BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005881
(672 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/666 (37%), Positives = 390/666 (58%), Gaps = 6/666 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ S HP++ NH+L MY K + DAQK+FD MPERNV+SW+++I+G+SQ G A
Sbjct: 89 MLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNA 148
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV--SNCLI 118
L ++ M+ + P+ +T+ + AC+S GD G+++H + +S E +H+ N LI
Sbjct: 149 LEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKS--EFGAHIIAQNALI 206
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI-SE 177
+MY K L+ A VF R+ ISW S+++ + Q G + L F GV + +E
Sbjct: 207 SMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNE 266
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
F SV AC+ L + G Q+H + K L D F L ++YAKC L A VF
Sbjct: 267 FIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQ 326
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
I PDL AW+A+I G+A G A EAI F +M GL+P E+T +L A E G
Sbjct: 327 IGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQG 386
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLA 356
Q+H I KMG V NT+L Y+KC L +++ F+EM D+VSWNA++ +
Sbjct: 387 MQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMR 446
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
E LLK M H P+ T +N+L S++ +IE G Q HC +K G + + +
Sbjct: 447 HDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSV 506
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ L+D+YAKCG L A K+FD + + ++VSW+++++GYAQ G G EAL+++ M+ +
Sbjct: 507 TNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDV 566
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KPN TF+GVL+AC H+GLVEEGW + +M ++ GI+P +H + +V L A G A
Sbjct: 567 KPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAE 626
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
FI +P+ VVW+ LL+ CKTH ++ +G+ AAE IL DP +++AH++L N+YA
Sbjct: 627 GFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKG 686
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W++ A++R +MK++ ++K G SW E+++++H F + ++ ++ +L + +
Sbjct: 687 NWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYTMLEELLLQML 746
Query: 657 DGGYVP 662
D GYVP
Sbjct: 747 DAGYVP 752
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 154/482 (31%), Positives = 243/482 (50%), Gaps = 4/482 (0%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TY +SAC+ GK+IH M +S + + N ++NMYGKC L AQ VFDA
Sbjct: 65 TYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAM 124
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
ERN +SW S+++ Y Q G+ + L+ + +SGV +F+ S++ AC+ LG++ +G
Sbjct: 125 PERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+H+ V K LI++Y K + A VFS + DL +W ++I G++QLG
Sbjct: 185 QLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLG 244
Query: 258 KACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
EA+ F +M G+ +P+E F V A + + + GRQLH + IK G F
Sbjct: 245 YELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAG 304
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
++ D Y+KC LL + F ++ D+V+WNA+IAG EAI M +G
Sbjct: 305 CSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLI 364
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ T ++L + + G Q H I K G D +V + + L+ MYAKC L DA
Sbjct: 365 PDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFF 424
Query: 437 FDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
F+ + + +LVSWN +L +H E + +M ++ +P+ T VL A
Sbjct: 425 FEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVS 484
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+E G ++ G++ ++ L+A G + A++ I S I P+ V W L+
Sbjct: 485 IEIGNQVHCYALKT-GLNCDTSVTNGLIDLYAKCGSLKTAHK-IFDSMINPDVVSWSSLI 542
Query: 556 SG 557
G
Sbjct: 543 LG 544
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 221/418 (52%), Gaps = 9/418 (2%)
Query: 149 LSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
++S C+ +K F L +K+G ++ + A ++ AC+ L +L+ G +IH + K
Sbjct: 34 ITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSK 93
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
D + ++N+Y KC+ L A +VF + ++ +W+++I GY+Q G+ A++ +
Sbjct: 94 SHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYF 153
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
+M SG+MP + TF ++ A + + + GRQLH+ ++K F + N ++ Y+K
Sbjct: 154 QMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSN 213
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG-HCPNLYTYSNIL 386
L+ ++L F M D++SW ++IAG + EA+ K+ML +G + PN + + ++
Sbjct: 214 LIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVF 273
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+ S + E+G+Q H +K G +V G +L DMYAKCG L+ AR VF + +LV
Sbjct: 274 SACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLV 333
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH---YF 503
+WN ++ G+A G +EA+ +S M+ + P++ T +L AC + +G Y
Sbjct: 334 AWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYI 393
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
N M G+ + +++ ++A + R A F + + V W +L+ C H
Sbjct: 394 NKM----GLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRH 447
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/670 (35%), Positives = 395/670 (58%), Gaps = 6/670 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF +V L+ MY+K + D +++FDEM +NV+SW++L++G+ Q G+ E AL
Sbjct: 119 IKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQAL 178
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M ++PN +T+ + A+ G G ++H + +SGL+ V N ++NMY
Sbjct: 179 KLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMY 238
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K ++S A+ VFD+ RN++SW S+++ + G + ++F R GV +++ A
Sbjct: 239 SKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFA 298
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-L 240
+V+ CA + + Q+H V K +FD + L+ Y+KC ++D A ++F + +
Sbjct: 299 TVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGV 358
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+A+I GY Q G+ A++LF +M G+ P+ T+S +L A A V + Q+
Sbjct: 359 QNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPS----QI 414
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+L++K + + V + D YSK E+ K F+ +DE D+V+W+A+++G+
Sbjct: 415 HALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDI 474
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNI-SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
A+++ + EG PN +T+S++LN ++ ++E GKQ H C +K GF + + + SA
Sbjct: 475 EGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSA 534
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LV MYAK G + A +VF ++LVSWN+M+ GYAQHG G+++L+I+ M+ ++ +
Sbjct: 535 LVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELD 594
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TFIGV+SAC H GLV EG YF+ M++D+ I P M+H + +V L++ G +A + I
Sbjct: 595 GITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLI 654
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
P +WR LL+ C+ H ++ LG AAEK++S P+D++A+++LSN+YA A W
Sbjct: 655 NKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQ 714
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
E AKVRK+M K +KK+ G SW E++NK F + Q ++ + +LS+ L D G
Sbjct: 715 ERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAG 774
Query: 660 YVPDPIYSSH 669
Y PD Y H
Sbjct: 775 YYPDTKYVLH 784
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 161/535 (30%), Positives = 283/535 (52%), Gaps = 8/535 (1%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
+Q+LFDE P++ + + L+ FS+ + ALN F + + + + C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
D GK++H + + G + V L++MY K + + VFD +N +SW SL
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
L+ Y Q G + LK+F + G+ + F+ A+VLG A G ++ G+Q+H++V K L
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+ FV ++N+Y+K + A VF +++ + +W+++I G+ G EA +LF +
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M G+ ++ F+ V+ A++KE +QLH +IK G + ++ YSKC
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344
Query: 329 LEESLKTFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
++++ K F M +VVSW A+I+G++ + A+ L M EG PN +TYS IL
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT 404
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
++ + Q H +VK ++++ +G+AL D Y+K G N+A K+F+ + K++V+
Sbjct: 405 ANAAVSP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVA 460
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH-IGLVEEGWHYFNSM 506
W+ ML GYAQ G A++I+ + + ++PN+ TF VL+AC VE+G + +
Sbjct: 461 WSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCS 520
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
I+ G S + +++V ++A RG A E K ++ + V W ++SG H
Sbjct: 521 IKS-GFSNALCVSSALVTMYAKRGNIESANEVFKRQ-VDRDLVSWNSMISGYAQH 573
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 225/443 (50%), Gaps = 21/443 (4%)
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
+Q +FD + ++ LL + + ++ L +FL R+SG S + VL C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
L + VG Q+H KC D V L+++Y K E ++ RVF +++ ++ +W++L
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
+ GY Q G +A+ LF +M G+ P+ TF+ VLG A G Q+H+++IK G
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
S FV N++++ YSK ++ ++ FD M+ + VSWN++IAG + + EA EL
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M EG ++ ++ + ++I + + KQ HC ++K G D ++ I +AL+ Y+KC
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344
Query: 430 LNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
++DA K+F + +N+VSW ++ GY Q+G A+ ++ M+ ++PN T+ +L+
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT 404
Query: 489 AC-------VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
A +H +V+ +Y NS +S I + + +E I
Sbjct: 405 ANAAVSPSQIHALVVKT--NYENSPSVGTALSDSYSKIGDA-------NEAAKIFELID- 454
Query: 542 SPIEPNKVVWRCLLSGCKTHKDL 564
E + V W +LSG D+
Sbjct: 455 ---EKDIVAWSAMLSGYAQMGDI 474
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 235/465 (50%), Gaps = 14/465 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + N ++ MY K ++DA+ +FD M RN +SW+++I+GF G+ A
Sbjct: 219 VIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEA 278
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M ++ + + CA+ + K++H ++ ++G + + ++ L+
Sbjct: 279 FELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVA 338
Query: 121 YGKCGLLSSAQFVF-DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KC + A +F +N +SW +++S Y Q G + +F R+ GV + F+
Sbjct: 339 YSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFT 398
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+++L A A + QIH+LV K E V L + Y+K + A+++F I
Sbjct: 399 YSTILTANAAVS----PSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELID 454
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI-GGR 298
D+ AWSA++ GYAQ+G A+ +F+++ G+ P+E TFS VL A A ++ G+
Sbjct: 455 EKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGK 514
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q HS IK GFS+ V++ ++ Y+K +E + + F + D+VSWN++I+G+
Sbjct: 515 QFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHG 574
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG- 417
+++++ ++M + + T+ +++ + + G++ +VK D ++V
Sbjct: 575 CGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVK---DYHIVPTM 631
Query: 418 ---SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
S +VD+Y++ G L A + + + W T+L H
Sbjct: 632 EHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 676
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/655 (36%), Positives = 385/655 (58%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
NV L+ +Y K +++A +F +P R ++W+ +I+G++QIG VAL F M
Sbjct: 154 NVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMG 213
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ P+ + AVSAC++ G G++IHG YRS E ++ V N LI++Y KC LS
Sbjct: 214 IEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLS 273
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+A+ +FD RN +SW +++S Y Q + + +F ++G F+C S+L +C
Sbjct: 274 AARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCG 333
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L + G QIH+ V K LE D++V LI++YAKCE L A VF + D +++A
Sbjct: 334 SLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNA 393
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I GY++ EA+++F +M L PS +TF +LG + +Q+H LIIK G
Sbjct: 394 MIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSG 453
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
S + A+ ++D YSKC L+ ++ F+ + D+V WN++I GH + EAI+L
Sbjct: 454 TSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFN 513
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+L G PN +T+ ++ ++S + ++ G+Q H I+K G D++ + +AL+DMYAKCG
Sbjct: 514 QLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCG 573
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ + R +F+ ++++ WN+M+ YAQHG EAL+++ +M E +++PN TF+GVLS
Sbjct: 574 FIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLS 633
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H G V EG ++FNSM ++ I P ++H ASVV+LF G+ A EFI+ PI+P
Sbjct: 634 ACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAA 693
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
VWR LLS C + +GRYAAE L DP D+ +++LSN+YA +W + +R+ M
Sbjct: 694 AVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQM 753
Query: 609 KEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
K+TGCSW E+ ++H F + ++ V+++L+ + + GYVPD
Sbjct: 754 DSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIKNLGYVPD 808
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/579 (30%), Positives = 295/579 (50%), Gaps = 34/579 (5%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL Y R+ DA+ LFD MP RN++SW ++IS ++Q G + A++ F E
Sbjct: 57 NLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCE 116
Query: 74 -PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
PN + + AC G+++HG + L+ N +V LIN+Y K G + A
Sbjct: 117 VPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAML 176
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VF A R ++W ++++ Y Q G L++F GV F AS + AC+ LG
Sbjct: 177 VFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGF 236
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L+ G QIH ++ A E D V LI+LY KC +L A ++F ++ +L +W+ +I G
Sbjct: 237 LEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISG 296
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y Q EAI +F M +G P + +L + + GRQ+H+ +IK +
Sbjct: 297 YMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEAD 356
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+V N ++D Y+KCE L E+ FD + E D +S+NA+I G+ + EA+ + + M F
Sbjct: 357 EYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRF 416
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
P+L T+ ++L +SS AIE KQ H I+K G ++ SAL+D+Y+KC +ND
Sbjct: 417 FSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVND 476
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A+ VF+ L K++V WN+M+ G+AQ+ G EA+++++ + + + PN+ TF+ +++
Sbjct: 477 AKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVAST 536
Query: 493 IGLVEEGWHYFNSMIR------DHGISPRMDHIA------------------------SV 522
+ + G + +I+ H + +D A S+
Sbjct: 537 LASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSM 596
Query: 523 VHLFACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGC 558
+ +A G A + + + +EPN V + +LS C
Sbjct: 597 ITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSAC 635
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 213/396 (53%), Gaps = 1/396 (0%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
R IH R +G + ++N L+ Y G L A+ +FD RN +SW S++S Y
Sbjct: 35 RLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMY 94
Query: 153 CQCGEHVHGLKIFLLSRKSGVAI-SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
Q G + +F+ +K+ + +EF ASVL AC + +G Q+H + K L+ +
Sbjct: 95 TQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDAN 154
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
+V LINLYAK +D A VF + + W+ +I GYAQ+G A++LF +M
Sbjct: 155 VYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGI 214
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
G+ P + + A + + GGRQ+H + + T V N ++D Y KC L
Sbjct: 215 EGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSA 274
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+ K FD M+ ++VSW +I+G++ + EAI + +M G P+ + ++ILN
Sbjct: 275 ARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGS 334
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ AI G+Q H ++K +++ + +AL+DMYAKC L +AR VFD L+ + +S+N M
Sbjct: 335 LAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAM 394
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
+ GY+++ EA+ I+ M+ ++P+ TF+ +L
Sbjct: 395 IEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLL 430
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 142/281 (50%), Gaps = 9/281 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG ++ + L+ +Y K S +NDA+ +F+ + ++++ W+++I G +Q E A
Sbjct: 449 IIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEA 508
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F ++ + PN +T+V V+ ++ G++ H + ++G++ + HVSN LI+M
Sbjct: 509 IKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDM 568
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + + +F+++ + I W S++++Y Q G L++F L ++ V + +
Sbjct: 569 YAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTF 628
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA--MGLINLYAKCEKLDLASRVFSNI 238
VL ACA G + G+ H K + + + ++NL+ + KL A +
Sbjct: 629 VGVLSACAHAGFVGEGLN-HFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERM 687
Query: 239 QL-PDLTAWSALIG-----GYAQLGKACEAIDLFVKMFSSG 273
+ P W +L+ G A++G+ + L SG
Sbjct: 688 PIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSG 728
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H G ++ + + L+ Y+ GRL DAR +FD + +NLVSW +++ Y QHG
Sbjct: 41 HARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRD 100
Query: 462 REALEIYSMMQENKIK-PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
A+ ++ Q+ + PN+ VL AC V G HGI+ ++D A
Sbjct: 101 DCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQV-------HGIAVKLDLDA 153
Query: 521 SV------VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+V ++L+A G A + P+ V W +++G
Sbjct: 154 NVYVGTALINLYAKLGCMDEAMLVFHALPVR-TPVTWNTVITG 195
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/667 (37%), Positives = 391/667 (58%), Gaps = 6/667 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF +V L+ Y+K S D +K+FDEM ERNV++W+ LISG+++ M + L
Sbjct: 120 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVL 179
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M +PN +T+ A+ A G G ++H + ++GL+ VSN LIN+Y
Sbjct: 180 TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A+ +FD + ++ ++W S++S Y G + L +F R + V +SE S A
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFA 299
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-L 240
SV+ CA L L+ Q+H V K FD+ + L+ Y+KC + A R+F I +
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+A+I G+ Q EA+DLF +M G+ P+E T+S +L A I ++
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEV 415
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++K + + V +LD Y K +EE+ K F +D+ D+V+W+A++AG+ +
Sbjct: 416 HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET 475
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA-IEWGKQTHCCIVKPGFDSNVVIGSA 419
AI++ ++ G PN +T+S+ILN+ + A + GKQ H +K DS++ + SA
Sbjct: 476 EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSA 535
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+ MYAK G + A +VF K+LVSWN+M+ GYAQHG +AL+++ M++ K+K +
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TFIGV +AC H GLVEEG YF+ M+RD I+P +H + +V L++ GQ +A + I
Sbjct: 596 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 655
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
++ P +WR +L+ C+ HK LGR AAEKI++ PED++A+++LSN+YAE+ W
Sbjct: 656 ENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQ 715
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
E AKVRK+M E+++KK+ G SW E++NK + F + ++ + LS L D G
Sbjct: 716 ERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLG 775
Query: 660 YVPDPIY 666
Y PD Y
Sbjct: 776 YEPDTSY 782
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 162/546 (29%), Positives = 279/546 (51%), Gaps = 14/546 (2%)
Query: 21 VKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYV 80
V SR+ +A LFD+ P R+ S+ +L+ GFS+ G + A F + +E + +
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 81 GAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
+ A+ D G+++H + + G + V L++ Y K + VFD ER
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
N ++W +L+S Y + + L +F+ + G + F+ A+ LG A G G+Q+H
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
++V K L+ V+ LINLY KC + A +F ++ + W+++I GYA G
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
EA+ +F M + + SE +F+ V+ A++KE QLH ++K GF + ++
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 321 DFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
YSKC + ++L+ F E+ +VVSW A+I+G L + EA++L +M +G PN
Sbjct: 338 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNE 397
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
+TYS IL + +P I + H +VK ++ + +G+AL+D Y K G++ +A KVF
Sbjct: 398 FTYSVIL---TALPVIS-PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 453
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ K++V+W+ ML GYAQ G A++++ + + IKPN+ TF +L+ C
Sbjct: 454 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513
Query: 500 WHYFNSMIRDHGISPRMDH----IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
F+ I R+D ++++ ++A +G A E K E + V W ++
Sbjct: 514 GKQFHGF----AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMI 568
Query: 556 SGCKTH 561
SG H
Sbjct: 569 SGYAQH 574
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 245/499 (49%), Gaps = 24/499 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + N L+ +Y+K + A+ LFD+ ++V++W+++ISG++ G+ A
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + + ++ + CA+ + R +++H + + G + ++ L+
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVA 339
Query: 121 YGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KC +L + + + N +SW +++S + Q + +F ++ GV +EF+
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFT 399
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ +L A V+ ++H+ V K E V L++ Y K K++ A++VFS I
Sbjct: 400 YSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID 455
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GR 298
D+ AWSA++ GYAQ G+ AI +F ++ G+ P+E TFS +L A ++G G+
Sbjct: 456 DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGK 515
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q H IK S V++ +L Y+K +E + + F E D+VSWN++I+G+
Sbjct: 516 QFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHG 575
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSN 413
+A+++ K+M + T+ + + +E G++ C + P + N
Sbjct: 576 QAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN 635
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG---LGREALEIYS 469
S +VD+Y++ G+L A KV +++ + W T+L H LGR A E
Sbjct: 636 ----SCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKII 691
Query: 470 MMQENKIKPNDNTFIGVLS 488
M KP D+ +LS
Sbjct: 692 AM-----KPEDSAAYVLLS 705
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/659 (36%), Positives = 378/659 (57%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G NV L+ +Y K I+ A +FD +P +N ++W+A+I+G+SQIG VAL F
Sbjct: 144 GLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELF 203
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M + P+ + AVSAC++ G G++ HG YR +E ++ V N LI++Y KC
Sbjct: 204 GKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKC 263
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
LS A+ +FD RN +SW ++++ Y Q + +F + G F+CAS+L
Sbjct: 264 SRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASIL 323
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+C L + G Q+H+ K LE D++V LI++YAKCE L A VF + D
Sbjct: 324 NSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAI 383
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+++A+I GY++LG AID+F KM L PS +TF +LG + +Q+H LI
Sbjct: 384 SYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLI 443
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K G S + ++++D YSK L+E++ F+ M D+V WNA+I G + EA+
Sbjct: 444 VKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAV 503
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L + G PN +T+ ++ ++S + ++ G+Q H I+K G DS+ + +AL+DMY
Sbjct: 504 KLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMY 563
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG + + R +F+ K+++ WN+M+ YAQHG EAL ++ MM ++PN TF+
Sbjct: 564 AKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFV 623
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVLSAC H GLV+EG +F+ M + I P +H ASVV+LF G+ A EFI+ PI
Sbjct: 624 GVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPI 683
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP VWR LLS C ++ +GRYA E L DP D+ +++SN+YA +W + K+
Sbjct: 684 EPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKL 743
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
R+ M + K+ G SW E+ ++H F + ++ ++++L+ L +GGY+PD
Sbjct: 744 RQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSILKNGGYLPD 802
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 187/615 (30%), Positives = 313/615 (50%), Gaps = 44/615 (7%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G P++ N LL Y K R+ DA++LFD MP +N++SW + IS +Q G E A+
Sbjct: 38 VVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAV 97
Query: 62 NYFRLM--VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
F PN + A+ ACA G+++HG R GL+ N +V LIN
Sbjct: 98 ALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALIN 157
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y K G + +A VFDA +N ++W ++++ Y Q G+ L++F GV F
Sbjct: 158 LYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFV 217
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
AS + AC+ LG L+ G Q H ++ A+E D V LI+LY KC +L LA ++F ++
Sbjct: 218 LASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCME 277
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+L +W+ +I GY Q EA+ +F ++ G P + +L + + GRQ
Sbjct: 278 NRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQ 337
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ IK S +V N+++D Y+KCE L E+ F+ + E D +S+NA+I G+
Sbjct: 338 VHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGD 397
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
AI++ M + P+ T+ ++L +SS AIE KQ H IVK G ++ GS+
Sbjct: 398 LAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSS 457
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+D+Y+K + DA+ VF+ + ++++V WN M+ G AQ+ G EA+++++ +Q + + PN
Sbjct: 458 LIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPN 517
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIR-----DHGISPRM-DHIA------------- 520
+ TF+ +++ + + G + +I+ DH +S + D A
Sbjct: 518 EFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFE 577
Query: 521 -----------SVVHLFACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCK------- 559
S++ +A GQ A + + + +EPN V + +LS C
Sbjct: 578 STLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDE 637
Query: 560 --THKDLVLGRYAAE 572
H D + +YA E
Sbjct: 638 GLRHFDFMKTKYAIE 652
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 213/391 (54%), Gaps = 2/391 (0%)
Query: 99 HGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
H R +G + ++N L+ Y K G + A+ +FD +N +SW S +S + Q G
Sbjct: 34 HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93
Query: 159 VHGLKIFLLSRKS--GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
+ +F +++ G A +EF AS L ACA + G Q+H + + L+ + +V
Sbjct: 94 EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153
Query: 217 GLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
LINLYAK +D A VF + + + W+A+I GY+Q+G+ A++LF KM G+ P
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRP 213
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
+ + A + + GGRQ H ++ + V N ++D Y KC L + K F
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
D M+ ++VSW +IAG++ + EA+ + + EG P+++ ++ILN + AI
Sbjct: 274 DCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIW 333
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G+Q H +K +S+ + ++L+DMYAKC L +AR VF+ L+ + +S+N M+ GY+
Sbjct: 334 QGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYS 393
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
+ G A++++S M+ +KP+ TF+ +L
Sbjct: 394 RLGDLAGAIDVFSKMRYCSLKPSPLTFVSLL 424
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 173/351 (49%), Gaps = 14/351 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG ++ + L+ +Y KFS + DA+ +F+ M R+++ W+A+I G +Q E A
Sbjct: 443 IVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEA 502
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F + L PN +T+V V+ ++ G++ H ++ ++G + + HVSN LI+M
Sbjct: 503 VKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDM 562
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + + +F+++L ++ I W S++S+Y Q G+ L +F + +GV + +
Sbjct: 563 YAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTF 622
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
VL ACA G + G++ + K A+E ++NL+ + KL A +
Sbjct: 623 VGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMP 682
Query: 240 L-PDLTAWSALIG-----GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL---GAFAD 290
+ P W +L+ G ++G+ + L SG PS V S + G ++D
Sbjct: 683 IEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSG--PS-VLMSNIYASRGLWSD 739
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
++ G ++ + G+ S+ V V F ++ E+ + +DE
Sbjct: 740 AQKLRQGMDCAGVVKEPGY-SWIEVMKEVHTFIARGREHPEADVIYSLLDE 789
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
H V G ++ + + L+ Y+K GR+ DAR++FD + KNLVSW + + +AQHG
Sbjct: 33 AHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGC 92
Query: 461 GREALEIYSMMQE--NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
+A+ +++ Q PN+ L AC V G +R G+ +
Sbjct: 93 EEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRI-GLDGNVYV 151
Query: 519 IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++++L+A G A + P++ N V W +++G
Sbjct: 152 GTALINLYAKVGCIDAAMLVFDALPVK-NPVTWTAVITG 189
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/665 (35%), Positives = 389/665 (58%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V N L+ MY + + A++LF+ MP+R++ISW+A+I+G+++ A+ +
Sbjct: 415 GHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLY 474
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M ++P T++ +SAC + GK IH + RSG++ N H++N L+NMY +C
Sbjct: 475 KQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRC 534
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + AQ VF+ + R+ ISW S+++ + Q G + K+FL +K G+ + + ASVL
Sbjct: 535 GSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVL 594
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C L++G QIH L+ + L+ D + LIN+Y +C L A VF +++ ++
Sbjct: 595 VGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVM 654
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+A+IGG+A G+ +A +LF +M + G P + TFS +L A G+++ + I
Sbjct: 655 SWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHI 714
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+ G+ T V N ++ YSK + ++ K FD+M D++SWN +IAG+ + G A+
Sbjct: 715 LNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTAL 774
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+ M +G N +++ +ILN S A+E GK+ H IVK +V +G+AL+ MY
Sbjct: 775 QFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMY 834
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG L +A++VFD+ + KN+V+WN M+ YAQHGL +AL+ ++ M + IKP+ +TF
Sbjct: 835 AKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFT 894
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
+LSAC H GLV EG F+S+ HG+SP ++H +V L G+ + A I P
Sbjct: 895 SILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPF 954
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
P+ VW LL C+ H ++ L +AA L + + + +++LSNVYA A WD+ AK+
Sbjct: 955 PPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKI 1014
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDP 664
R++M+ + ++K+ G SW E+ N +H F + + + +++E + +LS+ + GY PD
Sbjct: 1015 RRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDT 1074
Query: 665 IYSSH 669
Y H
Sbjct: 1075 QYVLH 1079
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 187/658 (28%), Positives = 327/658 (49%), Gaps = 39/658 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ +G P++ N L+ MYVK ++DA ++F +MP R+VISW++LIS ++Q G + A
Sbjct: 108 MVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKA 167
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M P+ TY+ ++AC S + GK+IH ++ +G + + V N L+NM
Sbjct: 168 FQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNM 227
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKC L SA+ VF R+ +S+ ++L Y Q + +F G+ + +
Sbjct: 228 YGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTY 287
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++L A L G +IH L L D V L ++ +C + A +
Sbjct: 288 INLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFAD 347
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ ++ALI AQ G EA + + +M S G++ + T+ VL A + K G +
Sbjct: 348 RDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELI 407
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS I ++G SS + N+++ Y++C L + + F+ M + D++SWNA+IAG+
Sbjct: 408 HSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDR 467
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
GEA++L K M EG P T+ ++L+ ++ A GK H I++ G SN + +AL
Sbjct: 468 GEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANAL 527
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
++MY +CG + +A+ VF+ +++++SWN+M+ G+AQHG A +++ M++ ++P+
Sbjct: 528 MNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDK 587
Query: 481 NTFIGVLSAC-----------VHIGLVEEGWH--------YFNSMIRDHGISPRMDHIAS 521
TF VL C +H+ ++E G N IR + + S
Sbjct: 588 ITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHS 647
Query: 522 VVHL-----------FACRGQTRRAYEF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLG 567
+ H FA +G+ R+A+E +++ +P K + +L C + L G
Sbjct: 648 LRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEG 707
Query: 568 RYAAEKILSTDPE-DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
+ IL++ E DT L + Y+++ + KV M + + SW ++
Sbjct: 708 KKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDI-----MSWNKM 760
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/560 (27%), Positives = 286/560 (51%), Gaps = 2/560 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G + ++ L M+V+ + A++ + +R+V+ ++ALI+ +Q G E A
Sbjct: 311 VNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAF 370
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M + N TY+ ++AC++ +G+ IH + G + + N LI+MY
Sbjct: 371 EQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMY 430
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+CG L A+ +F+ +R+ ISW ++++ Y + + +K++ + GV +
Sbjct: 431 ARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFL 490
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L AC G IH + + ++ + +A L+N+Y +C + A VF +
Sbjct: 491 HLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR 550
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W+++I G+AQ G A LF++M GL P ++TF+ VL + + GRQ+H
Sbjct: 551 DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIH 610
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
LII+ G + N +++ Y +C L+++ + F + +V+SW A+I G
Sbjct: 611 MLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDR 670
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A EL M +G P T+S+IL ++ GK+ I+ G++ + +G+AL+
Sbjct: 671 KAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALI 730
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
Y+K G + DARKVFD + +++++SWN M+ GYAQ+GLG AL+ MQE + N
Sbjct: 731 SAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKF 790
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
+F+ +L+AC +EEG +++ + + A+++ ++A G A E +
Sbjct: 791 SFVSILNACSSFSALEEGKRVHAEIVK-RKMQGDVRVGAALISMYAKCGSLEEAQEVFDN 849
Query: 542 SPIEPNKVVWRCLLSGCKTH 561
E N V W +++ H
Sbjct: 850 F-TEKNVVTWNAMINAYAQH 868
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/530 (31%), Positives = 258/530 (48%), Gaps = 35/530 (6%)
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
E N YV V C + K IH +M +G+ + +SN LINMY KC +S A
Sbjct: 79 ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQ 138
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VF R+ ISW SL+S Y Q G ++F + +G S+ + S+L AC
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L+ G +IHS + + + D V L+N+Y KCE L A +VFS I D+ +++ ++G
Sbjct: 199 LEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGL 258
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
YAQ E I LF +M S G+ P +VT+ +L AF G+++H L + G +S
Sbjct: 259 YAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSD 318
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V + + +C + + + + + DVV +NALIA HY EA E M
Sbjct: 319 IRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRS 378
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+G N TY ++LN S A+ G+ H I + G S+V IG++L+ MYA+CG L
Sbjct: 379 DGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPR 438
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
AR++F+ + ++L+SWN ++ GYA+ EA+++Y MQ +KP TF+ +LSAC +
Sbjct: 439 ARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTN 498
Query: 493 IGLVEEGWHYFNSMIRDHGISP-------------RMDHIASVVHLF------------- 526
+G ++R GI R I ++F
Sbjct: 499 SSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNS 557
Query: 527 -----ACRGQTRRAYEF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
A G AY+ +K +EP+K+ + +L GCK + L LGR
Sbjct: 558 MIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGR 607
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 222/461 (48%), Gaps = 2/461 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG N N L+ MY + I +AQ +F+ R++ISW+++I+G +Q G E A
Sbjct: 512 ILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAA 571
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M LEP+ T+ + C + G++IH + SGL+L+ ++ N LINM
Sbjct: 572 YKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINM 631
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG L A VF + RN +SW +++ + GE ++F + G + +
Sbjct: 632 YIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTF 691
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L AC L G ++ + + E D V LI+ Y+K + A +VF +
Sbjct: 692 SSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPN 751
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+ +I GYAQ G A+ +M G++ ++ +F +L A + G+++
Sbjct: 752 RDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRV 811
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ I+K V ++ Y+KC LEE+ + FD E +VV+WNA+I +
Sbjct: 812 HAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLA 871
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFDSNVVIGSA 419
+A++ M EG P+ T+++IL+ + + G + + + G +
Sbjct: 872 SKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGC 931
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
LV + + GR +A + + + + W T+L HG
Sbjct: 932 LVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHG 972
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/662 (36%), Positives = 382/662 (57%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF +V+T + LL MY K +++ + + F MPE+N +SWSA+I+G Q L
Sbjct: 201 VKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGL 260
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M + + T+ +CA R G ++HG ++ + + ++MY
Sbjct: 261 ELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMY 320
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC LS AQ +F++ N S+ +++ Y + + + L +F L +KSG+ + E S +
Sbjct: 321 MKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLS 380
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
ACAV+ G+Q+H L K + + VA ++++Y KC L A VF +
Sbjct: 381 GAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSR 440
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +W+A+I + Q G + + LFV M SG+ P E T+ VL A A + G ++H
Sbjct: 441 DAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIH 500
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ IIK +FV ++D YSKC ++E++ K D + E VVSWNA+I+G
Sbjct: 501 NRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSE 560
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA + ML G P+ +TY+ IL+ +++ +E GKQ H I+K S+ I S LV
Sbjct: 561 EAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLV 620
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY+KCG + D + +F+ +++ V+WN M+ GYAQHGLG EAL+I+ MQ +KPN
Sbjct: 621 DMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHA 680
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL AC H+GLVE+G HYF+SM+ ++G+ P+++H + VV + GQ +A E I+
Sbjct: 681 TFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEG 740
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P E + V+WR LLS CK H ++ + AA IL +PED++A+++LSN+YA A MW+E
Sbjct: 741 MPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEV 800
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
K+RK+M+ LKK+ GCSW E+++++H F A + +++E ++ L+ + GY+
Sbjct: 801 TKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYM 860
Query: 662 PD 663
PD
Sbjct: 861 PD 862
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/553 (30%), Positives = 286/553 (51%), Gaps = 2/553 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+ +++N +L Y I AQKLFD MPER+V+SW++LISG+ G ++ F M
Sbjct: 107 DTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMG 166
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ T+ + +C+S D G +IHG + G + + + L++MY KC L
Sbjct: 167 RMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLD 226
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+ F + E+N +SW ++++ Q + GL++F +K+GV +S+ + ASV +CA
Sbjct: 227 CSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCA 286
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L L++G Q+H K D + +++Y KC L A ++F+++ +L +++A
Sbjct: 287 GLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNA 346
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I GYA+ K EA+ +F + SGL EV+ S A A +K + G Q+H L +K
Sbjct: 347 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSL 406
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
S VAN +LD Y KC L E+ F+EM D VSWNA+IA H + + + + L
Sbjct: 407 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 466
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
ML G P+ +TY ++L + A+ G + H I+K + +G AL+DMY+KCG
Sbjct: 467 WMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCG 526
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ A K+ D L+ + +VSWN ++ G++ EA + +S M E + P++ T+ +L
Sbjct: 527 MMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILD 586
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
C ++ VE G +I+ S +I+S + + + ++ I +
Sbjct: 587 TCANLVTVELGKQIHAQIIKKELQSDA--YISSTLVDMYSKCGNMQDFQLIFEKAPNRDF 644
Query: 549 VVWRCLLSGCKTH 561
V W ++ G H
Sbjct: 645 VTWNAMVCGYAQH 657
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 151/550 (27%), Positives = 253/550 (46%), Gaps = 47/550 (8%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC------------- 124
T+ C+ R GK+ H RM + + V+NCLI MY KC
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 125 ------------------GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
G + AQ +FDA ER+ +SW SL+S Y G+H + +FL
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
+ G + A VL +C+ L + G+QIH L K + D L+++YAKC+
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
KLD + + F ++ + +WSA+I G Q ++LF +M +G+ S+ TF+ V
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
+ A + G QLH +K F + + LD Y KC L ++ K F+ + H++ S
Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
+NA+I G+ S EA+ + + + G + + S + I G Q H +
Sbjct: 344 YNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSM 403
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
K SN+ + +A++DMY KCG L +A VF+ + S++ VSWN ++ + Q+G + L
Sbjct: 404 KSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLS 463
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG--ISPR--MDHIASV 522
++ M ++ ++P++ T+ VL AC GW N + H I R +D +
Sbjct: 464 LFVWMLQSGMEPDEFTYGSVLKACA-------GWQALNCGMEIHNRIIKSRLGLDSFVGI 516
Query: 523 --VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS--TD 578
+ +++ G +A E + E V W ++SG K + K+L D
Sbjct: 517 ALIDMYSKCGMMEKA-EKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVD 575
Query: 579 PEDTSAHIML 588
P++ + +L
Sbjct: 576 PDNFTYATIL 585
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/664 (36%), Positives = 380/664 (57%), Gaps = 2/664 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S P+++ NH+L MY K + DA+K FD M RNV+SW+ +ISG+SQ G A
Sbjct: 183 ILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDA 242
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ + M+ P+ T+ + AC GD G+++HG + +SG + + N LI+M
Sbjct: 243 IIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISM 302
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
Y + G + A VF ++ ISW S+++ + Q G + L +F + R+ +EF
Sbjct: 303 YTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFI 362
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV AC L + G QIH + K L + F L ++YAK L A R F I+
Sbjct: 363 FGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIE 422
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PDL +W+A+I ++ G EAI F +M +GLMP +TF +L A G Q
Sbjct: 423 SPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQ 482
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLASC 358
+HS IIK+G V N++L Y+KC L ++ F ++ E+ ++VSWNA+++ L
Sbjct: 483 IHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHK 542
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
GE L K MLF + P+ T + IL +++ ++E G Q HC VK G +V + +
Sbjct: 543 QAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSN 602
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+DMYAKCG L AR VF + ++VSW++++VGYAQ GLG EAL ++ MM+ ++P
Sbjct: 603 RLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQP 662
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N+ T++GVLSAC HIGLVEEGWH++N+M + GI P +H++ +V L A G A F
Sbjct: 663 NEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENF 722
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
IK P+ +W+ LL+ CKTH ++ + AAE IL DP +++A ++LSN++A W
Sbjct: 723 IKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNW 782
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
E A++R +MK+ ++K G SW +++++H F + + Q D++ ++ L + + D
Sbjct: 783 KEVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLEDLWLQMLDD 842
Query: 659 GYVP 662
GY P
Sbjct: 843 GYDP 846
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 243/487 (49%), Gaps = 14/487 (2%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TY + AC S + GK+IH + +S + + + N ++NMYGKCG L A+ FD
Sbjct: 159 TYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTM 218
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
RN +SW ++S Y Q G+ + +++ +SG + S++ AC + G++ +G
Sbjct: 219 QLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGR 278
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+H V K + LI++Y + ++ AS VF+ I DL +W+++I G+ QLG
Sbjct: 279 QLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLG 338
Query: 258 KACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
EA+ LF MF G P+E F V A + E GRQ+H + K G F
Sbjct: 339 YEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAG 398
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
++ D Y+K L +++ F +++ D+VSWNA+IA S EAI M+ G
Sbjct: 399 CSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLM 458
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ T+ ++L I G Q H I+K G D + ++L+ MY KC L+DA V
Sbjct: 459 PDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNV 518
Query: 437 FDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
F +S + NLVSWN +L QH E ++ +M ++ KP++ T +L C +
Sbjct: 519 FKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELAS 578
Query: 496 VEEG--WHYF---NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
+E G H F + ++ D +S R+ + ++A G + A + S+ P+ V
Sbjct: 579 LEVGNQVHCFSVKSGLVVDVSVSNRL------IDMYAKCGSLKHARDVFGSTQ-NPDIVS 631
Query: 551 WRCLLSG 557
W L+ G
Sbjct: 632 WSSLIVG 638
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 206/434 (47%), Gaps = 3/434 (0%)
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAV 189
QFV +S S ++ C+ + L F + S + + + +++ AC
Sbjct: 110 QFVCLIKQHSRELSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTS 169
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
+ +LK G +IH + K + D + ++N+Y KC L A + F +QL ++ +W+ +
Sbjct: 170 IRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIM 229
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I GY+Q G+ +AI ++++M SG P +TF ++ A + GRQLH +IK G+
Sbjct: 230 ISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGY 289
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
N ++ Y++ + + F + D++SW ++I G + EA+ L +D
Sbjct: 290 DHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRD 349
Query: 370 MLFEG-HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M +G + PN + + ++ + + E+G+Q H K G NV G +L DMYAK G
Sbjct: 350 MFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFG 409
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
L A + F + S +LVSWN ++ ++ G EA+ + M + P+ TF+ +L
Sbjct: 410 FLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLC 469
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC + +G + +I+ G+ S++ ++ A+ K N
Sbjct: 470 ACGSPVTINQGTQIHSYIIKI-GLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANL 528
Query: 549 VVWRCLLSGCKTHK 562
V W +LS C HK
Sbjct: 529 VSWNAILSACLQHK 542
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 155/309 (50%), Gaps = 10/309 (3%)
Query: 261 EAIDLF-VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
EA+D F +S + T+ ++ A ++ G+++H I+K + N +
Sbjct: 139 EALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHI 198
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
L+ Y KC L+++ K FD M +VVSW +I+G+ + +AI + ML G+ P+
Sbjct: 199 LNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDP 258
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
T+ +I+ I+ G+Q H ++K G+D +++ +AL+ MY + G++ A VF
Sbjct: 259 LTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTM 318
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+S+K+L+SW +M+ G+ Q G EAL ++ M ++ +PN+ F V SAC + L E
Sbjct: 319 ISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSL-LEPE 377
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLL 555
+ M G+ + S+ ++A G RA+ I+S P+ V W ++
Sbjct: 378 FGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIES----PDLVSWNAII 433
Query: 556 SGCKTHKDL 564
+ D+
Sbjct: 434 AAFSDSGDV 442
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/662 (35%), Positives = 392/662 (59%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF +V N L++MY K D+++LFDE+PERNV+SW+AL S + QI A
Sbjct: 183 VVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEA 242
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F MV ++PN ++ V+AC D+ GK IHG + + G + + +N L++M
Sbjct: 243 VGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDM 302
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L+ A VF+ + + +SW ++++ H L++ ++SG+ + F+
Sbjct: 303 YAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTL 362
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S L ACA +G ++G Q+HS + K +E D FV++GL+++Y+KC+ L+ A F+ +
Sbjct: 363 SSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE 422
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL AW+A+I GY+Q + EA+ LFV+M G+ ++ T S +L + A ++ RQ+
Sbjct: 423 KDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQV 482
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L +K GF S +V N+++D Y KC +E++ + F+E D+VS+ ++I +
Sbjct: 483 HGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQG 542
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA++L +M P+ + S++LN +++ A E GKQ H I+K GF ++ G++L
Sbjct: 543 EEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSL 602
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V+MYAKCG ++DA + F L+ + +VSW+ M+ G AQHG GR+AL++++ M + + PN
Sbjct: 603 VNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNH 662
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
T + VL AC H GLV E YF SM G P +H A ++ L G+ A E +
Sbjct: 663 ITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVN 722
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
P E N VW LL + HKD+ LGR AAE + +PE + H++L+N+YA A W+
Sbjct: 723 KMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWEN 782
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
A+VR++M++ +KK+ G SW E+++K++ F + ++ +++ +++LS + GY
Sbjct: 783 VAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGY 842
Query: 661 VP 662
VP
Sbjct: 843 VP 844
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 202/600 (33%), Positives = 317/600 (52%), Gaps = 12/600 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ SG + NHL+ +Y K A+KL DE E +++SWSALISG++Q G+ A
Sbjct: 82 ITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGA 141
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M ++ N +T+ + AC+ D R GK++HG + SG E + V+N L+ M
Sbjct: 142 LMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVM 201
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ---CGEHVHGLKIFLLSRKSGVAISE 177
Y KC ++ +FD ERN +SW +L S Y Q CGE V +F SG+ +E
Sbjct: 202 YAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAV---GLFYEMVLSGIKPNE 258
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
FS +S++ AC L + G IH + K ++D F A L+++YAK L A VF
Sbjct: 259 FSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEK 318
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
I+ PD+ +W+A+I G +A++L +M SG+ P+ T S L A A + G
Sbjct: 319 IKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELG 378
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
RQLHS ++KM S FV+ ++D YSKC+LLE++ F+ + E D+++WNA+I+G+
Sbjct: 379 RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQY 438
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA+ L +M EG N T S IL ++ + + +Q H VK GF S++ +
Sbjct: 439 WEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVV 498
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
++L+D Y KC + DA ++F+ + +LVS+ +M+ YAQ+G G EAL+++ MQ+ ++K
Sbjct: 499 NSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELK 558
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ +L+AC ++ E+G + I +G + S+V+++A G A
Sbjct: 559 PDRFVCSSLLNACANLSAFEQG-KQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGR 617
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSA-HIMLSNVYAEAN 596
S E V W ++ G H GR A + E S HI L +V N
Sbjct: 618 AF-SELTERGIVSWSAMIGGLAQHGH---GRQALQLFNQMLKEGVSPNHITLVSVLGACN 673
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/585 (30%), Positives = 300/585 (51%), Gaps = 39/585 (6%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P +Y +S C + R G +IH + +SGL + + N LIN+Y KC A+ +
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKL 113
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
D S E + +SW +L+S Y Q G L F GV +EF+ +SVL AC+++ +L
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G Q+H +V E D FVA L+ +YAKC++ + R+F I ++ +W+AL Y
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q+ EA+ LF +M SG+ P+E + S ++ A ++++ G+ +H +IK+G+
Sbjct: 234 VQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDP 293
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
F AN ++D Y+K L +++ F+++ + D+VSWNA+IAG + H+ +A+ELL M
Sbjct: 294 FSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRS 353
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G CPN++T S+ L + + E G+Q H ++K +S++ + LVDMY+KC L DA
Sbjct: 354 GICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDA 413
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC--- 490
R F+ L K+L++WN ++ GY+Q+ EAL ++ M + I N T +L +
Sbjct: 414 RMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGL 473
Query: 491 --VHI-----GL-VEEGWH----YFNSMIRDHGISPRMDH---------------IASVV 523
VH+ GL V+ G+H NS+I +G ++ S++
Sbjct: 474 QVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMI 533
Query: 524 HLFACRGQTRRAYEF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD-P 579
+A GQ A + ++ ++P++ V LL+ C G+ IL
Sbjct: 534 TAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFV 593
Query: 580 EDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
D A L N+YA+ D+ + + E+ + SW+ +
Sbjct: 594 LDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI-----VSWSAM 633
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 195/361 (54%)
Query: 148 LLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
L+ + Q + I L K + S + +L C +L+ G+QIH+ + K
Sbjct: 27 LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
L D + LINLY+KC A ++ PDL +WSALI GYAQ G A+ F
Sbjct: 87 LSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
+M G+ +E TFS VL A + VK+ G+Q+H +++ GF FVANT++ Y+KC+
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCD 206
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
+S + FDE+ E +VVSWNAL + ++ GEA+ L +M+ G PN ++ S+++N
Sbjct: 207 EFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVN 266
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ + GK H ++K G+D + +ALVDMYAK G L DA VF+ + ++VS
Sbjct: 267 ACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVS 326
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
WN ++ G H +ALE+ M+ + I PN T L AC +GL E G +S++
Sbjct: 327 WNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLM 386
Query: 508 R 508
+
Sbjct: 387 K 387
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/664 (36%), Positives = 381/664 (57%), Gaps = 3/664 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + N L+ + K R+++A+ +FD+MP +N+I+WS+++S +SQ G E A
Sbjct: 75 IIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEA 134
Query: 61 LNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L F L PN + + AC G G ++HG + RSG + + +V LI+
Sbjct: 135 LMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLID 194
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y K G + A+ VFD E+ +++W ++++ Y +CG L++F R++ V +
Sbjct: 195 FYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYV 254
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+SVL AC++L L+ G QIH+ V + E D V LI+ Y KC ++ ++F +
Sbjct: 255 VSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV 314
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ ++ +W+ +I GY Q EA+ LF +M G P + VL + + GRQ
Sbjct: 315 VKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQ 374
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ IK S FV N ++D Y+K LL ++ K FD M E +V+S+NA+I G+ +
Sbjct: 375 VHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEK 434
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA+EL +M PN +T++ ++ +S++ ++ G+Q H +VK G D + +A
Sbjct: 435 LSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNA 494
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMYAKCG + +ARK+F+ +++V WN+M+ +AQHG EAL ++ M + I+PN
Sbjct: 495 LVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPN 554
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ VLSAC H G VE+G ++FNSM GI P +H A VV L G+ A EFI
Sbjct: 555 YVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFI 613
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ PIEP +VWR LLS C+ ++ LG+YAAE +STDP+D+ ++I+LSN++A MW
Sbjct: 614 EKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWA 673
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ KVR M + K+ G SW E+ NK++ F +R + D+ V++ L H+ G
Sbjct: 674 DVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVF-IARDTTHREADIGSVLDILIQHIKGAG 732
Query: 660 YVPD 663
YVPD
Sbjct: 733 YVPD 736
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 148/493 (30%), Positives = 264/493 (53%), Gaps = 3/493 (0%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L P + + SR K IHG++ SGL+ ++ ++N LIN+ K + +A+
Sbjct: 45 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNAR 104
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVL 190
VFD +N I+W S++S Y Q G L +F+ L RKSG +EF ASV+ AC L
Sbjct: 105 VVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQL 164
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G ++ G Q+H V + + D +V LI+ Y+K ++ A VF + W+ +I
Sbjct: 165 GVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTII 224
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
GY + G++ +++LF +M + ++P S VL A + ++ GG+Q+H+ +++ G
Sbjct: 225 AGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTE 284
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
V N ++DFY+KC ++ K FD+M +++SW +I+G++ + EA++L +M
Sbjct: 285 MDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEM 344
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
G P+ + +++L A+E G+Q H +K +S+ + + L+DMYAK L
Sbjct: 345 NRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLL 404
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
DA+KVFD ++ +N++S+N M+ GY+ EALE++ M+ KPN+ TF +++A
Sbjct: 405 IDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAA 464
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
++ + G + N +++ G+ ++V ++A G A + SS I + V
Sbjct: 465 SNLASLRHGQQFHNQLVK-MGLDFCPFVTNALVDMYAKCGSIEEARKMFNSS-IWRDVVC 522
Query: 551 WRCLLSGCKTHKD 563
W ++S H +
Sbjct: 523 WNSMISTHAQHGE 535
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 19/220 (8%)
Query: 354 HLASCH-------YGEAIELLKDMLFEGHC---PNLYT----YSNILNIS-SDIPAIEWG 398
HL SC+ + + + L + C PNL ++N+L +S S P I +
Sbjct: 10 HLKSCYRTTKKQAFNFSTSVSPQFLLQNPCLQIPNLRPKRREFANLLQLSISRNPIIHY- 68
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
K H I+ G S+ + + L+++ +K R+++AR VFD + KNL++W++M+ Y+Q
Sbjct: 69 KIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQ 128
Query: 459 GLGREALEIYSMMQENKIK-PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
G EAL ++ +Q + PN+ V+ AC +G+VE+G ++R G +
Sbjct: 129 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRS-GFDQDVY 187
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
S++ ++ G A + E V W +++G
Sbjct: 188 VGTSLIDFYSKNGNIEEA-RLVFDQLSEKTAVTWTTIIAG 226
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/664 (37%), Positives = 382/664 (57%), Gaps = 3/664 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S P+++ NH+L MY K + DA+K FD M R+V+SW+ +ISG+SQ G A
Sbjct: 106 ILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDA 165
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ + M+ P+ T+ + AC GD G ++HG + +SG + + N LI+M
Sbjct: 166 IIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISM 225
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV-AISEFS 179
Y K G ++ A VF ++ ISW S+++ + Q G + L +F + GV +EF
Sbjct: 226 YTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFI 285
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV AC L + G QI + K L + F L ++YAK L A R F I+
Sbjct: 286 FGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIE 345
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PDL +W+A+I A EAI F +M GLMP ++TF +L A G Q
Sbjct: 346 SPDLVSWNAIIAALAN-SDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQ 404
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLASC 358
+HS IIKMG V N++L Y+KC L ++ F ++ E+ ++VSWNA+++
Sbjct: 405 IHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHK 464
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
GEA L K MLF + P+ T + IL +++ ++E G Q HC VK G +V + +
Sbjct: 465 QPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSN 524
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+DMYAKCG L AR VFD + ++VSW++++VGYAQ GLG+EAL ++ MM+ ++P
Sbjct: 525 RLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQP 584
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N+ T++GVLSAC HIGLVEEGWH +N+M + GI P +H++ +V L A G A F
Sbjct: 585 NEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENF 644
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
IK + +P+ +W+ LL+ CKTH ++ + AAE IL DP +++A ++LSN++A A W
Sbjct: 645 IKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNW 704
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
E A++R +MK+ ++K G SW E+++++H F + + Q +++ ++ L + + D
Sbjct: 705 KEVARLRNLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDLWLQMLDD 764
Query: 659 GYVP 662
GY P
Sbjct: 765 GYDP 768
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/493 (31%), Positives = 250/493 (50%), Gaps = 17/493 (3%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
LEP+ TYV + AC + + GK IH + +S + + + N ++NMYGKCG L A+
Sbjct: 78 LEPS--TYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDAR 135
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
FD R+ +SW ++S Y Q G+ + +++ +SG + + S++ AC + G
Sbjct: 136 KAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAG 195
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
++ +G Q+H V K + LI++Y K ++ AS VF+ I DL +W+++I
Sbjct: 196 DIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMIT 255
Query: 252 GYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
G+ QLG EA+ LF MF G+ P+E F V A + + GRQ+ + K G
Sbjct: 256 GFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLG 315
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
F ++ D Y+K L + + F +++ D+VSWNA+IA LA+ EAI M
Sbjct: 316 RNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAA-LANSDVNEAIYFFCQM 374
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
+ G P+ T+ N+L + G Q H I+K G D + ++L+ MY KC L
Sbjct: 375 IHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNL 434
Query: 431 NDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+DA VF +S NLVSWN +L +QH EA ++ +M ++ KP++ T +L
Sbjct: 435 HDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGT 494
Query: 490 CVHIGLVEEG--WHYF---NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
C + +E G H F + ++ D +S R+ + ++A G + A ++ S
Sbjct: 495 CAELVSLEVGNQVHCFSVKSGLVVDVSVSNRL------IDMYAKCGLLKHA-RYVFDSTQ 547
Query: 545 EPNKVVWRCLLSG 557
P+ V W L+ G
Sbjct: 548 NPDIVSWSSLIVG 560
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 206/435 (47%), Gaps = 12/435 (2%)
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK-SGVAISEFSCASVLGACAVLGN 192
+D + +S S ++ C+ + L F K S + + + +++ AC + +
Sbjct: 36 YDTNYHGGELSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRS 95
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
LK G +IH + K + D + ++N+Y KC L A + F +QL + +W+ +I G
Sbjct: 96 LKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISG 155
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y+Q G+ +AI ++++M SG P ++TF ++ A + G QLH +IK G+
Sbjct: 156 YSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHH 215
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
N ++ Y+K + + F + D++SW ++I G + EA+ L +DM
Sbjct: 216 LIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFR 275
Query: 373 EG-HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
+G + PN + + ++ + + E+G+Q K G NV G +L DMYAK G L
Sbjct: 276 QGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLP 335
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
A++ F + S +LVSWN ++ A + EA+ + M + P+D TF+ +L AC
Sbjct: 336 SAKRAFYQIESPDLVSWNAIIAALANSDV-NEAIYFFCQMIHMGLMPDDITFLNLLCACG 394
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVH----LFACRGQTRRAYEFIKSSPIEPN 547
+ +G I + I +D +A+V + ++ A+ K N
Sbjct: 395 SPMTLNQGMQ-----IHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGN 449
Query: 548 KVVWRCLLSGCKTHK 562
V W +LS C HK
Sbjct: 450 LVSWNAILSACSQHK 464
