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH----~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~ 165 (279)
T 2w5a_A 91 GGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECH----RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165 (279)
T ss_dssp TEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH----HHC------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred CCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHh----cccCCCCeeEEeccchhhEEEcCCCCEEEecCchhee
Confidence 9999999975421 2245899999999999999999999 445 99999999999999999999999999977
Q ss_pred CCCC-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 515 APPS-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 515 ~~~~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
.... ...++..|+|||++. +..++.++||||||+++|||++|+.||... ...+....+...
T Consensus 166 ~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~------------~~~~~~~~i~~~ 231 (279)
T 2w5a_A 166 LNHDTSFAKTFVGTPYYMSPEQMN--RMSYNEKSDIWSLGCLLYELCALMPPFTAF------------SQKELAGKIREG 231 (279)
T ss_dssp C---CHHHHHHHSCCTTCCHHHHH--CC-CCHHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHT
T ss_pred eccccccccccCCCccccChHHhc--cCCCCchhhHHHHHHHHHHHHHCCCCCccc------------CHHHHHHHHhhc
Confidence 6543 235788999999764 457899999999999999999999999643 122222222221
Q ss_pred hccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 005880 590 EWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638 (672)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 638 (672)
. ...+ . ......+.+++.+||+.||++|||+.||++.+
T Consensus 232 ~-~~~~-------~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 232 K-FRRI-------P---YRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp C-CCCC-------C---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred c-cccC-------C---cccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 1 1110 0 11223577888899999999999999998754
No 217
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4e-38 Score=336.72 Aligned_cols=248 Identities=24% Similarity=0.309 Sum_probs=184.6
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcC---------------
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR--------------- 428 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------------- 428 (672)
.+.||+|+||.||+|+. .+|+.||||++.... ....+|+++++.++||||+++++++...
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC---------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCcccccccccccccc
Confidence 47899999999999995 579999999986432 2234799999999999999999998543
Q ss_pred -----------------------CeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC
Q 005880 429 -----------------------EEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK 485 (672)
Q Consensus 429 -----------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~ 485 (672)
...++||||++ |+|.+.+..... ....+++..+..++.|+++||+||| +.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH----~~g 161 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIH----SLG 161 (383)
T ss_dssp ----------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH----TTT
T ss_pred cccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH----HCc
Confidence 34789999997 588777754211 1245999999999999999999999 889
Q ss_pred cEecCCCCCCEEeC-CCCcEEEeccCCCccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCC
Q 005880 486 LTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKC 560 (672)
Q Consensus 486 iiH~Dlkp~NIll~-~~~~~kl~DfG~a~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~ 560 (672)
|+||||||+||+++ .++.+||+|||+++..... ...+|..|+|||++.. ...++.++||||+||++|||++|+.
T Consensus 162 i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~ell~g~~ 240 (383)
T 3eb0_A 162 ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLG-ATEYTPSIDLWSIGCVFGELILGKP 240 (383)
T ss_dssp EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTT-CSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcC-CCCCCcchhhhhHHHHHHHHHhCCC
Confidence 99999999999998 6899999999999865433 4567889999997642 3458999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCChhHHHHHHHhhhc-------------cccccchhhccccCh-----HHHHHHHHHHHHhccC
Q 005880 561 PSVIDGGGAGMGCGGAVDLPRWVQSVVREEW-------------TAEVFDLELMRYKDI-----EEEMVGLLQVAMACTS 622 (672)
Q Consensus 561 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~d~~~~~~~~~-----~~~~~~l~~li~~Cl~ 622 (672)
||.... ..+.+..+..... ..+..-+... .... ......+.+++.+||+
T Consensus 241 pf~~~~------------~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~ 307 (383)
T 3eb0_A 241 LFSGET------------SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLK-AKDWRKILPEGTPSLAIDLLEQILR 307 (383)
T ss_dssp SSCCSS------------HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCC-CCCHHHHSCTTCCHHHHHHHHHHCC
T ss_pred CCCCCC------------hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccC-cccHHhhCCCCCCHHHHHHHHHHcc
Confidence 997532 1111222111000 0000000000 0000 1123457888999999
Q ss_pred CCCCCCCCHHHHHH
Q 005880 623 ASPDQRPNMSHVVK 636 (672)
Q Consensus 623 ~dP~~RPt~~evl~ 636 (672)
.||++|||+.|+++
T Consensus 308 ~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 308 YEPDLRINPYEAMA 321 (383)
T ss_dssp SSGGGSCCHHHHHT
T ss_pred CChhhCCCHHHHhc
Confidence 99999999999984
No 218
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-37 Score=330.51 Aligned_cols=251 Identities=22% Similarity=0.323 Sum_probs=190.4
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcC-----CeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAR-----EEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~ 437 (672)
.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++.+++||||+++++++... ...++||||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~ 111 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEEC
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcc
Confidence 478999999999999955 688999999975432 2447789999999999999999999999755 368999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
++ |+|.+++... .+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 112 ~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 112 ME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp CS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred cC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 96 5999999753 3899999999999999999999 78999999999999999999999999999976543
Q ss_pred C--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhh
Q 005880 518 S--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVRE 589 (672)
Q Consensus 518 ~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (672)
. ...+|..|+|||++. .+..++.++|||||||++|||++|+.||...... +....+......
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---------~~~~~i~~~~~~ 250 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL---------DQLNHILGILGS 250 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHH-TBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG---------GHHHHHHHHHCS
T ss_pred CCCccccccccccccCCCCCHHhc-CCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH---------HHHHHHHHHhCC
Confidence 2 346789999999754 2456899999999999999999999999654211 111111110000
Q ss_pred hc---cccccch-------hhc--cccCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 590 EW---TAEVFDL-------ELM--RYKDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 590 ~~---~~~~~d~-------~~~--~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .....+. ... ..... ......+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 0000000 000 00000 011245788999999999999999999984
No 219
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.7e-38 Score=326.89 Aligned_cols=242 Identities=24% Similarity=0.363 Sum_probs=187.9
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEc------CCeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFA------REEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~------~~~~~lv~e 436 (672)
.+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++.++ +||||+++++++.. .+..++|||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e 107 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEE
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEE
Confidence 47899999999999996 4789999999875432 467889999999998 79999999999987 467899999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|+++|+|.+++.... ...+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 108 ~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 108 FCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLH----QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp CCTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred cCCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 999999999998643 245899999999999999999999 7899999999999999999999999999997654
Q ss_pred CC-----CCCCCCcccCCCccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 517 PS-----TVPRSNGYRAPELSSSD---GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 517 ~~-----~~~~t~~y~aPE~l~~~---~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
.. ...++..|+|||++... +..++.++|||||||++|||++|+.||.... ..........
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------------~~~~~~~~~~ 248 (326)
T 2x7f_A 181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH------------PMRALFLIPR 248 (326)
T ss_dssp ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC------------HHHHHHHHHH
T ss_pred cCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc------------HHHHHHHhhc
Confidence 32 34578899999987522 4568899999999999999999999996321 1111111111
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. .... . ... ....+.+++.+||..||++|||+.|+++
T Consensus 249 ~~-~~~~-----~-~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 249 NP-APRL-----K-SKK---WSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp SC-CCCC-----S-CSC---SCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred Cc-cccC-----C-ccc---cCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 11 0000 0 011 1235778888999999999999999986
No 220
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6.1e-38 Score=357.55 Aligned_cols=232 Identities=25% Similarity=0.324 Sum_probs=191.5
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC---cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMP 439 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 439 (672)
.+.||+|+||.||+|+.. +++.||||++++.. ....+.+..|.+++..+ +||+|+++++++.+.+..|+||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 478999999999999965 68899999997532 22456788899999988 79999999999999999999999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC--
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP-- 517 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~-- 517 (672)
+|+|.++++... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++++||+|||+++....
T Consensus 426 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH----~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 496 (674)
T 3pfq_A 426 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQ----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 496 (674)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHH----HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH----hCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence 999999998543 4899999999999999999999 78999999999999999999999999999985432
Q ss_pred ---CCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 518 ---STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 518 ---~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
....||+.|+|||++. +..++.++|||||||++|||++|+.||... +..+....+.....
T Consensus 497 ~~~~~~~GT~~Y~APE~l~--~~~~~~~~DvwSlGvilyelltG~~Pf~~~------------~~~~~~~~i~~~~~--- 559 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQAPFEGE------------DEDELFQSIMEHNV--- 559 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHT--CCCBSTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHSSCC---
T ss_pred cccccccCCCcccCHhhhc--CCCCCccceEechHHHHHHHHcCCCCCCCC------------CHHHHHHHHHhCCC---
Confidence 2567899999999774 567899999999999999999999999643 22333333333221
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNM 631 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 631 (672)
..... ...++.+++.+||+.||++||++
T Consensus 560 ------~~p~~---~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 560 ------AYPKS---MSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp ------CCCTT---SCHHHHHHHHHHSCSSSTTCTTC
T ss_pred ------CCCcc---CCHHHHHHHHHHccCCHHHCCCC
Confidence 11111 22356788889999999999998
No 221
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=327.14 Aligned_cols=248 Identities=22% Similarity=0.263 Sum_probs=184.7
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEE--------------cCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYF--------------ARE 429 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--------------~~~ 429 (672)
.+.||+|+||.||+|... +|+.||||++........+++.+|++++++++||||+++++++. +..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 95 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCS
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccC
Confidence 478999999999999976 48999999998666556788999999999999999999999874 346
Q ss_pred eEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC-CCCcEEEec
Q 005880 430 EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD-KTGNARVSD 508 (672)
Q Consensus 430 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~-~~~~~kl~D 508 (672)
..++||||++ |+|.+++.. .++++..++.++.|+++||+||| +.+|+||||||+||+++ +++.+||+|
T Consensus 96 ~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 96 SVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIH----SANVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp EEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCeEEEcc
Confidence 7899999997 699999964 24899999999999999999999 78999999999999997 567999999
Q ss_pred cCCCccCCCC--------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChh
Q 005880 509 FGLSIFAPPS--------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLP 580 (672)
Q Consensus 509 fG~a~~~~~~--------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~ 580 (672)
||+++..... ...++..|+|||++.. ...++.++|||||||++|||++|+.||.... ..
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~ 231 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS-PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH------------EL 231 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHC-TTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------------HH
T ss_pred CccccccCCCcccccccccccccccccCcHHhcC-cccCCchhhhHhHHHHHHHHHhCCCCCCCCC------------HH
Confidence 9999866432 2334778999997643 3578999999999999999999999996432 11
Q ss_pred HHHHHHHhhhcc-------------ccccchhhccc-cCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 581 RWVQSVVREEWT-------------AEVFDLELMRY-KDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 581 ~~~~~~~~~~~~-------------~~~~d~~~~~~-~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+........... ........... ... ......+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 232 EQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 122222111000 00000000000 000 012346788899999999999999999975
No 222
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.5e-37 Score=330.73 Aligned_cols=258 Identities=18% Similarity=0.228 Sum_probs=183.3
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCC------eEEEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFARE------EKLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ 435 (672)
.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+ ..++||
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~ 109 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEE
Confidence 478999999999999954 68999999997532 234567889999999999999999999997654 679999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||++ |+|.+++.. .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 110 e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 110 ELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp ECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred EcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHH----HCCeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 9996 578888852 3889999999999999999999 789999999999999999999999999999866
Q ss_pred CCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCC---CCCCCCChhHH------
Q 005880 516 PPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGM---GCGGAVDLPRW------ 582 (672)
Q Consensus 516 ~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~---~~~~~~~~~~~------ 582 (672)
... ...+|..|+|||++. +..++.++|||||||++|||++|+.||......+.. ....+...+++
T Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 255 (371)
T 2xrw_A 178 GTSFMMTPYVVTRYYRAPEVIL--GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255 (371)
T ss_dssp ------------CTTCCHHHHT--TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCH
T ss_pred ccccccCCceecCCccCHHHhc--CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 543 456788999999765 457899999999999999999999999653210000 00000000000
Q ss_pred -HHHHHhhhccc------cccchhhcccc--ChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 583 -VQSVVREEWTA------EVFDLELMRYK--DIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 583 -~~~~~~~~~~~------~~~d~~~~~~~--~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
+.......... ..+........ ........+.+++.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 00000000000 00000000000 01123457889999999999999999999986
No 223
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=8.8e-38 Score=355.12 Aligned_cols=247 Identities=22% Similarity=0.315 Sum_probs=197.7
Q ss_pred HHhcccCcCCeEEEEEEEEcC----CcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEee
Q 005880 363 ASAEMLGKGGFGTAYKAVLDD----GSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 363 ~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.+.||+|+||.||+|.... +..||||+++.... ...+.+.+|+.++++++||||+++++++. ++..++||||
T Consensus 393 ~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~ 471 (656)
T 2j0j_A 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMEL 471 (656)
T ss_dssp EEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred EEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEc
Confidence 345789999999999999642 56799999875432 34578999999999999999999999984 5678999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
+++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 472 ~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 472 CTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp CTTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred CCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH----hCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 99999999997543 35899999999999999999999 78999999999999999999999999999987654
Q ss_pred C------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 518 S------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 518 ~------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
. ...++..|+|||++. +..++.++|||||||++|||++ |+.||... ...+....+....
T Consensus 544 ~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~------------~~~~~~~~i~~~~ 609 (656)
T 2j0j_A 544 STYYKASKGKLPIKWMAPESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQGV------------KNNDVIGRIENGE 609 (656)
T ss_dssp ----------CCGGGCCHHHHH--HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------------CHHHHHHHHHHTC
T ss_pred CcceeccCCCCCcceeCHHHhc--CCCCCchhhHHHHHHHHHHHHHcCCCCCCCC------------CHHHHHHHHHcCC
Confidence 3 233467899999764 4578999999999999999997 99999643 2222222222221
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhc
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRG 643 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 643 (672)
.. . .. ......+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 610 ~~-~-------~~---~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 610 RL-P-------MP---PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp CC-C-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC-C-------CC---ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 10 0 01 1123457788899999999999999999999998853
No 224
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=6.4e-38 Score=336.12 Aligned_cols=249 Identities=22% Similarity=0.330 Sum_probs=183.5
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCe------EEEEEeec
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREE------KLLVSEYM 438 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~lv~e~~ 438 (672)
.+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+. .++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 478999999999999987777799998854322 22479999999999999999999975443 78999999
Q ss_pred CCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC-CCCcEEEeccCCCccCCC
Q 005880 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 439 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~-~~~~~kl~DfG~a~~~~~ 517 (672)
+++.+........ ....+++..+..++.|+++||+||| +.+|+||||||+||+++ .++.+||+|||+++....
T Consensus 121 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 121 PETVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIH----SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp SEEHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred CccHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 7754433332111 1245899999999999999999999 78999999999999999 799999999999976543
Q ss_pred C----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc--
Q 005880 518 S----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW-- 591 (672)
Q Consensus 518 ~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 591 (672)
. ...+|..|+|||++.. ...++.++|||||||++|||++|+.||.... ..+.+..+.+...
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~~~------------~~~~l~~i~~~~g~p 261 (394)
T 4e7w_A 195 GEPNVSYICSRYYRAPELIFG-ATNYTTNIDIWSTGCVMAELMQGQPLFPGES------------GIDQLVEIIKVLGTP 261 (394)
T ss_dssp TCCCCSSCSCGGGCCHHHHTT-CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS------------HHHHHHHHHHHHCCC
T ss_pred CCCCcccccCcCccCHHHHcC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHHHhCCC
Confidence 2 4567889999997643 3468999999999999999999999997532 1111111111000
Q ss_pred --------cccccchhhc--cccChH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 --------TAEVFDLELM--RYKDIE-----EEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 --------~~~~~d~~~~--~~~~~~-----~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.......... ...... ....++.+++.+||+.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 262 SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0000000000 000000 12246788999999999999999999986
No 225
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.9e-37 Score=323.98 Aligned_cols=252 Identities=23% Similarity=0.311 Sum_probs=193.1
Q ss_pred hcccCcCCeEEEEEEEE--cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCC------ceeeeEEEEEcCCeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVL--DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHP------NLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~l~~~~~~~~~~~lv~e 436 (672)
.+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|+++++.++|+ +++++++++.+.+..++|||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 47899999999999986 368999999997543 2456788999998888655 59999999999999999999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC----------------
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK---------------- 500 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~---------------- 500 (672)
|+ +++|.+++.... ..++++..+..++.|+++||+||| +.+|+||||||+||+++.
T Consensus 98 ~~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~ 169 (339)
T 1z57_A 98 LL-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLH----SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDER 169 (339)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred CC-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHH----HCCCcCCCCCHHHEEEeccccccccCCccccccc
Confidence 99 889999997653 246899999999999999999999 789999999999999987
Q ss_pred ---CCcEEEeccCCCccCCCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 005880 501 ---TGNARVSDFGLSIFAPPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGG 575 (672)
Q Consensus 501 ---~~~~kl~DfG~a~~~~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~ 575 (672)
++.+||+|||+++..... ...+|..|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------- 240 (339)
T 1z57_A 170 TLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVIL--ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK------- 240 (339)
T ss_dssp EESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHT--TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH-------
T ss_pred cccCCCceEeeCcccccCccccccccCCccccChHHhh--CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH-------
Confidence 668999999999866543 456789999999765 557899999999999999999999999643211
Q ss_pred CCChhHHHHHHHhh--------hccccccc---------------------hhhccccChHHHHHHHHHHHHhccCCCCC
Q 005880 576 AVDLPRWVQSVVRE--------EWTAEVFD---------------------LELMRYKDIEEEMVGLLQVAMACTSASPD 626 (672)
Q Consensus 576 ~~~~~~~~~~~~~~--------~~~~~~~d---------------------~~~~~~~~~~~~~~~l~~li~~Cl~~dP~ 626 (672)
.....+...... ......+. +..............+.+++.+||+.||+
T Consensus 241 --~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 318 (339)
T 1z57_A 241 --EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318 (339)
T ss_dssp --HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred --HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcc
Confidence 011111111000 00000000 00000011123456788999999999999
Q ss_pred CCCCHHHHHH
Q 005880 627 QRPNMSHVVK 636 (672)
Q Consensus 627 ~RPt~~evl~ 636 (672)
+|||+.|+++
T Consensus 319 ~Rpt~~ell~ 328 (339)
T 1z57_A 319 KRITLREALK 328 (339)
T ss_dssp TSCCHHHHTT
T ss_pred cccCHHHHhc
Confidence 9999999974
No 226
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.1e-37 Score=329.65 Aligned_cols=247 Identities=21% Similarity=0.288 Sum_probs=187.8
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeE------EEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEK------LLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~------~lv~ 435 (672)
.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++.++||||+++++++...+.. ++||
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 126 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEE
Confidence 478999999999999954 689999999975432 2357889999999999999999999999876654 9999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||++ |+|.+++. ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 127 e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 127 PFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp ECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred cccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 9996 68888874 23899999999999999999999 789999999999999999999999999999866
Q ss_pred CCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcc-
Q 005880 516 PPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWT- 592 (672)
Q Consensus 516 ~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 592 (672)
... ...+|..|+|||++.. ...++.++|||||||++|||++|+.||.... ..+.+.........
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~------------~~~~~~~i~~~~~~~ 261 (371)
T 4exu_A 195 DAEMTGYVVTRWYRAPEVILS-WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD------------YLDQLTQILKVTGVP 261 (371)
T ss_dssp -----CTTCCCTTSCHHHHSC-CSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS------------HHHHHHHHHHHHCCC
T ss_pred ccCcCCcccCccccCHHHhcC-CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC------------hHHHHHHHHHHhCCC
Confidence 543 4567899999997643 2578999999999999999999999996432 22222222111000
Q ss_pred -----ccccc-------hhhc--cccCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 593 -----AEVFD-------LELM--RYKDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 593 -----~~~~d-------~~~~--~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....+ .... ..... ......+.+++.+||+.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 262 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00000 0000 00000 012346788999999999999999999975
No 227
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7.6e-38 Score=338.30 Aligned_cols=254 Identities=24% Similarity=0.340 Sum_probs=186.1
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcC----C--eEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAR----E--EKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----~--~~~lv~e~ 437 (672)
.+.||+|+||.||+|+.. +|+.||||++.... +.+.+|++++++++||||+++++++... + ..++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 478999999999999975 68999999986432 2335799999999999999999998642 1 35689999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC-CcEEEeccCCCccCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT-GNARVSDFGLSIFAP 516 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~-~~~kl~DfG~a~~~~ 516 (672)
+++ +|.+.+..... ....+++..+..++.|+++||+||| +.+|+||||||+|||++.+ +.+||+|||+++...
T Consensus 135 ~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 135 VPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp CCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 975 67666543111 1245999999999999999999999 8899999999999999965 578999999998654
Q ss_pred CC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh--
Q 005880 517 PS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE-- 590 (672)
Q Consensus 517 ~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 590 (672)
.. ...+|..|+|||++.. ...++.++|||||||++|||++|+.||.... ..+.+..+.+..
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwSlG~il~ell~G~~pf~~~~------------~~~~l~~i~~~lg~ 275 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDS------------GVDQLVEIIKVLGT 275 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTT-CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS------------HHHHHHHHHHHHCS
T ss_pred cCCCceeeeeCCCcCCHHHHcC-CCCCCchhhhHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHHHhCC
Confidence 32 4567899999997642 3468999999999999999999999997532 111222221110
Q ss_pred -----------ccccccchhhccccCh-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHHHHh
Q 005880 591 -----------WTAEVFDLELMRYKDI-----EEEMVGLLQVAMACTSASPDQRPNMSHVVK--LIEELR 642 (672)
Q Consensus 591 -----------~~~~~~d~~~~~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~--~L~~i~ 642 (672)
...+..-+.... ... .....++.+|+.+||..||++|||+.|+++ .++++.
T Consensus 276 p~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 276 PTREQIREMNPNYTEFKFPQIKA-HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp CCHHHHHHHCSCCCCCCCCCCCC-CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred CCHHHHHhhChhhhhhccCccCC-CCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 000000000000 000 011246788899999999999999999985 344443
No 228
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=7.2e-38 Score=339.98 Aligned_cols=245 Identities=22% Similarity=0.279 Sum_probs=183.2
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +||||+++++++.+++..++||||++ |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 3679999999998777778999999998643 345678999999876 89999999999999999999999995 699
Q ss_pred hHHhhcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC-------------CcEEEec
Q 005880 444 FWLLHGNRGPGR--TPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT-------------GNARVSD 508 (672)
Q Consensus 444 ~~~l~~~~~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~-------------~~~kl~D 508 (672)
.+++........ ....+..++.++.|++.||+||| +.+|+||||||+||+++.+ +.+||+|
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D 171 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence 999986542111 11234456789999999999999 7899999999999999754 4899999
Q ss_pred cCCCccCCCC---------CCCCCCcccCCCcccc-----CCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCC
Q 005880 509 FGLSIFAPPS---------TVPRSNGYRAPELSSS-----DGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGC 573 (672)
Q Consensus 509 fG~a~~~~~~---------~~~~t~~y~aPE~l~~-----~~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~ 573 (672)
||+++..... ...+|.+|+|||++.. ....++.++|||||||++|||+| |+.||......
T Consensus 172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~----- 246 (434)
T 2rio_A 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR----- 246 (434)
T ss_dssp CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH-----
T ss_pred cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh-----
Confidence 9999876542 2457899999998754 12578999999999999999999 99999643110
Q ss_pred CCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 574 GGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
. ........ +..............++.+++.+||+.||++|||+.||++
T Consensus 247 -----~----~~i~~~~~-----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 -----E----SNIIRGIF-----SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp -----H----HHHHHTCC-----CCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----H----HHHhcCCC-----CcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 0 11111111 1000011112344567889999999999999999999985
No 229
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.2e-37 Score=316.17 Aligned_cols=240 Identities=24% Similarity=0.333 Sum_probs=192.5
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCC--cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 106 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence 478999999999999975 68999999986432 235678999999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC---CcEEEeccCCCccCCCC
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT---GNARVSDFGLSIFAPPS 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~---~~~kl~DfG~a~~~~~~ 518 (672)
+|.+++... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.+ +.+||+|||++......
T Consensus 107 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 107 ELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH----KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp BHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred CHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 999988654 24899999999999999999999 7899999999999999754 47999999999866543
Q ss_pred C----CCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 T----VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 ~----~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
. ..++..|+|||++. ..++.++||||||+++|+|++|+.||... ...+.............
T Consensus 178 ~~~~~~~~~~~y~aPE~~~---~~~~~~~Di~slG~~l~~l~~g~~p~~~~------------~~~~~~~~~~~~~~~~~ 242 (287)
T 2wei_A 178 TKMKDRIGTAYYIAPEVLR---GTYDEKCDVWSAGVILYILLSGTPPFYGK------------NEYDILKRVETGKYAFD 242 (287)
T ss_dssp SSCSCHHHHHTTCCHHHHT---TCCCTHHHHHHHHHHHHHHHHSSCSSCCS------------SHHHHHHHHHHCCCCCC
T ss_pred CccccccCcccccChHHhc---CCCCCchhhHhHHHHHHHHHhCCCCCCCC------------CHHHHHHHHHcCCCCCC
Confidence 2 23466799999764 34889999999999999999999999643 22222222222211100
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
..... .....+.+++.+||+.||++|||+.|+++
T Consensus 243 -----~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 243 -----LPQWR---TISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp -----SGGGT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -----chhhh---hcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00011 12235778888999999999999999987
No 230
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=9.2e-38 Score=326.55 Aligned_cols=249 Identities=23% Similarity=0.341 Sum_probs=172.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHH-HHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHME-VLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|... +|+.||||+++.... ....++..|+. +++.++||||+++++++.+++..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 478999999999999975 689999999975432 23445666665 77888999999999999999999999999975
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCC-CcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL-KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
+|.+++..........+++..+..++.|+++||.||| +. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 181 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK----ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA 181 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH----HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh----ccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccc
Confidence 8887776321111245899999999999999999999 66 9999999999999999999999999999766543
Q ss_pred --CCCCCCcccCCCcccc--CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 519 --TVPRSNGYRAPELSSS--DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~--~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
...++..|+|||++.. .+..++.++|||||||++|||++|+.||....... +.+...... .
T Consensus 182 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----------~~~~~~~~~----~ 246 (327)
T 3aln_A 182 KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-----------DQLTQVVKG----D 246 (327)
T ss_dssp ------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------------CCCCCS----C
T ss_pred cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-----------HHHHHHhcC----C
Confidence 3367889999997632 24568899999999999999999999997532110 000000000 0
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.+.... .........+.+++.+||+.||++|||+.|+++
T Consensus 247 --~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 247 --PPQLSN-SEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp --CCCCCC-CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CCCCCC-cccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 000000 000112235788888999999999999999976
No 231
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2e-37 Score=330.08 Aligned_cols=255 Identities=20% Similarity=0.294 Sum_probs=190.7
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHHcCCC-----------CCceeeeEEEEEcCC---
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR-----------HPNLVGLKAYYFARE--- 429 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~~~~--- 429 (672)
.+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++ ||||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 102 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG 102 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCC
Confidence 47899999999999995 568999999997533 24567889999988876 899999999998654
Q ss_pred -eEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCC-CcEecCCCCCCEEeC------CC
Q 005880 430 -EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL-KLTHGNIKSTNVLLD------KT 501 (672)
Q Consensus 430 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-~iiH~Dlkp~NIll~------~~ 501 (672)
..++||||+ +++|.+++..... ..+++..+..++.|++.||+||| +. +|+||||||+||+++ ..
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH----~~~~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 103 VHVVMVFEVL-GENLLALIKKYEH---RGIPLIYVKQISKQLLLGLDYMH----RRCGIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp EEEEEEECCC-CEEHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHH----HTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred ceEEEEEecC-CCCHHHHHHHhhc---cCCcHHHHHHHHHHHHHHHHHHH----hcCCEEecCCChHHeEEeccCCCcCc
Confidence 788999999 8999999986532 35899999999999999999999 66 999999999999994 44
Q ss_pred CcEEEeccCCCccCCCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCh
Q 005880 502 GNARVSDFGLSIFAPPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDL 579 (672)
Q Consensus 502 ~~~kl~DfG~a~~~~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~ 579 (672)
+.+||+|||+++..... ...+|..|+|||++. +..++.++|||||||++|||+||+.||....... ....
T Consensus 175 ~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~------~~~~ 246 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLL--GAPWGCGADIWSTACLIFELITGDFLFEPDEGHS------YTKD 246 (373)
T ss_dssp EEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHH--TCCCCTHHHHHHHHHHHHHHHHSSCCC---------------CH
T ss_pred ceEEEcccccccccCCCCCCCCCCccccCcHHHh--CCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccc------cCCh
Confidence 57999999999766543 456789999999765 4578999999999999999999999997543221 0001
Q ss_pred hHHHHHHHhh------------hccccccch------------------hhccccChHHHHHHHHHHHHhccCCCCCCCC
Q 005880 580 PRWVQSVVRE------------EWTAEVFDL------------------ELMRYKDIEEEMVGLLQVAMACTSASPDQRP 629 (672)
Q Consensus 580 ~~~~~~~~~~------------~~~~~~~d~------------------~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP 629 (672)
...+...... ......++. ..............+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 1111111110 000000000 0001112245567888999999999999999
Q ss_pred CHHHHHH
Q 005880 630 NMSHVVK 636 (672)
Q Consensus 630 t~~evl~ 636 (672)
|+.|+++
T Consensus 327 t~~ell~ 333 (373)
T 1q8y_A 327 DAGGLVN 333 (373)
T ss_dssp CHHHHHT
T ss_pred CHHHHhh
Confidence 9999976
No 232
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4.1e-37 Score=319.53 Aligned_cols=241 Identities=20% Similarity=0.278 Sum_probs=187.9
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCC--cchHHHHHHHHHHHcCCC--CCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAS--IGGKREFEQHMEVLGRLR--HPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++.+++ ||||+++++++...+..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 47899999999999998889999999986433 234578899999999997 5999999999999999999999 568
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
++|.+++... ..+++..++.++.|+++||+||| +.+|+||||||+||++++ +.+||+|||+++.....
T Consensus 112 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~ 181 (313)
T 3cek_A 112 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT 181 (313)
T ss_dssp EEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC------
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCcccEEEEC-CeEEEeeccccccccCccc
Confidence 8999999854 35899999999999999999999 789999999999999964 89999999999866432
Q ss_pred -----CCCCCCcccCCCccccC---------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHH
Q 005880 519 -----TVPRSNGYRAPELSSSD---------GRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQ 584 (672)
Q Consensus 519 -----~~~~t~~y~aPE~l~~~---------~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 584 (672)
...++..|+|||++... ...++.++||||||+++|||++|+.||.... .......
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----------~~~~~~~ 250 (313)
T 3cek_A 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----------NQISKLH 250 (313)
T ss_dssp --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----------SHHHHHH
T ss_pred cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH-----------HHHHHHH
Confidence 34578899999986531 2468889999999999999999999996421 1112222
Q ss_pred HHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 005880 585 SVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKL 637 (672)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 637 (672)
........... ... ....+.+++.+||+.||++|||+.|+++.
T Consensus 251 ~~~~~~~~~~~-------~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 251 AIIDPNHEIEF-------PDI---PEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHCTTSCCCC-------CCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhcccccCC-------ccc---chHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 22221111000 011 12357788889999999999999999863
No 233
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.8e-37 Score=318.69 Aligned_cols=240 Identities=21% Similarity=0.375 Sum_probs=184.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEc-------------CCe
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA-------------REE 430 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------------~~~ 430 (672)
.+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|++++++++||||+++++++.+ .+.
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 478999999999999964 78999999996432 345788999999999999999999998865 356
Q ss_pred EEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 431 KLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 431 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
.++||||+++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIH----SQGIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred eEEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHH----hCCeecccCCHHhEEEcCCCCEEEeeCc
Confidence 789999999999999998543 45788999999999999999999 7899999999999999999999999999
Q ss_pred CCccCCCC-------------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 005880 511 LSIFAPPS-------------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGM 571 (672)
Q Consensus 511 ~a~~~~~~-------------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~ 571 (672)
+++..... ...++..|+|||++.. ...++.++|||||||++|||++ ||...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~il~~l~~---p~~~~------ 231 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG-TGHYNEKIDMYSLGIIFFEMIY---PFSTG------ 231 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTS-CSCCCTHHHHHHHHHHHHHHHS---CCSSH------
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccC-CCCCcchhhHHHHHHHHHHHHh---ccCCc------
Confidence 99765421 3346788999997642 2468899999999999999998 54311
Q ss_pred CCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 572 GCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.+............ ..+.+.. .......+.+++.+||+.||++|||+.|+++
T Consensus 232 -----~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 232 -----MERVNILKKLRSVS---IEFPPDF-----DDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp -----HHHHHHHHHHHSTT---CCCCTTC-----CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -----hhHHHHHHhccccc---cccCccc-----cccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 11111222111110 0001110 1122345778888999999999999999985
No 234
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=7e-37 Score=323.35 Aligned_cols=248 Identities=19% Similarity=0.241 Sum_probs=189.3
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-chHHHHHHHHHHHcCCCCCceeeeEEEEEcC-----CeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-GGKREFEQHMEVLGRLRHPNLVGLKAYYFAR-----EEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~ 437 (672)
.+.||+|+||.||+|+.. +|+.||||+++.... .....+.+|++++++++||||+++++++... ...++||||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 95 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEec
Confidence 478999999999999965 689999999975432 3456788999999999999999999998754 678999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP 517 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 517 (672)
++ |+|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 96 ~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH----~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 96 MQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLH----GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp CS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred cC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 96 6999998753 4899999999999999999999 78999999999999999999999999999976543
Q ss_pred C---------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHH
Q 005880 518 S---------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRW 582 (672)
Q Consensus 518 ~---------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 582 (672)
. ...+|..|+|||++.. +..++.++|||||||++|||++|+.||.... ..+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~ 231 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLT-SAKYSRAMDVWSCGCILAELFLRRPIFPGRD------------YRHQ 231 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHS-CCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------------HHHH
T ss_pred ccccccCccccccchhhccccccccCCeeecc-CCCccchhhHHHHHHHHHHHHhCCCCCCCCC------------cHHH
Confidence 2 2356888999997642 3678999999999999999999999997432 1111
Q ss_pred HHHHHhhh---c----cccccch-------hhc--cccCh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 583 VQSVVREE---W----TAEVFDL-------ELM--RYKDI----EEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 583 ~~~~~~~~---~----~~~~~d~-------~~~--~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
........ . ....... ... ..... ......+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 232 LLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 11111000 0 0000000 000 00000 112345778899999999999999999975
No 235
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.7e-37 Score=325.65 Aligned_cols=242 Identities=21% Similarity=0.299 Sum_probs=165.5
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEc----CCeEEEEEeecCC
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA----REEKLLVSEYMPN 440 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~ 440 (672)
+.||+|+||.||+|+.. +|+.||||++.... ....+....+..++||||+++++++.. ....++||||+++
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~g 110 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEG 110 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTT
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCC
Confidence 56999999999999966 68999999986532 122222234566799999999999876 4457899999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC---CCcEEEeccCCCccCCC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK---TGNARVSDFGLSIFAPP 517 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~---~~~~kl~DfG~a~~~~~ 517 (672)
|+|.+++.... ...+++.+++.++.|+++||+||| +.+|+||||||+||+++. ++.+||+|||+++....
T Consensus 111 g~L~~~l~~~~---~~~l~~~~~~~i~~ql~~~l~~LH----~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 111 GELFSRIQERG---DQAFTEREAAEIMRDIGTAIQFLH----SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp EEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred CCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 99999998653 246999999999999999999999 789999999999999986 45599999999976654
Q ss_pred C---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccc
Q 005880 518 S---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAE 594 (672)
Q Consensus 518 ~---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (672)
. ...+|..|+|||++. +..++.++|||||||++|||++|+.||........ ............
T Consensus 184 ~~~~~~~~t~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--------~~~~~~~~~~~~---- 249 (336)
T 3fhr_A 184 NALQTPCYTPYYVAPEVLG--PEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI--------SPGMKRRIRLGQ---- 249 (336)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------------
T ss_pred cccccCCCCcCccChhhhC--CCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh--------hhhHHHhhhccc----
Confidence 3 455688999999763 56788999999999999999999999975432210 000000000000
Q ss_pred ccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.... ..........+.+++.+||+.||++|||+.|+++
T Consensus 250 -~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 250 -YGFP---NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp --CCC---TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -cccC---chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000 0000122345778888999999999999999987
No 236
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.6e-37 Score=327.54 Aligned_cols=254 Identities=23% Similarity=0.314 Sum_probs=177.0
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCe-------EEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREE-------KLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-------~~lv~e 436 (672)
.+.||+|+||.||+|+.. +|+.||||++..... ....+.+|++.+..++||||+++++++...+. .++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEee
Confidence 367999999999999964 689999999865432 33456778888888999999999999976433 789999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-CCcEEEeccCCCccC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK-TGNARVSDFGLSIFA 515 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~-~~~~kl~DfG~a~~~ 515 (672)
|+++ +|.+.+.... .....+++..+..++.|++.||.|||.. +.+|+||||||+||+++. ++.+||+|||+++..
T Consensus 107 ~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~--~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~ 182 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLP--SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL 182 (360)
T ss_dssp CCSC-BHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTST--TTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCC
T ss_pred cccc-cHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCC--CCCeecCcCCHHHEEEeCCCCcEEEeeCCCceec
Confidence 9976 5544443211 0124589999999999999999999943 679999999999999997 899999999999876
Q ss_pred CCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh-
Q 005880 516 PPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE- 590 (672)
Q Consensus 516 ~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 590 (672)
... ...+|..|+|||++.. ...++.++|||||||++|||++|+.||.... ....+..+.+..
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~Di~slG~il~ell~g~~pf~~~~------------~~~~~~~~~~~~~ 249 (360)
T 3e3p_A 183 SPSEPNVAYICSRYYRAPELIFG-NQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN------------SAGQLHEIVRVLG 249 (360)
T ss_dssp CTTSCCCSTTSCGGGCCHHHHTT-CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS------------HHHHHHHHHHHHC
T ss_pred CCCCCcccccCCcceeCHHHHcC-CCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC------------hHHHHHHHHHHcC
Confidence 543 4457889999997642 3458999999999999999999999997532 111222221110
Q ss_pred --------------ccccccchhhcc-----ccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 591 --------------WTAEVFDLELMR-----YKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 591 --------------~~~~~~d~~~~~-----~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
......+..... ..........+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000000 0000113456888999999999999999999974
No 237
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=8.5e-37 Score=326.29 Aligned_cols=192 Identities=27% Similarity=0.345 Sum_probs=163.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCC-CC-----ceeeeEEEEEcCCeEEEEEee
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLR-HP-----NLVGLKAYYFAREEKLLVSEY 437 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~~~~lv~e~ 437 (672)
.+.||+|+||.||+|+.. +++.||||+++... ....++..|++++..++ |+ +|+++++++...+..++||||
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 137 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM 137 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEec
Confidence 478999999999999965 68899999997542 24567788888888774 44 499999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC--CCCcEEEeccCCCccC
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD--KTGNARVSDFGLSIFA 515 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~--~~~~~kl~DfG~a~~~ 515 (672)
++ |+|.+++..... ..+++..+..++.|++.||.|||.. +.+|+||||||+|||++ .++.+||+|||+++..
T Consensus 138 ~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~--~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~ 211 (382)
T 2vx3_A 138 LS-YNLYDLLRNTNF---RGVSLNLTRKFAQQMCTALLFLATP--ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211 (382)
T ss_dssp CC-CBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHTST--TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred CC-CCHHHHHhhcCc---CCCCHHHHHHHHHHHHHHHHHhccC--CCCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence 95 599999986542 3589999999999999999999932 46899999999999995 4788999999999876
Q ss_pred CCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 516 PPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 516 ~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
... ...+|..|+|||++. +..++.++|||||||++|||+||+.||...
T Consensus 212 ~~~~~~~~~t~~y~aPE~~~--~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 212 GQRIYQYIQSRFYRSPEVLL--GMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TCCCCSSCSCGGGCCHHHHT--TCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccccCCccccChHHHc--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 543 566889999999765 457899999999999999999999999743
No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.7e-37 Score=324.10 Aligned_cols=247 Identities=20% Similarity=0.273 Sum_probs=187.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEEcCCe------EEEEE
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREE------KLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~lv~ 435 (672)
.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++++++||||+++++++...+. .++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 467999999999999964 689999999975432 235678999999999999999999999987653 49999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
||++ |+|.+++. ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 109 e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 109 PFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp ECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred cccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 9996 68888774 23899999999999999999999 789999999999999999999999999999866
Q ss_pred CCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhc--
Q 005880 516 PPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEW-- 591 (672)
Q Consensus 516 ~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 591 (672)
... ...+|..|+|||++.. ...++.++|||||||++|||++|+.||.... ..+.+..+.....
T Consensus 177 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~~~~~~i~~~~~~~ 243 (353)
T 3coi_A 177 DAEMTGYVVTRWYRAPEVILS-WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD------------YLDQLTQILKVTGVP 243 (353)
T ss_dssp -------CCSBCCSCHHHHSC-CSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC------------HHHHHHHHHHHHCBC
T ss_pred CCCccccccCcCcCCHHHHhC-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------------HHHHHHHHHHHhCCC
Confidence 543 4567899999997653 2578899999999999999999999997432 1222222211100
Q ss_pred ----cccccch------------hhccc-cChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 592 ----TAEVFDL------------ELMRY-KDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 592 ----~~~~~d~------------~~~~~-~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
...+.+. ..... .........+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 244 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000 00000 000122346788889999999999999999975
No 239
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.8e-36 Score=316.47 Aligned_cols=250 Identities=23% Similarity=0.287 Sum_probs=188.2
Q ss_pred hcccCcCCeEEEEEEEE--cCCcEEEEEEcccCCc--chHHHHHHHHHHHcCC---CCCceeeeEEEEE-----cCCeEE
Q 005880 365 AEMLGKGGFGTAYKAVL--DDGSVVAVKRLKDASI--GGKREFEQHMEVLGRL---RHPNLVGLKAYYF-----AREEKL 432 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~--~~g~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~-----~~~~~~ 432 (672)
.+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|+++++.+ +||||+++++++. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 47899999999999997 4688999999864322 1233566777776655 8999999999987 456788
Q ss_pred EEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCC
Q 005880 433 LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS 512 (672)
Q Consensus 433 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a 512 (672)
+||||++ |+|.+++..... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 96 lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH----~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~ 167 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLA 167 (326)
T ss_dssp EEEECCS-CBHHHHHHHSCT---TCSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred EEEecCC-CCHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCCHHHeEEcCCCCEEEecCccc
Confidence 9999997 699999976542 34899999999999999999999 789999999999999999999999999999
Q ss_pred ccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 513 IFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 513 ~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
+..... ...++..|+|||++. +..++.++|||||||++|||++|+.||.... .......+..
T Consensus 168 ~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~~~~i~~ 233 (326)
T 1blx_A 168 RIYSFQMALTSVVVTLWYRAPEVLL--QSSYATPVDLWSVGCIFAEMFRRKPLFRGSS------------DVDQLGKILD 233 (326)
T ss_dssp CCCCGGGGGCCCCCCCTTCCHHHHT--TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------------HHHHHHHHHH
T ss_pred ccccCCCCccccccccceeCHHHHh--cCCCCcchhHHHHHHHHHHHHcCCCCCCCCC------------HHHHHHHHHH
Confidence 766532 456788999999764 4578999999999999999999999996432 1122222221
Q ss_pred hh-------ccccccchh--hc------cccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 589 EE-------WTAEVFDLE--LM------RYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 589 ~~-------~~~~~~d~~--~~------~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. +......+. .. ...........+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 234 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 10 000000000 00 00000112345678888999999999999999974
No 240
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=316.05 Aligned_cols=243 Identities=22% Similarity=0.297 Sum_probs=173.9
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc-h-HHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG-G-KREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
.+.||+|+||.||+|... +|+.||||++...... . .+.+.++..+++.++||||+++++++.+++..++||||+ ++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 108 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GT 108 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SE
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CC
Confidence 478999999999999975 6899999999754332 2 234445556788889999999999999999999999999 55
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCC--
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS-LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-- 518 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 518 (672)
.+..+..... ..+++..+..++.|+++||+||| + ++|+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH----~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 109 CAEKLKKRMQ----GPIPERILGKMTVAIVKALYYLK----EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp EHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHH----HHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred cHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH----hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 6655554322 35899999999999999999999 5 38999999999999999999999999999765433
Q ss_pred --CCCCCCcccCCCcccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccc
Q 005880 519 --TVPRSNGYRAPELSSS---DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTA 593 (672)
Q Consensus 519 --~~~~t~~y~aPE~l~~---~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (672)
...++..|+|||++.. ....++.++|||||||++|||++|+.||.... ...+...........