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/663 (36%), Positives = 382/663 (57%), Gaps = 2/663 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF +V L+ Y K I +A+ +FD++ E+ ++W+ +I+G+++ G V+
Sbjct: 155 VVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVS 214
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + P+ Y +SAC+ GK+IH + R G E++ V N LI+
Sbjct: 215 LELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDF 274
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + + + +FD + +N ISW +++S Y Q +K+F + G F+C
Sbjct: 275 YTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFAC 334
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL +C L+ G Q+H+ K LE D+FV GLI++YAK L A +VF +
Sbjct: 335 TSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAE 394
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +++A+I GY+ K EA++LF +M PS +TF +LG A + +Q+
Sbjct: 395 QNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQI 454
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H LIIK G S F + ++D YSKC ++++ F+EM+E D+V WNA+ G+
Sbjct: 455 HGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLEN 514
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA++L + F PN +T++ ++ +S++ ++ G+Q H +VK G D + +AL
Sbjct: 515 EEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNAL 574
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAKCG + +ARK+F+ +++V WN+M+ +AQHG EAL ++ M + I+PN
Sbjct: 575 VDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNY 634
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ VLSAC H G VE+G ++FNSM GI P +H A VV L G+ A EFI+
Sbjct: 635 VTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIE 693
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
PIEP +VWR LLS C+ ++ LG+YAAE +STDP+D+ ++I+LSN++A MW +
Sbjct: 694 KMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWAD 753
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
KVR M + K+ G SW E+ NK++ F +R + D+ V++ L H+ GY
Sbjct: 754 VKKVRDRMDSSEVVKEPGRSWIEVNNKVNVF-IARDTTHREADIGSVLDILIQHIKGAGY 812
Query: 661 VPD 663
VPD
Sbjct: 813 VPD 815
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/564 (32%), Positives = 308/564 (54%), Gaps = 3/564 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + N L+ + K R+++A+ +FD+MP +N+I+WS+++S +SQ G E A
Sbjct: 53 IIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEA 112
Query: 61 LNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L F L PN + + AC G G ++HG + RSG + + +V LI+
Sbjct: 113 LMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLID 172
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y K G + A+ VFD E+ +++W ++++ Y +CG L++F R++ V +
Sbjct: 173 FYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYV 232
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+SVL AC++L L+ G QIH+ V + E D V LI+ Y KC ++ ++F +
Sbjct: 233 VSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV 292
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ ++ +W+ +I GY Q EA+ LF +M G P + VL + + GRQ
Sbjct: 293 VKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQ 352
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ IK S FV N ++D Y+K LL ++ K FD M E +V+S+NA+I G+ +
Sbjct: 353 VHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEK 412
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA+EL +M P+L T+ ++L +S+ + A+E KQ H I+K G ++ GSA
Sbjct: 413 LSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSA 472
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+D+Y+KC + DAR VF+ ++ K++V WN M GY QH EAL++YS +Q ++ KPN
Sbjct: 473 LIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPN 532
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ TF +++A ++ + G + N +++ G+ ++V ++A G A +
Sbjct: 533 EFTFAALITAASNLASLRHGQQFHNQLVK-MGLDFCPFVTNALVDMYAKCGSIEEARKMF 591
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKD 563
SS I + V W ++S H +
Sbjct: 592 NSS-IWRDVVCWNSMISTHAQHGE 614
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/491 (29%), Positives = 258/491 (52%), Gaps = 3/491 (0%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L P + + SR K IHG++ SGL+ ++ ++N LIN+ K + +A+
Sbjct: 23 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNAR 82
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVL 190
VFD +N I+W S++S Y Q G L +F+ L RKSG +EF ASV+ AC L
Sbjct: 83 VVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQL 142
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G ++ G Q+H V + + D +V LI+ Y+K ++ A VF + W+ +I
Sbjct: 143 GVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTII 202
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
GY + G++ +++LF +M + ++P S VL A + ++ GG+Q+H+ +++ G
Sbjct: 203 AGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTE 262
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
V N ++DFY+KC ++ K FD+M +++SW +I+G++ + EA++L +M
Sbjct: 263 MDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEM 322
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
G P+ + +++L A+E G+Q H +K +S+ + + L+DMYAK L
Sbjct: 323 NRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLL 382
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
DA+KVFD ++ +N++S+N M+ GY+ EALE++ M+ P+ TF+ +L
Sbjct: 383 IDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVS 442
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
+ +E + +I G+S + ++++ +++ + A + E + VV
Sbjct: 443 ASLFALELS-KQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMN-EKDIVV 500
Query: 551 WRCLLSGCKTH 561
W + G H
Sbjct: 501 WNAMFFGYTQH 511
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Query: 368 KDMLFEGHC---PNLYT----YSNILNIS-SDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
KDM E C PNL ++N+L +S S P I + K H I+ G S+ + +
Sbjct: 9 KDMEDENPCLQIPNLRPKRREFANLLQLSISRNPIIHY-KIIHGQIIVSGLQSDTFLANI 67
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK-P 478
L+++ +K R+++AR VFD + KNL++W++M+ Y+Q G EAL ++ +Q + P
Sbjct: 68 LINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHP 127
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N+ V+ AC +G+VE+G ++R G + S++ ++ G A
Sbjct: 128 NEFVLASVIRACTQLGVVEKGAQLHGFVVRS-GFDQDVYVGTSLIDFYSKNGNIEEA-RL 185
Query: 539 IKSSPIEPNKVVWRCLLSG 557
+ E V W +++G
Sbjct: 186 VFDQLSEKTAVTWTTIIAG 204
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/667 (36%), Positives = 387/667 (58%), Gaps = 6/667 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF +V L+ Y+K S D + +FDEM ERNV++W+ LISG+++ + E L
Sbjct: 124 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVL 183
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M +PN +T+ A+ A G G ++H + ++GL+ VSN LIN+Y
Sbjct: 184 TLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 243
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A+ +FD + ++ ++W S++S Y G + L +F R + V +SE S A
Sbjct: 244 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFA 303
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-L 240
S++ CA L L+ Q+H V K FD+ + L+ Y+KC + A R+F L
Sbjct: 304 SIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFL 363
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+A+I G+ Q EA+ LF +M G+ P+E T+S +L A I ++
Sbjct: 364 GNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP----VISPSEV 419
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++K + + V +LD Y K ++E+ K F +D D+V+W+A++AG+ +
Sbjct: 420 HAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGET 479
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNI-SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
AI++ ++ G PN +T+S+ILN+ ++ ++ GKQ H +K DS++ + SA
Sbjct: 480 EAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSA 539
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+ MYAK G + A +VF K+LVSWN+M+ GYAQHG +AL+++ M++ K+K +
Sbjct: 540 LLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 599
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TFIGV +AC H GLVEEG YF+ M+RD I+P +H + +V L++ GQ +A + I
Sbjct: 600 SVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 659
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ P +WR +L+ C+ HK LGR AAEKI++ PED++A+++LSN+YAE+ W
Sbjct: 660 DNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQ 719
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
E AKVRK+M E+++KK+ G SW E++NK + F + ++ + LS L D G
Sbjct: 720 ERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLG 779
Query: 660 YVPDPIY 666
Y PD Y
Sbjct: 780 YEPDTSY 786
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 163/546 (29%), Positives = 284/546 (52%), Gaps = 20/546 (3%)
Query: 24 SRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAV 83
SR+ A LFD+ P+R+ S+++L+ GFS+ G + A F + +E + + +
Sbjct: 45 SRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVL 104
Query: 84 SACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSI 143
A+ D G+++H + + G + V L++ Y K + VFD ERN +
Sbjct: 105 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVV 164
Query: 144 SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV 203
+W +L+S Y + + L +F+ + G + F+ A+ LG A G G+Q+H++V
Sbjct: 165 TWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 224
Query: 204 FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
K L+ V+ LINLY KC + A +F ++ + W+++I GYA G EA+
Sbjct: 225 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 284
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
+F M + + SE +F+ ++ A++KE QLH ++K GF + ++ Y
Sbjct: 285 GMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAY 344
Query: 324 SKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
SKC + ++L+ F E +VVSW A+I+G L + EA+ L +M +G PN +TY
Sbjct: 345 SKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTY 404
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
S IL + +P I + H +VK ++ + +G+AL+D Y K G++++A KVF + +
Sbjct: 405 SVIL---TALPVIS-PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDN 460
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC-VHIGLVEEGWH 501
K++V+W+ ML GYAQ G A++I+S + + +KPN+ TF +L+ C + +G
Sbjct: 461 KDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQ 520
Query: 502 YFNSMIRDHG--ISPRMDH----IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+ HG I R+D ++++ ++A +G A E K E + V W ++
Sbjct: 521 F-------HGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQR-EKDLVSWNSMI 572
Query: 556 SGCKTH 561
SG H
Sbjct: 573 SGYAQH 578
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 244/488 (50%), Gaps = 24/488 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + N L+ +Y+K + A+ LFD+ ++V++W+++ISG++ G+ A
Sbjct: 224 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 283
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + + ++ + CA+ + R +++H + + G + ++ L+
Sbjct: 284 LGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVA 343
Query: 121 YGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KC +L + + + N +SW +++S + Q + +F ++ GV +EF+
Sbjct: 344 YSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFT 403
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ +L A V+ ++H+ V K E V L++ Y K K+D A++VFS I
Sbjct: 404 YSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGID 459
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GR 298
D+ AWSA++ GYAQ G+ AI +F ++ G+ P+E TFS +L A ++G G+
Sbjct: 460 NKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGK 519
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q H IK S V++ +L Y+K +E + + F E D+VSWN++I+G+
Sbjct: 520 QFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHG 579
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSN 413
+A+++ K+M + T+ + + +E G++ C + P + N
Sbjct: 580 QAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN 639
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS---WNTMLVGYAQHG---LGREALE- 466
S +VD+Y++ G+L A KV D++ NL W T+L H LGR A E
Sbjct: 640 ----SCMVDLYSRAGQLEKAMKVIDNMP--NLAGSTIWRTILAACRVHKKTELGRLAAEK 693
Query: 467 IYSMMQEN 474
I +M+ E+
Sbjct: 694 IIAMIPED 701
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 183/369 (49%), Gaps = 3/369 (0%)
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
A +L A +F D ++++L+ G+++ G+ EA LF+ + G+ FS
Sbjct: 42 ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS 101
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
VL A + + + GRQLH IK GF V +++D Y K ++ FDEM E
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKER 161
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
+VV+W LI+G+ + E + L M EG PN +T++ L + ++ G Q H
Sbjct: 162 NVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 221
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
+VK G D + + ++L+++Y KCG + AR +FD K++V+WN+M+ GYA +GL
Sbjct: 222 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 281
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
EAL ++ M+ N ++ ++++F ++ C ++ + S+++ + + A +
Sbjct: 282 EALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALM 341
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH--KDLVLGRYAAEKILSTDPE 580
V C A K + N V W ++SG + K+ +G ++ K P
Sbjct: 342 VAYSKCMAML-DALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPN 400
Query: 581 DTSAHIMLS 589
+ + ++L+
Sbjct: 401 EFTYSVILT 409
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/665 (35%), Positives = 378/665 (56%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G PNV N LL +YV +N+A++LFD+ ++V+SW+ +ISG++ G+ + A N F
Sbjct: 74 GMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLF 133
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
LM LEP+ +T+V +SAC+S G+E+H R+ +GL N+ V N LI+MY KC
Sbjct: 134 TLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKC 193
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A+ VFDA R+ +SW +L +Y + G LK + + GV S + +VL
Sbjct: 194 GSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVL 253
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC L L+ G QIH+ + + D V+ L +Y KC + A VF + D+
Sbjct: 254 SACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVI 313
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
AW+ +IGG G+ EA +F +M + P VT+ +L A A G+++H+
Sbjct: 314 AWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARA 373
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K G S N +++ YSK ++++ + FD M + DVVSW AL+ G+ E+
Sbjct: 374 VKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESF 433
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
K ML +G N TY +L S+ A++WGK+ H +VK G +++ + +AL+ MY
Sbjct: 434 STFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMY 493
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG + DA +V + +S++++V+WNT++ G AQ+G G EAL+ + +M+ +++PN TF+
Sbjct: 494 FKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFV 553
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
V+SAC LVEEG F SM +D+GI P H A +V + A G A + I + P
Sbjct: 554 NVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPF 613
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+P+ +W LL+ C+ H ++ +G AAE+ L +P++ ++ LS +YA A MW + AK+
Sbjct: 614 KPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKL 673
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDP 664
RK+MKE+ +KK+ G SW E+ ++H F + + +++ + L+ + GYVPD
Sbjct: 674 RKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDT 733
Query: 665 IYSSH 669
+ H
Sbjct: 734 RFVMH 738
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 246/497 (49%), Gaps = 21/497 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G N N L+ MY K + DA+++FD M R+ +SW+ L +++ G + +
Sbjct: 171 VMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQES 230
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L + M+ + P+ TY+ +SAC S GK+IH ++ S + VS L M
Sbjct: 231 LKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKM 290
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG--EHVHGLKIFLLSRKSGVAISEF 178
Y KCG + A+ VF+ R+ I+W +++ G E HG+ F K VA
Sbjct: 291 YIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGM--FHRMLKECVAPDRV 348
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ ++L ACA G L G +IH+ K L D LIN+Y+K + A +VF +
Sbjct: 349 TYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRM 408
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +W+AL+GGYA G+ E+ F KM G+ +++T+ VL A ++ G+
Sbjct: 409 PKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGK 468
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H+ ++K G + VAN ++ Y KC +E++++ + M DVV+WN LI G +
Sbjct: 469 EIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNG 528
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG- 417
EA++ + M E PN T+ N+++ +E G++ + K D +V
Sbjct: 529 RGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRK---DYGIVPTE 585
Query: 418 ---SALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG---LGREALEIYSM 470
+ +VD+ A+ G L +A V + K + W +L HG +G +A E
Sbjct: 586 KHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAE---- 641
Query: 471 MQENKIKP-NDNTFIGV 486
Q K++P N T++ +
Sbjct: 642 -QCLKLEPQNAGTYVSL 657
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 199/388 (51%), Gaps = 2/388 (0%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
+ G + + +L +C +L VG Q+H + + ++ + ++ L+ LY C ++
Sbjct: 37 QKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVN 96
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A R+F + +W+ +I GYA G EA +LF M GL P + TF +L A +
Sbjct: 97 EARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACS 156
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
GR++H +++ G ++ V N ++ Y+KC + ++ + FD M D VSW
Sbjct: 157 SPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTT 216
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
L + S + E+++ ML EG P+ TY N+L+ + A+E GKQ H IV+
Sbjct: 217 LTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESE 276
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
S+V + +AL MY KCG + DAR+VF+ L ++++++WNTM+ G G EA ++
Sbjct: 277 HHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFH 336
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M + + P+ T++ +LSAC G + G ++D G+ + +++++++
Sbjct: 337 RMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKD-GLVSDVRFGNALINMYSKA 395
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G + A + P + + V W L+ G
Sbjct: 396 GSMKDARQVFDRMP-KRDVVSWTALVGG 422
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 154/295 (52%), Gaps = 4/295 (1%)
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
D+ + G + +L + K+ G+Q+H I++ G ++ NT+L Y
Sbjct: 30 DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
C + E+ + FD+ VVSWN +I+G+ EA L M EG P+ +T+
Sbjct: 90 VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+IL+ S A+ WG++ H +++ G +N +G+AL+ MYAKCG + DAR+VFD ++S+
Sbjct: 150 SILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR 209
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
+ VSW T+ YA+ G +E+L+ Y M + ++P+ T++ VLSAC + +E+G
Sbjct: 210 DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIH 269
Query: 504 NSMIR-DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++ +H R+ ++ ++ G + A E + P + + W ++ G
Sbjct: 270 AQIVESEHHSDVRVS--TALTKMYIKCGAVKDAREVFECLP-NRDVIAWNTMIGG 321
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/617 (37%), Positives = 356/617 (57%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G NV L+ +Y K RI+ A +FD +P RN ++W+A+I+G+SQ G VAL F
Sbjct: 167 GLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELF 226
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M + P+ + A SAC+ G G++IHG YR+ E ++ V N LI++Y KC
Sbjct: 227 GRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKC 286
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L A+ +FD+ RN +SW ++++ Y Q + +F ++G F+C S+L
Sbjct: 287 SRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSIL 346
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+C L + G Q+H+ V K LE D++V LI++YAKCE L A VF + D
Sbjct: 347 NSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAI 406
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+++A+I GYA+LG A+++F KM L PS +TF +LG + + +Q+H LI
Sbjct: 407 SYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLI 466
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K G S + + ++D YSK L++++ F M D+V WNA+I G + EA+
Sbjct: 467 VKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAV 526
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L + G PN +T+ ++ ++S + +I G+Q H I+K G DS+ I +AL+DMY
Sbjct: 527 KLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMY 586
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG + + R +F+ K+++ WN+M+ YAQHG EAL ++ MM+ ++PN TF+
Sbjct: 587 AKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFV 646
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
VLSAC H GLV+EG H+FNSM + + P +H ASVV+LF G+ A EFI+ PI
Sbjct: 647 SVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPI 706
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP +WR LLS C ++ +GRYA E L DP D+ +++SN+YA +W + K+
Sbjct: 707 EPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASKGLWADAQKL 766
Query: 605 RKIMKEKSLKKDTGCSW 621
R+ M + K+ G SW
Sbjct: 767 RQGMDCAGVVKEPGYSW 783
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/603 (30%), Positives = 310/603 (51%), Gaps = 40/603 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG P++ N LL Y K R+ DA++LFD MP RN++SW + IS ++Q G + AL
Sbjct: 57 VVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGREDDAL 116
Query: 62 NYFRLMVCCVL------EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
F PN + A+ ACA AR G+++HG + GL+ N V
Sbjct: 117 LLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGT 176
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
L+N+Y K G + +A VFDA RN ++W ++++ Y Q G+ L++F GV
Sbjct: 177 ALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRP 236
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
F AS AC+ LG ++ G QIH ++ A E D V LI+LY KC +L LA R+F
Sbjct: 237 DRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLF 296
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+++ +L +W+ +I GY Q EA+ +F ++ +G P + +L + +
Sbjct: 297 DSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIW 356
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
GRQ+H+ +IK S +V N ++D Y+KCE L E+ F+ + E D +S+NA+I G+
Sbjct: 357 QGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYA 416
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
A+E+ M + P+L T+ ++L +SS +E KQ H IVK G ++
Sbjct: 417 RLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLY 476
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
GSAL+D+Y+K ++DA+ VF + ++++V WN M+ G AQ+ G EA+++++ ++ +
Sbjct: 477 AGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSG 536
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR------DHGISPRMDHIA--------- 520
+ PN+ TF+ +++ + + G + +I+ H + +D A
Sbjct: 537 LTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGR 596
Query: 521 ---------------SVVHLFACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHK 562
S++ +A G A + ++ + +EPN V + +LS C H
Sbjct: 597 LLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSAC-AHA 655
Query: 563 DLV 565
LV
Sbjct: 656 GLV 658
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 166/567 (29%), Positives = 273/567 (48%), Gaps = 47/567 (8%)
Query: 99 HGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
H R SGL + ++N L+ Y K G L A+ +FD+ RN +SW S +S Y Q G
Sbjct: 53 HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112
Query: 159 VHGLKIFLLSRKSGVA------ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
L +F +G A +EF AS L ACA + G Q+H + K L+ +
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANV 172
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
FV L+NLYAK ++D A VF + + W+A+I GY+Q G+A A++LF +M
Sbjct: 173 FVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLD 232
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G+ P + A + + GGRQ+H + S V N ++D Y KC L +
Sbjct: 233 GVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLA 292
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
+ FD M+ ++VSW +IAG++ + EA+ + + G P+++ ++ILN +
Sbjct: 293 RRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSL 352
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
AI G+Q H ++K +S+ + +AL+DMYAKC L +AR VF+ L+ + +S+N M+
Sbjct: 353 AAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMI 412
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV-----------LSACVHIGLVEEG-- 499
GYA+ G A+EI+ M+ +KP+ TF+ + LS +H +V+ G
Sbjct: 413 EGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTS 472
Query: 500 --WHYFNSMIRDHGISPRMDHIASVVHLFACR------------GQTRRAYEFIK----- 540
+ +++I + +D V L R Q R E +K
Sbjct: 473 LDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARL 532
Query: 541 -SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI--MLSNVYAEANM 597
S + PN+ + L++ T + G+ +I+ D+ HI L ++YA+
Sbjct: 533 RVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAG-ADSDPHISNALIDMYAKCGF 591
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTEL 624
+E +++ E +L KD C W +
Sbjct: 592 IEEG----RLLFESTLGKDVIC-WNSM 613
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 163/320 (50%), Gaps = 13/320 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG ++ + L+ +Y KFS ++DA+ +F M R+++ W+A+I G +Q E A
Sbjct: 466 IVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEA 525
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F + L PN +T+V V+ ++ G++ H ++ ++G + + H+SN LI+M
Sbjct: 526 VKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDM 585
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + + +F+++L ++ I W S++S+Y Q G L +F + +GV + +
Sbjct: 586 YAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTF 645
Query: 181 ASVLGACAVLGNLKVGM-QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL ACA G + G+ +S+ K A+E ++NL+ + KL A +
Sbjct: 646 VSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMP 705
Query: 240 L-PDLTAWSALIG-----GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL---GAFAD 290
+ P T W +L+ G ++G+ + L SG PS V S + G +AD
Sbjct: 706 IEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSG--PS-VLMSNIYASKGLWAD 762
Query: 291 VKETIGGRQLHSLIIKMGFS 310
++ G ++ + G+S
Sbjct: 763 AQKLRQGMDCAGVVKEPGYS 782
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/663 (36%), Positives = 379/663 (57%), Gaps = 1/663 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF +V L+ Y K I A+ +FD++ E+ ++W+ +I+G+++ G V+
Sbjct: 63 VVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVS 122
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + P+ Y +SAC+ GK+IH + R G E++ V N LI+
Sbjct: 123 LELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDF 182
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + + + +FD + +N ISW +++S Y Q +K+F + G F+C
Sbjct: 183 YTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFAC 242
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL +C L L+ G Q+H+ K LE ++FV GLI++YAK L A +VF +
Sbjct: 243 TSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAE 302
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +++A+I GY+ K EA++LF +M PS +TF +LG A + +Q+
Sbjct: 303 QNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQI 362
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H LIIK G S F + ++D YSKC ++++ F+EM+E D+V WNA+ G+
Sbjct: 363 HGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLEN 422
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA++L + F PN +T++ ++ +S++ ++ G+Q H +VK G D + +AL
Sbjct: 423 EEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNAL 482
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAKCG + +ARK+F+ +++V WN+M+ +AQHG EAL ++ M + I+PN
Sbjct: 483 VDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNY 542
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ VLSAC H G VE+G ++FNSM GI P +H A VV L G+ A EFI+
Sbjct: 543 VTFVAVLSACSHAGXVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIE 601
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
PIEP +VWR LLS C+ ++ LG+YAAE +STDP+D+ ++I+LSN++A MW +
Sbjct: 602 KMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWAD 661
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
KVR M + K+ G SW E+ NK++ F + + V++ L H+ GY
Sbjct: 662 VKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQHIKGAGY 721
Query: 661 VPD 663
VPD
Sbjct: 722 VPD 724
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/490 (32%), Positives = 268/490 (54%), Gaps = 2/490 (0%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN + + AC G G ++HG + RSG + + +V LI+ Y K G + A+ V
Sbjct: 35 PNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLV 94
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD LE+ +++W ++++ Y +CG L++F R++ V + +SVL AC++L L
Sbjct: 95 FDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFL 154
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+ G QIH+ V + E D V LI+ Y KC ++ ++F + + ++ +W+ +I GY
Sbjct: 155 EGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGY 214
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q EA+ LF +M G P + VL + ++ GRQ+H+ IK S
Sbjct: 215 MQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNE 274
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
FV N ++D Y+K LL ++ K FD M E +V+S+NA+I G+ + EA+EL +M
Sbjct: 275 FVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVR 334
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
P+L T+ ++L +S+ + A+E KQ H I+K G ++ GSAL+D+Y+KC + DA
Sbjct: 335 LFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDA 394
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
R VF+ ++ K++V WN M GY QH EAL++YS +Q ++ KPN+ TF +++A ++
Sbjct: 395 RHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNL 454
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
+ G + N +++ G+ ++V ++A G A + SS I + V W
Sbjct: 455 ASLRHGQQFHNQLVK-MGLDFCPFVTNALVDMYAKCGSIEEARKMFNSS-IWRDVVCWNS 512
Query: 554 LLSGCKTHKD 563
++S H +
Sbjct: 513 MISTHAQHGE 522
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 215/403 (53%), Gaps = 3/403 (0%)
Query: 160 HGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
L +F+ L RKSG +EF ASV+ AC LG ++ G Q+H V + + D +V L
Sbjct: 19 EALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSL 78
Query: 219 INLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE 278
I+ Y+K +++A VF + W+ +I GY + G++ +++LF +M + ++P
Sbjct: 79 IDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDR 138
Query: 279 VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE 338
S VL A + ++ GG+Q+H+ +++ G V N ++DFY+KC ++ K FD+
Sbjct: 139 YVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQ 198
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
M +++SW +I+G++ + EA++L +M G P+ + +++L + A+E G
Sbjct: 199 MVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQG 258
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
+Q H +K +SN + + L+DMYAK L DA+KVFD ++ +N++S+N M+ GY+
Sbjct: 259 RQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQ 318
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
EALE++ M+ P+ TF+ +L + +E + +I G+S +
Sbjct: 319 EKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELS-KQIHGLIIKXGVSLDLFA 377
Query: 519 IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++++ +++ + A + E + VVW + G H
Sbjct: 378 GSALIDVYSKCSYVKDARHVFEEMN-EKDIVVWNAMFFGYTQH 419
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/664 (35%), Positives = 375/664 (56%), Gaps = 2/664 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S + P++I NH++ MY K + DA+K+FD M NV+SW+++ISG+SQ G A
Sbjct: 185 VLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDA 244
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ + M P+ T+ + AC GD G+++H + +S + N LI+M
Sbjct: 245 IIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISM 304
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
Y G + A VF ++ ISW ++++ Y Q G V L +F L R+ +EF
Sbjct: 305 YTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFI 364
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV AC+ L L+ G Q+H + K L + F L ++YAK L A F I+
Sbjct: 365 FGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIK 424
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PD+ +W+A+I +A G A EAID F +M GL P +T+ +L GRQ
Sbjct: 425 NPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQ 484
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLASC 358
+HS I+K+GF V N++L Y+KC L ++L F ++ + ++VSWNA+++ L
Sbjct: 485 IHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKK 544
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
GE L K+M F G+ P+ T + +L +++ ++ G Q HC +K G +V + +
Sbjct: 545 QEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCN 604
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+DMYAKCG L AR VFD + ++VSW++++VGYAQ GLG EAL ++ +M ++P
Sbjct: 605 GLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQP 664
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N+ T++G LSAC HIGLVEEGW + SM +HGI P +H + +V L A G A F
Sbjct: 665 NEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETF 724
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I+ S ++ + W+ LL+ CKTH ++ + A IL DP +++A +ML N++A A W
Sbjct: 725 IQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNW 784
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
+E AK+RK+MK+ ++K G SW E+++K H F + + Q ++ ++ +L + D
Sbjct: 785 EEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDD 844
Query: 659 GYVP 662
GY P
Sbjct: 845 GYDP 848
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 214/424 (50%), Gaps = 4/424 (0%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
EP+ TY V ACA+ K+IH + +S + + + N +INMYGKCG + A+
Sbjct: 157 FEPS--TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDAR 214
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD N +SW S++S Y Q G+ + +++ +SG + + SV+ AC + G
Sbjct: 215 KVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAG 274
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
++ +G Q+H+ V K LI++Y +++ AS VF+ I DL +W +I
Sbjct: 275 DIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMIT 334
Query: 252 GYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
GY QLG EA+ LF + G P+E F V A + + E G+Q+H + +K G
Sbjct: 335 GYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLR 394
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
F ++ D Y+K L + F ++ D+VSWNA+IA + EAI+ + M
Sbjct: 395 RNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQM 454
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
+ G P+ TY ++L + G+Q H IVK GFD + + ++L+ MY KC L
Sbjct: 455 IHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHL 514
Query: 431 NDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+DA VF +S + NLVSWN +L Q E +Y M + KP+ T +L
Sbjct: 515 HDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGT 574
Query: 490 CVHI 493
C +
Sbjct: 575 CAEL 578
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 193/384 (50%), Gaps = 2/384 (0%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S++ ACA +L +IH V K + + +IN+Y KC + A +VF +QL
Sbjct: 163 TSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQL 222
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
P++ +W+++I GY+Q G+A +AI ++++M SG P ++TF V+ A + GRQL
Sbjct: 223 PNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQL 282
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK F N ++ Y+ +E + F + D++SW +I G++ +
Sbjct: 283 HAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYR 342
Query: 361 GEAIELLKDMLFEG-HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA+ L +D+L +G + PN + + ++ + S + +E+GKQ H VK G NV G +
Sbjct: 343 VEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCS 402
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L DMYAK G L A+ F + + ++VSWN ++ +A +G EA++ + M + P+
Sbjct: 403 LCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPD 462
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
T+I +L C + +G +S I G + S++ ++ A
Sbjct: 463 SITYISLLCTCGSPVRLNQG-RQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVF 521
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKD 563
+ N V W +LS C K
Sbjct: 522 RDISRNANLVSWNAILSACLQKKQ 545
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 143/276 (51%), Gaps = 6/276 (2%)
Query: 227 KLDLASRVFSNI--QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYV 284
K L +FSN+ +LP ++ + +A EA D +K +S PS T++ +
Sbjct: 109 KPSLQPAIFSNLSKELPT-NSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPS--TYTSL 165
Query: 285 LGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDV 344
+ A A+ + +++H ++K + + N +++ Y KC ++++ K FD M +V
Sbjct: 166 VLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNV 225
Query: 345 VSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCC 404
VSW ++I+G+ + +AI + M G P+ T+ +++ I+ G+Q H
Sbjct: 226 VSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAH 285
Query: 405 IVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREA 464
++K F ++ +AL+ MY G++ A VF + +K+L+SW TM+ GY Q G EA
Sbjct: 286 VIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEA 345
Query: 465 LEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
L ++ ++++ +PN+ F V SAC + +E G
Sbjct: 346 LYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYG 381
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/676 (35%), Positives = 400/676 (59%), Gaps = 7/676 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQIGMPEV 59
++ SG + + N L+ +Y K A+ +F+ M +R+++SWSA++S F+ M
Sbjct: 52 LMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQ 111
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNCLI 118
A+ F M+ PN Y + + AC++ A G+ I+G + ++G LE + V LI
Sbjct: 112 AIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELI 171
Query: 119 NMYGK-CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+M+ K G L SA VFD ERN ++W +++ + Q G + +FL SG
Sbjct: 172 DMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDR 231
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE---KLDLASRV 234
F+ +SVL AC LG L +G Q+HS V + L D V L+++YAKC +D + +V
Sbjct: 232 FTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKV 291
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKA-CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
F + ++ +W+A+I Y Q G+ EAI+LF KM S + P+ +FS VL A ++ +
Sbjct: 292 FEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSD 351
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G Q++S +K+G +S V N+++ Y++ +E++ K FD + E ++VS+NA++ G
Sbjct: 352 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 411
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ + EA L ++ G + +T++++L+ ++ I A+ G+Q H ++K G+ SN
Sbjct: 412 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 471
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
I +AL+ MY++CG + A +VF+ + +N++SW +M+ G+A+HG ALE++ M E
Sbjct: 472 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 531
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
KPN+ T++ VLSAC H+G++ EG +FNSM ++HGI PRM+H A +V L G
Sbjct: 532 TGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLV 591
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A EFI S P+ + +VWR LL C+ H + LGR+AAE IL +P+D +A+I+LSN++A
Sbjct: 592 EAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHA 651
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
A W + K+RK MKE++L K+ GCSW E++N++H F + Q +++ ++QL+
Sbjct: 652 SAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLAS 711
Query: 654 HLFDGGYVPDPIYSSH 669
+ + GY+PD + H
Sbjct: 712 KIKEMGYIPDTDFVLH 727
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 159/516 (30%), Positives = 272/516 (52%), Gaps = 11/516 (2%)
Query: 54 IGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV 113
+G A + LM P+ TY + +C + + GK +H ++ +SGLEL+S V
Sbjct: 4 VGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVV 63
Query: 114 SNCLINMYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
N LI++Y KCG +A+ +F+ +R+ +SW +++S + + FL + G
Sbjct: 64 LNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 123
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCE-KLDL 230
+E+ A+V+ AC+ VG I+ V K LE D V LI+++ K L
Sbjct: 124 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 183
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
A +VF + +L W+ +I +AQLG A +AIDLF+ M SG +P T+S VL A +
Sbjct: 184 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 243
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL---LEESLKTFDEMDEHDVVSW 347
+ G+QLHS +I++G + V +++D Y+KC +++S K F++M EH+V+SW
Sbjct: 244 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 303
Query: 348 NALIAGHLASCHYG-EAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCI 405
A+I ++ S EAIEL M+ GH PN +++S++L ++ G+Q +
Sbjct: 304 TAIITAYVQSGECDKEAIELFCKMI-SGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 362
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
VK G S +G++L+ MYA+ GR+ DARK FD L KNLVS+N ++ GYA++ EA
Sbjct: 363 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 422
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
+++ + + I + TF +LS IG + +G +++ G +++ +
Sbjct: 423 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISM 481
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++ G A++ + N + W +++G H
Sbjct: 482 YSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKH 516
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/676 (35%), Positives = 400/676 (59%), Gaps = 7/676 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQIGMPEV 59
++ SG + + N L+ +Y K A+ +F+ M +R+++SWSA++S F+ M
Sbjct: 70 LMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQ 129
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNCLI 118
A+ F M+ PN Y + + AC++ A G+ I+G + ++G LE + V LI
Sbjct: 130 AIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELI 189
Query: 119 NMYGK-CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+M+ K G L SA VFD ERN ++W +++ + Q G + +FL SG
Sbjct: 190 DMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDR 249
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE---KLDLASRV 234
F+ +SVL AC LG L +G Q+HS V + L D V L+++YAKC +D + +V
Sbjct: 250 FTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKV 309
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKA-CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
F + ++ +W+A+I Y Q G+ EAI+LF KM S + P+ +FS VL A ++ +
Sbjct: 310 FEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSD 369
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G Q++S +K+G +S V N+++ Y++ +E++ K FD + E ++VS+NA++ G
Sbjct: 370 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 429
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ + EA L ++ G + +T++++L+ ++ I A+ G+Q H ++K G+ SN
Sbjct: 430 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 489
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
I +AL+ MY++CG + A +VF+ + +N++SW +M+ G+A+HG ALE++ M E
Sbjct: 490 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 549
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
KPN+ T++ VLSAC H+G++ EG +FNSM ++HGI PRM+H A +V L G
Sbjct: 550 TGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLV 609
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A EFI S P+ + +VWR LL C+ H + LGR+AAE IL +P+D +A+I+LSN++A
Sbjct: 610 EAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHA 669
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
A W + K+RK MKE++L K+ GCSW E++N++H F + Q +++ ++QL+
Sbjct: 670 SAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLAS 729
Query: 654 HLFDGGYVPDPIYSSH 669
+ + GY+PD + H
Sbjct: 730 KIKEMGYIPDTDFVLH 745
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 159/516 (30%), Positives = 272/516 (52%), Gaps = 11/516 (2%)
Query: 54 IGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV 113
+G A + LM P+ TY + +C + + GK +H ++ +SGLEL+S V
Sbjct: 22 VGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVV 81
Query: 114 SNCLINMYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
N LI++Y KCG +A+ +F+ +R+ +SW +++S + + FL + G
Sbjct: 82 LNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 141
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCE-KLDL 230
+E+ A+V+ AC+ VG I+ V K LE D V LI+++ K L
Sbjct: 142 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 201
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
A +VF + +L W+ +I +AQLG A +AIDLF+ M SG +P T+S VL A +
Sbjct: 202 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 261
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL---LEESLKTFDEMDEHDVVSW 347
+ G+QLHS +I++G + V +++D Y+KC +++S K F++M EH+V+SW
Sbjct: 262 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 321
Query: 348 NALIAGHLASCHYG-EAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCI 405
A+I ++ S EAIEL M+ GH PN +++S++L ++ G+Q +
Sbjct: 322 TAIITAYVQSGECDKEAIELFCKMI-SGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 380
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
VK G S +G++L+ MYA+ GR+ DARK FD L KNLVS+N ++ GYA++ EA
Sbjct: 381 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 440
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
+++ + + I + TF +LS IG + +G +++ G +++ +
Sbjct: 441 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISM 499
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++ G A++ + N + W +++G H
Sbjct: 500 YSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKH 534
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/665 (35%), Positives = 390/665 (58%), Gaps = 4/665 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+T + P++I NH+L MY K + +A+ +FD MP +NV+SW+++ISG+S+ G + A
Sbjct: 124 MLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNA 183
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ + M+ P+++T+ V +C+ D + +++H + +S + N LI+M
Sbjct: 184 ITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISM 243
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEF 178
Y K ++ A VF + ++ ISW S+++ + Q G + L F +LS +S +EF
Sbjct: 244 YTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLS-QSVYQPNEF 302
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S AC+ L G QIH L K L D F L ++YAKC L+ A VF +I
Sbjct: 303 VFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHI 362
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ PDL AW+A+I G+A + A E+ F +M +GL+P++VT +L A ++ G
Sbjct: 363 EKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGI 422
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLAS 357
Q+HS I+KMGF+ V N++L YSKC L ++L+ F+++ ++ D+VSWN L+ L
Sbjct: 423 QVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQ 482
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
GE + L K M P+ T +N+L S I + E G Q HC I+K G + ++ +
Sbjct: 483 NQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVS 542
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL++MY KCG L ARK+FD + + +++SW++++VGYAQ G G+EA E++ M+ +K
Sbjct: 543 NALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVK 602
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
PN+ TF+G+L+AC HIG+VEEG + +M D+ ISP +H + +V L A G A +
Sbjct: 603 PNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAED 662
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FIK P P+ VVW+ LL+ CK H +L +G+ AAE +L DP +++A +ML N++A +
Sbjct: 663 FIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGH 722
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
W + A++R M+ + K G SW E+++K+H F + ++ ++ +L + + D
Sbjct: 723 WKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQILD 782
Query: 658 GGYVP 662
G P
Sbjct: 783 DGCDP 787
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 153/501 (30%), Positives = 257/501 (51%), Gaps = 5/501 (0%)
Query: 60 ALNYFRLMVCCVLEP-NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
AL F + C P TY ++AC+S G++IH M + + + N ++
Sbjct: 81 ALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHIL 140
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+MYGKCG L A+ +FD+ +N +SW S++S Y + GE + + +++ +SG F
Sbjct: 141 SMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHF 200
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S++ +C+ L + K+ Q+H+ V K D LI++Y K ++ A VFS I
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGG 297
+ DL +W ++I G++QLG EA+ F +M S + P+E F A + + E G
Sbjct: 261 IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCG 320
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
RQ+H L IK G S F ++ D Y+KC LE + F +++ D+V+WNA+IAG +
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASV 380
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+ E+ M G PN T ++L S+ + G Q H IVK GF+ ++ +
Sbjct: 381 SNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVC 440
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
++L+ MY+KC LNDA +VF+ + +K ++VSWNT+L Q E L + +M ++I
Sbjct: 441 NSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRI 500
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+ T VL + I E G + I G++ + ++++++ G A
Sbjct: 501 KPDHVTLTNVLVSSGQIASYEVGSQ-IHCFIMKSGLNLDISVSNALINMYTKCGSLECAR 559
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
+ S P+ + W L+ G
Sbjct: 560 KMFDSIG-NPDIISWSSLIVG 579
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/655 (36%), Positives = 372/655 (56%), Gaps = 2/655 (0%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA--LNYFRLM 67
V N L+ +Y K R+ +A+ +F+ + ++V+SW+ +I+G+SQ G + + F+ M
Sbjct: 40 VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRM 99
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
PN +T+ G +A ++ DA G+ H + + V + L+NMY K GL
Sbjct: 100 RAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLT 159
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A+ VFD ERNS+SW +++S Y L +F L R+ +EF SVL A
Sbjct: 160 PEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSAL 219
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ + G QIH + K L V L+ +YAKC LD A + F + WS
Sbjct: 220 TLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWS 279
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A+I GYAQ G + +A+ LF M SG+ PSE TF V+ A +D+ G+Q+H ++K+
Sbjct: 280 AMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKL 339
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
GF S +V ++D Y+KC + ++ K FD + E D+V W ++I G++ + +A+ L
Sbjct: 340 GFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLY 399
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M EG PN T +++L S + A+E GKQ H VK GF V IGSAL MYAKC
Sbjct: 400 GRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKC 459
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G L D VF + +++++SWN M+ G +Q+G G+EALE++ MQ KP+ TF+ +L
Sbjct: 460 GCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNIL 519
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC H+GLVE GW YF M + G+ PR++H A +V + + G+ + A EF +S+ I+
Sbjct: 520 SACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHG 579
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
+WR +L C+ +++ LG YA EK++ +++SA+++LS++Y+ W++ +VR++
Sbjct: 580 MCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRM 639
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
MK + + K+ GCSW EL++ +H F Q D+H + QLS + D GY P
Sbjct: 640 MKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEP 694
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 232/427 (54%), Gaps = 3/427 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V + L+ MY K +A+K+FD MPERN +SW+ +ISG++ + AL FRLM
Sbjct: 142 DVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMR 201
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
N + + +SA +GK+IH ++GL V N L+ MY KCG L
Sbjct: 202 REEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLD 261
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A F+ S ++NSI+W ++++ Y Q G+ LK+F SG+ SEF+ V+ AC+
Sbjct: 262 DALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACS 321
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
LG G Q+H + K E +V L+++YAKC + A + F +Q PD+ W++
Sbjct: 322 DLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTS 381
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+IGGY Q G+ +A+ L+ +M G++P+E+T + VL A + + G+Q+H+ +K G
Sbjct: 382 MIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYG 441
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F + + + Y+KC L++ F M DV+SWNA+I+G + EA+EL +
Sbjct: 442 FGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFE 501
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIE--WGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+M EG P+ T+ NIL+ S + +E WG + G D V + +VD+ ++
Sbjct: 502 EMQLEGTKPDYVTFVNILSACSHMGLVERGWG-YFRMMFDEFGMDPRVEHYACMVDILSR 560
Query: 427 CGRLNDA 433
G+L +A
Sbjct: 561 AGKLKEA 567
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/467 (29%), Positives = 241/467 (51%), Gaps = 5/467 (1%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
+ GK +H ++ +S +++N L+N+Y KC L A+FVF+ ++ +SW +++ Y
Sbjct: 23 QKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGY 81
Query: 153 CQCGE--HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF 210
Q G H +++F R A + + A V A + L + G H++ K
Sbjct: 82 SQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCR 141
Query: 211 DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF 270
D FV L+N+Y K A +VF + + +W+ +I GYA A EA+ LF M
Sbjct: 142 DVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMR 201
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
+E F+ VL A + G+Q+H + +K G S V N ++ Y+KC L+
Sbjct: 202 REEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLD 261
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
++L+TF+ + + ++W+A+I G+ S +A++L M G P+ +T+ ++N S
Sbjct: 262 DALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACS 321
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
D+ A GKQ H ++K GF+S + + +ALVDMYAKC + DARK FD+L ++V W +
Sbjct: 322 DLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTS 381
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
M+ GY Q+G +AL +Y M+ I PN+ T VL AC + +E+G ++ +
Sbjct: 382 MIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVK-Y 440
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G + +++ ++A G + + P + + W ++SG
Sbjct: 441 GFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR-DVISWNAMISG 486
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 214/371 (57%), Gaps = 11/371 (2%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+L+ G +H+ + K + ++A L+NLYAKC++L A VF IQ D+ +W+ +I
Sbjct: 21 SLQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIIN 79
Query: 252 GYAQLGKACEA--IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
GY+Q G + + ++LF +M + P+ TF+ V A + + + GGR H++ IKM
Sbjct: 80 GYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDS 139
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
FV +++++ Y K L E+ K FD M E + VSW +I+G+ + EA+ L +
Sbjct: 140 CRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRL 199
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M E N + ++++L+ + + GKQ HC VK G S V +G+ALV MYAKCG
Sbjct: 200 MRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGS 259
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L+DA + F+ S KN ++W+ M+ GYAQ G +AL+++S M + I+P++ TF+GV++A
Sbjct: 260 LDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINA 319
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRG--QTRRAYEFIKSSPIEP 546
C +G EG + +++ G ++ + ++V ++A C R+ +++++ EP
Sbjct: 320 CSDLGAAWEGKQVHDYLLK-LGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQ----EP 374
Query: 547 NKVVWRCLLSG 557
+ V+W ++ G
Sbjct: 375 DIVLWTSMIGG 385
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 153/286 (53%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G V N L+ MY K ++DA + F+ ++N I+WSA+I+G++Q G + AL
Sbjct: 236 VKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKAL 295
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + P+ +T+VG ++AC+ G A GK++H + + G E +V L++MY
Sbjct: 296 KLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMY 355
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + A+ FD E + + W S++ Y Q GE+ L ++ G+ +E + A
Sbjct: 356 AKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMA 415
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SVL AC+ L L+ G QIH+ K + + L +YAKC L + VF +
Sbjct: 416 SVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR 475
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
D+ +W+A+I G +Q G EA++LF +M G P VTF +L A
Sbjct: 476 DVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSA 521
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + L+ MY K S I DA+K FD + E +++ W+++I G+ Q G E A
Sbjct: 336 LLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDA 395
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ + M + PN T + AC+S GK+IH R + G L + + L M
Sbjct: 396 LSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTM 455
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L VF R+ ISW +++S Q G L++F + G +
Sbjct: 456 YAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTF 515
Query: 181 ASVLGACAVLGNLKVGMQIHSLVF 204
++L AC+ +G ++ G ++F
Sbjct: 516 VNILSACSHMGLVERGWGYFRMMF 539
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 95/177 (53%), Gaps = 17/177 (9%)
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+++ GK H I+K S V I ++LV++YAKC RL +A+ VF+ + +K++VSWN ++
Sbjct: 21 SLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIIN 79
Query: 454 GYAQHGLGREA--LEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
GY+QHG + +E++ M+ PN +TF GV +A LV+ H
Sbjct: 80 GYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAST--LVDAAGGRLA-----HA 132
Query: 512 ISPRMDHI------ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
++ +MD +S+++++ G T A + + P E N V W ++SG + K
Sbjct: 133 VAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMP-ERNSVSWATMISGYASQK 188
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/669 (34%), Positives = 365/669 (54%), Gaps = 1/669 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ ++ L+ M++K I DA K+FD +P R++++W+++I+G ++ G + A
Sbjct: 237 ILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQA 296
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
N F+ M ++P+ +V + AC GK++H RM G + +V +++M
Sbjct: 297 CNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSM 356
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A VFD RN +SW ++++ + Q G F +SG+ + +
Sbjct: 357 YTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTF 416
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+LGAC+ LK G QI + + D V L+++YAKC L A RVF I
Sbjct: 417 MSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISK 476
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ AW+A+I Y Q + A+ F + G+ P+ TF+ +L G+ +
Sbjct: 477 QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWV 536
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H LI+K G S V+N ++ + C L + F++M + D+VSWN +IAG +
Sbjct: 537 HFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKN 596
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A + K M G P+ T++ +LN + A+ G++ H I + FD +V++G+ L
Sbjct: 597 QVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGL 656
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MY KCG + DA +VF L KN+ SW +M+ GYAQHG G+EALE++ MQ+ +KP+
Sbjct: 657 ISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDW 716
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+G LSAC H GL+EEG H+F SM ++ I PRM+H +V LF G A EFI
Sbjct: 717 ITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFII 775
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+EP+ VW LL C+ H ++ L AA+K L DP D ++LSN+YA A MW E
Sbjct: 776 KMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKE 835
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
AK+RK+M ++ + K G SW E+ K+H F + Q ++H + +L + + GY
Sbjct: 836 VAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGY 895
Query: 661 VPDPIYSSH 669
VPD Y H
Sbjct: 896 VPDTRYVLH 904
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 168/558 (30%), Positives = 306/558 (54%), Gaps = 2/558 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG P++ +N L+ MY K A+++FD+M E++V SW+ L+ G+ Q G+ E A
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
MV ++P+ T+V ++ACA + G+E++ + ++G + + V LINM+ K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + A VFD R+ ++W S+++ + G +F + GV + + S+
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L AC L+ G ++H+ + + + + +V ++++Y KC ++ A VF ++ ++
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+A+I G+AQ G+ EA F KM SG+ P+ VTF +LGA + G+Q+
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDH 438
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
II+ G+ S V +L Y+KC L+++ + F+++ + +VV+WNA+I ++ Y A
Sbjct: 439 IIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNA 498
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ + +L EG PN T+++ILN+ ++E GK H I+K G +S++ + +ALV M
Sbjct: 499 LATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSM 558
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
+ CG L A+ +F+ + ++LVSWNT++ G+ QHG + A + + MMQE+ IKP+ TF
Sbjct: 559 FVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITF 618
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
G+L+AC + EG +++I + + ++ ++ G A++ P
Sbjct: 619 TGLLNACASPEALTEG-RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP 677
Query: 544 IEPNKVVWRCLLSGCKTH 561
+ N W +++G H
Sbjct: 678 -KKNVYSWTSMITGYAQH 694
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 168/583 (28%), Positives = 290/583 (49%), Gaps = 49/583 (8%)
Query: 21 VKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYV 80
V F+ I D QK +A+++ S+ G A+ + ++ TY
Sbjct: 67 VVFADIKDTQKA------------NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYS 114
Query: 81 GAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
+ C + G+ I+ + +SG++ + + N LINMY KCG SA+ +FD E+
Sbjct: 115 ALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREK 174
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
+ SW LL Y Q G + K+ + V + + S+L ACA N+ G +++
Sbjct: 175 DVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELY 234
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
+L+ K + D FV LIN++ KC + A++VF N+ DL W+++I G A+ G+
Sbjct: 235 NLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFK 294
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
+A +LF +M G+ P +V F +L A + G+++H+ + ++G+ + +V +L
Sbjct: 295 QACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAIL 354
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
Y+KC +E++L+ FD + +VVSW A+IAG EA M+ G PN
Sbjct: 355 SMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRV 414
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T+ +IL S A++ G+Q I++ G+ S+ + +AL+ MYAKCG L DA +VF+ +
Sbjct: 415 TFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKI 474
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG- 499
S +N+V+WN M+ Y QH AL + + + IKPN +TF +L+ C +E G
Sbjct: 475 SKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGK 534
Query: 500 WHYFNSMIRDHGIS-----------------------------PRMDHIA--SVVHLFAC 528
W +F +I G+ P+ D ++ +++ F
Sbjct: 535 WVHF--LIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQ 592
Query: 529 RGQTRRAYEFIK---SSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
G+ + A+++ K S I+P+K+ + LL+ C + + L GR
Sbjct: 593 HGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGR 635
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/669 (34%), Positives = 365/669 (54%), Gaps = 1/669 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ ++ L+ M++K I DA K+FD +P R++++W+++I+G ++ G + A
Sbjct: 237 ILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQA 296
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
N F+ M ++P+ +V + AC GK++H RM G + +V +++M
Sbjct: 297 CNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSM 356
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A VFD RN +SW ++++ + Q G F +SG+ + +
Sbjct: 357 YTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTF 416
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+LGAC+ LK G QI + + D V L+++YAKC L A RVF I
Sbjct: 417 MSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISK 476
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ AW+A+I Y Q + A+ F + G+ P+ TF+ +L G+ +
Sbjct: 477 QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWV 536
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H LI+K G S V+N ++ + C L + F++M + D+VSWN +IAG +
Sbjct: 537 HFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKN 596
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A + K M G P+ T++ +LN + A+ G++ H I + FD +V++G+ L
Sbjct: 597 QVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGL 656
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MY KCG + DA +VF L KN+ SW +M+ GYAQHG G+EALE++ MQ+ +KP+
Sbjct: 657 ISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDW 716
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+G LSAC H GL+EEG H+F SM ++ I PRM+H +V LF G A EFI
Sbjct: 717 ITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFII 775
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+EP+ VW LL C+ H ++ L AA+K L DP D ++LSN+YA A MW E
Sbjct: 776 KMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKE 835
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
AK+RK+M ++ + K G SW E+ K+H F + Q ++H + +L + + GY
Sbjct: 836 VAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGY 895
Query: 661 VPDPIYSSH 669
VPD Y H
Sbjct: 896 VPDTRYVLH 904
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/558 (30%), Positives = 305/558 (54%), Gaps = 2/558 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG P++ N L+ MY K A+++FD+M E++V SW+ L+ G+ Q G+ E A
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
MV ++P+ T+V ++ACA + G+E++ + ++G + + V LINM+ K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + A VFD R+ ++W S+++ + G +F + GV + + S+
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L AC L+ G ++H+ + + + + +V ++++Y KC ++ A VF ++ ++
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+A+I G+AQ G+ EA F KM SG+ P+ VTF +LGA + G+Q+
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDH 438
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
II+ G+ S V +L Y+KC L+++ + F+++ + +VV+WNA+I ++ Y A
Sbjct: 439 IIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNA 498
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ + +L EG PN T+++ILN+ ++E GK H I+K G +S++ + +ALV M
Sbjct: 499 LATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSM 558
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
+ CG L A+ +F+ + ++LVSWNT++ G+ QHG + A + + MMQE+ IKP+ TF
Sbjct: 559 FVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITF 618
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
G+L+AC + EG +++I + + ++ ++ G A++ P
Sbjct: 619 TGLLNACASPEALTEG-RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP 677
Query: 544 IEPNKVVWRCLLSGCKTH 561
+ N W +++G H
Sbjct: 678 -KKNVYSWTSMIAGYAQH 694
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 168/583 (28%), Positives = 290/583 (49%), Gaps = 49/583 (8%)
Query: 21 VKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYV 80
V F+ I D QK +A+++ S+ G A+ + ++ TY
Sbjct: 67 VVFADIKDTQKA------------NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYS 114
Query: 81 GAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
+ C + G+ I+ + +SG++ + + N LINMY KCG SA+ +FD E+
Sbjct: 115 ALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREK 174
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
+ SW LL Y Q G + K+ + V + + S+L ACA N+ G +++
Sbjct: 175 DVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELY 234
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
+L+ K + D FV LIN++ KC + A++VF N+ DL W+++I G A+ G+
Sbjct: 235 NLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFK 294
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
+A +LF +M G+ P +V F +L A + G+++H+ + ++G+ + +V +L
Sbjct: 295 QACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAIL 354
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