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----------~~~~~~~~~~~~~~~- 248 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK-----------TDFEVLTKVLQEEPP- 248 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC-----------SHHHHHHHHHHSCCC-
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC-----------ccHHHHHHHhccCCC-
Confidence 3457889999998742 24568899999999999999999999996421 122222222222110
Q ss_pred cccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 594 EVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....... ....+.+++.+||+.||.+|||+.|+++
T Consensus 249 -----~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 249 -----LLPGHMG---FSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp -----CCCSSSC---CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -----CCCccCC---CCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0000011 1235778888999999999999999986
No 241
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.7e-36 Score=320.29 Aligned_cols=190 Identities=25% Similarity=0.386 Sum_probs=162.4
Q ss_pred hcccCcCCeEEEEEEEEc-CC-cEEEEEEcccCCcchHHHHHHHHHHHcCCCCCc------eeeeEEEEEcCCeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVLD-DG-SVVAVKRLKDASIGGKREFEQHMEVLGRLRHPN------LVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~~~lv~e 436 (672)
.+.||+|+||.||+|... ++ +.||||+++... ...+.+.+|++++++++|++ ++.+++++...+..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 478999999999999964 34 789999997543 34567888999998887665 9999999999999999999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEe------------------
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL------------------ 498 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll------------------ 498 (672)
|+ +++|.+++.... ...+++.+++.++.|+++||+||| +.+|+||||||+||++
T Consensus 103 ~~-~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~ 174 (355)
T 2eu9_A 103 LL-GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLH----ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174 (355)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred cc-CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEeccccccccccccccccc
Confidence 99 667777776543 245899999999999999999999 8899999999999999
Q ss_pred -CCCCcEEEeccCCCccCCCC--CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 005880 499 -DKTGNARVSDFGLSIFAPPS--TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565 (672)
Q Consensus 499 -~~~~~~kl~DfG~a~~~~~~--~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~ 565 (672)
+.++.+||+|||+++..... ...+|..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 175 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 175 SVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVIL--ELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp EESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHT--TCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccCCCcEEEeecCccccccccccCCcCCCcccCCeeee--cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 56789999999999865543 556899999999765 567899999999999999999999999743
No 242
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.1e-37 Score=331.82 Aligned_cols=239 Identities=23% Similarity=0.326 Sum_probs=180.2
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+.||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +||||+++++++.+....++||||++ |+|
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L 104 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATL 104 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCH
Confidence 368999999997665566799999999975433 2356899999998 79999999999999999999999995 699
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC-----CCcEEEeccCCCccCCCC
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK-----TGNARVSDFGLSIFAPPS 518 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~-----~~~~kl~DfG~a~~~~~~ 518 (672)
.+++.... ....+..++.++.|+++||+||| +.+|+||||||+||+++. ...+||+|||+++.....
T Consensus 105 ~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 105 QEYVEQKD----FAHLGLEPITLLQQTTSGLAHLH----SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp HHHHHSSS----CCCCSSCHHHHHHHHHHHHHHHH----HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred HHHHHhcC----CCccchhHHHHHHHHHHHHHHHH----HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 99998654 22444566789999999999999 789999999999999953 336889999999765432
Q ss_pred --------CCCCCCcccCCCccccC-CCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 519 --------TVPRSNGYRAPELSSSD-GRKQSQKSDVYSFGVLLLELLT-GKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 519 --------~~~~t~~y~aPE~l~~~-~~~~~~~~DV~S~Gvvl~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
...+|.+|+|||++... ...++.++|||||||++|||+| |+.||..... ........
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-------------~~~~~~~~ 243 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-------------RQANILLG 243 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-------------HHHHHHTT
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-------------HHHHHHhc
Confidence 35689999999987532 3567889999999999999999 8999853211 11111111
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
. ....... ........+.+++.+||+.||++|||+.||++
T Consensus 244 ~-~~~~~~~-------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 244 A-CSLDCLH-------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp C-CCCTTSC-------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c-CCccccC-------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1 0000000 01123345678889999999999999999983
No 243
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.5e-37 Score=322.15 Aligned_cols=232 Identities=21% Similarity=0.378 Sum_probs=188.1
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcc------hHHHHHHHHHHHcCCC--CCceeeeEEEEEcCCeEEEEE
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIG------GKREFEQHMEVLGRLR--HPNLVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 435 (672)
.+.||+|+||.||+|+. .+|+.||||+++..... ..+.+.+|++++++++ |+||+++++++...+..++|+
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 47899999999999995 46899999998754321 2346778999999996 599999999999999999999
Q ss_pred eecCC-CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC-CCCcEEEeccCCCc
Q 005880 436 EYMPN-GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSI 513 (672)
Q Consensus 436 e~~~~-g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~-~~~~~kl~DfG~a~ 513 (672)
||+.+ ++|.+++... ..+++..++.++.|+++||+||| +.+|+||||||+||+++ +++.+||+|||+++
T Consensus 128 e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 128 ERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCH----NCGVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp ECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 99976 8999999753 35899999999999999999999 78999999999999999 78999999999998
Q ss_pred cCCCC---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhh
Q 005880 514 FAPPS---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREE 590 (672)
Q Consensus 514 ~~~~~---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (672)
..... ...+|..|+|||++.. ....+.++|||||||++|||++|+.||.... ......
T Consensus 199 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------------~~~~~~ 259 (320)
T 3a99_A 199 LLKDTVYTDFDGTRVYSPPEWIRY-HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------------EIIRGQ 259 (320)
T ss_dssp ECCSSCBCCCCSCGGGSCHHHHHH-SCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------------HHHHCC
T ss_pred ccccccccCCCCCccCCChHHhcc-CCCCCccchHHhHHHHHHHHHHCCCCCCChh------------------hhhccc
Confidence 76543 4567889999997643 2344789999999999999999999995320 111110
Q ss_pred ccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
. .+ ... ...++.+++.+||+.||++|||+.|+++
T Consensus 260 ~---~~------~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 V---FF------RQR---VSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp C---CC------SSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c---cc------ccc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00 011 1235778888999999999999999975
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=320.56 Aligned_cols=232 Identities=24% Similarity=0.400 Sum_probs=182.2
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcc------hHHHHHHHHHHHcCC----CCCceeeeEEEEEcCCeEEE
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIG------GKREFEQHMEVLGRL----RHPNLVGLKAYYFAREEKLL 433 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~niv~l~~~~~~~~~~~l 433 (672)
.+.||+|+||.||+|+. .+|+.||||+++..... ....+.+|++++.++ +||||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 47899999999999985 46899999999754321 223456788888887 89999999999999999999
Q ss_pred EEee-cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeC-CCCcEEEeccCC
Q 005880 434 VSEY-MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFGL 511 (672)
Q Consensus 434 v~e~-~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~-~~~~~kl~DfG~ 511 (672)
|+|| +++++|.+++... ..+++..++.++.|+++||+||| +.+|+||||||+||+++ .++.+||+|||+
T Consensus 116 v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~ 186 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCH----SRGVVHRDIKDENILIDLRRGCAKLIDFGS 186 (312)
T ss_dssp EEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH----HHTEECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred EEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCChhhEEEeCCCCeEEEEEcch
Confidence 9999 7899999999754 34899999999999999999999 77999999999999999 889999999999
Q ss_pred CccCCCC---CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 512 SIFAPPS---TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 512 a~~~~~~---~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
++..... ...++..|+|||++.. ....+.++||||||+++|||++|+.||.... ....
T Consensus 187 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------------~~~~ 247 (312)
T 2iwi_A 187 GALLHDEPYTDFDGTRVYSPPEWISR-HQYHALPATVWSLGILLYDMVCGDIPFERDQ------------------EILE 247 (312)
T ss_dssp CEECCSSCBCCCCSCTTTSCHHHHHH-SCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------------HHHH
T ss_pred hhhcccCcccccCCcccccCceeeec-CCCCCccchHHHHHHHHHHHHHCCCCCCChH------------------HHhh
Confidence 9876543 4567889999997653 2334569999999999999999999995310 1111
Q ss_pred hhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 589 EEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
.. ..... .....+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~---------~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 248 AE---------LHFPA---HVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp TC---------CCCCT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hc---------cCCcc---cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 10 00011 12235778888999999999999999975
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.3e-36 Score=307.42 Aligned_cols=228 Identities=15% Similarity=0.126 Sum_probs=178.2
Q ss_pred hcccCcCCeEEEEEEEEc-CCcEEEEEEcccCCcc---hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEeecCC
Q 005880 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPN 440 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 440 (672)
.+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++.+++||||+++++++.+++..|+||||+++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 115 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRG 115 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCE
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCC
Confidence 368999999999999975 4899999999764332 347889999999999999999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCCC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV 520 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 520 (672)
++|.+++... ....++.+|+.|+++||+||| +.+|+||||||+||+++.++.+||+++|
T Consensus 116 ~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH----~~givH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 116 GSLQEVADTS-------PSPVGAIRAMQSLAAAADAAH----RAGVALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp EEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred CCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHH----HCCCccCCCCcccEEEcCCCCEEEEecc----------
Confidence 9999999532 355678899999999999999 7899999999999999999999998554
Q ss_pred CCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhh
Q 005880 521 PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLEL 600 (672)
Q Consensus 521 ~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (672)
|++ .++.++|||||||++|||+||+.||............. .........+..
T Consensus 175 -----~~~---------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 227 (286)
T 3uqc_A 175 -----TMP---------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE-------------RDTAGQPIEPAD 227 (286)
T ss_dssp -----CCT---------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC-------------BCTTSCBCCHHH
T ss_pred -----ccC---------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH-------------HHhccCCCChhh
Confidence 333 35789999999999999999999998654322110000 000000000000
Q ss_pred ccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHhcCC
Q 005880 601 MRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVE 645 (672)
Q Consensus 601 ~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 645 (672)
.... ....+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 228 -~~~~---~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 228 -IDRD---IPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp -HCTT---SCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred -cccC---CCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 0011 22357788889999999999 9999999999987644
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.5e-37 Score=343.37 Aligned_cols=263 Identities=21% Similarity=0.280 Sum_probs=197.4
Q ss_pred HhcccCcCCeEEEEEEEE-cCCcEEEEEEcccC-CcchHHHHHHHHHHHcCCCCCceeeeEEEEEc------CCeEEEEE
Q 005880 364 SAEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA------REEKLLVS 435 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~~~lv~ 435 (672)
+.+.||+|+||.||+|.. .+|+.||||+++.. .....+.+.+|++++++++||||+++++++.. .+..++||
T Consensus 18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVm 97 (676)
T 3qa8_A 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM 97 (676)
T ss_dssp CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEE
Confidence 457899999999999996 46899999998754 33346779999999999999999999998765 66779999
Q ss_pred eecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCc---EEEeccCCC
Q 005880 436 EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN---ARVSDFGLS 512 (672)
Q Consensus 436 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~---~kl~DfG~a 512 (672)
||+++|+|.+++..... ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++
T Consensus 98 Ey~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLH----s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 98 EYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLH----ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp ECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHH----HTTBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 99999999999986432 235889999999999999999999 789999999999999997665 999999999
Q ss_pred ccCCCC----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 005880 513 IFAPPS----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVR 588 (672)
Q Consensus 513 ~~~~~~----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (672)
...... ...++..|+|||++. +..++.++|||||||++|||++|+.||..... ...|......
T Consensus 172 ~~~~~~~~~~~~~gt~~Y~APE~l~--~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----------~~~~~~~i~~ 238 (676)
T 3qa8_A 172 KELDQGELCTEFVGTLQYLAPELLE--QKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----------PVQWHGKVRE 238 (676)
T ss_dssp CBTTSCCCCCCCCSCCTTCSSCSSC--CSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----------HHHSSTTCC-
T ss_pred cccccccccccccCCcccCChHHhc--cCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----------hhhhhhhhhc
Confidence 876543 346788999999764 56789999999999999999999999964311 0111000000
Q ss_pred hhc----cccc------cchhhccc-cChHHHHHHHHHHHHhccCCCCCCCCCHHH-----HHHHHHHHhcCC
Q 005880 589 EEW----TAEV------FDLELMRY-KDIEEEMVGLLQVAMACTSASPDQRPNMSH-----VVKLIEELRGVE 645 (672)
Q Consensus 589 ~~~----~~~~------~d~~~~~~-~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e-----vl~~L~~i~~~~ 645 (672)
... .... +....... .........+.+++.+||..||++|||+.| ..+.++.+....
T Consensus 239 ~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 239 KSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp -----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred ccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 000 0000 00000000 011224456888999999999999999988 567777776544
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.2e-36 Score=342.06 Aligned_cols=232 Identities=18% Similarity=0.247 Sum_probs=186.4
Q ss_pred hcccCcCCeEEEEEEEEc--CCcEEEEEEcccCC-cchHHHHHHHHHHHcCCCCCceeeeEEEEEcCCe-----EEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVLD--DGSVVAVKRLKDAS-IGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREE-----KLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-----~~lv~e 436 (672)
.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++.+++||||+++++++...+. .|+|||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E 164 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVME 164 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEE
Confidence 478999999999999975 68999999987543 2345678999999999999999999999987665 699999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|+++++|.+++.. .+++.+++.|+.|+++||.||| +.+|+||||||+||+++.+ .+||+|||+++...
T Consensus 165 ~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH----~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 165 YVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLH----SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp CCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred eCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHH----HCCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 9999999887753 4899999999999999999999 7899999999999999986 89999999998766
Q ss_pred CC-CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccc
Q 005880 517 PS-TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEV 595 (672)
Q Consensus 517 ~~-~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (672)
.. ...+|.+|+|||++.. .++.++|||||||++|||++|..||....... +.
T Consensus 233 ~~~~~~gt~~y~aPE~~~~---~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~---------~~--------------- 285 (681)
T 2pzi_A 233 SFGYLYGTPGFQAPEIVRT---GPTVATDIYTVGRTLAALTLDLPTRNGRYVDG---------LP--------------- 285 (681)
T ss_dssp CCSCCCCCTTTSCTTHHHH---CSCHHHHHHHHHHHHHHHHSCCCEETTEECSS---------CC---------------
T ss_pred cCCccCCCccccCHHHHcC---CCCCceehhhhHHHHHHHHhCCCCCccccccc---------cc---------------
Confidence 54 5568999999998753 34889999999999999999998875421110 00
Q ss_pred cchhhccccChHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHH
Q 005880 596 FDLELMRYKDIEEEMVGLLQVAMACTSASPDQRP-NMSHVVKLIEEL 641 (672)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-t~~evl~~L~~i 641 (672)
...........+.+++.+||+.||++|| +++++.+.|..+
T Consensus 286 ------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 286 ------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp ------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 0000011224577899999999999999 567777777665
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=8.4e-36 Score=307.58 Aligned_cols=223 Identities=20% Similarity=0.287 Sum_probs=172.6
Q ss_pred cccCcCCeEEEEEEEE-cCCcEEEEEEcccCCcchHHHHHHHHHHH-cCCCCCceeeeEEEEEc----CCeEEEEEeecC
Q 005880 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVL-GRLRHPNLVGLKAYYFA----REEKLLVSEYMP 439 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~~lv~e~~~ 439 (672)
+.||+|+||.||+|.. .+++.||||+++. ...+.+|++++ +..+||||+++++++.. ....++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 6799999999999996 4689999999863 34677888887 55699999999999876 667899999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCC---CCcEEEeccCCCccCC
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK---TGNARVSDFGLSIFAP 516 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~---~~~~kl~DfG~a~~~~ 516 (672)
+|+|.+++.... ...+++..++.++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++....
T Consensus 99 ~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 99 GGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp SCBHHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred CCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 999999998653 246999999999999999999999 789999999999999998 7889999999886432
Q ss_pred CCCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhcccccc
Q 005880 517 PSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVF 596 (672)
Q Consensus 517 ~~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (672)
+..++.++|||||||++|||++|+.||......... ........
T Consensus 172 -------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-----------------~~~~~~~~ 215 (299)
T 3m2w_A 172 -------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----------------PGMKTRIR 215 (299)
T ss_dssp -------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------------CCSCCSSC
T ss_pred -------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----------------HHHHHHHh
Confidence 245788999999999999999999999654321100 00000000
Q ss_pred chhhccc-cChHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 005880 597 DLELMRY-KDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636 (672)
Q Consensus 597 d~~~~~~-~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 636 (672)
....... .........+.+++.+||+.||++|||+.|+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 216 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp TTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000000 000112345788888999999999999999987
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1e-34 Score=313.01 Aligned_cols=237 Identities=15% Similarity=0.148 Sum_probs=173.0
Q ss_pred hcccCcCCeEEEEEEEE-cCCcEEEEEEcccCCc---chHHHHHHHHHHHcCCCC-Cce---------ee----------
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRH-PNL---------VG---------- 420 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h-~ni---------v~---------- 420 (672)
.+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|+.++..++| +|. +.
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 36899999999999994 5799999999873322 235789999999999987 221 11
Q ss_pred --eEEEEEc-----CCeEEEEEeecCCCChhHHhhcCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCC
Q 005880 421 --LKAYYFA-----REEKLLVSEYMPNGSLFWLLHGNR--GPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNI 491 (672)
Q Consensus 421 --l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dl 491 (672)
+..++.. ....+++|+++ +++|.+++.... ......+++..++.|+.|+++||+||| +.+|+||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~iiHrDi 237 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH----HYGLVHTYL 237 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH----HTTEECSCC
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCc
Confidence 1111111 12356777766 789999885210 011345889999999999999999999 789999999
Q ss_pred CCCCEEeCCCCcEEEeccCCCccCCCC--CCCCCCcccCCCcccc--------CCCCCCchhHHHHHHHHHHHHHhCCCC
Q 005880 492 KSTNVLLDKTGNARVSDFGLSIFAPPS--TVPRSNGYRAPELSSS--------DGRKQSQKSDVYSFGVLLLELLTGKCP 561 (672)
Q Consensus 492 kp~NIll~~~~~~kl~DfG~a~~~~~~--~~~~t~~y~aPE~l~~--------~~~~~~~~~DV~S~Gvvl~el~tg~~P 561 (672)
||+|||++.++.+||+|||+++..... ...+ ..|+|||++.. .+..++.++|||||||++|||+||+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998766543 4556 89999997731 344678899999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 005880 562 SVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVV 635 (672)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 635 (672)
|....... ............. ..+.+++.+||+.||++|||+.|++
T Consensus 317 f~~~~~~~-------------------------~~~~~~~~~~~~~---~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 317 NTDDAALG-------------------------GSEWIFRSCKNIP---QPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp CCTTGGGS-------------------------CSGGGGSSCCCCC---HHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CCCcchhh-------------------------hHHHHHhhcccCC---HHHHHHHHHHccCChhhCcCHHHHH
Confidence 96542211 0001111111122 3577888899999999999977664
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.3e-35 Score=308.42 Aligned_cols=240 Identities=17% Similarity=0.184 Sum_probs=181.1
Q ss_pred HHHhcccCcCCeEEEEEEEEcCCcEEEEEEcccCC--------cchHHHHHHHHHHHcCCC---------CCceeeeEEE
Q 005880 362 RASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAS--------IGGKREFEQHMEVLGRLR---------HPNLVGLKAY 424 (672)
Q Consensus 362 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------h~niv~l~~~ 424 (672)
+...+.||+|+||.||+|+. +|+.||||+++... ....+.+.+|++++++++ ||||+++.+.
T Consensus 22 y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~ 100 (336)
T 2vuw_A 22 LQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSV 100 (336)
T ss_dssp HHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEE
T ss_pred chheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcce
Confidence 45678999999999999998 68999999997542 123477889999888875 8888888776
Q ss_pred EE------------------------------cCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHH
Q 005880 425 YF------------------------------AREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474 (672)
Q Consensus 425 ~~------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L 474 (672)
+. +.+..++||||+++|++.+.+.. ..+++..+..|+.|+++||
T Consensus 101 ~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 101 HCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHHH
T ss_pred eEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHHH
Confidence 53 26789999999999977666643 2489999999999999999
Q ss_pred HHHHhhCCCCCcEecCCCCCCEEeCCCC--------------------cEEEeccCCCccCCCCCCCCCCcccCCCcccc
Q 005880 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTG--------------------NARVSDFGLSIFAPPSTVPRSNGYRAPELSSS 534 (672)
Q Consensus 475 ~~LH~~~~~~~iiH~Dlkp~NIll~~~~--------------------~~kl~DfG~a~~~~~~~~~~t~~y~aPE~l~~ 534 (672)
+|||+ +.+|+||||||+|||++.++ .+||+|||+++........+|..|+|||++..
T Consensus 175 ~~lH~---~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 175 AVAEA---SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHH---HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCC
T ss_pred HHHHH---hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcC
Confidence 99992 25899999999999999887 89999999999887777789999999998753
Q ss_pred CCCCCCchhHHHHHHHH-HHHHHhCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhhhccccccchhhccccChHHHHHHH
Q 005880 535 DGRKQSQKSDVYSFGVL-LLELLTGKCPSVIDGGGAGMGCGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGL 613 (672)
Q Consensus 535 ~~~~~~~~~DV~S~Gvv-l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 613 (672)
.. +.++||||+|++ .+++++|..||.. ..|.......-........ ............++
T Consensus 252 --~~-~~~~Diwsl~~~~~~~~~~g~~p~~~---------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 252 --DG-DYQFDIYRLMKKENNNRWGEYHPYSN---------------VLWLHYLTDKMLKQMTFKT-KCNTPAMKQIKRKI 312 (336)
T ss_dssp --CS-SHHHHHHHHHHHHHTTCTTSCCTHHH---------------HHHHHHHHHHHHHTCCCSS-CCCSHHHHHHHHHH
T ss_pred --CC-ccceehhhhhCCCCcccccccCCCcc---------------hhhhhHHHHhhhhhhccCc-ccchhhhhhcCHHH
Confidence 23 889999998777 7889999999742 1222211111000000000 00011123455678
Q ss_pred HHHHHhccCCCCCCCCCHHHHH
Q 005880 614 LQVAMACTSASPDQRPNMSHVV 635 (672)
Q Consensus 614 ~~li~~Cl~~dP~~RPt~~evl 635 (672)
.+++.+||+.| |+.|++
T Consensus 313 ~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHhccC-----CHHHHH
Confidence 89999999976 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=4.7e-30 Score=286.36 Aligned_cols=181 Identities=20% Similarity=0.102 Sum_probs=128.6
Q ss_pred ccCcCCeEEEEEEE-EcCCcEEEEEEcccCC----------cchHHHHHHHHHHHcCC-CCCceeeeEEEEEcCCeEEEE
Q 005880 367 MLGKGGFGTAYKAV-LDDGSVVAVKRLKDAS----------IGGKREFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLV 434 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 434 (672)
..+.|++|.++.++ .--|+.+|||++.... ....++|.+|+++|+++ .|+||+++++++.++++.|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 46677777777665 3458999999986432 12346799999999999 799999999999999999999
Q ss_pred EeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 435 SEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 435 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
|||++|++|.++|.... +++.. +|+.||++||+|+| +.|||||||||+|||++++|++||+|||+|+.
T Consensus 321 MEyv~G~~L~d~i~~~~-----~l~~~---~I~~QIl~AL~ylH----~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~ 388 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-----EIDRE---KILGSLLRSLAALE----KQGFWHDDVRPWNVMVDARQHARLIDFGSIVT 388 (569)
T ss_dssp EECCCSEEHHHHHHTTC-----CCCHH---HHHHHHHHHHHHHH----HTTCEESCCCGGGEEECTTSCEEECCCTTEES
T ss_pred EecCCCCcHHHHHHhCC-----CCCHH---HHHHHHHHHHHHHH----HCCceeccCchHhEEECCCCCEEEeecccCee
Confidence 99999999999998543 45554 58899999999999 88999999999999999999999999999987
Q ss_pred CCCC-----CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 005880 515 APPS-----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPS 562 (672)
Q Consensus 515 ~~~~-----~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~ 562 (672)
.... ...||++|+|||++. +.+..++|+||+|++++++.++..++
T Consensus 389 ~~~~~~~~~t~vGTp~YmAPE~l~---g~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 389 TPQDCSWPTNLVQSFFVFVNELFA---ENKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp CC---CCSHHHHHHHHHHHHHHC--------------------CCCCTTHHHH
T ss_pred CCCCCccccCceechhhccHHHhC---CCCCCcccccccccchhhhccccchh
Confidence 6543 234688999999874 35677899999999988876665443
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.95 E-value=1.5e-28 Score=254.78 Aligned_cols=183 Identities=32% Similarity=0.617 Sum_probs=167.1
Q ss_pred CCChhhHHHHHHHHhcCCCCCCCCCCCCCCCCCc--ccceEEcC----CcEeEEEecCCCccc--CCC-CCCCCCCccEE
Q 005880 23 ASTSPDLNALLDFKASSDEANKLTTWNSTSDPCS--WTGVSCLQ----NRVSHLVLENLQLSG--SLQ-PLTSLTQLRVL 93 (672)
Q Consensus 23 ~~~~~d~~all~~k~~~~~~~~~~~W~~~~~~c~--w~gv~c~~----~~v~~L~l~~~~l~~--~~~-~l~~l~~L~~L 93 (672)
.|.+.|.+||++||+++.++..+.+|+.+++||. |.||+|.. ++|+.|+|++|++++ .++ .+.++++|++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L 81 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCee
Confidence 4778999999999999876667889988889998 99999975 799999999999998 444 49999999999
Q ss_pred Eccc-CCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcc
Q 005880 94 SLKY-NRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRF 171 (672)
Q Consensus 94 ~L~~-N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l 171 (672)
+|++ |.+++.+| .|+++++|++|+|++|++++.+|..|+++++|++|+|++|+|++.+|..+.++++|++|+|++|++
T Consensus 82 ~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 161 (313)
T 1ogq_A 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI 161 (313)
T ss_dssp EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCC
T ss_pred eCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcc
Confidence 9995 99999888 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCC--CCCCC-CCCeeeccCCcCCCCCCCcCCCCC
Q 005880 172 SGPIT--GLDLR-NLQDFNVSGNHLSGQIPKSLSGFP 205 (672)
Q Consensus 172 ~~~~~--~~~l~-~L~~l~l~~N~l~g~~p~~l~~~~ 205 (672)
++.++ +..+. +|+.|++++|+++|.+|..+..+.
T Consensus 162 ~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~ 198 (313)
T 1ogq_A 162 SGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN 198 (313)
T ss_dssp EEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC
T ss_pred cCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc
Confidence 97444 56777 999999999999999998887654
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.93 E-value=4.4e-26 Score=265.14 Aligned_cols=188 Identities=29% Similarity=0.399 Sum_probs=151.4
Q ss_pred cCCChhhHHHHHHHHhcCCCCCCCCCCCCCCCCCcccceEEcCCcEeEEEecCCCcccC---C-----------------
Q 005880 22 KASTSPDLNALLDFKASSDEANKLTTWNSTSDPCSWTGVSCLQNRVSHLVLENLQLSGS---L----------------- 81 (672)
Q Consensus 22 ~~~~~~d~~all~~k~~~~~~~~~~~W~~~~~~c~w~gv~c~~~~v~~L~l~~~~l~~~---~----------------- 81 (672)
+++...|++||++||+++.++..+++|+.++|||+|.||+|+.++|+.|+|+++.+.|. +
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~ 86 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSN 86 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTT
T ss_pred ccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCCcC
Confidence 34456799999999999865557899998889999999999999999999999999885 2
Q ss_pred -------CCCCCCCCccEEEcccCCCCCCCC---CCCcccccceeeccccccCCCCChhh-hccCCCCeEecccCccccc
Q 005880 82 -------QPLTSLTQLRVLSLKYNRFTGPVP---SLSNLTALKLLFLSHNNFNGEFPDSV-SSLFRLYRLDLSFNNFSGQ 150 (672)
Q Consensus 82 -------~~l~~l~~L~~L~L~~N~l~~~~p---~~~~l~~L~~L~l~~N~l~g~~p~~~-~~l~~L~~L~l~~N~l~g~ 150 (672)
+.++.+++|++|+|++|.++|.+| .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|++++.
T Consensus 87 ~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 166 (768)
T 3rgz_A 87 SHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 166 (768)
T ss_dssp SCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEE
T ss_pred CCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCc
Confidence 246777888888888888887655 57788888888888888887777766 7788888888888888877
Q ss_pred cchh---hcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcccc
Q 005880 151 IPLT---VNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFT 210 (672)
Q Consensus 151 ~p~~---~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~ 210 (672)
.|.. +.++++|++|++++|++++..+...+++|++|++++|++++.+|. +..++.+...
T Consensus 167 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L 228 (768)
T 3rgz_A 167 NVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHL 228 (768)
T ss_dssp THHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEE
T ss_pred CChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEE
Confidence 7766 778888888888888888877777888888888888888887776 6666655443
No 254
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=2.2e-26 Score=255.29 Aligned_cols=178 Identities=14% Similarity=0.153 Sum_probs=143.8
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc--------hHHHHHHHHHHHcCCCCCceeeeEEEEEcCCeEEEEEe
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG--------GKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 436 (672)
.+.||+|+||.||+|... ++.+|+|+....... ..+++.+|++++++++||||+++..++...++.++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 468999999999999544 788899886432211 13458999999999999999977777777888899999
Q ss_pred ecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCC
Q 005880 437 YMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516 (672)
Q Consensus 437 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 516 (672)
|+++|+|.+++.. +..++.|+++||+||| +.+|+||||||+|||+++ ++||+|||+++...
T Consensus 420 ~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH----~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 420 YINGKLAKDVIED-------------NLDIAYKIGEIVGKLH----KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp CCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHH----HTTEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred CCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHH----HCcCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 9999999999864 4589999999999999 789999999999999999 99999999998876
Q ss_pred CC------------CCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 005880 517 PS------------TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPS 562 (672)
Q Consensus 517 ~~------------~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~ 562 (672)
.. ...+|+.|+|||++......|+.++|+|+..+-..+-+.++.+|
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 53 34578899999987643345778889999999999988888776
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.90 E-value=1.2e-24 Score=247.27 Aligned_cols=183 Identities=25% Similarity=0.335 Sum_probs=154.1
Q ss_pred hhhHHHHHHHHhcCCCCCC---------CCCCCCCCCCCcc---cceEEcC-CcEeEEEecCCCcccCCCC-CCCCCCcc
Q 005880 26 SPDLNALLDFKASSDEANK---------LTTWNSTSDPCSW---TGVSCLQ-NRVSHLVLENLQLSGSLQP-LTSLTQLR 91 (672)
Q Consensus 26 ~~d~~all~~k~~~~~~~~---------~~~W~~~~~~c~w---~gv~c~~-~~v~~L~l~~~~l~~~~~~-l~~l~~L~ 91 (672)
..|+.||.+|+++++++++ ..+|+.+++||.| .||+|+. ++|+.|+|+++++.|.+++ +++|++|+
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L~ 108 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELE 108 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTCC
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccce
Confidence 4699999999998765432 2479988999999 9999965 7999999999999997766 99999999
Q ss_pred EEEcccCC------------------------------------------------------------------------
Q 005880 92 VLSLKYNR------------------------------------------------------------------------ 99 (672)
Q Consensus 92 ~L~L~~N~------------------------------------------------------------------------ 99 (672)
+|+|++|.
T Consensus 109 ~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l 188 (636)
T 4eco_A 109 VLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQI 188 (636)
T ss_dssp EEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTT
T ss_pred EEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhhh
Confidence 99999884
Q ss_pred ------CCCCCC-CCCcccccceeeccccccCCC-----------------CChhhh--ccCCCCeEecccCccccccch
Q 005880 100 ------FTGPVP-SLSNLTALKLLFLSHNNFNGE-----------------FPDSVS--SLFRLYRLDLSFNNFSGQIPL 153 (672)
Q Consensus 100 ------l~~~~p-~~~~l~~L~~L~l~~N~l~g~-----------------~p~~~~--~l~~L~~L~l~~N~l~g~~p~ 153 (672)
++| +| .++++++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.|.+|.
T Consensus 189 ~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~ 267 (636)
T 4eco_A 189 GQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPT 267 (636)
T ss_dssp TCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCT
T ss_pred ccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChH
Confidence 345 45 788999999999999999986 999998 999999999999999999999
Q ss_pred hhcCCCccCeeeccCCc-ccC-cCC--CCCC------CCCCeeeccCCcCCCCCCC--cCCCCCCcccc
Q 005880 154 TVNHLTHLLTLKLEANR-FSG-PIT--GLDL------RNLQDFNVSGNHLSGQIPK--SLSGFPDSAFT 210 (672)
Q Consensus 154 ~~~~l~~L~~L~l~~N~-l~~-~~~--~~~l------~~L~~l~l~~N~l~g~~p~--~l~~~~~~~~~ 210 (672)
.|+++++|++|+|++|+ ++| .+| ...+ ++|++|++++|+++ .+|. .+..++.+...
T Consensus 268 ~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L 335 (636)
T 4eco_A 268 FLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGML 335 (636)
T ss_dssp TTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEE
T ss_pred HHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEE
Confidence 99999999999999998 887 454 2333 78888899888888 8888 77766655443
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=1.5e-24 Score=251.41 Aligned_cols=181 Identities=24% Similarity=0.328 Sum_probs=155.3
Q ss_pred ChhhHHHHHHHHhcCCCCCCCCCCCCCC-----CC--Ccc------------cceEEcC-CcEeEEEecCCCcccCCCC-
Q 005880 25 TSPDLNALLDFKASSDEANKLTTWNSTS-----DP--CSW------------TGVSCLQ-NRVSHLVLENLQLSGSLQP- 83 (672)
Q Consensus 25 ~~~d~~all~~k~~~~~~~~~~~W~~~~-----~~--c~w------------~gv~c~~-~~v~~L~l~~~~l~~~~~~- 83 (672)
...|+.||++||++++++ +|+.++ +| |+| .||+|+. ++|+.|+|++|+|.|.+++
T Consensus 267 ~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~~ 342 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDA 342 (876)
T ss_dssp HHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECGG
T ss_pred chHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCchH
Confidence 346999999999998754 786543 66 999 9999984 8999999999999998776
Q ss_pred CCCCCCccEEEc-ccCCCCCC-----------------------------------------------------------
Q 005880 84 LTSLTQLRVLSL-KYNRFTGP----------------------------------------------------------- 103 (672)
Q Consensus 84 l~~l~~L~~L~L-~~N~l~~~----------------------------------------------------------- 103 (672)
|++|++|++|+| ++|.++|.
T Consensus 343 l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~ 422 (876)
T 4ecn_A 343 IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSR 422 (876)
T ss_dssp GGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCC
T ss_pred HhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccc
Confidence 999999999999 77765443
Q ss_pred -----------------CC-CCCcccccceeeccccccCC-----------------CCChhhh--ccCCCCeEecccCc
Q 005880 104 -----------------VP-SLSNLTALKLLFLSHNNFNG-----------------EFPDSVS--SLFRLYRLDLSFNN 146 (672)
Q Consensus 104 -----------------~p-~~~~l~~L~~L~l~~N~l~g-----------------~~p~~~~--~l~~L~~L~l~~N~ 146 (672)
+| .|++|++|++|+|++|+|+| .+|..++ ++++|+.|+|++|+
T Consensus 423 l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~ 502 (876)
T 4ecn_A 423 ISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCP 502 (876)
T ss_dssp CCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCT
T ss_pred cchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCC
Confidence 55 78899999999999999998 3999988 99999999999999
Q ss_pred cccccchhhcCCCccCeeeccCCc-ccC-cCC---------CCCCCCCCeeeccCCcCCCCCCC--cCCCCCCcccc
Q 005880 147 FSGQIPLTVNHLTHLLTLKLEANR-FSG-PIT---------GLDLRNLQDFNVSGNHLSGQIPK--SLSGFPDSAFT 210 (672)
Q Consensus 147 l~g~~p~~~~~l~~L~~L~l~~N~-l~~-~~~---------~~~l~~L~~l~l~~N~l~g~~p~--~l~~~~~~~~~ 210 (672)
+.|.+|..|+++++|+.|+|++|+ |+| .+| ...+++|+.|+|++|+|+ .+|. .+..++.+..+
T Consensus 503 l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L 578 (876)
T 4ecn_A 503 NMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLL 578 (876)
T ss_dssp TCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEE
T ss_pred CCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEE
Confidence 999999999999999999999998 887 443 235669999999999999 8998 77777665543
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.89 E-value=6.6e-24 Score=221.22 Aligned_cols=186 Identities=19% Similarity=0.280 Sum_probs=155.7
Q ss_pred CCChhhHHHHHHHHhcC--CCCCCCCCC----CCCCCCCcccceEEc----------CCcEeEEEecCCCcccCCCCCCC
Q 005880 23 ASTSPDLNALLDFKASS--DEANKLTTW----NSTSDPCSWTGVSCL----------QNRVSHLVLENLQLSGSLQPLTS 86 (672)
Q Consensus 23 ~~~~~d~~all~~k~~~--~~~~~~~~W----~~~~~~c~w~gv~c~----------~~~v~~L~l~~~~l~~~~~~l~~ 86 (672)
++..+|++||++||+++ +..+.+.+| ....++|.|.|+.|. ..+|+.|+|++|+++..++.++.
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~~lp~~l~~ 102 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLPQFPDQAFR 102 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCSSCCSCGGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCchhcChhhhh
Confidence 34567999999999975 334456789 445689999999995 27999999999999977777889
Q ss_pred CCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcC---------
Q 005880 87 LTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNH--------- 157 (672)
Q Consensus 87 l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~--------- 157 (672)
+++|++|+|++|.++..+..++++++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..++.
T Consensus 103 l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp GTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 99999999999999944448999999999999999999 89999999999999999999999899988765
Q ss_pred CCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcccc
Q 005880 158 LTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFT 210 (672)
Q Consensus 158 l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~ 210 (672)
+++|++|+|++|+|+. +..+..+++|++|+|++|+++ .+|..+..++.+...
T Consensus 182 l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEEL 234 (328)
T ss_dssp STTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEE
T ss_pred CCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEE
Confidence 8999999999999985 333567889999999999998 477667666655443
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.86 E-value=2.2e-22 Score=233.91 Aligned_cols=161 Identities=34% Similarity=0.570 Sum_probs=137.9
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-C------------------------------------
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-S------------------------------------ 106 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~------------------------------------ 106 (672)
.+++.|+|++|.++|.++. ++.+++|++|+|++|.++|.+| .
T Consensus 514 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (768)
T 3rgz_A 514 ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNL 593 (768)
T ss_dssp TTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEE
T ss_pred CCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccc
Confidence 4567777777777765554 7777888888888887776655 1
Q ss_pred ----------------------------------CCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccc
Q 005880 107 ----------------------------------LSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIP 152 (672)
Q Consensus 107 ----------------------------------~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 152 (672)
++++++|++|||++|+++|.+|..|+++++|+.|+|++|+|+|.+|
T Consensus 594 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip 673 (768)
T 3rgz_A 594 LEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673 (768)
T ss_dssp EECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred cccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCC
Confidence 3345778999999999999999999999999999999999999999
Q ss_pred hhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCCC--cCCCCCCccccccccccCCCCccccc
Q 005880 153 LTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIPK--SLSGFPDSAFTQNAALCGSPMQACKT 225 (672)
Q Consensus 153 ~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p~--~l~~~~~~~~~~n~~lc~~~~~~c~~ 225 (672)
..|+++++|+.|+|++|+++|.+| +..+++|++|||++|+|+|.||. .+..++...|.||+++||.|+..|..
T Consensus 674 ~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~ 750 (768)
T 3rgz_A 674 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCS
T ss_pred hHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCC
Confidence 999999999999999999999665 56899999999999999999996 47788899999999999999988864
No 259
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=7.8e-23 Score=207.96 Aligned_cols=139 Identities=16% Similarity=0.187 Sum_probs=113.2
Q ss_pred hcccCcCCeEEEEEEEEcCCcEEEEEEcccCCc------------------chHHHHHHHHHHHcCCCCCceeeeEEEEE
Q 005880 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI------------------GGKREFEQHMEVLGRLRHPNLVGLKAYYF 426 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 426 (672)
.+.||+|+||.||+|...+|+.||||.++.... .....+.+|++++++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 378999999999999997799999999964321 13457899999999999 4 56665443
Q ss_pred cCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEE
Q 005880 427 AREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARV 506 (672)
Q Consensus 427 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl 506 (672)
.+..++||||+++|+|.+ +.. .....++.|+++||.||| +.+|+||||||+|||++ ++.+||
T Consensus 172 -~~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH----~~giiHrDlkp~NILl~-~~~vkl 233 (282)
T 1zar_A 172 -WEGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFY----HRGIVHGDLSQYNVLVS-EEGIWI 233 (282)
T ss_dssp -EETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEEE-TTEEEE
T ss_pred -ccceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHH----HCCCEeCCCCHHHEEEE-CCcEEE
Confidence 356699999999999988 421 124479999999999999 78999999999999999 999999
Q ss_pred eccCCCccCCCCCCCCCCcccCCCcc
Q 005880 507 SDFGLSIFAPPSTVPRSNGYRAPELS 532 (672)
Q Consensus 507 ~DfG~a~~~~~~~~~~t~~y~aPE~l 532 (672)
+|||+++.. ..|.|||++
T Consensus 234 ~DFG~a~~~--------~~~~a~e~l 251 (282)
T 1zar_A 234 IDFPQSVEV--------GEEGWREIL 251 (282)
T ss_dssp CCCTTCEET--------TSTTHHHHH
T ss_pred EECCCCeEC--------CCCCHHHHH
Confidence 999998743 457889865
No 260
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.85 E-value=5.9e-21 Score=191.04 Aligned_cols=152 Identities=24% Similarity=0.245 Sum_probs=134.0
Q ss_pred cEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 66 RVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
.++.|+|++|++++..+. +.++++|++|+|++|+|++.++ .|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 578999999999988775 8999999999999999999888 68999999999999999997777888999999999999
Q ss_pred cCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCCCcCCCCC---CccccccccccC
Q 005880 144 FNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIPKSLSGFP---DSAFTQNAALCG 217 (672)
Q Consensus 144 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p~~l~~~~---~~~~~~n~~lc~ 217 (672)
+|+|++..+..|.++++|++|+|++|+|++..+ +..+++|++|+|++|+|++..|..+..++ .+.+.+|++.|.
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 999997666678999999999999999998443 56899999999999999976666666554 555668998887
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=2e-20 Score=184.42 Aligned_cols=152 Identities=24% Similarity=0.256 Sum_probs=99.6
Q ss_pred CCCCCCCCCCCcccceEEcC-----------CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCccc
Q 005880 45 LTTWNSTSDPCSWTGVSCLQ-----------NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLT 111 (672)
Q Consensus 45 ~~~W~~~~~~c~w~gv~c~~-----------~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~ 111 (672)
..-|..+.+.|+|++|.|.. .+++.|+|++|.+++..+. |..+++|++|+|++|+|++.++ .|.+++
T Consensus 9 ~~~~~~~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 88 (229)
T 3e6j_A 9 HSAACPSQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLT 88 (229)
T ss_dssp --CCCCTTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhccCCCCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCC
Confidence 34465667889999999964 2456677777777666444 6666677777777777765555 456667
Q ss_pred ccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcC--CCCCCCCCCeeecc
Q 005880 112 ALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPI--TGLDLRNLQDFNVS 189 (672)
Q Consensus 112 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~l~~L~~l~l~ 189 (672)
+|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|+|++.. .+..+++|+.|+|+
T Consensus 89 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 167 (229)
T 3e6j_A 89 QLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLF 167 (229)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEee
Confidence 7777777777776544555666667777777777776 66666666777777777777766622 23456666777777
Q ss_pred CCcCCCCC
Q 005880 190 GNHLSGQI 197 (672)
Q Consensus 190 ~N~l~g~~ 197 (672)
+|.+.+..
T Consensus 168 ~N~~~c~c 175 (229)
T 3e6j_A 168 GNPWDCEC 175 (229)
T ss_dssp TSCBCTTB
T ss_pred CCCccCCc
Confidence 77666443
No 262
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.83 E-value=7.6e-20 Score=185.08 Aligned_cols=129 Identities=24% Similarity=0.280 Sum_probs=79.9
Q ss_pred cEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 66 RVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
.++.|+|++|++++.++. |.++++|++|+|++|+++..++ .|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 467788888888776653 7777778888887777776655 35667777777777777765444555666666666666
Q ss_pred cCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCC
Q 005880 144 FNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLS 194 (672)
Q Consensus 144 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~ 194 (672)
+|+|++..|..|.++++|++|+|++|+|++..+ +..+++|+.|+|++|+++
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 170 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK 170 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCc
Confidence 666665555555555555555555555554221 233444444444444444
No 263
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.82 E-value=8.2e-21 Score=196.52 Aligned_cols=158 Identities=31% Similarity=0.513 Sum_probs=110.7
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCccc-ccceeeccccccCCCCChhhhccCCCCeEe
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLT-ALKLLFLSHNNFNGEFPDSVSSLFRLYRLD 141 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~-~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 141 (672)
.+++.|+|++|.+++.++. +..+++|++|+|++|++++.+| .+++++ +|++|+|++|+++|.+|..++.+. |+.|+
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~ 203 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVD 203 (313)
T ss_dssp TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEE
T ss_pred CCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEE
Confidence 5788899999998876655 8888888899999888887777 777777 888888888888877777777765 77777
Q ss_pred cccCccccccchhhcCCCccCeeeccCCcccC-----------------------cCC--CCCCCCCCeeeccCCcCCCC
Q 005880 142 LSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-----------------------PIT--GLDLRNLQDFNVSGNHLSGQ 196 (672)
Q Consensus 142 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-----------------------~~~--~~~l~~L~~l~l~~N~l~g~ 196 (672)
|++|++++.+|..+.++++|+.|+|++|++++ .++ +..+++|+.|+|++|+|+|.
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 283 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEE
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCccccc
Confidence 77777776666666666666666666555554 222 23455666666666666666
Q ss_pred CCCc--CCCCCCccccccccccCCCCccc
Q 005880 197 IPKS--LSGFPDSAFTQNAALCGSPMQAC 223 (672)
Q Consensus 197 ~p~~--l~~~~~~~~~~n~~lc~~~~~~c 223 (672)
+|.. +.++..+.+.+|+++||.|++.|
T Consensus 284 ip~~~~l~~L~~l~l~~N~~lc~~p~~~C 312 (313)
T 1ogq_A 284 IPQGGNLQRFDVSAYANNKCLCGSPLPAC 312 (313)
T ss_dssp CCCSTTGGGSCGGGTCSSSEEESTTSSCC
T ss_pred CCCCccccccChHHhcCCCCccCCCCCCC
Confidence 6643 33344555667888888777666
No 264
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=2.2e-19 Score=174.09 Aligned_cols=145 Identities=26% Similarity=0.252 Sum_probs=116.0
Q ss_pred CCcccceEEcC-----------CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccc
Q 005880 54 PCSWTGVSCLQ-----------NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSH 120 (672)
Q Consensus 54 ~c~w~gv~c~~-----------~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~ 120 (672)
.|.|.+|.|.. .+++.|+|++|++++.++. +..+++|++|+|++|++++.++ .|.++++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 37899999964 3578888888888877665 7788888888888888887766 468888888888888
Q ss_pred cccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCC
Q 005880 121 NNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 121 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p 198 (672)
|++++..+..|.++++|++|+|++|+|++..+..+.++++|+.|+|++|+|++..+ +..+++|+.|++++|.+.+..|
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 88886555667888888888888888886666667888888888888888887333 4568888888888888876554
No 265
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=4.5e-19 Score=173.45 Aligned_cols=151 Identities=17% Similarity=0.167 Sum_probs=115.8
Q ss_pred EEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC--CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCc
Q 005880 69 HLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP--SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNN 146 (672)
Q Consensus 69 ~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 146 (672)
.+++++|.++..+..+. ..+++|+|++|+|++.+| .|.++++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 15 ~l~~s~n~l~~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 92 (220)
T 2v70_A 15 TVDCSNQKLNKIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNR 92 (220)
T ss_dssp EEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeEeCCCCcccCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCc
Confidence 56777777777665553 346788888888888755 47788888888888888887666788888888888888888
Q ss_pred cccccchhhcCCCccCeeeccCCcccCc--CCCCCCCCCCeeeccCCcCCCCCCCcCCCCCC---ccccccccccCCCCc
Q 005880 147 FSGQIPLTVNHLTHLLTLKLEANRFSGP--ITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPD---SAFTQNAALCGSPMQ 221 (672)
Q Consensus 147 l~g~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~---~~~~~n~~lc~~~~~ 221 (672)
|++..|..|.++++|++|+|++|+|++. ..+..+++|+.|+|++|+|++..|..|..++. +.+.+|++.|++++.
T Consensus 93 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~ 172 (220)
T 2v70_A 93 LENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLA 172 (220)
T ss_dssp CCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGGH
T ss_pred cCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCchH
Confidence 8877777788888888888888888873 33567888888888888888777777665554 455678888887654
No 266
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=4.7e-20 Score=194.84 Aligned_cols=166 Identities=23% Similarity=0.204 Sum_probs=143.0
Q ss_pred CcccceEEcC-----------CcEeEEEecCCCcccCCCC-CC-CCCCccEEEcccCCCCCCCC-CCCcccccceeeccc
Q 005880 55 CSWTGVSCLQ-----------NRVSHLVLENLQLSGSLQP-LT-SLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSH 120 (672)
Q Consensus 55 c~w~gv~c~~-----------~~v~~L~l~~~~l~~~~~~-l~-~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~ 120 (672)
|.|.-|.|.. ..++.|+|++|+|++.++. +. .+++|++|+|++|+|++..+ .|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 6788899964 3578999999999998877 65 99999999999999999887 799999999999999
Q ss_pred cccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccC-cCCC----CCCCCCCeeeccCCcCCC
Q 005880 121 NNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PITG----LDLRNLQDFNVSGNHLSG 195 (672)
Q Consensus 121 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~----~~l~~L~~l~l~~N~l~g 195 (672)
|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++ +... ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99997777789999999999999999998889999999999999999999998 3322 468999999999999994
Q ss_pred CCCCcCCCCC-----CccccccccccCCCC
Q 005880 196 QIPKSLSGFP-----DSAFTQNAALCGSPM 220 (672)
Q Consensus 196 ~~p~~l~~~~-----~~~~~~n~~lc~~~~ 220 (672)
..+..+..++ .+.+.+|++.|+|.+
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred cCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 3335565554 467789999999865
No 267
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=1.9e-19 Score=176.16 Aligned_cols=144 Identities=19% Similarity=0.197 Sum_probs=131.1
Q ss_pred CcccceEEcC-----------CcEeEEEecCCCcccCCCC--CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccc
Q 005880 55 CSWTGVSCLQ-----------NRVSHLVLENLQLSGSLQP--LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSH 120 (672)
Q Consensus 55 c~w~gv~c~~-----------~~v~~L~l~~~~l~~~~~~--l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~ 120 (672)
|.|..+.|.. ..++.|+|++|+|++.++. |..+++|++|+|++|+|++.++ .|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 7899999964 2577999999999998654 8899999999999999999888 899999999999999
Q ss_pred cccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcC--CCCCCCCCCeeeccCCcCCCCCC
Q 005880 121 NNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPI--TGLDLRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 121 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~l~~L~~l~l~~N~l~g~~p 198 (672)
|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++.. .+..+++|+.|+|++|.+++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999888888999999999999999999888999999999999999999999943 46689999999999999997665
No 268
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.79 E-value=7.7e-19 Score=177.83 Aligned_cols=155 Identities=24% Similarity=0.232 Sum_probs=136.5
Q ss_pred CCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 64 QNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
..+++.|+|++|.+++. +.+..+++|++|+|++|.+++.++ .++++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 62 l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp CTTCCEEECTTSCCCCC-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCcEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 36899999999999974 579999999999999999999888 5899999999999999999777778999999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCCCcCCCCCC---ccccccccccC
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIPKSLSGFPD---SAFTQNAALCG 217 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~---~~~~~n~~lc~ 217 (672)
++|+|++..|..+.++++|+.|+|++|++++..+ +..+++|+.|++++|++++..|..+..++. +.+.+|++.|.
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc
Confidence 9999997777778999999999999999998444 568999999999999999877766665554 55668998888
Q ss_pred CC
Q 005880 218 SP 219 (672)
Q Consensus 218 ~~ 219 (672)
+|
T Consensus 221 ~~ 222 (272)
T 3rfs_A 221 CP 222 (272)
T ss_dssp TT
T ss_pred Cc
Confidence 76
No 269
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=4.8e-19 Score=173.30 Aligned_cols=150 Identities=22% Similarity=0.208 Sum_probs=113.5
Q ss_pred EEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccc
Q 005880 70 LVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFS 148 (672)
Q Consensus 70 L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 148 (672)
+++++++++.++..+. ++|+.|+|++|+|++.++ .|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+
T Consensus 16 v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 93 (220)
T 2v9t_B 16 VDCRGKGLTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93 (220)
T ss_dssp EECTTSCCSSCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC
T ss_pred EEcCCCCcCcCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC
Confidence 4445566666655554 678888888888888777 7888888888888888888777888888888888888888888
Q ss_pred cccchhhcCCCccCeeeccCCcccCcC--CCCCCCCCCeeeccCCcCCCCCCCcCCCCC---CccccccccccCCCCc
Q 005880 149 GQIPLTVNHLTHLLTLKLEANRFSGPI--TGLDLRNLQDFNVSGNHLSGQIPKSLSGFP---DSAFTQNAALCGSPMQ 221 (672)
Q Consensus 149 g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~---~~~~~~n~~lc~~~~~ 221 (672)
+..+..|.++++|++|+|++|+|++.. .+..+++|+.|+|++|+|++..+..|..++ .+.+.+|++.|+|.+.
T Consensus 94 ~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l~ 171 (220)
T 2v9t_B 94 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLK 171 (220)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGGH
T ss_pred ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCccH
Confidence 544455788888888888888888733 356788888888888888866655565544 4456678888887654
No 270
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=5.7e-19 Score=172.77 Aligned_cols=142 Identities=22% Similarity=0.246 Sum_probs=128.0
Q ss_pred CcccceEEcC-----------CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeecccc
Q 005880 55 CSWTGVSCLQ-----------NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHN 121 (672)
Q Consensus 55 c~w~gv~c~~-----------~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N 121 (672)
|.|..|.|.. ..++.|+|++|+|++.++. |..+++|++|+|++|+|++..| .|.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 7899999964 3689999999999998875 9999999999999999999877 8999999999999999
Q ss_pred ccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCC
Q 005880 122 NFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQ 196 (672)
Q Consensus 122 ~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~ 196 (672)
+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+ +..+++|+.|+|++|.+...
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 9995555567899999999999999998889999999999999999999998443 56799999999999999753
No 271
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.78 E-value=1.4e-18 Score=177.53 Aligned_cols=155 Identities=24% Similarity=0.211 Sum_probs=126.5
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.+++.|+|++|.|++... ...+++|++|+|++|+|+..+..+.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 55 ~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~ 133 (290)
T 1p9a_G 55 TRLTQLNLDRAELTKLQV-DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG 133 (290)
T ss_dssp TTCCEEECTTSCCCEEEC-CSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTT
T ss_pred CCCCEEECCCCccCcccC-CCCCCcCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCC
Confidence 567777777777776544 3778888888888888886655788999999999999999977678899999999999999
Q ss_pred CccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCCCcCCCCC---CccccccccccCCC
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIPKSLSGFP---DSAFTQNAALCGSP 219 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p~~l~~~~---~~~~~~n~~lc~~~ 219 (672)
|+|++..+..|..+++|+.|+|++|+|++..+ +..+++|+.|+|++|+|+ .+|..+..++ .+.+.+|++.|+|.
T Consensus 134 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCc
Confidence 99997666678899999999999999987333 356899999999999999 8887766544 45567899999886
Q ss_pred Cc
Q 005880 220 MQ 221 (672)
Q Consensus 220 ~~ 221 (672)
+.
T Consensus 213 ~~ 214 (290)
T 1p9a_G 213 IL 214 (290)
T ss_dssp GH
T ss_pred cH
Confidence 43
No 272
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=2.2e-18 Score=169.73 Aligned_cols=158 Identities=21% Similarity=0.231 Sum_probs=134.0
Q ss_pred ccceEEcCCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccC
Q 005880 57 WTGVSCLQNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLF 135 (672)
Q Consensus 57 w~gv~c~~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~ 135 (672)
|..-.|.. +.+++++++++..+..+. ++|++|+|++|+|++..| .|.++++|++|+|++|+|++..+..|.+++
T Consensus 14 ~~~~~Cs~---~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 88 (229)
T 3e6j_A 14 PSQCSCSG---TTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLT 88 (229)
T ss_dssp CTTCEEET---TEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCCCEEeC---CEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCC
Confidence 45566764 468999999998887664 899999999999999887 799999999999999999855556789999
Q ss_pred CCCeEecccCccccccchhhcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCcCCCCC---Cccccc
Q 005880 136 RLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKSLSGFP---DSAFTQ 211 (672)
Q Consensus 136 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~---~~~~~~ 211 (672)
+|+.|+|++|+|++..+..|..+++|++|+|++|+|+. +.....+++|+.|+|++|+|++..+..|..++ .+.+.+
T Consensus 89 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 168 (229)
T 3e6j_A 89 QLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFG 168 (229)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeC
Confidence 99999999999997767778999999999999999997 44567899999999999999965555565554 455668
Q ss_pred cccccCCC
Q 005880 212 NAALCGSP 219 (672)
Q Consensus 212 n~~lc~~~ 219 (672)
|++.|+++
T Consensus 169 N~~~c~c~ 176 (229)
T 3e6j_A 169 NPWDCECR 176 (229)
T ss_dssp SCBCTTBG
T ss_pred CCccCCcc
Confidence 99999875
No 273
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=3.2e-19 Score=170.65 Aligned_cols=151 Identities=20% Similarity=0.206 Sum_probs=123.2
Q ss_pred eEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCC--CCcccccceeeccccccCCCCChhhhccCCCCeEecccC
Q 005880 68 SHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPS--LSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFN 145 (672)
Q Consensus 68 ~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~--~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 145 (672)
+.|++++|+|+..+..+.. +|++|+|++|+|++.++. ++++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4567788888777665544 899999999999998873 899999999999999999888999999999999999999
Q ss_pred ccccccchhhcCCCccCeeeccCCcccCcC--CCCCCCCCCeeeccCCcCCCCCCC-cCCC-CCCccccccccccCCCC
Q 005880 146 NFSGQIPLTVNHLTHLLTLKLEANRFSGPI--TGLDLRNLQDFNVSGNHLSGQIPK-SLSG-FPDSAFTQNAALCGSPM 220 (672)
Q Consensus 146 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~l~~L~~l~l~~N~l~g~~p~-~l~~-~~~~~~~~n~~lc~~~~ 220 (672)
+|++..|..|.++++|++|+|++|+|++.. .+..+++|++|+|++|.|++..+- ++.. +....+.++...|+.|.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 999888888999999999999999999843 356899999999999999987762 1111 11223345556676653
No 274
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=1.3e-18 Score=166.49 Aligned_cols=163 Identities=23% Similarity=0.290 Sum_probs=124.1
Q ss_pred CcccceEEcC-----------CcEeEEEecCCCcccCCCC--CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccc
Q 005880 55 CSWTGVSCLQ-----------NRVSHLVLENLQLSGSLQP--LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSH 120 (672)
Q Consensus 55 c~w~gv~c~~-----------~~v~~L~l~~~~l~~~~~~--l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~ 120 (672)
|.|+.+.|.. .+++.|+|++|.+++.++. +..+++|++|+|++|+|++.+| .|.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 6788888864 2678899999999888765 7889999999999999998877 788999999999999
Q ss_pred cccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcCCCCCCC-CCCeeeccCCcCCCCCCC
Q 005880 121 NNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLR-NLQDFNVSGNHLSGQIPK 199 (672)
Q Consensus 121 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~-~L~~l~l~~N~l~g~~p~ 199 (672)
|+|++..|..|.++++|++|+|++|+|++.+|..|..+++|++|+|++|.+++..+...+. .|+...+..+......|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 9999888888889999999999999999888888999999999999999988754322111 122234445556666677
Q ss_pred cCCCCCCccccccccccC
Q 005880 200 SLSGFPDSAFTQNAALCG 217 (672)
Q Consensus 200 ~l~~~~~~~~~~n~~lc~ 217 (672)
.+...+-..+..+...|.
T Consensus 168 ~l~~~~l~~l~~~~~~C~ 185 (192)
T 1w8a_A 168 KVRDVQIKDLPHSEFKCS 185 (192)
T ss_dssp TTTTSBGGGSCTTTCCCC
T ss_pred HHcCCChhhCcHhhcCcC
Confidence 666655444444444444
No 275
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.75 E-value=4.4e-18 Score=173.47 Aligned_cols=156 Identities=23% Similarity=0.212 Sum_probs=98.5
Q ss_pred CcEeEEEecCCC-cccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEe
Q 005880 65 NRVSHLVLENLQ-LSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLD 141 (672)
Q Consensus 65 ~~v~~L~l~~~~-l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 141 (672)
.+++.|+|++|. +....+. +..+++|++|+|++|++++.+| .+.++++|++|+|++|++++..+..|+++++|++|+
T Consensus 80 ~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 159 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLF 159 (285)
T ss_dssp TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEE
Confidence 456666666665 5554332 6666666666666666666655 566667777777777777654445566677777777
Q ss_pred cccCccccccchhhcCCCccCeeeccCCcccCc--CCCCCCCCCCeeeccCCcCCCCCCCcCCCC---CCcccccccccc
Q 005880 142 LSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGP--ITGLDLRNLQDFNVSGNHLSGQIPKSLSGF---PDSAFTQNAALC 216 (672)
Q Consensus 142 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~---~~~~~~~n~~lc 216 (672)
|++|+|++..+..+.++++|+.|+|++|++++. ..+..+++|+.|++++|++++..|..+..+ ..+.+.+|++.|
T Consensus 160 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 160 LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred CCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 777777644444566677777777777777663 234566777777777777775444434433 344556777777
Q ss_pred CCCC
Q 005880 217 GSPM 220 (672)
Q Consensus 217 ~~~~ 220 (672)
++++
T Consensus 240 ~~~~ 243 (285)
T 1ozn_A 240 DCRA 243 (285)
T ss_dssp SGGG
T ss_pred CCCc
Confidence 7664
No 276
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=1.7e-18 Score=173.67 Aligned_cols=134 Identities=16% Similarity=0.147 Sum_probs=103.2
Q ss_pred hcccCcCCeEEEEEEEE-cCCcE--EEEEEcccCCcc------------------------hHHHHHHHHHHHcCCCCCc
Q 005880 365 AEMLGKGGFGTAYKAVL-DDGSV--VAVKRLKDASIG------------------------GKREFEQHMEVLGRLRHPN 417 (672)
Q Consensus 365 ~~~lg~G~~g~Vy~~~~-~~g~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~h~n 417 (672)
.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++++.+++|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 36799999999999997 68989 999987543111 1236889999999998876
Q ss_pred e--eeeEEEEEcCCeEEEEEeecCC-C----ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecC
Q 005880 418 L--VGLKAYYFAREEKLLVSEYMPN-G----SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGN 490 (672)
Q Consensus 418 i--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~D 490 (672)
+ ..++++ +..++||||+.+ | +|.++... .++..+..++.|+++||.|||. +.+|+|||
T Consensus 132 i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~---~~givHrD 196 (258)
T 1zth_A 132 VSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQ---EAELVHAD 196 (258)
T ss_dssp CCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHH---TSCEECSS
T ss_pred CCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHH---HCCEEeCC
Confidence 4 334432 356899999942 4 66665432 2244577899999999999993 36899999
Q ss_pred CCCCCEEeCCCCcEEEeccCCCccC
Q 005880 491 IKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 491 lkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
|||+|||+++ .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 277
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.75 E-value=5.8e-18 Score=184.49 Aligned_cols=156 Identities=20% Similarity=0.129 Sum_probs=93.8
Q ss_pred cEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 66 RVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
+++.|+|++|++++..+. |.++++|++|+|++|+|++..| .|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 577788888887776544 6666666666666666666554 55556666666666665553333334444444444444
Q ss_pred cCccc-----------------------------------------------------------------------cccc
Q 005880 144 FNNFS-----------------------------------------------------------------------GQIP 152 (672)
Q Consensus 144 ~N~l~-----------------------------------------------------------------------g~~p 152 (672)
+|+|+ +..|
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 235 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRP 235 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECTTSCCSEECG
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccccccccccccEEECcCCcCcccCc
Confidence 44444 3333
Q ss_pred hhhcCCCccCeeeccCCcccCc--CCCCCCCCCCeeeccCCcCCCCCCCcCCCC---CCccccccccccCCCCc
Q 005880 153 LTVNHLTHLLTLKLEANRFSGP--ITGLDLRNLQDFNVSGNHLSGQIPKSLSGF---PDSAFTQNAALCGSPMQ 221 (672)
Q Consensus 153 ~~~~~l~~L~~L~l~~N~l~~~--~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~---~~~~~~~n~~lc~~~~~ 221 (672)
..|.++++|+.|+|++|++++. ..+..+++|+.|+|++|+|++..+..+..+ ..+.+.+|++.|+|.+.
T Consensus 236 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 236 GSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDIL 309 (452)
T ss_dssp GGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTH
T ss_pred ccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCch
Confidence 4444444555555555555441 223467788888888888885555555444 45566789999998754
No 278
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.74 E-value=3.6e-18 Score=176.05 Aligned_cols=158 Identities=26% Similarity=0.291 Sum_probs=133.1
Q ss_pred CCcEeEEEecCCCcccCCC--CCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCC-CCChhhhccCCCCe
Q 005880 64 QNRVSHLVLENLQLSGSLQ--PLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNG-EFPDSVSSLFRLYR 139 (672)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~~--~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~ 139 (672)
..+++.|+|++|.+++..+ .+..+++|++|+|++|.+++.++ .+.++++|++|+|++|.+++ .+|..+.++++|++
T Consensus 100 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 179 (306)
T 2z66_A 100 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 179 (306)
T ss_dssp CTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred CCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCE
Confidence 3577788888888887765 48888999999999999988777 68889999999999999986 58888999999999
Q ss_pred EecccCccccccchhhcCCCccCeeeccCCcccCcC--CCCCCCCCCeeeccCCcCCCCCCCcCCCCC----Cccccccc
Q 005880 140 LDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPI--TGLDLRNLQDFNVSGNHLSGQIPKSLSGFP----DSAFTQNA 213 (672)
Q Consensus 140 L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~----~~~~~~n~ 213 (672)
|+|++|+|++..|..+.++++|+.|+|++|++++.. .+..+++|+.|+|++|++++..|..+..++ .+.+.+|+
T Consensus 180 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~ 259 (306)
T 2z66_A 180 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQND 259 (306)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCC
T ss_pred EECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCC
Confidence 999999999888889999999999999999998833 456789999999999999998888776654 45566899
Q ss_pred cccCCCCc
Q 005880 214 ALCGSPMQ 221 (672)
Q Consensus 214 ~lc~~~~~ 221 (672)
..|++++.
T Consensus 260 ~~~~c~~~ 267 (306)
T 2z66_A 260 FACTCEHQ 267 (306)
T ss_dssp EECSGGGH
T ss_pred eecccChH
Confidence 88887643
No 279
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.74 E-value=3.2e-18 Score=178.18 Aligned_cols=145 Identities=19% Similarity=0.301 Sum_probs=122.5
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhc---------cC
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSS---------LF 135 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~---------l~ 135 (672)
.+++.|+|++|.++..+..++.+++|++|+|++|.++..++.++++++|++|+|++|++.+.+|..++. ++
T Consensus 104 ~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~ 183 (328)
T 4fcg_A 104 SHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLV 183 (328)
T ss_dssp TTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEEST
T ss_pred CCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCC
Confidence 578899999999986655688999999999999999954448889999999999999888899988765 88
Q ss_pred CCCeEecccCccccccchhhcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcccc
Q 005880 136 RLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFT 210 (672)
Q Consensus 136 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~ 210 (672)
+|++|+|++|+|+ .+|..++++++|++|+|++|++++ +..+..+++|++|+|++|++.+.+|..+..++.+...
T Consensus 184 ~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L 258 (328)
T 4fcg_A 184 NLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRL 258 (328)
T ss_dssp TCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEE
T ss_pred CCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEE
Confidence 9999999999998 888889999999999999999988 3345678899999999999998999888777766544
No 280
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.73 E-value=2.6e-18 Score=195.31 Aligned_cols=142 Identities=20% Similarity=0.188 Sum_probs=125.8
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
..++.|+|++|+|++.++. |.++++|++|+|++|+|++++| .|.+|++|++|+|++|+|++..|..|.+|++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 4689999999999998865 9999999999999999999888 7999999999999999999766678999999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccC-cCC--CCCCCCCCeeeccCCcCCCCCCCcCCCCCC
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PIT--GLDLRNLQDFNVSGNHLSGQIPKSLSGFPD 206 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~--~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~ 206 (672)
++|+|++..+..|+++++|++|+|++|++++ ..+ ...+++|++|++++|+|++..|..+..+..
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~ 198 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQ 198 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHT
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhh
Confidence 9999997666789999999999999999987 333 467999999999999999877777654443
No 281
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.73 E-value=1.5e-17 Score=168.61 Aligned_cols=155 Identities=20% Similarity=0.249 Sum_probs=99.5
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCC-CCChhhhccCCCCeEe
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNG-EFPDSVSSLFRLYRLD 141 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~ 141 (672)
.+++.|+|++|.+++..+. +..+++|++|+|++|.+++..+ .++++++|++|+|++|++++ .+|..++++++|+.|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~ 155 (276)
T 2z62_A 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD 155 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE
T ss_pred cCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEE
Confidence 3556666666666655533 5666666666666666666555 56666666666666666664 2466666666666666
Q ss_pred cccCccccccchhhcCCCccC----eeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCcCCCCC---Cccccccc
Q 005880 142 LSFNNFSGQIPLTVNHLTHLL----TLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKSLSGFP---DSAFTQNA 213 (672)
Q Consensus 142 l~~N~l~g~~p~~~~~l~~L~----~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~---~~~~~~n~ 213 (672)
|++|+|++..+..+..+++|+ .|++++|++++ +.......+|+.|+|++|+|++..+..+..++ .+.+.+|+
T Consensus 156 Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 235 (276)
T 2z62_A 156 LSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 235 (276)
T ss_dssp CCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSC
T ss_pred CCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCc
Confidence 666666655555555555555 66666666665 23334455899999999999955554455444 55677899
Q ss_pred cccCCC
Q 005880 214 ALCGSP 219 (672)
Q Consensus 214 ~lc~~~ 219 (672)
+.|+|+
T Consensus 236 ~~c~c~ 241 (276)
T 2z62_A 236 WDCSCP 241 (276)
T ss_dssp BCCCTT
T ss_pred ccccCC
Confidence 999986
No 282
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.72 E-value=5.9e-18 Score=178.20 Aligned_cols=161 Identities=25% Similarity=0.267 Sum_probs=135.0
Q ss_pred CCCCCCCCcccceEEcC-------------CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccc
Q 005880 48 WNSTSDPCSWTGVSCLQ-------------NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTA 112 (672)
Q Consensus 48 W~~~~~~c~w~gv~c~~-------------~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~ 112 (672)
|.....+|.|.|+ |.. .+++.|+|++|++++.++. +.++++|++|+|++|++++..| .|.++++
T Consensus 23 ~~~~~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 101 (353)
T 2z80_A 23 SNQASLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGS 101 (353)
T ss_dssp ----CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred CCccCCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCC
Confidence 4444578999998 642 3789999999999998774 9999999999999999999877 7999999
Q ss_pred cceeeccccccCCCCChhhhccCCCCeEecccCccccccch--hhcCCCccCeeeccCCc-ccCc--CCCCCCCCCCeee
Q 005880 113 LKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPL--TVNHLTHLLTLKLEANR-FSGP--ITGLDLRNLQDFN 187 (672)
Q Consensus 113 L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~--~~~~l~~L~~L~l~~N~-l~~~--~~~~~l~~L~~l~ 187 (672)
|++|+|++|++++..+..|+++++|++|+|++|+++ .+|. .+.++++|++|++++|+ +++. ..+..+++|++|+
T Consensus 102 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~ 180 (353)
T 2z80_A 102 LEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELE 180 (353)
T ss_dssp CCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred CCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEE
Confidence 999999999999544455899999999999999999 5655 78999999999999995 6552 3466899999999
Q ss_pred ccCCcCCCCCCCcCCCCCCcccc
Q 005880 188 VSGNHLSGQIPKSLSGFPDSAFT 210 (672)
Q Consensus 188 l~~N~l~g~~p~~l~~~~~~~~~ 210 (672)
+++|++++..|..+..++.+...
T Consensus 181 l~~n~l~~~~~~~l~~l~~L~~L 203 (353)
T 2z80_A 181 IDASDLQSYEPKSLKSIQNVSHL 203 (353)
T ss_dssp EEETTCCEECTTTTTTCSEEEEE
T ss_pred CCCCCcCccCHHHHhccccCCee
Confidence 99999998889998888776554
No 283
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.72 E-value=7.2e-17 Score=156.31 Aligned_cols=150 Identities=20% Similarity=0.183 Sum_probs=127.3
Q ss_pred eEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCc
Q 005880 68 SHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNN 146 (672)
Q Consensus 68 ~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 146 (672)
+.+++++++++..+..+ .++|++|+|++|++++.++ .+.++++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 10 ~~v~c~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp TEEECCSSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEecCCCccCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 57889999998877655 4699999999999998877 58899999999999999996666678999999999999999
Q ss_pred cccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCCCcCCCCC---CccccccccccCCC
Q 005880 147 FSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIPKSLSGFP---DSAFTQNAALCGSP 219 (672)
Q Consensus 147 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p~~l~~~~---~~~~~~n~~lc~~~ 219 (672)
|++..+..|.++++|++|+|++|+|++..+ +..+++|+.|++++|++++..+..+..++ .+.+.+|++.|.++
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 997666678999999999999999998443 56899999999999999965555555544 45566898888775
No 284
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.72 E-value=4.5e-18 Score=199.77 Aligned_cols=137 Identities=26% Similarity=0.300 Sum_probs=122.2
Q ss_pred CCCCCccEEEcccCCCCCCCC--CCCcccccceeeccccccC-----CCCChhhhccCCCCeEecccCccccccchhhcC
Q 005880 85 TSLTQLRVLSLKYNRFTGPVP--SLSNLTALKLLFLSHNNFN-----GEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNH 157 (672)
Q Consensus 85 ~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~l~~N~l~-----g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~ 157 (672)
..+++|++|+|++|++++..+ .+..+++|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++..|..|.+
T Consensus 423 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 502 (844)
T 3j0a_A 423 LRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSH 502 (844)
T ss_dssp TTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSS
T ss_pred hcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccc
Confidence 478899999999999998766 4677899999999999997 455677899999999999999999888889999
Q ss_pred CCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCccccccccccCCCCc
Q 005880 158 LTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFTQNAALCGSPMQ 221 (672)
Q Consensus 158 l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~~n~~lc~~~~~ 221 (672)
+++|+.|+|++|+|++..+..-.++|+.|+|++|+|+|.+|..+.++..+.+.+|++.|+|++.
T Consensus 503 l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 503 LTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECELS 566 (844)
T ss_dssp CCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSCC
T ss_pred hhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccccccH
Confidence 9999999999999998554433489999999999999999999999999999999999999865
No 285
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.72 E-value=6.7e-18 Score=188.73 Aligned_cols=156 Identities=23% Similarity=0.232 Sum_probs=138.0
Q ss_pred CCcccceEEcC-------------CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeec
Q 005880 54 PCSWTGVSCLQ-------------NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFL 118 (672)
Q Consensus 54 ~c~w~gv~c~~-------------~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l 118 (672)
.|.|.|+ |+. .+++.|+|++|.+++..+. |.++++|++|+|++|++++.+| .|+++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5899998 853 3799999999999998765 9999999999999999999887 7999999999999
Q ss_pred cccccCCCCChhhhccCCCCeEecccCcccc-ccchhhcCCCccCeeeccCCcccCcC---CCCCCCCCCeeeccCCcCC
Q 005880 119 SHNNFNGEFPDSVSSLFRLYRLDLSFNNFSG-QIPLTVNHLTHLLTLKLEANRFSGPI---TGLDLRNLQDFNVSGNHLS 194 (672)
Q Consensus 119 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~---~~~~l~~L~~l~l~~N~l~ 194 (672)
++|++++..|..|+++++|++|+|++|++++ .+|..++++++|++|++++|++.+.+ .+..+++|++|++++|+++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 9999998777789999999999999999996 46788999999999999999965532 4678999999999999999
Q ss_pred CCCCCcCCCCCCcccc
Q 005880 195 GQIPKSLSGFPDSAFT 210 (672)
Q Consensus 195 g~~p~~l~~~~~~~~~ 210 (672)
+.+|..+..++.+...
T Consensus 162 ~~~~~~l~~l~~L~~L 177 (549)
T 2z81_A 162 NYQSQSLKSIRDIHHL 177 (549)
T ss_dssp EECTTTTTTCSEEEEE
T ss_pred ccChhhhhccccCceE
Confidence 9999998887766543
No 286
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.72 E-value=4.1e-17 Score=162.99 Aligned_cols=133 Identities=25% Similarity=0.274 Sum_probs=120.8
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
.+++.|+|++|.+++.++. +..+++|++|+|++|+|++.++ .|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 6899999999999998776 8999999999999999999887 6899999999999999999766667899999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccCcC--CCCCCCCCCeeeccCCcCCCCC
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPI--TGLDLRNLQDFNVSGNHLSGQI 197 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~l~~L~~l~l~~N~l~g~~ 197 (672)
++|+|++..+..|.++++|++|+|++|+|++.. .+..+++|+.|+|++|++++..
T Consensus 139 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred cCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 999999766668999999999999999999844 3568999999999999999763
No 287
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.72 E-value=3e-17 Score=167.33 Aligned_cols=145 Identities=22% Similarity=0.208 Sum_probs=120.3
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccc-cCCCCChhhhccCCCCeEe
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNN-FNGEFPDSVSSLFRLYRLD 141 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~-l~g~~p~~~~~l~~L~~L~ 141 (672)
.+++.|+|++|.+++.++. |..+++|++|+|++|.+++..| .+.++++|++|+|++|. +++..|..|.++++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 4788999999999887765 8889999999999999998766 78899999999999997 7766688889999999999
Q ss_pred cccCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCCCcCCCCCCccc
Q 005880 142 LSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAF 209 (672)
Q Consensus 142 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~ 209 (672)
|++|++++..|..+.++++|++|+|++|++++..+ +..+++|+.|++++|++++..+..+..++.+..
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 181 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDR 181 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCE
Confidence 99999997778888899999999999999987333 567889999999999998555555666655543
No 288
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.71 E-value=5.5e-17 Score=164.18 Aligned_cols=134 Identities=26% Similarity=0.271 Sum_probs=122.7
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
.+++.|+|++|.+++.++. +..+++|++|+|++|++++.++ .++++++|++|+|++|++++..|..++++++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 6899999999999988876 7999999999999999999888 5899999999999999999777777899999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCC
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p 198 (672)
++|+|++..|..++++++|+.|+|++|++++..+ +..+++|+.|++++|.+.|..|
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 9999998777788999999999999999999444 5689999999999999998766
No 289
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.71 E-value=8.3e-17 Score=162.64 Aligned_cols=157 Identities=18% Similarity=0.190 Sum_probs=132.5
Q ss_pred CCCCcccceEEcC-CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCCh
Q 005880 52 SDPCSWTGVSCLQ-NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPD 129 (672)
Q Consensus 52 ~~~c~w~gv~c~~-~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~ 129 (672)
.++|.|.|+.|.- ..++.+++++++|+..+..+. ++|+.|+|++|++++.++ .|.++++|++|+|++|++++..+.
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~ 79 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLTAIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG 79 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTT
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCCccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChh
Confidence 4789999999964 567899999999998776664 689999999999998887 799999999999999999955555
Q ss_pred hhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCCCcCCCCCCc
Q 005880 130 SVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIPKSLSGFPDS 207 (672)
Q Consensus 130 ~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~ 207 (672)
.|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+ +..+++|++|+|++|.|++..+..|..++.+
T Consensus 80 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 159 (270)
T 2o6q_A 80 IFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSL 159 (270)
T ss_dssp TTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred hhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCccc
Confidence 56889999999999999997666778999999999999999998443 5689999999999999996555556666655
Q ss_pred ccc
Q 005880 208 AFT 210 (672)
Q Consensus 208 ~~~ 210 (672)
...
T Consensus 160 ~~L 162 (270)
T 2o6q_A 160 KEL 162 (270)
T ss_dssp CEE
T ss_pred cee
Confidence 443
No 290
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.71 E-value=2.1e-17 Score=180.25 Aligned_cols=153 Identities=21% Similarity=0.257 Sum_probs=134.5
Q ss_pred CCCcccc--eEEcC----------CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC--CCCcccccceee
Q 005880 53 DPCSWTG--VSCLQ----------NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP--SLSNLTALKLLF 117 (672)
Q Consensus 53 ~~c~w~g--v~c~~----------~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~ 117 (672)
..|.|.+ |.|.. .+++.|+|++|.+++..+. |.++++|++|+|++|.+.+.++ .|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4566666 77864 4689999999999998655 9999999999999999987664 699999999999
Q ss_pred ccccccCCCCChhhhccCCCCeEecccCccccccchh--hcCCCccCeeeccCCcccCcCC---CCCCCCCCeeeccCCc
Q 005880 118 LSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLT--VNHLTHLLTLKLEANRFSGPIT---GLDLRNLQDFNVSGNH 192 (672)
Q Consensus 118 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~l~~L~~L~l~~N~l~~~~~---~~~l~~L~~l~l~~N~ 192 (672)
|++|++++..|..|+++++|++|+|++|++++.+|.. +.++++|++|+|++|++++..+ +..+++|++|++++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999877766 9999999999999999998544 5689999999999999
Q ss_pred CCCCCCCcCCCCC
Q 005880 193 LSGQIPKSLSGFP 205 (672)
Q Consensus 193 l~g~~p~~l~~~~ 205 (672)
+++..|..+..+.
T Consensus 166 l~~~~~~~l~~l~ 178 (455)
T 3v47_A 166 VKSICEEDLLNFQ 178 (455)
T ss_dssp BSCCCTTTSGGGT
T ss_pred ccccChhhhhccc
Confidence 9998888877653
No 291
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.70 E-value=5.1e-17 Score=176.37 Aligned_cols=155 Identities=23% Similarity=0.268 Sum_probs=121.2
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-C-------------------------CCcccccceee
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-S-------------------------LSNLTALKLLF 117 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~-------------------------~~~l~~L~~L~ 117 (672)
.+++.|+|++|+|++.++. |..+++|++|+|++|+|++.++ . |.++++|++|+
T Consensus 112 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~ 191 (440)
T 3zyj_A 112 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLN 191 (440)
T ss_dssp SSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEE
T ss_pred ccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeec
Confidence 5788889998888877765 7888888888888888775544 2 45566677777
Q ss_pred ccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCc--CCCCCCCCCCeeeccCCcCCC
Q 005880 118 LSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGP--ITGLDLRNLQDFNVSGNHLSG 195 (672)
Q Consensus 118 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~l~~L~~l~l~~N~l~g 195 (672)
|++|+++ .+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++. ..+..+++|+.|+|++|+|++
T Consensus 192 L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 192 LAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp CTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred CCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc
Confidence 7777777 555 377788888888888888887788899999999999999999883 345689999999999999996
Q ss_pred CCCCcCCC---CCCccccccccccCCCCc
Q 005880 196 QIPKSLSG---FPDSAFTQNAALCGSPMQ 221 (672)
Q Consensus 196 ~~p~~l~~---~~~~~~~~n~~lc~~~~~ 221 (672)
..+..+.. +..+.+.+|++.|+|.+.
T Consensus 270 ~~~~~~~~l~~L~~L~L~~Np~~CdC~l~ 298 (440)
T 3zyj_A 270 LPHDLFTPLHHLERIHLHHNPWNCNCDIL 298 (440)
T ss_dssp CCTTTTSSCTTCCEEECCSSCEECSSTTH
T ss_pred cChhHhccccCCCEEEcCCCCccCCCCch
Confidence 55555554 445667799999999764
No 292
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=4.2e-17 Score=152.24 Aligned_cols=134 Identities=25% Similarity=0.211 Sum_probs=119.0
Q ss_pred CcEeEEEecCCCcc-cCCCC-CCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLS-GSLQP-LTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~-~~~~~-l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
.+++.|+|++|+++ +.++. +..+++|++|+|++|.+++. +.+.++++|++|+|++|++++.+|..+.++++|+.|+|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 67999999999998 44444 79999999999999999987 88999999999999999999889999999999999999
Q ss_pred ccCcccccc-chhhcCCCccCeeeccCCcccCcCC-----CCCCCCCCeeeccCCcCCCCCCCc
Q 005880 143 SFNNFSGQI-PLTVNHLTHLLTLKLEANRFSGPIT-----GLDLRNLQDFNVSGNHLSGQIPKS 200 (672)
Q Consensus 143 ~~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~~~~~-----~~~l~~L~~l~l~~N~l~g~~p~~ 200 (672)
++|+|++.. +..+..+++|+.|++++|++++..+ +..+++|++|++++|.+. .+|++
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 999999532 2789999999999999999998544 568999999999999998 67754
No 293
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.70 E-value=2.6e-17 Score=185.68 Aligned_cols=169 Identities=16% Similarity=0.121 Sum_probs=137.3
Q ss_pred CCCCCCCCCCCCc----ccceEEcC------------------CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCC
Q 005880 44 KLTTWNSTSDPCS----WTGVSCLQ------------------NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRF 100 (672)
Q Consensus 44 ~~~~W~~~~~~c~----w~gv~c~~------------------~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l 100 (672)
.+.+|.++.+||. |.++.|.. .+++.|++++|.+...++. +..+++|++|+|++|.|
T Consensus 8 ~l~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l 87 (597)
T 3oja_B 8 NVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI 87 (597)
T ss_dssp ---CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCC
T ss_pred cccCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCC
Confidence 4678988778874 76665531 3568899999999888776 78899999999999999
Q ss_pred CCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcC--CC
Q 005880 101 TGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPI--TG 177 (672)
Q Consensus 101 ~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~ 177 (672)
++.+| .|+++++|++|+|++|.|++..|..|+++++|++|+|++|+|++..+..|+++++|++|+|++|+|++.. .+
T Consensus 88 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 167 (597)
T 3oja_B 88 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 167 (597)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT
T ss_pred CCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhh
Confidence 99887 8999999999999999999888888999999999999999999555555799999999999999999844 36
Q ss_pred CCCCCCCeeeccCCcCCCCCCCcCCCCCCcccccc
Q 005880 178 LDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFTQN 212 (672)
Q Consensus 178 ~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~~n 212 (672)
..+++|+.|+|++|.|++.-+..+.++..+.+.+|
T Consensus 168 ~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 168 QATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 202 (597)
T ss_dssp TTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSS
T ss_pred hcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccC
Confidence 78999999999999999754455555555555444
No 294
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.70 E-value=2.3e-17 Score=186.73 Aligned_cols=155 Identities=22% Similarity=0.212 Sum_probs=109.8
Q ss_pred cEeEEEecCCCcccCCC--CCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCC-CCChhhhccCCCCeEe
Q 005880 66 RVSHLVLENLQLSGSLQ--PLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNG-EFPDSVSSLFRLYRLD 141 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~--~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~ 141 (672)
+++.|++++|.+.+.++ .+..+++|++|+|++|.+++.+| .+.++++|++|+|++|++++ .+|..++++++|+.|+
T Consensus 400 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 479 (606)
T 3vq2_A 400 ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLD 479 (606)
T ss_dssp TCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEE
Confidence 45555555555555544 25666677777777777766665 56777777777777777776 3677777777788888
Q ss_pred cccCccccccchhhcCCCccCeeeccCCcccCc--CCCCCCCCCCeeeccCCcCCCCCCCcCCCCC----Cccccccccc
Q 005880 142 LSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGP--ITGLDLRNLQDFNVSGNHLSGQIPKSLSGFP----DSAFTQNAAL 215 (672)
Q Consensus 142 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~----~~~~~~n~~l 215 (672)
|++|++++..|..+.++++|++|+|++|++++. ..+..+++|+.|+|++|+|+ .+|..+..++ .+.+.+|++.