Y+KC +E++L+ FD + +VVSW A+IAG EA M+ G PN
Sbjct: 355 SMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRV 414
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T+ +IL S A++ G+Q I++ G+ S+ + +AL+ MYAKCG L DA +VF+ +
Sbjct: 415 TFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKI 474
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG- 499
S +N+V+WN M+ Y QH AL + + + IKPN +TF +L+ C +E G
Sbjct: 475 SKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGK 534
Query: 500 WHYFNSMIRDHGIS-----------------------------PRMDHIA--SVVHLFAC 528
W +F +I G+ P+ D ++ +++ F
Sbjct: 535 WVHF--LIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQ 592
Query: 529 RGQTRRAYEFIK---SSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
G+ + A+++ K S I+P+K+ + LL+ C + + L GR
Sbjct: 593 HGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGR 635
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/639 (37%), Positives = 383/639 (59%), Gaps = 8/639 (1%)
Query: 38 ERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE 97
+R+++SWSALIS ++ A++ F M+ C PN Y + G AC+++ + GK
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 98 IHGRMYRSG-LELNSHVSNCLINMYGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
I G + ++G E + V LI+M+ K G L SA VFD +RN ++W +++ + Q
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G + +FL SG F+ + V+ ACA +G L +G Q H LV K L+ D V
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183
Query: 216 MGLINLYAKC---EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC--EAIDLFVKMF 270
L+++YAKC +D A +VF + + ++ +W+A+I GY Q G C EAI+LF++M
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSG-GCDREAIELFLEMV 242
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
+ P+ TFS VL A A++ + G Q+++L++KM +S V N+++ YS+C +E
Sbjct: 243 QGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNME 302
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
+ K FD + E ++VS+N ++ + S + EA EL ++ G N +T++++L+ +S
Sbjct: 303 NARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGAS 362
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
I AI G+Q H I+K GF SN+ I +AL+ MY++CG + A +VF+ + N++SW +
Sbjct: 363 SIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTS 422
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
M+ G+A+HG ALE + M E + PN+ T+I VLSAC H+GL+ EG +F SM +H
Sbjct: 423 MITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEH 482
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYA 570
GI PRM+H A VV L G A E + S P + + +V R L C+ H ++ LG++A
Sbjct: 483 GIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHA 542
Query: 571 AEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHY 630
AE IL DP D +A+I+LSN++A A W+E A++RK MKE++L K+ GCSW E++NK+H
Sbjct: 543 AEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHK 602
Query: 631 FSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
F + Q ++++ ++QL++ + + GY+P + H
Sbjct: 603 FYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLH 641
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/475 (30%), Positives = 248/475 (52%), Gaps = 10/475 (2%)
Query: 3 TSGFHPNVITYNHLLLMYVKFS-RINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
T F +V L+ M+VK + + A K+FD MP+RNV++W+ +I+ F Q+G A+
Sbjct: 71 TGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAV 130
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F MV P+ +T G VSACA G G++ H + +SGL+L+ V L++MY
Sbjct: 131 DLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMY 190
Query: 122 GKC---GLLSSAQFVFDASLERNSISWVSLLSSYCQCGE-HVHGLKIFLLSRKSGVAISE 177
KC G + A+ VFD N +SW ++++ Y Q G +++FL + V +
Sbjct: 191 AKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNH 250
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
F+ +SVL ACA L ++ +G Q+++LV K L V LI++Y++C ++ A + F
Sbjct: 251 FTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDV 310
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ +L +++ ++ YA+ + EA +LF ++ +G + TF+ +L + + G
Sbjct: 311 LFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKG 370
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
Q+HS I+K GF S + N ++ YS+C +E + + F+EM + +V+SW ++I G
Sbjct: 371 EQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKH 430
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVI 416
A+E ML G PN TY +L+ S + I G K V+ G +
Sbjct: 431 GFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEH 490
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG---LGREALEI 467
+ +VD+ + G L +A ++ + + K + + T L HG LG+ A E+
Sbjct: 491 YACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEM 545
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 7/223 (3%)
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
++ D+VSW+ALI+ + + EAI DML G PN Y ++ + S+ I GK
Sbjct: 3 NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62
Query: 400 QTHCCIVKPG-FDSNVVIGSALVDMYAKC-GRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
++K G F+S+V +G AL+DM+ K G L A KVFD + +N+V+W M+ + Q
Sbjct: 63 IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
G R+A++++ M + P+ T GV+SAC +GL+ G F+ ++ G+ +
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLG-RQFHCLVMKSGLDLDVC 181
Query: 518 HIASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
S+V ++A G A + P+ N + W +++G
Sbjct: 182 VGCSLVDMYAKCVADGSVDDARKVFDRMPVH-NVMSWTAIITG 223
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF N+ N L+ MY + I A ++F+EM + NVISW+++I+GF++ G A
Sbjct: 377 ILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRA 436
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG-KEIHGRMYRSGLELNSHVSNCLIN 119
L F M+ + PN TY+ +SAC+ G G K G+ C+++
Sbjct: 437 LETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVD 496
Query: 120 MYGKCGLLSSA 130
+ G+ G L A
Sbjct: 497 LLGRSGHLEEA 507
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/669 (34%), Positives = 365/669 (54%), Gaps = 1/669 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ ++ L+ M++K ++DA K+F+ +P R++I+W+++I+G ++ + A
Sbjct: 231 ILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQA 290
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
N F++M ++P+ +V + AC GK +H RM GL+ +V L++M
Sbjct: 291 CNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSM 350
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A VF+ RN +SW ++++ + Q G F +SG+ + +
Sbjct: 351 YTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTF 410
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+LGAC+ LK G QIH + K D V L+++YAKC L A VF I
Sbjct: 411 MSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISK 470
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ AW+A+I Y Q K A+ F + G+ P TF+ +L G+ +
Sbjct: 471 QNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWV 530
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
SLII+ GF S + N ++ + C L ++ F++M E D+VSWN +IAG +
Sbjct: 531 QSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGEN 590
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A + K M G P+ T++ +LN + A+ G++ H I + D +VV+G+ L
Sbjct: 591 QFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGL 650
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MY KCG ++DA VF +L KN+ SW +M+ GYAQHG G+EALE++ MQ+ +KP+
Sbjct: 651 ISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDW 710
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+G LSAC H GL++EG H+F SM +D I PRM+H +V LF G A EFI
Sbjct: 711 ITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFIN 769
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
++P+ +W LL C+ H D+ L A+K L DP D +++LSN+YA A MW E
Sbjct: 770 KMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKE 829
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
K+RK+M ++ + K G SW E+ ++H F + Q ++H + +L + + GY
Sbjct: 830 VTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGY 889
Query: 661 VPDPIYSSH 669
VPD Y H
Sbjct: 890 VPDTRYVLH 898
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 171/558 (30%), Positives = 304/558 (54%), Gaps = 2/558 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S P++ +N L+ MY K N A+++FDEMP+++V SW+ L+ G+ Q E A
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
MV ++P+ YT+V ++ACA + G E+ + +G + + V LINM+ K
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIK 252
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + A VF+ R+ I+W S+++ + + +F + + GV + + S+
Sbjct: 253 CGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL 312
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L AC L+ G ++H+ + + L+ + +V L+++Y KC ++ A VF+ ++ ++
Sbjct: 313 LKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNV 372
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+A+I G+AQ G+ EA F KM SG+ P+ VTF +LGA + GRQ+H
Sbjct: 373 VSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDR 432
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
IIK G+ + V +L Y+KC L ++ F+ + + +VV+WNA+I ++ Y A
Sbjct: 433 IIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNA 492
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ + +L EG P+ T+++ILN+ A+E GK I++ GF+S++ I +ALV M
Sbjct: 493 VATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSM 552
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
+ CG L A +F+ + ++LVSWNT++ G+ QHG + A + + MMQE+ +KP+ TF
Sbjct: 553 FVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITF 612
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
G+L+AC + EG +++I + + + ++ ++ G A+ + P
Sbjct: 613 TGLLNACASPEALTEG-RRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP 671
Query: 544 IEPNKVVWRCLLSGCKTH 561
+ N W +++G H
Sbjct: 672 -KKNVYSWTSMITGYAQH 688
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 151/523 (28%), Positives = 263/523 (50%), Gaps = 2/523 (0%)
Query: 39 RNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEI 98
+N +A ++ S+ G A+ + ++ + TY + C + G+ I
Sbjct: 67 KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126
Query: 99 HGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
H + S ++ + + N LI+MY KCG +SA+ +FD +++ SW LL Y Q +
Sbjct: 127 HNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY 186
Query: 159 VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
++ + GV +++ +L ACA N+ G ++ SL+ + D FV L
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTAL 246
Query: 219 INLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE 278
IN++ KC +D A +VF+N+ DL W+++I G A+ + +A +LF M G+ P +
Sbjct: 247 INMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDK 306
Query: 279 VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE 338
V F +L A + G+++H+ + ++G + +V +L Y+KC +E++L+ F+
Sbjct: 307 VAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNL 366
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
+ +VVSW A+IAG EA M+ G PN T+ +IL S A++ G
Sbjct: 367 VKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQG 426
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
+Q H I+K G+ ++ + +AL+ MYAKCG L DAR VF+ +S +N+V+WN M+ Y QH
Sbjct: 427 RQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQH 486
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
A+ + + + IKP+ +TF +L+ C +E G + S+I G +
Sbjct: 487 EKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESDLHI 545
Query: 519 IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++V +F G A P E + V W +++G H
Sbjct: 546 RNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQH 587
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 217/425 (51%), Gaps = 6/425 (1%)
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQI 199
+N+ + L+ + G+ + + L + I + +S+L C NL G +I
Sbjct: 67 KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
H+ + ++ D F+ LI++YAKC + A ++F + D+ +W+ L+GGY Q +
Sbjct: 127 HNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY 186
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
EA L +M G+ P + TF Y+L A AD K G +L SLI+ G+ + FV +
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTAL 246
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
++ + KC ++++LK F+ + D+++W ++I G + +A L + M EG P+
Sbjct: 247 INMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDK 306
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
+ ++L + A+E GK+ H + + G D+ + +G+AL+ MY KCG + DA +VF+
Sbjct: 307 VAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNL 366
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ +N+VSW M+ G+AQHG EA ++ M E+ I+PN TF+ +L AC +++G
Sbjct: 367 VKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQG 426
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRG--QTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ +I+ I+ A + C R +E I N V W +++
Sbjct: 427 RQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQ----NVVAWNAMITA 482
Query: 558 CKTHK 562
H+
Sbjct: 483 YVQHE 487
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/665 (34%), Positives = 381/665 (57%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V N L+ MY + + A++LF MP+R++ISW+A+I+G+++ A+ +
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLY 419
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M ++P T++ +SACA+ GK IH + RSG++ N H++N L+NMY +C
Sbjct: 420 KQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRC 479
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L AQ VF+ + R+ ISW S+++ + Q G + K+F + + + ASVL
Sbjct: 480 GSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVL 539
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C L++G QIH + + L+ D + LIN+Y +C L A VF ++Q D+
Sbjct: 540 SGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVM 599
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+A+IGG A G+ +AI+LF +M + G P + TFS +L G+++ + I
Sbjct: 600 SWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYI 659
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+ G+ T V N ++ YSK + ++ + FD+M D+VSWN +IAG+ + A+
Sbjct: 660 LNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAV 719
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
E M + PN +++ ++LN S A+E GK+ H IVK +V +G+AL+ MY
Sbjct: 720 EFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMY 779
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG +A++VFD++ KN+V+WN M+ YAQHGL +AL ++ M++ IKP+ +TF
Sbjct: 780 AKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFT 839
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
+LSAC H GLV EG+ F+SM ++G+ P ++H +V L + + A I P
Sbjct: 840 SILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPF 899
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
P+ VW LL C+ H ++ L +AA L + + + +I+LSNVYA A WD+ AK+
Sbjct: 900 PPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKI 959
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDP 664
R++M+ + ++K+ G SW E+ N +H F + + + +++ + +LSV + + GY PD
Sbjct: 960 RRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDT 1019
Query: 665 IYSSH 669
+ H
Sbjct: 1020 QHVLH 1024
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 171/559 (30%), Positives = 298/559 (53%), Gaps = 4/559 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ + P++ N L+ MYVK + DA ++F EMP R+VISW++LIS ++Q G + A
Sbjct: 53 MVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKA 112
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M PN TY+ ++AC S + +GK+IH ++ ++G + + V N L++M
Sbjct: 113 FQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSM 172
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG L A+ VF R+ +S+ ++L Y Q L +F G++ + +
Sbjct: 173 YGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTY 232
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++L A L G +IH L + L D V L+ + +C +D A + F
Sbjct: 233 INLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTAD 292
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ ++ALI AQ G EA + + +M S G+ + T+ +L A + K G+ +
Sbjct: 293 RDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLI 352
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS I + G SS + N ++ Y++C L ++ + F M + D++SWNA+IAG+
Sbjct: 353 HSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDR 412
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
GEA+ L K M EG P T+ ++L+ ++ A GK H I++ G SN + +AL
Sbjct: 413 GEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANAL 472
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
++MY +CG L +A+ VF+ +++++SWN+M+ G+AQHG A +++ MQ +++P++
Sbjct: 473 MNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF VLS C + +E G + I + G+ ++ ++++++ G + A
Sbjct: 533 ITFASVLSGCKNPEALELGKQ-IHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFH 591
Query: 541 SSPIEPNKVV-WRCLLSGC 558
S ++ V+ W ++ GC
Sbjct: 592 S--LQHRDVMSWTAMIGGC 608
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 181/647 (27%), Positives = 315/647 (48%), Gaps = 34/647 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G+ + N LL MY K + A+++F + R+V+S++ ++ ++Q +
Sbjct: 154 IIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKEC 213
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + P+ TY+ + A + GK IH GL + V L+ M
Sbjct: 214 LGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTM 273
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+CG + SA+ F + +R+ + + +L+++ Q G +V + + R GVA++ +
Sbjct: 274 CVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTY 333
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L AC+ L+ G IHS + + D + LI++YA+C L A +F +
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPK 393
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL +W+A+I GYA+ EA+ L+ +M S G+ P VTF ++L A A+ G+ +
Sbjct: 394 RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMI 453
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H I++ G S +AN +++ Y +C L E+ F+ DV+SWN++IAGH Y
Sbjct: 454 HEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY 513
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A +L ++M E P+ T++++L+ + A+E GKQ H I + G +V +G+AL
Sbjct: 514 ETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNAL 573
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
++MY +CG L DAR VF L ++++SW M+ G A G +A+E++ MQ +P
Sbjct: 574 INMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVK 633
Query: 481 NTFIGVLSACVHIGLVEEGWHYF---------------NSMIRDHGIS------------ 513
+TF +L C ++EG N++I + S
Sbjct: 634 STFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDK 693
Query: 514 -PRMDHIA--SVVHLFACRGQTRRAYEF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLG 567
P D ++ ++ +A G + A EF ++ + PNK + LL+ C + L G
Sbjct: 694 MPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEG 753
Query: 568 -RYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
R AE + D L ++YA+ E +V + EK++
Sbjct: 754 KRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNV 800
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/560 (28%), Positives = 287/560 (51%), Gaps = 2/560 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G + ++ L+ M V+ ++ A++ F +R+V+ ++ALI+ +Q G A
Sbjct: 256 VEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAF 315
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M + N TY+ ++AC++ +GK IH + G + + N LI+MY
Sbjct: 316 EQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMY 375
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+CG L A+ +F +R+ ISW ++++ Y + + ++++ + GV +
Sbjct: 376 ARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFL 435
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L ACA G IH + + ++ + +A L+N+Y +C L A VF Q
Sbjct: 436 HLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR 495
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W+++I G+AQ G A LF +M + L P +TF+ VL + + G+Q+H
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIH 555
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
I + G + N +++ Y +C L+++ F + DV+SW A+I G
Sbjct: 556 GRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDM 615
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+AIEL M EG P T+S+IL + + ++ GK+ I+ G++ + +G+AL+
Sbjct: 616 KAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALI 675
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
Y+K G + DAR+VFD + S+++VSWN ++ GYAQ+GLG+ A+E MQE + PN
Sbjct: 676 SAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKF 735
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
+F+ +L+AC +EEG +++ + + A+++ ++A G A E
Sbjct: 736 SFVSLLNACSSFSALEEGKRVHAEIVK-RKLQGDVRVGAALISMYAKCGSQGEAQEVF-D 793
Query: 542 SPIEPNKVVWRCLLSGCKTH 561
+ IE N V W +++ H
Sbjct: 794 NIIEKNVVTWNAMINAYAQH 813
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 257/530 (48%), Gaps = 35/530 (6%)
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
E TYV + C + K IH +M + + + +SN LINMY KC + A
Sbjct: 24 ETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VF R+ ISW SL+S Y Q G ++F + +G ++ + S+L AC
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L+ G +IHS + K + D V L+++Y KC L A +VF+ I D+ +++ ++G
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
YAQ E + LF +M S G+ P +VT+ +L AF G+++H L ++ G +S
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD 263
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V ++ +C ++ + + F + DVV +NALIA H EA E M
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRS 323
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+G N TY +ILN S A+E GK H I + G S+V IG+AL+ MYA+CG L
Sbjct: 324 DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPK 383
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
AR++F + ++L+SWN ++ GYA+ EA+ +Y MQ +KP TF+ +LSAC +
Sbjct: 384 ARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACAN 443
Query: 493 IGLVEEGWHYFNSMIRD-----------------------------HGISPRMDHIA--S 521
+G ++R G R D I+ S
Sbjct: 444 SSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNS 502
Query: 522 VVHLFACRGQTRRAYEF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
++ A G AY+ +++ +EP+ + + +LSGCK + L LG+
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGK 552
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 223/461 (48%), Gaps = 2/461 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG N N L+ MY + + +AQ +F+ R+VISW+++I+G +Q G E A
Sbjct: 457 ILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETA 516
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F+ M LEP+ T+ +S C + GK+IHGR+ SGL+L+ ++ N LINM
Sbjct: 517 YKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINM 576
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG L A+ VF + R+ +SW +++ GE + +++F + G + +
Sbjct: 577 YIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTF 636
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L C L G ++ + + E D V LI+ Y+K + A VF +
Sbjct: 637 SSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPS 696
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+ +I GYAQ G A++ +M ++P++ +F +L A + G+++
Sbjct: 697 RDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRV 756
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ I+K V ++ Y+KC E+ + FD + E +VV+WNA+I +
Sbjct: 757 HAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLA 816
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
+A+ M EG P+ T+++IL+ + + G Q + G +
Sbjct: 817 SKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGC 876
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
LV + + R +A + + + + W T+L HG
Sbjct: 877 LVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHG 917
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/665 (35%), Positives = 389/665 (58%), Gaps = 4/665 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+T + P++I NH+L MY K + +A+ +FD MP +NV+SW+++ISG+S+ G + A
Sbjct: 124 MLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNA 183
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ + M+ P+++T+ V +C+ D + +++H + +S + N LI+M
Sbjct: 184 ITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISM 243
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEF 178
Y K ++ A VF + ++ ISW S+++ + Q G + L F +LS +S +EF
Sbjct: 244 YTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLS-QSVYQPNEF 302
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S AC+ L G QIH L K L D F L ++YAKC L+ A VF +I
Sbjct: 303 VFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHI 362
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ PDL AW+A+I G+A + A E+ F +M +GL+P++VT +L A ++ G
Sbjct: 363 EKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGI 422
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLAS 357
Q+HS I+KMGF+ V N++L YSKC L ++L+ F+++ ++ D+VSWN L+ L
Sbjct: 423 QVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQ 482
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
GE + L K M P+ T +N+L S I + E G Q HC I+K G + ++ +
Sbjct: 483 NQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVS 542
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL++MY KCG L ARK+FD + + +++SW++++VGYAQ G G+EA E++ M+ +K
Sbjct: 543 NALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVK 602
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
PN+ TF+G+L+AC HIG+VEEG + +M D+ ISP +H + +V L A G A +
Sbjct: 603 PNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAED 662
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FI+ P P+ VVW+ LL+ CK H +L +G+ AAE +L DP +++A +ML N++A +
Sbjct: 663 FIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGH 722
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
W + A++R M+ + K G SW E+++K+H F + ++ ++ +L + + D
Sbjct: 723 WKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQILD 782
Query: 658 GGYVP 662
P
Sbjct: 783 DSCDP 787
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 153/501 (30%), Positives = 257/501 (51%), Gaps = 5/501 (0%)
Query: 60 ALNYFRLMVCCVLEP-NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
AL F + C P TY ++AC+S G++IH M + + + N ++
Sbjct: 81 ALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHIL 140
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+MYGKCG L A+ +FD+ +N +SW S++S Y + GE + + +++ +SG F
Sbjct: 141 SMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHF 200
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S++ +C+ L + K+ Q+H+ V K D LI++Y K ++ A VFS I
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGG 297
+ DL +W ++I G++QLG EA+ F +M S + P+E F A + + E G
Sbjct: 261 IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCG 320
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
RQ+H L IK G S F ++ D Y+KC LE + F +++ D+V+WNA+IAG +
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASV 380
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+ E+ M G PN T ++L S+ + G Q H IVK GF+ ++ +
Sbjct: 381 SNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVC 440
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
++L+ MY+KC LNDA +VF+ + +K ++VSWNT+L Q E L + +M ++I
Sbjct: 441 NSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRI 500
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+ T VL + I E G + I G++ + ++++++ G A
Sbjct: 501 KPDHVTLTNVLVSSGQIASYEVGSQ-IHCFIMKSGLNLDISVSNALINMYTKCGSLECAR 559
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
+ S P+ + W L+ G
Sbjct: 560 KMFDSIG-NPDIISWSSLIVG 579
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/670 (35%), Positives = 372/670 (55%), Gaps = 2/670 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G PNV N LL +Y +N+A++LFD+ ++V+SW+ +ISG++ G+ + A
Sbjct: 54 ILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEA 113
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
N F LM LEP+ +T+V +SAC+S G+EIH R+ +GL ++ V N LI+M
Sbjct: 114 FNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISM 173
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A+ VFDA R+ +SW +L +Y + G LK + + V S +
Sbjct: 174 YAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITY 233
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL AC L L+ G QIH+ + + D V+ L +Y KC A VF +
Sbjct: 234 MNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSY 293
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ AW+ +I G+ G+ EA F +M G+ P T++ VL A A G+++
Sbjct: 294 RDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEI 353
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC-H 359
H+ K G S N +++ YSK ++++ + FD M + DVVSW L+ G A C
Sbjct: 354 HARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLL-GRYADCDQ 412
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
E+ K ML +G N TY +L S+ A++WGK+ H +VK G +++ + +A
Sbjct: 413 VVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNA 472
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+ MY KCG + DA +VF+ +S +++V+WNT++ G Q+G G EAL+ Y +M+ ++PN
Sbjct: 473 LMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPN 532
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ VLSAC LVEEG F M +D+GI P H A +V + A G R A + I
Sbjct: 533 AATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVI 592
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ P++P+ +W LL+ C+ H ++ +G AAE L +P++ ++ LS +YA A MW
Sbjct: 593 LTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWR 652
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ AK+RK MKE+ +KK+ G SW E+ ++H F + + +++ + L + G
Sbjct: 653 DVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLG 712
Query: 660 YVPDPIYSSH 669
YVPD + H
Sbjct: 713 YVPDTRFVMH 722
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/518 (28%), Positives = 249/518 (48%), Gaps = 37/518 (7%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
Y YV + +C D GK++H + R G++ N +++N L+ +Y CG ++ A+ +FD
Sbjct: 29 YDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDK 88
Query: 137 SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
++ +SW ++S Y G +F L ++ + +F+ S+L AC+ L G
Sbjct: 89 FSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWG 148
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
+IH V + L D V LI++YAKC + A RVF + D +W+ L G YA+
Sbjct: 149 REIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAES 208
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
G E++ + M + PS +T+ VL A + G+Q+H+ I++ + S V+
Sbjct: 209 GYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVS 268
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
+ Y KC +++ + F+ + DV++WN +I G + S EA ML EG
Sbjct: 269 TALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVA 328
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ TY+ +L+ + + GK+ H K G S+V G+AL++MY+K G + DAR+V
Sbjct: 329 PDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQV 388
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC------ 490
FD + +++VSW T+L YA E+ + M + +K N T++ VL AC
Sbjct: 389 FDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVAL 448
Query: 491 -----VHIGLVEEGW------------HYFN-SMIRD-----HGISPRMDHIASVVHLFA 527
+H +V+ G YF + D G+S M + + L
Sbjct: 449 KWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMS--MRDVVTWNTLIG 506
Query: 528 CRGQTRRA------YEFIKSSPIEPNKVVWRCLLSGCK 559
GQ R YE +KS + PN + +LS C+
Sbjct: 507 GLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACR 544
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 202/401 (50%), Gaps = 13/401 (3%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
+ G + + +L +C +L VG Q+H + +C ++ + ++ L+ LYA C ++
Sbjct: 21 RKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVN 80
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A ++F + +W+ +I GYA G A EA +LF M L P + TF +L A +
Sbjct: 81 EARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACS 140
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
GR++H +++ G ++ T V N ++ Y+KC + ++ + FD M D VSW
Sbjct: 141 SPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTT 200
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
L + S + E+++ ML E P+ TY N+L+ + A+E GKQ H IV+
Sbjct: 201 LTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESE 260
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ S+V + +AL MY KCG DAR+VF+ LS +++++WNTM+ G+ G EA +
Sbjct: 261 YHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFH 320
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M E + P+ T+ VLSAC G + G +D G+ + +++++++
Sbjct: 321 RMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKD-GLVSDVRFGNALINMYSKA 379
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYA 570
G + A + P + + V W L LGRYA
Sbjct: 380 GSMKDARQVFDRMP-KRDVVSWTTL-----------LGRYA 408
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/668 (35%), Positives = 389/668 (58%), Gaps = 6/668 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF ++ N L+ +YV+ A+KLFDEMP+RN ++W+ LISG++Q GMPE A
Sbjct: 26 VLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDA 85
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACA-SRGDARSGKEIHGRMYRSGL-ELNSHVSNCLI 118
+ M+ PN + + A+ AC S R G+++HG R+GL + V N LI
Sbjct: 86 CGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLI 145
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
NMY KCG + A+ VF ++++S+SW S+++ Q +K + RK+G+ S F
Sbjct: 146 NMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNF 205
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S L +CA LG + +G Q H K L+ D V+ L+ LYA+ +L +VFS +
Sbjct: 206 ALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWM 265
Query: 239 QLPDLTAWSALIGGYAQLGKAC-EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
D +W+ +IG A G + EAI++F++M +G P+ VTF +L + + +
Sbjct: 266 LERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLS 325
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLA 356
Q+H+LI+K + N +L Y K +E + F M E D VSWN++I+G++
Sbjct: 326 HQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIH 385
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ +A++L+ M+ G + +T++ +L+ + + +E G + H C ++ +S+VVI
Sbjct: 386 NELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVI 445
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
GSALVDMY+KCGR++ A + F+ + +NL SWN+M+ GYA+HG G AL +++ M+ +
Sbjct: 446 GSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQ 505
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P+ TF+GVLSAC HIGLV+EG+ YF SM +G+ PR++H + +V L G+ +
Sbjct: 506 LPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIE 565
Query: 537 EFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
FI PI+PN ++WR +L C + LGR AAE + + DP++ +++LSN+YA
Sbjct: 566 NFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYAS 625
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
W++ A+ R+ M+E ++KK+ GCSW +++ +H F + + ++ + +L
Sbjct: 626 GGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKK 685
Query: 655 LFDGGYVP 662
+ D GYVP
Sbjct: 686 IRDAGYVP 693
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 140/469 (29%), Positives = 225/469 (47%), Gaps = 10/469 (2%)
Query: 99 HGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
H + + G + + + N LIN+Y + G SA+ +FD +RN ++W L+S Y Q G
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 159 VHGLKIFLLSRKSGVAISEFSCASVLGAC--AVLGNLKVGMQIHSLVFKCALEFDKF-VA 215
+ G + F+ S + AC ++L K G Q+H + L K V
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRK-GRQVHGYAIRTGLNDAKVAVG 141
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
GLIN+YAKC +D A VF + D +W+++I G Q +A+ + M +GLM
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
PS L + A + + G+Q H IK+G V+NT+L Y++ L E K
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKV 261
Query: 336 FDEMDEHDVVSWNALIAGHLAS--CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
F M E D VSWN +I G LA EAIE+ +M+ G PN T+ N+L S +
Sbjct: 262 FSWMLERDQVSWNTVI-GALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLS 320
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS-KNLVSWNTML 452
+ Q H I+K + I +AL+ Y K G + + ++F +S ++ VSWN+M+
Sbjct: 321 TSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI 380
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
GY + L +A+++ +M + + + TF VLSAC + +E G IR +
Sbjct: 381 SGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIR-ACL 439
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ +++V +++ G+ A F P+ N W ++SG H
Sbjct: 440 ESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR-NLYSWNSMISGYARH 487
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 36/246 (14%)
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H ++K GFDS++ + + L+++Y + G ARK+FD + +N V+W ++ GY Q+G+
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSAC-----------------VHIGLVEEGWHYFN 504
+A + M PN F + AC + GL + N
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142
Query: 505 SMIRDHGISPRMDHIASVVHLFA------------------CRGQTRRAYEFIKSSPIEP 546
+I + +DH SV L C ++Y ++ + + P
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYA-AEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVR 605
+ LS C + ++LG+ E I D S L +YAE + E KV
Sbjct: 203 SNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVF 262
Query: 606 KIMKEK 611
M E+
Sbjct: 263 SWMLER 268
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/663 (36%), Positives = 371/663 (55%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G ++ N LL YVK+ + DA KLFDEMP+RN +S+ LI G+SQ A
Sbjct: 70 IIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEA 129
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F + E N + + + S A+ G +H +Y+ G + ++ V LI+
Sbjct: 130 IGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDC 189
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y CG A+ VFDA ++ +SW +++ Y + LK+F R G + F+
Sbjct: 190 YSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTF 249
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASVL AC L VG +H FK + + FV + LI+LY K +D A +VF +
Sbjct: 250 ASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPK 309
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ WS +I YAQ ++ EAI++F +M ++P++ T + +L A A + + G Q+
Sbjct: 310 DDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQI 369
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H ++K+G FV+N ++D Y+KC +E SL+ F E VSWN +I G++ + +
Sbjct: 370 HCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNG 429
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A+ L KDML TYS++L + I A+E G Q H VK +D N V+G+AL
Sbjct: 430 EKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNAL 489
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMYAKCG + DAR VFD L + VSWN M+ GY+ HGL EAL+ + M E + KP+
Sbjct: 490 IDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDK 549
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+G+LSAC + GL++ G YF SM+ ++ I P +H +V L G +A + +
Sbjct: 550 VTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVH 609
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
P EP+ +VWR LLS C H D+ LGR +A+++L +PED + H++LSN+YA A W
Sbjct: 610 EIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGN 669
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
A +R MK K ++K+ G SW E Q ++HYFS + ++ ++ L++ + GY
Sbjct: 670 VASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGY 729
Query: 661 VPD 663
VPD
Sbjct: 730 VPD 732
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/493 (30%), Positives = 250/493 (50%), Gaps = 10/493 (2%)
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
E N Y Y + +C GD +GK +H + + G L+ +N L+N Y K L A
Sbjct: 41 EFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAK 100
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
+FD +RN++S+V+L+ Y QC + +F + G ++ F ++VL
Sbjct: 101 LFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEW 160
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
K+G +H+ V+K + D FV LI+ Y+ C + A +VF I+ D+ +W+ ++
Sbjct: 161 AKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVAC 220
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y + E++ LF +M G P+ TF+ VL A ++ G+ +H K +
Sbjct: 221 YVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEE 280
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
FV ++D Y K ++++L+ F+EM + DV+ W+ +IA + S EAIE+ M
Sbjct: 281 LFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRR 340
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
PN +T +++L + + ++ G Q HC +VK G D NV + +AL+DMYAKCGR+ +
Sbjct: 341 GLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMEN 400
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
+ ++F + VSWNT++VGY Q G G +AL ++ M E +++ + T+ VL AC
Sbjct: 401 SLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAG 460
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASV----VHLFACRGQTRRAYEFIKSSPIEPNK 548
I +E G S I + D V + ++A G + A + E ++
Sbjct: 461 IAALEPG-----SQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDA-RLVFDMLREHDQ 514
Query: 549 VVWRCLLSGCKTH 561
V W ++SG H
Sbjct: 515 VSWNAMISGYSVH 527
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/655 (34%), Positives = 380/655 (58%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N +L MY K I++A+++FD+M ++V+SW+ +I G++ G E+A F+ M
Sbjct: 278 DVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQ 337
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ PN TY+ ++A + + GK +H + +G E + V L+ MY KCG
Sbjct: 338 QEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYK 397
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+ VF+ + R+ I+W +++ + G +I+ ++ G+ ++ + +L AC
Sbjct: 398 DCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACV 457
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L G +IHS V K FD V LI++YA+C + A +F+ + D+ +W+A
Sbjct: 458 NPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTA 517
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+IGG A+ G EA+ +F M +GL P+ VT++ +L A + GR++H +I+ G
Sbjct: 518 MIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAG 577
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
++ VANT+++ YS C ++++ + FD M + D+V++NA+I G+ A EA++L
Sbjct: 578 LATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFD 637
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+ EG P+ TY N+LN ++ ++EW K+ H ++K G+ S+ +G+ALV YAKCG
Sbjct: 638 RLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCG 697
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+DA VFD + +N++SWN ++ G AQHG G++ L+++ M+ IKP+ TF+ +LS
Sbjct: 698 SFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLS 757
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H GL+EEG YF SM RD GI+P ++H +V L GQ IK+ P + N
Sbjct: 758 ACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANT 817
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
+W LL C+ H ++ + AAE L DP++ + ++ LS++YA A MWD AK+RK+M
Sbjct: 818 RIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLM 877
Query: 609 KEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+++ + K+ G SW E+ +K+HYF + + ++ +++L+ + GYVPD
Sbjct: 878 EQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPD 932
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 302/552 (54%), Gaps = 4/552 (0%)
Query: 12 TYNHLLLMYVKFSRINDAQKLFDEM--PERNVISWSALISGFSQIGMPEVALNYFRLMVC 69
T N L+ MY++ I +A+++++++ ER V SW+A++ G+ Q G E AL R M
Sbjct: 178 TVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQ 237
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
L T + +S+C S G+EIH ++ L + +V+NC++NMY KCG +
Sbjct: 238 HGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHE 297
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A+ VFD ++ +SW ++ Y CG +IF ++ GV + + +VL A +
Sbjct: 298 AREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSG 357
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
LK G +HS + E D V L+ +YAKC +VF + DL AW+ +
Sbjct: 358 PAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTM 417
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
IGG A+ G EA +++ +M G+MP+++T+ +L A + GR++HS ++K GF
Sbjct: 418 IGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGF 477
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
V N ++ Y++C ++++ F++M D++SW A+I G S EA+ + +D
Sbjct: 478 MFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQD 537
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M G PN TY++ILN S A++WG++ H +++ G ++ + + LV+MY+ CG
Sbjct: 538 MQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGS 597
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ DAR+VFD ++ +++V++N M+ GYA H LG+EAL+++ +QE +KP+ T+I +L+A
Sbjct: 598 VKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNA 657
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C + G +E + +++D +S A V C + F K ++ N +
Sbjct: 658 CANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM--MKRNVI 715
Query: 550 VWRCLLSGCKTH 561
W ++ GC H
Sbjct: 716 SWNAIIGGCAQH 727
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/498 (29%), Positives = 260/498 (52%), Gaps = 7/498 (1%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
N Y+ + C D +G+E+H + + L+ + N LINMY +CG + A+ V+
Sbjct: 140 NSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVW 199
Query: 135 DA--SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
+ ER SW +++ Y Q G LK+ ++ G+A+ + +L +C
Sbjct: 200 NKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSA 259
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L+ G +IH K L FD VA ++N+YAKC + A VF ++ + +W+ +IGG
Sbjct: 260 LECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGG 319
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
YA G + A ++F KM G++P+ +T+ VL AF+ G+ +HS I+ G S
Sbjct: 320 YADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESD 379
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V ++ Y+KC ++ + F+++ D+++WN +I G ++ EA E+ M
Sbjct: 380 LAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQR 439
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EG PN TY +LN + A+ WG++ H +VK GF ++ + +AL+ MYA+CG + D
Sbjct: 440 EGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKD 499
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
AR +F+ + K+++SW M+ G A+ GLG EAL ++ MQ+ +KPN T+ +L+AC
Sbjct: 500 ARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSS 559
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
++ G +I + G++ ++V++++ G + A + + + V +
Sbjct: 560 PAALDWGRRIHQQVI-EAGLATDAHVANTLVNMYSMCGSVKDARQVF-DRMTQRDIVAYN 617
Query: 553 CLLSGCKTHKDLVLGRYA 570
++ G H LG+ A
Sbjct: 618 AMIGGYAAHN---LGKEA 632
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 240/461 (52%), Gaps = 2/461 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G ++ L+ MY K D +++F+++ R++I+W+ +I G ++ G E A
Sbjct: 371 ILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEA 430
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M + PN TYV ++AC + G+EIH R+ + G + V N LI+M
Sbjct: 431 SEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISM 490
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG + A+ +F+ + ++ ISW +++ + G L +F +++G+ + +
Sbjct: 491 YARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTY 550
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L AC+ L G +IH V + L D VA L+N+Y+ C + A +VF +
Sbjct: 551 TSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQ 610
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ A++A+IGGYA EA+ LF ++ GL P +VT+ +L A A+ +++
Sbjct: 611 RDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEI 670
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HSL++K G+ S T + N ++ Y+KC ++L FD+M + +V+SWNA+I G
Sbjct: 671 HSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRG 730
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
+ ++L + M EG P++ T+ ++L+ S +E G++ C + + G +
Sbjct: 731 QDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGC 790
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+VD+ + G+L++ + + N W +L HG
Sbjct: 791 MVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHG 831
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 238/487 (48%), Gaps = 48/487 (9%)
Query: 169 RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
++ G ++ +L C + +L G ++H + + D++ LIN+Y +C +
Sbjct: 133 QQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSI 192
Query: 229 DLASRVFSNIQLPDLT--AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
+ A +V++ + + T +W+A++ GY Q G EA+ L +M GL T +L
Sbjct: 193 EEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLS 252
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
+ GR++H +K VAN +L+ Y+KC + E+ + FD+M+ VVS
Sbjct: 253 SCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVS 312
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
W +I G+ H A E+ + M EG PN TY N+LN S A++WGK H I+
Sbjct: 313 WTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHIL 372
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
G +S++ +G+ALV MYAKCG D R+VF+ L +++L++WNTM+ G A+ G EA E
Sbjct: 373 NAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASE 432
Query: 467 IYSMMQENKIKPNDNTFIGVLSACV-----------HIGLVEEGWHY------------- 502
IY MQ + PN T++ +L+ACV H +V++G+ +
Sbjct: 433 IYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYA 492
Query: 503 -----------FNSMIRDHGISPRMDHIASVVHLFACRGQTRRA---YEFIKSSPIEPNK 548
FN M+R IS +++ A G A ++ ++ + ++PN+
Sbjct: 493 RCGSIKDARLLFNKMVRKDIIS-----WTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNR 547
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI--MLSNVYAEANMWDETAKVRK 606
V + +L+ C + L GR ++++ T AH+ L N+Y+ + +V
Sbjct: 548 VTYTSILNACSSPAALDWGRRIHQQVIEAGLA-TDAHVANTLVNMYSMCGSVKDARQVFD 606
Query: 607 IMKEKSL 613
M ++ +
Sbjct: 607 RMTQRDI 613
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 129/231 (55%), Gaps = 2/231 (0%)
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
A+D+ + G + + +L +VK+ + GR++H II+ + N ++
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALI 183
Query: 321 DFYSKCELLEESLKTFDEMD--EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+ Y +C +EE+ + +++++ E V SWNA++ G++ + EA++LL++M G
Sbjct: 184 NMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALG 243
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T +L+ A+E G++ H +K +V + + +++MYAKCG +++AR+VFD
Sbjct: 244 RATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFD 303
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ +K++VSW ++ GYA G A EI+ MQ+ + PN T+I VL+A
Sbjct: 304 KMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNA 354
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/662 (34%), Positives = 382/662 (57%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GF + N L+++Y K DA+ LFD +P+R+V+SW+AL S + M A
Sbjct: 36 VVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEA 95
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F MV + PN ++ ++ C D+ G++IHG + + G + ++ +N L++M
Sbjct: 96 VSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDM 155
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G+L A VFD + + +SW ++++ H L++ KSG+ + F+
Sbjct: 156 YAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTL 215
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S L ACA + ++G Q+HS + K + D F+ +GLI++Y+KC +D A VF +
Sbjct: 216 SSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPE 275
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ AW+A+I G++Q + EA LF M + G+ ++ T S VL + A ++ RQ+
Sbjct: 276 RDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQI 335
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+L +K GF +V N+++D Y KC +E++ + F+E D+V + +L+ +
Sbjct: 336 HALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQG 395
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ L +M G P+ + S++LN + + A E GKQ H I+K GF S++ G++L
Sbjct: 396 EEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSL 455
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V+MYAKCG + DA F + + +VSW+ M+ G AQHG G+EAL+++ M + + PN
Sbjct: 456 VNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNH 515
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
T + VL AC H GLV E HYFNSM GI P +H A ++ L G+ A E +
Sbjct: 516 ITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVN 575
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
P + N +VW LL + HK++ LG AAE +L+ +PE + H++L+N+YA MWD+
Sbjct: 576 KMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDK 635
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
A+VR++MK+ +KK+ G SW E+++K++ F + + +++ +++LS L GY
Sbjct: 636 VARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGY 695
Query: 661 VP 662
VP
Sbjct: 696 VP 697
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/487 (31%), Positives = 249/487 (51%), Gaps = 2/487 (0%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
N + + + AC D GK++HG + +G + + V+N L+ +Y KCG A+ +F
Sbjct: 9 NEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLF 68
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
DA +R+ +SW +L S Y H + +F SG+ +EFS +S++ C L +
Sbjct: 69 DAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSV 128
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G +IH + K + D F A L+++YAK L+ AS VF I PD+ +W+A+I G
Sbjct: 129 QGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCV 188
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
A++L +M SG+ P+ T S L A A + GRQLHS +IKM S +F
Sbjct: 189 LHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSF 248
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
+ ++D YSKC ++++ F M E D+++WNA+I+GH + EA L M EG
Sbjct: 249 LGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEG 308
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
N T S +L + + A +Q H +K GF+ + + ++L+D Y KCG + DA
Sbjct: 309 IGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDAT 368
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+VF+ +LV + +++ YAQ G G EAL +Y MQ+ IKP+ +L+AC +
Sbjct: 369 RVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLS 428
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
E+G +++ G + S+V+++A G A P+ V W +
Sbjct: 429 AYEQGKQVHVHILK-FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVR-GIVSWSAM 486
Query: 555 LSGCKTH 561
+ G H
Sbjct: 487 IGGLAQH 493
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 224/422 (53%), Gaps = 33/422 (7%)
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G+ +EF+ SVL AC V +L +G Q+H +V + D+FVA L+ LYAKC A
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+F I + +W+AL Y EA+ LF M SG+ P+E + S ++ +
Sbjct: 65 RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
++++ GR++H +IK+G+ S F AN ++D Y+K +LE++ FDE+ + D+VSWNA+I
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAII 184
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
AG + ++ A+ELL++M G CPN++T S+ L + + E G+Q H ++K
Sbjct: 185 AGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMG 244
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
S+ +G L+DMY+KC ++DAR VF + +++++WN ++ G++Q+ EA ++ +M
Sbjct: 245 SDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLM 304
Query: 472 QENKIKPNDNTFIGVLSAC-----------VHIGLVEEGWHY----FNSMIRDHGI---- 512
I N T VL + +H ++ G+ + NS+I +G
Sbjct: 305 HTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHV 364
Query: 513 ---------SPRMDHI--ASVVHLFACRGQTR---RAYEFIKSSPIEPNKVVWRCLLSGC 558
SP +D + S+V +A GQ R Y ++ I+P+ V LL+ C
Sbjct: 365 EDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNAC 424
Query: 559 KT 560
+
Sbjct: 425 AS 426
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/664 (35%), Positives = 375/664 (56%), Gaps = 3/664 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQIGMPEVA 60
+ +G ++ N L+ MY F +++A+ +FDE ERN +SW+ L+S + + A
Sbjct: 127 MATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHA 186
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F MV ++PN + + V+AC D +G+++H + R+G + + +N L++M
Sbjct: 187 VKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDM 246
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A VF E + +SW + +S G H L++ L + SG+ + F+
Sbjct: 247 YSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTL 306
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L ACA G +G QIH + K + D ++A GL+++YAK LD A +VF I
Sbjct: 307 SSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQ 366
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL W+ALI G + + EA+ LF +M G + T + VL + A ++ RQ+
Sbjct: 367 RDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQV 426
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+L K+GF S + V N ++D Y KC+ L + + F++ +D++++ ++I L+ C +
Sbjct: 427 HALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITA-LSQCDH 485
Query: 361 GE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
GE AI+L +ML +G P+ + S++LN + + A E GKQ H ++K F S+V G+A
Sbjct: 486 GEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNA 545
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LV YAKCG + DA F L K +VSW+ M+ G AQHG G+ AL+++ M + I PN
Sbjct: 546 LVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPN 605
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
T VL AC H GLV+E YFNSM GI +H A ++ L G+ A E +
Sbjct: 606 HITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELV 665
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
S P + N VW LL+ + H+D LGR AAEK+ +PE + H++L+N YA A MWD
Sbjct: 666 NSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWD 725
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ AKVRK+MK+ +KK+ SW EL++K+H F + + D++ +++L + G
Sbjct: 726 DVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAG 785
Query: 660 YVPD 663
YVP+
Sbjct: 786 YVPN 789
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 184/602 (30%), Positives = 304/602 (50%), Gaps = 13/602 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
NHLL Y K A+++FDE+P+ +SWS+L++ +S MP AL FR M C +
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVR 100
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N + + V CA DA G ++H +GL + V+N L+ MYG G + A+ V
Sbjct: 101 CNEFV-LPVVLKCAP--DAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMV 157
Query: 134 FD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
FD A ERN++SW L+S+Y + H +K+F GV +EF + V+ AC +
Sbjct: 158 FDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRD 217
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L+ G ++H++V + + D F A L+++Y+K + +A+ VF + D+ +W+A I G
Sbjct: 218 LEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISG 277
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
G A++L ++M SSGL+P+ T S +L A A GRQ+H ++K S
Sbjct: 278 CVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSD 337
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
++A ++D Y+K LL+++ K FD + + D+V WNALI+G + EA+ L M
Sbjct: 338 NYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRK 397
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EG N T + +L ++ + AI +Q H K GF S+ + + L+D Y KC LN
Sbjct: 398 EGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNY 457
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A +VF+ S +++++ +M+ +Q G +A++++ M + P+ +L+AC
Sbjct: 458 AYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACAS 517
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
+ E+G +I+ +S A +V+ +A G A P E V W
Sbjct: 518 LSAYEQGKQVHAHLIKRQFMSDVFAGNA-LVYTYAKCGSIEDADLAFSGLP-EKGVVSWS 575
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSA-HIMLSNVYAEAN---MWDETAKVRKIM 608
++ G H G+ A + E S HI +++V N + DE + M
Sbjct: 576 AMIGGLAQHGH---GKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSM 632
Query: 609 KE 610
KE
Sbjct: 633 KE 634
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/480 (30%), Positives = 242/480 (50%), Gaps = 5/480 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G+ +V T N L+ MY K I A +F ++PE +V+SW+A ISG G + A
Sbjct: 228 VIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHA 287
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M L PN +T + ACA G G++IHG M ++ + +++++ L++M
Sbjct: 288 LELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDM 347
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K GLL A+ VFD +R+ + W +L+S +H L +F RK G ++ +
Sbjct: 348 YAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTL 407
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+VL + A L + Q+H+L K D V GLI+ Y KC+ L+ A RVF
Sbjct: 408 AAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGS 467
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ A++++I +Q +AI LF++M GL P S +L A A + G+Q+
Sbjct: 468 YDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQV 527
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK F S F N ++ Y+KC +E++ F + E VVSW+A+I G H
Sbjct: 528 HAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHG 587
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
A+++ M+ E PN T +++L + ++ K+ + + G + +
Sbjct: 588 KRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYAC 647
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQENK 475
++D+ + G+L+DA ++ + + N W +L H LGR A E +++ K
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEK 707
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 8/288 (2%)
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
M S T +L +A + + G +H+ ++K G F N +L FYSKC L + +
Sbjct: 1 MRSLETIGPLLTRYAATQSLLQGAHIHAHLLKSGL--FAVFRNHLLSFYSKCRLPGSARR 58
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
FDE+ + VSW++L+ + + +A+ + M N + +L + P
Sbjct: 59 VFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCA---PD 115
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLV 453
+G Q H + G ++ + +ALV MY G +++AR VFD +N VSWN ++
Sbjct: 116 AGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMS 175
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
Y ++ A++++ M ++PN+ F V++AC +E G +IR G
Sbjct: 176 AYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRT-GYD 234
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ ++V +++ G R A P E + V W +SGC H
Sbjct: 235 KDVFTANALVDMYSKLGDIRMAAVVFGKVP-ETDVVSWNAFISGCVLH 281
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/663 (33%), Positives = 378/663 (57%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G N L+ +Y ++ + A+++F +M R+ IS+++LISG +Q G + A
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRA 298
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M ++P+ T +SACAS G GK++H + + G+ + + L+++
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDL 358
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + +A F + N + W +L +Y Q G IFL + G+ ++++
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L C LG L +G QIH+ V K +F+ +V LI++YAK +LD A + ++
Sbjct: 419 PSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLRE 478
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+A+I GY Q EA+ LF +M + G+ + FS + A A ++ G+Q+
Sbjct: 479 EDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQI 538
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ G+S + N ++ Y++C +++ F+++D D +SWNALI+G S H
Sbjct: 539 HAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHC 598
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+++ M G NL+T+ + ++ +++ I+ GKQ H ++K G+DS + L
Sbjct: 599 EEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVL 658
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ +Y+KCG + DA++ F + KN+VSWN M+ GY+QHG G EA+ ++ M++ + PN
Sbjct: 659 ITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNH 718
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+GVLSAC H+GLV EG YF SM ++HG+ P+ +H VV L A EFI+
Sbjct: 719 VTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIE 778
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
PIEP+ ++WR LLS C HK++ +G +AA +L +PED++ +++LSN+YA + WD
Sbjct: 779 EMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDY 838
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
+ R++MK++ +KK+ G SW E++N +H F ++E ++ L+ + GY
Sbjct: 839 RDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGY 898
Query: 661 VPD 663
V D
Sbjct: 899 VQD 901
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 175/558 (31%), Positives = 292/558 (52%), Gaps = 3/558 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ SGF + + L+ +Y+ +++A KLFD++P NV W+ +ISG +
Sbjct: 36 IFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQV 95
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACAS-RGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L F LM+ + P+ T+ + AC+ + + ++IH ++ G + V N LI+
Sbjct: 96 LGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLID 155
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y K G + A+ VF+ ++S+SWV+++S Q G + +F KS V + +
Sbjct: 156 LYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYV 215
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+SVL AC + K+G Q+H + K L + FV L+ LY++ L A ++FS +
Sbjct: 216 FSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMH 275
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D ++++LI G AQ G + A+ LF KM + P VT + +L A A V G+Q
Sbjct: 276 RRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQ 335
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LHS +IKMG SS + ++LD Y KC +E + + F + +VV WN ++ + +
Sbjct: 336 LHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGN 395
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
E+ + M EG PN YTY +IL + + A++ G+Q H ++K GF NV + S
Sbjct: 396 LSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSV 455
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+DMYAK G L+ AR + L +++VSW M+ GY QH L EAL+++ M+ I+ +
Sbjct: 456 LIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSD 515
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ F +SAC I + +G ++ G S + ++V L+A G+ + AY
Sbjct: 516 NIGFSSAISACAGIQALNQG-QQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAF 574
Query: 540 KSSPIEPNKVVWRCLLSG 557
+ + N + W L+SG
Sbjct: 575 EKIDAKDN-ISWNALISG 591
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 163/561 (29%), Positives = 289/561 (51%), Gaps = 2/561 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF + + N L+ +Y K ++ A+ +F+ + ++ +SW A+ISG SQ G + A
Sbjct: 138 IIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEA 197
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M + P Y + +SAC + G+++HG + + GL + V N L+ +
Sbjct: 198 ILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTL 257
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G L +A+ +F R+ IS+ SL+S Q G L++F + + +
Sbjct: 258 YSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTV 317
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L ACA +G G Q+HS V K + D + L++LY KC ++ A F +
Sbjct: 318 ASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTET 377
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+ ++ Y QLG E+ +F++M GLMP++ T+ +L + G Q+
Sbjct: 378 ENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQI 437
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK GF +V + ++D Y+K L+ + + E DVVSW A+IAG+ +
Sbjct: 438 HTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLF 497
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA++L ++M +G + +S+ ++ + I A+ G+Q H G+ ++ IG+AL
Sbjct: 498 AEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNAL 557
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V +YA+CGR DA F+ + +K+ +SWN ++ G+AQ G EAL+++S M + ++ N
Sbjct: 558 VSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANL 617
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF +SA + +++G MI+ G + ++ L++ G A
Sbjct: 618 FTFGSAVSATANTANIKQGKQIHAMMIKT-GYDSETEASNVLITLYSKCGSIEDAKREFF 676
Query: 541 SSPIEPNKVVWRCLLSGCKTH 561
P E N V W +++G H
Sbjct: 677 EMP-EKNVVSWNAMITGYSQH 696
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 144/491 (29%), Positives = 240/491 (48%), Gaps = 3/491 (0%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ N TY+ C + G K++H R+++SG + + + LI++Y G + +A
Sbjct: 6 IRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAI 65
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA-VL 190
+FD N W ++S L +F L V E + ASVL AC+
Sbjct: 66 KLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGK 125
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
+V QIH+ + V LI+LY+K +DLA VF + L D +W A+I
Sbjct: 126 APFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMI 185
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
G +Q G+ EAI LF +M S ++P+ FS VL A ++ G QLH I+K G S
Sbjct: 186 SGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLS 245
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S TFV N ++ YS+ L + + F +M D +S+N+LI+G A++L + M