T Consensus 480 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~ 558 (606)
T 3vq2_A 480 LSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVA 558 (606)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCC
T ss_pred CCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcc
Confidence 888888777777777888888888888888773 34567788888888888888 6776665443 4556688888
Q ss_pred cCCCCc
Q 005880 216 CGSPMQ 221 (672)
Q Consensus 216 c~~~~~ 221 (672)
|+|++.
T Consensus 559 c~c~~~ 564 (606)
T 3vq2_A 559 CICEHQ 564 (606)
T ss_dssp CSSTTH
T ss_pred cCCccH
Confidence 888764
No 295
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.70 E-value=5.1e-17 Score=165.89 Aligned_cols=144 Identities=24% Similarity=0.197 Sum_probs=123.2
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
..++.|+|++|.+++..+. |..+++|++|+|++|.|++..+ .+.+++|++|+|++|+|+ .+|..+.++++|++|+|+
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 5789999999999987655 8999999999999999997654 488999999999999999 899999999999999999
Q ss_pred cCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCCCcCCCCCCcccc
Q 005880 144 FNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFT 210 (672)
Q Consensus 144 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~ 210 (672)
+|+|++..|..|.++++|++|+|++|+|++..+ +..+++|+.|+|++|+|++..+..+..++.+...
T Consensus 109 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 177 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTL 177 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEE
T ss_pred CCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEE
Confidence 999997777889999999999999999998433 4578999999999999994444445556655443
No 296
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=8.1e-17 Score=151.72 Aligned_cols=132 Identities=23% Similarity=0.220 Sum_probs=111.1
Q ss_pred CcccceEEcCCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhc
Q 005880 55 CSWTGVSCLQNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSS 133 (672)
Q Consensus 55 c~w~gv~c~~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~ 133 (672)
|+|++|.|.. ++++..+..+ .++|+.|+|++|++++.++ .+.++++|++|+|++|+|++..+..|.+
T Consensus 7 C~~~~l~~~~----------~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 74 (177)
T 2o6r_A 7 CSGTEIRCNS----------KGLTSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDK 74 (177)
T ss_dssp EETTEEECCS----------SCCSSCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred eCCCEEEecC----------CCCccCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccC
Confidence 6787776654 5555555433 3689999999999998877 5799999999999999999666677899
Q ss_pred cCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCC
Q 005880 134 LFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 134 l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p 198 (672)
+++|+.|+|++|+|++..+..+.++++|++|+|++|+|++..+ +..+++|++|++++|.+++..|
T Consensus 75 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 75 LTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9999999999999997777778999999999999999998433 3578999999999999997665
No 297
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=3.7e-17 Score=156.94 Aligned_cols=140 Identities=18% Similarity=0.258 Sum_probs=120.0
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.+++.|++++|+++..+ .+..+++|++|+|++|.++. ++.+.++++|++|+|++|++++..|..++++++|++|+|++
T Consensus 44 ~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~ 121 (197)
T 4ezg_A 44 NSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATN-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISH 121 (197)
T ss_dssp HTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSC-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCS
T ss_pred CCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCc-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecC
Confidence 46889999999998544 78899999999999997764 45788999999999999999988899999999999999999
Q ss_pred CccccccchhhcCCCccCeeeccCCc-ccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcc
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANR-FSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSA 208 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~ 208 (672)
|++++..|..++++++|++|+|++|+ ++.......+++|+.|++++|++++ ++ .+..++.+.
T Consensus 122 n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~ 184 (197)
T 4ezg_A 122 SAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLN 184 (197)
T ss_dssp SBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCC
T ss_pred CccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCC
Confidence 99998889999999999999999998 6654456789999999999999985 54 455554443
No 298
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.69 E-value=2.4e-17 Score=167.24 Aligned_cols=141 Identities=21% Similarity=0.191 Sum_probs=124.9
Q ss_pred CcEeEEEecCCCcccCCC-CCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQ-PLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~-~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
..++.|+|++|++++..+ .+.++++|++|+|++|++++..+ .+.++++|++|+|++|++++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 368999999999999887 49999999999999999998877 7999999999999999999888889999999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccC-cC--CCCCCCCCCeeeccCCcCCCCCCCcCCCCC
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PI--TGLDLRNLQDFNVSGNHLSGQIPKSLSGFP 205 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~--~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~ 205 (672)
++|++++..+..++++++|++|+|++|++++ .+ .+..+++|++|++++|++++..+..+..++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 173 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH 173 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHH
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhh
Confidence 9999997777689999999999999999987 33 356899999999999999976666655444
No 299
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.69 E-value=5.3e-17 Score=173.30 Aligned_cols=168 Identities=16% Similarity=0.152 Sum_probs=134.2
Q ss_pred CCCCCCCCCCCCc----ccceEEcC------------------CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCC
Q 005880 44 KLTTWNSTSDPCS----WTGVSCLQ------------------NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRF 100 (672)
Q Consensus 44 ~~~~W~~~~~~c~----w~gv~c~~------------------~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l 100 (672)
.+++|..+.+||. |.++.|.. .+++.|++++|.++..++. +..+++|++|+|++|.+
T Consensus 2 ~~~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i 81 (390)
T 3o6n_A 2 NVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI 81 (390)
T ss_dssp -----CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCC
T ss_pred CcCCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcc
Confidence 3678987778874 55544431 4678899999999988776 78899999999999999
Q ss_pred CCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccch-hhcCCCccCeeeccCCcccCcCC--
Q 005880 101 TGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPL-TVNHLTHLLTLKLEANRFSGPIT-- 176 (672)
Q Consensus 101 ~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~~~~~-- 176 (672)
++.++ .|.++++|++|+|++|++++..|..|+++++|++|+|++|+|+ .+|. .|.++++|++|+|++|++++..+
T Consensus 82 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 160 (390)
T 3o6n_A 82 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDT 160 (390)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTT
T ss_pred cccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhh
Confidence 99887 8999999999999999999888888999999999999999999 5555 46899999999999999998433
Q ss_pred CCCCCCCCeeeccCCcCCCCCCCcCCCCCCcccccc
Q 005880 177 GLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFTQN 212 (672)
Q Consensus 177 ~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~~n 212 (672)
+..+++|++|++++|++++.-...+.++..+.+.+|
T Consensus 161 ~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 161 FQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196 (390)
T ss_dssp TSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSS
T ss_pred ccCCCCCCEEECCCCcCCccccccccccceeecccc
Confidence 678999999999999999653345555555555444
No 300
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.69 E-value=5.5e-17 Score=167.13 Aligned_cols=139 Identities=26% Similarity=0.268 Sum_probs=82.7
Q ss_pred CcccceEEcC-----------CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCC--C-CCCcccccceeecc
Q 005880 55 CSWTGVSCLQ-----------NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPV--P-SLSNLTALKLLFLS 119 (672)
Q Consensus 55 c~w~gv~c~~-----------~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~--p-~~~~l~~L~~L~l~ 119 (672)
|.|.+|.|.. .+++.|+|++|+++..++. |.++++|++|+|++|+++... + .+..+++|++|+|+
T Consensus 7 C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred eCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 8999999964 3789999999999987766 789999999999999988431 2 33445555555555
Q ss_pred ccccCCCCChhhhccCCCCeEecccCccccccc-hhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCC
Q 005880 120 HNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIP-LTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLS 194 (672)
Q Consensus 120 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~ 194 (672)
+|.++ .+|..+.++++|++|+|++|++++..+ ..+.++++|++|++++|++++..+ +..+++|++|++++|.++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 163 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccc
Confidence 55555 344444444555555555554443222 234444444444444444443221 233444444444444444
No 301
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.68 E-value=1.6e-17 Score=190.72 Aligned_cols=177 Identities=20% Similarity=0.173 Sum_probs=116.8
Q ss_pred hhhHHHHHHHHhcCCCC--CCCCCCCCC-CCCCcccceEEcCCcEeEEEecCCCcccCC---------------------
Q 005880 26 SPDLNALLDFKASSDEA--NKLTTWNST-SDPCSWTGVSCLQNRVSHLVLENLQLSGSL--------------------- 81 (672)
Q Consensus 26 ~~d~~all~~k~~~~~~--~~~~~W~~~-~~~c~w~gv~c~~~~v~~L~l~~~~l~~~~--------------------- 81 (672)
..++++|+++..+.... ..-..|... +..+.|.++.++..+++.|+|.+|.+....
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~~ 210 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDIE 210 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCccccc
Confidence 45788999998765322 223456433 456789999888777776666554443221
Q ss_pred -------CCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchh
Q 005880 82 -------QPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLT 154 (672)
Q Consensus 82 -------~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 154 (672)
..+..+++|+.|+|++|.++.+++.+.++++|++|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+|..
T Consensus 211 n~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~ 288 (727)
T 4b8c_D 211 NRMVMPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAE 288 (727)
T ss_dssp -----------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSS
T ss_pred cceecChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChh
Confidence 1266788999999999999966568889999999999999999 89999999999999999999999 88999
Q ss_pred hcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCcCCCC
Q 005880 155 VNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKSLSGF 204 (672)
Q Consensus 155 ~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~ 204 (672)
|++|++|++|+|++|+|+. +..+..+++|+.|+|++|.|+|.+|..+..+
T Consensus 289 ~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 289 LGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp GGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred hcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 9999999999999999986 4456789999999999999999888776543
No 302
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.68 E-value=5.7e-17 Score=183.50 Aligned_cols=141 Identities=18% Similarity=0.127 Sum_probs=127.8
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
.+++.|+|++|.+++.++. |.++++|++|+|++|++++..| .|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 5789999999999998874 9999999999999999999888 7999999999999999999888999999999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccC-c--CCCCCCCCCCeeeccCCcCCCCCCCcCCCCC
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-P--ITGLDLRNLQDFNVSGNHLSGQIPKSLSGFP 205 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~--~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~ 205 (672)
++|++++..|..++++++|++|+|++|++++ . ..+..+++|++|++++|++++..|..+..+.
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 177 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLR 177 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHH
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhh
Confidence 9999997777899999999999999999986 3 3467899999999999999987777665544
No 303
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.68 E-value=9.9e-17 Score=165.57 Aligned_cols=132 Identities=21% Similarity=0.131 Sum_probs=57.3
Q ss_pred cEeEEEecCCCcccCCCC-----CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCC--CC--hhhhccC
Q 005880 66 RVSHLVLENLQLSGSLQP-----LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGE--FP--DSVSSLF 135 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~-----l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~--~p--~~~~~l~ 135 (672)
+++.|+|++|.+++..+. +..+++|++|+|++|++++.++ .++++++|++|+|++|++.+. ++ ..+++++
T Consensus 118 ~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~ 197 (310)
T 4glp_A 118 ALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFP 197 (310)
T ss_dssp CCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSC
T ss_pred CCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCC
Confidence 344455555554443221 2344455555555555544444 444455555555555544421 11 1123444
Q ss_pred CCCeEecccCccccccch----hhcCCCccCeeeccCCcccCcCC--CCCC---CCCCeeeccCCcCCCCCCC
Q 005880 136 RLYRLDLSFNNFSGQIPL----TVNHLTHLLTLKLEANRFSGPIT--GLDL---RNLQDFNVSGNHLSGQIPK 199 (672)
Q Consensus 136 ~L~~L~l~~N~l~g~~p~----~~~~l~~L~~L~l~~N~l~~~~~--~~~l---~~L~~l~l~~N~l~g~~p~ 199 (672)
+|++|+|++|+|+ .+|. .++++++|++|+|++|+|++..+ ...+ ++|++|+|++|+|+ .+|.
T Consensus 198 ~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~ 268 (310)
T 4glp_A 198 AIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPK 268 (310)
T ss_dssp CCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCS
T ss_pred CCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhh
Confidence 4555555555444 2222 12344445555555555444211 2222 34455555555544 4443
No 304
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=9.4e-17 Score=146.63 Aligned_cols=125 Identities=25% Similarity=0.206 Sum_probs=107.7
Q ss_pred CcEeEEEecCCCcc-cCCCC-CCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLS-GSLQP-LTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~-~~~~~-l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
.+++.|++++|.++ +.++. +..+++|++|+|++|.+++. +.++++++|++|+|++|++++.+|..+.++++|++|+|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 57889999999998 44444 78999999999999999987 88899999999999999999778988888999999999
Q ss_pred ccCccccc-cchhhcCCCccCeeeccCCcccCcCC-----CCCCCCCCeeeccC
Q 005880 143 SFNNFSGQ-IPLTVNHLTHLLTLKLEANRFSGPIT-----GLDLRNLQDFNVSG 190 (672)
Q Consensus 143 ~~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~~~~~-----~~~l~~L~~l~l~~ 190 (672)
++|+|++. .|..+..+++|++|++++|++++..+ ...+++|+.||+++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999863 44789999999999999999988554 45788999998864
No 305
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.66 E-value=1.4e-16 Score=174.82 Aligned_cols=154 Identities=21% Similarity=0.190 Sum_probs=131.8
Q ss_pred cccceEEcC-----------CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccc
Q 005880 56 SWTGVSCLQ-----------NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNN 122 (672)
Q Consensus 56 ~w~gv~c~~-----------~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~ 122 (672)
.|..|.|.. .+++.|+|++|++++..+. |.++++|++|+|++|.+++..| .|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 467888853 3688999999999998765 9999999999999999999877 89999999999999999
Q ss_pred cCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccC--cCCCCCCCCCCeeeccCCcCCCCCCCc
Q 005880 123 FNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG--PITGLDLRNLQDFNVSGNHLSGQIPKS 200 (672)
Q Consensus 123 l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~l~~L~~l~l~~N~l~g~~p~~ 200 (672)
+++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|++++ +..+..+++|+.|+|++|++++..+..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 995555668999999999999999998889999999999999999999988 334678999999999999999554455
Q ss_pred CCCCCCccc
Q 005880 201 LSGFPDSAF 209 (672)
Q Consensus 201 l~~~~~~~~ 209 (672)
+..++.+..
T Consensus 172 l~~l~~L~~ 180 (477)
T 2id5_A 172 LSHLHGLIV 180 (477)
T ss_dssp HTTCTTCCE
T ss_pred hcccCCCcE
Confidence 655555443
No 306
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.66 E-value=1e-16 Score=177.72 Aligned_cols=151 Identities=23% Similarity=0.363 Sum_probs=124.2
Q ss_pred CCCCCCCCCCC-----cccce-EEcCCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeec
Q 005880 45 LTTWNSTSDPC-----SWTGV-SCLQNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFL 118 (672)
Q Consensus 45 ~~~W~~~~~~c-----~w~gv-~c~~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l 118 (672)
+.+|..+.++| .|.|+ .|..++++.|+|++|+|++.++.+. ++|++|+|++|+|+. +| ..+++|++|+|
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~lp~~l~--~~L~~L~Ls~N~l~~-ip--~~l~~L~~L~L 107 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLINQFSELQLNRLNLSSLPDNLP--PQITVLEITQNALIS-LP--ELPASLEYLDA 107 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSCCCSCCC--TTCSEEECCSSCCSC-CC--CCCTTCCEEEC
T ss_pred HHHHhccCCccccccchhhhccccccCCccEEEeCCCCCCccCHhHc--CCCCEEECcCCCCcc-cc--cccCCCCEEEc
Confidence 44676666788 79999 7988899999999999999766563 789999999999995 55 66899999999
Q ss_pred cccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCC
Q 005880 119 SHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 119 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p 198 (672)
++|+|++ +|. +++ +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ ++. .+++|+.|+|++|+|++ +|
T Consensus 108 s~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~L~~-lp 176 (571)
T 3cvr_A 108 CDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE-LPTSLEVLSVRNNQLTF-LP 176 (571)
T ss_dssp CSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CC
T ss_pred cCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC-cCCCcCEEECCCCCCCC-cc
Confidence 9999996 888 766 99999999999996 776 68999999999999998 333 67899999999999996 88
Q ss_pred CcCC-CCCCcccccc
Q 005880 199 KSLS-GFPDSAFTQN 212 (672)
Q Consensus 199 ~~l~-~~~~~~~~~n 212 (672)
. |. ++..+.+.+|
T Consensus 177 ~-l~~~L~~L~Ls~N 190 (571)
T 3cvr_A 177 E-LPESLEALDVSTN 190 (571)
T ss_dssp C-CCTTCCEEECCSS
T ss_pred h-hhCCCCEEECcCC
Confidence 7 54 3344444444
No 307
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=3.3e-16 Score=149.69 Aligned_cols=125 Identities=28% Similarity=0.227 Sum_probs=104.6
Q ss_pred EEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccc
Q 005880 69 HLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFS 148 (672)
Q Consensus 69 ~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 148 (672)
.+++++|+|+..+..+. ++|++|+|++|+|+..++.|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+
T Consensus 14 ~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~ 91 (193)
T 2wfh_A 14 VVRCSNKGLKVLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91 (193)
T ss_dssp EEECTTSCCSSCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred EEEcCCCCCCcCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccC
Confidence 56777788887665553 5899999999999865558899999999999999999777788999999999999999999
Q ss_pred cccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCC
Q 005880 149 GQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSG 195 (672)
Q Consensus 149 g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g 195 (672)
+..|..|.++++|+.|+|++|+|++..+ +..+++|+.|+|++|.+.+
T Consensus 92 ~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 92 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp BCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred EeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 8777789999999999999999987333 4578889999888888764
No 308
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.66 E-value=5.9e-16 Score=168.64 Aligned_cols=133 Identities=21% Similarity=0.238 Sum_probs=117.1
Q ss_pred CCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeec
Q 005880 88 TQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKL 166 (672)
Q Consensus 88 ~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 166 (672)
++|++|+|++|.+++.+| .++++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+.++++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 689999999999999888 7999999999999999999888999999999999999999999888899999999999999
Q ss_pred cCCcccCc--CCCCCCCCCCeeeccCCcCCCCCCCcCCC---CCCccccccccccCCCC
Q 005880 167 EANRFSGP--ITGLDLRNLQDFNVSGNHLSGQIPKSLSG---FPDSAFTQNAALCGSPM 220 (672)
Q Consensus 167 ~~N~l~~~--~~~~~l~~L~~l~l~~N~l~g~~p~~l~~---~~~~~~~~n~~lc~~~~ 220 (672)
++|++++. ..+..+++|++|+|++|+|++..+..+.. +..+.+.+|+..|++|.
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 99999884 34678999999999999999655545554 44556678999999873
No 309
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.66 E-value=1.4e-16 Score=180.38 Aligned_cols=144 Identities=17% Similarity=0.121 Sum_probs=130.0
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
..++.|+|++|.+++..+. |.++++|++|+|++|++++..| .|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 4789999999999998665 9999999999999999999887 7999999999999999999889999999999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccC-c-CCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcc
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-P-ITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSA 208 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~-~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~ 208 (672)
++|++++..|..++++++|++|+|++|++++ + .....+++|++|++++|.+++..|..+..++.+.
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 180 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQAT 180 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccc
Confidence 9999997778889999999999999999998 4 3455699999999999999977777666666544
No 310
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.66 E-value=3.1e-16 Score=175.76 Aligned_cols=155 Identities=23% Similarity=0.290 Sum_probs=130.8
Q ss_pred CCcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCC--C-CCCcccccceeeccccccCCCCChh-hhccCCCC
Q 005880 64 QNRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPV--P-SLSNLTALKLLFLSHNNFNGEFPDS-VSSLFRLY 138 (672)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~--p-~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~ 138 (672)
..+++.|+|++|.+++..+. +..+++|++|+|++|++++.. | .+.++++|++|+|++|++++.+|.. +..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 36789999999999985544 899999999999999999854 3 6899999999999999999867764 78889999
Q ss_pred eEecccCccccccchhhcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCc-CCCCC---Cccccccc
Q 005880 139 RLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKS-LSGFP---DSAFTQNA 213 (672)
Q Consensus 139 ~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~-l~~~~---~~~~~~n~ 213 (672)
+|+|++|+|++.+|..+. ++|+.|+|++|+|+. +.....+++|+.|+|++|+|+ .+|.. +..++ .+.+.+|+
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~ 508 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNP 508 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCC
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCC
Confidence 999999999988887665 789999999999997 444568999999999999999 68865 66555 45567899
Q ss_pred cccCCCCc
Q 005880 214 ALCGSPMQ 221 (672)
Q Consensus 214 ~lc~~~~~ 221 (672)
+.|+|++.
T Consensus 509 ~~c~c~~~ 516 (562)
T 3a79_B 509 WDCTCPGI 516 (562)
T ss_dssp BCCCHHHH
T ss_pred cCCCcchH
Confidence 99998754
No 311
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.65 E-value=1.6e-16 Score=178.21 Aligned_cols=159 Identities=19% Similarity=0.173 Sum_probs=138.1
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC--CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP--SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
.+++.|+|++|.+.+.++.+..+++|++|+|++|.+++.+| .+.++++|++|+|++|.+++.+|..+.++++|+.|+|
T Consensus 373 ~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 452 (570)
T 2z63_A 373 TSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 452 (570)
T ss_dssp SCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred CccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEEC
Confidence 56778888888887776668889999999999999998876 6899999999999999999999999999999999999
Q ss_pred ccCccc-cccchhhcCCCccCeeeccCCcccCc--CCCCCCCCCCeeeccCCcCCCCCCCcCCCCCC---cccccccccc
Q 005880 143 SFNNFS-GQIPLTVNHLTHLLTLKLEANRFSGP--ITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPD---SAFTQNAALC 216 (672)
Q Consensus 143 ~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~---~~~~~n~~lc 216 (672)
++|+++ +.+|..+..+++|++|+|++|++++. ..+..+++|+.|++++|++++..|..+..++. +.+.+|++.|
T Consensus 453 ~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 532 (570)
T 2z63_A 453 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 532 (570)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccC
Confidence 999998 68999999999999999999999984 34568999999999999999877777766554 4566899999
Q ss_pred CCCCccc
Q 005880 217 GSPMQAC 223 (672)
Q Consensus 217 ~~~~~~c 223 (672)
++|...+
T Consensus 533 ~~~~~~~ 539 (570)
T 2z63_A 533 SCPRIDY 539 (570)
T ss_dssp CTTTTHH
T ss_pred CCcchHH
Confidence 9876544
No 312
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.65 E-value=2.4e-16 Score=178.99 Aligned_cols=157 Identities=25% Similarity=0.279 Sum_probs=134.1
Q ss_pred CcEeEEEecCCCcccCCCC--CCCCCCccEEEcccCCCCCCCC-CCCcccccceeecccccc-CCCCChhhhccCCCCeE
Q 005880 65 NRVSHLVLENLQLSGSLQP--LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNF-NGEFPDSVSSLFRLYRL 140 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~--l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l-~g~~p~~~~~l~~L~~L 140 (672)
..++.+++..+++....+. +..+++|+.++++.|.+++..+ .+..+++|+.|+|++|++ .+.+|..|..+++|++|
T Consensus 420 ~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L 499 (635)
T 4g8a_A 420 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 499 (635)
T ss_dssp TTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred ccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEE
Confidence 3556667776666655443 7888999999999999999888 788999999999999985 44678899999999999
Q ss_pred ecccCccccccchhhcCCCccCeeeccCCcccCcC--CCCCCCCCCeeeccCCcCCCCCCCcCCCC----CCcccccccc
Q 005880 141 DLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPI--TGLDLRNLQDFNVSGNHLSGQIPKSLSGF----PDSAFTQNAA 214 (672)
Q Consensus 141 ~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~l~~L~~l~l~~N~l~g~~p~~l~~~----~~~~~~~n~~ 214 (672)
+|++|+|++..|..|.++++|++|+|++|+|++.. .+..+++|+.|+|++|+|++..|..+..+ ..+.+.+||+
T Consensus 500 ~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~ 579 (635)
T 4g8a_A 500 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579 (635)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCB
T ss_pred ECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCC
Confidence 99999999999999999999999999999999844 35789999999999999999999887655 4466779999
Q ss_pred ccCCCCc
Q 005880 215 LCGSPMQ 221 (672)
Q Consensus 215 lc~~~~~ 221 (672)
.|+|.+.
T Consensus 580 ~C~C~~~ 586 (635)
T 4g8a_A 580 ACTCEHQ 586 (635)
T ss_dssp CCSGGGH
T ss_pred cccCCcH
Confidence 9999764
No 313
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.64 E-value=3.6e-16 Score=183.53 Aligned_cols=158 Identities=23% Similarity=0.282 Sum_probs=136.1
Q ss_pred CcccceEEcCCcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCC-C-CCCcccccceeeccccccCCCCChhh
Q 005880 55 CSWTGVSCLQNRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPV-P-SLSNLTALKLLFLSHNNFNGEFPDSV 131 (672)
Q Consensus 55 c~w~gv~c~~~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~-p-~~~~l~~L~~L~l~~N~l~g~~p~~~ 131 (672)
|.|..|.+...+++.|+|++|.+++..+. |.++++|++|+|++|.+.+.+ | .|.++++|++|+|++|++++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 56777777668999999999999987655 999999999999999777665 4 79999999999999999998889999
Q ss_pred hccCCCCeEecccCccccccchh--hcCCCccCeeeccCCcccCcC---CCCCCCCCCeeeccCCcCCCCCCCcCC----
Q 005880 132 SSLFRLYRLDLSFNNFSGQIPLT--VNHLTHLLTLKLEANRFSGPI---TGLDLRNLQDFNVSGNHLSGQIPKSLS---- 202 (672)
Q Consensus 132 ~~l~~L~~L~l~~N~l~g~~p~~--~~~l~~L~~L~l~~N~l~~~~---~~~~l~~L~~l~l~~N~l~g~~p~~l~---- 202 (672)
+++++|++|+|++|++++.+|.. |+++++|++|+|++|++++.. .+..+++|++|+|++|.+++..|..+.
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~ 173 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQG 173 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHH
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccC
Confidence 99999999999999999877776 999999999999999998833 257899999999999999988887764
Q ss_pred -CCCCcccccc
Q 005880 203 -GFPDSAFTQN 212 (672)
Q Consensus 203 -~~~~~~~~~n 212 (672)
++..+.+.+|
T Consensus 174 ~~L~~L~L~~n 184 (844)
T 3j0a_A 174 KTLSFFSLAAN 184 (844)
T ss_dssp CSSCCCEECCS
T ss_pred CccceEECCCC
Confidence 3444444444
No 314
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.64 E-value=3.7e-16 Score=176.84 Aligned_cols=138 Identities=23% Similarity=0.224 Sum_probs=70.3
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC--CCCcccccceeeccccccCCCCChhhhccCCCCeEe
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP--SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLD 141 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 141 (672)
.+++.|+|++|.+.+..+. +..+++|++|+|++|++++..| .+.++++|++|+|++|.+++..|..++++++|++|+
T Consensus 376 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 455 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLN 455 (606)
T ss_dssp TTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEE
Confidence 4566666666666555433 5555555556555555555443 255555555555555555555555555555555555
Q ss_pred cccCccccc---cchhhcCCCccCeeeccCCcccCc--CCCCCCCCCCeeeccCCcCCCCCCCcCC
Q 005880 142 LSFNNFSGQ---IPLTVNHLTHLLTLKLEANRFSGP--ITGLDLRNLQDFNVSGNHLSGQIPKSLS 202 (672)
Q Consensus 142 l~~N~l~g~---~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~l~~L~~l~l~~N~l~g~~p~~l~ 202 (672)
|++|++++. .+..+..+++|++|+|++|++++. ..+..+++|+.|+|++|++++..|..+.
T Consensus 456 L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 521 (606)
T 3t6q_A 456 LQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALS 521 (606)
T ss_dssp CTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGT
T ss_pred CCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhC
Confidence 555555441 113344455555555555555442 1233444444444444444444444333
No 315
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.1e-15 Score=145.95 Aligned_cols=128 Identities=25% Similarity=0.288 Sum_probs=110.3
Q ss_pred cEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCc
Q 005880 91 RVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANR 170 (672)
Q Consensus 91 ~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 170 (672)
+.+++++|+++..+..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 689999999997665554 68999999999999 899999999999999999999998878899999999999999999
Q ss_pred ccCcC--CCCCCCCCCeeeccCCcCCCCCCCcCCCC---CCccccccccccCCCCc
Q 005880 171 FSGPI--TGLDLRNLQDFNVSGNHLSGQIPKSLSGF---PDSAFTQNAALCGSPMQ 221 (672)
Q Consensus 171 l~~~~--~~~~l~~L~~l~l~~N~l~g~~p~~l~~~---~~~~~~~n~~lc~~~~~ 221 (672)
|++.. .+..+++|+.|+|++|+|++..+..|..+ ..+.+.+|++.|+|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~ 145 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQ 145 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGH
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCH
Confidence 99944 36789999999999999995444455544 45566789999998764
No 316
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.64 E-value=3.6e-16 Score=149.99 Aligned_cols=128 Identities=22% Similarity=0.366 Sum_probs=112.9
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
.+++.|++++|.++. ++.+..+++|++|+|++|++++..+ .++++++|++|+|++|++++..|..++++++|++|+|+
T Consensus 66 ~~L~~L~l~~n~~~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~ 144 (197)
T 4ezg_A 66 HNIKDLTINNIHATN-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLS 144 (197)
T ss_dssp TTCSEEEEESCCCSC-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECC
T ss_pred CCCCEEEccCCCCCc-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEcc
Confidence 579999999997764 3468999999999999999998544 89999999999999999998899999999999999999
Q ss_pred cCc-cccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCC
Q 005880 144 FNN-FSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSG 195 (672)
Q Consensus 144 ~N~-l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g 195 (672)
+|+ ++ .+| .+..+++|+.|++++|++++......+++|+.|++++|++.+
T Consensus 145 ~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 145 YNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp SCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred CCCCcc-ccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 998 65 677 799999999999999999996677889999999999999874
No 317
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.64 E-value=2e-16 Score=175.46 Aligned_cols=154 Identities=23% Similarity=0.312 Sum_probs=110.0
Q ss_pred CcEeEEEecCCCcccCCC-CCCCCCCccEEEcccCCCCC--CCC-CCCcccccceeeccccccCCCCChh-hhccCCCCe
Q 005880 65 NRVSHLVLENLQLSGSLQ-PLTSLTQLRVLSLKYNRFTG--PVP-SLSNLTALKLLFLSHNNFNGEFPDS-VSSLFRLYR 139 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~-~l~~l~~L~~L~L~~N~l~~--~~p-~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~ 139 (672)
.+++.|+|++|.+++..+ .++.+++|++|+|++|++++ .+| .++++++|++|+|++|++++.+|.. +..+++|+.
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~ 403 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLS 403 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCE
T ss_pred CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCE
Confidence 567777777777777443 37777777777777777775 233 4677777777777777777656654 666777777
Q ss_pred EecccCccccccchhhcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCc-CCCCC---Ccccccccc
Q 005880 140 LDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKS-LSGFP---DSAFTQNAA 214 (672)
Q Consensus 140 L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~-l~~~~---~~~~~~n~~ 214 (672)
|+|++|++++.+|..+. ++|+.|+|++|+|+. +.....+++|+.|++++|+|+ .+|.. +..++ .+.+.+|++
T Consensus 404 L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~ 480 (520)
T 2z7x_B 404 LNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPW 480 (520)
T ss_dssp EECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCC
Confidence 77777777777766554 678888888888875 333457889999999999998 67765 55544 455668999
Q ss_pred ccCCCCc
Q 005880 215 LCGSPMQ 221 (672)
Q Consensus 215 lc~~~~~ 221 (672)
.|+|++.
T Consensus 481 ~c~c~~~ 487 (520)
T 2z7x_B 481 DCSCPRI 487 (520)
T ss_dssp CCCHHHH
T ss_pred cccCCch
Confidence 8888754
No 318
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.63 E-value=8.7e-17 Score=182.63 Aligned_cols=143 Identities=18% Similarity=0.334 Sum_probs=130.4
Q ss_pred CcEeEEEecCCCccc------------------CCCCCC--CCCCccEEEcccCCCCCCCC-CCCcccccceeeccccc-
Q 005880 65 NRVSHLVLENLQLSG------------------SLQPLT--SLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNN- 122 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~------------------~~~~l~--~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~- 122 (672)
.+++.|+|++|.++| .++.++ ++++|++|+|++|++.+.+| .++++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~ 285 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRG 285 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCC
Confidence 689999999999999 666788 99999999999999999988 89999999999999998
Q ss_pred cCC-CCChhhhcc------CCCCeEecccCccccccch--hhcCCCccCeeeccCCcccCcCC-CCCCCCCCeeeccCCc
Q 005880 123 FNG-EFPDSVSSL------FRLYRLDLSFNNFSGQIPL--TVNHLTHLLTLKLEANRFSGPIT-GLDLRNLQDFNVSGNH 192 (672)
Q Consensus 123 l~g-~~p~~~~~l------~~L~~L~l~~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~~~~~-~~~l~~L~~l~l~~N~ 192 (672)
++| .+|..++++ ++|++|+|++|+++ .+|. .++++++|++|+|++|+++|.++ +..+++|+.|++++|+
T Consensus 286 l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N~ 364 (636)
T 4eco_A 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQ 364 (636)
T ss_dssp SCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSSE
T ss_pred CccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCCc
Confidence 999 899999987 99999999999999 8998 99999999999999999998554 5578899999999999
Q ss_pred CCCCCCCcCCCCCC-ccc
Q 005880 193 LSGQIPKSLSGFPD-SAF 209 (672)
Q Consensus 193 l~g~~p~~l~~~~~-~~~ 209 (672)
++ .+|..+..++. +..
T Consensus 365 l~-~lp~~l~~l~~~L~~ 381 (636)
T 4eco_A 365 IT-EIPANFCGFTEQVEN 381 (636)
T ss_dssp EE-ECCTTSEEECTTCCE
T ss_pred cc-cccHhhhhhcccCcE
Confidence 99 89988876665 443
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.63 E-value=1.5e-16 Score=164.37 Aligned_cols=134 Identities=24% Similarity=0.279 Sum_probs=86.3
Q ss_pred CcEeEEEecCCCcccCCCC-C--CCCCCccEEEcccCCCCCCCCCCCcc-----cccceeeccccccCCCCChhhhccCC
Q 005880 65 NRVSHLVLENLQLSGSLQP-L--TSLTQLRVLSLKYNRFTGPVPSLSNL-----TALKLLFLSHNNFNGEFPDSVSSLFR 136 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l--~~l~~L~~L~L~~N~l~~~~p~~~~l-----~~L~~L~l~~N~l~g~~p~~~~~l~~ 136 (672)
.++++|+|++|.+++..+. + ..+++|++|+|++|++++.++.++++ ++|++|+|++|++++..|..|+++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 4677777777777765444 3 66777777777777777663345555 67777777777777666667777777
Q ss_pred CCeEecccCccccc--cchhh--cCCCccCeeeccCCcccC--cCC---CCCCCCCCeeeccCCcCCCCCC
Q 005880 137 LYRLDLSFNNFSGQ--IPLTV--NHLTHLLTLKLEANRFSG--PIT---GLDLRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 137 L~~L~l~~N~l~g~--~p~~~--~~l~~L~~L~l~~N~l~~--~~~---~~~l~~L~~l~l~~N~l~g~~p 198 (672)
|++|+|++|+++|. +|..+ .++++|++|+|++|+|++ .++ ...+++|+.|+|++|++++.+|
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 245 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc
Confidence 77777777776654 23344 666777777777777764 111 1255667777777777766554
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.63 E-value=9.8e-17 Score=176.08 Aligned_cols=150 Identities=18% Similarity=0.078 Sum_probs=126.9
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhh-ccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVS-SLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l 142 (672)
..++.|+|++|.+++.++. .+++|+.|+|++|.|++.+| .++++++|++|+|++|.|++.+|..+. ++++|+.|+|
T Consensus 99 ~~L~~L~L~~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~L 176 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred CCcCEEECcCCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEec
Confidence 5677888888888776553 46899999999999999887 899999999999999999998998887 7999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCcCCCCC---CccccccccccCC
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKSLSGFP---DSAFTQNAALCGS 218 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~---~~~~~~n~~lc~~ 218 (672)
++|.|++. |. +..+++|+.|+|++|+|++ +..+..+++|+.|+|++|.|++ +|..+..++ .+.+.+|++.|++
T Consensus 177 s~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~ 253 (487)
T 3oja_A 177 QYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGT 253 (487)
T ss_dssp TTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHH
T ss_pred CCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcc
Confidence 99999965 33 4469999999999999999 3446688999999999999994 887776555 4556689888875
Q ss_pred C
Q 005880 219 P 219 (672)
Q Consensus 219 ~ 219 (672)
.
T Consensus 254 ~ 254 (487)
T 3oja_A 254 L 254 (487)
T ss_dssp H
T ss_pred h
Confidence 4
No 321
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.63 E-value=3.8e-16 Score=154.68 Aligned_cols=139 Identities=14% Similarity=0.096 Sum_probs=121.2
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCC-CCCCCC-CCCcccccceeeccc-cccCCCCChhhhccCCCCeE
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNR-FTGPVP-SLSNLTALKLLFLSH-NNFNGEFPDSVSSLFRLYRL 140 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~-l~~~~p-~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~~L~~L 140 (672)
..++.|+|++|++++.++. +..+++|++|+|++|. +++..+ .|.++++|++|+|++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 5799999999999998875 8999999999999997 888777 789999999999999 99996666789999999999
Q ss_pred ecccCccccccchhhcCCCccC---eeeccCC-cccCcC--CCCCCCCCC-eeeccCCcCCCCCCCcCCCCCC
Q 005880 141 DLSFNNFSGQIPLTVNHLTHLL---TLKLEAN-RFSGPI--TGLDLRNLQ-DFNVSGNHLSGQIPKSLSGFPD 206 (672)
Q Consensus 141 ~l~~N~l~g~~p~~~~~l~~L~---~L~l~~N-~l~~~~--~~~~l~~L~-~l~l~~N~l~g~~p~~l~~~~~ 206 (672)
+|++|++++ +|. +..+++|+ +|++++| ++++.. .+..+++|+ .|++++|+++ .+|......+.
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~ 180 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTK 180 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCE
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCC
Confidence 999999995 776 88899998 9999999 998833 366899999 9999999999 77765433343
No 322
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.63 E-value=9.3e-16 Score=175.97 Aligned_cols=136 Identities=24% Similarity=0.312 Sum_probs=111.9
Q ss_pred CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCC----C----hhhhccCCCCeEecccCccccccch-
Q 005880 84 LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEF----P----DSVSSLFRLYRLDLSFNNFSGQIPL- 153 (672)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~----p----~~~~~l~~L~~L~l~~N~l~g~~p~- 153 (672)
+..+++|++|+|++|++++.++ .+.++++|++|+|++|++++.. | ..|.++++|+.|+|++|+|+ .+|.
T Consensus 476 ~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~ 554 (680)
T 1ziw_A 476 FQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVE 554 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTT
T ss_pred cccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHH
Confidence 7788889999999999998777 5888999999999999888531 1 23788899999999999998 5554
Q ss_pred hhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCCC----cCCCCCCccccccccccCCCC
Q 005880 154 TVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIPK----SLSGFPDSAFTQNAALCGSPM 220 (672)
Q Consensus 154 ~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p~----~l~~~~~~~~~~n~~lc~~~~ 220 (672)
.|.++++|+.|+|++|+|++..+ +..+++|+.|+|++|+|++..|. .+.++..+.+.+|++.|+|+.
T Consensus 555 ~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 555 VFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred HcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 68999999999999999998333 45789999999999999976665 356777888889999999874
No 323
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.63 E-value=2.1e-16 Score=163.19 Aligned_cols=147 Identities=18% Similarity=0.205 Sum_probs=101.6
Q ss_pred cEeEEEecCCCccc-CCCC-CC-------CCCCccEEEcccCCCCCCCC-CC--CcccccceeeccccccCCCCChhhhc
Q 005880 66 RVSHLVLENLQLSG-SLQP-LT-------SLTQLRVLSLKYNRFTGPVP-SL--SNLTALKLLFLSHNNFNGEFPDSVSS 133 (672)
Q Consensus 66 ~v~~L~l~~~~l~~-~~~~-l~-------~l~~L~~L~L~~N~l~~~~p-~~--~~l~~L~~L~l~~N~l~g~~p~~~~~ 133 (672)
.++.|+|++|.+.. ..+. +. ++++|++|+|++|++++.+| .+ .++++|++|+|++|++++. |..+++
T Consensus 64 ~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~ 142 (312)
T 1wwl_A 64 IIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAE 142 (312)
T ss_dssp HHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHH
T ss_pred HHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHH
Confidence 36777777777743 3332 32 57788888888888887666 44 7788888888888888865 777777
Q ss_pred c-----CCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcC------CCCCCCCCCeeeccCCcCCC--CCCCc
Q 005880 134 L-----FRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPI------TGLDLRNLQDFNVSGNHLSG--QIPKS 200 (672)
Q Consensus 134 l-----~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~------~~~~l~~L~~l~l~~N~l~g--~~p~~ 200 (672)
+ ++|++|+|++|+|++..|..|+++++|++|+|++|++.+.. ....+++|++|+|++|+|++ .++..
T Consensus 143 l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 222 (312)
T 1wwl_A 143 LQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSA 222 (312)
T ss_dssp HHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHH
T ss_pred HHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHH
Confidence 7 78888888888888766677888888888888888876531 12567788888888888872 22322
Q ss_pred ----CCCCCCccccccc
Q 005880 201 ----LSGFPDSAFTQNA 213 (672)
Q Consensus 201 ----l~~~~~~~~~~n~ 213 (672)
+.++..+.+.+|.