Sbjct: 246 SETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKM 305
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
+ P+ T +++L+ + + A GKQ H ++K G S+++I +L+D+Y KC +
Sbjct: 306 QLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDI 365
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
A + F ++N+V WN MLV Y Q G E+ I+ MQ + PN T+ +L C
Sbjct: 366 ETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTC 425
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
+G ++ G +I+ G + + ++ ++A G+ A ++ E + V
Sbjct: 426 TSLGALDLGEQIHTQVIKS-GFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVS 483
Query: 551 WRCLLSGCKTH 561
W +++G H
Sbjct: 484 WTAMIAGYTQH 494
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 145/290 (50%), Gaps = 3/290 (1%)
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M G+ + T+ ++ + + ++LH+ I K GF + + ++D Y
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
++ ++K FD++ +V WN +I+G LA + + L M+ E P+ T++++L
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 389 SSDIPA-IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
S A + +Q H I+ GF S+ ++ + L+D+Y+K G ++ A+ VF+ L K+ VS
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
W M+ G +Q+G EA+ ++ M ++ + P F VLSAC I L + G + I
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLG-EQLHGFI 239
Query: 508 RDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G+S ++V L++ R A E I S +++ + L+SG
Sbjct: 240 VKWGLSSETFVCNALVTLYS-RWGNLIAAEQIFSKMHRRDRISYNSLISG 288
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/647 (33%), Positives = 376/647 (58%), Gaps = 7/647 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N ++ +Y++ A+++F +MP R+ ++++ LISG +Q G E AL F
Sbjct: 173 GFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIF 232
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M L P+ T ++ACAS GD + G ++H ++++G+ + + L+++Y KC
Sbjct: 233 EEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKC 292
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + +A +F++S N + W +L ++ Q + ++F + +G+ ++F+ +L
Sbjct: 293 GDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCIL 352
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C + +G QIHSL K E D +V+ LI++Y+K L+ A RV ++ D+
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+++I GY Q +A+ F +M G+ P + + + A + G Q+H+ I
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
G+S + N +++ Y++C + E+ +F+E++ D ++WN L++G S + EA+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ M G N++T+ + L+ S+++ I+ GKQ H ++K G +G+AL+ +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG DA+ F +S +N VSWNT++ +QHG G EAL+++ M++ IKPND TFI
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVL+AC H+GLVEEG YF SM ++GI PR DH A V+ +F GQ RA +FI+ PI
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPI 712
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+ +VWR LLS CK HK++ +G +AA+ +L +P D++++++LSN YA W +V
Sbjct: 713 AADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQV 772
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
RK+M+++ ++K+ G SW E++N +H F F G LH + Q+
Sbjct: 773 RKMMRDRGVRKEPGRSWIEVKNVVHAF-------FVGDRLHPLAEQI 812
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/561 (30%), Positives = 308/561 (54%), Gaps = 4/561 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+T G I N L+ +Y K + A+++F+E+ R+ +SW A++SG++Q G+ E AL
Sbjct: 69 VTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEAL 128
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+R M + P Y +S+C G+ IH + Y+ G V N +I +Y
Sbjct: 129 GLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLY 188
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+CG A+ VF R+++++ +L+S + QCG H L+IF + SG++ + +
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L ACA LG+L+ G Q+HS +FK + D + L++LY KC ++ A +F++
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+ ++ + Q+ ++ +LF +M ++G+ P++ T+ +L +E G Q+H
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
SL +K GF S +V+ ++D YSK LE++ + + + E DVVSW ++IAG++
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A+ K+M G P+ ++ ++ + I A+ G Q H I G+ +V I +ALV
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALV 488
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
++YA+CGR+ +A F+ + K+ ++WN ++ G+AQ GL EAL+++ M ++ +K N
Sbjct: 489 NLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA-YEFIK 540
TF+ LSA ++ +++G +I+ G S + +++ L+ G A EF +
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSE 607
Query: 541 SSPIEPNKVVWRCLLSGCKTH 561
S E N+V W +++ C H
Sbjct: 608 MS--ERNEVSWNTIITSCSQH 626
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 249/480 (51%), Gaps = 9/480 (1%)
Query: 82 AVSACASRGDARSGK---EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
A+ AC RG+ R + EIH + GL V N LI++Y K GL+ A+ VF+
Sbjct: 47 ALRAC--RGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELS 104
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
R+++SWV++LS Y Q G L ++ ++GV + + +SVL +C G
Sbjct: 105 ARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRL 164
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
IH+ +K + FV +I LY +C LA RVF ++ D ++ LI G+AQ G
Sbjct: 165 IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
A+++F +M SGL P VT S +L A A + + G QLHS + K G SS + +
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+LD Y KC +E +L F+ D +VV WN ++ ++ EL M G PN
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
+TY IL + I+ G+Q H VK GF+S++ + L+DMY+K G L AR+V +
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
L K++VSW +M+ GY QH ++AL + MQ+ I P++ +S C I + +
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE-PNKVVWRCLLSG 557
G ++ I G S + ++V+L+A G+ R A+ + IE +++ W L+SG
Sbjct: 465 GLQ-IHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEE--IEHKDEITWNGLVSG 521
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/541 (27%), Positives = 254/541 (46%), Gaps = 26/541 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +G + I LL +YVK + A +F+ NV+ W+ ++ F QI +
Sbjct: 270 LFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKS 329
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M + PN +TY + C + G++IH ++G E + +VS LI+M
Sbjct: 330 FELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDM 389
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A+ V + E++ +SW S+++ Y Q L F +K G+
Sbjct: 390 YSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGL 449
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS + CA + ++ G+QIH+ ++ D + L+NLYA+C ++ A F I+
Sbjct: 450 ASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEH 509
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+ L+ G+AQ G EA+ +F++M SG+ + TF L A A++ E G+Q+
Sbjct: 510 KDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQI 569
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK G S T V N ++ Y KC E++ F EM E + VSWN +I
Sbjct: 570 HARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRG 629
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVV 415
EA++L M EG PN T+ +L S + +E G + ++P D
Sbjct: 630 LEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC 689
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +D++ + G+L+ A+K + + + + + W T+L H + +E+ ++
Sbjct: 690 V----IDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVH----KNIEVGEFAAKH 741
Query: 475 --KIKPNDNTFIGVLSACVHIGLVEEGW---HYFNSMIRDHGISPRMDH----IASVVHL 525
+++P+D+ +LS V E W M+RD G+ + +VVH
Sbjct: 742 LLELEPHDSASYVLLSNAY---AVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHA 798
Query: 526 F 526
F
Sbjct: 799 F 799
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/647 (33%), Positives = 376/647 (58%), Gaps = 7/647 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N ++ +Y++ A+++F +MP R+ ++++ LISG +Q G E AL F
Sbjct: 173 GFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIF 232
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M L P+ T ++ACAS GD + G ++H ++++G+ + + L+++Y KC
Sbjct: 233 EEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKC 292
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + +A +F++S N + W +L ++ Q + ++F + +G+ ++F+ +L
Sbjct: 293 GDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCIL 352
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C + +G QIHSL K E D +V+ LI++Y+K L+ A RV ++ D+
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+++I GY Q +A+ F +M G+ P + + + A + G Q+H+ I
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
G+S + N +++ Y++C + E+ +F+E++ D ++WN L++G S + EA+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ M G N++T+ + L+ S+++ I+ GKQ H ++K G +G+AL+ +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG DA+ F +S +N VSWNT++ +QHG G EAL+++ M++ IKPND TFI
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVL+AC H+GLVEEG YF SM ++GI PR DH A V+ +F GQ RA +FI+ PI
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPI 712
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+ +VWR LLS CK HK++ +G +AA+ +L +P D++++++LSN YA W +V
Sbjct: 713 AADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQV 772
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
RK+M+++ ++K+ G SW E++N +H F F G LH + Q+
Sbjct: 773 RKMMRDRGVRKEPGRSWIEVKNVVHAF-------FVGDRLHPLAEQI 812
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 169/561 (30%), Positives = 308/561 (54%), Gaps = 4/561 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+T G I N L+ +Y K + A+++F+E+ R+ +SW A++SG++Q G+ E AL
Sbjct: 69 VTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEAL 128
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+R M + P Y +S+C G+ IH + Y+ G V N +I +Y
Sbjct: 129 GLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLY 188
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+CG A+ VF R+++++ +L+S + QCG H L+IF + SG++ + +
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L ACA LG+L+ G Q+HS +FK + D + L++LY KC ++ A +F++
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+ ++ + Q+ ++ +LF +M ++G+ P++ T+ +L +E G Q+H
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
SL +K GF S +V+ ++D YSK LE++ + + + E DVVSW ++IAG++
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A+ K+M G P+ ++ ++ + I A+ G Q H I G+ +V I +ALV
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALV 488
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
++YA+CGR+ +A F+ + K+ ++WN ++ G+AQ GL EAL+++ M ++ +K N
Sbjct: 489 NLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA-YEFIK 540
TF+ LSA ++ +++G +I+ G S + +++ L+ G A EF +
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSE 607
Query: 541 SSPIEPNKVVWRCLLSGCKTH 561
S E N+V W +++ C H
Sbjct: 608 MS--ERNEVSWNTIITSCSQH 626
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 249/480 (51%), Gaps = 9/480 (1%)
Query: 82 AVSACASRGDARSGK---EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
A+ AC RG+ R + EIH + GL V N LI++Y K GL+ A+ VF+
Sbjct: 47 ALRAC--RGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELS 104
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
R+++SWV++LS Y Q G L ++ ++GV + + +SVL +C G
Sbjct: 105 ARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRL 164
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
IH+ +K + FV +I LY +C LA RVF ++ D ++ LI G+AQ G
Sbjct: 165 IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
A+++F +M SGL P VT S +L A A + + G QLHS + K G SS + +
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+LD Y KC +E +L F+ D +VV WN ++ ++ EL M G PN
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
+TY IL + I+ G+Q H VK GF+S++ + L+DMY+K G L AR+V +
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
L K++VSW +M+ GY QH ++AL + MQ+ I P++ +S C I + +
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE-PNKVVWRCLLSG 557
G ++ I G S + ++V+L+A G+ R A+ + IE +++ W L+SG
Sbjct: 465 GLQ-IHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEE--IEHKDEITWNGLVSG 521
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/541 (27%), Positives = 254/541 (46%), Gaps = 26/541 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +G + I LL +YVK + A +F+ NV+ W+ ++ F QI +
Sbjct: 270 LFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKS 329
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M + PN +TY + C + G++IH ++G E + +VS LI+M
Sbjct: 330 FELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDM 389
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A+ V + E++ +SW S+++ Y Q L F +K G+
Sbjct: 390 YSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGL 449
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS + CA + ++ G+QIH+ ++ D + L+NLYA+C ++ A F I+
Sbjct: 450 ASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEH 509
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+ L+ G+AQ G EA+ +F++M SG+ + TF L A A++ E G+Q+
Sbjct: 510 KDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQI 569
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK G S T V N ++ Y KC E++ F EM E + VSWN +I
Sbjct: 570 HARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRG 629
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVV 415
EA++L M EG PN T+ +L S + +E G + ++P D
Sbjct: 630 LEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC 689
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +D++ + G+L+ A+K + + + + + W T+L H + +E+ ++
Sbjct: 690 V----IDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVH----KNIEVGEFAAKH 741
Query: 475 --KIKPNDNTFIGVLSACVHIGLVEEGW---HYFNSMIRDHGISPRMDH----IASVVHL 525
+++P+D+ +LS V E W M+RD G+ + +VVH
Sbjct: 742 LLELEPHDSASYVLLSNAY---AVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHA 798
Query: 526 F 526
F
Sbjct: 799 F 799
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/670 (34%), Positives = 379/670 (56%), Gaps = 6/670 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SGF +V L+ MY+K D + +FDEM +NV+SW++L+SG+++ G+ + +
Sbjct: 131 LKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVI 190
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M + PN +T+ + A A G ++H + ++G E + V N LI MY
Sbjct: 191 HLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMY 250
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K ++ A+ VFD+ + R+S++W ++ Y G ++ G ++F R +GV +S
Sbjct: 251 LKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFC 310
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ L C+ L Q+H V K EF + + L+ Y+KC +D A ++FS
Sbjct: 311 TALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAA 370
Query: 242 -DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+A+IGG+ Q +A+DLF +M G+ P+ T+S VL K + QL
Sbjct: 371 HNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQL 426
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ IIK + VA +LD Y K + ES + F + D+V+W+A++ G +
Sbjct: 427 HAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDS 486
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNI-SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A+E+ ++ EG PN YT+S+++N SS +E GKQ H VK G + + + SA
Sbjct: 487 EKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSA 546
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+ MY+K G + A KVF +++VSWN+M+ GY QHG ++ALE++ +MQ + +
Sbjct: 547 LLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLD 606
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
D TFIGVL+AC H GLVEEG YFN MI+D+ I +++H + +V L++ G +A + I
Sbjct: 607 DVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDII 666
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
P + +WR LL+ C+ H++L LG+ AAEK++S P D +++LSN++A A W+
Sbjct: 667 NGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWE 726
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
E A VRK+M E+ +KK+ GCSW E++N++ F + ++ + +LS+ L D G
Sbjct: 727 EKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMG 786
Query: 660 YVPDPIYSSH 669
Y PD Y H
Sbjct: 787 YQPDTNYVFH 796
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 160/560 (28%), Positives = 283/560 (50%), Gaps = 8/560 (1%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
HP+ Y+ L SR A +LFDE P +++ ++ L+ FS+ AL+ F+
Sbjct: 34 LHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFK 93
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
+ L + T A+ C D G+++H + +SG + V L++MY K
Sbjct: 94 DLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTE 153
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ +FD +N +SW SLLS Y + G + + + + GV + F+ A+VLG
Sbjct: 154 DFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLG 213
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
A A ++ G+Q+H+++ K EF FV LI +Y K E + A VF ++ + D
Sbjct: 214 ALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVT 273
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ +IGGYA +G E +F +M +G+ S F L + +E +QLH ++
Sbjct: 274 WNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVV 333
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAI 364
K G+ + ++ YSKC ++E+ K F D H+VV+W A+I G + + + +A+
Sbjct: 334 KNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAV 393
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L M EG PN +TYS +L + P+ Q H I+K ++ + +AL+D Y
Sbjct: 394 DLFCQMSREGVRPNHFTYSTVL---AGKPS-SLLSQLHAQIIKAYYEKVPSVATALLDAY 449
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
K G + ++ +VF + +K++V+W+ ML G AQ +A+E++ + + +KPN+ TF
Sbjct: 450 VKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFS 509
Query: 485 GVLSAC-VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
V++AC VE G + ++ G S + ++++ +++ +G A E + +
Sbjct: 510 SVINACSSSAATVEHGKQIHATAVKS-GKSNALCVSSALLTMYSKKGNIESA-EKVFTRQ 567
Query: 544 IEPNKVVWRCLLSGCKTHKD 563
E + V W +++G H D
Sbjct: 568 EERDIVSWNSMITGYGQHGD 587
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 240/488 (49%), Gaps = 18/488 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GF N L+ MY+K + DA+ +FD M R+ ++W+ +I G++ IG
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M ++ + + A+ C+ + + K++H + ++G E + L+
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT 350
Query: 121 YGKCGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KC + A +F A N ++W +++ + Q + + +F + GV + F+
Sbjct: 351 YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFT 410
Query: 180 CASVLGA--CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
++VL ++L Q+H+ + K E VA L++ Y K + ++RVF +
Sbjct: 411 YSTVLAGKPSSLLS------QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYS 464
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG- 296
I D+ AWSA++ G AQ + +A+++F+++ G+ P+E TFS V+ A + T+
Sbjct: 465 IPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEH 524
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+Q+H+ +K G S+ V++ +L YSK +E + K F +E D+VSWN++I G+
Sbjct: 525 GKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQ 584
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVV 415
+A+E+ + M +G + T+ +L + +E G++ ++K D +
Sbjct: 585 HGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIE 644
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
S +VD+Y++ G + A + + + + W T+L H LE+ + E
Sbjct: 645 HYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVH----RNLELGKLAAEK 700
Query: 475 --KIKPND 480
++PND
Sbjct: 701 LVSLQPND 708
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/662 (34%), Positives = 368/662 (55%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF +V+T + L+ MY K +++DA ++F EMPERN++ WSA+I+G+ Q L
Sbjct: 165 IQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGL 224
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M+ + + TY +CA + G ++HG +S +S + ++MY
Sbjct: 225 KLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMY 284
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + A VF+ S+ +++ Y + + + L IF +++ + E S +
Sbjct: 285 AKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLS 344
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
L AC+V+ G+Q+H L KC L F+ VA ++++Y KC L A +F ++
Sbjct: 345 GALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERR 404
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +W+A+I + Q + + + LFV M S + P + T+ V+ A A + G ++H
Sbjct: 405 DAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIH 464
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
IIK G FV + ++D Y KC +L E+ K ++E VSWN++I+G +
Sbjct: 465 GRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSE 524
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
A ML G P+ YTY+ +L++ +++ IE GKQ H I+K S+V I S LV
Sbjct: 525 NAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLV 584
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY+KCG + D+R +F+ ++ V+W+ M+ YA HGLG +A+ ++ MQ +KPN
Sbjct: 585 DMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHT 644
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
FI VL AC H+G V++G HYF M+ +G+ P+M+H + +V L GQ A + I+S
Sbjct: 645 IFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIES 704
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P E + V+WR LLS CK ++ + A +L DP+D+SA+++L+NVYA MW E
Sbjct: 705 MPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEV 764
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
AK+R IMK LKK+ GCSW E+++++H F A + +++E + L + GYV
Sbjct: 765 AKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYV 824
Query: 662 PD 663
PD
Sbjct: 825 PD 826
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 159/642 (24%), Positives = 287/642 (44%), Gaps = 76/642 (11%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC------------- 124
T+ + C++ GK++H +M +G +V+NCL+ Y K
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67
Query: 125 ------------------GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
G + AQ +FD+ ER+ +SW SLLS Y G + ++IF+
Sbjct: 68 PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
R + + A +L AC+ + + +G+Q+H L + E D L+++Y+KC+
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
KLD A RVF + +L WSA+I GY Q + E + LF M G+ S+ T++ V
Sbjct: 188 KLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
+ A + G QLH +K F+ + + LD Y+KCE + ++ K F+ + S
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQS 307
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
+NA+I G+ +A+++ + + + + S L S I G Q H V
Sbjct: 308 YNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAV 367
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
K G N+ + + ++DMY KCG L +A +F+ + ++ VSWN ++ + Q+ + L
Sbjct: 368 KCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLS 427
Query: 467 IYSMMQENKIKPNDNTFIGVLSAC-----------VHIGLVEEG----WHYFNSMIRDHG 511
++ M + ++P+D T+ V+ AC +H +++ G W ++++ +G
Sbjct: 428 LFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYG 487
Query: 512 ----------ISPRMDHIA-----SVVHLFACRGQTRRAYEFIKS---SPIEPNKVVWRC 553
I R++ S++ F+ + Q+ A + I P+ +
Sbjct: 488 KCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYAT 547
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTD-PEDTSAHIMLSNVYAE-ANMWDETAKVRKIMKEK 611
+L C + LG+ +IL D L ++Y++ NM D ++M EK
Sbjct: 548 VLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDS-----RLMFEK 602
Query: 612 SLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
+ K+D +W+ + Y + I+L E M L+V
Sbjct: 603 APKRDY-VTWSAMICAYAYHGLGE----KAINLFEEMQLLNV 639
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 128/253 (50%), Gaps = 31/253 (12%)
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
++TFS++L +++K G+Q+H+ +I GF +VAN +L FY K + + K FD
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDM---------------LFEG-------- 374
M + DV+SWN LI G+ + G A L M L G
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 375 -------HCPNLY-TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
P+ Y T++ IL S I G Q HC ++ GF+++VV GSALVDMY+K
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
C +L+DA +VF + +NLV W+ ++ GY Q+ E L+++ M + + + +T+ V
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 487 LSACVHIGLVEEG 499
+C + + G
Sbjct: 246 FRSCAGLSAFKLG 258
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/670 (34%), Positives = 378/670 (56%), Gaps = 6/670 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SGF +V L+ MY+K D + +FDEM +NV+SW++L+SG+++ G+ + +
Sbjct: 131 LKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVI 190
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M + PN +T+ + A A G ++H + ++G E + V N LI MY
Sbjct: 191 HLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMY 250
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K ++ A+ VFD+ + R+S++W ++ Y G ++ G ++F R +GV +S
Sbjct: 251 LKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFC 310
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ L C+ L Q+H V K EF + + L+ Y+KC +D A ++FS
Sbjct: 311 TALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAA 370
Query: 242 -DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+A+IGG+ Q +A+DLF +M G+ P+ T+S VL K + QL
Sbjct: 371 HNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQL 426
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ IIK + VA +LD Y K + ES + F + D+V+W+A++ G +
Sbjct: 427 HAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDS 486
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNI-SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A+E+ ++ EG PN YT+S+++N SS +E GKQ H VK G + + + SA
Sbjct: 487 EKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSA 546
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+ MY+K G + A KVF +++VSWN+M+ GY QHG ++ALE++ +MQ + +
Sbjct: 547 LLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLD 606
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
D TFIGVL+AC H GLVEEG YFN MI+D+ I + +H + +V L++ G +A + I
Sbjct: 607 DVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDII 666
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
P + +WR LL+ C+ H++L LG+ AAEK++S P D +++LSN++A A W+
Sbjct: 667 NGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWE 726
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
E A VRK+M E+ +KK+ GCSW E++N++ F + ++ + +LS+ L D G
Sbjct: 727 EKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMG 786
Query: 660 YVPDPIYSSH 669
Y PD Y H
Sbjct: 787 YQPDTNYVFH 796
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 160/560 (28%), Positives = 283/560 (50%), Gaps = 8/560 (1%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
HP+ Y+ L SR A +LFDE P +++ ++ L+ FS+ AL+ F+
Sbjct: 34 LHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFK 93
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
+ L + T A+ C D G+++H + +SG + V L++MY K
Sbjct: 94 DLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTE 153
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ +FD +N +SW SLLS Y + G + + + + GV + F+ A+VLG
Sbjct: 154 DFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLG 213
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
A A ++ G+Q+H+++ K EF FV LI +Y K E + A VF ++ + D
Sbjct: 214 ALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVT 273
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ +IGGYA +G E +F +M +G+ S F L + +E +QLH ++
Sbjct: 274 WNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVV 333
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAI 364
K G+ + ++ YSKC ++E+ K F D H+VV+W A+I G + + + +A+
Sbjct: 334 KNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAV 393
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L M EG PN +TYS +L + P+ Q H I+K ++ + +AL+D Y
Sbjct: 394 DLFCQMSREGVRPNHFTYSTVL---AGKPS-SLLSQLHAQIIKAYYEKVPSVATALLDAY 449
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
K G + ++ +VF + +K++V+W+ ML G AQ +A+E++ + + +KPN+ TF
Sbjct: 450 VKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFS 509
Query: 485 GVLSAC-VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
V++AC VE G + ++ G S + ++++ +++ +G A E + +
Sbjct: 510 SVINACSSSAATVEHGKQIHATAVKS-GKSNALCVSSALLTMYSKKGNIESA-EKVFTRQ 567
Query: 544 IEPNKVVWRCLLSGCKTHKD 563
E + V W +++G H D
Sbjct: 568 EERDIVSWNSMITGYGQHGD 587
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 239/488 (48%), Gaps = 18/488 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GF N L+ MY+K + DA+ +FD M R+ ++W+ +I G++ IG
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M ++ + + A+ C+ + + K++H + ++G E + L+
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT 350
Query: 121 YGKCGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KC + A +F A N ++W +++ + Q + + +F + GV + F+
Sbjct: 351 YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFT 410
Query: 180 CASVLGA--CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
++VL ++L Q+H+ + K E VA L++ Y K + ++RVF +
Sbjct: 411 YSTVLAGKPSSLLS------QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYS 464
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG- 296
I D+ AWSA++ G AQ + +A+++F+++ G+ P+E TFS V+ A + T+
Sbjct: 465 IPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEH 524
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+Q+H+ +K G S+ V++ +L YSK +E + K F +E D+VSWN++I G+
Sbjct: 525 GKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQ 584
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVV 415
+A+E+ + M +G + T+ +L + +E G++ ++K D
Sbjct: 585 HGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXE 644
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
S +VD+Y++ G + A + + + + W T+L H LE+ + E
Sbjct: 645 HYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVH----RNLELGKLAAEK 700
Query: 475 --KIKPND 480
++PND
Sbjct: 701 LVSLQPND 708
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 254/734 (34%), Positives = 396/734 (53%), Gaps = 73/734 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + F P V N L+ MY+K S + A K+FD MP+R+ +SW+A++ G++ G VA
Sbjct: 68 MILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVA 127
Query: 61 LNYFRLMV---CCVLEP------------NYYTYVGAVSACASRGDARSGKEIHG----- 100
F M C V+E + T+ + +C+S D G +IHG
Sbjct: 128 QKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKM 187
Query: 101 -------------RMY----------RSGLEL-------------------------NSH 112
MY R GLEL +
Sbjct: 188 GFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVV 247
Query: 113 VSNCLINMYGKCGLLSS-AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
+ ++MY KC LS + +F++ N S+ +++ Y + + + L +F L +KS
Sbjct: 248 IGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKS 307
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G+ + E S + ACAV+ G+Q+H L K + + VA ++++Y KC L A
Sbjct: 308 GLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEA 367
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
VF + D +W+A+I + Q G + + LFV M SG+ P E T+ VL A A
Sbjct: 368 CLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGW 427
Query: 292 KETIGGRQLHSLIIK--MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ G ++H+ IIK MG SF +A ++D YSKC ++E++ K D + E VVSWNA
Sbjct: 428 QALNCGMEIHNRIIKSRMGLDSFVGIA--LIDMYSKCGMMEKAEKLHDRLAEQTVVSWNA 485
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I+G EA + ML G P+ +TY+ IL+ +++ +E GKQ H I+K
Sbjct: 486 IISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKE 545
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
S+ I S LVDMY+KCG + D + +F+ +++ V+WN M+ GYAQHGLG EAL+I+
Sbjct: 546 LQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFE 605
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
MQ +KPN TF+ VL AC H+GLVE+G HYF+SM+ ++G+ P+++H + VV +
Sbjct: 606 YMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRS 665
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
GQ +A E I+ P E + V+WR LLS CK H ++ + AA IL +PED++A+++LS
Sbjct: 666 GQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLS 725
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMN 649
N+YA A MW+E K+RK+M+ LKK+ GCSW E+++++H F A + +++E ++
Sbjct: 726 NIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLD 785
Query: 650 QLSVHLFDGGYVPD 663
L+ + GY+PD
Sbjct: 786 VLTDEMKWVGYMPD 799
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 152/553 (27%), Positives = 245/553 (44%), Gaps = 71/553 (12%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T+ C+ R GK+ H RM + + V+NCLI MY KC L A VFD
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF---------------SCAS 182
+R+++SW ++L Y G+ K+F +G + E + A
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC----------------- 225
VL +C+ L + G+QIH L K + D L+++YAKC
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM 223
Query: 226 --------------EKLDLASRV-----------------------FSNIQLPDLTAWSA 248
K D + V F+++ +L +++A
Sbjct: 224 QKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNA 283
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I GYA+ K EA+ +F + SGL EV+ S A A +K + G Q+H L +K
Sbjct: 284 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSL 343
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
S VAN +LD Y KC L E+ F+EM D VSWNA+IA H + + + + L
Sbjct: 344 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 403
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
ML G P+ +TY ++L + A+ G + H I+K + +G AL+DMY+KCG
Sbjct: 404 WMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCG 463
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ A K+ D L+ + +VSWN ++ G++ EA + +S M E + P++ T+ +L
Sbjct: 464 MMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILD 523
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
C ++ VE G +I+ S +I+S + + + ++ I +
Sbjct: 524 TCANLVTVELGKQIHAQIIKKELQSDA--YISSTLVDMYSKCGNMQDFQLIFEKAPNRDF 581
Query: 549 VVWRCLLSGCKTH 561
V W ++ G H
Sbjct: 582 VTWNAMVCGYAQH 594
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 203/485 (41%), Gaps = 85/485 (17%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+ C+ L G Q H+ + + FV LI +Y KC L A +VF + D
Sbjct: 48 IFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRD 107
Query: 243 LTAWSALIGGY--------------AQLGKACEAIDLF-VKMFSSGLMPSEVTFSYVLGA 287
+W+A++ GY A G C ++LF +M G + TF+ VL +
Sbjct: 108 TVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKS 167
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC-----------ELLEE----- 331
+ +++ GG Q+H L +KMGF + +LD Y+KC EL +E
Sbjct: 168 CSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAG 227
Query: 332 ---------SLKT-----------------------------FDEMDEHDVVSWNALIAG 353
+LKT F+ + H++ S+NA+I G
Sbjct: 228 VGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVG 287
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ S EA+ + + + G + + S + I G Q H +K SN
Sbjct: 288 YARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSN 347
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ + +A++DMY KCG L +A VF+ + S++ VSWN ++ + Q+G + L ++ M +
Sbjct: 348 ICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQ 407
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG--ISPRM--DHIASV--VHLFA 527
+ ++P++ T+ VL AC GW N + H I RM D + + +++
Sbjct: 408 SGMEPDEFTYGSVLKACA-------GWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYS 460
Query: 528 CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL--STDPEDTSAH 585
G +A E + E V W ++SG K + K+L DP++ +
Sbjct: 461 KCGMMEKA-EKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYA 519
Query: 586 IMLSN 590
+L
Sbjct: 520 TILDT 524
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/658 (34%), Positives = 378/658 (57%), Gaps = 4/658 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF +V L+ Y+K I+ A+ +FD +PE++ ++W+ +ISG ++G V+
Sbjct: 174 LVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVS 233
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F ++ + P+ Y +SAC+ GK+IH + R GLE+++ + N LI+
Sbjct: 234 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDS 293
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + +A +F+ +N ISW +LLS Y Q H +++F K G+ ++C
Sbjct: 294 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYAC 353
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L +CA L L G Q+H+ K L D +V LI++YAKC+ L A +VF
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA 413
Query: 241 PDLTAWSALIGGYAQLGKACE---AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
D+ ++A+I GY++LG E A+++F M + PS +TF +L A A +
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLS 473
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+Q+H L+ K G + F + ++D YS C L++S FDEM D+V WN++ AG++
Sbjct: 474 KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQ 533
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA+ L ++ P+ +T++N++ + ++ +++ G++ HC ++K G + N I
Sbjct: 534 SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYIT 593
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL+DMYAKCG DA K FD +S+++V WN+++ YA HG G++AL++ M I+
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 653
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
PN TF+GVLSAC H GLVE+G F M+R GI P +H +V L G+ +A E
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARE 712
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
I+ P +P +VWR LLSGC ++ L +AAE + +DP+D+ + MLSN+YA M
Sbjct: 713 LIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGM 772
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
W E KVR+ MK + + K+ G SW + ++H F + + + ++EV++ L V +
Sbjct: 773 WTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 188/669 (28%), Positives = 335/669 (50%), Gaps = 54/669 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G + N L+ +Y + + A+K+F++MPERN++SWS ++S + G+ E +
Sbjct: 70 IIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEES 129
Query: 61 LNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGK----EIHGRMYRSGLELNSHVSN 115
L F PN Y + AC+ D R G+ ++ + +SG + + +V
Sbjct: 130 LVVFLEFWRTRKDSPNEYILSSFIQACSGL-DGR-GRWMVFQLQSFLVKSGFDRDVYVGT 187
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
LI+ Y K G + A+ VFDA E+++++W +++S + G L++F + V
Sbjct: 188 LLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVP 247
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ ++VL AC++L L+ G QIH+ + + LE D + LI+ Y KC ++ A ++F
Sbjct: 248 DGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLF 307
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ + ++ +W+ L+ GY Q EA++LF M GL P S +L + A +
Sbjct: 308 NGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALG 367
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G Q+H+ IK + ++V N+++D Y+KC+ L ++ K FD DVV +NA+I G+
Sbjct: 368 FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYS 427
Query: 356 ---ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
EA+ + +DM F P+L T+ ++L S+ + ++ KQ H + K G +
Sbjct: 428 RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL 487
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
++ GSAL+D+Y+ C L D+R VFD + K+LV WN+M GY Q EAL ++ +Q
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI------------------SP 514
++ +P++ TF +++A ++ V+ G F+ + G+ SP
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLG-QEFHCQLLKRGLECNPYITNALLDMYAKCGSP 606
Query: 515 RMDHIA-------------SVVHLFACRGQTRRAYEFIK---SSPIEPNKVVWRCLLSGC 558
H A SV+ +A G+ ++A + ++ S IEPN + + +LS C
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
Query: 559 KTHKDLV---LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
+H LV L ++ +PE T ++ + ++ A + K R+++ EK K
Sbjct: 667 -SHAGLVEDGLKQFELMLRFGIEPE-TEHYVCMVSLLGRAGRLN---KARELI-EKMPTK 720
Query: 616 DTGCSWTEL 624
W L
Sbjct: 721 PAAIVWRSL 729
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 251/472 (53%), Gaps = 20/472 (4%)
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
+HG++ GLEL++++SN LIN+Y + G + A+ VF+ ERN +SW +++S+ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 158 HVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGM--QIHSLVFKCALEFDKFV 214
+ L +FL R + +E+ +S + AC+ L M Q+ S + K + D +V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
LI+ Y K +D A VF + W+ +I G ++G++ ++ LF ++ +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+P S VL A + + GG+Q+H+ I++ G + N ++D Y KC + + K
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
F+ M +++SW L++G+ + + EA+EL M G P++Y S+IL + + A
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
+ +G Q H +K ++ + ++L+DMYAKC L DARKVFD ++ ++V +N M+ G
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425
Query: 455 YAQHGLG---REALEIYSMMQENKIKPNDNTFIGVLSAC---VHIGLVEEGWHYFNSMIR 508
Y++ G EAL I+ M+ I+P+ TF+ +L A +GL ++ + ++
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ----IHGLMF 481
Query: 509 DHGISPRMDHIASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+G++ + ++++ +++ C +R ++ +K + V+W + +G
Sbjct: 482 KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDL----VIWNSMFAG 529
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 7/181 (3%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
++ +L + + + + H I+ G + + + + L+++Y++ G + ARKVF+ +
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEG- 499
+NLVSW+TM+ HG+ E+L ++ + K PN+ + AC GL G
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGR 164
Query: 500 WHYF--NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
W F S + G + ++ + G A + P E + V W ++SG
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISG 223
Query: 558 C 558
C
Sbjct: 224 C 224
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/648 (34%), Positives = 373/648 (57%), Gaps = 7/648 (1%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVC 69
+ N L+ +Y++F ++ A+++F EMP + ++++ LIS +Q G E AL F M
Sbjct: 178 TVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRL 237
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
P+ T ++ACAS GD GK++H + ++G+ + + L+++Y KCG++
Sbjct: 238 SGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVE 297
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A +F + N + W +L +Y Q + +F +GV +EF+ +L C
Sbjct: 298 ALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTY 357
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
G + +G QIH L K E D +V+ LI++Y+K LD A R+ ++ D+ +W+++
Sbjct: 358 AGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSM 417
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I GY Q EA++ F M G+ P + + + A A +K G+Q+HS + G+
Sbjct: 418 IAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGY 477
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
S+ + N +++ Y++C +E+ F+ ++ D ++WN +++G S Y EA+E+
Sbjct: 478 SADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIK 537
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M G N++T+ + ++ S+++ I+ GKQ H ++K G S + +AL+ +Y KCG
Sbjct: 538 MYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGS 597
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ DA+ F +S +N VSWNT++ +QHG G EAL+++ M++ +KPND TFIGVL+A
Sbjct: 598 IEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAA 657
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C H+GLVEEG YF SM +HGI PR DH A VV + GQ RA +F++ P+ N +
Sbjct: 658 CSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAM 717
Query: 550 VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK 609
VWR LLS C+ HK++ +G AA+ +L +P D++++++LSN YA W VRK+MK
Sbjct: 718 VWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMK 777
Query: 610 EKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
++ ++K+ G SW E++N +H F F G LH + +Q+ +L D
Sbjct: 778 DRGVRKEPGRSWIEVKNVVHAF-------FVGDRLHPLAHQIYKYLAD 818
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/561 (30%), Positives = 303/561 (54%), Gaps = 4/561 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
IT G + I N L+ +Y K + A+++F+++ R+ +SW A++SG+++ G+ E A+
Sbjct: 69 ITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAV 128
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M C + P Y +SAC G+ +H ++Y+ G + V N LI +Y
Sbjct: 129 GLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALY 188
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+ G LS A+ VF + +++ +L+S + QCG L+IF R SG + A
Sbjct: 189 LRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIA 248
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L ACA +G+L G Q+HS + K + D + L++LY KC + A +F +
Sbjct: 249 SLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRT 308
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+ ++ Y Q+ ++ DLF +M ++G+ P+E T+ +L E G Q+H
Sbjct: 309 NVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIH 368
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
L IK GF S +V+ ++D YSK L+++ + + ++ DVVSW ++IAG++
Sbjct: 369 LLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCK 428
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA+E KDM G P+ ++ ++ + I A+ G+Q H + G+ ++V I +ALV
Sbjct: 429 EALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALV 488
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
++YA+CGR +A +F+ + K+ ++WN M+ G+AQ GL EALE++ M + +K N
Sbjct: 489 NLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVF 548
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA-YEFIK 540
TF+ +SA ++ +++G ++I+ G + + +++ L+ G A +F +
Sbjct: 549 TFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGSIEDAKMQFFE 607
Query: 541 SSPIEPNKVVWRCLLSGCKTH 561
S E N V W +++ C H
Sbjct: 608 MS--ERNHVSWNTIITSCSQH 626
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 266/526 (50%), Gaps = 9/526 (1%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG 95
M R S + ++GF PE L+ F V + A+ C RG +
Sbjct: 1 MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALREC--RGSVKHW 58
Query: 96 K---EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
IH + GL + N LI++Y K GL+ A+ VF+ R+++SWV++LS Y
Sbjct: 59 PLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGY 118
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
+ G + ++ SGV + + +SVL AC + G +H+ V+K +
Sbjct: 119 ARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSET 178
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
V LI LY + L LA RVFS + D ++ LI +AQ G A+++F +M S
Sbjct: 179 VVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLS 238
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G P VT + +L A A + + G+QLHS ++K G S + ++LD Y KC ++ E+
Sbjct: 239 GWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEA 298
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
L+ F D +VV WN ++ + ++ +L M+ G PN +TY +L +
Sbjct: 299 LEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYA 358
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
I G+Q H +K GF+S++ + L+DMY+K G L+ AR++ + L +K++VSW +M+
Sbjct: 359 GEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMI 418
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
GY QH +EALE + MQ I P++ +SAC I + +G +S + G
Sbjct: 419 AGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQG-QQIHSRVYVSGY 477
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE-PNKVVWRCLLSG 557
S + ++V+L+A G+++ A+ ++ IE +K+ W ++SG
Sbjct: 478 SADVSIWNALVNLYARCGRSKEAFSLFEA--IEHKDKITWNGMVSG 521
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 154/544 (28%), Positives = 265/544 (48%), Gaps = 32/544 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G P+ I LL +YVK I +A ++F NV+ W+ ++ + QI +
Sbjct: 270 LLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKS 329
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F MV + PN +TY + C G+ G++IH ++G E + +VS LI+M
Sbjct: 330 FDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDM 389
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A+ + + ++ +SW S+++ Y Q L+ F + G+
Sbjct: 390 YSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGL 449
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS + ACA + ++ G QIHS V+ D + L+NLYA+C + A +F I+
Sbjct: 450 ASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEH 509
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+ ++ G+AQ G EA+++F+KM+ +G+ + TF + A A++ + G+Q+
Sbjct: 510 KDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQI 569
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC-H 359
H+ +IK G +S T VAN ++ Y KC +E++ F EM E + VSWN +I SC
Sbjct: 570 HATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTII----TSCSQ 625
Query: 360 YG---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-------KQTHCCIVKPG 409
+G EA++L M EG PN T+ +L S + +E G H +P
Sbjct: 626 HGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPD 685
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIY 468
+ V VD+ + G+L+ ARK + + S N + W T+L H + +EI
Sbjct: 686 HYACV------VDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVH----KNIEIG 735
Query: 469 SMMQEN--KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH----IASV 522
+ + +++P+D+ +LS + + M++D G+ + +V
Sbjct: 736 ELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNV 795
Query: 523 VHLF 526
VH F
Sbjct: 796 VHAF 799
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/662 (35%), Positives = 382/662 (57%), Gaps = 6/662 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + N L++MY K ++D+++LF + ERNV+SW+AL S + Q + A+
Sbjct: 109 VVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAV 168
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ MV + PN ++ ++ACA + G++IHG M + GL+L+ +N L++MY
Sbjct: 169 GLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMY 228
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH-VHGLKIFLLS--RKSGVAISEF 178
K G + A VF + +SW ++++ C H + L + LL + SG + F
Sbjct: 229 SKAGEIEGAVAVFQDIAHPDVVSWNAIIAG---CVLHDCNDLALMLLDEMKGSGTRPNMF 285
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +S L ACA +G ++G Q+HS + K D F A+GL+++Y+KCE +D A R + ++
Sbjct: 286 TLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSM 345
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ AW+ALI GY+Q G +A+ LF KMFS + ++ T S VL + A ++ +
Sbjct: 346 PKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCK 405
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H++ IK G S +V N++LD Y KC ++E+ K F+E D+V++ ++I +
Sbjct: 406 QIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYG 465
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA++L M P+ + S++LN +++ A E GKQ H +K GF ++ +
Sbjct: 466 DGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASN 525
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+LV+MYAKCG + DA + F + ++ +VSW+ M+ GYAQHG G+EAL +++ M + + P
Sbjct: 526 SLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPP 585
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N T + VL AC H GLV EG YF M GI P +H A ++ L G+ A E
Sbjct: 586 NHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVEL 645
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
+ S P E + VW LL + HK++ LG+ AA+ + +PE + H++L+N+YA A MW
Sbjct: 646 VNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMW 705
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
+ AKVRK MK+ +KK+ G SW E+++K++ F + + +++ ++QL L
Sbjct: 706 ENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKA 765
Query: 659 GY 660
GY
Sbjct: 766 GY 767
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 194/569 (34%), Positives = 313/569 (55%), Gaps = 18/569 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF + NHL+ +Y K R A+KL DE E +V+SWS+L+SG+ Q G E A
Sbjct: 7 LIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEA 66
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M ++ N +T+ + AC+ + D G+++HG +G E + V+N L+ M
Sbjct: 67 LLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVM 126
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ---CGEHVHGLKIFLLSRKSGVAISE 177
Y KCGLL ++ +F +ERN +SW +L S Y Q CGE V K + +SG+ +E
Sbjct: 127 YAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMV---RSGIMPNE 183
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
FS + +L ACA L +G +IH L+ K L+ D+F A L+++Y+K +++ A VF +
Sbjct: 184 FSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQD 243
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
I PD+ +W+A+I G A+ L +M SG P+ T S L A A + G
Sbjct: 244 IAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELG 303
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
RQLHS +IKM S F A ++D YSKCE+++++ + +D M + D+++WNALI+G+
Sbjct: 304 RQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQC 363
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+ +A+ L M E N T S +L + + AI+ KQ H +K G S+ +
Sbjct: 364 GDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVI 423
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
++L+D Y KC +++A K+F+ + ++LV++ +M+ Y+Q+G G EAL++Y MQ+ IK
Sbjct: 424 NSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIK 483
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR---R 534
P+ +L+AC ++ E+G I+ G + S+V+++A G R
Sbjct: 484 PDPFICSSLLNACANLSAYEQGKQLHVHAIK-FGFMCDIFASNSLVNMYAKCGSIEDADR 542
Query: 535 AYEFIKSSPIEPNK--VVWRCLLSGCKTH 561
A+ I PN+ V W ++ G H
Sbjct: 543 AFSEI------PNRGIVSWSAMIGGYAQH 565
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 153/495 (30%), Positives = 254/495 (51%), Gaps = 33/495 (6%)
Query: 97 EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
E+H + + G + + N L+ +Y KC A+ + D S E + +SW SLLS Y Q G
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 157 EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
L +F GV +EF+ SVL AC++ +L +G ++H + E D FVA
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 217 GLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
L+ +YAKC LD + R+F I ++ +W+AL Y Q EA+ LF +M SG+MP
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
+E + S +L A A ++E GR++H L++KMG F AN ++D YSK +E ++ F
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
++ DVVSWNA+IAG + A+ LL +M G PN++T S+ L + + E
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKE 301
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G+Q H ++K S++ LVDMY+KC ++DAR+ +D + K++++WN ++ GY+
Sbjct: 302 LGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYS 361
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC-----------VHIGLVEEG----WH 501
Q G +A+ ++S M I N T VL + +H ++ G ++
Sbjct: 362 QCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFY 421
Query: 502 YFNSMIRDHGISPRMDHIA---------------SVVHLFACRGQTRRA---YEFIKSSP 543
NS++ +G +D + S++ ++ G A Y ++ +
Sbjct: 422 VINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDAD 481
Query: 544 IEPNKVVWRCLLSGC 558
I+P+ + LL+ C
Sbjct: 482 IKPDPFICSSLLNAC 496
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 246/480 (51%), Gaps = 5/480 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ G + + N L+ MY K I A +F ++ +V+SW+A+I+G ++A
Sbjct: 209 MLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLA 268
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M PN +T A+ ACA+ G G+++H + + + + L++M
Sbjct: 269 LMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDM 328
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC ++ A+ +D+ +++ I+W +L+S Y QCG+H+ + +F + ++ +
Sbjct: 329 YSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTL 388
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++VL + A L +KV QIH++ K + D +V L++ Y KC +D AS++F
Sbjct: 389 STVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTW 448
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL A++++I Y+Q G EA+ L+++M + + P S +L A A++ G+QL
Sbjct: 449 EDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQL 508
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H IK GF F +N++++ Y+KC +E++ + F E+ +VSW+A+I G+ H
Sbjct: 509 HVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHG 568
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFDSNVVIGSA 419
EA+ L ML +G PN T ++L + + GKQ + V G +
Sbjct: 569 KEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYAC 628
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQENK 475
++D+ + G+LN+A ++ + + + W +L H LG++A ++ ++ K
Sbjct: 629 MIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEK 688
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 193/374 (51%), Gaps = 9/374 (2%)
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
M++H+ + K D + L+ LY+KC + A ++ D+ +WS+L+ GY Q
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
G EA+ +F +M G+ +E TF VL A + ++ GR++H + + GF S FVA
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
NT++ Y+KC LL++S + F + E +VVSWNAL + ++ S GEA+ L K+M+ G
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
PN ++ S ILN + + + G++ H ++K G D + +ALVDMY+K G + A V
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
F ++ ++VSWN ++ G H AL + M+ + +PN T L AC +G
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACR--GQTRRAYEFIKSSPIEPNKVVWRCL 554
E G +S+I+ S + V C RRAY+ + I + W L
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDI----IAWNAL 356
Query: 555 LSG---CKTHKDLV 565
+SG C H D V
Sbjct: 357 ISGYSQCGDHLDAV 370
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/664 (33%), Positives = 377/664 (56%), Gaps = 2/664 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF+ +V+T + LL MY K R++D+ K+F E+P +N + WSA+I+G Q +
Sbjct: 202 IVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILG 261
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ M + + Y +CA + G ++H + + V ++M
Sbjct: 262 LELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDM 321
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH-VHGLKIFLLSRKSGVAISEFS 179
Y KCG L+ AQ +F+ SL ++S+ + + C E L+ F L KSG+ +E S
Sbjct: 322 YAKCGSLADAQRIFN-SLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEIS 380
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ ACA + G Q+HSL K L + VA ++++Y KCE L A +F ++
Sbjct: 381 LSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEME 440
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D +W+A+I + Q G E ++LF M + P + T+ VL A + + G +
Sbjct: 441 RRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGME 500
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ IIK G +FV ++D Y KC ++EE+ K D +++ +VSWNA+IAG H
Sbjct: 501 IHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKH 560
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A +ML P+ +TY+ +L+ +++ ++ GKQ H I+K S+V I S
Sbjct: 561 SEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITST 620
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMY+KCG + D+ VF+ +K+ V+WN M+ GYAQHGLG EAL + MQ ++PN
Sbjct: 621 LVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPN 680
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ +L AC H+G +++G HYFN+M+ ++G+ P+++H + ++ + G+ A + I
Sbjct: 681 HATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLI 740
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ P E + V+WR LLS CK H ++ + A IL +PED+SA I+LSN+YA+A MW
Sbjct: 741 QEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWG 800
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ +++RK+M+ LKK+ GCSW E+++++H F + +++++++ L + G
Sbjct: 801 KVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIG 860
Query: 660 YVPD 663
Y+PD
Sbjct: 861 YIPD 864
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 186/596 (31%), Positives = 301/596 (50%), Gaps = 40/596 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI SGF P+V N L+ MY++ S +N A K+F++M +R+VIS++ +ISG++ G +A
Sbjct: 69 MIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLA 128
Query: 61 LNYF------------------------RLMVCCVLEPNYYTYVG--------AVSACAS 88
+F R + L+ VG + AC+
Sbjct: 129 NEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSV 188
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
D G ++HG + R G + + L++MY KC L + +F +N + W ++
Sbjct: 189 LEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAI 248
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
++ Q EH+ GL++F +K G+ +S+ ASV +CA L LKVG Q+H+ KC
Sbjct: 249 IAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDF 308
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
D V +++YAKC L A R+F+++ L ++A+I G + K EA+ F
Sbjct: 309 GSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQL 368
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
+ SGL +E++ S A A +K + GRQLHSL +K S VAN++LD Y KCE
Sbjct: 369 LLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEA 428
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
L E+ FDEM+ D VSWNA+IA H + + E + L ML P+ +TY ++L
Sbjct: 429 LSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKA 488
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
S A+ G + H I+K G + +G AL+DMY KCG + +A+K+ D + + +VSW
Sbjct: 489 CSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSW 548
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
N ++ G+ +A + M + +KP++ T+ VL AC ++ V G +I+
Sbjct: 549 NAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIK 608
Query: 509 DHGISPRMDHIASVVHLFA-CRGQTRRAYEFIKSSPIEPNK--VVWRCLLSGCKTH 561
+ + +++V +++ C A F K+ PNK V W ++ G H
Sbjct: 609 LE-LHSDVYITSTLVDMYSKCGNMQDSALVFEKA----PNKDFVTWNAMICGYAQH 659
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 230/469 (49%), Gaps = 32/469 (6%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L T+ + C+ + GK+ H RM SG + ++SNCL+ MY +C L+ A
Sbjct: 39 LPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAY 98
Query: 132 FVFDA-------------------------------SLERNSISWVSLLSSYCQCGEHVH 160
VF+ + +R+ +SW S+LS + Q GE
Sbjct: 99 KVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRK 158
Query: 161 GLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI 219
+ +FL + R V + + A VL AC+VL + +G+Q+H L+ + D L+
Sbjct: 159 SIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALL 218
Query: 220 NLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEV 279
++YAKC++LD + ++FS I + + WSA+I G Q + ++LF +M G+ S+
Sbjct: 219 DMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQS 278
Query: 280 TFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
++ V + A + G QLH+ +K F S V LD Y+KC L ++ + F+ +
Sbjct: 279 IYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSL 338
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
+H + +NA+I G + + EA++ + +L G N + S + + I G+
Sbjct: 339 PKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGR 398
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
Q H VK SN+ + ++++DMY KC L++A +FD + ++ VSWN ++ + Q+G
Sbjct: 399 QLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNG 458
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
E L +++ M +++P+ T+ VL AC + G N +I+
Sbjct: 459 NEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIK 507
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 46/228 (20%)
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ T+S+I+ SD +++ GKQ H ++ GF +V I + L+ MY +C LN A KVF
Sbjct: 42 KIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVF 101
Query: 438 DHLSSKNLVSWNTMLVGYA-------------------------------QHGLGREALE 466
+ +S ++++S+NTM+ GYA Q+G R++++
Sbjct: 102 EKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSID 161
Query: 467 IY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV-- 523
++ M + ++ + TF VL AC ++E+G I+ HG+ RM VV
Sbjct: 162 VFLDMGRSEEVGFDQTTFAVVLKAC---SVLEDG----GLGIQVHGLIVRMGFYKDVVTG 214
Query: 524 ----HLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLG 567
++A + + + P++ N V W +++GC + + +LG
Sbjct: 215 SALLDMYAKCKRLDDSLKIFSEIPVK-NWVCWSAIIAGCVQNDEHILG 261
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/659 (34%), Positives = 365/659 (55%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N L+ +Y + A+ +F M +R+ ++++ LI+G SQ G E A+ F
Sbjct: 301 GFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 360
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M LEP+ T V AC+S G SG+++H + G N + L+N+Y KC
Sbjct: 361 KRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKC 420
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ +A F + N + W +L +Y + + +IF + + ++++ S+L
Sbjct: 421 SDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 480
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C LG+L++G QIHS + K + + + +V LI++YAK KLD A + D+
Sbjct: 481 KTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 540
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ +I GY Q +A+ F +M G+ EV + + A A ++ G+Q+H+
Sbjct: 541 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA 600
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
GFSS N ++ YSKC +EE+ F++ + D ++WNAL++G S + EA+
Sbjct: 601 CVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 660
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+ M EG N +T+ + + +S+ ++ GKQ H I K G+DS + +A++ MY
Sbjct: 661 RVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMY 720
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG ++DA+K F LS KN VSWN M+ Y++HG G EAL+ + M + ++PN T +
Sbjct: 721 AKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLV 780
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVLSAC HIGLV++G YF SM ++G++P+ +H VV + G RA +FI PI
Sbjct: 781 GVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPI 840
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP+ +VWR LLS C HK++ +G +AA +L +PED++ +++LSN+YA WD
Sbjct: 841 EPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLT 900
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
R+ MKEK +KK+ G SW E++N +H F ++HE L+ + GYV D
Sbjct: 901 RQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQD 959
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/556 (29%), Positives = 278/556 (50%), Gaps = 7/556 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N LL Y+ ++ A K+FDEMPER + +W+ +I + + F
Sbjct: 98 GFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLF 157
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARS---GKEIHGRMYRSGLELNSHVSNCLINMY 121
MV + PN T+ G + AC RG + + ++IH R+ GL ++ V N LI++Y
Sbjct: 158 GRMVNENVTPNEGTFSGVLEAC--RGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLY 215
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+ G + A+ VFD ++ SWV+++S + V +++F G+ + ++ +
Sbjct: 216 SRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFS 275
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SVL AC + +L++G Q+H LV K D +V L++LY L A +FSN+
Sbjct: 276 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQR 335
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D ++ LI G +Q G +A++LF +M GL P T + ++ A + G+QLH
Sbjct: 336 DAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLH 395
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ K+GF+S + +L+ Y+KC +E +L F E + +VV WN ++ +
Sbjct: 396 AYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLR 455
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+ + + M E PN YTY +IL + +E G+Q H I+K F N + S L+
Sbjct: 456 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLI 515
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAK G+L+ A + + K++VSW TM+ GY Q+ +AL + M + I+ ++
Sbjct: 516 DMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEV 575
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
+SAC + ++EG ++ G S + ++V L++ G AY +
Sbjct: 576 GLTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQ 634
Query: 542 SPIEPNKVVWRCLLSG 557
+ N + W L+SG
Sbjct: 635 TEAGDN-IAWNALVSG 649
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/562 (24%), Positives = 275/562 (48%), Gaps = 4/562 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G + I N L+ +Y + ++ A+++FD + ++ SW A+ISG S+ A
Sbjct: 196 IIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEA 255
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M + P Y + +SAC G+++HG + + G +++V N L+++
Sbjct: 256 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 315
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G L SA+ +F +R+++++ +L++ QCG +++F + G+ +
Sbjct: 316 YFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTL 375
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS++ AC+ G L G Q+H+ K + + L+NLYAKC ++ A F ++
Sbjct: 376 ASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEV 435
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+ ++ Y L + +F +M ++P++ T+ +L + + G Q+
Sbjct: 436 ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI 495
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS IIK F +V + ++D Y+K L+ + DVVSW +IAG+
Sbjct: 496 HSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFD 555
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A+ + ML G + +N ++ + + A++ G+Q H GF S++ +AL
Sbjct: 556 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNAL 615
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V +Y+KCG + +A F+ + + ++WN ++ G+ Q G EAL +++ M I N+
Sbjct: 616 VTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNN 675
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFI 539
TF + A +++G +++I G + +++ ++A C + +F+
Sbjct: 676 FTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFL 734
Query: 540 KSSPIEPNKVVWRCLLSGCKTH 561
+ S N+V W +++ H
Sbjct: 735 ELSM--KNEVSWNAMINAYSKH 754
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 218/444 (49%), Gaps = 8/444 (1%)
Query: 70 CVLEPNYYTYVGAVSAC-ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
C + PN+ T + C + G G+++H ++ + G + N+ +S L++ Y G L
Sbjct: 61 CGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLD 120
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR--KSGVAISEFSCASVLGA 186
A VFD ER +W ++ + G L R V +E + + VL A
Sbjct: 121 GALKVFDEMPERTIFTWNKMIKEL--ASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEA 178
Query: 187 CAVLG-NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
C V QIH+ + L V LI+LY++ +D A RVF + L D ++
Sbjct: 179 CRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSS 238
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W A+I G ++ EAI LF M+ G+MP+ FS VL A ++ G QLH L++
Sbjct: 239 WVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 298
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE-AI 364
K+GFSS T+V N ++ Y L + F M + D V++N LI G L+ C YGE A+
Sbjct: 299 KLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLING-LSQCGYGEKAM 357
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
EL K M +G P+ T ++++ S + G+Q H K GF SN I AL+++Y
Sbjct: 358 ELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLY 417
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKC + A F +N+V WN MLV Y R + I+ MQ +I PN T+
Sbjct: 418 AKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 477
Query: 485 GVLSACVHIGLVEEGWHYFNSMIR 508
+L C+ +G +E G + +I+
Sbjct: 478 SILKTCIRLGDLELGEQIHSQIIK 501
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 176/355 (49%), Gaps = 2/355 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + F N + L+ MY K +++ A + ++V+SW+ +I+G++Q + A
Sbjct: 499 IIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 558
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M+ + + AVSACA + G++IH + SG + N L+ +
Sbjct: 559 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 618
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A F+ + ++I+W +L+S + Q G + L++F + G+ + F+
Sbjct: 619 YSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTF 678
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S + A + N+K G Q+H+++ K + + V +I++YAKC + A + F + +
Sbjct: 679 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSM 738
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ- 299
+ +W+A+I Y++ G EA+D F +M S + P+ VT VL A + + G +
Sbjct: 739 KNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEY 798
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
S+ + G + V+D ++ LL + EM E D + W L++
Sbjct: 799 FESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSA 853
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 189/377 (50%), Gaps = 13/377 (3%)
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
G G+L G ++HS + K + + ++ L++ Y LD A +VF + +
Sbjct: 76 GCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIF 135
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL-----GAFA-DVKETIGGR 298
W+ +I A + + LF +M + + P+E TFS VL G+ A DV E
Sbjct: 136 TWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVE----- 190
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+ II G T V N ++D YS+ ++ + + FD + D SW A+I+G +
Sbjct: 191 QIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNE 250
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EAI L DM G P Y +S++L+ I ++E G+Q H ++K GF S+ + +
Sbjct: 251 CEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 310
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALV +Y G L A +F ++S ++ V++NT++ G +Q G G +A+E++ MQ + ++P
Sbjct: 311 ALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEP 370
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ NT ++ AC G + G ++ G + ++++L+A A +
Sbjct: 371 DSNTLASLVVACSSDGTLFSG-QQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNY 429
Query: 539 IKSSPIEPNKVVWRCLL 555
+ +E N V+W +L
Sbjct: 430 FLETEVE-NVVLWNVML 445
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 4/287 (1%)
Query: 273 GLMPSEVTFSYVL-GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
G+ P+ T ++L G GR+LHS I+K+GF + ++ +LDFY L+
Sbjct: 62 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI-SS 390
+LK FDEM E + +WN +I + G+ L M+ E PN T+S +L
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
A + +Q H I+ G + ++ + L+D+Y++ G ++ AR+VFD L K+ SW
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVA 241
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
M+ G +++ EA+ ++ M I P F VLSAC I +E G + ++
Sbjct: 242 MISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG-EQLHGLVLKL 300
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G S ++V L+ G A E I S+ + + V + L++G
Sbjct: 301 GFSSDTYVCNALVSLYFHLGSLISA-EHIFSNMSQRDAVTYNTLING 346
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/663 (33%), Positives = 381/663 (57%), Gaps = 1/663 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF +V L+ Y K +++A+ +FD + + ++W+A+I+G++++G EV+
Sbjct: 180 VVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVS 239
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + P+ Y +SAC+ GK+IHG + R G +++ V N +I+
Sbjct: 240 LKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDF 299
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + + + +F+ ++++ +SW ++++ Q H + +F+ + G F C
Sbjct: 300 YLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGC 359
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL +C L L+ G Q+H+ K ++ D FV GLI++YAKC+ L A +VF +
Sbjct: 360 TSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAA 419
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +++A+I GY++ K EA+DLF +M S P+ +TF +LG + + Q+
Sbjct: 420 INVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQI 479
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H LIIK G S +F + ++D YSKC + ++ F+E+ + D+V WNA+ +G+
Sbjct: 480 HCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLEN 539
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
E+++L KD+ PN +T++ ++ +S+I ++ G+Q H ++K G D + + ++L
Sbjct: 540 EESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSL 599
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAKCG + ++ K F + +++ WN+M+ YAQHG +ALE++ M +KPN
Sbjct: 600 VDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNY 659
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+G+LSAC H GL++ G+H+F SM + GI P +DH A +V L G+ A EF+K
Sbjct: 660 VTFVGLLSACSHAGLLDLGFHHFESMSK-FGIEPGIDHYACMVSLLGRAGKIYEAKEFVK 718
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
PI+P VVWR LLS C+ + LG YAAE +S DP D+ ++I+LSN++A MW
Sbjct: 719 KMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWAS 778
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
VR+ M + K+ G SW E+ N++H F A + V++ L + + GY
Sbjct: 779 VRMVREKMDMSRVVKEPGWSWIEVNNEVHRFIARDTAHRDSTLISLVLDNLILQIKGFGY 838
Query: 661 VPD 663
VP+
Sbjct: 839 VPN 841
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 181/565 (32%), Positives = 304/565 (53%), Gaps = 4/565 (0%)
Query: 1 MITSGFHP-NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV 59
++ GFH +V N LL Y K + +DAQKLFD MP RN+++WS+++S ++Q G
Sbjct: 77 IVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVE 136
Query: 60 ALNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
AL F R M C +PN Y V AC G+ ++HG + + G + +V LI
Sbjct: 137 ALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLI 196
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+ Y K G + A+ +FD + +++W ++++ Y + G LK+F R+ V +
Sbjct: 197 DFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRY 256
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+SVL AC++L L+ G QIH V + + D V G+I+ Y KC K+ ++F+ +
Sbjct: 257 VISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRL 316
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +W+ +I G Q +A+DLFV+M G P + VL + ++ GR
Sbjct: 317 VDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGR 376
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+ IK+ + FV N ++D Y+KC+ L + K FD + +VVS+NA+I G+
Sbjct: 377 QVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQD 436
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA++L ++M P L T+ ++L +SS + +E Q HC I+K G + GS
Sbjct: 437 KLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGS 496
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+D+Y+KC + DAR VF+ + +++V WN M GY+Q E+L++Y +Q +++KP
Sbjct: 497 ALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKP 556
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N+ TF V++A +I + G + N +I+ G+ S+V ++A G +++
Sbjct: 557 NEFTFAAVIAAASNIASLRHGQQFHNQVIK-MGLDDDPFVTNSLVDMYAKCGSIEESHKA 615
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKD 563
SS + + W ++S H D
Sbjct: 616 F-SSTNQRDIACWNSMISTYAQHGD 639
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/662 (32%), Positives = 380/662 (57%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G +V N +L MY K I +A+++FD+M +++V+SW+ I G++ G E A
Sbjct: 153 MQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAF 212
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M + PN TY+ ++A +S + GK +H R+ +G E ++ V L+ MY
Sbjct: 213 EIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMY 272
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + VF+ + R+ I+W +++ + G +++ ++ GV ++ +
Sbjct: 273 AKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYV 332
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L AC L G +IHS V K D V LI++Y++C + A VF +
Sbjct: 333 ILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRK 392
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W+A+IGG A+ G EA+ ++ +M +G+ P+ VT++ +L A + GR++H
Sbjct: 393 DVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIH 452
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+++ G ++ V NT+++ YS C ++++ + FD M + D+V++NA+I G+ A
Sbjct: 453 QQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGK 512
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA++L + EG P+ TY N+LN ++ ++EW ++ H + K GF S+ +G+ALV
Sbjct: 513 EALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALV 572
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
YAKCG +DA VF+ ++ +N++SWN ++ G AQHG G++AL+++ M+ +KP+
Sbjct: 573 STYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIV 632
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ +LSAC H GL+EEG YF SM +D I P ++H +V L GQ A IK+
Sbjct: 633 TFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKT 692
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P + N +W LL C+ H ++ + AAE L D ++ ++ LS++YA A MWD
Sbjct: 693 MPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSA 752
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
AK+RK+M+++ + K+ G SW ++ +K+HYF + Q ++ +++L+ + GYV
Sbjct: 753 AKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYV 812
Query: 662 PD 663
PD
Sbjct: 813 PD 814
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 307/557 (55%), Gaps = 6/557 (1%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPEVALNYFR 65
P+ T N L+ MY++ I +A++++ ++ ER V SW+A++ G+ Q G E AL R
Sbjct: 56 PDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLR 115
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M L P+ T + +S+C S G G+EIH + ++GL + V+NC++NMY KCG
Sbjct: 116 QMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCG 175
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ A+ VFD +++ +SW + Y CG +IF + GV + + SVL
Sbjct: 176 SIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLN 235
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
A + LK G +HS + E D V L+ +YAKC +VF + DL A
Sbjct: 236 AFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA 295
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ +IGG A+ G EA +++ +M G+MP+++T+ +L A + G+++HS +
Sbjct: 296 WNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVA 355
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K GF+S V N ++ YS+C ++++ FD+M DV+SW A+I G S EA+
Sbjct: 356 KAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALT 415
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
+ ++M G PN TY++ILN S A+EWG++ H +V+ G ++ +G+ LV+MY+
Sbjct: 416 VYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYS 475
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
CG + DAR+VFD + +++V++N M+ GYA H LG+EAL+++ +QE +KP+ T+I
Sbjct: 476 MCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYIN 535
Query: 486 VLSACVHIGLVEEGW-HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
+L+AC + G +E W ++++R G ++V +A G A +
Sbjct: 536 MLNACANSGSLE--WAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDA-SIVFEKMT 592
Query: 545 EPNKVVWRCLLSGCKTH 561
+ N + W ++ G H
Sbjct: 593 KRNVISWNAIIGGSAQH 609
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/500 (29%), Positives = 263/500 (52%), Gaps = 7/500 (1%)
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+ N Y+ + C D +G+++H + + + + N LINMY +CG + A+
Sbjct: 20 QVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQ 79
Query: 133 VFD--ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
V+ + +ER SW +++ Y Q G LK+ ++ G+A + S L +C
Sbjct: 80 VWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSP 139
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G L+ G +IH + L FD VA ++N+YAKC ++ A VF ++ + +W+ I
Sbjct: 140 GALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITI 199
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
GGYA G++ A ++F KM G++P+ +T+ VL AF+ G+ +HS I+ G
Sbjct: 200 GGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHE 259
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S T V ++ Y+KC ++ + F+++ D+++WN +I G ++ EA E+ M
Sbjct: 260 SDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQM 319
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
EG PN TY +LN + A+ WGK+ H + K GF S++ + +AL+ MY++CG +
Sbjct: 320 QREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSI 379
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
DAR VFD + K+++SW M+ G A+ G G EAL +Y MQ+ ++PN T+ +L+AC
Sbjct: 380 KDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNAC 439
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
+E G + + + G++ ++V++++ G + A + I+ + V
Sbjct: 440 SSPAALEWG-RRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVF-DRMIQRDIVA 497
Query: 551 WRCLLSGCKTHKDLVLGRYA 570
+ ++ G H LG+ A
Sbjct: 498 YNAMIGGYAAHN---LGKEA 514
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 239/461 (51%), Gaps = 2/461 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + L+ MY K D +++F+++ R++I+W+ +I G ++ G E A
Sbjct: 253 ILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEA 312
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M + PN TYV ++AC + GKEIH R+ ++G + V N LI+M
Sbjct: 313 SEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISM 372
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG + A+ VFD + ++ ISW +++ + G L ++ +++GV + +
Sbjct: 373 YSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTY 432
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L AC+ L+ G +IH V + L D V L+N+Y+ C + A +VF +
Sbjct: 433 TSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQ 492
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ A++A+IGGYA EA+ LF ++ GL P +VT+ +L A A+ R++
Sbjct: 493 RDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREI 552
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+L+ K GF S T V N ++ Y+KC ++ F++M + +V+SWNA+I G
Sbjct: 553 HTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRG 612
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
+A++L + M EG P++ T+ ++L+ S +E G++ C + + +
Sbjct: 613 QDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGC 672
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+VD+ + G+L++A + + N W +L HG
Sbjct: 673 MVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHG 713
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 231/464 (49%), Gaps = 42/464 (9%)
Query: 169 RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
++ G ++ +L C + +L G Q+H + + D++ LIN+Y +C +
Sbjct: 15 QQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSI 74
Query: 229 DLASRVFSNIQLPDLT--AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
+ A +V+ + + T +W+A++ GY Q G +A+ L +M GL P T L
Sbjct: 75 EEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLS 134
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
+ GR++H ++ G VAN +L+ Y+KC +EE+ + FD+M++ VVS
Sbjct: 135 SCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVS 194
Query: 347 WNALIAGHLASCHYGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
W I G+ A C E A E+ + M EG PN TY ++LN S A++WGK H I
Sbjct: 195 WTITIGGY-ADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRI 253
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
+ G +S+ +G+ALV MYAKCG D R+VF+ L +++L++WNTM+ G A+ G EA
Sbjct: 254 LNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEAS 313
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
E+Y+ MQ + PN T++ +L+ACV+ + G +S + G + + +++ +
Sbjct: 314 EVYNQMQREGVMPNKITYVILLNACVNSAALHWG-KEIHSRVAKAGFTSDIGVQNALISM 372
Query: 526 FACRGQTRRA----------------------------------YEFIKSSPIEPNKVVW 551
++ G + A Y+ ++ + +EPN+V +
Sbjct: 373 YSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTY 432
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI--MLSNVYA 593
+L+ C + L GR ++++ T AH+ L N+Y+
Sbjct: 433 TSILNACSSPAALEWGRRIHQQVVEAGLA-TDAHVGNTLVNMYS 475
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 127/230 (55%), Gaps = 2/230 (0%)
Query: 262 AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
A+D+ + G + + +L +VK+ + GRQ+H II+ + N +++
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 322 FYSKCELLEESLKTFDEMD--EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
Y +C +EE+ + + ++ E V SWNA++ G++ + +A++LL+ M G P+
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
T + L+ A+EWG++ H ++ G +V + + +++MYAKCG + +AR+VFD
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ K++VSW + GYA G A EI+ M++ + PN T+I VL+A
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNA 236
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/638 (35%), Positives = 372/638 (58%), Gaps = 7/638 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + F P + N+LL MY K + A+KLFD MP+RNV+SW++LISG++Q+G
Sbjct: 45 MIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEV 104
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+N F+ L + +T+ A+S C D R G+ IH + SGL ++N LI+M
Sbjct: 105 MNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDM 164
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A+ VF+++ E +S+SW SL++ Y + G + L++ + + G+ ++ ++
Sbjct: 165 YCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYAL 224
Query: 181 ASVLGACA--VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S L AC +++ G +H K L+ D V L++ YAK L+ A+++F +
Sbjct: 225 GSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLM 284
Query: 239 QLPDLTAWSALIGGYAQLGK-----ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
P++ ++A+I G+ Q+ A EA+ LF +M S G+ PSE TFS +L A + ++
Sbjct: 285 PDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEA 344
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+Q+H+ I K S F+ N +++ YS +E+ LK F + DVVSW +LI G
Sbjct: 345 FECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVG 404
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
H+ + + + L ++LF G P+ +T S +L+ +++ A++ G+Q H +K G +
Sbjct: 405 HVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNF 464
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+I ++ + MYAKCG ++ A F + ++VSW+ M+ AQHG +EA++++ +M+
Sbjct: 465 TIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKG 524
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+ I PN TF+GVL AC H GLVEEG YF M +DHGI+P + H A +V L G+
Sbjct: 525 SGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLA 584
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A FI S E + V+WR LLS C+ HK G+ AE+++ +PE +++++L N+Y
Sbjct: 585 EAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYN 644
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+A + ++R +MK++ +KK+ G SW E+ N +H F
Sbjct: 645 DAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSF 682
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 152/493 (30%), Positives = 239/493 (48%), Gaps = 13/493 (2%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TY V G GK H M ++ + + N L+ MY KCG A+ +FD
Sbjct: 21 TYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRM 80
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+RN +SW SL+S Y Q G + + +F +R S + + +F+ ++ L C +L++G
Sbjct: 81 PKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGR 140
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
IH+L+ L + LI++Y KC ++D A VF + D +W++LI GY ++G
Sbjct: 141 LIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIG 200
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGA----FADVKETIGGRQLHSLIIKMGFSSFT 313
E + L VKM GL + L A F+ E G+ LH +K+G
Sbjct: 201 SNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIEC--GKMLHGCAVKLGLDLDV 258
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL-----ASCHYGEAIELLK 368
V +LD Y+K LE++ K F M + +VV +NA+IAG L A EA+ L
Sbjct: 259 VVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFF 318
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+M G P+ +T+S+IL S I A E GKQ H I K S+ IG+ALV++Y+ G
Sbjct: 319 EMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 378
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ D K F ++VSW +++VG+ Q+G L ++ + + KP++ T +LS
Sbjct: 379 SIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 438
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC ++ V+ G I+ GI S + ++A G A K + P+
Sbjct: 439 ACANLAAVKSGEQIHAYAIKT-GIGNFTIIQNSQICMYAKCGDIDSANMTFKETK-NPDI 496
Query: 549 VVWRCLLSGCKTH 561
V W ++S H
Sbjct: 497 VSWSVMISSNAQH 509
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 206/430 (47%), Gaps = 17/430 (3%)
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G+ + + ++ G+L G H + K + F+ L+ +Y KC + D+A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
++F + ++ +W++LI GY Q+G E ++LF + S L + TFS L
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
+ GR +H+LI G + N+++D Y KC ++ + F+ DE D VSWN+LI
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 193
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL-----NISSDIPAIEWGKQTHCCIV 406
AG++ E + LL ML G N Y + L N SS +IE GK H C V
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSS---SIECGKMLHGCAV 250
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ-----HGLG 461
K G D +VV+G+AL+D YAK G L DA K+F + N+V +N M+ G+ Q
Sbjct: 251 KLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFA 310
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
EA+ ++ MQ +KP++ TF +L AC I E G ++ I + + +
Sbjct: 311 NEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECG-KQIHAQIFKYNLQSDEFIGNA 369
Query: 522 VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL--STDP 579
+V L++ G + S+P + + V W L+ G + G ++L P
Sbjct: 370 LVELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKP 428
Query: 580 EDTSAHIMLS 589
++ + IMLS
Sbjct: 429 DEFTISIMLS 438
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/647 (33%), Positives = 375/647 (57%), Gaps = 7/647 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N ++ +Y++ A+++F +MP R+ ++++ LISG +Q G E AL F
Sbjct: 173 GFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIF 232
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M L P+ T ++ACAS GD + G ++H ++++G+ + + L+++Y KC
Sbjct: 233 EEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKC 292
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + +A +F++S N + W +L ++ Q + ++F + +G+ ++F+ +L
Sbjct: 293 GDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCIL 352
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C + +G QIHSL K E D +V+ LI++Y+K L+ A RV ++ D+
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+++I GY Q +A+ F +M G+ P + + + A + G Q+H+ I
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
G+S + N +++ Y++C + E+ +F+EM+ D ++ N L++G S + EA+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEAL 532
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ M G N++T+ + L+ S+++ I+ GKQ H ++K G +G+AL+ +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG DA+ F +S +N VSWNT++ +QHG G EAL+++ M++ IKPND TFI
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVL+AC H+GLVEEG YF SM ++GI PR DH A V+ +F GQ RA +FI+ PI
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPI 712
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+ +VWR LLS CK HK++ +G +AA+ +L +P D++++++LSN YA W +V
Sbjct: 713 AADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQV 772
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
RK+M+++ ++K+ G SW E++N +H F F G LH + Q+
Sbjct: 773 RKMMRDRGVRKEPGRSWIEVKNVVHAF-------FVGDRLHPLAEQI 812
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 168/561 (29%), Positives = 307/561 (54%), Gaps = 4/561 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+T G I N L+ +Y K + A+++F+E+ R+ +SW A++SG++Q G+ E AL
Sbjct: 69 VTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEAL 128
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+R M + P Y +S+C G+ IH + Y+ G V N +I +Y
Sbjct: 129 GLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLY 188
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+CG A+ VF R+++++ +L+S + QCG H L+IF + SG++ + +
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L ACA LG+L+ G Q+HS +FK + D + L++LY KC ++ A +F++
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+ ++ + Q+ ++ +LF +M ++G+ P++ T+ +L +E G Q+H
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
SL +K GF S +V+ ++D YSK LE++ + + + E DVVSW ++IAG++
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A+ K+M G P+ ++ ++ + I A+ G Q H I G+ +V I +ALV
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALV 488
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
++YA+CGR+ +A F+ + K+ ++ N ++ G+AQ GL EAL+++ M ++ +K N
Sbjct: 489 NLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA-YEFIK 540
TF+ LSA ++ +++G +I+ G S + +++ L+ G A EF +
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSE 607
Query: 541 SSPIEPNKVVWRCLLSGCKTH 561
S E N+V W +++ C H
Sbjct: 608 MS--ERNEVSWNTIITSCSQH 626
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 238/458 (51%), Gaps = 6/458 (1%)
Query: 82 AVSACASRGDARSGK---EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
A+ AC RG+ R + EIH + GL V N LI++Y K GL+ A+ VF+
Sbjct: 47 ALRAC--RGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELS 104
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
R+++SWV++LS Y Q G L ++ ++GV + + +SVL +C G
Sbjct: 105 ARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRL 164
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
IH+ +K + FV +I LY +C LA RVF ++ D ++ LI G+AQ G
Sbjct: 165 IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
A+++F +M SGL P VT S +L A A + + G QLHS + K G SS + +
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+LD Y KC +E +L F+ D +VV WN ++ ++ EL M G PN
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
+TY IL + I+ G+Q H VK GF+S++ + L+DMY+K G L AR+V +
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
L K++VSW +M+ GY QH ++AL + MQ+ I P++ +S C I + +
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
G ++ I G S + ++V+L+A G+ R A+
Sbjct: 465 GLQ-IHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 147/541 (27%), Positives = 254/541 (46%), Gaps = 26/541 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +G + I LL +YVK + A +F+ NV+ W+ ++ F QI +
Sbjct: 270 LFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKS 329
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M + PN +TY + C + G++IH ++G E + +VS LI+M
Sbjct: 330 FELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDM 389
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A+ V + E++ +SW S+++ Y Q L F +K G+
Sbjct: 390 YSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGL 449
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS + CA + ++ G+QIH+ ++ D + L+NLYA+C ++ A F ++L
Sbjct: 450 ASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMEL 509
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D + L+ G+AQ G EA+ +F++M SG+ + TF L A A++ E G+Q+
Sbjct: 510 KDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQI 569
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK G S T V N ++ Y KC E++ F EM E + VSWN +I
Sbjct: 570 HARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRG 629
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVV 415
EA++L M EG PN T+ +L S + +E G + ++P D
Sbjct: 630 LEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC 689
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +D++ + G+L+ A+K + + + + + W T+L H + +E+ ++
Sbjct: 690 V----IDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVH----KNIEVGEFAAKH 741
Query: 475 --KIKPNDNTFIGVLSACVHIGLVEEGW---HYFNSMIRDHGISPRMDH----IASVVHL 525
+++P+D+ +LS V E W M+RD G+ + +VVH
Sbjct: 742 LLELEPHDSASYVLLSNAY---AVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHA 798
Query: 526 F 526
F
Sbjct: 799 F 799
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/653 (33%), Positives = 380/653 (58%), Gaps = 11/653 (1%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P+V+ L VK R+ DA LFD MP +NV++W++++SG+++ G PE AL F M
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADM 105
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
V + PN + A+ ACA G R+G+++H R+G ++ + +CLI MY +CG L
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+A+ VFD + + + SL+S++C+ GE + + K G+ +E + ++L AC
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC 225
Query: 188 AVLGNLKVGMQIHS-LVFKCALEFDK-FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
+ +G QIH L+ K L + + LI+ Y++ + LA VF ++ ++ +
Sbjct: 226 PRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVS 281
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQLHSLI 304
W +++ Y + G+ EA+ +F M S G+ P+E S VLGA +IG GRQLH
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG----SIGLGRQLHCSA 337
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK + V+N +L Y + L+EE ++++ D+VSW I+ + + +AI
Sbjct: 338 IKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAI 397
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
LL M EG PN Y +S++L+ +D+ +++ G Q HC +K G DS + G+AL++MY
Sbjct: 398 ALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMY 457
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+KCG++ AR FD + + ++ SWN+++ G+AQHG +ALE++S M+ N IKP+D+TF+
Sbjct: 458 SKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFL 517
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVL C H G+VEEG +F MI + +P H A ++ + G+ A I P
Sbjct: 518 GVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPF 577
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP+ ++W+ LL+ CK H++L +G+ AA++++ D+++++++SN+YA W++ KV
Sbjct: 578 EPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKV 637
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
R+ M E +KKD GCSW E+ N++H F++ + +++++ +L + D
Sbjct: 638 RRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 690
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 225/461 (48%), Gaps = 11/461 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + + L+ MY + + A+++FD M +V+ +++LIS F + G E+A
Sbjct: 141 VRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAA 200
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNS-HVSNCLIN 119
M+ L+PN +T ++AC G++IHG + + GL S + S LI+
Sbjct: 201 EALIQMLKQGLKPNEHTMTTILTACPR----VLGQQIHGYLIKKIGLRSQSVYSSTALID 256
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y + G A+ VFD+ +N +SW S++ Y + G L++F GV +EF+
Sbjct: 257 FYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFA 316
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ VLGAC G++ +G Q+H K L D V+ L+++Y + ++ + + I+
Sbjct: 317 LSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIE 373
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PDL +W+ I Q G +AI L +M S G P+ FS VL + ADV G Q
Sbjct: 374 NPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ 433
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H L +K+G S N +++ YSKC + + FD M HDV SWN+LI GH
Sbjct: 434 FHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGD 493
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-THCCIVKPGFDSNVVIGS 418
+A+E+ M G P+ T+ +L + +E G+ I + F +
Sbjct: 494 ANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYA 553
Query: 419 ALVDMYAKCGRLNDA-RKVFDHLSSKNLVSWNTMLVGYAQH 458
++DM + GR ++A R + D + + W T+L H
Sbjct: 554 CMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH 594
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 151/292 (51%), Gaps = 6/292 (2%)
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
CA D + +N K +L A +F + ++ AW++++ GY + G+ A+ +
Sbjct: 42 CAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAM 101
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F M SG+ P++ + L A AD+ G Q+HSL ++ GF+ ++ + +++ YS+
Sbjct: 102 FADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSR 161
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C L + + FD MD DVV + +LI+ + + A E L ML +G PN +T + I
Sbjct: 162 CGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTI 221
Query: 386 LNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS-ALVDMYAKCGRLNDARKVFDHLSSK 443
L + G+Q H ++K G S V S AL+D Y++ G A+ VFD L K
Sbjct: 222 LTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCK 277
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
N+VSW +M+ Y + G EAL+++ M + PN+ VL AC IGL
Sbjct: 278 NVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL 329
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/628 (36%), Positives = 358/628 (57%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG 95
MP+RN +S+ LI G+ Q + ++ F + E N + + + S A
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
+H +Y+ G E N+ V LI+ Y CG ++SA+ FDA ++ +SW +++ Y +
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
L++F R G + F+ A VL AC L VG +H V K E D +V
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
+GL++LY K + RVF + D+ WS +I YAQ ++ EA++LF +M + ++
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P++ TF+ VL + A ++ G+Q+H ++K+G FV+N ++D Y+KC L+ S+K
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F E+ + V+WN +I G++ S +A+ L K+ML + TYS++L + + A+
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
E G Q H +K +D +VV+G+AL+DMYAKCG + +AR VFD LS ++ +SWN M+ GY
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGY 420
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
+ HGL EAL+ + MMQE + PN TF+ +LSAC + GL++ G +YF SM++D+GI P
Sbjct: 421 SMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPC 480
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL 575
M+H +V L G +A + I+ P+EPN VWR LL C H D+ LG +A++IL
Sbjct: 481 MEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQIL 540
Query: 576 STDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSR 635
DP+D + H++LSN+YA W+ A VRK MK K +KK+ G SW E Q +HYFS
Sbjct: 541 QIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGD 600
Query: 636 FAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ + ++ L++ GYVPD
Sbjct: 601 TSHPDMKMISGMLEWLNMKTEKAGYVPD 628
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 247/479 (51%), Gaps = 6/479 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N L+ Y +N A++ FD + ++++SW+ +++ +++ + +L F
Sbjct: 71 GHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLF 130
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M PN++T+ G + AC GK +HG + ++ E++ +V L+++Y K
Sbjct: 131 AEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKF 190
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + VF+ + + I W ++S Y Q + +++F R++ V ++F+ ASVL
Sbjct: 191 GDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVL 250
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+CA + NL++G Q+H V K L+ + FV+ L+++YAKC +LD + ++F + +
Sbjct: 251 QSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEV 310
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+ +I GY Q G +A+ L+ M + SEVT+S VL A A + G Q+HSL
Sbjct: 311 TWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLS 370
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K + V N ++D Y+KC ++ + FD + E D +SWNA+I+G+ GEA+
Sbjct: 371 LKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEAL 430
Query: 365 ELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVD 422
+ + M+ E C PN T+ +IL+ S+ ++ G+ +V+ G + + + +V
Sbjct: 431 KAFQ-MMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVW 489
Query: 423 MYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ + G L+ A K+ + + N+ W +L H L I S Q +I P D
Sbjct: 490 LLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIH--NDVDLGIMSAQQILQIDPQD 546
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/662 (35%), Positives = 369/662 (55%), Gaps = 8/662 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEM----PERNVISWSALISGFSQIGMPEVALNYF 64
+V N L+ +Y F +++A+++FDE ERN +SW+ +IS + + A+ F
Sbjct: 134 DVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVF 193
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R MV PN + + V+AC D +G+++HG + R+G E + +N L++MY K
Sbjct: 194 REMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKL 253
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A VF+ + +SW + +S G L++ L + SG+ + F+ +SVL
Sbjct: 254 GDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVL 313
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA G +G QIH + K +FD+FVA+GL+++YAK LD A +VF + DL
Sbjct: 314 KACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLI 373
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLM--PSEVTFSYVLGAFADVKETIGGRQLHS 302
W+ALI G + G+ E + LF +M GL + T + VL + A + RQ+H+
Sbjct: 374 LWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHA 433
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
L K+G S + V N ++D Y KC L+ ++K F E D++S ++ L+ C +GE
Sbjct: 434 LAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTA-LSQCDHGE 492
Query: 363 -AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
AI+L ML +G P+ + S++LN + + A E GKQ H ++K F S+V G+ALV
Sbjct: 493 DAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALV 552
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
YAKCG + DA F L + +VSW+ M+ G AQHG G+ AL+++ M + + PN
Sbjct: 553 YAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHI 612
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
T VLSAC H GLV++ YF SM GI +H A ++ + G+ A E + +
Sbjct: 613 TLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNN 672
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P + N VW LL + H+D LGR AAEK+ + +PE + H++L+N YA A MWDE
Sbjct: 673 MPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEM 732
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
AKVRK+MK+ ++KK+ SW E+++K+H F + D++ + +L + GYV
Sbjct: 733 AKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYV 792
Query: 662 PD 663
P+
Sbjct: 793 PN 794
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 182/609 (29%), Positives = 304/609 (49%), Gaps = 22/609 (3%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
NHLL +Y + + A+ +FDE+P+ +SWS+L++ +S GMP AL FR M +
Sbjct: 41 NHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVP 100
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N + + V CA D R G ++H + L + V+N L+ +YG G++ A+ +
Sbjct: 101 CNEFA-LPVVLKCAP--DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRM 157
Query: 134 FDASL----ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
FD + ERN++SW +++S+Y + + + +F SG +EF + V+ AC
Sbjct: 158 FDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTG 217
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
+L+ G Q+H V + E D F A L+++Y+K +++A+ VF + D+ +W+A
Sbjct: 218 SRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAF 277
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I G G A++L ++M SSGL+P+ T S VL A A GRQ+H ++K
Sbjct: 278 ISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVA 337
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
FVA ++D Y+K L+++ K FD M D++ WNALI+G +GE + L
Sbjct: 338 DFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHR 397
Query: 370 MLFEG--HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M EG N T +++L ++ AI +Q H K G S+ + + L+D Y KC
Sbjct: 398 MRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKC 457
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G+L+ A KVF S +++S TM+ +Q G +A++++ M ++P+ +L
Sbjct: 458 GQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLL 517
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA--SVVHLFACRGQTRRAYEFIKSSPIE 545
+AC + E+G +I+ S D A ++V+ +A G A P E
Sbjct: 518 NACTSLSAYEQGKQVHAHLIKRQFTS---DVFAGNALVYAYAKCGSIEDADMAFSGLP-E 573
Query: 546 PNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSA-HIMLSNVYAEAN---MWDET 601
V W ++ G H G+ A + E + HI L++V + N + D+
Sbjct: 574 RGIVSWSAMIGGLAQHGH---GKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDA 630
Query: 602 AKVRKIMKE 610
K + MKE
Sbjct: 631 KKYFESMKE 639
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 163/520 (31%), Positives = 250/520 (48%), Gaps = 49/520 (9%)
Query: 84 SACASRGDARS---GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
SA A G +RS G +H + +SGL + SN L+ +Y +C L S+A+ VFD +
Sbjct: 9 SALARFGTSRSLFAGAHLHSHLLKSGLL--AGFSNHLLTLYSRCRLPSAARAVFDEIPDP 66
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
+SW SL+++Y G L F R GV +EF+ VL CA +++ G Q+H
Sbjct: 67 CHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVL-KCAP--DVRFGAQVH 123
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI----QLPDLTAWSALIGGYAQL 256
+L L D FVA L+ +Y +D A R+F + +W+ +I Y +
Sbjct: 124 ALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKN 183
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
++ +AI +F +M SG P+E FS V+ A ++ GRQ+H +++ G+ F A
Sbjct: 184 DQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTA 243
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
N ++D YSK +E + F++M DVVSWNA I+G + H A+ELL M G
Sbjct: 244 NALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLV 303
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
PN++T S++L + A G+Q H +VK D + + LVDMYAK G L+DARKV
Sbjct: 304 PNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKV 363
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN--KIKPNDNTFIGVLSAC---- 490
FD + ++L+ WN ++ G + G E L ++ M++ + N T VL +
Sbjct: 364 FDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSE 423
Query: 491 -------VH-----IGLVEEGWHYFNSMIR--------DHGIS----PRMDHIASVVHLF 526
VH IGL+ + H N +I D+ I R D I S +
Sbjct: 424 AICHTRQVHALAEKIGLLSDS-HVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMM 482
Query: 527 ACRGQTRRAYEFIK------SSPIEPNKVVWRCLLSGCKT 560
Q + IK +EP+ V LL+ C +
Sbjct: 483 TALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTS 522
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 238/482 (49%), Gaps = 7/482 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ +V T N L+ MY K I A +F++MP +V+SW+A ISG G A
Sbjct: 231 VVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRA 290
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M L PN +T + ACA G G++IHG M ++ + + V+ L++M
Sbjct: 291 LELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDM 350
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG--VAISEF 178
Y K G L A+ VFD R+ I W +L+S G H L +F RK G + ++
Sbjct: 351 YAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRT 410
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ ASVL + A + Q+H+L K L D V GLI+ Y KC +LD A +VF
Sbjct: 411 TLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKES 470
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ D+ + + ++ +Q +AI LFV+M GL P S +L A + G+
Sbjct: 471 RSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGK 530
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+ +IK F+S F N ++ Y+KC +E++ F + E +VSW+A+I G
Sbjct: 531 QVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHG 590
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIG 417
H A++L ML EG PN T +++L+ + ++ K+ + + G D
Sbjct: 591 HGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHY 650
Query: 418 SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQE 473
+ ++D+ + G+L DA ++ +++ N W +L H LGR A E ++
Sbjct: 651 ACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEP 710
Query: 474 NK 475
K
Sbjct: 711 EK 712
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/650 (33%), Positives = 373/650 (57%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ +Y + A+K+F +M ++ +S+++LISG +Q G + AL F M L+
Sbjct: 252 NALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLK 311
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ T +SACAS G G+++H + ++G+ + V L+++Y C + +A +
Sbjct: 312 PDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEM 371
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F + N + W +L ++ + +IF + G+ ++F+ S+L C +G L
Sbjct: 372 FLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGAL 431
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G QIH+ V K +F+ +V LI++YAK KLD A + + D+ +W+ALI GY
Sbjct: 432 DLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGY 491
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
AQ EA+ F +M + G+ + FS + A A ++ GRQ+H+ G+S
Sbjct: 492 AQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDL 551
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ N ++ Y++C ++E+ F+++D D +SWN LI+G S + +A+++ M
Sbjct: 552 SIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRA 611
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
+ +T+ + ++ +++I I+ GKQ H I+K GFDS++ + +AL+ YAKCG + DA
Sbjct: 612 KLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDA 671
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
R+ F + KN VSWN M+ GY+QHG G EA+ ++ M++ PN TF+GVLSAC H+
Sbjct: 672 RREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHV 731
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLV +G YF SM ++HG+ P+ H A VV L + G RA +FI+ PIEP+ +WR
Sbjct: 732 GLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRT 791
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LLS C HK++ +G +AA+ +L +PED++ +++LSN+YA + WD + R++M+ + +
Sbjct: 792 LLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGV 851
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
KK+ G SW E++N +H F ++E + +L+ + GY D
Sbjct: 852 KKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQD 901
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 288/555 (51%), Gaps = 5/555 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N L+ +Y ++ K+F++MP R+V SW +ISGF + M L+ F
Sbjct: 40 GFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLF 99
Query: 65 RLMVCCVLEPNYYTYVGAVSACAS-RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
M+ + P ++ + AC+ R R ++IH R+ GL + +SN LI +Y K
Sbjct: 100 SCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAK 159
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
GL+ SA+ VFD ++S+SWV+++S + Q G + +F +G+ + + +SV
Sbjct: 160 NGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSV 219
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L C + VG Q+H+LVFK + +V L+ LY++ A +VFS +Q D
Sbjct: 220 LSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDE 279
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
++++LI G AQ G + A++LF KM L P VT + +L A A G QLHS
Sbjct: 280 VSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSY 339
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+IK G SS V +LD Y C ++ + + F +VV WN ++ + E+
Sbjct: 340 VIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSES 399
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ + M +G PN +TY +IL + + A++ G+Q H ++K GF NV + S L+DM
Sbjct: 400 FRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDM 459
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
YAK G+L+ A + L+ ++VSW ++ GYAQH L EAL+ + M I+ ++ F
Sbjct: 460 YAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGF 519
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY-EFIKSS 542
+SAC I + +G ++ G S + ++V L+A G+ + AY EF K
Sbjct: 520 SSAISACAGIQALNQG-RQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKID 578
Query: 543 PIEPNKVVWRCLLSG 557
+ + W L+SG
Sbjct: 579 A--KDSISWNGLISG 591
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/561 (28%), Positives = 288/561 (51%), Gaps = 2/561 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G + I N L+ +Y K I A+K+FD + ++ +SW A+ISGFSQ G E A
Sbjct: 138 IICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEA 197
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F M + P Y + +S C G+++H +++ G L ++V N L+ +
Sbjct: 198 IHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTL 257
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + SA+ VF ++ +S+ SL+S Q G L++F ++ + +
Sbjct: 258 YSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTV 317
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L ACA G L G Q+HS V K + D V L++LY C + A +F Q
Sbjct: 318 ASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQT 377
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+ ++ + +L E+ +F +M GL+P++ T+ +L V G Q+
Sbjct: 378 ENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQI 437
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK GF +V + ++D Y+K L+ + + E DVVSW ALI+G+ +
Sbjct: 438 HTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLF 497
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA++ K+ML G + +S+ ++ + I A+ G+Q H G+ ++ IG+AL
Sbjct: 498 AEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNAL 557
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V +YA+CGR+ +A F+ + +K+ +SWN ++ G+AQ G +AL++++ M K++ +
Sbjct: 558 VSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASF 617
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF +SA +I +++G ++MI G ++ +++ +A G A
Sbjct: 618 FTFGSAVSAAANIANIKQG-KQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFC 676
Query: 541 SSPIEPNKVVWRCLLSGCKTH 561
P E N V W +++G H
Sbjct: 677 EMP-EKNDVSWNAMITGYSQH 696
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 228/466 (48%), Gaps = 14/466 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G ++I LL +YV S I A ++F NV+ W+ ++ F ++ +
Sbjct: 340 VIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSES 399
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
FR M L PN +TY + C S G G++IH ++ ++G + N +V + LI+M
Sbjct: 400 FRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDM 459
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L +A + E + +SW +L+S Y Q LK F G+
Sbjct: 460 YAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGF 519
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S + ACA + L G QIH+ + D + L++LYA+C ++ A F I
Sbjct: 520 SSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDA 579
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +W+ LI G+AQ G +A+ +F +M + L S TF + A A++ G+Q+
Sbjct: 580 KDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQI 639
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H++IIK GF S V+N ++ FY+KC +E++ + F EM E + VSWNA+I G+ +
Sbjct: 640 HAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYG 699
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-------KQTHCCIVKPGFDSN 413
EA+ L + M G PN T+ +L+ S + + G + H + KP +
Sbjct: 700 NEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYAC 759
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
V VD+ ++ G L+ ARK + + + W T+L H
Sbjct: 760 V------VDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVH 799
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 244/489 (49%), Gaps = 5/489 (1%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
N TY+ + C + G K++HG++ + G S + N L+++Y G L VF
Sbjct: 9 NCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVF 68
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA--VLGN 192
+ R+ SW ++S + + L +F + V+ +E S ASVL AC+ +G
Sbjct: 69 EDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIG- 127
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
++ QIH+ + L ++ LI LYAK + A +VF N+ D +W A+I G
Sbjct: 128 IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISG 187
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
++Q G EAI LF +M ++G+ P+ FS VL +K G QLH+L+ K G S
Sbjct: 188 FSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLE 247
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
T+V N ++ YS+ + K F +M D VS+N+LI+G A+EL M
Sbjct: 248 TYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKR 307
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+ P+ T +++L+ + A+ G+Q H ++K G S++++ AL+D+Y C +
Sbjct: 308 DYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKT 367
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A ++F ++N+V WN MLV + + E+ I+ MQ + PN T+ +L C
Sbjct: 368 AHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTS 427
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
+G ++ G +I+ G + + ++ ++A G+ A+ ++ + E + V W
Sbjct: 428 VGALDLGEQIHTQVIKT-GFQFNVYVCSVLIDMYAKHGKLDTAHVILR-TLTEDDVVSWT 485
Query: 553 CLLSGCKTH 561
L+SG H
Sbjct: 486 ALISGYAQH 494
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 67/121 (55%)
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M G C N TY +L++ + ++ K+ H I+K GF + V+ + LVD+Y G
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L+ KVF+ + ++++ SW+ ++ G+ + + L+++S M E + P + +F VL A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 490 C 490
C
Sbjct: 121 C 121
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/663 (34%), Positives = 378/663 (57%), Gaps = 1/663 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF +V L+++Y K I+ A+ +FD + + ++W+A+I+G+++ G EV+
Sbjct: 168 VIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVS 227
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F LM+ + P+ Y ++AC+ G + GK+IH + RS +++ N LI+
Sbjct: 228 LQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDF 287
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + + + +FD +N ISW ++++ Y Q +++ + G E++C
Sbjct: 288 YTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYAC 347
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+SVL +C + L+ G QIHS V K LE D FV LI++Y+KC LD A RVF +
Sbjct: 348 SSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTC 407
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ ++A+I GY++ G C A+++F +M + PS +TF +LG A + +Q+
Sbjct: 408 HSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQI 467
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H LIIK GFS F ++ ++D YSKC + ++ F+ D+V WN+L +G+
Sbjct: 468 HGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKS 527
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA +L D+ PN +T++ + +S + ++ G+Q H ++K G +S+ I +AL
Sbjct: 528 EEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNAL 587
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAKCG + +A K+F K+ WN+M+ YAQHG EAL ++ M N I PN
Sbjct: 588 VDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNY 647
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ VLSAC H+G VE+G ++NSM R +GI P ++H ASVV L G+ A EFI+
Sbjct: 648 VTFVSVLSACSHVGFVEDGLQHYNSMAR-YGIEPGIEHYASVVTLLGRAGRLTEAREFIE 706
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
I P +VWR LLS C+ ++ L ++AAE +S DP D+ +++MLSN++A MW +
Sbjct: 707 KMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGD 766
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
++R M + K+ G SW E+ ++H F + + ++ +++L+ + D G
Sbjct: 767 VKRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELTTQMKDVGC 826
Query: 661 VPD 663
V D
Sbjct: 827 VHD 829
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/558 (31%), Positives = 297/558 (53%), Gaps = 3/558 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V N LL Y K + DA LFD+MP RN++SWS+++S ++Q+G E AL YF
Sbjct: 70 GLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYF 129
Query: 65 -RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
CV + N Y + AC R G ++H + +SG + +V L+ +Y K
Sbjct: 130 LEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAK 189
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
G + A+ VFD + + ++W ++++ Y + G L++F L +S V ++ +S+
Sbjct: 190 HGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSI 249
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L AC+VLG LK G QIH+ V + + D LI+ Y KC ++ +F + + ++
Sbjct: 250 LNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNI 309
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+ +I GY Q EA++L +MF G P E S VL + V GRQ+HS
Sbjct: 310 ISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSY 369
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+IK+ FV N ++D YSKC L+++ + FD + H VV +NA+I G+ + A
Sbjct: 370 VIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGA 429
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+E+ ++M + P+ T+ ++L +S+ + ++ KQ H I+K GF + SAL+D+
Sbjct: 430 LEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDV 489
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y+KC + DAR VF+ ++K++V WN++ GY EA ++YS +Q ++ +PN+ TF
Sbjct: 490 YSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTF 549
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ +A + + G + N +++ G+ ++V ++A G A E I SS
Sbjct: 550 AALTTAASILASLPHGQQFHNQVMK-MGLESDPFITNALVDMYAKCGSVEEA-EKIFSSS 607
Query: 544 IEPNKVVWRCLLSGCKTH 561
+ + W ++S H
Sbjct: 608 VWKDTACWNSMISMYAQH 625
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 160/573 (27%), Positives = 287/573 (50%), Gaps = 58/573 (10%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
+++H ++ GL+ + +SN L++ Y K G + A +FD RN +SW S++S Y Q
Sbjct: 60 RKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQL 119
Query: 156 GEHVHGLKIFLLSRKSGV-AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
G + L FL +++ V ++E+ AS++ AC + G Q+HS V K D +V
Sbjct: 120 GYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYV 179
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
L+ LYAK ++D A VF + L W+A+I GY + G++ ++ LF M S +
Sbjct: 180 GTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNV 239
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLII----KMGFSSFTFVANTVLDFYSKCELLE 330
+P + S +L A + + GG+Q+H+ ++ KM S++ N ++DFY+KC ++
Sbjct: 240 IPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTY----NVLIDFYTKCGRVK 295
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
FD +D +++SW +IAG++ + + EA+EL+ +M G P+ Y S++L
Sbjct: 296 AGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCG 355
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
+ A++ G+Q H ++K + + + +AL+DMY+KC L+DA++VFD ++ ++V +N
Sbjct: 356 SVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNA 415
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
M+ GY++ G ALE++ M+ + P+ TF+ +L + ++ + +I +
Sbjct: 416 MIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLS-KQIHGLIIKY 474
Query: 511 GISPRMDHIASVVHLF---ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG---------- 557
G S ++++ ++ +C R +E + I VVW L SG
Sbjct: 475 GFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDI----VVWNSLFSGYNLQLKSEEA 530
Query: 558 CKTHKDLVLGR-----------YAAEKILSTDPEDTSAH--IM-------------LSNV 591
K + DL L R A IL++ P H +M L ++
Sbjct: 531 FKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDM 590
Query: 592 YAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
YA+ +E K+ S+ KDT C W +
Sbjct: 591 YAKCGSVEEAEKIF----SSSVWKDTAC-WNSM 618
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+N+L +I + ++ HC +V G +V + + L+ Y K G + DA +FD + +
Sbjct: 44 ANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPN 103
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI-KPNDNTFIGVLSACVHIGLVEEGWH 501
+NLVSW++++ Y Q G +AL + Q + K N+ ++ ACV E G
Sbjct: 104 RNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQ 163
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ +I+ G + S+V L+A G+ +A + + V W +++G
Sbjct: 164 VHSYVIKS-GFGEDVYVGTSLVVLYAKHGEIDKA-RLVFDGLVLKTPVTWTAIITG 217
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/653 (33%), Positives = 380/653 (58%), Gaps = 11/653 (1%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P+V+ L VK R+ DA LFD MP +NV++W++++SG+++ G PE AL F M
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADM 105
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
V + PN + A+ ACA G R+G+++H R+G ++ + +CLI MY +CG L
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+A+ VFD + + + SL+S++C+ GE + + K G+ +E + ++L AC
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC 225
Query: 188 AVLGNLKVGMQIHS-LVFKCALEFDK-FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
+ +G QIH L+ K L + + LI+ Y++ + LA VF ++ ++ +
Sbjct: 226 PRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVS 281
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQLHSLI 304
W +++ Y + G+ EA+ +F M S G+ P+E S VLGA +IG GRQLH
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG----SIGLGRQLHCSA 337
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK + V+N +L Y + L+EE ++++ D+VSW I+ + + +AI
Sbjct: 338 IKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAI 397
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
LL M EG PN Y +S++L+ +D+ +++ G Q HC +K G DS + G+AL++MY
Sbjct: 398 ALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMY 457
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+KCG++ AR FD + + ++ SWN+++ G+AQHG +ALE++S M+ N IKP+D+TF+
Sbjct: 458 SKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFL 517
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVL C H G+VEEG +F MI + +P H A ++ + G+ A I P
Sbjct: 518 GVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPF 577
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP+ ++W+ LL+ CK H++L +G+ AA++++ D+++++++SN+YA W++ KV
Sbjct: 578 EPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKV 637
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
R+ M E +KKD GCSW E+ N++H F++ + +++++ +L + D
Sbjct: 638 RRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 690
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 225/461 (48%), Gaps = 11/461 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + + L+ MY + + A+++FD M +V+ +++LIS F + G E+A
Sbjct: 141 VRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAA 200
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNS-HVSNCLIN 119
M+ L+PN +T ++AC G++IHG + + GL S + S LI+
Sbjct: 201 EALIQMLKQGLKPNEHTMTTILTACPR----VLGQQIHGYLIKKIGLRSQSVYSSTALID 256
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y + G A+ VFD+ +N +SW S++ Y + G L++F GV +EF+
Sbjct: 257 FYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFA 316
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ VLGAC G++ +G Q+H K L D V+ L+++Y + ++ + + I+
Sbjct: 317 LSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIE 373
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PDL +W+ I Q G +AI L +M S G P+ FS VL + ADV G Q
Sbjct: 374 NPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ 433
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H L +K+G S N +++ YSKC + + FD M HDV SWN+LI GH
Sbjct: 434 FHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGD 493
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-THCCIVKPGFDSNVVIGS 418
+A+E+ M G P+ T+ +L + +E G+ I + F +
Sbjct: 494 ANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYA 553
Query: 419 ALVDMYAKCGRLNDA-RKVFDHLSSKNLVSWNTMLVGYAQH 458
++DM + GR ++A R + D + + W T+L H
Sbjct: 554 CMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH 594
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 151/292 (51%), Gaps = 6/292 (2%)
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
CA D + +N K +L A +F + ++ AW++++ GY + G+ A+ +
Sbjct: 42 CAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAM 101
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F M SG+ P++ + L A AD+ G Q+HSL ++ GF+ ++ + +++ YS+
Sbjct: 102 FADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSR 161
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C L + + FD MD DVV + +LI+ + + A E L ML +G PN +T + I
Sbjct: 162 CGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTI 221
Query: 386 LNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS-ALVDMYAKCGRLNDARKVFDHLSSK 443
L + G+Q H ++K G S V S AL+D Y++ G A+ VFD L K
Sbjct: 222 LTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCK 277
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
N+VSW +M+ Y + G EAL+++ M + PN+ VL AC IGL
Sbjct: 278 NVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL 329
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/662 (33%), Positives = 368/662 (55%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF +V+T + L+ MY K +++ A ++F EMPERN++ WSA+I+G+ Q L
Sbjct: 165 IQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGL 224
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M+ + + TY +CA + G ++HG +S +S + ++MY
Sbjct: 225 KLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMY 284
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC +S A VF+ S+ +++ Y + + + L+IF +++ ++ E S +
Sbjct: 285 AKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLS 344
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
L AC+V+ G+Q+H L KC L F+ VA ++++Y KC L A +F +++
Sbjct: 345 GALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERR 404
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +W+A+I + Q + + + LFV M S + P + T+ V+ A A + G ++H
Sbjct: 405 DAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIH 464
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
I+K G FV + ++D Y KC +L E+ K D ++E VSWN++I+G +
Sbjct: 465 GRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSE 524
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
A ML G P+ +TY+ +L++ +++ IE GKQ H I+K S+V I S LV
Sbjct: 525 NAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLV 584
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY+KCG + D+R +F+ ++ V+W+ M+ YA HG G +A++++ MQ +KPN
Sbjct: 585 DMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHT 644
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
FI VL AC H+G V++G HYF M +G+ P M+H + +V L Q A + I+S
Sbjct: 645 IFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIES 704
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
E + V+WR LLS CK ++ + A +L DP+D+SA+++L+NVYA MW E
Sbjct: 705 MHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEV 764
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
AK+R IMK LKK+ GCSW E+++++H F A + +++E + L + GYV
Sbjct: 765 AKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYV 824
Query: 662 PD 663
PD
Sbjct: 825 PD 826
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/593 (29%), Positives = 309/593 (52%), Gaps = 7/593 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H +VI++N ++ Y + + AQ LFD MPER+V+SW++L+S + G+ ++ F
Sbjct: 69 HRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVR 128
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + +Y T+ + AC+ D G ++H + G E + + L++MY KC
Sbjct: 129 MRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKK 188
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A +F ERN + W ++++ Y Q + GLK+F K G+ +S+ + ASV +
Sbjct: 189 LDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRS 248
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA L K+G Q+H K +D + +++YAKC+++ A +VF+ + P ++
Sbjct: 249 CAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSY 308
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+A+I GYA+ + +A+++F + + L E++ S L A + +K + G QLH L +K