T Consensus 223 ~~~~l~~L~~L~Ls~N~ 239 (312)
T 1wwl_A 223 LAAARVQLQGLDLSHNS 239 (312)
T ss_dssp HHHTTCCCSEEECTTSC
T ss_pred HHhcCCCCCEEECCCCc
Confidence 2455555555553
No 324
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.63 E-value=1.5e-15 Score=158.20 Aligned_cols=155 Identities=21% Similarity=0.354 Sum_probs=121.6
Q ss_pred CCcccceEEcC-----------CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccc
Q 005880 54 PCSWTGVSCLQ-----------NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSH 120 (672)
Q Consensus 54 ~c~w~gv~c~~-----------~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~ 120 (672)
.|.|+.+.|.. ..++.|+|++|.+++.++. |.++++|++|+|++|++++..| .++++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 47899999963 3688999999999998874 9999999999999999999877 899999999999999
Q ss_pred cccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccC----cCCCCCCCCCCeeeccCCcCCCC
Q 005880 121 NNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG----PITGLDLRNLQDFNVSGNHLSGQ 196 (672)
Q Consensus 121 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~----~~~~~~l~~L~~l~l~~N~l~g~ 196 (672)
|+++ .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|+++. +..+..+++|+.|++++|.++ .
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~ 185 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-T 185 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-S
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-c
Confidence 9999 7787665 688888888888887666778888888888888888853 222446777777777777777 4
Q ss_pred CCCcC-CCCCCcccccc
Q 005880 197 IPKSL-SGFPDSAFTQN 212 (672)
Q Consensus 197 ~p~~l-~~~~~~~~~~n 212 (672)
+|..+ .++..+.+.+|
T Consensus 186 l~~~~~~~L~~L~l~~n 202 (330)
T 1xku_A 186 IPQGLPPSLTELHLDGN 202 (330)
T ss_dssp CCSSCCTTCSEEECTTS
T ss_pred CCccccccCCEEECCCC
Confidence 55433 33444444443
No 325
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.63 E-value=2.3e-16 Score=173.10 Aligned_cols=139 Identities=17% Similarity=0.105 Sum_probs=121.5
Q ss_pred CCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 64 QNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
..+++.|+|++|.|++.++ .++|++|+|++|.|++.++. .+++|+.|+|++|.|++..|..++++++|+.|+|+
T Consensus 79 l~~L~~L~Ls~N~l~~l~~----~~~L~~L~L~~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 152 (487)
T 3oja_A 79 LSTLRTLDLNNNYVQELLV----GPSIETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLK 152 (487)
T ss_dssp CTTCCEEECCSSEEEEEEE----CTTCCEEECCSSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECT
T ss_pred CCCCCEEEecCCcCCCCCC----CCCcCEEECcCCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECC
Confidence 3689999999999997654 38999999999999987763 46889999999999999889999999999999999
Q ss_pred cCccccccchhhc-CCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCccc
Q 005880 144 FNNFSGQIPLTVN-HLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAF 209 (672)
Q Consensus 144 ~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~ 209 (672)
+|+|++.+|..+. .+++|+.|+|++|+|++..+...+++|+.|+|++|.|++ +|..+..++.+..
T Consensus 153 ~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~ 218 (487)
T 3oja_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTW 218 (487)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSE
T ss_pred CCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCCCCCCC-CCHhHcCCCCccE
Confidence 9999998998886 899999999999999997666679999999999999996 5555666555543
No 326
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.63 E-value=1e-15 Score=156.30 Aligned_cols=142 Identities=30% Similarity=0.374 Sum_probs=120.6
Q ss_pred CCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 64 QNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
..+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +|.+.++++|++|+|++|++++ + ..+..+++|+.|+|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~ 142 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKD-LSSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLG 142 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-GGGGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECC
T ss_pred CCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCC-ChhhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEcc
Confidence 3689999999999998766 9999999999999999997 4569999999999999999995 4 578999999999999
Q ss_pred cCccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcc---ccccc
Q 005880 144 FNNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSA---FTQNA 213 (672)
Q Consensus 144 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~---~~~n~ 213 (672)
+|++++. ..+..+++|+.|+|++|++++..+...+++|+.|++++|.+++ +|. +..++.+. +.+|+
T Consensus 143 ~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l~~-l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 143 NNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LRA-LAGLKNLDVLELFSQE 211 (291)
T ss_dssp SSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CGG-GTTCTTCSEEEEEEEE
T ss_pred CCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-Chh-hccCCCCCEEECcCCc
Confidence 9999954 6789999999999999999986568889999999999999984 553 55555544 44554
No 327
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=2.8e-16 Score=182.29 Aligned_cols=153 Identities=18% Similarity=0.219 Sum_probs=134.0
Q ss_pred CcccceEE---cCCcEeEEEecCCCccc------------------CCCCCC--CCCCccEEEcccCCCCCCCC-CCCcc
Q 005880 55 CSWTGVSC---LQNRVSHLVLENLQLSG------------------SLQPLT--SLTQLRVLSLKYNRFTGPVP-SLSNL 110 (672)
Q Consensus 55 c~w~gv~c---~~~~v~~L~l~~~~l~~------------------~~~~l~--~l~~L~~L~L~~N~l~~~~p-~~~~l 110 (672)
+...|+.- ...+++.|+|++|.|+| .++.++ ++++|++|+|++|++.+.+| .|++|
T Consensus 435 N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L 514 (876)
T 4ecn_A 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDL 514 (876)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGC
T ss_pred CcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCC
Confidence 44555432 23689999999999999 666687 99999999999999999998 89999
Q ss_pred cccceeeccccc-cCC-CCChhhhccC-------CCCeEecccCccccccch--hhcCCCccCeeeccCCcccCcCCCCC
Q 005880 111 TALKLLFLSHNN-FNG-EFPDSVSSLF-------RLYRLDLSFNNFSGQIPL--TVNHLTHLLTLKLEANRFSGPITGLD 179 (672)
Q Consensus 111 ~~L~~L~l~~N~-l~g-~~p~~~~~l~-------~L~~L~l~~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~~ 179 (672)
++|+.|+|++|+ |+| .+|..+++++ +|+.|+|++|+|+ .+|. .++++++|+.|+|++|+|+....+..
T Consensus 515 ~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~lp~~~~ 593 (876)
T 4ecn_A 515 PELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRHLEAFGT 593 (876)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCBCCCCCT
T ss_pred CCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcccchhhcC
Confidence 999999999998 998 8999998887 9999999999999 8999 99999999999999999995225678
Q ss_pred CCCCCeeeccCCcCCCCCCCcCCCCCC-ccc
Q 005880 180 LRNLQDFNVSGNHLSGQIPKSLSGFPD-SAF 209 (672)
Q Consensus 180 l~~L~~l~l~~N~l~g~~p~~l~~~~~-~~~ 209 (672)
+++|+.|+|++|+++ .+|..+..++. +..
T Consensus 594 L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~ 623 (876)
T 4ecn_A 594 NVKLTDLKLDYNQIE-EIPEDFCAFTDQVEG 623 (876)
T ss_dssp TSEESEEECCSSCCS-CCCTTSCEECTTCCE
T ss_pred CCcceEEECcCCccc-cchHHHhhccccCCE
Confidence 999999999999999 99988877666 543
No 328
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=165.25 Aligned_cols=141 Identities=23% Similarity=0.215 Sum_probs=101.5
Q ss_pred ccceEEcC-----------CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeecccccc
Q 005880 57 WTGVSCLQ-----------NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNF 123 (672)
Q Consensus 57 w~gv~c~~-----------~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l 123 (672)
|..|.|.. ..++.|+|++|++++..+. |.++++|++|+|++|+|++..+ .|.++++|++|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 56788853 4678899999999887754 8888889999999988888776 788888888888888888
Q ss_pred CCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcC---CCCCCCCCCeeeccCCcCCCCCC
Q 005880 124 NGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPI---TGLDLRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 124 ~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~---~~~~l~~L~~l~l~~N~l~g~~p 198 (672)
++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+..+.+ .+..+++|++|+|++|+++ .+|
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~ 201 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP 201 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc
Confidence 8555567888888888888888888655556666666666666664333211 2334555555555555555 444
No 329
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.62 E-value=1.1e-15 Score=172.55 Aligned_cols=109 Identities=23% Similarity=0.260 Sum_probs=93.0
Q ss_pred CcEeEEEecCCCcccCCC-CCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQ-PLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~-~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
.+++.|+|++|.+++.++ .|+.+++|++|+|++|.|++.+| .|+++++|++|+|++|.|++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 478889999999988876 48889999999999999998887 6788999999999999998544455688999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccC
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSG 173 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 173 (672)
++|+|++..|..|+++++|++|+|++|+|++
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 9999998888888889999999998888876
No 330
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=3.5e-16 Score=163.04 Aligned_cols=135 Identities=10% Similarity=0.061 Sum_probs=97.2
Q ss_pred HhcccCcCCeEEEEEEEEcCCcEEEEEEcccCCcc--------------hHH--------HHHHHHHHHcCCCCCceeee
Q 005880 364 SAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIG--------------GKR--------EFEQHMEVLGRLRHPNLVGL 421 (672)
Q Consensus 364 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--------------~~~--------~~~~e~~~l~~l~h~niv~l 421 (672)
+.+.||+|++|.||+|...+|+.||||+++..... ... ...+|...|.++.+.++.-.
T Consensus 99 I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp 178 (397)
T 4gyi_A 99 VGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVP 178 (397)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCC
T ss_pred ecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 35689999999999999989999999987532100 011 12356666777655443222
Q ss_pred EEEEEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCC
Q 005880 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT 501 (672)
Q Consensus 422 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~ 501 (672)
.-+.. ...+|||||+++++|.++... .....++.|++.+|.||| +.+||||||||.|||++++
T Consensus 179 ~p~~~--~~~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH----~~gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 179 EPIAQ--SRHTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLA----KHGLIHGDFNEFNILIREE 241 (397)
T ss_dssp CEEEE--ETTEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEEEEE
T ss_pred eeeec--cCceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHH----HCCCcCCCCCHHHEEEeCC
Confidence 22222 234799999999988765421 123568899999999999 7899999999999999877
Q ss_pred C----------cEEEeccCCCccC
Q 005880 502 G----------NARVSDFGLSIFA 515 (672)
Q Consensus 502 ~----------~~kl~DfG~a~~~ 515 (672)
+ .+.|+||+-+...
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCcccccccccceEEEEeCCcccC
Confidence 6 3899999977543
No 331
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.62 E-value=2.2e-15 Score=157.00 Aligned_cols=153 Identities=24% Similarity=0.328 Sum_probs=126.8
Q ss_pred CcccceEEcC-----------CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeecccc
Q 005880 55 CSWTGVSCLQ-----------NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHN 121 (672)
Q Consensus 55 c~w~gv~c~~-----------~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N 121 (672)
|.|+.+.|.. .+++.|+|++|.+++.++. +.++++|++|+|++|++++..| .++++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 7899999963 3689999999999988764 9999999999999999999877 8999999999999999
Q ss_pred ccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccC----cCCCCCCCCCCeeeccCCcCCCCC
Q 005880 122 NFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG----PITGLDLRNLQDFNVSGNHLSGQI 197 (672)
Q Consensus 122 ~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~----~~~~~~l~~L~~l~l~~N~l~g~~ 197 (672)
+++ .+|..+. ++|++|++++|++++..+..|.++++|+.|++++|+++. +..+..+ +|+.|++++|++++ +
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l 187 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-I 187 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-C
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-c
Confidence 999 7888776 799999999999996666679999999999999999964 2223344 88889999998884 6
Q ss_pred CCcC-CCCCCcccccc
Q 005880 198 PKSL-SGFPDSAFTQN 212 (672)
Q Consensus 198 p~~l-~~~~~~~~~~n 212 (672)
|..+ .++..+.+.+|
T Consensus 188 ~~~~~~~L~~L~l~~n 203 (332)
T 2ft3_A 188 PKDLPETLNELHLDHN 203 (332)
T ss_dssp CSSSCSSCSCCBCCSS
T ss_pred CccccCCCCEEECCCC
Confidence 6544 34555555554
No 332
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.62 E-value=1.3e-15 Score=153.04 Aligned_cols=143 Identities=22% Similarity=0.279 Sum_probs=115.2
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.+++.|++++|+++... .+..+++|++|+|++|+|++.++ +.++++|++|+|++|++++ +|.... ++|+.|+|++
T Consensus 41 ~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L~~ 115 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFLDN 115 (263)
T ss_dssp TTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEECCS
T ss_pred CcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEccC
Confidence 57889999999988654 78889999999999999998777 8899999999999999984 555333 8899999999
Q ss_pred CccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCc---ccccccccc
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDS---AFTQNAALC 216 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~---~~~~n~~lc 216 (672)
|+|++ +| .+.++++|+.|+|++|+|++......+++|+.|++++|++++. ..+..++.+ .+.+|+..+
T Consensus 116 N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 116 NELRD-TD-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp SCCSB-SG-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred CccCC-Ch-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 99985 44 5889999999999999998865677889999999999999865 455555544 444565443
No 333
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.61 E-value=2e-15 Score=155.53 Aligned_cols=125 Identities=23% Similarity=0.306 Sum_probs=86.3
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.+++.|+|++|.+++..+ +..+++|++|+|++|++++. +.+.++++|++|+|++|++++ +|. +.++++|++|+|++
T Consensus 63 ~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~ 138 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNV-SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDL 138 (308)
T ss_dssp TTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCC-GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCS
T ss_pred CCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCc-hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCC
Confidence 567777777777776555 77777777777777777763 467777777777777777774 443 67777777777777
Q ss_pred CccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCC
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSG 195 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g 195 (672)
|++++..+ +..+++|+.|+|++|++++..+...+++|+.|++++|++++
T Consensus 139 n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 139 NQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISD 187 (308)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred CccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCc
Confidence 77774333 66777777777777777764445666777777777777764
No 334
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.61 E-value=2.7e-15 Score=158.21 Aligned_cols=136 Identities=26% Similarity=0.250 Sum_probs=118.8
Q ss_pred ceEEcCCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCC-cccccceeeccccccCCCCChhhhccCC
Q 005880 59 GVSCLQNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLS-NLTALKLLFLSHNNFNGEFPDSVSSLFR 136 (672)
Q Consensus 59 gv~c~~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~-~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 136 (672)
+-.|.. ..+++++++|+..+..+. ..|+.|+|++|+|++.++ .+. ++++|++|+|++|+|++..|..|.++++
T Consensus 15 ~C~C~~---~~l~c~~~~l~~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~ 89 (361)
T 2xot_A 15 NCLCAS---NILSCSKQQLPNVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPN 89 (361)
T ss_dssp TCEEET---TEEECCSSCCSSCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred CCEECC---CEEEeCCCCcCccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCC
Confidence 456654 478999999998877664 468999999999999888 566 9999999999999999777788999999
Q ss_pred CCeEecccCccccccchhhcCCCccCeeeccCCcccCc--CCCCCCCCCCeeeccCCcCCCCCCCc
Q 005880 137 LYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGP--ITGLDLRNLQDFNVSGNHLSGQIPKS 200 (672)
Q Consensus 137 L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~l~~L~~l~l~~N~l~g~~p~~ 200 (672)
|++|+|++|+|++..+..|.++++|+.|+|++|+|++. ..+..+++|+.|+|++|+|+ .+|..
T Consensus 90 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~ 154 (361)
T 2xot_A 90 LRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVE 154 (361)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGG
T ss_pred CCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHH
Confidence 99999999999977777899999999999999999983 34678999999999999999 56654
No 335
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.61 E-value=1.8e-15 Score=155.88 Aligned_cols=142 Identities=23% Similarity=0.362 Sum_probs=121.9
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.+++.|+|++|.+++. +.+..+++|++|+|++|++++. +.+.++++|++|+|++|++++ ++. ++++++|+.|+|++
T Consensus 85 ~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~ 160 (308)
T 1h6u_A 85 TKITELELSGNPLKNV-SAIAGLQSIKTLDLTSTQITDV-TPLAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIGN 160 (308)
T ss_dssp CSCCEEECCSCCCSCC-GGGTTCTTCCEEECTTSCCCCC-GGGTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECCS
T ss_pred CCCCEEEccCCcCCCc-hhhcCCCCCCEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEccC
Confidence 6899999999999875 5699999999999999999985 459999999999999999995 444 99999999999999
Q ss_pred CccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCc---ccccccc
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDS---AFTQNAA 214 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~---~~~~n~~ 214 (672)
|++++ ++. +.++++|+.|+|++|++++..+...+++|++|++++|++++..| +..++.+ .+.+|+.
T Consensus 161 n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i 229 (308)
T 1h6u_A 161 AQVSD-LTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTI 229 (308)
T ss_dssp SCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEE
T ss_pred CcCCC-Chh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCee
Confidence 99995 444 99999999999999999986667889999999999999996553 5555554 4445654
No 336
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.60 E-value=8e-16 Score=176.53 Aligned_cols=136 Identities=24% Similarity=0.268 Sum_probs=112.5
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
.+++.|+|++|.+++.++. |.++++|++|+|++|.+++.+| .++++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 4788999999999887765 8888999999999999998877 6788899999999999998544446888999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCCCc
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIPKS 200 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p~~ 200 (672)
++|++++..|..|+++++|++|+|++|++++..+ +..+++|++|++++|.+++..|..
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 164 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEE 164 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHH
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHH
Confidence 9999987667788899999999999998887433 457888888888888888666543
No 337
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.60 E-value=1.3e-15 Score=167.19 Aligned_cols=146 Identities=19% Similarity=0.136 Sum_probs=128.3
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
.+++.|+|++|.+++..+. |.++++|++|+|++|++++.++ .|.++++|++|+|++|++++..|..|.++++|+.|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 6899999999999988655 9999999999999999998877 6899999999999999999888999999999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCCCCcCCCCCCcccc
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFT 210 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~ 210 (672)
++|++++..|..|.++++|+.|+|++|++++..+ +..+++|+.|+|++|.+++..+..+..++.+...
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L 205 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVL 205 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEE
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCccccee
Confidence 9999998888899999999999999999988433 5678999999999999997777677766655443
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.59 E-value=8.4e-16 Score=158.57 Aligned_cols=140 Identities=21% Similarity=0.234 Sum_probs=118.8
Q ss_pred CcEeEEEecCCCcccCCCC-C--CCCCCccEEEcccCCCCCCCC-----CCCcccccceeeccccccCCCCChhhhccCC
Q 005880 65 NRVSHLVLENLQLSGSLQP-L--TSLTQLRVLSLKYNRFTGPVP-----SLSNLTALKLLFLSHNNFNGEFPDSVSSLFR 136 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l--~~l~~L~~L~L~~N~l~~~~p-----~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 136 (672)
.++++|+|++|.+++..+. + ..+++|++|+|++|++++..+ .+..+++|++|+|++|++++..|..|+++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 3599999999999987776 5 899999999999999998665 2457999999999999999888899999999
Q ss_pred CCeEecccCccccc--cc--hhhcCCCccCeeeccCCcccCcCC-----CCCCCCCCeeeccCCcCCCCCCCcCCCC
Q 005880 137 LYRLDLSFNNFSGQ--IP--LTVNHLTHLLTLKLEANRFSGPIT-----GLDLRNLQDFNVSGNHLSGQIPKSLSGF 204 (672)
Q Consensus 137 L~~L~l~~N~l~g~--~p--~~~~~l~~L~~L~l~~N~l~~~~~-----~~~l~~L~~l~l~~N~l~g~~p~~l~~~ 204 (672)
|++|+|++|++.+. ++ ..++++++|++|+|++|+++.... ...+++|++|+|++|+|++.+|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 99999999998763 32 234789999999999999986222 2467999999999999998888776654
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.59 E-value=2.2e-15 Score=149.24 Aligned_cols=142 Identities=18% Similarity=0.226 Sum_probs=113.7
Q ss_pred CcEeEEEecCCC-cccCCCC-CCCCCCccEEEccc-CCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCC--
Q 005880 65 NRVSHLVLENLQ-LSGSLQP-LTSLTQLRVLSLKY-NRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLY-- 138 (672)
Q Consensus 65 ~~v~~L~l~~~~-l~~~~~~-l~~l~~L~~L~L~~-N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~-- 138 (672)
.+++.|+|++|. +++..+. |..+++|++|+|++ |++++.++ .|.++++|++|+|++|++++ +|. ++++++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 578999999997 8877764 88899999999998 99998776 68889999999999999985 776 88888888
Q ss_pred -eEecccC-ccccccchhhcCCCccC-eeeccCCcccC-cCCCCCCCCCCeeeccCCc-CCCCCCCcCCCC-CCcc
Q 005880 139 -RLDLSFN-NFSGQIPLTVNHLTHLL-TLKLEANRFSG-PITGLDLRNLQDFNVSGNH-LSGQIPKSLSGF-PDSA 208 (672)
Q Consensus 139 -~L~l~~N-~l~g~~p~~~~~l~~L~-~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~-l~g~~p~~l~~~-~~~~ 208 (672)
.|++++| ++++..+..|.++++|+ .|++++|+++. +...+..++|+.|++++|+ +++..+..|..+ +.+.
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~ 208 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPS 208 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCS
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCc
Confidence 9999999 88866666788999999 99999999885 3333344789999999994 885445566655 5444
No 340
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.59 E-value=3e-15 Score=152.89 Aligned_cols=138 Identities=28% Similarity=0.400 Sum_probs=120.6
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.+++.|++++|.+... +.+..+++|++|+|++|++++..+ +.++++|++|+|++|++++ +| .+.++++|++|+|++
T Consensus 46 ~~L~~L~l~~~~i~~~-~~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~ 121 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEH 121 (291)
T ss_dssp HTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTT
T ss_pred CcccEEEccCCCcccC-hhHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCC
Confidence 5789999999999876 558999999999999999999777 9999999999999999995 44 499999999999999
Q ss_pred CccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcccc
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFT 210 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~ 210 (672)
|+|++ + ..+..+++|+.|+|++|++++......+++|+.|++++|++++..| +..++.+...
T Consensus 122 n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L 183 (291)
T 1h6t_A 122 NGISD-I-NGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNL 183 (291)
T ss_dssp SCCCC-C-GGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred CcCCC-C-hhhcCCCCCCEEEccCCcCCcchhhccCCCCCEEEccCCccccchh--hcCCCccCEE
Confidence 99995 4 4789999999999999999987567789999999999999996554 6666655443
No 341
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.59 E-value=3.8e-15 Score=158.89 Aligned_cols=108 Identities=24% Similarity=0.310 Sum_probs=85.7
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChh-hhccCCCCeEe
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDS-VSSLFRLYRLD 141 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~ 141 (672)
.+++.|+|++|.+++.++. +..+++|++|+|++|.+++.+| .++++++|++|+|++|+++ .+|.. |.++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 4678888888888877663 7888888888888888888777 5788888888888888888 45544 57888888888
Q ss_pred cccCccccccchhhcCCCccCeeeccCCcccC
Q 005880 142 LSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG 173 (672)
Q Consensus 142 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 173 (672)
|++|++++..|..+.++++|++|++++|++++
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 88888887667778888888888888887765
No 342
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.59 E-value=9e-16 Score=172.19 Aligned_cols=143 Identities=20% Similarity=0.179 Sum_probs=124.6
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
.+++.|+|++|.+++..+. |.++++|++|+|++|++++..| .|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 4789999999999988765 9999999999999999999877 7999999999999999999877889999999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccC-cC--CCCCCCCCCeeeccCCcCCCCCCCcCCCCCCc
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PI--TGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDS 207 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~--~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~ 207 (672)
++|++++..+..++++++|++|+|++|++++ .+ .+..+++|++|++++|++++..|..+..+..+
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 175 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhcc
Confidence 9999996555579999999999999999987 33 35689999999999999997767666555444
No 343
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.59 E-value=1e-15 Score=143.93 Aligned_cols=127 Identities=17% Similarity=0.125 Sum_probs=100.1
Q ss_pred CcEeEEEecCCCcccCCCCCCCCC-CccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLT-QLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
.+++.|+|++|+++.. +.+..+. +|++|+|++|.|++. +.+.++++|++|+|++|+|++..|..+..+++|++|+|+
T Consensus 19 ~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 96 (176)
T 1a9n_A 19 VRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 96 (176)
T ss_dssp TSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred CCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECC
Confidence 5688888888888865 4555555 888889988888876 788888888888898888885444455888888888888
Q ss_pred cCccccccch--hhcCCCccCeeeccCCcccCcCC-----CCCCCCCCeeeccCCcCC
Q 005880 144 FNNFSGQIPL--TVNHLTHLLTLKLEANRFSGPIT-----GLDLRNLQDFNVSGNHLS 194 (672)
Q Consensus 144 ~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~~~~~-----~~~l~~L~~l~l~~N~l~ 194 (672)
+|+|+ .+|. .+..+++|+.|++++|+++.... ...+++|+.||+++|.+.
T Consensus 97 ~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 97 NNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp SCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 88886 6666 78888888888888888876333 457888888888888765
No 344
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.59 E-value=1e-15 Score=158.42 Aligned_cols=148 Identities=18% Similarity=0.099 Sum_probs=106.8
Q ss_pred cEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhh-ccCCCCeEecc
Q 005880 66 RVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVS-SLFRLYRLDLS 143 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~ 143 (672)
.++.|++++|.+++.++ ..+++|++|+|++|++++..+ .++++++|++|+|++|++++..|..+. .+++|++|+|+
T Consensus 100 ~L~~L~l~~n~l~~~~~--~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~ 177 (317)
T 3o53_A 100 SIETLHAANNNISRVSC--SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177 (317)
T ss_dssp TCCEEECCSSCCSEEEE--CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECT
T ss_pred CcCEEECCCCccCCcCc--cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECC
Confidence 34444444444444332 236778888888888888777 788888888888888888877677664 68888888888
Q ss_pred cCccccccchhhcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCC---ccccccccccCC
Q 005880 144 FNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPD---SAFTQNAALCGS 218 (672)
Q Consensus 144 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~---~~~~~n~~lc~~ 218 (672)
+|+|++. |. ...+++|++|+|++|+|++ +..+..+++|+.|+|++|+|+ .+|..+..++. +.+.+|+..|++
T Consensus 178 ~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~ 253 (317)
T 3o53_A 178 YNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGT 253 (317)
T ss_dssp TSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHH
T ss_pred CCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcC
Confidence 8888844 43 3358888888888888887 334567888899999999888 67876665544 445567776653
No 345
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.59 E-value=6.9e-15 Score=153.07 Aligned_cols=141 Identities=17% Similarity=0.256 Sum_probs=112.5
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCC--CCC-CCCcccccceeeccccccCCCCChhhhccCCCCeE
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTG--PVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRL 140 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~--~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L 140 (672)
..++.|++++|.+++.++. +..+++|++|+|++|.++. ..+ .+.++++|++|+|++|+++ .+|..+. ++|++|
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L 197 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTEL 197 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEE
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEE
Confidence 4788999999999887765 7888999999999998864 444 6788888888888888888 5776654 688888
Q ss_pred ecccCccccccchhhcCCCccCeeeccCCcccCcC--CCCCCCCCCeeeccCCcCCCCCCCcCCCCCCccc
Q 005880 141 DLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPI--TGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAF 209 (672)
Q Consensus 141 ~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~ 209 (672)
+|++|++++..|..+.++++|+.|+|++|++++.. .+..+++|+.|++++|+++ .+|..+..++.+..
T Consensus 198 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~ 267 (330)
T 1xku_A 198 HLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQV 267 (330)
T ss_dssp ECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCE
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCE
Confidence 88888888777888888888888888888888733 3567788888888888888 78877776665543
No 346
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.59 E-value=7.6e-15 Score=164.49 Aligned_cols=142 Identities=30% Similarity=0.384 Sum_probs=122.9
Q ss_pred CCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 64 QNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
..+++.|+|++|.|++.++ +..+++|+.|+|++|.|++ +|.+.+|++|+.|+|++|+|++ + +.+..|++|+.|+|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls 139 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIKD-LSSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLG 139 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCC-CTTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECC
T ss_pred CCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCCC-ChhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECC
Confidence 4689999999999998766 9999999999999999997 5689999999999999999995 4 469999999999999
Q ss_pred cCccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcc---ccccc
Q 005880 144 FNNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSA---FTQNA 213 (672)
Q Consensus 144 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~---~~~n~ 213 (672)
+|+|++. ..+..|++|+.|+|++|+|++..++..+++|+.|+|++|+|++ +| .+..++.|. +.+|+
T Consensus 140 ~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 140 NNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQE 208 (605)
T ss_dssp SSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECCSEE
T ss_pred CCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEccCCc
Confidence 9999964 6799999999999999999996668899999999999999995 44 455555544 44554
No 347
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=9.7e-16 Score=139.83 Aligned_cols=123 Identities=18% Similarity=0.267 Sum_probs=106.7
Q ss_pred CCCCccEEEcccCCCC-CCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCe
Q 005880 86 SLTQLRVLSLKYNRFT-GPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLT 163 (672)
Q Consensus 86 ~l~~L~~L~L~~N~l~-~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 163 (672)
..++|+.|+|++|.++ +.+| .+..+++|++|+|++|++++. ..++++++|++|+|++|++++.+|..+.++++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 4578999999999999 6666 779999999999999999965 78999999999999999999889999999999999
Q ss_pred eeccCCcccC-c--CCCCCCCCCCeeeccCCcCCCCCC---CcCCCCCCcccc
Q 005880 164 LKLEANRFSG-P--ITGLDLRNLQDFNVSGNHLSGQIP---KSLSGFPDSAFT 210 (672)
Q Consensus 164 L~l~~N~l~~-~--~~~~~l~~L~~l~l~~N~l~g~~p---~~l~~~~~~~~~ 210 (672)
|++++|++++ + .....+++|++|++++|++++..+ ..+..++.+...
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L 145 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYL 145 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEE
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccc
Confidence 9999999998 3 456789999999999999996544 356666666543
No 348
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.58 E-value=3.1e-15 Score=139.51 Aligned_cols=124 Identities=18% Similarity=0.258 Sum_probs=107.6
Q ss_pred CCCCCccEEEcccCCCC-CCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccC
Q 005880 85 TSLTQLRVLSLKYNRFT-GPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLL 162 (672)
Q Consensus 85 ~~l~~L~~L~L~~N~l~-~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~ 162 (672)
...++|+.|+|++|.++ +.+| .+..+++|++|+|++|.+++. ..++.+++|++|+|++|++++.+|..+.++++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34588999999999998 6666 679999999999999999955 8899999999999999999988999998999999
Q ss_pred eeeccCCcccC-c--CCCCCCCCCCeeeccCCcCCCCCC---CcCCCCCCcccc
Q 005880 163 TLKLEANRFSG-P--ITGLDLRNLQDFNVSGNHLSGQIP---KSLSGFPDSAFT 210 (672)
Q Consensus 163 ~L~l~~N~l~~-~--~~~~~l~~L~~l~l~~N~l~g~~p---~~l~~~~~~~~~ 210 (672)
+|+|++|+|++ + ..+..+++|+.|++++|.+++..+ ..+..++.+...
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L 152 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYL 152 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEE
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEe
Confidence 99999999998 3 346789999999999999995443 367777776655
No 349
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.58 E-value=7.9e-15 Score=152.79 Aligned_cols=140 Identities=19% Similarity=0.225 Sum_probs=88.7
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccC--CC---------------
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFN--GE--------------- 126 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~--g~--------------- 126 (672)
.+++.|+|++|.++..+..+. ++|++|+|++|++++.++ .+.++++|+.|+|++|.++ +.
T Consensus 102 ~~L~~L~L~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l 179 (332)
T 2ft3_A 102 RKLQKLYISKNHLVEIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRI 179 (332)
T ss_dssp TTCCEEECCSSCCCSCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBC
T ss_pred CCCCEEECCCCcCCccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEEC
Confidence 456666666666654443332 445555555555554443 2444444444444444443 12
Q ss_pred -------CChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccCCcCCCCC
Q 005880 127 -------FPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSGNHLSGQI 197 (672)
Q Consensus 127 -------~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~ 197 (672)
+|..+. ++|++|+|++|++++..|..+.++++|+.|+|++|++++..+ +..+++|+.|++++|+++ .+
T Consensus 180 ~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l 256 (332)
T 2ft3_A 180 SEAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RV 256 (332)
T ss_dssp CSSBCSSCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BC
T ss_pred cCCCCCccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ec
Confidence 333332 578888888888887777788888888888888888887443 567888888888888888 78
Q ss_pred CCcCCCCCCccc
Q 005880 198 PKSLSGFPDSAF 209 (672)
Q Consensus 198 p~~l~~~~~~~~ 209 (672)
|..+..++.+..
T Consensus 257 p~~l~~l~~L~~ 268 (332)
T 2ft3_A 257 PAGLPDLKLLQV 268 (332)
T ss_dssp CTTGGGCTTCCE
T ss_pred ChhhhcCccCCE
Confidence 877766655443
No 350
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.56 E-value=8.2e-16 Score=159.17 Aligned_cols=156 Identities=19% Similarity=0.173 Sum_probs=128.7
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CC-CcccccceeeccccccCCCCChhhhccCCCCeEe
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SL-SNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLD 141 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~-~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 141 (672)
..++.|+|++|.+++..+. +..+++|++|+|++|.+++..+ .+ .++++|++|+|++|++++ +|. ...+++|++|+
T Consensus 120 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~-~~~l~~L~~L~ 197 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG-QVVFAKLKTLD 197 (317)
T ss_dssp SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EEC-CCCCTTCCEEE
T ss_pred CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccc-ccccccCCEEE
Confidence 5799999999999988764 8899999999999999999776 55 479999999999999995 443 34589999999
Q ss_pred cccCccccccchhhcCCCccCeeeccCCcccC-cCCCCCCCCCCeeeccCCcCC-CCCCCcCCCCCCcccc---cccccc
Q 005880 142 LSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PITGLDLRNLQDFNVSGNHLS-GQIPKSLSGFPDSAFT---QNAALC 216 (672)
Q Consensus 142 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~l~~L~~l~l~~N~l~-g~~p~~l~~~~~~~~~---~n~~lc 216 (672)
|++|+|+ .+|..+..+++|+.|+|++|+|++ +.....+++|+.|++++|.++ +.+|..+..++.+... ++..+.
T Consensus 198 Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~ 276 (317)
T 3o53_A 198 LSSNKLA-FMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLT 276 (317)
T ss_dssp CCSSCCC-EECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCCCcCC-cchhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhcc
Confidence 9999999 466679999999999999999998 445678899999999999999 7788877777665443 344444
Q ss_pred CCCCccc
Q 005880 217 GSPMQAC 223 (672)
Q Consensus 217 ~~~~~~c 223 (672)
+.....|
T Consensus 277 ~~~~~~~ 283 (317)
T 3o53_A 277 GQNEEEC 283 (317)
T ss_dssp SSSSCCC
T ss_pred CCchhcc
Confidence 4443344
No 351
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.56 E-value=1.6e-15 Score=168.14 Aligned_cols=137 Identities=23% Similarity=0.274 Sum_probs=98.9
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
.+++.|+|++|.+++.++. |..+++|++|+|++|++++..| .|+++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 5677777777777776643 7777777777777777777666 6777777777777777777 56665 6777777777
Q ss_pred ccCcccc-ccchhhcCCCccCeeeccCCcccCcCCCCCCCCC--CeeeccCCcC--CCCCCCcCCCCC
Q 005880 143 SFNNFSG-QIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNL--QDFNVSGNHL--SGQIPKSLSGFP 205 (672)
Q Consensus 143 ~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L--~~l~l~~N~l--~g~~p~~l~~~~ 205 (672)
++|+|++ .+|..|+++++|++|+|++|++++ ..+..+++| +.|++++|.+ ++.+|..+..+.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK-SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG-GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch-hhccccccceeeEEEeecccccccccccccccccc
Confidence 7777776 467777777777777777777766 233445566 7777777777 667777666654
No 352
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.56 E-value=4.3e-15 Score=166.43 Aligned_cols=137 Identities=28% Similarity=0.282 Sum_probs=102.8
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
.+++.|+|++|.+++.++. |.++++|++|+|++|+|++..| .|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 5677888888888877653 7888888888888888887766 6788888888888888887 67766 7788888888
Q ss_pred ccCcccc-ccchhhcCCCccCeeeccCCcccCcCCCCCCCCC--CeeeccCCcC--CCCCCCcCCCCC
Q 005880 143 SFNNFSG-QIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNL--QDFNVSGNHL--SGQIPKSLSGFP 205 (672)
Q Consensus 143 ~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L--~~l~l~~N~l--~g~~p~~l~~~~ 205 (672)
++|+|++ .+|..|+++++|++|+|++|++++ ..+..+++| +.|++++|.+ ++..|..+..+.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~ 195 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ-LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPN 195 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT-TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCcccc-CchhhhhhceeeEEEeecccccccccCcccccccC
Confidence 8888875 345778888888888888888876 233344455 8888888888 777777666554
No 353
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.55 E-value=4.9e-16 Score=178.48 Aligned_cols=141 Identities=23% Similarity=0.217 Sum_probs=119.3
Q ss_pred cCCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 63 LQNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 63 ~~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
....++.|+|++|.+..+++.+..+++|++|+|++|.|+.+++.|++|++|++|+|++|+|+ .+|..|++|++|++|+|
T Consensus 222 ~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 300 (727)
T 4b8c_D 222 DDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF 300 (727)
T ss_dssp CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEEC
T ss_pred cCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEEC
Confidence 34689999999999997777788999999999999999954448999999999999999999 89999999999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccCcCCC--CCC-CCCCeeeccCCcCCCCCCCcCCCCC
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPITG--LDL-RNLQDFNVSGNHLSGQIPKSLSGFP 205 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~--~~l-~~L~~l~l~~N~l~g~~p~~l~~~~ 205 (672)
++|.|+ .+|..|++|++|+.|+|++|+|++.++. ..+ ..+..|+|++|.++|.+|..+..+.
T Consensus 301 ~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l~ 365 (727)
T 4b8c_D 301 FDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFIE 365 (727)
T ss_dssp CSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----
T ss_pred CCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccceeE
Confidence 999998 8999999999999999999999985442 111 1223578999999999998776553
No 354
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.55 E-value=1.4e-14 Score=135.30 Aligned_cols=104 Identities=22% Similarity=0.182 Sum_probs=76.2
Q ss_pred eEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCc
Q 005880 68 SHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNN 146 (672)
Q Consensus 68 ~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 146 (672)
+.|++++|+|+..+..+. ++|++|+|++|+|++.+| .|.++++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 12 ~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 12 TTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 356777777777665553 678888888888888766 67788888888888888885555566778888888888888
Q ss_pred cccccchhhcCCCccCeeeccCCcccC
Q 005880 147 FSGQIPLTVNHLTHLLTLKLEANRFSG 173 (672)
Q Consensus 147 l~g~~p~~~~~l~~L~~L~l~~N~l~~ 173 (672)
|++..+..|.++++|++|+|++|+++.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 875555567777777777777776654
No 355
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.55 E-value=1.5e-14 Score=152.13 Aligned_cols=149 Identities=27% Similarity=0.219 Sum_probs=126.5
Q ss_pred cceEEcCCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCC
Q 005880 58 TGVSCLQNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFR 136 (672)
Q Consensus 58 ~gv~c~~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 136 (672)
....|....+ .++++++++..+..+. ++|++|+|++|++++.++ .+.++++|++|+|++|++++..|..|+++++
T Consensus 26 ~~~~C~~~~~--c~~~~~~l~~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 101 (353)
T 2z80_A 26 ASLSCDRNGI--CKGSSGSLNSIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGS 101 (353)
T ss_dssp -CCEECTTSE--EECCSTTCSSCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred cCCCCCCCeE--eeCCCCCccccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCC
Confidence 3567766555 8999999998887665 589999999999999877 8999999999999999999888889999999
Q ss_pred CCeEecccCccccccchhhcCCCccCeeeccCCcccCc-C--CCCCCCCCCeeeccCCc-CCCCCCCcCCCCCCcccc
Q 005880 137 LYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGP-I--TGLDLRNLQDFNVSGNH-LSGQIPKSLSGFPDSAFT 210 (672)
Q Consensus 137 L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-~--~~~~l~~L~~l~l~~N~-l~g~~p~~l~~~~~~~~~ 210 (672)
|++|+|++|+|++..+..+.++++|++|+|++|++++. . .+..+++|++|++++|+ +++..|..+..++.+...
T Consensus 102 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L 179 (353)
T 2z80_A 102 LEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEEL 179 (353)
T ss_dssp CCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred CCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEE
Confidence 99999999999965555599999999999999999983 3 35689999999999994 665556778877776544
No 356
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.55 E-value=1.1e-14 Score=159.05 Aligned_cols=127 Identities=35% Similarity=0.403 Sum_probs=59.8
Q ss_pred cEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccC
Q 005880 66 RVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFN 145 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 145 (672)
+++.|++++|.+++..+ +..+++|+.|+|++|.+++.++ +..+++|+.|+|++|++++..| ++.+++|+.|+|++|
T Consensus 244 ~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n 319 (466)
T 1o6v_A 244 NLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 319 (466)
T ss_dssp TCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSS
T ss_pred CCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCC
Confidence 34444444444443322 4444444444444444444333 4444455555555555543222 444555555555555
Q ss_pred ccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCC
Q 005880 146 NFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 146 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p 198 (672)
++++..| +..+++|+.|++++|++++......+++|+.|++++|++++..|
T Consensus 320 ~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 320 NISDISP--VSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp CCSCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBCGG
T ss_pred cCCCchh--hccCccCCEeECCCCccCCchhhccCCCCCEEeCCCCccCccch
Confidence 5554333 44455555555555555544334445555555555555554444
No 357
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.55 E-value=1.7e-14 Score=135.60 Aligned_cols=111 Identities=25% Similarity=0.282 Sum_probs=100.3
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
..++.|+|++|++++.++. +..+++|++|+|++|+|++.++ .+.++++|++|+|++|+|++..+..+.++++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 5799999999999988776 7999999999999999998887 5799999999999999999777777899999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccCcC
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPI 175 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 175 (672)
++|+|++..+..+.++++|++|+|++|++++..
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 999999655556789999999999999998744
No 358
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.55 E-value=1.4e-14 Score=145.52 Aligned_cols=126 Identities=24% Similarity=0.295 Sum_probs=112.8
Q ss_pred CCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 64 QNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
..+++.|+|++|.+++.++ +..+++|++|+|++|++++..+ +.. ++|+.|+|++|++++ +| .+.++++|+.|+|+
T Consensus 62 l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls 136 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKNLNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIR 136 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSCCTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECT
T ss_pred CCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccCCcCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEECC
Confidence 3689999999999998776 9999999999999999998544 444 999999999999995 44 69999999999999
Q ss_pred cCccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCC
Q 005880 144 FNNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQ 196 (672)
Q Consensus 144 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~ 196 (672)
+|+|++ +| .+..+++|+.|+|++|++++......+++|+.|++++|.+++.
T Consensus 137 ~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 137 NNKLKS-IV-MLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TSCCCB-CG-GGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CCcCCC-Ch-HHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 999995 45 7999999999999999999986677899999999999999854
No 359
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.55 E-value=1.4e-14 Score=161.69 Aligned_cols=146 Identities=24% Similarity=0.222 Sum_probs=128.5
Q ss_pred EEcCCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCe
Q 005880 61 SCLQNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYR 139 (672)
Q Consensus 61 ~c~~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 139 (672)
.|....+ .++++++++..++.+. ++|++|+|++|++++.+| .|.++++|++|+|++|++++..|..|+++++|++
T Consensus 3 ~C~~~~~--c~~~~~~l~~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 78 (549)
T 2z81_A 3 SCDASGV--CDGRSRSFTSIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEH 78 (549)
T ss_dssp EECTTSE--EECTTSCCSSCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCce--EECCCCccccccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCE
Confidence 5766555 7899999998887764 799999999999999887 8999999999999999999888899999999999
Q ss_pred EecccCccccccchhhcCCCccCeeeccCCcccC-cC--CCCCCCCCCeeeccCCcCCCCCC-CcCCCCCCcccc
Q 005880 140 LDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PI--TGLDLRNLQDFNVSGNHLSGQIP-KSLSGFPDSAFT 210 (672)
Q Consensus 140 L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~--~~~~l~~L~~l~l~~N~l~g~~p-~~l~~~~~~~~~ 210 (672)
|+|++|++++..|..|+++++|++|+|++|++++ .. .+..+++|++|++++|++.+.+| ..+..++.+...