Sbjct: 309 NAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVK 368
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G VANT+LD Y KC L E+ FD+M+ D VSWNA+IA H + + + L
Sbjct: 369 CGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSL 428
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
ML P+ +TY +++ + A+ +G + H IVK G + +GSALVDMY K
Sbjct: 429 FVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGK 488
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG L +A K+ D L K VSWN+++ G++ A +S M E + P++ T+ V
Sbjct: 489 CGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATV 548
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L C ++ +E G ++ I + + +++V +++ G + + + +P +
Sbjct: 549 LDVCANMATIELG-KQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP-KR 606
Query: 547 NKVVWRCLLSGCK--THKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
+ V W ++ H + + + ++L+ P T I +S + A A+M
Sbjct: 607 DYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHT---IFISVLRACAHM 656
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 159/643 (24%), Positives = 285/643 (44%), Gaps = 76/643 (11%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC------------ 124
+T+ + C++ GK+ H +M + +V+NCL+ Y K
Sbjct: 7 FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66
Query: 125 -------------------GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF 165
G + AQ +FD ER+ +SW SLLS Y G + ++IF
Sbjct: 67 MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 166 LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC 225
+ R + + + VL AC+ + + +G+Q+H L + E D L+++Y+KC
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186
Query: 226 EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
+KLD A R+F + +L WSA+I GY Q + E + LF M G+ S+ T++ V
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246
Query: 286 GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
+ A + G QLH +K F+ + + LD Y+KC+ + ++ K F+ +
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQ 306
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
S+NA+I G+ +A+E+ + + + + S L S I G Q H
Sbjct: 307 SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLA 366
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
VK G N+ + + ++DMY KCG L +A +FD + ++ VSWN ++ + Q+ + L
Sbjct: 367 VKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTL 426
Query: 466 EIYSMMQENKIKPNDNTFIGVLSAC-----------VHIGLVEEG----WHYFNSMIRDH 510
++ M + ++P+D T+ V+ AC +H +V+ G W ++++ +
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMY 486
Query: 511 G----------ISPRMDHIA-----SVVHLFACRGQTRRAYEFIKS---SPIEPNKVVWR 552
G I R++ S++ F+ + Q+ A + + P+ +
Sbjct: 487 GKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYA 546
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTD-PEDTSAHIMLSNVYAE-ANMWDETAKVRKIMKE 610
+L C + LG+ +IL + D L ++Y++ NM D ++M E
Sbjct: 547 TVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDS-----RLMFE 601
Query: 611 KSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
K+ K+D +W+ + Y Q I L E M L+V
Sbjct: 602 KTPKRDY-VTWSAMICAYAYHGHGE----QAIKLFEEMQLLNV 639
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 185/345 (53%), Gaps = 31/345 (8%)
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+F+ + +L C+ L L G Q H+ + + +VA L+ Y K ++ A +VF
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 237 NIQLPDLTAWSALIGGYAQLGK-----------------------AC--------EAIDL 265
+ D+ +W+ +I GYA++G +C ++I++
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
FV+M S + TFS VL A + +++ G Q+H L I+MGF + + ++D YSK
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C+ L+ + + F EM E ++V W+A+IAG++ + + E ++L KDML G + TY+++
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
+ + A + G Q H +K F + +IG+A +DMYAKC R++DA KVF+ L +
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPR 305
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
S+N ++VGYA+ G +ALEI+ +Q + ++ + G L+AC
Sbjct: 306 QSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTAC 350
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 151/301 (50%), Gaps = 13/301 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG + + L+ MY K + +A+K+ D + E+ +SW+++ISGFS E A
Sbjct: 467 IVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENA 526
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
YF M+ + P+ +TY + CA+ GK+IH ++ + L + ++++ L++M
Sbjct: 527 QRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDM 586
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + ++ +F+ + +R+ ++W +++ +Y G +K+F + V +
Sbjct: 587 YSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIF 646
Query: 181 ASVLGACAVLGNLKVGM---QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
SVL ACA +G + G+ QI + + + M ++L + ++++ A ++ +
Sbjct: 647 ISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCM--VDLLGRSDQVNEALKLIES 704
Query: 238 IQL-PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETI 295
+ D W L+ G +++ K F+S L + + + +YVL A+V +
Sbjct: 705 MHFEADDVIWRTLLSNCKMQGN----VEVAEKAFNSLLQLDPQDSSAYVL--LANVYANV 758
Query: 296 G 296
G
Sbjct: 759 G 759
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/659 (33%), Positives = 366/659 (55%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N L+ +Y + A+ +F M +R+ ++++ LI+G SQ G E A+ F
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M LEP+ T V AC++ G G+++H + G N+ + L+N+Y KC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ +A F + N + W +L +Y + + +IF + + ++++ S+L
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C LG+L++G QIHS + K + + +V LI++YAK KLD A + D+
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 557
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ +I GY Q +A+ F +M G+ EV + + A A ++ G+Q+H+
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA 617
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
GFSS N ++ YS+C +EES F++ + D ++WNAL++G S + EA+
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+ M EG N +T+ + + +S+ ++ GKQ H I K G+DS + +AL+ MY
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMY 737
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG ++DA K F +S+KN VSWN ++ Y++HG G EAL+ + M + ++PN T +
Sbjct: 738 AKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLV 797
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVLSAC HIGLV++G YF SM ++G+SP+ +H VV + G RA EFI+ PI
Sbjct: 798 GVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI 857
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+P+ +VWR LLS C HK++ +G +AA +L +PED++ +++LSN+YA + WD
Sbjct: 858 KPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLT 917
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
R+ MKEK +KK+ G SW E++N +H F ++HE L+ + GYV D
Sbjct: 918 RQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 976
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 156/532 (29%), Positives = 269/532 (50%), Gaps = 7/532 (1%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A K+FDEMPER + +W+ +I + + F MV + PN T+ G + AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-- 196
Query: 89 RGDARS---GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
RG + + ++IH R+ GL ++ V N LI++Y + G + A+ VFD ++ SW
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
V+++S + +++F G+ + ++ +SVL AC + +L++G Q+H LV K
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
D +V L++LY L A +FSN+ D ++ LI G +Q G +A++L
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F +M GL P T + ++ A + G+QLH+ K+GF+S + +L+ Y+K
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C +E +L F E + +VV WN ++ + + + + M E PN YTY +I
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L + +E G+Q H I+K F N + S L+DMYAK G+L+ A + + K++
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
VSW TM+ GY Q+ +AL + M + I+ ++ +SAC + ++EG ++
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHA 615
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G S + ++V L++ G+ +Y + + N + W L+SG
Sbjct: 616 QACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSG 666
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/562 (23%), Positives = 274/562 (48%), Gaps = 4/562 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + + N L+ +Y + ++ A+++FD + ++ SW A+ISG S+ A
Sbjct: 213 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEA 272
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M + P Y + +SAC G+++HG + + G +++V N L+++
Sbjct: 273 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 332
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G L SA+ +F +R+++++ +L++ QCG +++F G+ +
Sbjct: 333 YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 392
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS++ AC+ G L G Q+H+ K + + L+NLYAKC ++ A F ++
Sbjct: 393 ASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV 452
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+ ++ Y L + +F +M ++P++ T+ +L + + G Q+
Sbjct: 453 ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI 512
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS IIK F +V + ++D Y+K L+ + DVVSW +IAG+
Sbjct: 513 HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFD 572
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A+ + ML G + +N ++ + + A++ G+Q H GF S++ +AL
Sbjct: 573 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNAL 632
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V +Y++CG++ ++ F+ + + ++WN ++ G+ Q G EAL ++ M I N+
Sbjct: 633 VTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN 692
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFI 539
TF + A +++G +++I G + +++ ++A C + +F+
Sbjct: 693 FTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFL 751
Query: 540 KSSPIEPNKVVWRCLLSGCKTH 561
+ S N+V W +++ H
Sbjct: 752 EVST--KNEVSWNAIINAYSKH 771
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 225/443 (50%), Gaps = 10/443 (2%)
Query: 72 LEPNYYTYVGAVSAC-ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
+ PN+ T + C + G G+++H ++ + GL+ N +S L + Y G L A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 131 QFVFDASLERNSISW---VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
VFD ER +W + L+S GE V GL + ++S V +E + + VL AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGE-VFGLFVRMVSE--NVTPNEGTFSGVLEAC 196
Query: 188 AVLG-NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
V QIH+ + L V LI+LY++ +DLA RVF ++L D ++W
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
A+I G ++ EAI LF M+ G+MP+ FS VL A ++ G QLH L++K
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE-AIE 365
+GFSS T+V N ++ Y L + F M + D V++N LI G L+ C YGE A+E
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING-LSQCGYGEKAME 375
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L K M +G P+ T ++++ S + G+Q H K GF SN I AL+++YA
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KC + A F +N+V WN MLV Y R + I+ MQ +I PN T+
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 495
Query: 486 VLSACVHIGLVEEGWHYFNSMIR 508
+L C+ +G +E G + +I+
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIK 518
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 176/355 (49%), Gaps = 2/355 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + F N + L+ MY K +++ A + ++V+SW+ +I+G++Q + A
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M+ + + AVSACA + G++IH + SG + N L+ +
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG + + F+ + ++I+W +L+S + Q G + L++F+ + G+ + F+
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S + A + N+K G Q+H+++ K + + V LI++YAKC + A + F +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG-RQ 299
+ +W+A+I Y++ G EA+D F +M S + P+ VT VL A + + G
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
S+ + G S V+D ++ LL + + EM + D + W L++
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 188/377 (49%), Gaps = 13/377 (3%)
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
G G+L G ++HS + K L+ + ++ L + Y L A +VF + +
Sbjct: 93 GCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIF 152
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL-----GAFA-DVKETIGGR 298
W+ +I A E LFV+M S + P+E TFS VL G+ A DV E
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE----- 207
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+ I+ G T V N ++D YS+ ++ + + FD + D SW A+I+G +
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EAI L DM G P Y +S++L+ I ++E G+Q H ++K GF S+ + +
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALV +Y G L A +F ++S ++ V++NT++ G +Q G G +A+E++ M + ++P
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ NT ++ AC G + G ++ G + ++++L+A A ++
Sbjct: 388 DSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 539 IKSSPIEPNKVVWRCLL 555
+ +E N V+W +L
Sbjct: 447 FLETEVE-NVVLWNVML 462
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 4/287 (1%)
Query: 273 GLMPSEVTFSYVL-GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
G+ P+ T ++L G GR+LHS I+K+G S ++ + DFY L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI-SS 390
+ K FDEM E + +WN +I + GE L M+ E PN T+S +L
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
A + +Q H I+ G + V+ + L+D+Y++ G ++ AR+VFD L K+ SW
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
M+ G +++ EA+ ++ M I P F VLSAC I +E G + ++
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG-EQLHGLVLKL 317
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G S ++V L+ G A E I S+ + + V + L++G
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISA-EHIFSNMSQRDAVTYNTLING 363
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/659 (33%), Positives = 366/659 (55%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N L+ +Y + A+ +F M +R+ ++++ LI+G SQ G E A+ F
Sbjct: 278 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 337
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M LEP+ T V AC++ G G+++H + G N+ + L+N+Y KC
Sbjct: 338 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 397
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ +A F + N + W +L +Y + + +IF + + ++++ S+L
Sbjct: 398 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 457
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C LG+L++G QIHS + K + + +V LI++YAK KLD A + D+
Sbjct: 458 KTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 517
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ +I GY Q +A+ F +M G+ EV + + A A ++ G+Q+H+
Sbjct: 518 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA 577
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
GFSS N ++ YS+C +EES F++ + D ++WNAL++G S + EA+
Sbjct: 578 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 637
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+ M EG N +T+ + + +S+ ++ GKQ H I K G+DS + +AL+ MY
Sbjct: 638 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMY 697
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG ++DA K F +S+KN VSWN ++ Y++HG G EAL+ + M + ++PN T +
Sbjct: 698 AKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLV 757
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVLSAC HIGLV++G YF SM ++G+SP+ +H VV + G RA EFI+ PI
Sbjct: 758 GVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI 817
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+P+ +VWR LLS C HK++ +G +AA +L +PED++ +++LSN+YA + WD
Sbjct: 818 KPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLT 877
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
R+ MKEK +KK+ G SW E++N +H F ++HE L+ + GYV D
Sbjct: 878 RQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 936
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/532 (29%), Positives = 269/532 (50%), Gaps = 7/532 (1%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A K+FDEMPER + +W+ +I + + F MV + PN T+ G + AC
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-- 156
Query: 89 RGDARS---GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
RG + + ++IH R+ GL ++ V N LI++Y + G + A+ VFD ++ SW
Sbjct: 157 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 216
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
V+++S + +++F G+ + ++ +SVL AC + +L++G Q+H LV K
Sbjct: 217 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 276
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
D +V L++LY L A +FSN+ D ++ LI G +Q G +A++L
Sbjct: 277 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 336
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F +M GL P T + ++ A + G+QLH+ K+GF+S + +L+ Y+K
Sbjct: 337 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 396
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C +E +L F E + +VV WN ++ + + + + M E PN YTY +I
Sbjct: 397 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 456
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L + +E G+Q H I+K F N + S L+DMYAK G+L+ A + + K++
Sbjct: 457 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 516
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
VSW TM+ GY Q+ +AL + M + I+ ++ +SAC + ++EG ++
Sbjct: 517 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHA 575
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G S + ++V L++ G+ +Y + + N + W L+SG
Sbjct: 576 QACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSG 626
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/562 (23%), Positives = 274/562 (48%), Gaps = 4/562 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + + N L+ +Y + ++ A+++FD + ++ SW A+ISG S+ A
Sbjct: 173 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEA 232
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M + P Y + +SAC G+++HG + + G +++V N L+++
Sbjct: 233 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 292
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G L SA+ +F +R+++++ +L++ QCG +++F G+ +
Sbjct: 293 YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 352
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS++ AC+ G L G Q+H+ K + + L+NLYAKC ++ A F ++
Sbjct: 353 ASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV 412
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+ ++ Y L + +F +M ++P++ T+ +L + + G Q+
Sbjct: 413 ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI 472
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS IIK F +V + ++D Y+K L+ + DVVSW +IAG+
Sbjct: 473 HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFD 532
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A+ + ML G + +N ++ + + A++ G+Q H GF S++ +AL
Sbjct: 533 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNAL 592
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V +Y++CG++ ++ F+ + + ++WN ++ G+ Q G EAL ++ M I N+
Sbjct: 593 VTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN 652
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFI 539
TF + A +++G +++I G + +++ ++A C + +F+
Sbjct: 653 FTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFL 711
Query: 540 KSSPIEPNKVVWRCLLSGCKTH 561
+ S N+V W +++ H
Sbjct: 712 EVST--KNEVSWNAIINAYSKH 731
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 225/443 (50%), Gaps = 10/443 (2%)
Query: 72 LEPNYYTYVGAVSAC-ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
+ PN+ T + C + G G+++H ++ + GL+ N +S L + Y G L A
Sbjct: 40 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 99
Query: 131 QFVFDASLERNSISW---VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
VFD ER +W + L+S GE V GL + ++S V +E + + VL AC
Sbjct: 100 FKVFDEMPERTIFTWNKMIKELASRNLIGE-VFGLFVRMVSEN--VTPNEGTFSGVLEAC 156
Query: 188 AVLG-NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
V QIH+ + L V LI+LY++ +DLA RVF ++L D ++W
Sbjct: 157 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 216
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
A+I G ++ EAI LF M+ G+MP+ FS VL A ++ G QLH L++K
Sbjct: 217 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 276
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE-AIE 365
+GFSS T+V N ++ Y L + F M + D V++N LI G L+ C YGE A+E
Sbjct: 277 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING-LSQCGYGEKAME 335
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L K M +G P+ T ++++ S + G+Q H K GF SN I AL+++YA
Sbjct: 336 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 395
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KC + A F +N+V WN MLV Y R + I+ MQ +I PN T+
Sbjct: 396 KCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 455
Query: 486 VLSACVHIGLVEEGWHYFNSMIR 508
+L C+ +G +E G + +I+
Sbjct: 456 ILKTCIRLGDLELGEQIHSQIIK 478
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 176/355 (49%), Gaps = 2/355 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + F N + L+ MY K +++ A + ++V+SW+ +I+G++Q + A
Sbjct: 476 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 535
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M+ + + AVSACA + G++IH + SG + N L+ +
Sbjct: 536 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 595
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG + + F+ + ++I+W +L+S + Q G + L++F+ + G+ + F+
Sbjct: 596 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 655
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S + A + N+K G Q+H+++ K + + V LI++YAKC + A + F +
Sbjct: 656 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 715
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG-RQ 299
+ +W+A+I Y++ G EA+D F +M S + P+ VT VL A + + G
Sbjct: 716 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 775
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
S+ + G S V+D ++ LL + + EM + D + W L++
Sbjct: 776 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 830
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 188/377 (49%), Gaps = 13/377 (3%)
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
G G+L G ++HS + K L+ + ++ L + Y L A +VF + +
Sbjct: 53 GCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIF 112
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL-----GAFA-DVKETIGGR 298
W+ +I A E LFV+M S + P+E TFS VL G+ A DV E
Sbjct: 113 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE----- 167
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+ I+ G T V N ++D YS+ ++ + + FD + D SW A+I+G +
Sbjct: 168 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 227
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EAI L DM G P Y +S++L+ I ++E G+Q H ++K GF S+ + +
Sbjct: 228 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 287
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALV +Y G L A +F ++S ++ V++NT++ G +Q G G +A+E++ M + ++P
Sbjct: 288 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 347
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ NT ++ AC G + G ++ G + ++++L+A A ++
Sbjct: 348 DSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 406
Query: 539 IKSSPIEPNKVVWRCLL 555
+ +E N V+W +L
Sbjct: 407 FLETEVE-NVVLWNVML 422
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 4/287 (1%)
Query: 273 GLMPSEVTFSYVLGAFADVKETIG-GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
G+ P+ T ++L ++ GR+LHS I+K+G S ++ + DFY L
Sbjct: 39 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 98
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI-SS 390
+ K FDEM E + +WN +I + GE L M+ E PN T+S +L
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
A + +Q H I+ G + V+ + L+D+Y++ G ++ AR+VFD L K+ SW
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 218
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
M+ G +++ EA+ ++ M I P F VLSAC I +E G + ++
Sbjct: 219 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG-EQLHGLVLKL 277
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G S ++V L+ G A E I S+ + + V + L++G
Sbjct: 278 GFSSDTYVCNALVSLYFHLGNLISA-EHIFSNMSQRDAVTYNTLING 323
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/656 (35%), Positives = 374/656 (57%), Gaps = 30/656 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V+ + LL MY K R ++ ++F +PE+N +SWSA+I+G Q + +A
Sbjct: 164 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 223
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F+ M + Y + +CA+ + R G ++H +S + V ++M
Sbjct: 224 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 283
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK---SGVAISE 177
Y KC + AQ +FD S N S+ ++++ Y Q HG K LL + SG+ E
Sbjct: 284 YAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQ---EEHGFKALLLFHRLMSSGLGFDE 340
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
S + V ACA++ L G+QI+ L K +L D VA I++Y KC+ L A RVF
Sbjct: 341 ISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 400
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG- 296
++ D +W+A+I + Q GK E + LFV M S + P E TF VL A ++G
Sbjct: 401 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG--GSLGY 458
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK-------------TFDEMDE-H 342
G ++HS I+K G +S + V +++D YSKC ++EE+ K T +E+++ H
Sbjct: 459 GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMH 518
Query: 343 D------VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
+ VSWN++I+G++ +A L M+ G P+ +TY+ +L+ +++ +
Sbjct: 519 NKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAG 578
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
GKQ H ++K S+V I S LVDMY+KCG L+D+R +F+ ++ V+WN M+ GYA
Sbjct: 579 LGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYA 638
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
HG G EA++++ M IKPN TFI +L AC H+GL+++G YF M RD+G+ P++
Sbjct: 639 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQL 698
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV-LGRYAAEKIL 575
H +++V + G+ +RA E I+ P E + V+WR LL C H++ V + A +L
Sbjct: 699 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALL 758
Query: 576 STDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
DP+D+SA+ +LSNVYA+A MW++ + +R+ M+ LKK+ GCSW EL++++H F
Sbjct: 759 RLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVF 814
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/506 (30%), Positives = 258/506 (50%), Gaps = 21/506 (4%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V+++N ++ Y K + + A F+ MP R+V+SW++++SG+ Q G ++ F M
Sbjct: 71 DVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMG 130
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
E + T+ + C+ D G +IHG + R G + + ++ L++MY K
Sbjct: 131 RAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFV 190
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+ VF E+NS+SW ++++ Q LK F +K +S+ ASVL +CA
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L L++G Q+H+ K D V +++YAKC+ + A +F + + +++A
Sbjct: 251 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNA 310
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I GY+Q +A+ LF ++ SSGL E++ S V A A VK G Q++ L IK
Sbjct: 311 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSS 370
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
S VAN +D Y KC+ L E+ + FDEM D VSWNA+IA H + E + L
Sbjct: 371 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 430
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
ML P+ +T+ ++L + ++ +G + H IVK G SN +G +L+DMY+KCG
Sbjct: 431 SMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCG 489
Query: 429 RLNDARKV----------------FDHLSSKNL----VSWNTMLVGYAQHGLGREALEIY 468
+ +A K+ + + +K L VSWN+++ GY +A ++
Sbjct: 490 MIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLF 549
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIG 494
+ M E I P+ T+ VL C ++
Sbjct: 550 TRMMEMGITPDKFTYATVLDTCANLA 575
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 149/619 (24%), Positives = 267/619 (43%), Gaps = 96/619 (15%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCL---------------------------- 117
CA +G GK+ H M SG + V NCL
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 118 ---INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
IN Y K + A F F+ R+ +SW S+LS Y Q GE + +++F+ ++G
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ A +L C+ L + +GMQIH +V + + D A L+++YAK ++ + RV
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F I + +WSA+I G Q A+ F +M S+ ++ VL + A + E
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G QLH+ +K F++ V LD Y+KC+ ++++ FD+ + + S+NA+I G+
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGY 315
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
H +A+ L ++ G + + S + + + + G Q + +K +V
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDV 375
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +A +DMY KC L +A +VFD + ++ VSWN ++ + Q+G G E L ++ M +
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435
Query: 475 KIKPNDNTFIGVLSACV----------------------------------HIGLVEEGW 500
+I+P++ TF VL AC G++EE
Sbjct: 436 RIEPDEFTFGSVLKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAE 495
Query: 501 HYFNSMIRDHGISPRMDHIA---------------SVVHLFACRGQTRRA---YEFIKSS 542
+ + +S M+ + S++ + + Q+ A + +
Sbjct: 496 KIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 555
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
I P+K + +L C LG+ +++ + + S+VY + + D +
Sbjct: 556 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--------LQSDVYISSTLVDMYS 607
Query: 603 KV-----RKIMKEKSLKKD 616
K ++M EKSL++D
Sbjct: 608 KCGDLHDSRLMFEKSLRRD 626
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/664 (34%), Positives = 373/664 (56%), Gaps = 2/664 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF +V+T + LL MY K R++D+ +F E+PE+N +SWSA+I+G Q
Sbjct: 207 VVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEG 266
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ M + + Y +CA+ R GKE+H +S + V ++M
Sbjct: 267 LELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDM 326
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG ++ AQ V + + + S+ +++ Y + LK F L K+G+ E +
Sbjct: 327 YAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITL 386
Query: 181 ASVLGACA-VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ L ACA + G+L+ G Q+H L K + VA ++++Y KC+ L AS +F ++
Sbjct: 387 SGALNACASIRGDLE-GRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMME 445
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D +W+A+I Q G E + F M S + P + T+ VL A A + G +
Sbjct: 446 RRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGME 505
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ IIK G +FV ++D Y KC ++E++ K D ++ +VSWNA+I+G
Sbjct: 506 IHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQ 565
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A + ML G P+ +TY+ +L+ +++ + GKQ H I+K S+V I S
Sbjct: 566 SEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICST 625
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMY+KCG + D++ +F+ +++ V+WN ML GYA HGLG EAL+++ MQ +KPN
Sbjct: 626 LVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPN 685
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ VL AC H+GLV++G HYF+ M+ ++G+ P+ +H + +V + G+ A +
Sbjct: 686 HATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLV 745
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ P E + V+WR LLS CK H ++ + A +L DP+D+SA ++LSN+YA+A MW
Sbjct: 746 QKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWG 805
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+++RK+M+ LKK+ GCSW EL++++H F + +++E + L + G
Sbjct: 806 NVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVG 865
Query: 660 YVPD 663
Y+PD
Sbjct: 866 YIPD 869
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 165/553 (29%), Positives = 290/553 (52%), Gaps = 2/553 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V++YN ++ Y ++ A+K F EMPER+V+SW+++ISGF Q G +++ F M
Sbjct: 114 DVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMG 173
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
C + + + + AC + + G ++HG + + G + + + L+ MY KC L
Sbjct: 174 RCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLD 233
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+ VF E+N +SW ++++ Q +V GL++F + GV +S+ AS+ +CA
Sbjct: 234 DSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCA 293
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L L++G ++HS K A D V +++YAKC ++ A +V S++ L +++A
Sbjct: 294 ALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNA 353
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I GYA+ + +A+ F + +GL E+T S L A A ++ + GRQ+H L +K
Sbjct: 354 IIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSI 413
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
S VAN +LD Y KC+ L E+ FD M+ D VSWNA+IA + + E +
Sbjct: 414 SMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFA 473
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M+ P+ +TY ++L + A+ G + H I+K G + +G+ALVDMY KCG
Sbjct: 474 SMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCG 533
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ A K+ D K +VSWN ++ G++ +A + +S M E + P++ T+ VL
Sbjct: 534 MIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLD 593
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
C ++ V G +I+ + + +++V +++ G + + + +P +
Sbjct: 594 TCANLATVGLGKQIHAQIIKQE-LQSDVYICSTLVDMYSKCGNMQDSQLMFEKAP-NRDF 651
Query: 549 VVWRCLLSGCKTH 561
V W +L G H
Sbjct: 652 VTWNAMLCGYAHH 664
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 151/535 (28%), Positives = 247/535 (46%), Gaps = 35/535 (6%)
Query: 56 MPEVALNYFRLMVCCVLEP--NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV 113
+P + N F + +P T+ C+ + GK+ H RM G E + V
Sbjct: 27 IPPIPTNNFSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFV 86
Query: 114 SNCLINMYGKCGLLSSAQFVFDASL-------------------------------ERNS 142
SNCL+ MY KC L A VFD ER+
Sbjct: 87 SNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDV 146
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
+SW S++S + Q GE + +FL + GV S A VL AC L +G+Q+H L
Sbjct: 147 VSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGL 206
Query: 203 VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEA 262
V K + D L+ +YAKC++LD + VFS + + +WSA+I G Q + E
Sbjct: 207 VVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEG 266
Query: 263 IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
++LF +M G+ S+ ++ + + A + G++LHS +K F S V LD
Sbjct: 267 LELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDM 326
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
Y+KC + ++ K M + + S+NA+I G+ S +A++ + +L G + T
Sbjct: 327 YAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITL 386
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
S LN + I G+Q H VK SN+ + +A++DMY KC L +A +FD +
Sbjct: 387 SGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMER 446
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
++ VSWN ++ Q+G E L ++ M ++++P+D T+ VL AC + G
Sbjct: 447 RDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEI 506
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+I+ G+ A++V ++ G +A + I + V W ++SG
Sbjct: 507 HTRIIKS-GMGFDSFVGAALVDMYCKCGMIEKA-DKIHDRTEQKTMVSWNAIISG 559
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/662 (33%), Positives = 368/662 (55%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF +V+T L+ MY +++ A +F EMPERN + WSA+I+G+ + L
Sbjct: 197 IQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGL 256
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+++M+ + + T+ A +CA G ++H ++ ++ V ++MY
Sbjct: 257 KLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMY 316
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + A+ VF+ S +L+ Y + + + L+IF +KS + E S +
Sbjct: 317 AKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLS 376
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
L AC+ + G+Q+H L KC L+F+ VA ++++YAKC L A +F ++++
Sbjct: 377 GALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIK 436
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +W+A+I + Q E + LFV M S + P + TF V+ A A K G ++H
Sbjct: 437 DAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVH 496
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+IK G FV + ++D Y KC +L E+ K + ++E VSWN++I+G +
Sbjct: 497 GRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGE 556
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
A+ ML G P+ +TY+ +L+I +++ +E GKQ H I+K S+V I S +V
Sbjct: 557 NALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIV 616
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY+KCG + D+R +F+ ++ V+W+ M+ YA HGLG +A++++ MQ +KPN
Sbjct: 617 DMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHT 676
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
FI VL AC H+G V++G HYF M +G+ P+M+H + +V L GQ A E I+S
Sbjct: 677 IFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIES 736
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P E + V+WR LL C+ ++ + AA +L DP+D+SA+++LSNVYA A MW E
Sbjct: 737 MPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEV 796
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
AK+R MK LKK+ GCSW ++++++H F A + ++++ + L + GYV
Sbjct: 797 AKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYV 856
Query: 662 PD 663
P+
Sbjct: 857 PE 858
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 166/554 (29%), Positives = 291/554 (52%), Gaps = 4/554 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+VI++N ++ Y + AQ LFD MPER+V+SW++++S + Q G ++ F M
Sbjct: 103 DVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMR 162
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
++ +Y T+ + AC D G ++H + G + + L++MY C L
Sbjct: 163 LLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLD 222
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A +F ERNS+ W ++++ Y + GLK++ + G+ +S+ + AS +CA
Sbjct: 223 HAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCA 282
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L ++G Q+H+ K +D V +++YAKC+++ A +VF+ P + +A
Sbjct: 283 GLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNA 342
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
LI GYA+ + EA+++F + S L E++ S L A + +K + G QLH L +K G
Sbjct: 343 LIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCG 402
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
VANT+LD Y+KC L E+ FD+M+ D VSWNA+IA H + H E + L
Sbjct: 403 LDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFV 462
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
ML P+ YT+ +++ + A+ +G + H ++K G + +GSA++DMY KCG
Sbjct: 463 SMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCG 522
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
L +A K+ + L + VSWN+++ G++ G AL +S M + + P++ T+ VL
Sbjct: 523 MLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLD 582
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS-VVHLFACRGQTRRAYEFIKSSPIEPN 547
C ++ VE G +++ S +IAS +V +++ G + + + +P + +
Sbjct: 583 ICANLATVELGKQIHGQILKLQLHSDV--YIASTIVDMYSKCGNMQDSRIMFEKAP-KRD 639
Query: 548 KVVWRCLLSGCKTH 561
V W ++ H
Sbjct: 640 YVTWSAMICAYAYH 653
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 232/516 (44%), Gaps = 33/516 (6%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC------------- 124
T+ C++ GK+ H ++ +G VSNCL+ Y KC
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 125 ------------------GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
G + AQF+FD+ ER+ +SW S+LS Y Q G H ++IF
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
R + + A VL AC + + +G+Q+H L + + D L+++Y+ C+
Sbjct: 160 KMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCK 219
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
KLD A +F + + WSA+I GY + + E + L+ M G+ S+ TF+
Sbjct: 220 KLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFR 279
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
+ A + G QLH+ +K F V LD Y+KC+ + ++ K F+ S
Sbjct: 280 SCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQS 339
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
NALI G+ EA+E+ + + + + S L S I G Q H V
Sbjct: 340 HNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAV 399
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
K G D N+ + + ++DMYAKCG L +A +FD + K+ VSWN ++ + Q+ E L
Sbjct: 400 KCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLA 459
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
++ M + ++P+D TF V+ AC + G +I+ G+ ++++ ++
Sbjct: 460 LFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKS-GMGLDWFVGSAIIDMY 518
Query: 527 ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
G A E I E V W ++SG + K
Sbjct: 519 CKCGMLVEA-EKIHERLEERTTVSWNSIISGFSSEK 553
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 128/261 (49%), Gaps = 32/261 (12%)
Query: 271 SSGLMPSE-VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
S+ + P++ +TFS++ +++K G+Q H+ I GF FV+N +L FY KC L
Sbjct: 30 SNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNL 89
Query: 330 EESLKTFDEMDEHDVVSWNALIAGH--------------------------LASCH---- 359
+ FD+M + DV+SWN +I G+ + SC+
Sbjct: 90 NYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNG 149
Query: 360 -YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ ++IE+ M + T++ +L + I G Q HC ++ GFDS+VV G+
Sbjct: 150 FHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGT 209
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALVDMY+ C +L+ A +F + +N V W+ ++ GY ++ E L++Y +M + +
Sbjct: 210 ALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGV 269
Query: 479 NDNTFIGVLSACVHIGLVEEG 499
+ TF +C + E G
Sbjct: 270 SQATFASAFRSCAGLSAFELG 290
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 110/197 (55%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + + ++ MY K + +A+K+ + + ER +SW+++ISGFS E A
Sbjct: 499 VIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENA 558
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+YF M+ + P+ +TY + CA+ GK+IHG++ + L + ++++ +++M
Sbjct: 559 LSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDM 618
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + ++ +F+ + +R+ ++W +++ +Y G +K+F + V +
Sbjct: 619 YSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIF 678
Query: 181 ASVLGACAVLGNLKVGM 197
SVL ACA +G + G+
Sbjct: 679 ISVLRACAHMGFVDKGL 695
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/647 (33%), Positives = 374/647 (57%), Gaps = 7/647 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N L+ +Y++ A ++F +M + ++++ LISG +Q G + AL F
Sbjct: 173 GFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIF 232
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M L P+ T ++AC++ GD R GK++H + ++G+ L+ + L+++Y K
Sbjct: 233 DEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKS 292
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A +FD+ N + W +L +Y Q + IF +GV ++F+ +L
Sbjct: 293 GDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCML 352
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C G + +G QIHSL K + D +V+ LI++Y+K LD A R+ I+ D+
Sbjct: 353 RTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVV 412
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+++I GY Q EA++ F +M + G+ P + + + A A +K G Q+H+ +
Sbjct: 413 SWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARV 472
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
G+S+ + N ++ Y++C + +E+ +F+ ++ + ++WN LI+G S Y EA+
Sbjct: 473 YVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEAL 532
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ M G N++T+ + ++ S+++ I+ GKQ H ++K G+ S I +AL+ +Y
Sbjct: 533 KVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLY 592
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG + DA+ F ++ +N VSWNT++ +QHG G EAL+++ M++ +KP+D TF+
Sbjct: 593 GKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFV 652
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVL+AC H+GLVEEG YF SM +HGI PR DH A VV + GQ RA F++ PI
Sbjct: 653 GVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPI 712
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+ +VWR LLS CK HK+L +G +AA+ +L +P D++++++LSN YA W ++
Sbjct: 713 PADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQI 772
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
RKIMK++ ++K+ G SW E++N +H F F G LH + +Q+
Sbjct: 773 RKIMKDRGVRKEPGRSWIEVKNVVHAF-------FVGDRLHPLADQI 812
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/561 (28%), Positives = 300/561 (53%), Gaps = 4/561 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G I N L+ +Y K + A+++F+E+ R+ +SW A++SG++Q G+ E A+
Sbjct: 69 IICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAV 128
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+R M + P Y +SAC + G+ IH ++Y+ G + V N LI++Y
Sbjct: 129 RLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLY 188
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+C A VF L +S+++ +L+S + QCG L IF + SG++ + A
Sbjct: 189 LRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIA 248
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L AC+ +G+L+ G Q+HS + K + D + L++LY K ++ A ++F +
Sbjct: 249 SLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRT 308
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+ ++ Y Q+ ++ D+F +M ++G+ P++ T+ +L E G Q+H
Sbjct: 309 NVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIH 368
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
SL IK GF S +V+ ++D YSK L+++ + D ++E DVVSW ++IAG++
Sbjct: 369 SLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCK 428
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA+E K+M G P+ ++ ++ + I A+ G Q H + G+ ++V I + LV
Sbjct: 429 EALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLV 488
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
+YA+CG +A F+ + K ++WN ++ G+AQ GL EAL+++ M + K N
Sbjct: 489 YLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVF 548
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA-YEFIK 540
TF+ +SA ++ +++G +I+ G + + +++ L+ G A +F +
Sbjct: 549 TFVSSISASANLADIKQGKQIHARVIKT-GYTSETEISNALISLYGKCGSIEDAKMDFFE 607
Query: 541 SSPIEPNKVVWRCLLSGCKTH 561
+ + N+V W +++ C H
Sbjct: 608 MT--KRNEVSWNTIITCCSQH 626
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 168/530 (31%), Positives = 271/530 (51%), Gaps = 17/530 (3%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVS-ACASRGDARS 94
M R S++ ++GF PE L F + Y +GAV ACA R S
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLF------AAKCRQYMVLGAVDFACALRACRGS 54
Query: 95 GK------EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
G+ EIH + GL + N LI++Y K G + A+ VF+ R+++SWV++
Sbjct: 55 GRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAV 114
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
LS Y Q G ++++ +SGV + + +S+L AC ++G IH V+K
Sbjct: 115 LSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGF 174
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+ FV LI+LY +C LA RVF ++ D ++ LI G+AQ G A+ +F +
Sbjct: 175 FSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDE 234
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M SGL P VT + +L A + V + G+QLHS ++K G S + ++LD Y K
Sbjct: 235 MQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGD 294
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+EE+L+ FD D +VV WN ++ + ++ ++ ML G PN +TY +L
Sbjct: 295 IEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRT 354
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ I G+Q H +K GF S++ + L+DMY+K G L+ A+++ D + K++VSW
Sbjct: 355 CTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSW 414
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+M+ GY QH +EALE + MQ I P++ +SAC I V +G ++ +
Sbjct: 415 TSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQ-IHARVY 473
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK-VVWRCLLSG 557
G S + +V+L+A G ++ A+ ++ IE + + W L+SG
Sbjct: 474 VSGYSADVSIWNGLVYLYARCGISKEAFSSFEA--IEHKEGITWNGLISG 521
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/538 (26%), Positives = 255/538 (47%), Gaps = 20/538 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + I LL +YVK I +A ++FD NV+ W+ ++ + QI +
Sbjct: 270 LLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKS 329
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M+ + PN +TY + C G+ G++IH ++G + + +VS LI+M
Sbjct: 330 FDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDM 389
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L AQ + D E++ +SW S+++ Y Q L+ F + G+
Sbjct: 390 YSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGL 449
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS + ACA + + G QIH+ V+ D + GL+ LYA+C A F I+
Sbjct: 450 ASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEH 509
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ W+ LI G+AQ G EA+ +F+KM +G + TF + A A++ + G+Q+
Sbjct: 510 KEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQI 569
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK G++S T ++N ++ Y KC +E++ F EM + + VSWN +I
Sbjct: 570 HARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRG 629
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-----GFDSNVV 415
EA++L M +G P+ T+ +L S + +E G C K G
Sbjct: 630 LEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEG----LCYFKSMSNEHGIHPRPD 685
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +VD+ + G+L+ A++ + + + + W T+L H + LEI ++
Sbjct: 686 HYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVH----KNLEIGEFAAKH 741
Query: 475 --KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH----IASVVHLF 526
+++P+D+ +LS + +++D G+ + +VVH F
Sbjct: 742 LLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAF 799
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/656 (35%), Positives = 374/656 (57%), Gaps = 30/656 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V+ + LL MY K R ++ ++F +PE+N +SWSA+I+G Q + +A
Sbjct: 206 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 265
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F+ M + Y + +CA+ + R G ++H +S + V ++M
Sbjct: 266 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 325
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK---SGVAISE 177
Y KC + AQ +FD S N S+ ++++ Y Q HG K LL + SG+ E
Sbjct: 326 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ---EEHGFKALLLFHRLMSSGLGFDE 382
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
S + V ACA++ L G+QI+ L K +L D VA I++Y KC+ L A RVF
Sbjct: 383 ISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 442
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG- 296
++ D +W+A+I + Q GK E + LFV M S + P E TF +L A ++G
Sbjct: 443 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG--GSLGY 500
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK-------------TFDEMDE-H 342
G ++HS I+K G +S + V +++D YSKC ++EE+ K T +E+++ H
Sbjct: 501 GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMH 560
Query: 343 D------VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
+ VSWN++I+G++ +A L M+ G P+ +TY+ +L+ +++ +
Sbjct: 561 NKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAG 620
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
GKQ H ++K S+V I S LVDMY+KCG L+D+R +F+ ++ V+WN M+ GYA
Sbjct: 621 LGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYA 680
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
HG G EA++++ M IKPN TFI +L AC H+GL+++G YF M RD+G+ P++
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQL 740
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV-LGRYAAEKIL 575
H +++V + G+ +RA E I+ P E + V+WR LL C H++ V + A +L
Sbjct: 741 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALL 800
Query: 576 STDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
DP+D+SA+ +LSNVYA+A MW++ + +R+ M+ LKK+ GCSW EL++++H F
Sbjct: 801 RLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVF 856
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/545 (29%), Positives = 262/545 (48%), Gaps = 52/545 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI SGF P N LL +Y A +FD+MP R+V+SW+ +I+G+S+ A
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKA 133
Query: 61 LNYFRLMVCCV-------------------------------LEPNYYTYVGAVSACASR 89
++F +M +E + T+ + C+
Sbjct: 134 NSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFL 193
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
D G +IHG + R G + + ++ L++MY K + VF E+NS+SW +++
Sbjct: 194 EDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAII 253
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ Q LK F +K +S+ ASVL +CA L L++G Q+H+ K
Sbjct: 254 AGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFA 313
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
D V +++YAKC+ + A +F N + + +++A+I GY+Q +A+ LF ++
Sbjct: 314 ADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRL 373
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
SSGL E++ S V A A VK G Q++ L IK S VAN +D Y KC+ L
Sbjct: 374 MSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQAL 433
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
E+ + FDEM D VSWNA+IA H + E + L ML P+ +T+ +IL
Sbjct: 434 AEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC 493
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV------------- 436
+ ++ +G + H IVK G SN +G +L+DMY+KCG + +A K+
Sbjct: 494 TG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGT 552
Query: 437 ---FDHLSSKNL----VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ + +K L VSWN+++ GY +A +++ M E I P+ T+ VL
Sbjct: 553 MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDT 612
Query: 490 CVHIG 494
C ++
Sbjct: 613 CANLA 617
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 208/437 (47%), Gaps = 31/437 (7%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL------- 138
CA +G GK+ H M SG + V NCL+ +Y SA VFD
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 139 ------------------------ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
R+ +SW S+LS Y Q GE + +++F+ + G+
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ A +L C+ L + +GMQIH +V + + D A L+++YAK ++ + RV
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F I + +WSA+I G Q A+ F +M S+ ++ VL + A + E
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G QLH+ +K F++ V LD Y+KC+ ++++ FD + + S+NA+I G+
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
H +A+ L ++ G + + S + + + + G Q + +K +V
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +A +DMY KC L +A +VFD + ++ VSWN ++ + Q+G G E L ++ M +
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 477
Query: 475 KIKPNDNTFIGVLSACV 491
+I+P++ TF +L AC
Sbjct: 478 RIEPDEFTFGSILKACT 494
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/656 (35%), Positives = 374/656 (57%), Gaps = 30/656 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V+ + LL MY K R ++ ++F +PE+N +SWSA+I+G Q + +A
Sbjct: 164 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 223
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F+ M + Y + +CA+ + R G ++H +S + V ++M
Sbjct: 224 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 283
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK---SGVAISE 177
Y KC + AQ +FD S N S+ ++++ Y Q HG K LL + SG+ E
Sbjct: 284 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ---EEHGFKALLLFHRLMSSGLGFDE 340
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
S + V ACA++ L G+QI+ L K +L D VA I++Y KC+ L A RVF
Sbjct: 341 ISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 400
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG- 296
++ D +W+A+I + Q GK E + LFV M S + P E TF +L A ++G
Sbjct: 401 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG--GSLGY 458
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK-------------TFDEMDE-H 342
G ++HS I+K G +S + V +++D YSKC ++EE+ K T +E+++ H
Sbjct: 459 GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMH 518
Query: 343 D------VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
+ VSWN++I+G++ +A L M+ G P+ +TY+ +L+ +++ +
Sbjct: 519 NKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAG 578
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
GKQ H ++K S+V I S LVDMY+KCG L+D+R +F+ ++ V+WN M+ GYA
Sbjct: 579 LGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYA 638
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
HG G EA++++ M IKPN TFI +L AC H+GL+++G YF M RD+G+ P++
Sbjct: 639 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQL 698
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV-LGRYAAEKIL 575
H +++V + G+ +RA E I+ P E + V+WR LL C H++ V + A +L
Sbjct: 699 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALL 758
Query: 576 STDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
DP+D+SA+ +LSNVYA+A MW++ + +R+ M+ LKK+ GCSW EL++++H F
Sbjct: 759 RLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVF 814
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 156/506 (30%), Positives = 260/506 (51%), Gaps = 21/506 (4%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V+++N ++ Y K + + A F+ MP R+V+SW++++SG+ Q G ++ F M
Sbjct: 71 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 130
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+E + T+ + C+ D G +IHG + R G + + ++ L++MY K
Sbjct: 131 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 190
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+ VF E+NS+SW ++++ Q LK F +K +S+ ASVL +CA
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L L++G Q+H+ K D V +++YAKC+ + A +F N + + +++A
Sbjct: 251 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNA 310
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I GY+Q +A+ LF ++ SSGL E++ S V A A VK G Q++ L IK
Sbjct: 311 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 370
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
S VAN +D Y KC+ L E+ + FDEM D VSWNA+IA H + E + L
Sbjct: 371 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 430
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
ML P+ +T+ +IL + ++ +G + H IVK G SN +G +L+DMY+KCG
Sbjct: 431 SMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCG 489
Query: 429 RLNDARKV----------------FDHLSSKNL----VSWNTMLVGYAQHGLGREALEIY 468
+ +A K+ + + +K L VSWN+++ GY +A ++
Sbjct: 490 MIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLF 549
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIG 494
+ M E I P+ T+ VL C ++
Sbjct: 550 TRMMEMGITPDKFTYATVLDTCANLA 575
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 208/437 (47%), Gaps = 31/437 (7%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL------- 138
CA +G GK+ H M SG + V NCL+ +Y SA VFD
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 139 ------------------------ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
R+ +SW S+LS Y Q GE + +++F+ + G+
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ A +L C+ L + +GMQIH +V + + D A L+++YAK ++ + RV
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F I + +WSA+I G Q A+ F +M S+ ++ VL + A + E
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G QLH+ +K F++ V LD Y+KC+ ++++ FD + + S+NA+I G+
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 315
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
H +A+ L ++ G + + S + + + + G Q + +K +V
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 375
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +A +DMY KC L +A +VFD + ++ VSWN ++ + Q+G G E L ++ M +
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435
Query: 475 KIKPNDNTFIGVLSACV 491
+I+P++ TF +L AC
Sbjct: 436 RIEPDEFTFGSILKACT 452
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 110/234 (47%), Gaps = 31/234 (13%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI----- 351
G+Q H+ +I GF TFV N +L Y+ + FD+M DVVSWN +I
Sbjct: 25 GKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSK 84
Query: 352 --------------------------AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
+G+L + ++IE+ DM EG + T++ I
Sbjct: 85 SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAII 144
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L + S + G Q H +V+ G D++VV SAL+DMYAK R ++ +VF + KN
Sbjct: 145 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 204
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
VSW+ ++ G Q+ L AL+ + MQ+ + + + VL +C + + G
Sbjct: 205 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 258
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 43/210 (20%)
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT--- 450
A+E GKQ H ++ GF + + L+ +Y A VFD + +++VSWN
Sbjct: 21 ALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMIN 80
Query: 451 ----------------------------MLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
ML GY Q+G +++E++ M I+ + T
Sbjct: 81 GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRT 140
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F +L C + G ++ HGI R+ VV A + F++S
Sbjct: 141 FAIILKVCSFLEDTSLG-------MQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 193
Query: 543 PI-----EPNKVVWRCLLSGCKTHKDLVLG 567
+ E N V W +++GC + L L
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 223
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/624 (34%), Positives = 355/624 (56%)
Query: 40 NVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIH 99
N + W I G+ + G AL + M + P+ ++ + AC S+ D ++G+++H
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 100 GRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHV 159
+ G E + V L +MY KCG L +A+ VFD +R+ +SW ++++ Y Q G+
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203
Query: 160 HGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI 219
L +F + +G+ + + SV+ CA L L+ G QIH + +E D V GL+
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV 263
Query: 220 NLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEV 279
N+YAKC ++ A ++F + + D+ +W+A+IGGY+ + EA+ F +M G+ P+ +
Sbjct: 264 NMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSI 323
Query: 280 TFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
T VL A A + G+Q+H I+ GF S V N +++ Y+KC + + K F+ M
Sbjct: 324 TMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERM 383
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
+ +VV+WNA+I+G+ H EA+ L +M +G P+ + ++L + A+E GK
Sbjct: 384 PKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGK 443
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
Q H ++ GF+SNVV+G+ LVD+YAKCG +N A+K+F+ + +++VSW TM++ Y HG
Sbjct: 444 QIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHG 503
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
G +AL ++S MQE K + F +L+AC H GLV++G YF M D+G++P+++H
Sbjct: 504 HGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHY 563
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP 579
A +V L G A IK+ +EP+ VW LL C+ H ++ LG AA+ + DP
Sbjct: 564 ACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDP 623
Query: 580 EDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQF 639
++ +++LSN+YAEA W++ AK+RK+MKEK +KK GCS + + F
Sbjct: 624 DNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHP 683
Query: 640 QGIDLHEVMNQLSVHLFDGGYVPD 663
Q ++ ++ L + GYVP+
Sbjct: 684 QSEQIYAMLEILYEQMRKAGYVPN 707
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 144/442 (32%), Positives = 227/442 (51%), Gaps = 1/442 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +VI L MY K + +A+++FD MP+R+V+SW+A+I+G+SQ G P A
Sbjct: 146 IIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEA 205
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M ++PN T V + CA GK+IH RSG+E + V N L+NM
Sbjct: 206 LALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNM 265
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG +++A +F+ R+ SW +++ Y +H L F + G+ + +
Sbjct: 266 YAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITM 325
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL ACA L L+ G QIH + E + V L+N+YAKC ++ A ++F +
Sbjct: 326 VSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPK 385
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ AW+A+I GY+Q G EA+ LF++M + G+ P VL A A G+Q+
Sbjct: 386 KNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQI 445
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H I+ GF S V ++D Y+KC + + K F+ M E DVVSW +I + H
Sbjct: 446 HGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHG 505
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
+A+ L M G + ++ IL S ++ G Q C+ G + +
Sbjct: 506 EDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYAC 565
Query: 420 LVDMYAKCGRLNDARKVFDHLS 441
LVD+ + G L++A + ++S
Sbjct: 566 LVDLLGRAGHLDEANGIIKNMS 587
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/456 (30%), Positives = 232/456 (50%), Gaps = 13/456 (2%)
Query: 100 GRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHV 159
++ R+ ++ VS C + QF + N++ W + Y + G
Sbjct: 54 AQLRRNKVKTTREVSACA----------NQTQFT-QTDIRNNAVVWKETIIGYVKNGFWN 102
Query: 160 HGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI 219
L+++ +++G+ + SV+ AC +L+ G ++H + E D V L
Sbjct: 103 KALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALA 162
Query: 220 NLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEV 279
++Y KC L+ A +VF + D+ +W+A+I GY+Q G+ EA+ LF +M +G+ P+
Sbjct: 163 SMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSS 222
Query: 280 TFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
T V+ A + G+Q+H I+ G S V N +++ Y+KC + + K F+ M
Sbjct: 223 TLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERM 282
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
DV SWNA+I G+ + + EA+ M G PN T ++L + + A+E G+
Sbjct: 283 PIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQ 342
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
Q H ++ GF+SN V+G+ALV+MYAKCG +N A K+F+ + KN+V+WN ++ GY+QHG
Sbjct: 343 QIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHG 402
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
EAL ++ MQ IKP+ + VL AC H +E+G IR G +
Sbjct: 403 HPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRS-GFESNVVVG 461
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+V ++A G A + + P E + V W ++
Sbjct: 462 TGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMI 496
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/676 (34%), Positives = 390/676 (57%), Gaps = 7/676 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEM-PERNVISWSALISGFSQIGMPEV 59
+ S + +T N L+ +Y K + A +F M R++ISWSA++S F+ M
Sbjct: 92 LTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFR 151
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNCLI 118
AL F M+ PN Y + A AC++ G I G + ++G L+ + V LI
Sbjct: 152 ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLI 211
Query: 119 NMYGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+M+ K G L SA VF+ ERN+++W +++ Q G + +FL SG
Sbjct: 212 DMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDR 271
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE---KLDLASRV 234
F+ + V+ ACA + L +G Q+HS + L D+ V LIN+YAKC + A ++
Sbjct: 272 FTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKI 331
Query: 235 FSNIQLPDLTAWSALIGGYAQLGK-ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
F I ++ +W+A+I GY Q G EA+DLF M + ++P+ TFS L A A++
Sbjct: 332 FDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAA 391
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G Q+ + +K+GFSS VAN+++ Y++ ++++ K FD + E +++S+N +I
Sbjct: 392 LRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDA 451
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ + + EA+EL ++ +G + +T++++L+ ++ I I G+Q H ++K G N
Sbjct: 452 YAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLN 511
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ +AL+ MY++CG + A +VF+ + +N++SW +++ G+A+HG +ALE++ M E
Sbjct: 512 QSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLE 571
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
++PN+ T+I VLSAC H+GLV EGW +F SM +HG+ PRM+H A +V + G
Sbjct: 572 EGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLS 631
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A +FI S P + + +VWR L C+ H +L LG++AA+ I+ +P D +A+I+LSN+YA
Sbjct: 632 EAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYA 691
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
+ WDE + +RK MKEK L K+ GCSW E++NK+H F + + ++++ + LSV
Sbjct: 692 SISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSV 751
Query: 654 HLFDGGYVPDPIYSSH 669
+ GYVP+ + H
Sbjct: 752 KIKKLGYVPNLDFVLH 767