T Consensus 79 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L 153 (549)
T 2z81_A 79 LDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNEL 153 (549)
T ss_dssp EECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred EECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCee
Confidence 9999999998877789999999999999999986 33 46789999999999999766777 578887776554
No 360
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.54 E-value=1.1e-14 Score=162.23 Aligned_cols=104 Identities=29% Similarity=0.303 Sum_probs=62.9
Q ss_pred ccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCC
Q 005880 90 LRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEAN 169 (672)
Q Consensus 90 L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 169 (672)
|+.|+|++|+|++. |.++++++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .++++++|+.|+|++|
T Consensus 443 L~~L~Ls~n~l~~l-p~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N 518 (567)
T 1dce_A 443 VRVLHLAHKDLTVL-CHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 518 (567)
T ss_dssp CSEEECTTSCCSSC-CCGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred ceEEEecCCCCCCC-cCccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCC
Confidence 56666666666653 34666666666666666666 566666666666666666666664 55 5666666666666666
Q ss_pred cccCcC---CCCCCCCCCeeeccCCcCCCCC
Q 005880 170 RFSGPI---TGLDLRNLQDFNVSGNHLSGQI 197 (672)
Q Consensus 170 ~l~~~~---~~~~l~~L~~l~l~~N~l~g~~ 197 (672)
+|++.. .+..+++|+.|+|++|+|++..
T Consensus 519 ~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 519 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred CCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 666532 2345666666666666666443
No 361
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.53 E-value=2.7e-14 Score=133.81 Aligned_cols=104 Identities=21% Similarity=0.260 Sum_probs=79.1
Q ss_pred eEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCc
Q 005880 68 SHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNN 146 (672)
Q Consensus 68 ~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 146 (672)
+.+++++|+|+..+..+. ++|++|+|++|+|++.+| .|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp SEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 568888888877666554 788888888888888777 67888888888888888885444556788888888888888
Q ss_pred cccccchhhcCCCccCeeeccCCcccC
Q 005880 147 FSGQIPLTVNHLTHLLTLKLEANRFSG 173 (672)
Q Consensus 147 l~g~~p~~~~~l~~L~~L~l~~N~l~~ 173 (672)
|++..+..|.++++|+.|+|++|++..
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred cceeCHHHhccccCCCEEEeCCCCccc
Confidence 885444457777777777777777664
No 362
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.52 E-value=3.2e-14 Score=154.82 Aligned_cols=139 Identities=19% Similarity=0.137 Sum_probs=113.4
Q ss_pred EEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCcc
Q 005880 69 HLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNF 147 (672)
Q Consensus 69 ~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l 147 (672)
.++.++++++..+..+. ++|++|+|++|+|++..| .|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 58 ~v~c~~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 58 KVVCTRRGLSEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp EEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EEEECCCCcCccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 45566667777666554 689999999999999877 899999999999999999988889999999999999999999
Q ss_pred ccccchhhcCCCccCeeeccCCcccCcC--CCCCCCCCCeeeccCCcCCCCCCC-cCCCCCCccc
Q 005880 148 SGQIPLTVNHLTHLLTLKLEANRFSGPI--TGLDLRNLQDFNVSGNHLSGQIPK-SLSGFPDSAF 209 (672)
Q Consensus 148 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~l~~L~~l~l~~N~l~g~~p~-~l~~~~~~~~ 209 (672)
++..+..|.++++|++|+|++|+|++.. .+..+++|+.|++++|+..+.+|. .|..++.+..
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~ 200 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKY 200 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCE
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCE
Confidence 9766677999999999999999998732 356788888888888544445654 4555554443
No 363
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=6.5e-17 Score=155.36 Aligned_cols=142 Identities=22% Similarity=0.321 Sum_probs=119.1
Q ss_pred cEeEEEecCCCcccCCC-------CCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCC
Q 005880 66 RVSHLVLENLQLSGSLQ-------PLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLY 138 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~-------~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~ 138 (672)
+++.++++.+.+.|..+ .+..+++|++|+|++|++++ +|.+.++++|++|+|++|+++ .+|..+..+++|+
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 45566666666666554 37788999999999999998 558999999999999999999 8999999999999
Q ss_pred eEecccCccccccchhhcCCCccCeeeccCCcccC-cC--CCCCCCCCCeeeccCCcCCCCCCCc----------CCCCC
Q 005880 139 RLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-PI--TGLDLRNLQDFNVSGNHLSGQIPKS----------LSGFP 205 (672)
Q Consensus 139 ~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~--~~~~l~~L~~l~l~~N~l~g~~p~~----------l~~~~ 205 (672)
.|+|++|+|++ +| .+.++++|+.|+|++|++++ +. ....+++|++|++++|.+++.+|.. +..++
T Consensus 97 ~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~ 174 (198)
T 1ds9_A 97 ELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLP 174 (198)
T ss_dssp EEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCS
T ss_pred EEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCC
Confidence 99999999995 66 68999999999999999997 22 3578999999999999999887763 56666
Q ss_pred Cccccc
Q 005880 206 DSAFTQ 211 (672)
Q Consensus 206 ~~~~~~ 211 (672)
.+...+
T Consensus 175 ~L~~Ld 180 (198)
T 1ds9_A 175 NLKKLD 180 (198)
T ss_dssp SCSEEC
T ss_pred CcEEEC
Confidence 666543
No 364
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.52 E-value=2.5e-14 Score=155.49 Aligned_cols=138 Identities=22% Similarity=0.185 Sum_probs=91.9
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.+++.|++++|...+.+ ++..+++|++|+|++|++++. | ++.+++|+.|+|++|++++. .++++++|+.|+|++
T Consensus 148 ~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~ls~n~l~~l-~-l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~ 221 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL-DVTPQTQLTTLDCSFNKITEL-D-VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSS 221 (457)
T ss_dssp TTCCEEECTTCSCCCCC-CCTTCTTCCEEECCSSCCCCC-C-CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCS
T ss_pred CcCCEEECCCCCccccc-ccccCCcCCEEECCCCcccee-c-cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcC
Confidence 46778888888655554 577778888888888888874 3 77777788888888887753 377777788888888
Q ss_pred CccccccchhhcCCCccCeeeccCCcccCcCCCCCCC----------CCCeeeccCCcCCCCCCC-cCCCCCCcccccc
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLR----------NLQDFNVSGNHLSGQIPK-SLSGFPDSAFTQN 212 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~----------~L~~l~l~~N~l~g~~p~-~l~~~~~~~~~~n 212 (672)
|+|++ +| ++.+++|+.|++++|+|++.. ...++ +|+.|++++|.+.|.+|. .+.++..+.+.+|
T Consensus 222 N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~-~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n 296 (457)
T 3bz5_A 222 NKLTE-ID--VTPLTQLTYFDCSVNPLTELD-VSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHN 296 (457)
T ss_dssp SCCSC-CC--CTTCTTCSEEECCSSCCSCCC-CTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTC
T ss_pred Ccccc-cC--ccccCCCCEEEeeCCcCCCcC-HHHCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCC
Confidence 88875 55 777777888888888777732 22222 445566666666666652 2234444444444
No 365
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=3.6e-14 Score=132.47 Aligned_cols=108 Identities=19% Similarity=0.191 Sum_probs=95.3
Q ss_pred CccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccC
Q 005880 89 QLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEA 168 (672)
Q Consensus 89 ~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 168 (672)
..+.|++++|+|+..+..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 10 ~~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp ETTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 35799999999998665664 8999999999999988899999999999999999999976666789999999999999
Q ss_pred CcccCcCC--CCCCCCCCeeeccCCcCCCCCC
Q 005880 169 NRFSGPIT--GLDLRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 169 N~l~~~~~--~~~l~~L~~l~l~~N~l~g~~p 198 (672)
|+|++..+ +..+++|+.|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99998443 5689999999999999986543
No 366
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.52 E-value=4.8e-14 Score=153.29 Aligned_cols=123 Identities=22% Similarity=0.220 Sum_probs=80.3
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.+++.|+|++|.+++.+ ++.+++|++|+|++|+|++. | ++++++|++|+|++|++++ +| ++++++|++|++++
T Consensus 64 ~~L~~L~Ls~n~l~~~~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~ 136 (457)
T 3bz5_A 64 TGLTKLICTSNNITTLD--LSQNTNLTYLACDSNKLTNL-D-VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCAR 136 (457)
T ss_dssp TTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCC-C-CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTT
T ss_pred CCCCEEEccCCcCCeEc--cccCCCCCEEECcCCCCcee-e-cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCC
Confidence 45666666666666642 66666666666666666664 2 6666666777777776664 44 66666677777777
Q ss_pred CccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCC
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p 198 (672)
|+|++ +| ++++++|++|++++|+..+.++...+++|+.|++++|++++ +|
T Consensus 137 N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-l~ 186 (457)
T 3bz5_A 137 NTLTE-ID--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE-LD 186 (457)
T ss_dssp SCCSC-CC--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC-CC
T ss_pred Cccce-ec--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccce-ec
Confidence 76664 33 66666677777777666555566667777777777777774 44
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.52 E-value=2.7e-14 Score=159.99 Aligned_cols=128 Identities=26% Similarity=0.338 Sum_probs=116.4
Q ss_pred cCCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 63 LQNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 63 ~~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
...+++.|+|++|.|++. +.+..+++|+.|+|++|+|++ ++.+.+|++|+.|+|++|+|++. ..++.|++|+.|+|
T Consensus 85 ~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 85 NLKNLGWLFLDENKIKDL-SSLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 160 (605)
T ss_dssp GCTTCCEEECCSSCCCCC-TTSTTCTTCCEEECTTSCCCC-CGGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEEC
T ss_pred cCCCCCEEECcCCCCCCC-hhhccCCCCCEEEecCCCCCC-CccccCCCccCEEECCCCccCCc--hhhcccCCCCEEEC
Confidence 346899999999999974 479999999999999999997 46799999999999999999964 78999999999999
Q ss_pred ccCccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCC
Q 005880 143 SFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQ 196 (672)
Q Consensus 143 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~ 196 (672)
++|+|++..| +..+++|+.|+|++|+|++...+..+++|+.|+|++|++++.
T Consensus 161 s~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 161 EDNQISDIVP--LAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCSEEEECC
T ss_pred cCCcCCCchh--hccCCCCCEEECcCCCCCCChHHccCCCCCEEEccCCcCcCC
Confidence 9999997766 999999999999999999966678899999999999999864
No 368
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.52 E-value=1.3e-14 Score=162.89 Aligned_cols=151 Identities=21% Similarity=0.214 Sum_probs=105.7
Q ss_pred CCCCCCCCCCCcccceE--------EcCCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCccccccee
Q 005880 45 LTTWNSTSDPCSWTGVS--------CLQNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLL 116 (672)
Q Consensus 45 ~~~W~~~~~~c~w~gv~--------c~~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L 116 (672)
..+|..+.+||.|+|.. |....++.|++++|+|+..+..+. ++|++|+|++|+|+..++ .+++|++|
T Consensus 12 w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~~lp~~l~--~~L~~L~L~~N~l~~lp~---~l~~L~~L 86 (622)
T 3g06_A 12 WSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLTSLPA---LPPELRTL 86 (622)
T ss_dssp HHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCSCCCSCCC--TTCSEEEECSCCCSCCCC---CCTTCCEE
T ss_pred HHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcCccChhhC--CCCcEEEecCCCCCCCCC---cCCCCCEE
Confidence 45687777899997653 334568889999999886665554 788888888888886444 56788888
Q ss_pred eccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCC
Q 005880 117 FLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQ 196 (672)
Q Consensus 117 ~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~ 196 (672)
+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+|++... .+++|++|+|++|+++ .
T Consensus 87 ~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~lp~--~l~~L~~L~Ls~N~l~-~ 155 (622)
T 3g06_A 87 EVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTSLPV--LPPGLQELSVSDNQLA-S 155 (622)
T ss_dssp EECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSCCCC--CCTTCCEEECCSSCCS-C
T ss_pred EcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCcCCC--CCCCCCEEECcCCcCC-C
Confidence 88888888 5676 66788888888888874 554 45677777777777776222 2366777777777776 3
Q ss_pred CCCcCCCCCCccccc
Q 005880 197 IPKSLSGFPDSAFTQ 211 (672)
Q Consensus 197 ~p~~l~~~~~~~~~~ 211 (672)
+|..+.++..+.+.+
T Consensus 156 l~~~~~~L~~L~L~~ 170 (622)
T 3g06_A 156 LPALPSELCKLWAYN 170 (622)
T ss_dssp CCCCCTTCCEEECCS
T ss_pred cCCccCCCCEEECCC
Confidence 555444444444333
No 369
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.50 E-value=3.4e-14 Score=148.83 Aligned_cols=142 Identities=26% Similarity=0.352 Sum_probs=115.0
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.+++.|++++|.+.+..+ +..+++|++|+|++|.+++..+ +..+++|++|+|++|.+++ + +.+..+++|+.|++++
T Consensus 199 ~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~ 274 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGS 274 (347)
T ss_dssp TTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCS
T ss_pred CccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccC
Confidence 578899999999887655 8889999999999999998766 8899999999999999985 4 4688999999999999
Q ss_pred CccccccchhhcCCCccCeeeccCCcccCcC--CCCCCCCCCeeeccCCcCCCCCC-CcCCCCCCcccccc
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSGPI--TGLDLRNLQDFNVSGNHLSGQIP-KSLSGFPDSAFTQN 212 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~l~~L~~l~l~~N~l~g~~p-~~l~~~~~~~~~~n 212 (672)
|++++ + ..+..+++|+.|++++|++++.. .+..+++|+.|++++|++++..| ..+.++..+.+.+|
T Consensus 275 n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N 343 (347)
T 4fmz_A 275 NQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQ 343 (347)
T ss_dssp SCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC
T ss_pred CccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhh
Confidence 99985 4 45888999999999999998733 24678999999999999997666 23334444444444
No 370
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.50 E-value=3.5e-14 Score=155.12 Aligned_cols=129 Identities=29% Similarity=0.330 Sum_probs=117.1
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.+++.|+|++|.+++.++ +..+++|+.|+|++|++++.++ ++++++|+.|+|++|++++..| +..+++|+.|++++
T Consensus 265 ~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~ 340 (466)
T 1o6v_A 265 TKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYN 340 (466)
T ss_dssp TTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCS
T ss_pred CCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCC
Confidence 579999999999998765 8999999999999999998665 8899999999999999997665 88999999999999
Q ss_pred CccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCc
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKS 200 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~ 200 (672)
|++++. ..+.++++|+.|++++|++++..+...+++|+.|++++|.+++ +|..
T Consensus 341 n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~-~p~~ 393 (466)
T 1o6v_A 341 NKVSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTN-APVN 393 (466)
T ss_dssp SCCCCC--GGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEEC-CCBC
T ss_pred CccCCc--hhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcccC-Cchh
Confidence 999965 4789999999999999999997778899999999999999995 4543
No 371
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.49 E-value=1.8e-14 Score=135.44 Aligned_cols=124 Identities=18% Similarity=0.099 Sum_probs=104.9
Q ss_pred CCCCCCCccEEEcccCCCCCCCCCCCccc-ccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCcc
Q 005880 83 PLTSLTQLRVLSLKYNRFTGPVPSLSNLT-ALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHL 161 (672)
Q Consensus 83 ~l~~l~~L~~L~L~~N~l~~~~p~~~~l~-~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L 161 (672)
.+.++.+|+.|+|++|+++.. |.+..+. +|++|+|++|+|++. ..|+++++|++|+|++|+|++..|..+..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 366788999999999999965 7777776 999999999999964 689999999999999999996544556999999
Q ss_pred CeeeccCCcccC-cC--CCCCCCCCCeeeccCCcCCCCCCCc----CCCCCCcccc
Q 005880 162 LTLKLEANRFSG-PI--TGLDLRNLQDFNVSGNHLSGQIPKS----LSGFPDSAFT 210 (672)
Q Consensus 162 ~~L~l~~N~l~~-~~--~~~~l~~L~~l~l~~N~l~g~~p~~----l~~~~~~~~~ 210 (672)
++|+|++|+|+. +. ....+++|+.|++++|.++ .+|.. +..++.+...
T Consensus 91 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~L 145 (176)
T 1a9n_A 91 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVL 145 (176)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEE
T ss_pred CEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcccee
Confidence 999999999977 32 4568999999999999998 67764 6667766554
No 372
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.49 E-value=5.4e-14 Score=147.58 Aligned_cols=144 Identities=19% Similarity=0.175 Sum_probs=103.0
Q ss_pred CcccceEEcC-----------CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC--CCCcccccce-eecc
Q 005880 55 CSWTGVSCLQ-----------NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP--SLSNLTALKL-LFLS 119 (672)
Q Consensus 55 c~w~gv~c~~-----------~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~-L~l~ 119 (672)
|+|+.|.|.. ..+++|+|++|+|+.+++. |.+|++|++|+|++|++.+.+| .|.++++|+. +.++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 7899999964 3688999999999988875 8999999999999999988666 5778888764 5667
Q ss_pred ccccCCCCChhhhccCCCCeEecccCccccccchhhc-------------------------CC-CccCeeeccCCcccC
Q 005880 120 HNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVN-------------------------HL-THLLTLKLEANRFSG 173 (672)
Q Consensus 120 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-------------------------~l-~~L~~L~l~~N~l~~ 173 (672)
+|+|++..|..|.++++|++|++++|+|++..+..+. .+ ..|+.|+|++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 7888866677788888888888888888744332221 12 245667777777765
Q ss_pred -cCCCCCCCCCCeeeccCCcCCCCCC
Q 005880 174 -PITGLDLRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 174 -~~~~~~l~~L~~l~l~~N~l~g~~p 198 (672)
+...+...+|+.|++++|+..+.+|
T Consensus 169 i~~~~f~~~~L~~l~l~~~n~l~~i~ 194 (350)
T 4ay9_X 169 IHNSAFNGTQLDELNLSDNNNLEELP 194 (350)
T ss_dssp ECTTSSTTEEEEEEECTTCTTCCCCC
T ss_pred CChhhccccchhHHhhccCCcccCCC
Confidence 2233344456666665432222555
No 373
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.49 E-value=8.5e-14 Score=154.32 Aligned_cols=118 Identities=22% Similarity=0.226 Sum_probs=81.7
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.+++.|+|++|.|+.++ ..+++|++|+|++|+|++.++ +.+ +|++|+|++|+|++ +|. .+++|+.|+|++
T Consensus 80 ~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 149 (571)
T 3cvr_A 80 PQITVLEITQNALISLP---ELPASLEYLDACDNRLSTLPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADN 149 (571)
T ss_dssp TTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred CCCCEEECcCCCCcccc---cccCCCCEEEccCCCCCCcch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCC
Confidence 46788888888887544 456778888888888877443 554 77777777777775 666 567777777777
Q ss_pred CccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCC
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPK 199 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~ 199 (672)
|+|++ +|. .+++|+.|+|++|+|++... .. ++|+.|+|++|+|+ .+|.
T Consensus 150 N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~-l~-~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 150 NQLTM-LPE---LPTSLEVLSVRNNQLTFLPE-LP-ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSCCCC-CC-TTCCEEECCSSCCS-SCCC
T ss_pred CccCc-CCC---cCCCcCEEECCCCCCCCcch-hh-CCCCEEECcCCCCC-chhh
Confidence 77774 655 46677777777777776222 22 67777777777777 6665
No 374
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=1.1e-13 Score=129.66 Aligned_cols=104 Identities=18% Similarity=0.205 Sum_probs=92.3
Q ss_pred ccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCC
Q 005880 90 LRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEAN 169 (672)
Q Consensus 90 L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 169 (672)
-+.+++++|+++..++.+. ++|++|+|++|+|++..|..|+++++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 14 ~~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SSEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CcEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3789999999987666665 89999999999999888999999999999999999999755556799999999999999
Q ss_pred cccCcCC--CCCCCCCCeeeccCCcCCC
Q 005880 170 RFSGPIT--GLDLRNLQDFNVSGNHLSG 195 (672)
Q Consensus 170 ~l~~~~~--~~~l~~L~~l~l~~N~l~g 195 (672)
+|++..+ +..+++|+.|+|++|.|..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 9998443 5689999999999999984
No 375
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.47 E-value=6.6e-14 Score=146.65 Aligned_cols=136 Identities=24% Similarity=0.366 Sum_probs=70.2
Q ss_pred cEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC---------------------CCCcccccceeeccccccC
Q 005880 66 RVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP---------------------SLSNLTALKLLFLSHNNFN 124 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p---------------------~~~~l~~L~~L~l~~N~l~ 124 (672)
+++.|++++|.+.+..+ +..+++|+.|+|++|.+++..+ .+..+++|+.|+|++|+++
T Consensus 156 ~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~ 234 (347)
T 4fmz_A 156 GLNYLTVTESKVKDVTP-IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKIT 234 (347)
T ss_dssp TCCEEECCSSCCCCCGG-GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCcEEEecCCCcCCchh-hccCCCCCEEEccCCcccccccccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCccC
Confidence 45555555555544332 4455555555555555554332 1445555555555555555
Q ss_pred CCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCC
Q 005880 125 GEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGF 204 (672)
Q Consensus 125 g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~ 204 (672)
+ +|. +..+++|++|++++|++++ + ..+..+++|++|++++|++++......+++|+.|++++|++++..|..+..+
T Consensus 235 ~-~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 310 (347)
T 4fmz_A 235 D-LSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDMEVIGGL 310 (347)
T ss_dssp C-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCGGGHHHHHTC
T ss_pred C-Ccc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCCcChhHhhcc
Confidence 2 332 5555555555555555553 2 2455555555555555555553334455556666666666655555444443
Q ss_pred CC
Q 005880 205 PD 206 (672)
Q Consensus 205 ~~ 206 (672)
+.
T Consensus 311 ~~ 312 (347)
T 4fmz_A 311 TN 312 (347)
T ss_dssp TT
T ss_pred cc
Confidence 33
No 376
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.46 E-value=1e-13 Score=145.20 Aligned_cols=107 Identities=25% Similarity=0.264 Sum_probs=88.3
Q ss_pred CcccceEEcCCcEeEEEecCC-CcccCCCCCCCCCCccEEEccc-CCCCCCCC-CCCcccccceeeccccccCCCCChhh
Q 005880 55 CSWTGVSCLQNRVSHLVLENL-QLSGSLQPLTSLTQLRVLSLKY-NRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSV 131 (672)
Q Consensus 55 c~w~gv~c~~~~v~~L~l~~~-~l~~~~~~l~~l~~L~~L~L~~-N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~ 131 (672)
|.|.+|.|. ++ +|++++. |..+++|+.|+|++ |+|++.++ .|++|++|+.|+|++|+|++..|..|
T Consensus 8 C~~~~v~~~----------~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 76 (347)
T 2ifg_A 8 HGSSGLRCT----------RDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAF 76 (347)
T ss_dssp SSSSCEECC----------SSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGG
T ss_pred ccCCEEEcC----------CCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHh
Confidence 777766664 44 7877777 89999999999996 99998887 78999999999999999998888889
Q ss_pred hccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccC
Q 005880 132 SSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG 173 (672)
Q Consensus 132 ~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 173 (672)
.+|++|+.|+|++|+|++..+..+..++ |+.|+|++|+|..
T Consensus 77 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 77 HFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp GSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred cCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 9999999999999999965555555555 8888888888775
No 377
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.45 E-value=5.2e-13 Score=145.01 Aligned_cols=131 Identities=21% Similarity=0.301 Sum_probs=93.9
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.+++.|++++|.+++... + .++|++|+|++|++++ +|.++++++|++|++++|++++ +|..+ .+|++|++++
T Consensus 111 ~~L~~L~l~~n~l~~l~~-~--~~~L~~L~L~~n~l~~-lp~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~ 182 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKALSD-L--PPLLEYLGVSNNQLEK-LPELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGN 182 (454)
T ss_dssp TTCCEEECCSSCCSCCCS-C--CTTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCS
T ss_pred CCCcEEECCCCccCcccC-C--CCCCCEEECcCCCCCC-CcccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcC
Confidence 456667777666665332 1 1678888888888887 5578888888888888888884 66544 4788888888
Q ss_pred CccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCccc
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAF 209 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~ 209 (672)
|++++ +| .++++++|+.|++++|++++.... ..+|+.|++++|+++ .+|. +..++.+..
T Consensus 183 n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~--~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~ 241 (454)
T 1jl5_A 183 NQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDL--PLSLESIVAGNNILE-ELPE-LQNLPFLTT 241 (454)
T ss_dssp SCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCC--CTTCCEEECCSSCCS-SCCC-CTTCTTCCE
T ss_pred CcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCC--cCcccEEECcCCcCC-cccc-cCCCCCCCE
Confidence 88885 66 588888888888888888872221 247788888888877 6773 555554443
No 378
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.44 E-value=1.9e-13 Score=152.18 Aligned_cols=124 Identities=19% Similarity=0.297 Sum_probs=87.1
Q ss_pred CCCCCCccEEE-cccCCCCCCCC------CCCc--ccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchh
Q 005880 84 LTSLTQLRVLS-LKYNRFTGPVP------SLSN--LTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLT 154 (672)
Q Consensus 84 l~~l~~L~~L~-L~~N~l~~~~p------~~~~--l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 154 (672)
++.|++|+.|+ ++.|.+..... .+.. ...|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..
T Consensus 405 l~~l~~L~~L~~l~~n~~~~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~ 481 (567)
T 1dce_A 405 LQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPA 481 (567)
T ss_dssp HHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGG
T ss_pred HHHHHhcccCcchhhcccchhhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchh
Confidence 45567777777 55554332110 0111 1247788888888884 676 888888888888888888 78888
Q ss_pred hcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCC-CCcCCCCCCcccc
Q 005880 155 VNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQI-PKSLSGFPDSAFT 210 (672)
Q Consensus 155 ~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~-p~~l~~~~~~~~~ 210 (672)
|+++++|+.|+|++|+|++...+..+++|+.|+|++|+|++.. |..+..++.|..+
T Consensus 482 ~~~l~~L~~L~Ls~N~l~~lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 482 LAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp GGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred hhcCCCCCEEECCCCCCCCCcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 8888888888888888888335667888888888888888766 7777666655443
No 379
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.43 E-value=6.1e-13 Score=144.43 Aligned_cols=136 Identities=18% Similarity=0.154 Sum_probs=98.9
Q ss_pred CCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 64 QNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
..+++.|+|++|.+++.+. .+++|++|+|++|++++... + .++|++|+|++|++++ +| .|+++++|++|+++
T Consensus 90 ~~~L~~L~l~~n~l~~lp~---~~~~L~~L~l~~n~l~~l~~-~--~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~ 161 (454)
T 1jl5_A 90 PPHLESLVASCNSLTELPE---LPQSLKSLLVDNNNLKALSD-L--PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVD 161 (454)
T ss_dssp CTTCSEEECCSSCCSSCCC---CCTTCCEEECCSSCCSCCCS-C--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred cCCCCEEEccCCcCCcccc---ccCCCcEEECCCCccCcccC-C--CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECC
Confidence 3567777888777777443 23678888888888776332 2 1678888888888884 77 58888888888888
Q ss_pred cCccccccchhhcCCCccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcccccc
Q 005880 144 FNNFSGQIPLTVNHLTHLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFTQN 212 (672)
Q Consensus 144 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~~n 212 (672)
+|++++ +|..+ .+|++|++++|++++...+..+++|+.|++++|++++ +|....++..+.+.+|
T Consensus 162 ~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~n 225 (454)
T 1jl5_A 162 NNSLKK-LPDLP---PSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKK-LPDLPLSLESIVAGNN 225 (454)
T ss_dssp SSCCSC-CCCCC---TTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-CCCCCTTCCEEECCSS
T ss_pred CCcCcc-cCCCc---ccccEEECcCCcCCcCccccCCCCCCEEECCCCcCCc-CCCCcCcccEEECcCC
Confidence 888884 66543 4788888888888884456778888888888888884 6666666666666655
No 380
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.42 E-value=2.8e-15 Score=156.36 Aligned_cols=126 Identities=18% Similarity=0.171 Sum_probs=71.4
Q ss_pred cEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCC-CC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 66 RVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGP-VP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~-~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
+++.|++++|.+.+.++.+..+++|++|+|++|.+++. +| .+.++++|++|+|++|++++..|..++++++|++|+|+
T Consensus 71 ~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~ 150 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLS 150 (336)
T ss_dssp TCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECT
T ss_pred cceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECC
Confidence 45555555555555555555566666666666665543 33 45556666666666666665555566666666666666
Q ss_pred cC-ccccc-cchhhcCCCccCeeeccCC-cccCc-C--CCCCCC-CCCeeeccCC
Q 005880 144 FN-NFSGQ-IPLTVNHLTHLLTLKLEAN-RFSGP-I--TGLDLR-NLQDFNVSGN 191 (672)
Q Consensus 144 ~N-~l~g~-~p~~~~~l~~L~~L~l~~N-~l~~~-~--~~~~l~-~L~~l~l~~N 191 (672)
+| .+++. +|..+.++++|++|+|++| ++++. + ....++ +|++|++++|
T Consensus 151 ~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 151 GCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp TCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred CCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 66 45542 4555556666666666666 55541 1 123455 6666666666
No 381
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.39 E-value=1.9e-12 Score=145.19 Aligned_cols=51 Identities=27% Similarity=0.370 Sum_probs=22.9
Q ss_pred CccCeeeccCCcccCcCCCCCCCCCCeeeccCCcCCCCCCCcCCCCCCcccccc
Q 005880 159 THLLTLKLEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFTQN 212 (672)
Q Consensus 159 ~~L~~L~l~~N~l~~~~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~~~~~n 212 (672)
++|+.|+|++|+|++.. ..+++|+.|+|++|+|+ .+|..+.++..+.+.+|
T Consensus 221 ~~L~~L~Ls~N~L~~lp--~~l~~L~~L~Ls~N~L~-~lp~~~~~L~~L~Ls~N 271 (622)
T 3g06_A 221 SGLKELIVSGNRLTSLP--VLPSELKELMVSGNRLT-SLPMLPSGLLSLSVYRN 271 (622)
T ss_dssp TTCCEEECCSSCCSCCC--CCCTTCCEEECCSSCCS-CCCCCCTTCCEEECCSS
T ss_pred CCCCEEEccCCccCcCC--CCCCcCcEEECCCCCCC-cCCcccccCcEEeCCCC
Confidence 44555555555555411 23344555555555554 34443333444433333
No 382
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.38 E-value=2e-14 Score=149.91 Aligned_cols=157 Identities=15% Similarity=0.128 Sum_probs=114.0
Q ss_pred CCcccceEEcCCcEeEEEecCCCcccCCCCCCCC--CCccEEEcccCCCCCCCCCCCcccccceeeccccccCCC-CChh
Q 005880 54 PCSWTGVSCLQNRVSHLVLENLQLSGSLQPLTSL--TQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGE-FPDS 130 (672)
Q Consensus 54 ~c~w~gv~c~~~~v~~L~l~~~~l~~~~~~l~~l--~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~-~p~~ 130 (672)
|..|.++.|....++.|+++++.+.. ..+..+ ++|+.|++++|.+++.++.+.++++|++|+|++|.+++. +|..
T Consensus 36 c~~W~~~~~~~~~~~~l~l~~~~~~~--~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~ 113 (336)
T 2ast_B 36 CKRWYRLASDESLWQTLDLTGKNLHP--DVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGI 113 (336)
T ss_dssp CHHHHHHHTCSTTSSEEECTTCBCCH--HHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHH
T ss_pred HHHHHHHhcCchhheeeccccccCCH--HHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHH
Confidence 44688887776667888888887662 224455 678888888888888877777888888888888888765 7777
Q ss_pred hhccCCCCeEecccCccccccchhhcCCCccCeeeccCC-cccC-cCC--CCCCCCCCeeeccCC-cCCCC-CCCcCC--
Q 005880 131 VSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEAN-RFSG-PIT--GLDLRNLQDFNVSGN-HLSGQ-IPKSLS-- 202 (672)
Q Consensus 131 ~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N-~l~~-~~~--~~~l~~L~~l~l~~N-~l~g~-~p~~l~-- 202 (672)
+.++++|++|+|++|++++..|..++++++|++|+|++| .+++ .++ ...+++|++|++++| .+++. +|..+.
T Consensus 114 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l 193 (336)
T 2ast_B 114 LSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHV 193 (336)
T ss_dssp HTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHS
T ss_pred HhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhc
Confidence 888888888888888888778888888888888888888 5664 122 346778888888888 77753 454333
Q ss_pred --CCCCcccccc
Q 005880 203 --GFPDSAFTQN 212 (672)
Q Consensus 203 --~~~~~~~~~n 212 (672)
++..+.+.+|
T Consensus 194 ~~~L~~L~l~~~ 205 (336)
T 2ast_B 194 SETITQLNLSGY 205 (336)
T ss_dssp CTTCCEEECCSC
T ss_pred ccCCCEEEeCCC
Confidence 3444444444
No 383
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=1.3e-12 Score=136.93 Aligned_cols=105 Identities=17% Similarity=0.145 Sum_probs=92.3
Q ss_pred cEEEcccC-CCCCCCCCCCcccccceeeccc-cccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccC
Q 005880 91 RVLSLKYN-RFTGPVPSLSNLTALKLLFLSH-NNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEA 168 (672)
Q Consensus 91 ~~L~L~~N-~l~~~~p~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 168 (672)
..+++++| +|+++++ |..+++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 11 ~~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 11 SGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp SCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CEEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 45799998 9998776 99999999999996 999987778999999999999999999998899999999999999999
Q ss_pred CcccCcC-CCCCCCCCCeeeccCCcCCCC
Q 005880 169 NRFSGPI-TGLDLRNLQDFNVSGNHLSGQ 196 (672)
Q Consensus 169 N~l~~~~-~~~~l~~L~~l~l~~N~l~g~ 196 (672)
|+|++.. ..+...+|+.|+|++|.|...
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCC
Confidence 9999833 334444499999999999843
No 384
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.32 E-value=2e-14 Score=137.89 Aligned_cols=126 Identities=22% Similarity=0.231 Sum_probs=108.1
Q ss_pred CCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 64 QNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
..+++.|+|++|.+++.+ .+..+++|++|+|++|.++..++.+..+++|++|+|++|++++ +| .++++++|+.|+|+
T Consensus 47 l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~ 123 (198)
T 1ds9_A 47 LKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMS 123 (198)
T ss_dssp TTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEES
T ss_pred CCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECC
Confidence 468999999999999855 8889999999999999999655467778999999999999995 66 69999999999999
Q ss_pred cCccccccc-hhhcCCCccCeeeccCCcccCcCC------------CCCCCCCCeeeccCCcCC
Q 005880 144 FNNFSGQIP-LTVNHLTHLLTLKLEANRFSGPIT------------GLDLRNLQDFNVSGNHLS 194 (672)
Q Consensus 144 ~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~------------~~~l~~L~~l~l~~N~l~ 194 (672)
+|+|++..+ ..+..+++|++|++++|++++..+ ...+++|+.|| +|.++
T Consensus 124 ~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 124 NNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 999994332 478999999999999999988432 35788999887 77766
No 385
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.29 E-value=2.9e-13 Score=142.71 Aligned_cols=134 Identities=21% Similarity=0.241 Sum_probs=92.8
Q ss_pred CcEeEEEecCCCcccCCC-----CCCCCC-CccEEEcccCCCCCCCC-CCCcc-----cccceeeccccccCCCCChhhh
Q 005880 65 NRVSHLVLENLQLSGSLQ-----PLTSLT-QLRVLSLKYNRFTGPVP-SLSNL-----TALKLLFLSHNNFNGEFPDSVS 132 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~-----~l~~l~-~L~~L~L~~N~l~~~~p-~~~~l-----~~L~~L~l~~N~l~g~~p~~~~ 132 (672)
.+++.|+|++|.+++... .+..++ +|++|+|++|+|++..+ .+..+ ++|++|+|++|++++..+..++
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 457888888888877664 266677 78888888888877655 45554 7888888888888876666555
Q ss_pred cc-----CCCCeEecccCccccccchhhcC-----CCccCeeeccCCcccCcCC------CCCCC-CCCeeeccCCcCCC
Q 005880 133 SL-----FRLYRLDLSFNNFSGQIPLTVNH-----LTHLLTLKLEANRFSGPIT------GLDLR-NLQDFNVSGNHLSG 195 (672)
Q Consensus 133 ~l-----~~L~~L~l~~N~l~g~~p~~~~~-----l~~L~~L~l~~N~l~~~~~------~~~l~-~L~~l~l~~N~l~g 195 (672)
.. ++|++|+|++|+|++..+..+.. .++|++|+|++|+|++... ...++ +|++|+|++|++++
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 43 77888888888887665554433 3578888888888774211 12333 78888888888876
Q ss_pred CCC
Q 005880 196 QIP 198 (672)
Q Consensus 196 ~~p 198 (672)
..+
T Consensus 182 ~~~ 184 (362)
T 3goz_A 182 KNC 184 (362)
T ss_dssp SCH
T ss_pred hhH
Confidence 554
No 386
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.26 E-value=3.1e-13 Score=143.79 Aligned_cols=150 Identities=20% Similarity=0.254 Sum_probs=120.3
Q ss_pred CCcEeEEEecCCCcccCCC----C-CCCC---------CCccEEEcccCCCC-CCCC----CCCcccccceeeccccccC
Q 005880 64 QNRVSHLVLENLQLSGSLQ----P-LTSL---------TQLRVLSLKYNRFT-GPVP----SLSNLTALKLLFLSHNNFN 124 (672)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~~----~-l~~l---------~~L~~L~L~~N~l~-~~~p----~~~~l~~L~~L~l~~N~l~ 124 (672)
..+++.|+|++|.++.... . +..+ ++|++|+|++|+++ +.++ .+.++++|++|+|++|+++
T Consensus 121 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 121 HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIR 200 (386)
T ss_dssp CTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred CCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 4789999999999974322 1 5555 89999999999998 4444 4668899999999999998
Q ss_pred --C---CCChhhhccCCCCeEecccCccc----cccchhhcCCCccCeeeccCCcccCc----CC--C--CCCCCCCeee
Q 005880 125 --G---EFPDSVSSLFRLYRLDLSFNNFS----GQIPLTVNHLTHLLTLKLEANRFSGP----IT--G--LDLRNLQDFN 187 (672)
Q Consensus 125 --g---~~p~~~~~l~~L~~L~l~~N~l~----g~~p~~~~~l~~L~~L~l~~N~l~~~----~~--~--~~l~~L~~l~ 187 (672)
| .+|..+.++++|+.|+|++|+|+ +.+|..+..+++|+.|+|++|+|++. ++ . ..+++|+.|+
T Consensus 201 ~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~ 280 (386)
T 2ca6_A 201 PEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLR 280 (386)
T ss_dssp HHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEE
T ss_pred HhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEE
Confidence 3 35558899999999999999996 67899999999999999999999873 22 1 4589999999
Q ss_pred ccCCcCCC----CCCCcC----CCCCCccccccc
Q 005880 188 VSGNHLSG----QIPKSL----SGFPDSAFTQNA 213 (672)
Q Consensus 188 l~~N~l~g----~~p~~l----~~~~~~~~~~n~ 213 (672)
|++|.+++ .+|..+ .++..+.+.+|+
T Consensus 281 L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~ 314 (386)
T 2ca6_A 281 LQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNR 314 (386)
T ss_dssp CCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred CcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCc
Confidence 99999997 488665 444455555554
No 387
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.25 E-value=3.7e-13 Score=143.23 Aligned_cols=122 Identities=21% Similarity=0.278 Sum_probs=58.4
Q ss_pred CCCCCccEEEcccCCCCC----CCC-CCCcccccceeeccccccCCCCChhhh----cc---------CCCCeEecccCc
Q 005880 85 TSLTQLRVLSLKYNRFTG----PVP-SLSNLTALKLLFLSHNNFNGEFPDSVS----SL---------FRLYRLDLSFNN 146 (672)
Q Consensus 85 ~~l~~L~~L~L~~N~l~~----~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~----~l---------~~L~~L~l~~N~ 146 (672)
..+++|++|+|++|.+++ .+| .+.++++|++|+|++|.+++..+..+. .+ ++|++|+|++|+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 445555555555555554 122 344555555555555555432222222 22 555555555555
Q ss_pred cc-cccc---hhhcCCCccCeeeccCCccc--C-----cCCCCCCCCCCeeeccCCcCC----CCCCCcCCCCCC
Q 005880 147 FS-GQIP---LTVNHLTHLLTLKLEANRFS--G-----PITGLDLRNLQDFNVSGNHLS----GQIPKSLSGFPD 206 (672)
Q Consensus 147 l~-g~~p---~~~~~l~~L~~L~l~~N~l~--~-----~~~~~~l~~L~~l~l~~N~l~----g~~p~~l~~~~~ 206 (672)
|+ +.+| ..+..+++|++|+|++|+|+ | +.....+++|+.|+|++|.++ +.+|..+..++.
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~ 245 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 245 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTT
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCC
Confidence 54 3333 24445555555555555554 1 112334555555555555553 344444443333
No 388
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.24 E-value=1.3e-11 Score=129.33 Aligned_cols=125 Identities=13% Similarity=0.078 Sum_probs=100.6
Q ss_pred EEcCCcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCCh-hhhccCCCC
Q 005880 61 SCLQNRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPD-SVSSLFRLY 138 (672)
Q Consensus 61 ~c~~~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~ 138 (672)
.|.. +.++.++++|+.+|..+ .++|++|+|++|+|+.+++ .|.+|++|++|+|++|++.+.+|. .|.++++|.
T Consensus 8 ~C~~---~~v~C~~~~Lt~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~ 82 (350)
T 4ay9_X 8 HCSN---RVFLCQESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLH 82 (350)
T ss_dssp EEET---TEEEEESTTCCSCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCC
T ss_pred EeeC---CEEEecCCCCCccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhh
Confidence 5654 35789999999887766 3689999999999998777 699999999999999999877775 578898877
Q ss_pred e-EecccCccccccchhhcCCCccCeeeccCCcccCcCC--CCCCCCCCeeeccC
Q 005880 139 R-LDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSGPIT--GLDLRNLQDFNVSG 190 (672)
Q Consensus 139 ~-L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~l~~L~~l~l~~ 190 (672)
+ +++++|+|++..|..|.++++|++|++++|+|++..+ .....++..|++++
T Consensus 83 ~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~ 137 (350)
T 4ay9_X 83 EIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQD 137 (350)
T ss_dssp EEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEES
T ss_pred hhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcc
Confidence 5 6778899997778899999999999999999987333 23333444555543
No 389
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.22 E-value=1.7e-11 Score=122.84 Aligned_cols=136 Identities=14% Similarity=0.067 Sum_probs=105.3
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEEEEeecCCCChh
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 444 (672)
..++.|+.+.||++... |..+++|+...........+.+|+++++.+. |..+.++++++.+.+..|+||||++|.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 45677788999999855 6889999987532223456889999998884 677888999998888999999999999998
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC-------------------------------------------
Q 005880 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC------------------------------------------- 481 (672)
Q Consensus 445 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------------- 481 (672)
+.+.. ......++.+++++|+.||...