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 147/496 (29%), Positives = 257/496 (51%), Gaps = 11/496 (2%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ TY + C G +H ++ +S L+L+S N LI++Y KCG A +
Sbjct: 64 PDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSI 123
Query: 134 FD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
F R+ ISW +++S + L F+ ++G +E+ A+ AC+
Sbjct: 124 FRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEF 183
Query: 193 LKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLAS--RVFSNIQLPDLTAWSAL 249
+ VG I V K L+ D V GLI+++ K + DL S +VF + + W+ +
Sbjct: 184 VSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVK-GRGDLVSAFKVFEKMPERNAVTWTLM 242
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I Q G A EAIDLF+ M SG P T S V+ A A+++ + G+QLHS I+ G
Sbjct: 243 ITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGL 302
Query: 310 SSFTFVANTVLDFYSKCEL---LEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EAIE 365
+ V +++ Y+KC + + + K FD++ +H+V SW A+I G++ Y EA++
Sbjct: 303 TLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALD 362
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L + M+ PN +T+S+ L +++ A+ G+Q VK GF S + ++L+ MYA
Sbjct: 363 LFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYA 422
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
+ GR++DARK FD L KNL+S+NT++ YA++ EALE+++ +++ + + TF
Sbjct: 423 RSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFAS 482
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
+LS IG + +G +I+ G+ +++ +++ G A++ + +
Sbjct: 483 LLSGAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALISMYSRCGNIESAFQVFEDME-D 540
Query: 546 PNKVVWRCLLSGCKTH 561
N + W +++G H
Sbjct: 541 RNVISWTSIITGFAKH 556
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 7/282 (2%)
Query: 238 IQLPDLTAWSALIGGYAQL---GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
+Q P T + L G Q G+ +AI M G P T+S L +
Sbjct: 23 LQFPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSF 82
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAG 353
G +H + + + N+++ YSKC E++ F M D++SW+A+++
Sbjct: 83 DIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSC 142
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF-DS 412
+ A+ DM+ G+ PN Y ++ S + G ++K G+ S
Sbjct: 143 FANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQS 202
Query: 413 NVVIGSALVDMYAKC-GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+V +G L+DM+ K G L A KVF+ + +N V+W M+ Q G EA++++ M
Sbjct: 203 DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDM 262
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
+ +P+ T GV+SAC ++ L+ G + IR HG++
Sbjct: 263 IFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIR-HGLT 303
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+AI L+ M+ +G P+L TYS L + + G H + + + V ++L+
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 422 DMYAKCGRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+Y+KCG+ A +F + SS++L+SW+ M+ +A + +G AL + M EN PN+
Sbjct: 109 SLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFI 539
F AC V G F +I+ + + ++ +F RG A++
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVF 228
Query: 540 KSSPIEPNKVVWRCLLS 556
+ P E N V W +++
Sbjct: 229 EKMP-ERNAVTWTLMIT 244
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/676 (34%), Positives = 390/676 (57%), Gaps = 7/676 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEM-PERNVISWSALISGFSQIGMPEV 59
+ S + +T N L+ +Y K + A +F M R++ISWSA++S F+ M
Sbjct: 92 LTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFR 151
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNCLI 118
AL F M+ PN Y + A AC++ G I G + ++G L+ + V LI
Sbjct: 152 ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLI 211
Query: 119 NMYGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+M+ K G L SA VF+ ERN+++W +++ Q G + +FL SG
Sbjct: 212 DMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDR 271
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE---KLDLASRV 234
F+ + V+ ACA + L +G Q+HS + L D+ V LIN+YAKC + A ++
Sbjct: 272 FTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKI 331
Query: 235 FSNIQLPDLTAWSALIGGYAQLGK-ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
F I ++ +W+A+I GY Q G EA+DLF M + ++P+ TFS L A A++
Sbjct: 332 FDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAA 391
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G Q+ + +K+GFSS VAN+++ Y++ ++++ K FD + E +++S+N +I
Sbjct: 392 LRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDA 451
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ + + EA+EL ++ +G + +T++++L+ ++ I I G+Q H ++K G N
Sbjct: 452 YAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLN 511
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ +AL+ MY++CG + A +VF+ + +N++SW +++ G+A+HG +ALE++ M E
Sbjct: 512 QSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLE 571
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
++PN T+I VLSAC H+GLV EGW +F SM +HG+ PRM+H A +V + G
Sbjct: 572 EGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLS 631
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A +FI S P + + +VWR L C+ H +L LG++AA+ I+ +P D +A+I+LSN+YA
Sbjct: 632 EAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYA 691
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
+ WDE + +RK MKEK+L K+ GCSW E++NK+H F + + ++++ + LSV
Sbjct: 692 STSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSV 751
Query: 654 HLFDGGYVPDPIYSSH 669
+ GYVP+ + H
Sbjct: 752 KIKKLGYVPNLDFVLH 767
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 147/496 (29%), Positives = 258/496 (52%), Gaps = 11/496 (2%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ TY + C G +H ++ +S L+L+S N LI++Y KCG A +
Sbjct: 64 PDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSI 123
Query: 134 FD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
F R+ ISW +++S + L F+ ++G +E+ A+ AC+
Sbjct: 124 FQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEF 183
Query: 193 LKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLAS--RVFSNIQLPDLTAWSAL 249
+ VG I V K L+ D V GLI+++ K + DL S +VF + + W+ +
Sbjct: 184 VSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVK-GRGDLVSAFKVFEKMPERNAVTWTLM 242
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I Q G A EAIDLF++M SG P T S V+ A A+++ + G+QLHS I+ G
Sbjct: 243 ITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGL 302
Query: 310 SSFTFVANTVLDFYSKCEL---LEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EAIE 365
+ V +++ Y+KC + + + K FD++ +H+V SW A+I G++ Y EA++
Sbjct: 303 TLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALD 362
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L + M+ PN +T+S+ L +++ A+ G+Q VK GF S + ++L+ MYA
Sbjct: 363 LFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYA 422
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
+ GR++DARK FD L KNL+S+NT++ YA++ EALE+++ +++ + + TF
Sbjct: 423 RSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFAS 482
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
+LS IG + +G +I+ G+ +++ +++ G A++ + +
Sbjct: 483 LLSGAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALISMYSRCGNIESAFQVFEDME-D 540
Query: 546 PNKVVWRCLLSGCKTH 561
N + W +++G H
Sbjct: 541 RNVISWTSIITGFAKH 556
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 7/282 (2%)
Query: 238 IQLPDLTAWSALIGGYAQL---GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
+Q P T + L G Q G+ +AI M G P T+S L +
Sbjct: 23 LQFPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSF 82
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAG 353
G +H + + + N+++ YSKC E++ F M D++SW+A+++
Sbjct: 83 DIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSC 142
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF-DS 412
+ A+ DM+ G+ PN Y ++ S + G +VK G+ S
Sbjct: 143 FANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQS 202
Query: 413 NVVIGSALVDMYAKC-GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+V +G L+DM+ K G L A KVF+ + +N V+W M+ Q G EA++++ M
Sbjct: 203 DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEM 262
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
+ +P+ T GV+SAC ++ L+ G + IR HG++
Sbjct: 263 ILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIR-HGLT 303
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+AI L+ M+ +G P+L TYS L + + G H + + + V ++L+
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 422 DMYAKCGRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+Y+KCG+ A +F + SS++L+SW+ M+ +A + +G AL + M EN PN+
Sbjct: 109 SLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFI 539
F AC V G F +++ + + ++ +F RG A++
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVF 228
Query: 540 KSSPIEPNKVVWRCLLS 556
+ P E N V W +++
Sbjct: 229 EKMP-ERNAVTWTLMIT 244
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/663 (34%), Positives = 366/663 (55%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G ++ N LL YV+ + + DA KLFDEMP+ N IS+ L G+S+ A
Sbjct: 61 ILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQA 120
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L++ + E N + + + S A +H +Y+ G ++ V LI+
Sbjct: 121 LHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDA 180
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G + A+ VFD ++ +SW +++ Y + + L++F R G + F+
Sbjct: 181 YSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTI 240
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ L +C L VG +H K + D FV + L+ LYAK ++ A R+F +
Sbjct: 241 SGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPK 300
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL WS +I YAQ ++ EA+DLF++M + ++P+ TF+ VL A A G+Q+
Sbjct: 301 TDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQI 360
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS ++K G +S FV+N ++D Y+KC +E S+K F+E+ + + V+WN +I G++
Sbjct: 361 HSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDG 420
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A+ L ML P TYS++L S+ + A+E G Q H +K ++ + V+ ++L
Sbjct: 421 ERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSL 480
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMYAKCGR+NDAR FD ++ ++ VSWN M+ GY+ HG+ EAL ++ MMQ KPN
Sbjct: 481 IDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNK 540
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+GVLSAC + GL+ +G +F SM +D+ I P ++H +V L G+ A + I
Sbjct: 541 LTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIG 600
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+P+ +VWR LL C HK + LGR A+ +L +P D + H++LSN+YA A WD
Sbjct: 601 EIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDN 660
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
A VRK M++K ++K+ G SW E Q +HYFS + + ++ L+ D GY
Sbjct: 661 VAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGY 720
Query: 661 VPD 663
VPD
Sbjct: 721 VPD 723
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 216/410 (52%)
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
D +GK +H + + G L+ N L+N Y + L A +FD + N+IS+V+L
Sbjct: 49 ADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLA 108
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
Y + + L L K G ++ F ++L + + +H+ V+K
Sbjct: 109 QGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHH 168
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
D FV LI+ Y+ +D+A VF +I D+ +W+ ++ YA+ E++ LF +M
Sbjct: 169 ADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQM 228
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
G P+ T S L + ++ G+ +H +K + FV +L+ Y+K +
Sbjct: 229 RIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEI 288
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
++ + F+EM + D++ W+ +IA + S EA++L M PN +T++++L
Sbjct: 289 IDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQAC 348
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
+ +++ GKQ H C++K G +SNV + +A++D+YAKCG + ++ K+F+ L +N V+WN
Sbjct: 349 ASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWN 408
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
T++VGY Q G G A+ +++ M E+ ++P + T+ VL A + +E G
Sbjct: 409 TIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPG 458
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/662 (34%), Positives = 378/662 (57%), Gaps = 27/662 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF +V N L++MY K D+++LFDE+PERNV+SW+AL S + Q A
Sbjct: 183 VVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEA 242
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F MV ++PN ++ V+AC D+ GK IHG + + G + + +N L++M
Sbjct: 243 VGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDM 302
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L+ A VF+ + + +SW ++++ C H H +
Sbjct: 303 YAKVGDLADAISVFEKIKQPDIVSWNAVIAG---CVLHEHHEQ----------------- 342
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +LG +K Q+HS + K +E D FV++GL+++Y+KC+ L+ A F+ +
Sbjct: 343 -----ALELLGQMK--RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE 395
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL AW+A+I GY+Q + EA+ LFV+M G+ ++ T S +L + A ++ RQ+
Sbjct: 396 KDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQV 455
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L +K GF S +V N+++D Y KC +E++ + F+E D+VS+ ++I +
Sbjct: 456 HGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQG 515
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA++L +M P+ + S++LN +++ A E GKQ H I+K GF ++ G++L
Sbjct: 516 EEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSL 575
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V+MYAKCG ++DA + F L+ + +VSW+ M+ G AQHG GR+AL++++ M + + PN
Sbjct: 576 VNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNH 635
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
T + VL AC H GLV E YF SM G P +H A ++ L G+ A E +
Sbjct: 636 ITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVN 695
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
P E N VW LL + HKD+ LGR AAE + +PE + H++L+N+YA A W+
Sbjct: 696 KMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWEN 755
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
A+VR++M++ +KK+ G SW E+++K++ F + ++ +++ +++LS + GY
Sbjct: 756 VAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGY 815
Query: 661 VP 662
VP
Sbjct: 816 VP 817
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 193/600 (32%), Positives = 305/600 (50%), Gaps = 39/600 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ SG + NHL+ +Y K A+KL DE E +++SWSALISG++Q G+ A
Sbjct: 82 ITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGA 141
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M ++ N +T+ + AC+ D R GK++HG + SG E + V+N L+ M
Sbjct: 142 LMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVM 201
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ---CGEHVHGLKIFLLSRKSGVAISE 177
Y KC ++ +FD ERN +SW +L S Y Q CGE V +F SG+ +E
Sbjct: 202 YAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAV---GLFYEMVLSGIKPNE 258
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
FS +S++ AC L + G IH + K ++D F A L+++YAK L A VF
Sbjct: 259 FSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEK 318
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
I+ PD+ +W+A+I G +A++L +M
Sbjct: 319 IKQPDIVSWNAVIAGCVLHEHHEQALELLGQM---------------------------K 351
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
RQLHS ++KM S FV+ ++D YSKC+LLE++ F+ + E D+++WNA+I+G+
Sbjct: 352 RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQY 411
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA+ L +M EG N T S IL ++ + + +Q H VK GF S++ +
Sbjct: 412 WEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVV 471
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
++L+D Y KC + DA ++F+ + +LVS+ +M+ YAQ+G G EAL+++ MQ+ ++K
Sbjct: 472 NSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELK 531
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ +L+AC ++ E+G + I +G + S+V+++A G A
Sbjct: 532 PDRFVCSSLLNACANLSAFEQG-KQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGR 590
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSA-HIMLSNVYAEAN 596
S E V W ++ G H GR A + E S HI L +V N
Sbjct: 591 AF-SELTERGIVSWSAMIGGLAQHGH---GRQALQLFNQMLKEGVSPNHITLVSVLGACN 646
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 168/585 (28%), Positives = 285/585 (48%), Gaps = 66/585 (11%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P +Y +S C + R G +IH + +SGL + + N LIN+Y KC A+ +
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
D S E + +SW +L+S Y Q G L F GV +EF+ +SVL AC+++ +L
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G Q+H +V E D FVA L+ +YAKC++ + R+F I ++ +W+AL Y
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q EA+ LF +M SG+ P+E + S ++ A ++++ G+ +H +IK+G+
Sbjct: 234 VQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDP 293
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
F AN ++D Y+K L +++ F+++ + D+VSWNA+IAG + H+ +A+ELL M
Sbjct: 294 FSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM--- 350
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
+Q H ++K +S++ + LVDMY+KC L DA
Sbjct: 351 ------------------------KRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDA 386
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC--- 490
R F+ L K+L++WN ++ GY+Q+ EAL ++ M + I N T +L +
Sbjct: 387 RMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGL 446
Query: 491 --VHI-----GL-VEEGWH----YFNSMIRDHGISPRMDH---------------IASVV 523
VH+ GL V+ G+H NS+I +G ++ S++
Sbjct: 447 QVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMI 506
Query: 524 HLFACRGQTRRAYEF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD-P 579
+A GQ A + ++ ++P++ V LL+ C G+ IL
Sbjct: 507 TAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFV 566
Query: 580 EDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
D A L N+YA+ D+ + + E+ + SW+ +
Sbjct: 567 LDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI-----VSWSAM 606
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 177/327 (54%)
Query: 148 LLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
L+ + Q E I L K + S + +L C +L+ G+QIH+ + K
Sbjct: 27 LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
L D + LINLY+KC A ++ PDL +WSALI GYAQ G A+ F
Sbjct: 87 LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
+M G+ +E TFS VL A + VK+ G+Q+H +++ GF FVANT++ Y+KC+
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCD 206
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
+S + FDE+ E +VVSWNAL + ++ GEA+ L +M+ G PN ++ S+++N
Sbjct: 207 EFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVN 266
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ + GK H ++K G+D + +ALVDMYAK G L DA VF+ + ++VS
Sbjct: 267 ACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVS 326
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQEN 474
WN ++ G H +ALE+ M+
Sbjct: 327 WNAVIAGCVLHEHHEQALELLGQMKRQ 353
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/658 (33%), Positives = 378/658 (57%), Gaps = 6/658 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N + NHL+ MY + + A+ +FDEMP +N +SW+++I+ +Q AL F M+
Sbjct: 75 NTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSML 134
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
P+ + V ACA GD G+++H + +S + V N L+ MY K GL++
Sbjct: 135 RSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVA 194
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA-ISEFSCASVLGAC 187
+F E++ ISW S+++ + Q G + L+IF G+ +EF SV AC
Sbjct: 195 DGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSAC 254
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
VLG+L+ G QIHSL K L+ + + L ++YA+C+KL+ A RVF I PDL +W+
Sbjct: 255 GVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWN 314
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
++I + G EA+ L +M SGL P +T +L A GR +HS ++K+
Sbjct: 315 SIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKL 374
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
G V N++L Y++C ++ F E + DVV+WN+++ + H +L
Sbjct: 375 GLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLF 434
Query: 368 KDMLFEGHCPNL--YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L + P+L + +N+L+ S+++ E KQ H C K G ++ ++ + L+D YA
Sbjct: 435 N--LLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYA 492
Query: 426 KCGRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG L+DA K+F+ + ++ ++ SW++++VGYAQ G R+AL++++ M+ ++PN TF+
Sbjct: 493 KCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFV 552
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVL+AC +GLV+EG +Y++ M +HG+ P +H + V+ L A G+ A +F+ P
Sbjct: 553 GVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPF 612
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP+ V+W+ LL+G KTH D+ +GR AAE IL+ DP ++A+++L N+Y+ + W+E A++
Sbjct: 613 EPDIVMWKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSAAYVLLCNIYSASGDWNEFARL 672
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+K M+ +KK G SW +L+ ++ F + + +++ ++ + + + GYVP
Sbjct: 673 KKAMRSSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYTMLELVGMEMIKAGYVP 730
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 13/260 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V N LL MY + + A +F E +R+V++W+++++ Q EV
Sbjct: 371 LVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVV 430
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F L+ + + + +SA A G K++H ++ GL ++ +SN LI+
Sbjct: 431 FKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDT 490
Query: 121 YGKCGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG L A +F+ + SW SL+ Y Q G L +F R GV + +
Sbjct: 491 YAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVT 550
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG------LINLYAKCEKLDLASR 233
VL AC+ +G + G +S+ +E + V +I+L A+ +L A++
Sbjct: 551 FVGVLTACSRVGLVDEGCYYYSI-----MEPEHGVLPTREHCSCVIDLLARAGRLTEAAK 605
Query: 234 VFSNIQL-PDLTAWSALIGG 252
+ PD+ W L+ G
Sbjct: 606 FVDQMPFEPDIVMWKTLLAG 625
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%)
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
P N V+ + L+ MY +C AR VFD + +KN VSW +++ +AQ+ +AL +
Sbjct: 70 PNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGL 129
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+S M + P+ + AC +G + G
Sbjct: 130 FSSMLRSGTAPDQFALGSTVRACAELGDIGVG 161
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/668 (33%), Positives = 385/668 (57%), Gaps = 8/668 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN-Y 63
GF ++ N L+ MY +F+ ++ A+K+F+EMP R+V+SW++LISG++ G AL Y
Sbjct: 204 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 263
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+R V+ P+ YT + AC G G IHG + + G++ + V+N L++MY K
Sbjct: 264 YRFRNLGVV-PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCK 322
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
L + +FD + R+++SW +++ Y Q G + +K+F+ + + S+
Sbjct: 323 FNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFM-EMVNQFKPDLLTITSI 381
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L AC LG+L+ G +H + E D + LIN+YAKC L + VFS ++ D
Sbjct: 382 LQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDS 441
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+++I Y Q G EA+ LF KM + + P VT+ +L + + G++LH
Sbjct: 442 VSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCD 500
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG--HLASCHYG 361
+ KMGF+S V+NT++D Y+KC + +SLK F+ M D+++WN +IA H C+ G
Sbjct: 501 LAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLG 560
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+ ++ M EG P++ T +IL + S + A GK+ H CI K G +S+V +G+ L+
Sbjct: 561 --LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLI 618
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
+MY+KCG L ++ +VF + +K++V+W ++ +G G++A+ + M+ I P+
Sbjct: 619 EMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHV 678
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
F+ ++ AC H GLVEEG +YF+ M +D+ I PR++H A VV L + +A +FI S
Sbjct: 679 AFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILS 738
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P++P+ +W LLS C+ D + + +E+I+ +P+DT ++++SNVYA WD+
Sbjct: 739 MPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQV 798
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
+RK +K + LKKD GCSW E+QNK++ F T Q ++++++ L+ + GY+
Sbjct: 799 RSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYI 858
Query: 662 PDPIYSSH 669
+ + H
Sbjct: 859 ANLQFVLH 866
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 164/559 (29%), Positives = 289/559 (51%), Gaps = 5/559 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFD-EMPERNVISWSALISGFSQIGMPEV 59
+IT G H +VI L+ Y F + +F P NV W+++I + G+
Sbjct: 98 IITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSE 157
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL+ + L+P+ YT+ ++ACA D K IH R+ G + ++ N LI+
Sbjct: 158 ALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALID 217
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY + L A+ VF+ R+ +SW SL+S Y G L+I+ R GV ++
Sbjct: 218 MYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYT 277
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+SVL AC LG+++ G IH L+ K ++ D V GL+++Y K L R+F +
Sbjct: 278 MSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMV 337
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
L D +W+ +I GY+Q+G E+I LF++M + P +T + +L A + + G+
Sbjct: 338 LRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKY 396
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +I G+ T +N +++ Y+KC L S + F M D VSWN++I ++ +
Sbjct: 397 VHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGS 456
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+ EA++L K M+ P+ TY +L++S+ + + GK+ HC + K GF+SN+V+ +
Sbjct: 457 FDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNT 515
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMYAKCG + D+ KVF+++ ++++++WNT++ L + S M+ + P+
Sbjct: 516 LVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPD 575
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
T + +L C + +G + I G+ + ++ +++ G R +++
Sbjct: 576 MATMLSILPVCSLLAAKRQG-KEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVF 634
Query: 540 KSSPIEPNKVVWRCLLSGC 558
K + + V W L+S C
Sbjct: 635 KLMKTK-DVVTWTALISAC 652
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 166/312 (53%), Gaps = 4/312 (1%)
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP--DLTAWSALIGGYAQ 255
++HSL+ L + LI YA + VF + P ++ W+++I
Sbjct: 93 KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF-RLASPSNNVYXWNSIIRALTH 151
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G EA+ L+ + L P TF V+ A A + + + +H ++ MGF S ++
Sbjct: 152 NGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYI 211
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
N ++D Y + L+++ K F+EM DVVSWN+LI+G+ A+ ++ EA+E+ G
Sbjct: 212 GNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGV 271
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+ YT S++L + ++E G H I K G +V++ + L+ MY K L D R+
Sbjct: 272 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRR 331
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+FD + ++ VSWNTM+ GY+Q GL E+++++ M N+ KP+ T +L AC H+G
Sbjct: 332 IFDKMVLRDAVSWNTMICGYSQVGLYEESIKLF-MEMVNQFKPDLLTITSILQACGHLGD 390
Query: 496 VEEGWHYFNSMI 507
+E G + + MI
Sbjct: 391 LEFGKYVHDYMI 402
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 167/383 (43%), Gaps = 39/383 (10%)
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
+ FS + A A T +LHSLII +G + ++ Y+ S F
Sbjct: 72 QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 131
Query: 338 -EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
++V WN++I + + EA+ L + P+ YT+ +++N + + E
Sbjct: 132 LASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFE 191
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
K H ++ GF S++ IG+AL+DMY + L+ ARKVF+ + +++VSWN+++ GY
Sbjct: 192 MAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 251
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG----------------- 499
+G EALEIY + + P+ T VL AC +G VEEG
Sbjct: 252 ANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI 311
Query: 500 --------WHYFNSMIRDHGISPRM--DHIASVVHLFACRGQTRRAYEFIK-----SSPI 544
+ FN +I I +M S + Q E IK +
Sbjct: 312 VNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQF 371
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE-DTSAHIMLSNVYAEANMWDETAK 603
+P+ + +L C DL G+Y + ++++ E DT+A +L N+YA+ + +
Sbjct: 372 KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQE 431
Query: 604 VRKIMKEKSLKKDTGCSWTELQN 626
V MK K SW + N
Sbjct: 432 VFSGMKCKD-----SVSWNSMIN 449
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/670 (33%), Positives = 387/670 (57%), Gaps = 12/670 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN-Y 63
GF ++ N L+ MY +F+ ++ A+K+F+EMP R+V+SW++LISG++ G AL Y
Sbjct: 145 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 204
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+R V+ P+ YT + AC G G IHG + + G++ + V+N L++MY K
Sbjct: 205 YRFRNLGVV-PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCK 263
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
L + +FD + R+++SW +++ Y Q G + +K+F+ + + S+
Sbjct: 264 FNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFM-EMVNQFKPDLLTITSI 322
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L AC LG+L+ G +H + E D + LIN+YAKC L + VFS ++ D
Sbjct: 323 LQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDS 382
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+++I Y Q G EA+ LF KM + + P VT+ +L + + G++LH
Sbjct: 383 VSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCD 441
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG--HLASCHYG 361
+ KMGF+S V+NT++D Y+KC + +SLK F+ M D+++WN +IA H C+ G
Sbjct: 442 LAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLG 501
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+ ++ M EG P++ T +IL + S + A GK+ H CI K G +S+V +G+ L+
Sbjct: 502 --LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLI 559
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
+MY+KCG L ++ +VF + +K++V+W ++ +G G++A+ + M+ I P+
Sbjct: 560 EMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHV 619
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
F+ ++ AC H GLVEEG +YF+ M +D+ I PR++H A VV L + +A +FI S
Sbjct: 620 AFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILS 679
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P++P+ +W LLS C+ D + +E+I+ +P+DT ++++SN+YA WD+
Sbjct: 680 MPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQV 739
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSR--FAQFQGIDLHEVMNQLSVHLFDGG 659
+RK +K + LKKD GCSW E+QNK++ F T F QF+ ++++++ L+ + G
Sbjct: 740 RSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFE--EVNKLLGMLAGLMAKEG 797
Query: 660 YVPDPIYSSH 669
Y+ + + H
Sbjct: 798 YIANLQFVLH 807
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/559 (29%), Positives = 289/559 (51%), Gaps = 5/559 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFD-EMPERNVISWSALISGFSQIGMPEV 59
+IT G H +VI L+ Y F + +F P NV W+++I + G+
Sbjct: 39 IITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSE 98
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL+ + L+P+ YT+ ++ACA D K IH R+ G + ++ N LI+
Sbjct: 99 ALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALID 158
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY + L A+ VF+ R+ +SW SL+S Y G L+I+ R GV ++
Sbjct: 159 MYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYT 218
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+SVL AC LG+++ G IH L+ K ++ D V GL+++Y K L R+F +
Sbjct: 219 MSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMV 278
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
L D +W+ +I GY+Q+G E+I LF++M + P +T + +L A + + G+
Sbjct: 279 LRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKY 337
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +I G+ T +N +++ Y+KC L S + F M D VSWN++I ++ +
Sbjct: 338 VHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGS 397
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+ EA++L K M+ P+ TY +L++S+ + + GK+ HC + K GF+SN+V+ +
Sbjct: 398 FDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNT 456
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMYAKCG + D+ KVF+++ ++++++WNT++ L + S M+ + P+
Sbjct: 457 LVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPD 516
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
T + +L C + +G + + G+ + ++ +++ G R +++
Sbjct: 517 MATMLSILPVCSLLAAKRQGKEIHGCIFK-LGLESDVPVGNVLIEMYSKCGSLRNSFQVF 575
Query: 540 KSSPIEPNKVVWRCLLSGC 558
K + + V W L+S C
Sbjct: 576 KLMKTK-DVVTWTALISAC 593
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 166/312 (53%), Gaps = 4/312 (1%)
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP--DLTAWSALIGGYAQ 255
++HSL+ L + LI YA + VF + P ++ W+++I
Sbjct: 34 KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF-RLASPSNNVYLWNSIIRALTH 92
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G EA+ L+ + L P TF V+ A A + + + +H ++ MGF S ++
Sbjct: 93 NGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYI 152
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
N ++D Y + L+++ K F+EM DVVSWN+LI+G+ A+ ++ EA+E+ G
Sbjct: 153 GNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGV 212
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+ YT S++L + ++E G H I K G +V++ + L+ MY K L D R+
Sbjct: 213 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRR 272
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+FD + ++ VSWNTM+ GY+Q GL E+++++ M N+ KP+ T +L AC H+G
Sbjct: 273 IFDKMVLRDAVSWNTMICGYSQVGLYEESIKLF-MEMVNQFKPDLLTITSILQACGHLGD 331
Query: 496 VEEGWHYFNSMI 507
+E G + + MI
Sbjct: 332 LEFGKYVHDYMI 343
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 167/383 (43%), Gaps = 39/383 (10%)
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
+ FS + A A T +LHSLII +G + ++ Y+ S F
Sbjct: 13 QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 72
Query: 338 -EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
++V WN++I + + EA+ L + P+ YT+ +++N + + E
Sbjct: 73 LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFE 132
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
K H ++ GF S++ IG+AL+DMY + L+ ARKVF+ + +++VSWN+++ GY
Sbjct: 133 MAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 192
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG----------------- 499
+G EALEIY + + P+ T VL AC +G VEEG
Sbjct: 193 ANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI 252
Query: 500 --------WHYFNSMIRDHGISPRM--DHIASVVHLFACRGQTRRAYEFIK-----SSPI 544
+ FN +I I +M S + Q E IK +
Sbjct: 253 VNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQF 312
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE-DTSAHIMLSNVYAEANMWDETAK 603
+P+ + +L C DL G+Y + ++++ E DT+A +L N+YA+ + +
Sbjct: 313 KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQE 372
Query: 604 VRKIMKEKSLKKDTGCSWTELQN 626
V MK K SW + N
Sbjct: 373 VFSGMKCKD-----SVSWNSMIN 390
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/631 (35%), Positives = 360/631 (57%)
Query: 32 LFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGD 91
+FDEMPERN +S+ LI G++Q A F + E N + + + S
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
A G+ +HG + + G N+ + LI+ Y G +S A+ VFD ++ +SW +++S
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
Y + L+ F R +G + F+ A VL AC L N G +H V K E D
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
+V +GL+ LY +C D A R F ++ D+ WS +I +AQ G++ +A+++F +M
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
+ ++P++ TFS VL A AD++ + +H +K G S+ FV+N ++ Y+KC +E+
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQ 301
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
S++ F+ + + + VSWN +I ++ A+ L +ML TYS+IL +
Sbjct: 302 SMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACAT 361
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ A+E G Q HC K + +V +G+AL+DMYAKCG + DAR +FD L ++ VSWN +
Sbjct: 362 LAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAI 421
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
+ GY+ HGLG EA++++++M+E K KP++ TF+GVLSAC + G ++EG YF SM +D+G
Sbjct: 422 ICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYG 481
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA 571
I P M+H +V L G +A +FI+ P EP+ ++WR LL C H D+ LGR +A
Sbjct: 482 IEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISA 541
Query: 572 EKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+++L +P D ++H++LSN+YA A W A VRK MK K +KK+ G SW E Q +H F
Sbjct: 542 QRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCF 601
Query: 632 STSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+ + + ++ ++ L++ GY P
Sbjct: 602 TVADTSHADLKLINGMLEFLNMKTRKAGYSP 632
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 233/468 (49%), Gaps = 7/468 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ N L+ Y ++ A+++FDE+ ++++SW+ +I+ +++ A
Sbjct: 72 VLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEA 131
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F M +PN +T+ G + AC + +GK +H + ++ E + +V L+ +
Sbjct: 132 LEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLEL 191
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG A F + + I W ++S + Q G+ L+IF R++ V ++F+
Sbjct: 192 YTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTF 251
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+SVL A A + +L + IH K L D FV+ L+ YAKC ++ + +F +
Sbjct: 252 SSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSD 311
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W+ +I Y QLG A+ LF M + +EVT+S +L A A + G Q+
Sbjct: 312 RNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQV 371
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L K + V N ++D Y+KC ++++ FD +D D VSWNA+I G+
Sbjct: 372 HCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLG 431
Query: 361 GEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
EAI++ +++ E C P+ T+ +L+ S+ ++ GKQ + + G + + +
Sbjct: 432 VEAIKMF-NLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYT 490
Query: 419 ALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGR 462
+V + + G L+ A K + + +++ W +L H LGR
Sbjct: 491 CMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGR 538
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/658 (34%), Positives = 374/658 (56%), Gaps = 4/658 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S F +V L+ Y+K I+ A+ +FD +PE++ ++W+ +ISG ++G V+
Sbjct: 174 LVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVS 233
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F ++ + P+ Y +SAC+ GK+IH + R G E ++ + N LI+
Sbjct: 234 LQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDS 293
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + +A +FD +N ISW +LLS Y Q H +++F K G+ F+C
Sbjct: 294 YVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFAC 353
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L +CA L L+ G Q+H+ K L D +V LI++YAKC+ L A +VF
Sbjct: 354 SSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAA 413
Query: 241 PDLTAWSALIGGYAQLGKACE---AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
D+ ++A+I GY++LG E A+++F M + PS +TF +L A A +
Sbjct: 414 DDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLS 473
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+Q+H L+ K G + F + ++ YS C L++S FDEM D+V WN++ +G++
Sbjct: 474 KQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQ 533
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA+ L ++ P+ +T+ +++ + ++ +++ G++ HC ++K G + N I
Sbjct: 534 SENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYIT 593
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL+DMYAKCG DA K FD +S+++V WN+++ YA HG GR+AL++ M I+
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIE 653
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
PN TF+GVLSAC H GLVE+G F M+R GI P +H +V L G+ A E
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARE 712
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
I+ P +P +VWR LLSGC ++ L YAAE + +DP+D+ + +LSN+YA M
Sbjct: 713 LIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGM 772
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
W + KVR+ MK + + K+ G SW E+ ++H F + + + ++EV++ L V +
Sbjct: 773 WTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 181/659 (27%), Positives = 329/659 (49%), Gaps = 56/659 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPE-- 58
+I SG + N L+ +Y + + A+K+F++MPERN+++WS ++S + G E
Sbjct: 70 IIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEES 129
Query: 59 --VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGK----EIHGRMYRSGLELNSH 112
V L+++R PN Y + AC+ G SG+ ++ + +S + + +
Sbjct: 130 LVVFLDFWRTRKN---SPNEYILSSFIQACS--GLDGSGRWMVFQLQSFLVKSRFDRDVY 184
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
V LI+ Y K G + A+ VFDA E+++++W +++S + G L++F +
Sbjct: 185 VGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGN 244
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
V + ++VL AC++L L+ G QIH+ + + E D + LI+ Y KC ++ A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAH 304
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
++F + ++ +W+ L+ GY Q EA++LF M GL P S +L + A +
Sbjct: 305 KLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLH 364
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
G Q+H+ IK + ++V N+++D Y+KC+ L E+ K FD DVV +NA+I
Sbjct: 365 ALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIE 424
Query: 353 GHL---ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
G+ +A+ + DM F P+L T+ ++L S+ + ++ KQ H + K G
Sbjct: 425 GYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFG 484
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ ++ GSAL+ +Y+ C L D+R VFD + K+LV WN+M GY Q EAL ++
Sbjct: 485 LNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFL 544
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI----------------- 512
+Q ++ +P++ TF+ +++A ++ ++ G F+ + G+
Sbjct: 545 ELQLSRDRPDEFTFVDMVTAAGNLASLQLG-QEFHCQLLKRGLECNPYITNALLDMYAKC 603
Query: 513 -SPRMDHIA-------------SVVHLFACRGQTRRAYEFIKS---SPIEPNKVVWRCLL 555
SP H A SV+ +A G+ R+A + ++ IEPN + + +L
Sbjct: 604 GSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVL 663
Query: 556 SGCKTHKDLV---LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
S C +H LV L ++ +PE T ++ + ++ A +E ++ + M K
Sbjct: 664 SAC-SHAGLVEDGLKQFELMLRFGIEPE-TEHYVCMVSLLGRAGRLNEARELIEKMPTK 720
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 252/472 (53%), Gaps = 20/472 (4%)
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
+HG++ SGLEL++++SN L+N+Y + G + A+ VF+ ERN ++W +++S+ G
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 158 HVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGM--QIHSLVFKCALEFDKFV 214
+ L +FL R + +E+ +S + AC+ L M Q+ S + K + D +V
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYV 185
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
LI+ Y K +D A VF + W+ +I G ++G++ ++ LF ++ +
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNV 245
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+P S VL A + + GG+Q+H+ I++ G + N ++D Y KC + + K
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHK 305
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
FD M +++SW L++G+ + + EA+EL M G P+++ S+IL + + A
Sbjct: 306 LFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHA 365
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
+E+G Q H +K ++ + ++L+DMYAKC L +ARKVFD ++ ++V +N M+ G
Sbjct: 366 LEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEG 425
Query: 455 YAQHGLGRE---ALEIYSMMQENKIKPNDNTFIGVLSAC---VHIGLVEEGWHYFNSMIR 508
Y++ G E AL I+ M+ I+P+ TF+ +L A +GL ++ + ++
Sbjct: 426 YSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ----IHGLMF 481
Query: 509 DHGISPRMDHIASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G++ + ++++ +++ C +R ++ +K + V+W + SG
Sbjct: 482 KFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDL----VIWNSMFSG 529
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/660 (34%), Positives = 365/660 (55%), Gaps = 3/660 (0%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVC 69
++ +NH +Y K S A +FDEMP+RNV SW+ +I G ++ G+ +F M+
Sbjct: 155 MVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLN 214
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
+ P+ + Y + +C GK +H ++ G + VS L+NMY K G +
Sbjct: 215 SGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIED 274
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
+ +VF+ E N +SW +++S G H+ +F+ + + ++ SV A
Sbjct: 275 SYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGK 334
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN--IQLPDLTAWS 247
L ++ +G ++ + + +E + V LI++Y+KC L A VF I T W+
Sbjct: 335 LVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWN 394
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A+I GY+Q G + EA++L+V+M +G+ T+ V A A K GR +H +++K
Sbjct: 395 AMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKC 454
Query: 308 GFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G V N + D YSKC LE+ K FD M+E D+VSW L+ + S EA+
Sbjct: 455 GLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALAT 514
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M EG PN +T+S++L + + +E+G+Q H + K G D+ I SAL+DMYAK
Sbjct: 515 FCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAK 574
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + +A KVFD +S+ ++VSW ++ GYAQHGL +AL+++ M+ + IK N T + V
Sbjct: 575 CGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCV 634
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L AC H G+VEEG YF M +G+ P M+H A ++ L G+ A EFI+ P+EP
Sbjct: 635 LFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEP 694
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
N++VW+ LL GC+ H ++ LG AA KILS PE ++ +++LSN Y E +++ +R
Sbjct: 695 NEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRN 754
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIY 666
+MK++ +KK+ G SW ++ ++H F + Q +++ + +L + GYVPD Y
Sbjct: 755 VMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAMGYVPDLRY 814
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 241/482 (50%), Gaps = 9/482 (1%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVS--NCLINMYGKCGLLSSAQFVFDASLERNSI 143
CA +G R K +HG + +S E + N ++Y KC +A VFD +RN
Sbjct: 128 CAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVF 187
Query: 144 SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV 203
SW ++ + G G K F SG+ +F+ ++++ +C L +L++G +H+ +
Sbjct: 188 SWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQI 247
Query: 204 FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
FV+ L+N+YAK ++ + VF+ + + +W+A+I G G EA
Sbjct: 248 VMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAF 307
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
DLFV+M + P+ T V A + + G+++ + ++G V ++D Y
Sbjct: 308 DLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMY 367
Query: 324 SKCELLEESLKTFDE--MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYT 381
SKC L ++ FD ++ WNA+I+G+ S EA+EL M G +LYT
Sbjct: 368 SKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYT 427
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV-IGSALVDMYAKCGRLNDARKVFDHL 440
Y ++ N + ++++G+ H ++K G D VV + +A+ D Y+KCG L D RKVFD +
Sbjct: 428 YCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRM 487
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+++VSW T++ Y+Q LG EAL + +M+E PN TF VL +C + +E G
Sbjct: 488 EERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYG- 546
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK 559
+ ++ G+ ++++ ++A C T F K S P+ V W ++SG
Sbjct: 547 RQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKIS--NPDIVSWTAIISGYA 604
Query: 560 TH 561
H
Sbjct: 605 QH 606
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 154/526 (29%), Positives = 250/526 (47%), Gaps = 25/526 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF ++ LL MY K I D+ +F+ M E N +SW+A+ISG + G+ A
Sbjct: 247 IVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEA 306
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M PN YT V A D GKE+ G+E N V LI+M
Sbjct: 307 FDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDM 366
Query: 121 YGKCGLLSSAQFVFDASLERNSIS--WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
Y KCG L A+ VFD + ++ W +++S Y Q G L++++ ++G+ +
Sbjct: 367 YSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLY 426
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF-VAMGLINLYAKCEKLDLASRVFSN 237
+ SV A A +L+ G +H +V KC L+ V + + Y+KC L+ +VF
Sbjct: 427 TYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDR 486
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
++ D+ +W+ L+ Y+Q EA+ F M G P++ TFS VL + A + G
Sbjct: 487 MEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYG 546
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
RQ+H L+ K G + + + ++D Y+KC + E+ K FD++ D+VSW A+I+G+
Sbjct: 547 RQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQH 606
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDS 412
+A++L + M G N T +L S +E G + V P +
Sbjct: 607 GLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEH 666
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGR-EALEI 467
I +D+ + GRL+DA + + N + W T+L G HG LG A +I
Sbjct: 667 YACI----IDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKI 722
Query: 468 YSMMQENKIKPN-DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
S I+P T++ + + + G E+G N M +D G+
Sbjct: 723 LS------IRPEYSATYVLLSNTYIETGSYEDGLSLRNVM-KDQGV 761
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 173/313 (55%), Gaps = 8/313 (2%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLIN----LYAKCEKLDLASRVFSNI 238
VL CA G+++ +H LV K E DK + M L N +Y+KC + A VF +
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFE-DKDL-MVLFNHAAHVYSKCSEFRAACGVFDEM 181
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
++ +W+ +I G + G + F +M +SG++P + +S ++ + + G+
Sbjct: 182 PQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGK 241
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H+ I+ GF++ FV+ ++L+ Y+K +E+S F+ M EH+ VSWNA+I+G ++
Sbjct: 242 MVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNG 301
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ EA +L M PN+YT ++ + + GK+ C + G + NV++G+
Sbjct: 302 LHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 361
Query: 419 ALVDMYAKCGRLNDARKVFD--HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
AL+DMY+KCG L+DAR VFD ++ WN M+ GY+Q G +EALE+Y M +N I
Sbjct: 362 ALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGI 421
Query: 477 KPNDNTFIGVLSA 489
+ T+ V +A
Sbjct: 422 TSDLYTYCSVFNA 434
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/638 (34%), Positives = 366/638 (57%), Gaps = 7/638 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ +Y+ F A+++F +M + ++++ LISG +Q G E AL F M L
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ T ++ACAS GD + GK++H + ++G+ + L+++Y KCG + +A +
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ N + W +L +Y Q + +IF + +G+ ++F+ +L C G +
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQI 362
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G QIHSL K E D +V+ LI++Y+K LD A ++ ++ D+ +W+++I GY
Sbjct: 363 ELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGY 422
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q EA+ F +M G+ P + + A A +K G Q+H+ + G+++
Sbjct: 423 VQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADI 482
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ NT+++ Y++C EE+ F E+D D ++WN LI+G S Y +A+ + M
Sbjct: 483 SIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQA 542
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G N++T+ + ++ +++ I+ GKQ H VK G S + +AL+ +Y KCG + DA
Sbjct: 543 GAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDA 602
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+ +F +S +N VSWNT++ +QHG G EAL+++ M++ +KPND TFIGVL+AC H+
Sbjct: 603 KMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHV 662
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLVEEG YF SM +G++P DH A VV + GQ RA F+ PI N ++WR
Sbjct: 663 GLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRT 722
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LLS CK HK++ +G AA+ +L +P D++++++LSN YA W +VRK+MK++ +
Sbjct: 723 LLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGI 782
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
+K+ G SW E++N +H F F G LH + +Q+
Sbjct: 783 RKEPGRSWIEVKNAVHAF-------FVGDRLHPLSDQI 813
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/560 (27%), Positives = 289/560 (51%), Gaps = 2/560 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G + + N L+ +Y K + A+++F E+ R+ +SW A++SG++Q G+ + A
Sbjct: 70 VVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAF 129
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M + P Y +SAC G+ IH ++Y+ + V N LI +Y
Sbjct: 130 RLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALY 189
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
G A+ VF L + +++ +L+S + QCG L+IF + SG+ + A
Sbjct: 190 LGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVA 249
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L ACA +G+L+ G Q+HS + K + FD L++LY KC ++ A +F+
Sbjct: 250 SLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRT 309
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+ ++ Y Q+ ++ ++F +M ++G+ P++ T+ +L + G Q+H
Sbjct: 310 NVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIH 369
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
SL IK GF S +V+ ++D YSK L+++ K + +++ DVVSW ++IAG++
Sbjct: 370 SLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCE 429
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA+ K+M G P+ ++ + + I A+ G Q H + G+ +++ I + LV
Sbjct: 430 EALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLV 489
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
++YA+CGR +A +F + K+ ++WN ++ G+ Q L +AL ++ M + K N
Sbjct: 490 NLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVF 549
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TFI +SA ++ +++G ++ G + + +++ L+ G A + I S
Sbjct: 550 TFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDA-KMIFS 607
Query: 542 SPIEPNKVVWRCLLSGCKTH 561
N+V W +++ C H
Sbjct: 608 EMSLRNEVSWNTIITSCSQH 627
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/477 (31%), Positives = 239/477 (50%), Gaps = 3/477 (0%)
Query: 82 AVSACASRGDARS-GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
A+ AC RG+ EIH GL + + N LI++Y K GL+ A+ VF R
Sbjct: 48 ALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR 107
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
+ +SWV++LS Y Q G +++ + V + + +SVL AC G IH
Sbjct: 108 DHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIH 167
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
+ V+K A + FV LI LY LA RVF ++ D ++ LI G+AQ G
Sbjct: 168 AQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGE 227
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
A+ +F +M SGL P VT + +L A A V + G+QLHS ++K G S ++L
Sbjct: 228 CALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLL 287
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
D Y KC +E + F+ D +VV WN ++ + ++ E+ M G PN +
Sbjct: 288 DLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKF 347
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
TY IL + IE G+Q H +K GF+S++ + L+DMY+K L+ ARK+ + L
Sbjct: 348 TYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEML 407
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+++VSW +M+ GY QH EAL + MQ+ + P++ SAC I + +G
Sbjct: 408 EKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGL 467
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++ + G + + ++V+L+A G++ A+ + +++ W L+SG
Sbjct: 468 Q-IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREID-HKDEITWNGLISG 522
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 243/520 (46%), Gaps = 16/520 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + IT LL +YVK I A +F+ NV+ W+ ++ + QI +
Sbjct: 271 LLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKS 330
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M + PN +TY + C G G++IH ++G E + +VS LI+M
Sbjct: 331 FEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDM 390
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K L A+ + + +R+ +SW S+++ Y Q L F + GV
Sbjct: 391 YSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGL 450
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS ACA + ++ G+QIH+ V+ D + L+NLYA+C + + A +F I
Sbjct: 451 ASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDH 510
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+ LI G+ Q +A+ +F+KM +G + TF + A A++ + G+Q+
Sbjct: 511 KDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQV 570
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +K G +S T VAN ++ Y KC +E++ F EM + VSWN +I
Sbjct: 571 HGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRG 630
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVV 415
EA++L M EG PN T+ +L S + +E G ++ + P D
Sbjct: 631 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYAC 690
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ VD+ + G+L+ AR+ D + + N + W T+L H + +EI + ++
Sbjct: 691 V----VDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVH----KNIEIGELAAKH 742
Query: 475 --KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
+++P+D+ +LS + M++D GI
Sbjct: 743 LLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGI 782
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/665 (34%), Positives = 369/665 (55%), Gaps = 4/665 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G + NV + L+ MY K ++ A+K+FD + ERN++ W+A++ G++Q G +
Sbjct: 376 IKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVM 435
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M C P+ +TY +SACA G+++H + + E N V N L++MY
Sbjct: 436 KLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMY 495
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG L A+ F+ R+++SW +++ Y Q + +F G+A E S A
Sbjct: 496 AKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLA 555
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L CA L L+ G Q+H + K L+ + LI++Y KC ++ A VFS +
Sbjct: 556 SILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSR 615
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ + +A+I GYAQ EAIDLF +M + GL PSE+TF+ +L A + GRQ+H
Sbjct: 616 SVVSMNAIIAGYAQ-NDLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIH 674
Query: 302 SLIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCH 359
LI K G F+ ++L Y + ++ F E + W A+I+GH +
Sbjct: 675 CLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGC 734
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA++L ++M P+ T++++L S + ++ G+ H I G DS+ + GSA
Sbjct: 735 SEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSA 794
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKN-LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+VDMYAKCG + + +VF+ + SKN ++SWN+M+VG+A++G AL+I+ M+ +I+P
Sbjct: 795 VVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRP 854
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+D TF+GVL+AC H G V EG F+ M+ + I PR+DH A ++ L G + A EF
Sbjct: 855 DDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEF 914
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I EPN ++W LL C+ H D + GR AAEK++ +PE++S +++LSN+YA + W
Sbjct: 915 IDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNW 974
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
DE VR+ M+EK L+K GCSW + K + F ++H ++ L + +
Sbjct: 975 DEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDLIALMKED 1034
Query: 659 GYVPD 663
GY+ +
Sbjct: 1035 GYIAE 1039
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 291/558 (52%), Gaps = 38/558 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF N L+ MY K + DA+K+FD + + + +SW+A+I+G+ Q+G+PE A
Sbjct: 208 VIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEA 267
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M L P+ +V ++AC GL
Sbjct: 268 LKVFEDMQKLGLVPDQVAFVTVITACV------------------GL------------- 296
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
G L A +F N ++W ++S + + G + + F K+GV + +
Sbjct: 297 ----GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTL 352
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A A L L G+ +H+ K L + +V LIN+YAKCEK++ A +VF +
Sbjct: 353 GSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDE 412
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L W+A++GGYAQ G A + + LF +M G P E T++ +L A A ++ GRQL
Sbjct: 413 RNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQL 472
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS IIK F FV NT++D Y+KC LEE+ + F+ + D VSWNA+I G++
Sbjct: 473 HSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDE 532
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA + + M+ +G P+ + ++IL+ +++ A+E G+Q HC +VK G + + GS+L
Sbjct: 533 DEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSL 592
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMY KCG + AR VF + S+++VS N ++ GYAQ+ L EA++++ MQ + P++
Sbjct: 593 IDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSE 651
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF +L AC + G + +I+ G+ D + + + Q + + +
Sbjct: 652 ITFASLLDACTGPYKLNLG-RQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILF 710
Query: 541 SSPIEP-NKVVWRCLLSG 557
S P + ++W ++SG
Sbjct: 711 SEFQYPKSTILWTAIISG 728
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/557 (27%), Positives = 292/557 (52%), Gaps = 48/557 (8%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
+Y K + A K F+++ +R++++W++++S +S+ G E + F + C + PN +T
Sbjct: 125 LYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFT 184
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y +S+CA D GK++H + + G E NS LI+MY KCG L A+ +FDA +
Sbjct: 185 YAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVV 244
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
+ +++SW ++++ Y Q G LK+F +K G+ + + +V+ AC LG
Sbjct: 245 DPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLG------- 297
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+LD A +F + ++ AW+ +I G+ + G
Sbjct: 298 ----------------------------RLDDACDLFVQMPNTNVVAWNVMISGHVKRGC 329
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
EAID F M+ +G+ + T VL A A ++ G +H+ IK G +S +V ++
Sbjct: 330 DIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSS 389
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+++ Y+KCE +E + K FD +DE ++V WNA++ G+ + + + ++L +M G P+
Sbjct: 390 LINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPD 449
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
+TY++IL+ + + +E G+Q H I+K F+ N+ + + LVDMYAKCG L +AR+ F+
Sbjct: 450 EFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFE 509
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+ +++ VSWN ++VGY Q EA ++ M + I P++ + +LS C ++ +E+
Sbjct: 510 FIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQ 569
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
G +++ G+ + +S++ + ++K IE + V+ C+ S
Sbjct: 570 GEQVHCFLVKS-GLQTCLYAGSSLIDM------------YVKCGAIEAARYVFSCMPSRS 616
Query: 559 KTHKDLVLGRYAAEKIL 575
+ ++ YA ++
Sbjct: 617 VVSMNAIIAGYAQNDLV 633
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/475 (29%), Positives = 244/475 (51%), Gaps = 43/475 (9%)
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
+R+ K IH + + G + + ++++Y KCG + A F+ +R+ ++W S+LS
Sbjct: 97 SRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSM 156
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
Y + G + F + GV+ ++F+ A VL +CA L ++ +G Q+H V K EF+
Sbjct: 157 YSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFN 216
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
F LI++Y+KC L A ++F + PD +W+A+I GY Q+G EA+ +F M
Sbjct: 217 SFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQK 276
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
GL+P +V F V+ A + GR L++
Sbjct: 277 LGLVPDQVAFVTVITACVGL-----GR------------------------------LDD 301
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+ F +M +VV+WN +I+GH+ EAI+ K+M G T ++L+ +
Sbjct: 302 ACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIAS 361
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ A+ +G H +K G +SNV +GS+L++MYAKC ++ A+KVFD L +NLV WN M
Sbjct: 362 LEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAM 421
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
L GYAQ+G + ++++S M+ P++ T+ +LSAC + +E G +S I H
Sbjct: 422 LGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMG-RQLHSFIIKHN 480
Query: 512 ISPRMDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+ ++V ++A G + R+ +EFI++ + V W ++ G +D
Sbjct: 481 FEYNLFVENTLVDMYAKCGALEEARQQFEFIRNR----DNVSWNAIIVGYVQEED 531
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 249/490 (50%), Gaps = 17/490 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I F N+ N L+ MY K + +A++ F+ + R+ +SW+A+I G+ Q + A
Sbjct: 476 IIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEA 535
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
N FR M+ + P+ + +S CA+ G+++H + +SGL+ + + LI+M
Sbjct: 536 FNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDM 595
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + +A++VF R+ +S ++++ Y Q + V + +F + G+ SE +
Sbjct: 596 YVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQ-NDLVEAIDLFQEMQNEGLNPSEITF 654
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFD-KFVAMGLINLYAKCEKLDLASRVFSNIQ 239
AS+L AC L +G QIH L+ K L +D F+ + L+ +Y ++ A +FS Q
Sbjct: 655 ASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQ 714
Query: 240 LPDLTA-WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
P T W+A+I G+ Q G + EA+ L+ +M + P + TF+ VL A + + GR
Sbjct: 715 YPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGR 774
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLAS 357
+HSLI +G S + V+D Y+KC ++ S++ F+EM ++DV+SWN++I G +
Sbjct: 775 MIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKN 834
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDS 412
+ A+++ +M P+ T+ +L S + G++ H + P D
Sbjct: 835 GYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDH 894
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIY 468
+ ++D+ + G L +A + D L+ N + W T+L HG GR A E
Sbjct: 895 ----CACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKL 950
Query: 469 SMMQENKIKP 478
++ P
Sbjct: 951 IELEPENSSP 960
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/701 (33%), Positives = 370/701 (52%), Gaps = 36/701 (5%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G ++ N L+ Y KF + +++F M R+V++WS++I+ ++ P A + F
Sbjct: 108 GLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTF 167
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M +EPN T++ + AC + +EIH + SG+E + V+ LI MY KC
Sbjct: 168 ERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKC 227
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G +S A +F ERN +SW +++ + Q + +++ ++G++ + + S+L
Sbjct: 228 GEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLL 287
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+C L G +IHS + + LE D VA LI +Y KC + A F + D+
Sbjct: 288 NSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVI 347
Query: 245 AWSALIGGYAQLG-KACEAID----LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+WSA+I GYAQ G + E++D L +M G+ P++VTF +L A + GRQ
Sbjct: 348 SWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQ 407
Query: 300 LHSLIIKMGFSS------------------------FTFVAN-------TVLDFYSKCEL 328
+H+ I K+GF S F+ + N ++L Y KC
Sbjct: 408 IHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGD 467