T Consensus 99 ~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 99 EEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 76421 1123478899999999999610
Q ss_pred ------------CCCCcEecCCCCCCEEeCCCCcEEEeccCCC
Q 005880 482 ------------KSLKLTHGNIKSTNVLLDKTGNARVSDFGLS 512 (672)
Q Consensus 482 ------------~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a 512 (672)
....++|+|++|.||+++++..+.|+||+.+
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence 0145899999999999987656679999865
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.22 E-value=1.7e-12 Score=136.71 Aligned_cols=130 Identities=19% Similarity=0.161 Sum_probs=107.7
Q ss_pred EEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-----CCCccc-ccceeeccccccCCCCChhhhcc-----CC
Q 005880 69 HLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-----SLSNLT-ALKLLFLSHNNFNGEFPDSVSSL-----FR 136 (672)
Q Consensus 69 ~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-----~~~~l~-~L~~L~l~~N~l~g~~p~~~~~l-----~~ 136 (672)
.++|+.|+++|.++. +...++|++|+|++|.|++..+ .+.+++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 468899999998877 4555669999999999998764 466788 89999999999998888888886 99
Q ss_pred CCeEecccCccccccchhhcC----C-CccCeeeccCCcccCcCC------CCC-CCCCCeeeccCCcCCCCCC
Q 005880 137 LYRLDLSFNNFSGQIPLTVNH----L-THLLTLKLEANRFSGPIT------GLD-LRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 137 L~~L~l~~N~l~g~~p~~~~~----l-~~L~~L~l~~N~l~~~~~------~~~-l~~L~~l~l~~N~l~g~~p 198 (672)
|++|+|++|+|++..+..+.. + ++|++|+|++|+|++... ... .++|++|+|++|++++..+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 155 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSS 155 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHH
Confidence 999999999999877775554 4 899999999999987332 123 3699999999999995443
No 391
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.14 E-value=1.3e-12 Score=142.39 Aligned_cols=143 Identities=18% Similarity=0.136 Sum_probs=98.9
Q ss_pred CCcEeEEEecCCCcccCC-----CC-CCCCCCccEEEcccCCCCCC----CC-CCCcccccceeeccccccCCCCChhhh
Q 005880 64 QNRVSHLVLENLQLSGSL-----QP-LTSLTQLRVLSLKYNRFTGP----VP-SLSNLTALKLLFLSHNNFNGEFPDSVS 132 (672)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~-----~~-l~~l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~ 132 (672)
..++++|+|++|.++... +. +..+++|++|+|++|.++.. ++ .+.++++|++|+|++|.+++..+..+.
T Consensus 226 ~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 305 (461)
T 1z7x_W 226 KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLC 305 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHH
T ss_pred CCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHH
Confidence 367888899888876532 11 44678888888888888863 23 566778888888888888755555554
Q ss_pred cc-----CCCCeEecccCccccc----cchhhcCCCccCeeeccCCcccCcC--CCC-----CCCCCCeeeccCCcCCC-
Q 005880 133 SL-----FRLYRLDLSFNNFSGQ----IPLTVNHLTHLLTLKLEANRFSGPI--TGL-----DLRNLQDFNVSGNHLSG- 195 (672)
Q Consensus 133 ~l-----~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~--~~~-----~l~~L~~l~l~~N~l~g- 195 (672)
.. ++|+.|+|++|.+++. +|..+..+++|++|+|++|++++.. ... ..++|+.|++++|.+++
T Consensus 306 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~ 385 (461)
T 1z7x_W 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDS 385 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHH
T ss_pred HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChh
Confidence 43 5788888888888765 5666777788888888888876521 111 25678888888888875
Q ss_pred ---CCCCcCCCCCC
Q 005880 196 ---QIPKSLSGFPD 206 (672)
Q Consensus 196 ---~~p~~l~~~~~ 206 (672)
.+|..+..++.
T Consensus 386 ~~~~l~~~l~~~~~ 399 (461)
T 1z7x_W 386 SCSSLAATLLANHS 399 (461)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHhCCC
Confidence 66655443333
No 392
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.14 E-value=8.4e-11 Score=117.43 Aligned_cols=131 Identities=15% Similarity=0.111 Sum_probs=97.5
Q ss_pred ccC-cCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCc--eeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 367 MLG-KGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPN--LVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 367 ~lg-~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.++ .|..+.||++...+|..+++|..... ....+.+|+++++.+.+.+ +.+++++....+..++||||++|.+|
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 344 55569999998877888999997653 2346788898888885444 45688888888889999999999888
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC------------------------------------------
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC------------------------------------------ 481 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------------ 481 (672)
. ... .+ ...++.++++.|+.||...
T Consensus 103 ~--~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
T 1nd4_A 103 L--SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAE 169 (264)
T ss_dssp T--TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHH
T ss_pred C--cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHH
Confidence 4 211 11 2367788888888888421
Q ss_pred ------------CCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 482 ------------KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 482 ------------~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
....++|||++|.||+++++..+.|+|||.+.
T Consensus 170 ~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 170 LFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 01129999999999999877667799999763
No 393
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.09 E-value=8.1e-13 Score=131.22 Aligned_cols=155 Identities=17% Similarity=0.195 Sum_probs=109.4
Q ss_pred CCcccceEEcCC--cEeEEEecC---CCcccCCCC--CCCCCCccEEEcccCCCCCCCC--CCCcccccce--eeccccc
Q 005880 54 PCSWTGVSCLQN--RVSHLVLEN---LQLSGSLQP--LTSLTQLRVLSLKYNRFTGPVP--SLSNLTALKL--LFLSHNN 122 (672)
Q Consensus 54 ~c~w~gv~c~~~--~v~~L~l~~---~~l~~~~~~--l~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~--L~l~~N~ 122 (672)
.|.|.|+.|..+ +|+.+...+ ..+.+.+.+ +..++. .|...+|..++.+. .+...+.|.. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 478999999764 777666554 233333321 222222 44556666666555 4777778877 8889885
Q ss_pred cCCCCChh----hhccCCCCeEecccCcccc--ccchhhcCCCccCeeeccCCcccCcCCCCCCC--CCCeeeccCCcCC
Q 005880 123 FNGEFPDS----VSSLFRLYRLDLSFNNFSG--QIPLTVNHLTHLLTLKLEANRFSGPITGLDLR--NLQDFNVSGNHLS 194 (672)
Q Consensus 123 l~g~~p~~----~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~l~--~L~~l~l~~N~l~ 194 (672)
.. .++.. ..++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++......+. +|++|+|++|.++
T Consensus 155 ~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 155 RS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp HH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTG
T ss_pred HH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcCc
Confidence 44 34432 3578899999999999997 56778889999999999999999853333333 8999999999999
Q ss_pred CCCCC-------cCCCCCCccccc
Q 005880 195 GQIPK-------SLSGFPDSAFTQ 211 (672)
Q Consensus 195 g~~p~-------~l~~~~~~~~~~ 211 (672)
+.+|. .+..+|.|..++
T Consensus 234 ~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 234 DTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGCSSHHHHHHHHHHHCTTCCEES
T ss_pred cccCcchhHHHHHHHHCcccCeEC
Confidence 88874 256677776654
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.05 E-value=3.1e-12 Score=139.37 Aligned_cols=148 Identities=18% Similarity=0.171 Sum_probs=115.0
Q ss_pred CcEeEEEecCCCcccC-----CCCCCCCCCccEEEcccCCCCCCC-----C-CCCcccccceeeccccccCCC----CCh
Q 005880 65 NRVSHLVLENLQLSGS-----LQPLTSLTQLRVLSLKYNRFTGPV-----P-SLSNLTALKLLFLSHNNFNGE----FPD 129 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~-----~~~l~~l~~L~~L~L~~N~l~~~~-----p-~~~~l~~L~~L~l~~N~l~g~----~p~ 129 (672)
.+++.|+|++|.+++. ...+..+++|++|+|++|.++... + .+..+++|++|+|++|++++. ++.
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 278 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHH
Confidence 4899999999999874 233778899999999999988632 2 234689999999999999954 788
Q ss_pred hhhccCCCCeEecccCccccccchhhcCC-----CccCeeeccCCcccCcC----C--CCCCCCCCeeeccCCcCCCCCC
Q 005880 130 SVSSLFRLYRLDLSFNNFSGQIPLTVNHL-----THLLTLKLEANRFSGPI----T--GLDLRNLQDFNVSGNHLSGQIP 198 (672)
Q Consensus 130 ~~~~l~~L~~L~l~~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~~~~----~--~~~l~~L~~l~l~~N~l~g~~p 198 (672)
.+.++++|++|+|++|.+++..+..+... ++|+.|+|++|++++.. + ...+++|++|++++|.+++..+
T Consensus 279 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 358 (461)
T 1z7x_W 279 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGV 358 (461)
T ss_dssp HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHH
T ss_pred HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccH
Confidence 88899999999999999986655555433 79999999999998732 1 2467899999999999986544
Q ss_pred CcC--------CCCCCcccccc
Q 005880 199 KSL--------SGFPDSAFTQN 212 (672)
Q Consensus 199 ~~l--------~~~~~~~~~~n 212 (672)
..+ ..+..+.+.+|
T Consensus 359 ~~l~~~l~~~~~~L~~L~L~~n 380 (461)
T 1z7x_W 359 RELCQGLGQPGSVLRVLWLADC 380 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHcCCCCceEEEECCCC
Confidence 332 25555555555
No 395
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.99 E-value=6.2e-10 Score=116.91 Aligned_cols=142 Identities=16% Similarity=0.209 Sum_probs=105.5
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcc--cCC-cchHHHHHHHHHHHcCCC--CCceeeeEEEEEcC---CeEEEEEee
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLK--DAS-IGGKREFEQHMEVLGRLR--HPNLVGLKAYYFAR---EEKLLVSEY 437 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~e~ 437 (672)
+.++.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+. +..+.++++++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 568899999999998764 578888876 322 123457888999998886 45678888888765 458999999
Q ss_pred cCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC------------------------------------
Q 005880 438 MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC------------------------------------ 481 (672)
Q Consensus 438 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------ 481 (672)
++|..+.+.. ...++..++..++.++++.|+.||...
T Consensus 123 v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9988774321 123678889999999999999999621
Q ss_pred ------------------CCCCcEecCCCCCCEEeCCCCc--EEEeccCCCccC
Q 005880 482 ------------------KSLKLTHGNIKSTNVLLDKTGN--ARVSDFGLSIFA 515 (672)
Q Consensus 482 ------------------~~~~iiH~Dlkp~NIll~~~~~--~kl~DfG~a~~~ 515 (672)
....++|||+++.||++++++. +.|.||+.+...
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 0256999999999999997753 689999988643
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.93 E-value=3.2e-11 Score=127.03 Aligned_cols=131 Identities=18% Similarity=0.123 Sum_probs=79.3
Q ss_pred CcEeEEEecCCCcccCCCC-----CC-CCCCccEEEcccCCCCCCCC-C-CCcccccceeeccccccCCCCChhhh----
Q 005880 65 NRVSHLVLENLQLSGSLQP-----LT-SLTQLRVLSLKYNRFTGPVP-S-LSNLTALKLLFLSHNNFNGEFPDSVS---- 132 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-----l~-~l~~L~~L~L~~N~l~~~~p-~-~~~l~~L~~L~l~~N~l~g~~p~~~~---- 132 (672)
..++.|+|++|.++..... +. ..++|+.|+|++|.|+.... . ...+++|+.|+|++|+|+..-...+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 4677777777777643211 22 23577777777777764221 2 23456777777777777644333332
Q ss_pred -ccCCCCeEecccCcccc----ccchhhcCCCccCeeeccCCcccCc------CCCCCCCCCCeeeccCCcCCC
Q 005880 133 -SLFRLYRLDLSFNNFSG----QIPLTVNHLTHLLTLKLEANRFSGP------ITGLDLRNLQDFNVSGNHLSG 195 (672)
Q Consensus 133 -~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~~~------~~~~~l~~L~~l~l~~N~l~g 195 (672)
..++|++|+|++|.|+. .++..+..+++|++|+|++|+|+.. ......++|+.|+|++|.|+.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 34567777777777763 2444456677777777777777641 112345567777777777763
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.88 E-value=7.2e-11 Score=124.34 Aligned_cols=132 Identities=17% Similarity=0.197 Sum_probs=102.9
Q ss_pred CcEeEEEecCCCcccCCC-C-CCCCCCccEEEcccCCCCCCCC-CC-----CcccccceeeccccccCC----CCChhhh
Q 005880 65 NRVSHLVLENLQLSGSLQ-P-LTSLTQLRVLSLKYNRFTGPVP-SL-----SNLTALKLLFLSHNNFNG----EFPDSVS 132 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~-~-l~~l~~L~~L~L~~N~l~~~~p-~~-----~~l~~L~~L~l~~N~l~g----~~p~~~~ 132 (672)
.+++.|+|++|.++.... . ...+++|+.|+|++|.|+.... .+ ...++|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 589999999999864321 1 2346789999999999985432 22 346889999999999974 3555667
Q ss_pred ccCCCCeEecccCccccc----cchhhcCCCccCeeeccCCcccCcC--C----CCCCCCCCeeeccCCcCCCC
Q 005880 133 SLFRLYRLDLSFNNFSGQ----IPLTVNHLTHLLTLKLEANRFSGPI--T----GLDLRNLQDFNVSGNHLSGQ 196 (672)
Q Consensus 133 ~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~--~----~~~l~~L~~l~l~~N~l~g~ 196 (672)
.+++|++|+|++|+|+.. ++..+..+++|+.|+|++|+|+..- . ....++|++|+|++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 889999999999999853 3567788899999999999997621 1 22568899999999998843
No 398
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.88 E-value=3.7e-10 Score=115.75 Aligned_cols=181 Identities=20% Similarity=0.198 Sum_probs=121.9
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCC-CCc--eeeeEEEEEcCC---eEEEEEeecC
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR-HPN--LVGLKAYYFARE---EKLLVSEYMP 439 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~~ 439 (672)
+.++.|.+..||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+++......+ ..|+|||+++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 457889999999863 45888886532 24567899999998773 333 334444433332 3478999999
Q ss_pred CCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC--------------------------------------
Q 005880 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC-------------------------------------- 481 (672)
Q Consensus 440 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-------------------------------------- 481 (672)
|.+|.+... ..++..++..++.++++.|+.||...
T Consensus 100 G~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 100 GVPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CEECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CeECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 988865432 12677888899999999999999510
Q ss_pred ----------------CCCCcEecCCCCCCEEeCC--CCcEEEeccCCCccCCCC----CCCCC---C----------cc
Q 005880 482 ----------------KSLKLTHGNIKSTNVLLDK--TGNARVSDFGLSIFAPPS----TVPRS---N----------GY 526 (672)
Q Consensus 482 ----------------~~~~iiH~Dlkp~NIll~~--~~~~kl~DfG~a~~~~~~----~~~~t---~----------~y 526 (672)
....++|+|++|.||++++ +..+.|+||+.+....+. ..... . +|
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 1135899999999999998 456789999998655432 00000 0 12
Q ss_pred --cC-CCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 005880 527 --RA-PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSV 563 (672)
Q Consensus 527 --~a-PE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~ 563 (672)
.. |+.. .......+.|++|.++|++.+|+.+|.
T Consensus 253 ~~~~~~~~~----~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 253 KHKDIPTVL----EKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp TCSCHHHHH----HHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCcHHHH----HHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 11 1211 011223689999999999999987763
No 399
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.77 E-value=1.4e-08 Score=105.07 Aligned_cols=53 Identities=9% Similarity=0.269 Sum_probs=36.2
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeec
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFL 118 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l 118 (672)
.+++.|+|.+ +++.+.+. |.++++|+.|+|++|.++.+.+ .|.++.++..|.+
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~ 155 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPL 155 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECT
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecC
Confidence 5788889988 78776655 8899999999999998764444 4444444443333
No 400
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.71 E-value=2.1e-08 Score=103.89 Aligned_cols=60 Identities=10% Similarity=0.058 Sum_probs=46.9
Q ss_pred CCcEeEEEecCCCcc--------------------cCCCC-CCC--------CCCccEEEcccCCCCCCCC-CCCccccc
Q 005880 64 QNRVSHLVLENLQLS--------------------GSLQP-LTS--------LTQLRVLSLKYNRFTGPVP-SLSNLTAL 113 (672)
Q Consensus 64 ~~~v~~L~l~~~~l~--------------------~~~~~-l~~--------l~~L~~L~L~~N~l~~~~p-~~~~l~~L 113 (672)
..+++.|||++|++. .+++. |.+ +++|+.|+|.+ +++.+.+ .|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 457889999998887 11222 667 89999999999 8887666 79999999
Q ss_pred ceeeccccccC
Q 005880 114 KLLFLSHNNFN 124 (672)
Q Consensus 114 ~~L~l~~N~l~ 124 (672)
+.|+|++|.++
T Consensus 127 ~~l~l~~n~i~ 137 (329)
T 3sb4_A 127 KICQIRKKTAP 137 (329)
T ss_dssp CEEEBCCSSCC
T ss_pred ceEEcCCCCcc
Confidence 99999999875
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.66 E-value=2.2e-09 Score=120.62 Aligned_cols=85 Identities=15% Similarity=0.067 Sum_probs=35.6
Q ss_pred ccccceeecccc--ccCCCCChhhhc-cCCCCeEecccCcccc-ccchhhcCCCccCeeeccCCcccCc-CC--CCCCCC
Q 005880 110 LTALKLLFLSHN--NFNGEFPDSVSS-LFRLYRLDLSFNNFSG-QIPLTVNHLTHLLTLKLEANRFSGP-IT--GLDLRN 182 (672)
Q Consensus 110 l~~L~~L~l~~N--~l~g~~p~~~~~-l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~-~~--~~~l~~ 182 (672)
+++|++|+|++| .+++..+..++. +++|+.|+|++|++++ .++..+..+++|+.|+|++|+|++. ++ ...+++
T Consensus 435 ~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~ 514 (592)
T 3ogk_B 435 CKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPS 514 (592)
T ss_dssp CTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSS
T ss_pred CCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCc
Confidence 444444444421 233333333332 4445555555554443 2233334444555555555544331 11 123444
Q ss_pred CCeeeccCCcCC
Q 005880 183 LQDFNVSGNHLS 194 (672)
Q Consensus 183 L~~l~l~~N~l~ 194 (672)
|+.|+|++|+++
T Consensus 515 L~~L~ls~n~it 526 (592)
T 3ogk_B 515 LRYLWVQGYRAS 526 (592)
T ss_dssp CCEEEEESCBCC
T ss_pred cCeeECcCCcCC
Confidence 555555555544
No 402
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.57 E-value=1.3e-07 Score=97.39 Aligned_cols=133 Identities=16% Similarity=0.148 Sum_probs=98.7
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCC----CceeeeEEEEEcCCeEEEEEeecCCC
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRH----PNLVGLKAYYFAREEKLLVSEYMPNG 441 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e~~~~g 441 (672)
+.++.|....||+. |..+++|+..... ....+.+|.+++..+.+ ..+.+++++ +..++||||++|.
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~ 112 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGE 112 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCB
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCc
Confidence 56889999999998 6678888764322 24568899988887765 223445544 5678999999999
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCC---------------------------------------
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK--------------------------------------- 482 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~--------------------------------------- 482 (672)
++.+... ..++..++..++.++++.|+.||....
T Consensus 113 ~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (320)
T 3r70_A 113 RITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEM 185 (320)
T ss_dssp CCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred ccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccc
Confidence 8864332 126777888899999999999995322
Q ss_pred --------------------CCCcEecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 483 --------------------SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 483 --------------------~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
...++|+|++|.||+++++..+.|+||+.+...
T Consensus 186 ~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 186 LEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 123599999999999998666799999987543
No 403
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.54 E-value=2.7e-07 Score=93.21 Aligned_cols=141 Identities=19% Similarity=0.185 Sum_probs=93.2
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCC---ceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHP---NLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
+.|+.|.++.||++...+|+.++||+...........|.+|++.|+.+++. .+.+++++. ..++||||+++++
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 568999999999999888999999997544333456789999999999765 577787763 4689999999987
Q ss_pred hhH-----------HhhcCCCC--C--------------CCCCCHHHHHH---H-----------------HHHHHHHHH
Q 005880 443 LFW-----------LLHGNRGP--G--------------RTPLDWTTRLK---I-----------------AAGAARGLA 475 (672)
Q Consensus 443 L~~-----------~l~~~~~~--~--------------~~~l~~~~~~~---i-----------------~~~ia~~L~ 475 (672)
+.. .||..... + ...-+|..... + ...+-+.++
T Consensus 97 ~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~~ 176 (288)
T 3d1u_A 97 PTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLD 176 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 531 23332110 0 01124543211 0 111112223
Q ss_pred HHHh---hCCCCCcEecCCCCCCEEeCCCCcEEEeccCCC
Q 005880 476 FIHF---TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS 512 (672)
Q Consensus 476 ~LH~---~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a 512 (672)
.|.. ......++|+|+.+.||++++ +.+.|.|| .+
T Consensus 177 ~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~ 214 (288)
T 3d1u_A 177 ALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AA 214 (288)
T ss_dssp THHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CC
T ss_pred HHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-Cc
Confidence 3321 112467999999999999988 45889999 55
No 404
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.52 E-value=4.7e-08 Score=96.88 Aligned_cols=100 Identities=21% Similarity=0.228 Sum_probs=66.6
Q ss_pred CCCCccE--EEcccCCCCC---CCC-CCCcccccceeeccccccCC--CCChhhhccCCCCeEecccCccccccchhhcC
Q 005880 86 SLTQLRV--LSLKYNRFTG---PVP-SLSNLTALKLLFLSHNNFNG--EFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNH 157 (672)
Q Consensus 86 ~l~~L~~--L~L~~N~l~~---~~p-~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~ 157 (672)
..+.|+. ++++.|+... .++ ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..
T Consensus 139 ~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~ 216 (267)
T 3rw6_A 139 SDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDK 216 (267)
T ss_dssp GCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGG
T ss_pred CCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhh
Confidence 3344544 5666664331 112 12467788888888888886 5567777888888888888888854 34444
Q ss_pred CC--ccCeeeccCCcccCcCC---------CCCCCCCCeee
Q 005880 158 LT--HLLTLKLEANRFSGPIT---------GLDLRNLQDFN 187 (672)
Q Consensus 158 l~--~L~~L~l~~N~l~~~~~---------~~~l~~L~~l~ 187 (672)
+. +|++|+|++|.+++..+ ...+++|+.||
T Consensus 217 l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 217 IKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred cccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 54 78888888888887443 23577777775
No 405
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.46 E-value=1.2e-08 Score=114.68 Aligned_cols=125 Identities=12% Similarity=0.054 Sum_probs=88.2
Q ss_pred cEeEEEecCCC-ccc-CCCC-CCCCCCccEEEcccCCCCCCC----C-CCCcccccceeeccccccC----CCCChhhhc
Q 005880 66 RVSHLVLENLQ-LSG-SLQP-LTSLTQLRVLSLKYNRFTGPV----P-SLSNLTALKLLFLSHNNFN----GEFPDSVSS 133 (672)
Q Consensus 66 ~v~~L~l~~~~-l~~-~~~~-l~~l~~L~~L~L~~N~l~~~~----p-~~~~l~~L~~L~l~~N~l~----g~~p~~~~~ 133 (672)
+++.|+|+++. ++. .+.. ..++++|++|+|++|.+++.- + .+.++++|+.|+|++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 49999999886 211 0111 347889999999999987652 2 2457889999999999997 345556678
Q ss_pred cCCCCeEecccCccccccchhhcCCCccCeeeccCCcccC-----cCCCCCCCCCCeeeccCC
Q 005880 134 LFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG-----PITGLDLRNLQDFNVSGN 191 (672)
Q Consensus 134 l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-----~~~~~~l~~L~~l~l~~N 191 (672)
+++|+.|+|++|.+.+ +|..+.++++|+.|+++++.... ......+++|+.|+++++
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 280 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM 280 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCcccc
Confidence 8999999999999985 77888889999999987643221 112234455555555554
No 406
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.43 E-value=2e-08 Score=94.56 Aligned_cols=111 Identities=15% Similarity=0.152 Sum_probs=72.2
Q ss_pred CCCCCCccEEEcccC-CCCCC-----CCCCCcccccceeeccccccCCC----CChhhhccCCCCeEecccCccccc---
Q 005880 84 LTSLTQLRVLSLKYN-RFTGP-----VPSLSNLTALKLLFLSHNNFNGE----FPDSVSSLFRLYRLDLSFNNFSGQ--- 150 (672)
Q Consensus 84 l~~l~~L~~L~L~~N-~l~~~-----~p~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~--- 150 (672)
+...++|++|+|++| .|... ...+...++|++|+|++|+|... +...+...++|++|+|++|+|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 455677777777777 76631 11345567777788888777632 334455557788888888887743
Q ss_pred -cchhhcCCCccCeeec--cCCcccCcC--C----CCCCCCCCeeeccCCcCC
Q 005880 151 -IPLTVNHLTHLLTLKL--EANRFSGPI--T----GLDLRNLQDFNVSGNHLS 194 (672)
Q Consensus 151 -~p~~~~~l~~L~~L~l--~~N~l~~~~--~----~~~l~~L~~l~l~~N~l~ 194 (672)
+...+...++|++|+| ++|.|+..- . ....++|++|+|++|.+.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4556666777888888 778776411 1 124567888888888764
No 407
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.40 E-value=9.3e-07 Score=88.49 Aligned_cols=135 Identities=19% Similarity=0.190 Sum_probs=97.1
Q ss_pred ccCcCCeE-EEEEEEEc-CCcEEEEEEcccCCcchHHHHHHHHHHHcCCC-CCceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 367 MLGKGGFG-TAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 367 ~lg~G~~g-~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.+..|..| .||+.... ++..++||+-... ...++.+|...|+.+. +--+-++++++.+.+..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34456555 68988754 4677889986532 4567888999888774 33366788899888999999999999888
Q ss_pred hHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-------------------------------------------
Q 005880 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT------------------------------------------- 480 (672)
Q Consensus 444 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------------------------------------------- 480 (672)
.+..... ......++.++++.|+.||..
T Consensus 108 ~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 108 FQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred cccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 7765422 123345677777777778721
Q ss_pred -----------CCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 481 -----------CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 481 -----------~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
.....++|+|+.+.||++++++.+-|+||+.+.
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 001127999999999999987777899998763
No 408
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.39 E-value=1.4e-06 Score=89.07 Aligned_cols=136 Identities=16% Similarity=0.067 Sum_probs=96.7
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCC---ceeeeEEEEE-cCCeEEEEEeecCCC
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHP---NLVGLKAYYF-AREEKLLVSEYMPNG 441 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~g 441 (672)
+.++.|....||+. |..++||+-.. ......+.+|.++|+.+.+. .+.+++.++. ..+..++||||++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 45788888999987 56678887432 22456789999999988642 3556666664 455678999999998
Q ss_pred ChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC----------------------------------------
Q 005880 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC---------------------------------------- 481 (672)
Q Consensus 442 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---------------------------------------- 481 (672)
++.+..-. .++..++..++.++++.|+.||...
T Consensus 99 ~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 99 ILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp ECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred ECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 88764221 2455666677777777777777421
Q ss_pred ----------------CCCCcEecCCCCCCEEeCC---CCc-EEEeccCCCcc
Q 005880 482 ----------------KSLKLTHGNIKSTNVLLDK---TGN-ARVSDFGLSIF 514 (672)
Q Consensus 482 ----------------~~~~iiH~Dlkp~NIll~~---~~~-~kl~DfG~a~~ 514 (672)
....++|+|+++.||++++ ++. ..|+||+.+..
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1235699999999999987 455 48999997643
No 409
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.35 E-value=3.4e-08 Score=110.91 Aligned_cols=108 Identities=14% Similarity=0.089 Sum_probs=59.0
Q ss_pred CCCccEEEcccCCCCCCCC-CCC-cccccceeecc--c----cccCCC-----CChhhhccCCCCeEecccCccccccch
Q 005880 87 LTQLRVLSLKYNRFTGPVP-SLS-NLTALKLLFLS--H----NNFNGE-----FPDSVSSLFRLYRLDLSFNNFSGQIPL 153 (672)
Q Consensus 87 l~~L~~L~L~~N~l~~~~p-~~~-~l~~L~~L~l~--~----N~l~g~-----~p~~~~~l~~L~~L~l~~N~l~g~~p~ 153 (672)
+++|+.|+++.|.+++... .+. ++++|+.|+|+ + |++++. ++..+.++++|+.|+|++ ++++..+.
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHH
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHH
Confidence 5666666666666664332 332 45666666666 3 444421 112245566666666655 55544444
Q ss_pred hhcC-CCccCeeeccCCcccCcC--CC-CCCCCCCeeeccCCcCCC
Q 005880 154 TVNH-LTHLLTLKLEANRFSGPI--TG-LDLRNLQDFNVSGNHLSG 195 (672)
Q Consensus 154 ~~~~-l~~L~~L~l~~N~l~~~~--~~-~~l~~L~~l~l~~N~l~g 195 (672)
.++. +++|+.|+|++|.+++.. .. ..+++|+.|+|++|.+++
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 4544 666666666666665411 11 235666666666666643
No 410
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.31 E-value=5.2e-08 Score=91.74 Aligned_cols=109 Identities=19% Similarity=0.235 Sum_probs=86.4
Q ss_pred CCcEeEEEecCC-CcccC-----CCCCCCCCCccEEEcccCCCCCCC----C-CCCcccccceeeccccccCCC----CC
Q 005880 64 QNRVSHLVLENL-QLSGS-----LQPLTSLTQLRVLSLKYNRFTGPV----P-SLSNLTALKLLFLSHNNFNGE----FP 128 (672)
Q Consensus 64 ~~~v~~L~l~~~-~l~~~-----~~~l~~l~~L~~L~L~~N~l~~~~----p-~~~~l~~L~~L~l~~N~l~g~----~p 128 (672)
...+++|+|++| .+... ...+...++|++|+|++|.|+..- . .+...++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 467999999999 88642 122677889999999999997421 1 355668899999999999853 45
Q ss_pred hhhhccCCCCeEec--ccCccccc----cchhhcCCCccCeeeccCCccc
Q 005880 129 DSVSSLFRLYRLDL--SFNNFSGQ----IPLTVNHLTHLLTLKLEANRFS 172 (672)
Q Consensus 129 ~~~~~l~~L~~L~l--~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~ 172 (672)
..+...+.|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 66777889999999 88999854 4455667799999999999885
No 411
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.25 E-value=2.7e-06 Score=88.96 Aligned_cols=73 Identities=12% Similarity=0.013 Sum_probs=54.6
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCc--eeeeEEEEEcC-CeEEEEEeecCCCC
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPN--LVGLKAYYFAR-EEKLLVSEYMPNGS 442 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~~g~ 442 (672)
+.++.|....+|+... +|..+++|..... ..+.+|..++..+.... +.++++++.+. +..++||||++|.+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 4578899999999886 4788999987532 35888888888775433 45677776654 66899999999866
Q ss_pred hh
Q 005880 443 LF 444 (672)
Q Consensus 443 L~ 444 (672)
+.
T Consensus 121 l~ 122 (362)
T 3ovc_A 121 LQ 122 (362)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.23 E-value=2.4e-07 Score=96.59 Aligned_cols=128 Identities=17% Similarity=0.167 Sum_probs=69.2
Q ss_pred CcEeEEEecCCCcccCCCCCCCCCCccEEEcccCCCCCCCC-CC--Ccccccceeeccc--cccCCC-----CChhh--h
Q 005880 65 NRVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVP-SL--SNLTALKLLFLSH--NNFNGE-----FPDSV--S 132 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~--~~l~~L~~L~l~~--N~l~g~-----~p~~~--~ 132 (672)
.+++.|+|++|.-. .++.+. +++|+.|+|..+.++...- .+ ..+++|+.|+|+. |...|. +...+ .
T Consensus 172 P~L~~L~L~g~~~l-~l~~~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~ 249 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL-SIGKKP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKD 249 (362)
T ss_dssp TTCCEEEEECCBTC-BCCSCB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTT
T ss_pred CCCcEEEEeCCCCc-eecccc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcC
Confidence 46777777665211 122232 6677777777666543211 22 2566777777653 222111 11112 2
Q ss_pred ccCCCCeEecccCccccccchhhc---CCCccCeeeccCCcccCc----CC--CCCCCCCCeeeccCCcCC
Q 005880 133 SLFRLYRLDLSFNNFSGQIPLTVN---HLTHLLTLKLEANRFSGP----IT--GLDLRNLQDFNVSGNHLS 194 (672)
Q Consensus 133 ~l~~L~~L~l~~N~l~g~~p~~~~---~l~~L~~L~l~~N~l~~~----~~--~~~l~~L~~l~l~~N~l~ 194 (672)
.+++|+.|+|++|.+++..+..+. .+++|++|+|+.|+|++. +. ...+++|+.|+|++|.++
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 356777777777777654443333 466777777777777551 11 124567777777777665
No 413
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.17 E-value=1.5e-06 Score=90.78 Aligned_cols=80 Identities=6% Similarity=-0.034 Sum_probs=55.2
Q ss_pred ccc-CcCCeEEEEEEEEc-------CCcEEEEEEcccCC---cchHHHHHHHHHHHcCCC-C--CceeeeEEEEEcC---
Q 005880 366 EML-GKGGFGTAYKAVLD-------DGSVVAVKRLKDAS---IGGKREFEQHMEVLGRLR-H--PNLVGLKAYYFAR--- 428 (672)
Q Consensus 366 ~~l-g~G~~g~Vy~~~~~-------~g~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~--- 428 (672)
+.| +.|....+|+.... ++..+++|+..... ......+.+|+++++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78999999998764 26778899865432 111245778888887774 2 3466778777554
Q ss_pred CeEEEEEeecCCCChhH
Q 005880 429 EEKLLVSEYMPNGSLFW 445 (672)
Q Consensus 429 ~~~~lv~e~~~~g~L~~ 445 (672)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999877653
No 414
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.05 E-value=4.5e-07 Score=101.66 Aligned_cols=131 Identities=16% Similarity=0.091 Sum_probs=90.7
Q ss_pred CcEeEEEecCC-CcccC-CCC-CCCCCCccEEEcccCCCCCCCC-C----CCcccccceeeccccc--cCC-CCChhhhc
Q 005880 65 NRVSHLVLENL-QLSGS-LQP-LTSLTQLRVLSLKYNRFTGPVP-S----LSNLTALKLLFLSHNN--FNG-EFPDSVSS 133 (672)
Q Consensus 65 ~~v~~L~l~~~-~l~~~-~~~-l~~l~~L~~L~L~~N~l~~~~p-~----~~~l~~L~~L~l~~N~--l~g-~~p~~~~~ 133 (672)
.+++.|+|++| .++.. ++. +.++++|++|+|++|.+++..+ . ...+++|+.|+|++|. ++. .++..+.+
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~ 209 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTR 209 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHh
Confidence 58999999998 55432 222 4578999999999999887543 2 3377899999999997 221 12222355
Q ss_pred cCCCCeEecccC-ccccccchhhcCCCccCeeeccCCcc--------------------------cC----cCCC--CCC
Q 005880 134 LFRLYRLDLSFN-NFSGQIPLTVNHLTHLLTLKLEANRF--------------------------SG----PITG--LDL 180 (672)
Q Consensus 134 l~~L~~L~l~~N-~l~g~~p~~~~~l~~L~~L~l~~N~l--------------------------~~----~~~~--~~l 180 (672)
+++|+.|+|++| .++ .+|..+.++++|+.|+++.+.. .. .++. ..+
T Consensus 210 ~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~ 288 (594)
T 2p1m_B 210 CPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVC 288 (594)
T ss_dssp CTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHH
T ss_pred CCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhh
Confidence 689999999998 555 4888888888888888665521 11 0110 146
Q ss_pred CCCCeeeccCCcCCCC
Q 005880 181 RNLQDFNVSGNHLSGQ 196 (672)
Q Consensus 181 ~~L~~l~l~~N~l~g~ 196 (672)
++|+.|+|++|.+++.
T Consensus 289 ~~L~~L~L~~~~l~~~ 304 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSY 304 (594)
T ss_dssp TTCCEEECTTCCCCHH
T ss_pred CCCCEEEccCCCCCHH
Confidence 7899999999987754
No 415
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.03 E-value=1.8e-05 Score=83.91 Aligned_cols=124 Identities=10% Similarity=0.080 Sum_probs=80.2
Q ss_pred CcEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEec
Q 005880 65 NRVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDL 142 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 142 (672)
..++.+.|.++ ++.+... |.++++|+.|+|..| ++.+.. .|.+ .+|+.+.| .|+++..-+..|.++++|+.+++
T Consensus 203 ~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 203 AGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEE
T ss_pred cccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEe
Confidence 45777788744 5554444 788888888888875 443333 5555 67777777 44455344566777777888877
Q ss_pred ccCccc-----cccchhhcCCCccCeeeccCCcccC--cCCCCCCCCCCeeeccCCcCC
Q 005880 143 SFNNFS-----GQIPLTVNHLTHLLTLKLEANRFSG--PITGLDLRNLQDFNVSGNHLS 194 (672)
Q Consensus 143 ~~N~l~-----g~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~l~~L~~l~l~~N~l~ 194 (672)
.+|.+. ..-+..|.+|++|+.++|.+ +++. .-.+..+.+|+.|+|.+| ++
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~ 335 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VT 335 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CC
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-cc
Confidence 777664 23345677777777777773 3543 334556777777777544 44
No 416
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.00 E-value=2.6e-05 Score=80.66 Aligned_cols=142 Identities=18% Similarity=0.211 Sum_probs=79.7
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCC-----CCCceeeeE-E--EEEcCCeEEEEEee
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-----RHPNLVGLK-A--YYFAREEKLLVSEY 437 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~-~--~~~~~~~~~lv~e~ 437 (672)
+.|+.|..+.||+....+|. +++|+.... ..++..|.++++.+ ..|.++... | +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGA-VCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTEE-EEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCCC-EEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 34666778899999876554 889988752 23334455544444 234444311 0 12246678999999
Q ss_pred cCCCChh--------------HHhhcCC--C--C-C----CCCCCHHHHH------------------------------
Q 005880 438 MPNGSLF--------------WLLHGNR--G--P-G----RTPLDWTTRL------------------------------ 464 (672)
Q Consensus 438 ~~~g~L~--------------~~l~~~~--~--~-~----~~~l~~~~~~------------------------------ 464 (672)
++|..+. ..+|... . . . ...-.|....
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 1122110 0 0 0 0112343211
Q ss_pred -HHHHHHHHHHHHHHh--------h-CCCCCcEecCCCCCCEEeCCCCcEEEeccCCC
Q 005880 465 -KIAAGAARGLAFIHF--------T-CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS 512 (672)
Q Consensus 465 -~i~~~ia~~L~~LH~--------~-~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a 512 (672)
.+...+.+++.+|+. . .....++|||+++.||+++.++.+.|+||+.+
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 111223445666653 0 01478999999999999988889999999965
No 417
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.00 E-value=2.3e-06 Score=89.24 Aligned_cols=130 Identities=15% Similarity=0.187 Sum_probs=89.6
Q ss_pred CcEeEEEecCCCccc---------CCCC-CCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhh--
Q 005880 65 NRVSHLVLENLQLSG---------SLQP-LTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVS-- 132 (672)
Q Consensus 65 ~~v~~L~l~~~~l~~---------~~~~-l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~-- 132 (672)
.+++.|.+.++.... .+.. +..+++|+.|+|++|.-.. ++.+ .+++|+.|+|..|.++......+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~-l~~~-~~~~L~~L~L~~~~l~~~~l~~l~~~ 216 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS-IGKK-PRPNLKSLEIISGGLPDSVVEDILGS 216 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB-CCSC-BCTTCSEEEEECSBCCHHHHHHHHHS
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce-eccc-cCCCCcEEEEecCCCChHHHHHHHHc
Confidence 588999987654321 1212 5678999999999884112 3334 389999999999988754444555
Q ss_pred ccCCCCeEeccc--Cccccc-----cchhh--cCCCccCeeeccCCcccCcC-----CCCCCCCCCeeeccCCcCCCC
Q 005880 133 SLFRLYRLDLSF--NNFSGQ-----IPLTV--NHLTHLLTLKLEANRFSGPI-----TGLDLRNLQDFNVSGNHLSGQ 196 (672)
Q Consensus 133 ~l~~L~~L~l~~--N~l~g~-----~p~~~--~~l~~L~~L~l~~N~l~~~~-----~~~~l~~L~~l~l~~N~l~g~ 196 (672)
.+++|+.|+|+. |...|. +...+ ..+++|+.|+|++|.+.... ....+++|++|+|+.|.|++.
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 789999999964 332221 11122 35789999999999987521 113578999999999999863
No 418
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.94 E-value=3.4e-05 Score=81.67 Aligned_cols=122 Identities=13% Similarity=0.124 Sum_probs=66.9
Q ss_pred cEeEEEecCCCcccCCCC-CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecc
Q 005880 66 RVSHLVLENLQLSGSLQP-LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLS 143 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 143 (672)
.++.+.|.+ .++.+... |.++++|+.++|++|+++.+.. .|. ..+|+.+.|.+| ++..-...|.++++|+.++|.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 477777765 55544443 7778888888888887776555 343 466777777643 553334456666666666666
Q ss_pred cCccccccchhhcCCCccCeeeccCCcccC--cCCCCCCCCCCeeeccCCcC
Q 005880 144 FNNFSGQIPLTVNHLTHLLTLKLEANRFSG--PITGLDLRNLQDFNVSGNHL 193 (672)
Q Consensus 144 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~l~~L~~l~l~~N~l 193 (672)
.| ++..-...|.+ .+|+.+.| .|+++. .-.+..+++|+.+++.+|.+
T Consensus 235 ~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~ 283 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTF 283 (401)
T ss_dssp TT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCC
T ss_pred CC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccc
Confidence 54 33222223333 44555555 222322 22333445555555544443
No 419
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.86 E-value=4.6e-05 Score=80.69 Aligned_cols=74 Identities=15% Similarity=0.110 Sum_probs=48.2
Q ss_pred cccCcCCeEEEEEEEEc-CCcEEEEEEcccCCc-------chHHHHHHHHHHHcCCCC--Ccee-eeEEEEEcCCeEEEE
Q 005880 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASI-------GGKREFEQHMEVLGRLRH--PNLV-GLKAYYFAREEKLLV 434 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~niv-~l~~~~~~~~~~~lv 434 (672)
+.+|.|.++.||++... +++.++||....... .....+..|.++++.+.. +..+ +++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 56899999999999754 468899998653211 123456778888877632 3333 45543 45566899
Q ss_pred EeecCCC
Q 005880 435 SEYMPNG 441 (672)
Q Consensus 435 ~e~~~~g 441 (672)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 420
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.79 E-value=0.0001 Score=74.87 Aligned_cols=140 Identities=16% Similarity=0.113 Sum_probs=92.0
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCC---CCceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR---HPNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
+.|+.|.+..+|+.... +..++||+.... ....+..|.+.|+.+. ...+.++++++...+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 45888999999998864 677888987533 3567889998888773 3567888888888888999999999876
Q ss_pred hhH-----------HhhcCCC-C--C--------------CCCCCHHHHH---HHHH--H--------------HHHHH-
Q 005880 443 LFW-----------LLHGNRG-P--G--------------RTPLDWTTRL---KIAA--G--------------AARGL- 474 (672)
Q Consensus 443 L~~-----------~l~~~~~-~--~--------------~~~l~~~~~~---~i~~--~--------------ia~~L- 474 (672)
+.. .||.... . + ...-+|.... ++.. + +.+.+
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 521 2332211 0 0 0112565432 1111 1 11111
Q ss_pred HHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccC
Q 005880 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510 (672)
Q Consensus 475 ~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG 510 (672)
..|........++|+|+.+.|++++.++ +.|.||+
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 2232112246799999999999999887 8899974
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.65 E-value=0.00012 Score=73.65 Aligned_cols=74 Identities=19% Similarity=0.197 Sum_probs=54.5
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCC---CceeeeEEEEEcCCeEEEEEeecCCCC
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRH---PNLVGLKAYYFAREEKLLVSEYMPNGS 442 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~~~~~lv~e~~~~g~ 442 (672)
+.+|.|..+.||+.+..+|+.|+||+-..........|..|.+.|+.+.- --+.+++++. ..++||||++.+.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecccC
Confidence 56899999999999999999999998765444345578889988877732 1244455442 3478999998765
Q ss_pred h
Q 005880 443 L 443 (672)
Q Consensus 443 L 443 (672)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 422
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.53 E-value=0.00031 Score=74.85 Aligned_cols=76 Identities=14% Similarity=0.201 Sum_probs=49.5
Q ss_pred CCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCCCCC------CCcccCCCccccC-CCCCCchhHHHHHHHHHHHH
Q 005880 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPR------SNGYRAPELSSSD-GRKQSQKSDVYSFGVLLLEL 555 (672)
Q Consensus 483 ~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~------t~~y~aPE~l~~~-~~~~~~~~DV~S~Gvvl~el 555 (672)
...++|||++|.||++++++ ++++||+.+....+....+ ...|.+|+..... +.......++.+....+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 57899999999999998876 9999999886544321111 1235666532211 11122345667888888888
Q ss_pred HhCC
Q 005880 556 LTGK 559 (672)
Q Consensus 556 ~tg~ 559 (672)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 423
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.30 E-value=0.0011 Score=67.82 Aligned_cols=144 Identities=12% Similarity=0.025 Sum_probs=81.6
Q ss_pred ccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCC--ceeeeEEE-----EEcCCeEEEEEeecC
Q 005880 367 MLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHP--NLVGLKAY-----YFAREEKLLVSEYMP 439 (672)
Q Consensus 367 ~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~-----~~~~~~~~lv~e~~~ 439 (672)
.++ |....||+....+|+.+++|....... ....+..|..++..+... .+.+++.. ....+..++||||++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 355 777899998877787899999864321 345667777777666321 23334332 122456688999998
Q ss_pred CCChh-----H---------Hhhc----CCCCCCCCCCHHHH----HHH---------------HHHHHHHHHHHHhhC-
Q 005880 440 NGSLF-----W---------LLHG----NRGPGRTPLDWTTR----LKI---------------AAGAARGLAFIHFTC- 481 (672)
Q Consensus 440 ~g~L~-----~---------~l~~----~~~~~~~~l~~~~~----~~i---------------~~~ia~~L~~LH~~~- 481 (672)
|..+. . .+|. .....+...++... ..+ ...+.+.++.+....
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 75432 0 0111 11011122333221 001 111122233333221
Q ss_pred --CCCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 482 --KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 482 --~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
....++|||+++.||+++ + .+.|+||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 235689999999999999 4 899999987643
No 424
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.30 E-value=0.00034 Score=70.87 Aligned_cols=141 Identities=11% Similarity=0.025 Sum_probs=73.5
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCce-eeeEEEEEcCCeEEEEEeec-CCCCh
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNL-VGLKAYYFAREEKLLVSEYM-PNGSL 443 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~g~L 443 (672)
+.|+.|....+|+. ..+++|+...... ...+..+|+.+++.+....+ .+++++ +.+..++|+||+ ++-++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 56888999999998 4578888764321 11123457766665532223 344443 444567899999 55444
Q ss_pred hH------------------HhhcCCCCCCCCCC-HHHHHHHHHH--------------HHHHHH----HHHhhCCCCCc
Q 005880 444 FW------------------LLHGNRGPGRTPLD-WTTRLKIAAG--------------AARGLA----FIHFTCKSLKL 486 (672)
Q Consensus 444 ~~------------------~l~~~~~~~~~~l~-~~~~~~i~~~--------------ia~~L~----~LH~~~~~~~i 486 (672)
.. .+|..........+ +.....+... +.+.+. .+........+
T Consensus 96 ~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l 175 (301)
T 3dxq_A 96 SPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAA 175 (301)
T ss_dssp CHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEE
T ss_pred CHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCcee
Confidence 21 11111100000011 1111111110 111111 11111123458
Q ss_pred EecCCCCCCEEeCCCCcEEEeccCCCccC
Q 005880 487 THGNIKSTNVLLDKTGNARVSDFGLSIFA 515 (672)
Q Consensus 487 iH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 515 (672)
+|+|+.+.||+ ..++.+.++||..+...
T Consensus 176 ~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 176 CHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp ECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred eccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 99999999999 56677899999987543
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.25 E-value=7.7e-05 Score=68.47 Aligned_cols=83 Identities=10% Similarity=0.132 Sum_probs=50.1
Q ss_pred CCccEEEcccCCCCCC-CCCCCcccccceeeccccc-cCCCCChhhhcc----CCCCeEecccCc-cccccchhhcCCCc
Q 005880 88 TQLRVLSLKYNRFTGP-VPSLSNLTALKLLFLSHNN-FNGEFPDSVSSL----FRLYRLDLSFNN-FSGQIPLTVNHLTH 160 (672)
Q Consensus 88 ~~L~~L~L~~N~l~~~-~p~~~~l~~L~~L~l~~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~g~~p~~~~~l~~ 160 (672)
.+|+.|||+++.++.. +..+.++++|+.|+|+++. ++..--..++.+ ++|++|+|+++. ||..==..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 3678888888776632 2346677777777777774 554323334443 257777777753 65332234556666
Q ss_pred cCeeeccCCc
Q 005880 161 LLTLKLEANR 170 (672)
Q Consensus 161 L~~L~l~~N~ 170 (672)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7666666653
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.24 E-value=6.4e-05 Score=69.02 Aligned_cols=81 Identities=11% Similarity=0.034 Sum_probs=41.6
Q ss_pred cEeEEEecCCCcccC-CCCCCCCCCccEEEcccCC-CCCC-CCCCCcc----cccceeeccccc-cCCCCChhhhccCCC
Q 005880 66 RVSHLVLENLQLSGS-LQPLTSLTQLRVLSLKYNR-FTGP-VPSLSNL----TALKLLFLSHNN-FNGEFPDSVSSLFRL 137 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~-~~~l~~l~~L~~L~L~~N~-l~~~-~p~~~~l----~~L~~L~l~~N~-l~g~~p~~~~~l~~L 137 (672)
++++|||+++.++.. +..+..+++|+.|+|+++. |+.. +..++.+ ++|++|+|+++. ++..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 466666666655421 2225566666666666653 4421 1123332 356666666653 553323345556666
Q ss_pred CeEecccCc
Q 005880 138 YRLDLSFNN 146 (672)
Q Consensus 138 ~~L~l~~N~ 146 (672)
+.|+|++..
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666653
No 427
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.18 E-value=0.002 Score=65.77 Aligned_cols=145 Identities=9% Similarity=0.066 Sum_probs=79.7
Q ss_pred cccCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCC-----CCceeeeE-E--EEEcCCeEEEEEee
Q 005880 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR-----HPNLVGLK-A--YYFAREEKLLVSEY 437 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~-~--~~~~~~~~~lv~e~ 437 (672)
+.|+.|....+|+....+| .+++|...... ...++..|++++..+. -|.++... | +....+..+++++|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 4567788899999987766 57789886521 2234556666665553 23333210 1 11224567899999
Q ss_pred cCCCChhH--------------HhhcC--CCCCC-----CCCCHHHHHH------------HHHHHHHHHHHHHhhC---
Q 005880 438 MPNGSLFW--------------LLHGN--RGPGR-----TPLDWTTRLK------------IAAGAARGLAFIHFTC--- 481 (672)
Q Consensus 438 ~~~g~L~~--------------~l~~~--~~~~~-----~~l~~~~~~~------------i~~~ia~~L~~LH~~~--- 481 (672)
++|..+.. .+|.. ..... ....|..... +...+.+.+++++...
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98865421 12211 00000 0112333111 0112445566665432
Q ss_pred CCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 482 ~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
....++|+|+.+.||+++++..+.|+||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 13569999999999999987666899998653
No 428
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.18 E-value=0.0017 Score=66.57 Aligned_cols=144 Identities=15% Similarity=0.090 Sum_probs=72.0
Q ss_pred ccCcCCeEE-EEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCC--CceeeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 367 MLGKGGFGT-AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRH--PNLVGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 367 ~lg~G~~g~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
.|+.|.... +|+....+|..+++|....... .++..|++++..+.. -.+.+++.+.... -++|||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcch
Confidence 455555544 6677654467777876543221 233455555555531 2345566553333 3789999977666
Q ss_pred hHHhhcCC---------------------CCCCCCCCHHHHH-------H-------------HHHHHHHHHHHHHh--h
Q 005880 444 FWLLHGNR---------------------GPGRTPLDWTTRL-------K-------------IAAGAARGLAFIHF--T 480 (672)
Q Consensus 444 ~~~l~~~~---------------------~~~~~~l~~~~~~-------~-------------i~~~ia~~L~~LH~--~ 480 (672)
.+++.... ......++..... . ....+.+.++.+.. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 54443211 0001112221100 0 00111122233311 1
Q ss_pred CCCCCcEecCCCCCCEEeCCC----CcEEEeccCCCccC
Q 005880 481 CKSLKLTHGNIKSTNVLLDKT----GNARVSDFGLSIFA 515 (672)
Q Consensus 481 ~~~~~iiH~Dlkp~NIll~~~----~~~kl~DfG~a~~~ 515 (672)
.....++|||+.+.||+++.+ +.+.|+||+.+...
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 124579999999999999875 67999999987543
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.07 E-value=0.00057 Score=59.63 Aligned_cols=36 Identities=31% Similarity=0.278 Sum_probs=18.5
Q ss_pred CCCeEecccCccccccchhhcCCCccCeeeccCCcc
Q 005880 136 RLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRF 171 (672)
Q Consensus 136 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l 171 (672)
+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 455555555555533333445555555555555544
No 430
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.94 E-value=0.0017 Score=68.46 Aligned_cols=107 Identities=11% Similarity=0.080 Sum_probs=68.1
Q ss_pred CCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCe
Q 005880 84 LTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLT 163 (672)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 163 (672)
|.++..|+.+.+..+..+-.--.|.++++|+.+.+. +.++..-...|.++.+|+.++|..| ++..-...|.+|++|+.
T Consensus 261 F~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~ 338 (394)
T 4gt6_A 261 FDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLER 338 (394)
T ss_dssp TTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCE
T ss_pred eeecccccEEecccccceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCE
Confidence 667777888887665443111267777778877775 4455233345677778888887654 55333456777788888
Q ss_pred eeccCCcccC--cCCCCCCCCCCeeeccCCcC
Q 005880 164 LKLEANRFSG--PITGLDLRNLQDFNVSGNHL 193 (672)
Q Consensus 164 L~l~~N~l~~--~~~~~~l~~L~~l~l~~N~l 193 (672)
+.|..+ ++. .-.+.++.+|+.+++.+|..
T Consensus 339 i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 339 IAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp EEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred EEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 877544 432 33456777788887777643
No 431
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.93 E-value=0.0032 Score=65.71 Aligned_cols=143 Identities=17% Similarity=0.192 Sum_probs=83.0
Q ss_pred cccCcCCeEEEEEEEEc--------CCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCce-eeeEEEEEcCCeEEEEEe
Q 005880 366 EMLGKGGFGTAYKAVLD--------DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNL-VGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e 436 (672)
+.+..|-...+|+.... ++..+++|+.... ........+|.++++.+.-..+ .++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45666778889998864 2478999986432 2245566789988877742222 455655432 28999
Q ss_pred ecCCCChhH-----------------HhhcCCCC-CCCCC-CHHHHHHHHHHHHH-------------------HHHHHH
Q 005880 437 YMPNGSLFW-----------------LLHGNRGP-GRTPL-DWTTRLKIAAGAAR-------------------GLAFIH 478 (672)
Q Consensus 437 ~~~~g~L~~-----------------~l~~~~~~-~~~~l-~~~~~~~i~~~ia~-------------------~L~~LH 478 (672)
|++|.+|.. -||..... ++.+. -|.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 999865531 11222111 11222 25556655544422 233333
Q ss_pred h----hCCCCCcEecCCCCCCEEeCCC----CcEEEeccCCCc
Q 005880 479 F----TCKSLKLTHGNIKSTNVLLDKT----GNARVSDFGLSI 513 (672)
Q Consensus 479 ~----~~~~~~iiH~Dlkp~NIll~~~----~~~kl~DfG~a~ 513 (672)
. ......++|+|+.+.||+++++ +.+.++||..+.
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2 2223469999999999999876 789999998764
No 432
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.91 E-value=0.01 Score=55.86 Aligned_cols=103 Identities=12% Similarity=0.046 Sum_probs=67.7
Q ss_pred CChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCEEeCCCCcEEEeccCCCccCCCCCC
Q 005880 441 GSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV 520 (672)
Q Consensus 441 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 520 (672)
-+|.++|.... .+++++++|.++.|.+++|.-+-.. +.+ ..+=+.|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~~----~PlsEEqaWALc~Qc~~~L~~~~~~--~~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~------- 97 (229)
T 2yle_A 33 LSLEEILRLYN----QPINEEQAWAVCYQCCGSLRAAARR--RQP-RHRVRSAAQIRVWRDGAVTLAP-AADD------- 97 (229)
T ss_dssp EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT--TCC-CCCCCSGGGEEEETTSCEEECC-C----------
T ss_pred ccHHHHHHHcC----CCcCHHHHHHHHHHHHHHHHhhhhc--ccC-CceecCCcceEEecCCceeccc-cccc-------
Confidence 37899998654 6799999999999999998776211 111 1223456899999999988874 2111
Q ss_pred CCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCC
Q 005880 521 PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561 (672)
Q Consensus 521 ~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P 561 (672)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ~~~~~~~~pe~~~---~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 AGEPPPVAGKLGY---SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------CCSS---SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ccccCCCChhhcc---ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1233567899642 3567899999999999998875555
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.81 E-value=0.0019 Score=56.31 Aligned_cols=37 Identities=24% Similarity=0.237 Sum_probs=21.0
Q ss_pred ccceeeccccccCCCCChhhhccCCCCeEecccCccc
Q 005880 112 ALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFS 148 (672)
Q Consensus 112 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 148 (672)
+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3555566666665333344556666666666666553
No 434
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.79 E-value=0.0011 Score=69.23 Aligned_cols=73 Identities=11% Similarity=0.058 Sum_probs=42.6
Q ss_pred cccCcCCeEEEEEEEEcC---------CcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCc-eeeeEEEEEcCCeEEEEE
Q 005880 366 EMLGKGGFGTAYKAVLDD---------GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPN-LVGLKAYYFAREEKLLVS 435 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 435 (672)
+.++.|....+|+....+ +..+++|+...... ...+...|.++++.+...+ ..++++.. . .++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 457778888999998654 26788888754321 1112356777777664333 33555443 2 36899
Q ss_pred eecCCCCh
Q 005880 436 EYMPNGSL 443 (672)
Q Consensus 436 e~~~~g~L 443 (672)
||++|.++
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 435
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.58 E-value=0.0085 Score=64.16 Aligned_cols=73 Identities=11% Similarity=0.086 Sum_probs=46.0
Q ss_pred cccCcCCeEEEEEEEEcC-CcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCce-eeeEEEEEcCCeEEEEEeecCCCCh
Q 005880 366 EMLGKGGFGTAYKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNL-VGLKAYYFAREEKLLVSEYMPNGSL 443 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g~L 443 (672)
+.|+.|-...+|+....+ +..+++|+...... ..-+..+|..++..+...++ .++++++ . + .+||||+++-+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~-~-~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFF-T-N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEE-T-T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEe-C-C--eEEEEeeCCccC
Confidence 467888889999999775 47788988753221 11122578888877764444 4566665 2 2 259999987544
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.55 E-value=0.0088 Score=63.64 Aligned_cols=72 Identities=14% Similarity=0.176 Sum_probs=47.8
Q ss_pred cccCcCCeEEEEEEEEcC--------CcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCce-eeeEEEEEcCCeEEEEEe
Q 005880 366 EMLGKGGFGTAYKAVLDD--------GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNL-VGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e 436 (672)
+.|+.|....+|++...+ +..+++|+..... ....+.+|..++..+...++ .++++.+. + .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence 457788889999998753 5789999874321 12455578888877743333 45666542 2 38999
Q ss_pred ecCCCCh
Q 005880 437 YMPNGSL 443 (672)
Q Consensus 437 ~~~~g~L 443 (672)
|++|-+|
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986444
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.54 E-value=0.00042 Score=64.82 Aligned_cols=109 Identities=11% Similarity=0.145 Sum_probs=57.0
Q ss_pred CCCCCccEEEcccC-CCCCC-----CCCCCcccccceeeccccccCCC----CChhhhccCCCCeEecccCccccc----
Q 005880 85 TSLTQLRVLSLKYN-RFTGP-----VPSLSNLTALKLLFLSHNNFNGE----FPDSVSSLFRLYRLDLSFNNFSGQ---- 150 (672)
Q Consensus 85 ~~l~~L~~L~L~~N-~l~~~-----~p~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~---- 150 (672)
.+-+.|+.|+|++| +|... -..+..-+.|+.|+|++|+|... +-+.+..-+.|+.|+|++|+|+..
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 44456666666664 55421 01234445666677777666522 223334445677777777777632
Q ss_pred cchhhcCCCccCeeeccCCc---ccCc----CC--CCCCCCCCeeeccCCcC
Q 005880 151 IPLTVNHLTHLLTLKLEANR---FSGP----IT--GLDLRNLQDFNVSGNHL 193 (672)
Q Consensus 151 ~p~~~~~l~~L~~L~l~~N~---l~~~----~~--~~~l~~L~~l~l~~N~l 193 (672)
+-..+..-+.|+.|+|++|. +... +. ...-+.|+.|+++.|.+
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 22334445567777776542 2211 10 12345677777776654
No 438
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.41 E-value=0.0084 Score=61.62 Aligned_cols=32 Identities=22% Similarity=0.399 Sum_probs=27.9
Q ss_pred CCCcEecCCCCCCEEeCCCCcEEEeccCCCcc
Q 005880 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514 (672)
Q Consensus 483 ~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~~ 514 (672)
...++|+|+.+.||++++++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35699999999999999888899999987654
No 439
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.37 E-value=0.017 Score=60.29 Aligned_cols=101 Identities=16% Similarity=0.069 Sum_probs=44.2
Q ss_pred CCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCe
Q 005880 85 TSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLT 163 (672)
Q Consensus 85 ~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 163 (672)
.++..|+.+.+..+ ++.+-. .+.++.+|+.+.+..+ ++..-...|.++.+|+.+.+.+|.++..-...|.+|.+|+.
T Consensus 237 ~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~ 314 (379)
T 4h09_A 237 YGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSS 314 (379)
T ss_dssp TTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCE
T ss_pred cCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCE
Confidence 33444444444433 222222 3444555555555432 33122233445555555555555555222334555555555
Q ss_pred eeccCCcccC--cCCCCCCCCCCeeec
Q 005880 164 LKLEANRFSG--PITGLDLRNLQDFNV 188 (672)
Q Consensus 164 L~l~~N~l~~--~~~~~~l~~L~~l~l 188 (672)
+.|..| ++. .-.+.++.+|+.+.+
T Consensus 315 i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 315 VTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred EEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 555433 321 223344455555433
No 440
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.17 E-value=0.015 Score=61.11 Aligned_cols=120 Identities=13% Similarity=0.041 Sum_probs=60.3
Q ss_pred cEeEEEecCCCcccCCC-CCCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEeccc
Q 005880 66 RVSHLVLENLQLSGSLQ-PLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSF 144 (672)
Q Consensus 66 ~v~~L~l~~~~l~~~~~-~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 144 (672)
.++.+.+.+.. +.... .+..+..|+.+.+..|..+-....+.++..|+.+.+..+.+. ...|..+.+|+.+.+..
T Consensus 231 ~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~ 306 (394)
T 4fs7_A 231 GVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLD 306 (394)
T ss_dssp CCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECT
T ss_pred CCceEEECCCc-eecccccccccccceeEEcCCCcceeeccccccccccceeccCceeec---ccccccccccccccccc
Confidence 45666665432 22222 266677777777776644322225555566666555554322 13345555566665544
Q ss_pred CccccccchhhcCCCccCeeeccCCcccC--cCCCCCCCCCCeeeccCC
Q 005880 145 NNFSGQIPLTVNHLTHLLTLKLEANRFSG--PITGLDLRNLQDFNVSGN 191 (672)
Q Consensus 145 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~l~~L~~l~l~~N 191 (672)
| ++..-...|.++++|+.++|.++ ++. .-.+.++.+|+.+++..|
T Consensus 307 ~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 307 S-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred c-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 3 44222334555666666665433 332 233445555666655544
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.01 E-value=0.003 Score=58.98 Aligned_cols=85 Identities=13% Similarity=0.182 Sum_probs=61.7
Q ss_pred Ccccccceeecccc-ccCC----CCChhhhccCCCCeEecccCccccc----cchhhcCCCccCeeeccCCcccCc--C-
Q 005880 108 SNLTALKLLFLSHN-NFNG----EFPDSVSSLFRLYRLDLSFNNFSGQ----IPLTVNHLTHLLTLKLEANRFSGP--I- 175 (672)
Q Consensus 108 ~~l~~L~~L~l~~N-~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~--~- 175 (672)
.+-+.|+.|+|++| +|.. .+-+.+..-+.|+.|+|++|+|... +-..+..-+.|+.|+|++|+|... .
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 45578999999986 7653 1334456667899999999999733 334555678899999999999751 1
Q ss_pred ---CCCCCCCCCeeeccCCc
Q 005880 176 ---TGLDLRNLQDFNVSGNH 192 (672)
Q Consensus 176 ---~~~~l~~L~~l~l~~N~ 192 (672)
....-+.|+.|+|++|.
T Consensus 118 la~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHhhCCceeEEECCCCc
Confidence 13345679999998763
No 442
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.00 E-value=0.016 Score=60.93 Aligned_cols=97 Identities=8% Similarity=0.092 Sum_probs=69.1
Q ss_pred CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCeeeccCCcccC--cCCCCCCCCC
Q 005880 106 SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLTLKLEANRFSG--PITGLDLRNL 183 (672)
Q Consensus 106 ~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~l~~L 183 (672)
.|.++.+|+.+.+.++..+ .-...|.++.+|+.+.+. +.++..-...|.++.+|+.+.|..| ++. .-.+..+.+|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 6788899999998876554 445678888999999996 5566344457888999999999765 443 4456788999
Q ss_pred CeeeccCCcCCCCCC-CcCCCCCCc
Q 005880 184 QDFNVSGNHLSGQIP-KSLSGFPDS 207 (672)
Q Consensus 184 ~~l~l~~N~l~g~~p-~~l~~~~~~ 207 (672)
+.+.+..+ ++ .|. ..|.++..|
T Consensus 337 ~~i~ip~s-v~-~I~~~aF~~C~~L 359 (394)
T 4gt6_A 337 ERIAIPSS-VT-KIPESAFSNCTAL 359 (394)
T ss_dssp CEEEECTT-CC-BCCGGGGTTCTTC
T ss_pred CEEEECcc-cC-EEhHhHhhCCCCC
Confidence 99988654 55 554 345544433
No 443
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.40 E-value=0.092 Score=54.94 Aligned_cols=101 Identities=11% Similarity=0.031 Sum_probs=43.1
Q ss_pred CCCCCCccEEEcccCCCCCCCCCCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccCe
Q 005880 84 LTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLLT 163 (672)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 163 (672)
+..+..|+.+.+..+.+.. ..+..+.+|+.+.+.++ ++..-...|.++.+|+.++|.++ ++..-...|.+|++|+.
T Consensus 272 F~~~~~l~~~~~~~~~i~~--~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~ 347 (394)
T 4fs7_A 272 FYNCSGLKKVIYGSVIVPE--KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSN 347 (394)
T ss_dssp TTTCTTCCEEEECSSEECT--TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCE
T ss_pred cccccccceeccCceeecc--ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCE
Confidence 4444455554444332110 13444555555555433 33122233445555555555432 43222334555555555
Q ss_pred eeccCCcccC--cCCCCCCCCCCeeecc
Q 005880 164 LKLEANRFSG--PITGLDLRNLQDFNVS 189 (672)
Q Consensus 164 L~l~~N~l~~--~~~~~~l~~L~~l~l~ 189 (672)
+.+..| ++. .-.+.++.+|+.+++.
T Consensus 348 i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 348 INFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp ECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred EEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 555443 322 2233444555555443
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.28 E-value=0.069 Score=55.81 Aligned_cols=144 Identities=17% Similarity=0.164 Sum_probs=80.7
Q ss_pred cccCcCCeEEEEEEEEcC--------CcEEEEEEcccCCc-----------chH-------HHHHHHHHHHcCCCCCc-e
Q 005880 366 EMLGKGGFGTAYKAVLDD--------GSVVAVKRLKDASI-----------GGK-------REFEQHMEVLGRLRHPN-L 418 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~-----------~~~-------~~~~~e~~~l~~l~h~n-i 418 (672)
+.|..|-...+|++...+ +..|.+++.-.... -++ +....|.++++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 346667788899988653 36788887643211 011 12234788877774333 3
Q ss_pred eeeEEEEEcCCeEEEEEeecCCCChhH--H---------------hhcCCCCCCCCCC--HHHHHHHHHHHH--------
Q 005880 419 VGLKAYYFAREEKLLVSEYMPNGSLFW--L---------------LHGNRGPGRTPLD--WTTRLKIAAGAA-------- 471 (672)
Q Consensus 419 v~l~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~~~~~~~l~--~~~~~~i~~~ia-------- 471 (672)
.++++++. ++ +|+||+++-+|.. + +|........... |..+.++..++.
T Consensus 138 Pkl~~~~~-~G---~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFP-QG---RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEET-TE---EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeC-CC---eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 45666653 22 8999998755421 1 1222111111222 334444443321
Q ss_pred --------------HHHH----HHHhhCCCCCcEecCCCCCCEEeCCC------CcEEEeccCCCc
Q 005880 472 --------------RGLA----FIHFTCKSLKLTHGNIKSTNVLLDKT------GNARVSDFGLSI 513 (672)
Q Consensus 472 --------------~~L~----~LH~~~~~~~iiH~Dlkp~NIll~~~------~~~kl~DfG~a~ 513 (672)
+-+. +|........++|+|+.+.||+++++ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 23322234568999999999999877 789999998653
No 445
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.13 E-value=0.13 Score=53.40 Aligned_cols=107 Identities=12% Similarity=0.100 Sum_probs=76.9
Q ss_pred CCCCCCccEEEcccCCCCCCCC-CCCcccccceeeccccccCCCCChhhhccCCCCeEecccCccccccchhhcCCCccC
Q 005880 84 LTSLTQLRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPLTVNHLTHLL 162 (672)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~ 162 (672)
+....+|+.+.+..+ ++.... .+.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++++|+
T Consensus 213 f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~ 289 (379)
T 4h09_A 213 FSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLT 289 (379)
T ss_dssp TTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCC
T ss_pred cccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccc
Confidence 556677888887655 332223 6788889999998776 55344566778889999998654 5533345788899999
Q ss_pred eeeccCCcccC--cCCCCCCCCCCeeeccCCcCC
Q 005880 163 TLKLEANRFSG--PITGLDLRNLQDFNVSGNHLS 194 (672)
Q Consensus 163 ~L~l~~N~l~~--~~~~~~l~~L~~l~l~~N~l~ 194 (672)
.+.+.+|.++. .-.+.++.+|+.+.|.+| ++
T Consensus 290 ~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~ 322 (379)
T 4h09_A 290 KVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK 322 (379)
T ss_dssp EEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC
T ss_pred cccccccccceehhhhhcCCCCCCEEEcCcc-cc
Confidence 99998888764 455678889999988644 44
No 446
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=94.77 E-value=0.015 Score=37.96 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=22.4
Q ss_pred CcccceeeeehhhHHHHHHHHHHHHHHhhhee
Q 005880 279 SKISSVAVIAIVVGDFLVLAIISLLLYCYFWR 310 (672)
Q Consensus 279 ~~~~~~~ii~ivvg~~~~l~ii~~l~~~~~~r 310 (672)
+..+...+.++++|+++.+++++.+++++++|
T Consensus 6 ~~ls~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 6 RGLTGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 34556778889999888777776666655444
No 447
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.47 E-value=0.074 Score=56.15 Aligned_cols=142 Identities=15% Similarity=0.159 Sum_probs=83.2
Q ss_pred cccCcCCeEEEEEEEEcC--------CcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCc-eeeeEEEEEcCCeEEEEEe
Q 005880 366 EMLGKGGFGTAYKAVLDD--------GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPN-LVGLKAYYFAREEKLLVSE 436 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e 436 (672)
+.+..|-...+|+....+ +..+++|+...... ..-+..+|.++++.+...+ ..++++.+ . .++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEE
Confidence 456677888999998763 57888988654321 1123356777776664222 33455432 2 378999
Q ss_pred ecCCCChhH--H---------------hhcCC------CC--CCCCCCHHHHHHHHHHH-------------------HH
Q 005880 437 YMPNGSLFW--L---------------LHGNR------GP--GRTPLDWTTRLKIAAGA-------------------AR 472 (672)
Q Consensus 437 ~~~~g~L~~--~---------------l~~~~------~~--~~~~l~~~~~~~i~~~i-------------------a~ 472 (672)
|++|.+|.. + ||... .. +..+.-|.++.++..++ .+
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 999865421 0 11100 00 12233455555554332 22
Q ss_pred HHHHHHhh--------------------CCCCCcEecCCCCCCEEeCCCCcEEEeccCCCc
Q 005880 473 GLAFIHFT--------------------CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI 513 (672)
Q Consensus 473 ~L~~LH~~--------------------~~~~~iiH~Dlkp~NIll~~~~~~kl~DfG~a~ 513 (672)
.+.+|... .....++|+|+.+.||+ ++++.+.++||..+.
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~ 290 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSA 290 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCC
Confidence 33444321 11345899999999999 788899999998774
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=94.21 E-value=0.024 Score=38.16 Aligned_cols=29 Identities=21% Similarity=0.390 Sum_probs=14.2
Q ss_pred eeehhhHHHHHHHHHHHHHHhhheecccc
Q 005880 286 VIAIVVGDFLVLAIISLLLYCYFWRNYVK 314 (672)
Q Consensus 286 ii~ivvg~~~~l~ii~~l~~~~~~rr~~~ 314 (672)
|++.++|.++++++++++++++++||+.+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 34445554554555555555555554443
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=93.90 E-value=0.025 Score=37.94 Aligned_cols=30 Identities=30% Similarity=0.574 Sum_probs=14.4
Q ss_pred eeehhhHHHHHHHHHHHHHHhhheeccccc
Q 005880 286 VIAIVVGDFLVLAIISLLLYCYFWRNYVKN 315 (672)
Q Consensus 286 ii~ivvg~~~~l~ii~~l~~~~~~rr~~~~ 315 (672)
+++.++|.++++++++.+++++++||+.++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 444445544445455555555555444443
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=91.92 E-value=0.064 Score=35.93 Aligned_cols=30 Identities=23% Similarity=0.413 Sum_probs=14.5
Q ss_pred eeeehhhHHHHHHHHHHHHHHhhheeccccc
Q 005880 285 AVIAIVVGDFLVLAIISLLLYCYFWRNYVKN 315 (672)
Q Consensus 285 ~ii~ivvg~~~~l~ii~~l~~~~~~rr~~~~ 315 (672)
.++++++| +++++++.++++++.+||+.++
T Consensus 13 ~Ia~~vVG-vll~vi~~l~~~~~~RRR~~~~ 42 (44)
T 2jwa_A 13 SIISAVVG-ILLVVVLGVVFGILIKRRQQKI 42 (44)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHCSCC
T ss_pred chHHHHHH-HHHHHHHHHHHHhheehhhhhc
Confidence 35566666 3334444444444555554443
No 451
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.40 E-value=0.44 Score=49.85 Aligned_cols=29 Identities=24% Similarity=0.378 Sum_probs=24.3
Q ss_pred CcEecCCCCCCEEe------CCCCcEEEeccCCCc
Q 005880 485 KLTHGNIKSTNVLL------DKTGNARVSDFGLSI 513 (672)
Q Consensus 485 ~iiH~Dlkp~NIll------~~~~~~kl~DfG~a~ 513 (672)
.++|+|+.+.||++ +++..++++||..|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 36799999999999 456779999998764
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=85.80 E-value=3.9 Score=38.38 Aligned_cols=114 Identities=11% Similarity=0.086 Sum_probs=79.2
Q ss_pred CCCceeeeEEEEEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHH-HHHhhCCCCCcEecCCC
Q 005880 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLA-FIHFTCKSLKLTHGNIK 492 (672)
Q Consensus 414 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~-~LH~~~~~~~iiH~Dlk 492 (672)
.||++ -...-.+++...+.|+.-+++.=...++ ..+...+++++.+++.... +++ .-+|--|.
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~------~r~tf~l~ 111 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSA------RRLIFIVC 111 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCS------SSEECCCC
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhh------CceeEEEe
Confidence 68888 3444466777777777664443344443 2678899999998887665 443 45777899
Q ss_pred CCCEEeCCCCcEEEeccCCCccCCCCCCCCCCcccCCCccccCCCCCCchhHHH-HHHHHHHHHHhCCCCCC
Q 005880 493 STNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDGRKQSQKSDVY-SFGVLLLELLTGKCPSV 563 (672)
Q Consensus 493 p~NIll~~~~~~kl~DfG~a~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~~DV~-S~Gvvl~el~tg~~P~~ 563 (672)
|+||++|.++.+++.-.|+- +-++|.- .+ ..|.| .+=+++..++.++..|+
T Consensus 112 P~NL~f~~~~~p~i~hRGi~------------~~lpP~e-------~~-ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 112 PENLMFNRALEPFFLHVGVK------------ESLPPDE-------WD-DERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGGEEECTTCCEEESCCEET------------TTBSSCS-------CC-HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred CceEEEeCCCcEEEEEcCCc------------ccCCCCC-------CC-HHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999999987753 2344551 12 23443 67788899999888874
No 453
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=85.36 E-value=3 Score=38.98 Aligned_cols=117 Identities=10% Similarity=0.042 Sum_probs=79.9
Q ss_pred CCCCceeeeEEEEEcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCC
Q 005880 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIK 492 (672)
Q Consensus 413 l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~iiH~Dlk 492 (672)
..||+++.. .+-.+++...+.|+.-+++.=+..+ ...+...+++++..|+....+++ .-+|--|.
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~i--------k~~~~~eKlr~l~ni~~l~~~~~------~r~tf~L~ 106 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNI--------KSFTKNEKLRYLLNIKNLEEVNR------TRYTFVLA 106 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGG--------GGSCHHHHHHHHHHGGGGGGGGG------SSEECCCS
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHH--------HhcCHHHHHHHHHHHHHHHHHhc------CceEEEEe
Confidence 368888876 4556666666666654432212223 23778999999999998876665 34677899
Q ss_pred CCCEEeCCCCcEEEeccCCCccCCCCCCCCCCcccCCCccccCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 005880 493 STNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSV 563 (672)
Q Consensus 493 p~NIll~~~~~~kl~DfG~a~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~~DV~S~Gvvl~el~tg~~P~~ 563 (672)
|+||+++.++.+++.-.|+-.. ++|. ..++..=.-.+=+++..+++++..|+
T Consensus 107 P~NL~f~~~~~p~i~~RGik~~------------l~P~-------~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 107 PDELFFTRDGLPIAKTRGLQNV------------VDPL-------PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GGGEEECTTSCEEESCCEETTT------------BSCC-------CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred cceEEEcCCCCEEEEEccCccC------------CCCC-------CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999999987775321 2333 11222223467789999999998885
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=75.24 E-value=0.25 Score=52.83 Aligned_cols=58 Identities=9% Similarity=0.085 Sum_probs=16.7
Q ss_pred cccCcCCeEEEEEEEEcC-CcEEEE------EEcccCCc--chHHHHHHHHHHHcCCCCCceeeeEEEEE
Q 005880 366 EMLGKGGFGTAYKAVLDD-GSVVAV------KRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAYYF 426 (672)
Q Consensus 366 ~~lg~G~~g~Vy~~~~~~-g~~vav------K~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 426 (672)
+.|| ||.||+|.+.. ..+||| |..+.... +....|.+|..++..++|||+++.+++..
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 4565 99999999764 467888 77664332 23356888899999999999999988765
No 455
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=55.28 E-value=5.5 Score=24.85 Aligned_cols=25 Identities=36% Similarity=0.626 Sum_probs=16.4
Q ss_pred cceeeeehhhHHHHHHHHHHHHHHh
Q 005880 282 SSVAVIAIVVGDFLVLAIISLLLYC 306 (672)
Q Consensus 282 ~~~~ii~ivvg~~~~l~ii~~l~~~ 306 (672)
+...+.+|++|.+++.+++++++|+
T Consensus 5 ~~gaIaGIVvgdi~~t~~i~~~vy~ 29 (33)
T 2l34_A 5 SPGVLAGIVVGDLVLTVLIALAVYF 29 (33)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEeEeHHHHHHHHHHHHHHhh
Confidence 3456677888877777666555554
No 456
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=52.95 E-value=9.8 Score=25.49 Aligned_cols=32 Identities=9% Similarity=-0.020 Sum_probs=23.2
Q ss_pred eeehhhHHHHHHHHHHHHHHhhheeccccccc
Q 005880 286 VIAIVVGDFLVLAIISLLLYCYFWRNYVKNKT 317 (672)
Q Consensus 286 ii~ivvg~~~~l~ii~~l~~~~~~rr~~~~~~ 317 (672)
..+|+.|++..++++++++...+...++++.+
T Consensus 10 ~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 10 IPSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 47777777777888888777777777666654
No 457
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=50.47 E-value=11 Score=25.25 Aligned_cols=33 Identities=15% Similarity=0.021 Sum_probs=22.7
Q ss_pred eeehhhHHHHHHHHHHHHHHhhheecccccccc
Q 005880 286 VIAIVVGDFLVLAIISLLLYCYFWRNYVKNKTR 318 (672)
Q Consensus 286 ii~ivvg~~~~l~ii~~l~~~~~~rr~~~~~~~ 318 (672)
..+|+.|++..++++++++...+...++++..+
T Consensus 9 ~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 9 TPLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred cceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 356666666667777777777777777766654
No 458
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=40.41 E-value=12 Score=26.26 Aligned_cols=30 Identities=20% Similarity=0.368 Sum_probs=14.3
Q ss_pred eehhhHHHHHHHHHHHHHHhhheecccccc
Q 005880 287 IAIVVGDFLVLAIISLLLYCYFWRNYVKNK 316 (672)
Q Consensus 287 i~ivvg~~~~l~ii~~l~~~~~~rr~~~~~ 316 (672)
..|++++++.+++++++++..+.....|++
T Consensus 10 WiIi~svl~GLLLL~Lii~~LwK~GFFKR~ 39 (54)
T 2l8s_A 10 WVILLSAFAGLLLLMLLILALWKIGFFKRP 39 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcccCC
Confidence 345556665555555444444333333333
No 459
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=39.01 E-value=1.7e+02 Score=29.16 Aligned_cols=134 Identities=17% Similarity=0.136 Sum_probs=70.1
Q ss_pred cCcCCeEEEEEEEEcCCcEEEEEEcccCCcchHHHHHHHHHHHcCCCCCceeeeEEEE----------------------
Q 005880 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYY---------------------- 425 (672)
Q Consensus 368 lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~---------------------- 425 (672)
...|. +.||.+.. ++..|+||-.. .. ..+-+-.++...-.+.-|+.--+. +.
T Consensus 77 s~~Gs-tgvff~~t-d~~~~VVK~s~--~l-~~E~l~s~LA~~LGlpiP~~Riv~-~~~~E~~e~~~~L~~~~~~~~~l~ 150 (342)
T 1cja_A 77 SEKGT-EGLFFVET-ESGVFIVKRST--NI-ESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDKSFRVIT 150 (342)
T ss_dssp CCSTT-SCEEEEEE-SSCEEEEECCT--TH-HHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCSSSCHHH
T ss_pred ccCCC-CCeEEEEe-CCCEEEEeCcH--HH-HHHHHHHHHHHHhCCCCCCeeEEe-eCcHHHHHHHHHHHHhhhhhHHHH
Confidence 34454 45555555 47788999542 11 334444444444445555422111 10
Q ss_pred -EcCCeEEEEEeecCCCChhHHhhcCCCCCCCCCCHHHHHHHHHHH--HHHHHHHHhhCCCCCcEe-cCCCCCCEEeCCC
Q 005880 426 -FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGA--ARGLAFIHFTCKSLKLTH-GNIKSTNVLLDKT 501 (672)
Q Consensus 426 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i--a~~L~~LH~~~~~~~iiH-~Dlkp~NIll~~~ 501 (672)
......+++|||.+|..|.+.-+... ...+.. +.+.++ +-++..+.....+.+.+. .--.+.|||++++
T Consensus 151 ~l~~~~~~l~meyv~G~~L~e~~~~~~---~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 151 TLANQANILLMELVRGITLNKLTTTSA---PEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp HHTTCSEEEEEECCCEEESTTCCSSSH---HHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred HhhcccceehhhhcCCCccccchhhhh---hhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 01224669999998766543321100 001222 222222 345666665555554433 2257899999875
Q ss_pred Cc-EEEeccCCCcc
Q 005880 502 GN-ARVSDFGLSIF 514 (672)
Q Consensus 502 ~~-~kl~DfG~a~~ 514 (672)
+. +.++|-+.+..
T Consensus 224 n~~~~~IDhn~af~ 237 (342)
T 1cja_A 224 GATVVPIDSKIIPL 237 (342)
T ss_dssp TTCEEECSCCCCCC
T ss_pred CCeEEEEcCCcccc
Confidence 54 89999998854
No 460
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=34.56 E-value=16 Score=25.65 Aligned_cols=29 Identities=10% Similarity=0.251 Sum_probs=13.0
Q ss_pred ceeeeehhhHHHHHHHHHHHHHHhhheec
Q 005880 283 SVAVIAIVVGDFLVLAIISLLLYCYFWRN 311 (672)
Q Consensus 283 ~~~ii~ivvg~~~~l~ii~~l~~~~~~rr 311 (672)
++++++++.|.++..+++.++..|-+.+|
T Consensus 13 wiIi~svl~GLllL~li~~~LwK~GFFkR 41 (54)
T 2knc_A 13 WWVLVGVLGGLLLLTILVLAMWKVGFFKR 41 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcccC
Confidence 33444445454444444444444444443
No 461
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=32.55 E-value=38 Score=24.56 Aligned_cols=11 Identities=36% Similarity=0.519 Sum_probs=4.9
Q ss_pred hhhHHHHHHHH
Q 005880 289 IVVGDFLVLAI 299 (672)
Q Consensus 289 ivvg~~~~l~i 299 (672)
|++|.++.+++
T Consensus 12 ivlGg~~~lll 22 (70)
T 2klu_A 12 IVLGGVAGLLL 22 (70)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHhHHHHHHH
Confidence 44454444433
No 462
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=28.18 E-value=13 Score=19.95 Aligned_cols=9 Identities=44% Similarity=1.357 Sum_probs=7.1
Q ss_pred CCCcccceE
Q 005880 53 DPCSWTGVS 61 (672)
Q Consensus 53 ~~c~w~gv~ 61 (672)
..|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 479999964
No 463
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=22.17 E-value=1.8e+02 Score=22.94 Aligned_cols=13 Identities=8% Similarity=0.217 Sum_probs=5.3
Q ss_pred CCcccccceeecc
Q 005880 107 LSNLTALKLLFLS 119 (672)
Q Consensus 107 ~~~l~~L~~L~l~ 119 (672)
|.++++|+.+.|.
T Consensus 16 F~~c~~L~~i~iP 28 (100)
T 2lz0_A 16 FAGNTVIREITVQ 28 (100)
T ss_dssp TTTCTTCCCEEEC
T ss_pred hcCCCCCcEEEcC
Confidence 3344444444433
Done!