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
L + K F EM +VVSWN +IAG+ S + ELL M EG P+ T +IL
Sbjct: 468 LTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEA 527
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ A+E GK H VK G +S+ V+ ++L+ MY+KCG + +AR VFD +S+++ V+W
Sbjct: 528 CGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAW 587
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
N ML GY QHG+G EA++++ M + ++ PN+ TF V+SAC GLV+EG F M
Sbjct: 588 NAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQE 647
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
D + P H +V L G+ + A EFI+ P EP+ VW LL CK+H ++ L
Sbjct: 648 DFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAE 707
Query: 569 YAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKM 628
+AA IL +P + S ++ LSN+YA+A WD++ KVRK+M +K LKKD G S E+ ++
Sbjct: 708 WAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRI 767
Query: 629 HYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
H F A + +H + L+ + + GY PD + H
Sbjct: 768 HTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLH 808
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 172/592 (29%), Positives = 284/592 (47%), Gaps = 55/592 (9%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
N TY + CA GK +H ++ GL ++ ++ N LIN Y K G ++S + VF
Sbjct: 77 NSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVF 136
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
R+ ++W S++++Y F + + + + + S+L AC L+
Sbjct: 137 RRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLE 196
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
+IH++V +E D VA LI +Y+KC ++ LA +F ++ ++ +W+A+I A
Sbjct: 197 KAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANA 256
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q K EA +L+ KM +G+ P+ VTF +L + + GR++HS I + G +
Sbjct: 257 QHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVV 316
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY-----GEAIELLKD 369
VAN ++ Y KC ++++ +TFD M + DV+SW+A+IAG+ S + E +LL+
Sbjct: 317 VANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLER 376
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS----------------- 412
M EG PN T+ +IL S A+E G+Q H I K GF+S
Sbjct: 377 MRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGS 436
Query: 413 --------------NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
NVV ++L+ MY KCG L A KVF +S++N+VSWN M+ GYAQ
Sbjct: 437 IYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQS 496
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
G + E+ S M+ +P+ T I +L AC + +E G ++ G+
Sbjct: 497 GDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVK-LGLESDTVV 555
Query: 519 IASVVHLFACRGQTRRAYE-FIKSSPIEPNKVVWRCLLSGCKTHK------DLVLGRYAA 571
S++ +++ G+ A F K S + V W +L+G H DL R
Sbjct: 556 ATSLIGMYSKCGEVTEARTVFDKIS--NRDTVAWNAMLAGYGQHGIGPEAVDL-FKRMLK 612
Query: 572 EKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKE----KSLKKDTGC 619
E++ P + + + A + E ++ +IM+E K K+ GC
Sbjct: 613 ERV----PPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGC 660
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 240/497 (48%), Gaps = 46/497 (9%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG +V L+ MY K I+ A ++F +M ERNV+SW+A+I +Q A
Sbjct: 208 SGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFEL 267
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+ M+ + PN T+V +++C + G+ IH + GLE + V+N LI MY K
Sbjct: 268 YEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCK 327
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCG-EHVHGL-KIFLL---SRKSGVAISEF 178
C + A+ FD +R+ ISW ++++ Y Q G + L ++F L R+ GV ++
Sbjct: 328 CNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKV 387
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S+L AC+V G L+ G QIH+ + K E D+ + + N+YAKC + A +VFS +
Sbjct: 388 TFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKM 447
Query: 239 QLPDLTAWSAL-------------------------------IGGYAQLGKACEAIDLFV 267
+ ++ AW++L I GYAQ G + +L
Sbjct: 448 ENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLS 507
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
M G P VT +L A + G+ +H+ +K+G S T VA +++ YSKC
Sbjct: 508 SMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCG 567
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
+ E+ FD++ D V+WNA++AG+ EA++L K ML E PN T++ +++
Sbjct: 568 EVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVIS 627
Query: 388 ISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
++ G++ + +KPG +VD+ + GRL +A + +
Sbjct: 628 ACGRAGLVQEGREIFRIMQEDFRMKPGKQHY----GCMVDLLGRAGRLQEAEEFIQRMPC 683
Query: 443 KNLVS-WNTMLVGYAQH 458
+ +S W+ +L H
Sbjct: 684 EPDISVWHALLGACKSH 700
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 212/429 (49%), Gaps = 11/429 (2%)
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
C+ G +++ + ++ G+ ++ + ++ CA L + G +H + + L D
Sbjct: 54 CKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDI 113
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
++ LIN Y+K + +VF + L D+ WS++I YA +A D F +M +
Sbjct: 114 YLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDA 173
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
+ P+ +TF +L A + R++H+++ G + VA ++ YSKC + +
Sbjct: 174 NIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLA 233
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
+ F +M E +VVSW A+I + EA EL + ML G PN T+ ++LN +
Sbjct: 234 CEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTP 293
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
A+ G++ H I + G +++VV+ +AL+ MY KC + DAR+ FD +S ++++SW+ M+
Sbjct: 294 EALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMI 353
Query: 453 VGYAQHGLG-----REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
GYAQ G E ++ M+ + PN TF+ +L AC G +E+G ++ I
Sbjct: 354 AGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQG-RQIHAEI 412
Query: 508 RDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLG 567
G ++ +++A G A E + S N V W LL+ DL
Sbjct: 413 SKVGFESDRSLQTAIFNMYAKCGSIYEA-EQVFSKMENKNVVAWASLLTMYIKCGDLT-- 469
Query: 568 RYAAEKILS 576
+AEK+ S
Sbjct: 470 --SAEKVFS 476
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/709 (33%), Positives = 389/709 (54%), Gaps = 54/709 (7%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+ +++N +L Y I AQKLFD MPER+V+SW++LISG+ G ++ F M
Sbjct: 107 DTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMG 166
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ T+ + +C+S D G +IHG + G + + + L++MY KC L
Sbjct: 167 RMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLD 226
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+ F + E+N +SW ++++ Q + GL++F +K+GV +S+ + ASV +CA
Sbjct: 227 CSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCA 286
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L L++G Q+H K D + +++Y KC L A ++F+++ +L +++A
Sbjct: 287 GLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNA 346
Query: 249 LIGGYAQ----LG----------KACEAI-----------------------------DL 265
+I GYA+ LG +AC I D+
Sbjct: 347 IIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDM 406
Query: 266 FVK---------MFSSGLMPSEVTFSYVLGAFADV--KETIGGRQLHSLIIKMGFSSFTF 314
+ K +F + V+++ ++ A +E +H+ IIK +F
Sbjct: 407 YGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSF 466
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V ++D YSKC ++E++ K D + E VVSWNA+I+G EA + ML G
Sbjct: 467 VGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMG 526
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P+ +TY+ IL+ +++ +E GKQ H I+K S+ I S LVDMY+KCG + D +
Sbjct: 527 VDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQ 586
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+F+ +++ V+WN M+ GYAQHGLG EAL+I+ MQ +KPN TF+ VL AC H+G
Sbjct: 587 LIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMG 646
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
LVE+G HYF+SM+ ++G+ P+++H + VV + GQ +A E I+ P E + V+WR L
Sbjct: 647 LVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTL 706
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
LS CK H ++ + AA IL +PED++A+++LSN+YA A MW+E K+RK+M+ LK
Sbjct: 707 LSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLK 766
Query: 615 KDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
K+ GCSW E+++++H F A + +++E ++ L+ + GY+PD
Sbjct: 767 KEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPD 815
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/557 (25%), Positives = 251/557 (45%), Gaps = 51/557 (9%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC------------- 124
T+ C+ R GK+ H RM + + V+NCLI MY KC
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 125 ------------------GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
G + AQ +FDA ER+ +SW SL+S Y G+H + +FL
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
+ G + A VL +C+ L + G+QIH L K + D L+++YAKC+
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
KLD + + F ++ + +WSA+I G Q ++LF +M +G+ S+ TF+ V
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
+ A + G QLH +K F + + LD Y KC L ++ K F+ + H++ S
Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
+NA+I G+ S +G + + S + I G Q H +
Sbjct: 344 YNAIIVGYARS--------------DKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSM 389
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
K SN+ + +A++DMY KCG L +A VF+ + S++ VSWN ++ + Q+G + L
Sbjct: 390 KSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLS 449
Query: 467 IYSMMQENKIKPNDNTFIGV--LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVH 524
++ + K + ++F+G+ + G++E+ + + +S + I S
Sbjct: 450 LFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVS--WNAIISGFS 507
Query: 525 LFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE-DTS 583
L + ++ + + ++P+ + +L C + LG+ +I+ + + D
Sbjct: 508 LQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAY 567
Query: 584 AHIMLSNVYAE-ANMWD 599
L ++Y++ NM D
Sbjct: 568 ISSTLVDMYSKCGNMQD 584
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/662 (33%), Positives = 374/662 (56%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF N L+ +Y + A+++F+ M +R+ +S+++LISG SQ G + A
Sbjct: 297 VLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKA 356
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ M L+P+ T +SAC+S G GK+ H ++G+ + + L+++
Sbjct: 357 LELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDL 416
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + +A F ++ N + W +L +Y KIF + G+ ++F+
Sbjct: 417 YVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTY 476
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L C+ L + +G QIH+ V K +F+ +V+ LI++YAK KLD A ++F ++
Sbjct: 477 PSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKE 536
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+A+I GYAQ K EA++LF +M G+ + F+ + A A ++ G+Q+
Sbjct: 537 KDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQI 596
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ G+S V N ++ Y++C + ++ FD++ D +SWN+LI+G S H
Sbjct: 597 HAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHC 656
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ L M G N +T+ ++ ++++ ++ GKQ H I+K G DS + + L
Sbjct: 657 EEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVL 716
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ +YAKCG ++DA + F + KN +SWN ML GY+QHG G +AL ++ M++ + PN
Sbjct: 717 ITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNH 776
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+GVLSAC H+GLV+EG YF SM HG+ P+ +H A VV L G RA F++
Sbjct: 777 VTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVE 836
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
PI+P+ +V R LLS C HK++ +G +AA +L +P+D++ +++LSN+YA W
Sbjct: 837 EMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGC 896
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
+ R++MK++ +KK+ G SW E+ N +H F ++E + L+ + GY
Sbjct: 897 RDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGY 956
Query: 661 VP 662
+P
Sbjct: 957 IP 958
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 184/559 (32%), Positives = 292/559 (52%), Gaps = 5/559 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF V+ L+ +Y+ F ++ A +FDEMP R + W+ ++ F M
Sbjct: 94 ILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRV 153
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDA--RSGKEIHGRMYRSGLELNSHVSNCLI 118
L FR M+ ++P+ TY G + C GD ++IH R G E + V N LI
Sbjct: 154 LGLFRRMLQEKVKPDERTYAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSLFVCNPLI 212
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
++Y K G L+SA+ VFD +R+S+SWV++LS Q G + +F SGV + +
Sbjct: 213 DLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPY 272
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+SVL AC + KVG Q+H LV K + +V L+ LY++ A +VF+ +
Sbjct: 273 IFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAM 332
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D ++++LI G +Q G + +A++LF KM L P VT + +L A + V + G+
Sbjct: 333 LQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGK 392
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q HS IK G SS + +LD Y KC ++ + + F + +VV WN ++ +
Sbjct: 393 QFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLD 452
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ E+ ++ M EG PN +TY +IL S + A++ G+Q H ++K GF NV + S
Sbjct: 453 NLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSS 512
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+DMYAK G+L+ A K+F L K++VSW M+ GYAQH EAL ++ MQ+ I
Sbjct: 513 VLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHS 572
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
++ F +SAC I + +G ++ G S + ++V L+A G+ R AY F
Sbjct: 573 DNIGFASAISACAGIQALNQG-QQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAY-F 630
Query: 539 IKSSPIEPNKVVWRCLLSG 557
+ + W L+SG
Sbjct: 631 AFDKIFSKDNISWNSLISG 649
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 149/528 (28%), Positives = 252/528 (47%), Gaps = 10/528 (1%)
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+N+ LM + N TY+ + C S G G ++HG++ + G + L++
Sbjct: 52 GINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMD 111
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y G L A VFD R W +L + L +F + V E +
Sbjct: 112 LYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERT 171
Query: 180 CASVLGACAVLGNLKVGM--QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
A VL C G++ +IH+ E FV LI+LY K L+ A +VF
Sbjct: 172 YAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDG 230
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+Q D +W A++ G +Q G EA+ LF +M +SG+ P+ FS VL A V+ G
Sbjct: 231 LQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVG 290
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
QLH L++K GFS T+V N ++ YS+ + + F+ M + D VS+N+LI+G
Sbjct: 291 EQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQ 350
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+ +A+EL K M + P+ T +++L+ S + A+ GKQ H +K G S++++
Sbjct: 351 GYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILE 410
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
AL+D+Y KC + A + F ++N+V WN MLV Y E+ +I++ MQ I+
Sbjct: 411 GALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIE 470
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
PN T+ +L C + V+ G +++ G + + ++ ++A G+ A +
Sbjct: 471 PNQFTYPSILRTCSSLRAVDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKLGKLDHALK 529
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
+ E + V W +++G H+ ++A L + +D H
Sbjct: 530 IFRRLK-EKDVVSWTAMIAGYAQHE-----KFAEALNLFKEMQDQGIH 571
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 136/571 (23%), Positives = 251/571 (43%), Gaps = 62/571 (10%)
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
F F LE N+ +L +Y +G+ L + GV + + +L C G
Sbjct: 27 FFFQKFLEHNT----ALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSG 82
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
G ++H + K + + L++LY LD A VF + + L+ W+ ++
Sbjct: 83 WFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLH 142
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG-------RQLHSLI 304
+ A + LF +M + P E T++ VL GG ++H+
Sbjct: 143 RFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCG------GGDVPFHCVEKIHART 196
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
I G+ + FV N ++D Y K L + K FD + + D VSW A+++G S EA+
Sbjct: 197 ITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAV 256
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
L M G P Y +S++L+ + + + G+Q H ++K GF + +ALV +Y
Sbjct: 257 LLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLY 316
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
++ G A +VF+ + ++ VS+N+++ G +Q G +ALE++ M + +KP+ T
Sbjct: 317 SRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVA 376
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP- 543
+LSAC +G + G + + I+ G+S + +++ L+ + A+EF S+
Sbjct: 377 SLLSACSSVGALLVGKQFHSYAIKA-GMSSDIILEGALLDLYVKCSDIKTAHEFFLSTET 435
Query: 544 ---------------------------------IEPNKVVWRCLLSGCKTHKDLVLGRYA 570
IEPN+ + +L C + + + LG
Sbjct: 436 ENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQI 495
Query: 571 AEKILSTDPE-DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMH 629
++L T + + +L ++YA+ D K+ + +KEK + SWT +
Sbjct: 496 HTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDV-----VSWTAM--IAG 548
Query: 630 YFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
Y +FA + ++L + M +H + G+
Sbjct: 549 YAQHEKFA--EALNLFKEMQDQGIHSDNIGF 577
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/664 (34%), Positives = 370/664 (55%), Gaps = 3/664 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEM-PERNVISWSALISGFSQIGMPEVA 60
+ +GF +V N L+ MY F ++DA+++FDE ERN +SW+ L+S + + A
Sbjct: 34 MATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDA 93
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F MV ++P + + V+AC + +G+++H + R G E + +N L++M
Sbjct: 94 IQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDM 153
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A +F+ + + +SW +L+S G +++ L + SG+ + F
Sbjct: 154 YVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFML 213
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L ACA G +G QIH + K + D ++ +GL+++YAK LD A +VF +
Sbjct: 214 SSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSH 273
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL W+ALI G + G+ EA +F + GL + T + VL + A ++ RQ+
Sbjct: 274 RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQV 333
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+L K+GF V N ++D Y KC L ++++ F+E D+++ ++I L+ C +
Sbjct: 334 HALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITA-LSQCDH 392
Query: 361 GE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
GE AI+L +ML +G P+ + S++LN + + A E GKQ H ++K F S+ G+A
Sbjct: 393 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA 452
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LV YAKCG + DA F L + +VSW+ M+ G AQHG G+ ALE++ M + I PN
Sbjct: 453 LVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPN 512
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
T VL AC H GLV+E YFNSM GI +H + ++ L G+ A E +
Sbjct: 513 HITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELV 572
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
S P + N VW LL + HKD LG+ AAEK+ +PE + H++L+N YA + MW+
Sbjct: 573 NSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWN 632
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
E AKVRK+MK+ ++KK+ SW E+++K+H F + +++ +++L + G
Sbjct: 633 EVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAG 692
Query: 660 YVPD 663
Y+P+
Sbjct: 693 YIPN 696
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 165/534 (30%), Positives = 270/534 (50%), Gaps = 28/534 (5%)
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD-ASLERNSISWVSLL 149
DA+ G ++H +G + V+N L+ MYG G + A+ VFD A ERN++SW L+
Sbjct: 22 DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 81
Query: 150 SSYC---QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
S+Y QCG+ +++F SG+ +EF + V+ AC N+ G Q+H++V +
Sbjct: 82 SAYVKNDQCGD---AIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRM 138
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
E D F A L+++Y K ++D+AS +F + D+ +W+ALI G G AI+L
Sbjct: 139 GYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELL 198
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
++M SSGL+P+ S +L A A GRQ+H +IK S ++ ++D Y+K
Sbjct: 199 LQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKN 258
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
L++++K FD M D++ WNALI+G + EA + + EG N T + +L
Sbjct: 259 HFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVL 318
Query: 387 NISSDIPAIEWGKQTHCCIVKPG--FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
++ + A +Q H K G FD++VV G L+D Y KC L+DA +VF+ SS +
Sbjct: 319 KSTASLEAASATRQVHALAEKIGFIFDAHVVNG--LIDSYWKCSCLSDAIRVFEECSSGD 376
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
+++ +M+ +Q G A++++ M ++P+ +L+AC + E+G
Sbjct: 377 IIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHA 436
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH--- 561
+I+ +S A +V+ +A G A E SS E V W ++ G H
Sbjct: 437 HLIKRQFMSDAFAGNA-LVYTYAKCGSIEDA-ELAFSSLPERGVVSWSAMIGGLAQHGHG 494
Query: 562 -KDLVL-GRYAAEKILSTDPEDTSAHIMLSNVYAEAN---MWDETAKVRKIMKE 610
+ L L GR E I +P HI +++V N + DE + MKE
Sbjct: 495 KRALELFGRMVDEGI---NPN----HITMTSVLCACNHAGLVDEAKRYFNSMKE 541
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 235/480 (48%), Gaps = 5/480 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ +V T N L+ MYVK R++ A +F++MP+ +V+SW+ALISG G A
Sbjct: 135 VVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRA 194
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M L PN + + ACA G G++IHG M ++ + + ++ L++M
Sbjct: 195 IELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 254
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K L A VFD R+ I W +L+S G H IF RK G+ ++ +
Sbjct: 255 YAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTL 314
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+VL + A L Q+H+L K FD V GLI+ Y KC L A RVF
Sbjct: 315 AAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSS 374
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ A +++I +Q AI LF++M GL P S +L A A + G+Q+
Sbjct: 375 GDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 434
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK F S F N ++ Y+KC +E++ F + E VVSW+A+I G H
Sbjct: 435 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 494
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
A+EL M+ EG PN T +++L + ++ K+ + + G D S
Sbjct: 495 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 554
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQENK 475
++D+ + G+L+DA ++ + + N W +L H LG+ A E +++ K
Sbjct: 555 MIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEK 614
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 40/280 (14%)
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M EG C N + +L +P + G Q H + GF S+V + +ALV MY G
Sbjct: 1 MRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 430 LNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
++DAR+VFD S +N VSWN ++ Y ++ +A++++ M + I+P + F V++
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 489 AC-----------VHIGLVEEGWH----YFNSMIRDHGISPRMDHIASVVH--------- 524
AC VH +V G+ N+++ + R+D IASV+
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVD-IASVIFEKMPDSDVV 176
Query: 525 -----LFAC--RGQTRRAYEFI---KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKI 574
+ C G RA E + KSS + PN + +L C LGR +
Sbjct: 177 SWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 236
Query: 575 LSTDPE-DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
+ + + D + L ++YA+ + D+ KV M + L
Sbjct: 237 IKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDL 276
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/638 (34%), Positives = 366/638 (57%), Gaps = 7/638 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ +Y+ F A+++F +M + ++++ LISG +Q G E AL F M L
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ T ++ACAS GD + GK++H + ++G+ + L+++Y KCG + +A +
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ N + W +L +Y Q + +IF + +G+ ++F+ +L C G +
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQI 362
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G QIHSL K E D +V+ LI++Y+K LD A ++ ++ D+ +W+++I GY
Sbjct: 363 ELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGY 422
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q EA+ F +M G+ P + + A A +K G Q+H+ + G+++
Sbjct: 423 VQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADI 482
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ NT+++ Y++C EE+ F E++ D ++WN LI+G S Y +A+ + M
Sbjct: 483 SIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQA 542
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G N++T+ + ++ +++ I+ GKQ H VK G S + +AL+ +Y KCG + DA
Sbjct: 543 GAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDA 602
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+ +F +S +N VSWNT++ +QHG G EAL+++ M++ +KPND TFIGVL+AC H+
Sbjct: 603 KMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHV 662
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLVEEG YF SM +G++P DH A VV + GQ RA F+ PI N ++WR
Sbjct: 663 GLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRT 722
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LLS CK HK++ +G AA+ +L +P D++++++LSN YA W +VRK+MK++ +
Sbjct: 723 LLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGI 782
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
+K+ G SW E++N +H F F G LH + +Q+
Sbjct: 783 RKEPGRSWIEVKNAVHAF-------FVGDRLHPLSDQI 813
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/560 (27%), Positives = 290/560 (51%), Gaps = 2/560 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G + + N L+ +Y K + A+++F E+ R+ +SW A++SG++Q G+ + A
Sbjct: 70 VVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAF 129
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M + P Y +SAC G+ IH ++Y+ + V N LI +Y
Sbjct: 130 RLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALY 189
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
G A+ VF L + +++ +L+S + QCG L+IF + SG+ + A
Sbjct: 190 LGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVA 249
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L ACA +G+L+ G Q+HS + K + FD L++LY KC ++ A +F+
Sbjct: 250 SLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRT 309
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+ ++ Y Q+ ++ ++F +M ++G+ P++ T+ +L + G Q+H
Sbjct: 310 NVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIH 369
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
SL IK GF S +V+ ++D YSK L+++ K + +++ DVVSW ++IAG++
Sbjct: 370 SLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCE 429
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA+ K+M G P+ ++ + + I A+ G Q H + G+ +++ I + LV
Sbjct: 430 EALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLV 489
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
++YA+CGR +A +F + K+ ++WN ++ G+ Q L ++AL ++ M + K N
Sbjct: 490 NLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVF 549
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TFI +SA ++ +++G ++ G + + +++ L+ G A + I S
Sbjct: 550 TFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDA-KMIFS 607
Query: 542 SPIEPNKVVWRCLLSGCKTH 561
N+V W +++ C H
Sbjct: 608 EMSLRNEVSWNTIITSCSQH 627
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/478 (31%), Positives = 242/478 (50%), Gaps = 5/478 (1%)
Query: 82 AVSACASRGDARS-GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
A+ AC RG+ EIH GL + + N LI++Y K GL+ A+ VF R
Sbjct: 48 ALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR 107
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
+ +SWV++LS Y Q G +++ + V + + +SVL AC G IH
Sbjct: 108 DHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIH 167
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
+ V+K A + FV LI LY LA RVF ++ D ++ LI G+AQ G
Sbjct: 168 AQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGE 227
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
A+ +F +M SGL P VT + +L A A V + G+QLHS ++K G S ++L
Sbjct: 228 CALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLL 287
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
D Y KC +E + F+ D +VV WN ++ + ++ E+ M G PN +
Sbjct: 288 DLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQF 347
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
TY IL + IE G+Q H +K GF+S++ + L+DMY+K G L+ ARK+ + L
Sbjct: 348 TYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEML 407
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+++VSW +M+ GY QH EAL + MQ+ + P++ SAC I + +G
Sbjct: 408 EKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGL 467
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE-PNKVVWRCLLSG 557
++ + G + + ++V+L+A G++ A+ + IE +++ W L+SG
Sbjct: 468 Q-IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFRE--IEHKDEITWNGLISG 522
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/520 (27%), Positives = 245/520 (47%), Gaps = 16/520 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + IT LL +YVK I A +F+ NV+ W+ ++ + QI +
Sbjct: 271 LLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKS 330
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M + PN +TY + C G G++IH ++G E + +VS LI+M
Sbjct: 331 FEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDM 390
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A+ + + +R+ +SW S+++ Y Q L F + GV
Sbjct: 391 YSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGL 450
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS ACA + ++ G+QIH+ V+ D + L+NLYA+C + + A +F I+
Sbjct: 451 ASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEH 510
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+ LI G+ Q +A+ +F+KM +G + TF + A A++ + G+Q+
Sbjct: 511 KDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQV 570
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +K G +S T VAN ++ Y KC +E++ F EM + VSWN +I
Sbjct: 571 HGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRG 630
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVV 415
EA++L M EG PN T+ +L S + +E G ++ + P D
Sbjct: 631 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYAC 690
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ VD+ + G+L+ AR+ D + + N + W T+L H + +EI + ++
Sbjct: 691 V----VDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVH----KNIEIGELAAKH 742
Query: 475 --KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
+++P+D+ +LS + M++D GI
Sbjct: 743 LLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGI 782
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/664 (34%), Positives = 370/664 (55%), Gaps = 3/664 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEM-PERNVISWSALISGFSQIGMPEVA 60
+ +GF +V N L+ MY F ++DA+++FDE ERN +SW+ L+S + + A
Sbjct: 127 MATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDA 186
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F MV ++P + + V+AC + +G+++H + R G E + +N L++M
Sbjct: 187 IQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDM 246
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A +F+ + + +SW +L+S G +++ L + SG+ + F
Sbjct: 247 YVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFML 306
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L ACA G +G QIH + K + D ++ +GL+++YAK LD A +VF +
Sbjct: 307 SSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSH 366
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL W+ALI G + G+ EA +F + GL + T + VL + A ++ RQ+
Sbjct: 367 RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQV 426
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+L K+GF V N ++D Y KC L ++++ F+E D+++ ++I L+ C +
Sbjct: 427 HALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITA-LSQCDH 485
Query: 361 GE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
GE AI+L +ML +G P+ + S++LN + + A E GKQ H ++K F S+ G+A
Sbjct: 486 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA 545
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LV YAKCG + DA F L + +VSW+ M+ G AQHG G+ ALE++ M + I PN
Sbjct: 546 LVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPN 605
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
T VL AC H GLV+E YFNSM GI +H + ++ L G+ A E +
Sbjct: 606 HITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELV 665
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
S P + N VW LL + HKD LG+ AAEK+ +PE + H++L+N YA + MW+
Sbjct: 666 NSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWN 725
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
E AKVRK+MK+ ++KK+ SW E+++K+H F + +++ +++L + G
Sbjct: 726 EVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAG 785
Query: 660 YVPD 663
Y+P+
Sbjct: 786 YIPN 789
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 196/630 (31%), Positives = 321/630 (50%), Gaps = 45/630 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF ++ NHL+ Y K R A+++FDE+P+ +SWS+L++ +S G+P A
Sbjct: 30 LLKSGFLASL--RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSA 87
Query: 61 LNYFRLM----VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
+ F M VCC N + + V C DA+ G ++H +G + V+N
Sbjct: 88 IQAFHGMRAEGVCC----NEFA-LPVVLKCVP--DAQLGAQVHAMAMATGFGSDVFVANA 140
Query: 117 LINMYGKCGLLSSAQFVFD-ASLERNSISWVSLLSSYC---QCGEHVHGLKIFLLSRKSG 172
L+ MYG G + A+ VFD A ERN++SW L+S+Y QCG+ +++F SG
Sbjct: 141 LVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGD---AIQVFGEMVWSG 197
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+ +EF + V+ AC N+ G Q+H++V + E D F A L+++Y K ++D+AS
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 257
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
+F + D+ +W+ALI G G AI+L ++M SSGL+P+ S +L A A
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 317
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
GRQ+H +IK S ++ ++D Y+K L++++K FD M D++ WNALI+
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 377
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG--F 410
G + EA + + EG N T + +L ++ + A +Q H K G F
Sbjct: 378 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 437
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
D++VV G L+D Y KC L+DA +VF+ SS ++++ +M+ +Q G A++++
Sbjct: 438 DAHVVNG--LIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFME 495
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA--SVVHLFAC 528
M ++P+ +L+AC + E+G +I+ +S D A ++V+ +A
Sbjct: 496 MLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS---DAFAGNALVYTYAK 552
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH----KDLVL-GRYAAEKILSTDPEDTS 583
G A E SS E V W ++ G H + L L GR E I +P
Sbjct: 553 CGSIEDA-ELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGI---NPN--- 605
Query: 584 AHIMLSNVYAEAN---MWDETAKVRKIMKE 610
HI +++V N + DE + MKE
Sbjct: 606 -HITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 235/480 (48%), Gaps = 5/480 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ +V T N L+ MYVK R++ A +F++MP+ +V+SW+ALISG G A
Sbjct: 228 VVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRA 287
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M L PN + + ACA G G++IHG M ++ + + ++ L++M
Sbjct: 288 IELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 347
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K L A VFD R+ I W +L+S G H IF RK G+ ++ +
Sbjct: 348 YAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTL 407
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+VL + A L Q+H+L K FD V GLI+ Y KC L A RVF
Sbjct: 408 AAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSS 467
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ A +++I +Q AI LF++M GL P S +L A A + G+Q+
Sbjct: 468 GDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 527
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK F S F N ++ Y+KC +E++ F + E VVSW+A+I G H
Sbjct: 528 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 587
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
A+EL M+ EG PN T +++L + ++ K+ + + G D S
Sbjct: 588 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 647
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQENK 475
++D+ + G+L+DA ++ + + N W +L H LG+ A E +++ K
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEK 707
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 172/375 (45%), Gaps = 42/375 (11%)
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
M S T S L +A + + G LH+ ++K GF + N ++ FYSKC + +
Sbjct: 1 MRSAGTISQQLTRYAAAQALLPGAHLHANLLKSGF--LASLRNHLISFYSKCRRPCCARR 58
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
FDE+ + VSW++L+ + + AI+ M EG C N + +L +P
Sbjct: 59 VFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPD 115
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLV 453
+ G Q H + GF S+V + +ALV MY G ++DAR+VFD S +N VSWN ++
Sbjct: 116 AQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMS 175
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC-----------VHIGLVEEGWH- 501
Y ++ +A++++ M + I+P + F V++AC VH +V G+
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEK 235
Query: 502 ---YFNSMIRDHGISPRMDHIASVVH--------------LFAC--RGQTRRAYEFI--- 539
N+++ + R+D IASV+ + C G RA E +
Sbjct: 236 DVFTANALVDMYVKMGRVD-IASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE-DTSAHIMLSNVYAEANMW 598
KSS + PN + +L C LGR ++ + + D + L ++YA+ +
Sbjct: 295 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354
Query: 599 DETAKVRKIMKEKSL 613
D+ KV M + L
Sbjct: 355 DDAMKVFDWMSHRDL 369
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/664 (35%), Positives = 373/664 (56%), Gaps = 1/664 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G ++ N LL YV F + DA KLFDEMP N +S+ L GFS+ + A
Sbjct: 29 ILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRA 88
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ E N + + + S A + +H +Y+ G + ++ V LI+
Sbjct: 89 RRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDA 148
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y CG + +A+ VFD ++ +SW +++ Y + H L +F R G + F+
Sbjct: 149 YSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTI 208
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++ L +C L KVG +H K + D +V + L+ LY K ++ A + F +
Sbjct: 209 SAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPK 268
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
DL WS +I YAQ K+ EA++LF +M SS ++P+ TF+ VL A A + G Q
Sbjct: 269 DDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQ 328
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+HS ++K+G S FV+N ++D Y+KC +E S+K F E + V+WN +I G++
Sbjct: 329 IHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGD 388
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A+ L +ML P TYS++L S+ + A+E G+Q H +K ++ + V+ ++
Sbjct: 389 GEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANS 448
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+DMYAKCGR++DAR FD + ++ VSWN ++ GY+ HGLG EAL ++ MMQ++ KPN
Sbjct: 449 LIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPN 508
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+GVLSAC + GL+++G +F SM++D+GI P ++H +V L GQ A + I
Sbjct: 509 KLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLI 568
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
P +P+ +VWR LL C HK+L LG+ A+++L +P+D + H++LSN+YA A WD
Sbjct: 569 GEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWD 628
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
A VRK MK+K +KK+ G SW E Q +HYF+ + + ++ L D G
Sbjct: 629 NVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAG 688
Query: 660 YVPD 663
YVPD
Sbjct: 689 YVPD 692
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 219/424 (51%), Gaps = 1/424 (0%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
++Y + D +GK +H + + G L+ N L+N Y G L A +FD
Sbjct: 4 HSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDE 63
Query: 137 SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
N++S+V+L + + + ++ L + G +++F ++L +
Sbjct: 64 MPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTC 123
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
+ +H+ V+K + D FV LI+ Y+ C +D A +VF I D+ +W+ ++ YA+
Sbjct: 124 LSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAEN 183
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
+++ LF +M G P+ T S L + ++ G+ +H +K+ + +V
Sbjct: 184 YCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVG 243
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG-H 375
+L+ Y+K + E+ + F+EM + D++ W+ +I+ + S EA+EL M
Sbjct: 244 IALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVV 303
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
PN +T++++L + + + G Q H C++K G DSNV + +AL+D+YAKCG + ++ K
Sbjct: 304 VPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVK 363
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+F + KN V+WNT++VGY Q G G +AL ++S M I+P + T+ VL A +
Sbjct: 364 LFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVA 423
Query: 496 VEEG 499
+E G
Sbjct: 424 LEPG 427
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/650 (34%), Positives = 376/650 (57%), Gaps = 6/650 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY+K +ND +++FDEM ERNV+SW++L++G+S G+ F M + PN
Sbjct: 134 LVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPN 193
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
YT ++A + G G ++H + + G E V N LI++Y + G+L A+ VFD
Sbjct: 194 RYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFD 253
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
R+ ++W S+++ Y + G+ + +IF + +GV + + ASV+ +CA L L +
Sbjct: 254 KMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELAL 313
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALIGGYA 254
+ K D+ V L+ +KC+++D A +FS ++ ++ +W+A+I G
Sbjct: 314 VKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCL 373
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q G +A++LF +M G+ P+ T+S +L V + ++H+ +IK + +
Sbjct: 374 QNGGNDQAVNLFSQMRREGVKPNHFTYSAIL----TVHYPVFVSEMHAEVIKTNYERSSS 429
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V +LD Y K +++K F+ ++ D+++W+A++AG+ + EA +L ++ EG
Sbjct: 430 VGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEG 489
Query: 375 HCPNLYTYSNILNI-SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN +T+S+++N +S A E GKQ H +K ++ + + SALV MYAK G ++ A
Sbjct: 490 IKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSA 549
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+VF ++LVSWN+M+ GY+QHG ++ALE++ MQ+ + + TFIGV++AC H
Sbjct: 550 HEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHA 609
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLVE+G YFNSMI DH I+P M H + ++ L++ G +A I P P VWR
Sbjct: 610 GLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRT 669
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL + H+++ LG AAEK++S PED++A+++LSN+YA A W E VRK+M ++ +
Sbjct: 670 LLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKV 729
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
KK+ G SW E++NK + F ++ +++LS+ L D GY PD
Sbjct: 730 KKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPD 779
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 161/540 (29%), Positives = 289/540 (53%), Gaps = 16/540 (2%)
Query: 29 AQKLFDEMPER--NVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSAC 86
A LFD++P R + + L+ +S+ + ALN F ++ L+P+ T + C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV 146
A D + G+++H + + GL + V L++MY K ++ + VFD ERN +SW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
SLL+ Y G + + ++F + GV + ++ ++V+ A G + +G+Q+H++V K
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
E V LI+LY++ L A VF +++ D W+++I GY + G+ E ++F
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIF 283
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
KM +G+ P+ +TF+ V+ + A ++E + + +K GF++ V ++ SKC
Sbjct: 284 NKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKC 343
Query: 327 ELLEESLKTFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
+ ++++L F M+E +VVSW A+I+G L + +A+ L M EG PN +TYS I
Sbjct: 344 KEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAI 403
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L + + + + H ++K ++ + +G+AL+D Y K G DA KVF+ + +K+L
Sbjct: 404 LTVHYPV----FVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDL 459
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
++W+ ML GYAQ G EA +++ + + IKPN+ TF V++AC E F++
Sbjct: 460 MAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHA 519
Query: 506 MIRDHGISPRMDHI----ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ I R+++ +++V ++A RG A+E K E + V W ++SG H
Sbjct: 520 ----YAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQK-ERDLVSWNSMISGYSQH 574
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 220/456 (48%), Gaps = 8/456 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + +N L+ +Y + + DA+ +FD+M R+ ++W+++I+G+ + G
Sbjct: 220 VVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEV 279
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M ++P + T+ + +CAS + K + + +SG + V L+
Sbjct: 280 FEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVA 339
Query: 121 YGKCGLLSSAQFVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
KC + A +F E +N +SW +++S Q G + + +F R+ GV + F+
Sbjct: 340 LSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFT 399
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+++L + ++H+ V K E V L++ Y K A +VF I+
Sbjct: 400 YSAILTVHYPV----FVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIE 455
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI-GGR 298
DL AWSA++ GYAQ G+ EA LF ++ G+ P+E TFS V+ A A G+
Sbjct: 456 AKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGK 515
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q H+ IKM ++ V++ ++ Y+K ++ + + F E D+VSWN++I+G+
Sbjct: 516 QFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHG 575
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIG 417
+A+E+ +M + T+ ++ + +E G++ ++ + +
Sbjct: 576 QAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHY 635
Query: 418 SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
S ++D+Y++ G L A + + + W T+L
Sbjct: 636 SCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLL 671
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/701 (33%), Positives = 368/701 (52%), Gaps = 36/701 (5%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G ++ N L+ Y KF + A+++F M R+V++WS++I+ ++ P A + F
Sbjct: 86 GVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTF 145
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M +EPN T++ + AC + G++IH + G+E + V+ LI MY KC
Sbjct: 146 ERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKC 205
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G +S A VF ERN +SW +++ + Q + +++ ++G++ + + S+L
Sbjct: 206 GEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLL 265
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+C L G +IHS + + LE D VA LI +Y KC + A +F + D+
Sbjct: 266 NSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVI 325
Query: 245 AWSALIGGYAQLG-KACEAID----LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+WSA+I GYAQ G K E+ID L +M G+ P++VTF +L A GRQ
Sbjct: 326 SWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQ 385
Query: 300 LHSLIIKMGF------------------------SSFTFVAN-------TVLDFYSKCEL 328
+H+ + K+GF F+ +AN + L Y KC
Sbjct: 386 IHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGD 445
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
L + K F EM +VVSWN +IAG+ + + ELL M EG P+ T IL
Sbjct: 446 LSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEA 505
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ +E GK H VK G +S+ V+ ++L+ MY+KCG++ +AR VFD +S+++ V+W
Sbjct: 506 CGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAW 565
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
N ML GY QHG G EA++++ M + ++ PN+ T V+SAC GLV+EG F M
Sbjct: 566 NAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQE 625
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
D ++PR H +V L G+ + A EFI+S P EP+ VW LL CK+H ++ L
Sbjct: 626 DFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAE 685
Query: 569 YAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKM 628
AA IL +P S +I LSN+YA+A WD++ KVR++M ++ LKKD G S E+ ++
Sbjct: 686 RAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRI 745
Query: 629 HYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
H F A + +H + L+ + + GY PD + H
Sbjct: 746 HTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLH 786
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 258/526 (49%), Gaps = 40/526 (7%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
N TY + CA GK +H ++ G+E++ ++ N LIN Y K ++SA+ VF
Sbjct: 55 NSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVF 114
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
R+ ++W S++++Y F + + + + S+L AC L+
Sbjct: 115 RRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILE 174
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G +IH++V +E D VA LI +Y+KC ++ +A VF + ++ +W+A+I A
Sbjct: 175 KGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANA 234
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q K EA +L+ +M +G+ P+ VTF +L + + GR++HS I + G +
Sbjct: 235 QHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMI 294
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH-----YGEAIELLKD 369
VAN ++ Y KC ++E+ + FD M + DV+SW+A+IAG+ S + E +LL+
Sbjct: 295 VANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLER 354
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD------------------ 411
M EG PN T+ +IL + A+E G+Q H + K GF+
Sbjct: 355 MRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGS 414
Query: 412 -------------SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
NVV ++ + MY KCG L+ A KVF + ++N+VSWN M+ GYAQ+
Sbjct: 415 IYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQN 474
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
G + E+ S M+ +P+ T I +L AC + +E G ++ G+
Sbjct: 475 GDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVK-LGLESDTVV 533
Query: 519 IASVVHLFACRGQTRRAYE-FIKSSPIEPNKVVWRCLLSGCKTHKD 563
S++ +++ GQ A F K S + V W +L+G H D
Sbjct: 534 ATSLIGMYSKCGQVAEARTVFDKMS--NRDTVAWNAMLAGYGQHGD 577
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 217/432 (50%), Gaps = 11/432 (2%)
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
C+ G +++ + ++ G+ ++ + V+ CA + G +H + + +E D
Sbjct: 32 CKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDI 91
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
++ LIN Y+K E + A +VF + L D+ WS++I YA +A D F +M +
Sbjct: 92 YLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDA 151
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
+ P+ +TF +L A + GR++H+++ MG + VA ++ YSKC + +
Sbjct: 152 NIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVA 211
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
+ F +M E +VVSW A+I + EA EL + ML G PN T+ ++LN +
Sbjct: 212 CEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTP 271
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
A+ G++ H I + G ++++++ +AL+ MY KC + +AR++FD +S ++++SW+ M+
Sbjct: 272 EALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMI 331
Query: 453 VGYAQHGLG-----REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
GYAQ G E ++ M+ + PN TF+ +L AC G +E+G ++ +
Sbjct: 332 AGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQG-RQIHAEL 390
Query: 508 RDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLG 567
G ++ +++A G A E + S N V W LS DL
Sbjct: 391 SKVGFELDRSLQTAIFNMYAKCGSIYEA-EQVFSKMANKNVVAWTSFLSMYIKCGDL--- 446
Query: 568 RYAAEKILSTDP 579
+AEK+ S P
Sbjct: 447 -SSAEKVFSEMP 457
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/668 (34%), Positives = 375/668 (56%), Gaps = 6/668 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQ---IG 55
++ +G ++ N L +Y K + ++ A LFD + + ++ +SW++LI+ FSQ
Sbjct: 37 ILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSS 96
Query: 56 MPEVALNYFR-LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
A++ FR +M + PN +T G SA ++ D +GK+ H ++G + +V
Sbjct: 97 SSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVG 156
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
+ L+NMY K G + A+ +FD ERN++SW +++S Y +++F L R+
Sbjct: 157 SSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEI 216
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+EF+ SVL A + G Q+HSL K L VA L+ +YAKC LD A R
Sbjct: 217 QNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRT 276
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F + WSA++ GYAQ G + +A+ LF KM SSG++PSE T V+ A +D+
Sbjct: 277 FEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAV 336
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
+ G+Q+HS K+GF +V + V+D Y+KC L ++ K F+ + + DVV W ++I G+
Sbjct: 337 VEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGY 396
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ + Y + L M E PN T +++L S + A++ GKQ H I+K GF V
Sbjct: 397 VQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEV 456
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
IGSAL MY KCG L+D +F + S++++SWN M+ G +Q+G G +ALE++ M
Sbjct: 457 PIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLE 516
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
IKP+ TF+ +LSAC H+GLV+ GW YF M + I+P ++H A +V + + G+
Sbjct: 517 GIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNE 576
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
A EFI+S+ ++ +WR LL CK H++ LG YA EK++ ++SA+++LS++Y
Sbjct: 577 AKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTA 636
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
+ +VR+IMK + + K+ GCSW EL+ +H F Q ++ + L+
Sbjct: 637 LGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLTKL 696
Query: 655 LFDGGYVP 662
+ D GY P
Sbjct: 697 MIDEGYQP 704
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 247/495 (49%), Gaps = 12/495 (2%)
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
+ P + + + C + G+ +H R+ ++G + +V+N +N+Y K LS A
Sbjct: 6 IFPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHA 65
Query: 131 QFVFDA--SLERNSISWVSLLSSYCQCGEHVHGLKIFLLS------RKSGVAISEFSCAS 182
+FD+ +++ +SW SL++++ Q H F +S R + V + + A
Sbjct: 66 LTLFDSINDNDKDDVSWNSLINAFSQ--NHSSSSSSFAISLFRRMMRANNVIPNAHTLAG 123
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
V A + L ++ G Q HS+ K D +V L+N+Y K + A ++F + +
Sbjct: 124 VFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERN 183
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+W+ +I GYA A +A+++F M + +E + VL A GRQ+HS
Sbjct: 184 TVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHS 243
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
L IK G + VAN ++ Y+KC L+++++TF+ + + ++W+A++ G+ +
Sbjct: 244 LAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDK 303
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A++L M G P+ +T ++N SD+ A+ GKQ H K GF + + SA+VD
Sbjct: 304 ALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVD 363
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MYAKCG L DARK F+ + ++V W +++ GY Q+G L +Y MQ ++ PN+ T
Sbjct: 364 MYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELT 423
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
VL AC + +++G +I+ +G + +++ ++ G Y
Sbjct: 424 MASVLRACSSLAALDQGKQMHARIIK-YGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRM 482
Query: 543 PIEPNKVVWRCLLSG 557
P + + W ++SG
Sbjct: 483 P-SRDVISWNAMISG 496
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/663 (31%), Positives = 370/663 (55%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G + + L+ ++ KF +++A ++F + ++ + ++ G+++ + A
Sbjct: 100 IIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDA 159
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+++F M + P Y + + C D R GKEIH ++ +G N ++NM
Sbjct: 160 VSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNM 219
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC L+ A +FD ER+ + W +++S Y Q G L++ L ++ G +
Sbjct: 220 YAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITI 279
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L A A +G+L++G IH + E V+ L+++Y+KC + A +F +
Sbjct: 280 VSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTG 339
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W+++I GY Q G A+++F KM + + VT L A AD+ + GR +
Sbjct: 340 KTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFV 399
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L+ ++ S V N+++ YSKC+ ++ + + F+ + +VSWNA+I G+ +
Sbjct: 400 HKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRI 459
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EAI+ M + P+ +T +++ +++ + K H +++ D NV + +AL
Sbjct: 460 NEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATAL 519
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAKCG ++ ARK+FD + +++ +WN M+ GY HGLG+ ALE++ M++ IKPN+
Sbjct: 520 VDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNE 579
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ VLSAC H GLVEEG+ YF SM +D+G+ P MDH ++V L + A++FI+
Sbjct: 580 VTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQ 639
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
PIEP V+ +L C+ HK++ LG AA +I DP+D H++L+N+YA A+MWD+
Sbjct: 640 KMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDK 699
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
A+VR M++K ++K G S ELQN++H F + + Q ++ + L + GY
Sbjct: 700 VARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGY 759
Query: 661 VPD 663
+PD
Sbjct: 760 MPD 762
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 169/302 (55%)
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q L+ K L + L++L+ K L A+RVF I+ + ++ GYA+
Sbjct: 95 QFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNS 154
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+A+ F +M G+ P F+Y+L D + G+++H +I GF+S F
Sbjct: 155 SLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMT 214
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
V++ Y+KC L+EE+ K FD M E D+V WN +I+G+ + A+EL+ M EG P
Sbjct: 215 GVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRP 274
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ T +IL +D+ ++ G+ H ++ GF+S V + +ALVDMY+KCG + AR +F
Sbjct: 275 DSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIF 334
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D ++ K +VSWN+M+ GY Q+G A+EI+ M + +++ + T +G L AC +G VE
Sbjct: 335 DRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVE 394
Query: 498 EG 499
+G
Sbjct: 395 QG 396
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/651 (33%), Positives = 371/651 (56%), Gaps = 7/651 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GFH N L+ +Y + ++ A+++F M R+ +S+++LISG Q G + A
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M L+P+ T +SACAS G G ++H ++G+ + + L+++
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDL 406
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + +A F + N + W +L +Y Q +IF + G+ ++F+
Sbjct: 407 YSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTY 466
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L C LG L +G QIH+ V K + + +V LI++YAK +L LA R+ +
Sbjct: 467 PSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPE 526
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+A+I GY Q EA+ LF +M G+ + F+ + A A ++ G+Q+
Sbjct: 527 DDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQI 586
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ GF + + N ++ Y++C ++E+ F+++ + + +SWN+L++G S ++
Sbjct: 587 HAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYF 646
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+++ ML N++TY + ++ ++ + I+ G+Q H ++K G+DS + ++L
Sbjct: 647 EEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSL 706
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ +YAK G ++DA + F+ +S +N++SWN M+ GY+QHG G EAL ++ M+ I PN
Sbjct: 707 ISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNH 766
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+GVLSAC HIGLV+EG YF SM + H + P+ +H VV L GQ RA E+IK
Sbjct: 767 VTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIK 826
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
PI + ++WR LLS C HK++ +G AA +L +PED++ ++++SN+YA + W
Sbjct: 827 EMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIH 886
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
RK+MK++ +KK+ G SW E++N +H F + G LH + NQ+
Sbjct: 887 RDWSRKLMKDRGVKKEPGRSWIEVKNAVHAF-------YAGDKLHPLTNQI 930
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/556 (30%), Positives = 285/556 (51%), Gaps = 5/556 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SGF + + L+ Y + + A K+FDE R+V SW+ +I F
Sbjct: 87 SGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCL 146
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSG--KEIHGRMYRSGLELNSHVSNCLINMY 121
FR M+ + PN YT+ G + AC GD K++H R + G + + V+N LI++Y
Sbjct: 147 FRRMLAEGITPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLY 205
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G + SA+ VF+ ++ ++WV+++S Q G + +F S + + + +
Sbjct: 206 SKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLS 265
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SVL A + ++G Q+H LV K + +V GL+ LY++ KL A R+FS +
Sbjct: 266 SVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSR 325
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D ++++LI G Q G + A++LF KM L P +T + +L A A V G QLH
Sbjct: 326 DGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLH 385
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
S IK G S+ + ++LD YSKC +E + K F + ++V WN ++ + +
Sbjct: 386 SHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLS 445
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
++ E+ + M EG PN +TY +IL + + A+ G+Q H ++K GF NV + S L+
Sbjct: 446 DSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLI 505
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAK G+L A ++ L ++VSW M+ GY QH + EAL+++ M+ I+ ++
Sbjct: 506 DMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNI 565
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
F +SAC I + +G ++ G + +++ L+A G+ + AY +
Sbjct: 566 GFASAISACAGIRALRQG-QQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEK 624
Query: 542 SPIEPNKVVWRCLLSG 557
+ N + W L+SG
Sbjct: 625 IG-DKNNISWNSLVSG 639
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 157/558 (28%), Positives = 292/558 (52%), Gaps = 4/558 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + + N L+ +Y K I A+K+F+ + +++++W A+ISG SQ G+ E A+ F
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M + P Y +SA G+++H + + G ++V N L+ +Y +
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L SA+ +F R+ +S+ SL+S Q G L++F ++ + + AS+L
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA +G L GMQ+HS K + D + L++LY+KC ++ A + F + ++
Sbjct: 370 SACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIV 429
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+ ++ Y QL ++ ++F +M G++P++ T+ +L + G Q+H+ +
Sbjct: 430 LWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHV 489
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK GF +V + ++D Y+K L +L+ + E DVVSW A+IAG++ + EA+
Sbjct: 490 IKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEAL 549
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L ++M + G + +++ ++ + I A+ G+Q H GF +++ I +AL+ +Y
Sbjct: 550 QLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLY 609
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
A+CGR+ +A F+ + KN +SWN+++ G AQ G EAL+++ M + + N T+
Sbjct: 610 ARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYG 669
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY-EFIKSSP 543
+SA + +++G +SM+ G + S++ L+A G A+ EF S
Sbjct: 670 SAISAAASLANIKQG-QQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS- 727
Query: 544 IEPNKVVWRCLLSGCKTH 561
E N + W +++G H
Sbjct: 728 -ERNVISWNAMITGYSQH 744
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 241/496 (48%), Gaps = 13/496 (2%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ NY Y+ + C + G +H R+ +SG + + + L++ Y + G A
Sbjct: 54 VRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAV 113
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD + R+ SW ++ + + +F G+ + ++ A VL AC V G
Sbjct: 114 KVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKAC-VGG 172
Query: 192 NLKVGM--QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
++ Q+HS F + VA LI+LY+K ++ A +VF+ I + D+ W A+
Sbjct: 173 DIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAM 232
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I G +Q G EAI LF M +S + P+ S VL A ++ G QLH L+IK GF
Sbjct: 233 ISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGF 292
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
S T+V N ++ YS+ L + + F M+ D VS+N+LI+G + A+EL
Sbjct: 293 HSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTK 352
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M + P+ T +++L+ + + A+ G Q H +K G +++++ +L+D+Y+KC
Sbjct: 353 MQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCAD 412
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ A K F ++N+V WN MLV Y Q ++ EI+ MQ + PN T+ +L
Sbjct: 413 VETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRT 472
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMD---HIASV-VHLFACRGQTRRAYEFIKSSPIE 545
C +G + Y I H I ++ SV + ++A GQ A ++ P E
Sbjct: 473 CTSLGAL-----YLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-E 526
Query: 546 PNKVVWRCLLSGCKTH 561
+ V W +++G H
Sbjct: 527 DDVVSWTAMIAGYVQH 542
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/668 (33%), Positives = 370/668 (55%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G ++ + L+ +Y K + A+++F MP++N +SW+AL++GF+Q+G E L
Sbjct: 256 IKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVL 315
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
N F M + + +T + CA+ G+ R+G+ +H R G EL+ +S CL++MY
Sbjct: 316 NLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMY 375
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCGL A VF + + +SW ++++ Q G+ ++F R SGV ++F+ A
Sbjct: 376 SKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLA 435
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S++ A LG+L G IH+ V K E+D V L+ +Y K + RVF
Sbjct: 436 SLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNR 495
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
DL +W+AL+ G+ + +F +M + G P+ TF +L + + + + G+Q+H
Sbjct: 496 DLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVH 555
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ I+K FV ++D Y+K LE++ F+ + + D+ +W ++AG+
Sbjct: 556 AQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGE 615
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A++ M EG PN +T ++ L+ S I ++ G+Q H +K G ++ + SALV
Sbjct: 616 KAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALV 675
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAKCG + DA VFD L S++ VSWNT++ GY+QHG G +AL+ + M + P++
Sbjct: 676 DMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEV 735
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TFIGVLSAC H+GL+EEG +FNS+ + +GI+P ++H A +V + G+ FI+
Sbjct: 736 TFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEE 795
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
+ N ++W +L CK H ++ G AA K+ +PE S +I+LSN++A MWD+
Sbjct: 796 MKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDV 855
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
VR +M + +KK+ GCSW E+ ++H F + + + ++H + L L GY
Sbjct: 856 TNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYT 915
Query: 662 PDPIYSSH 669
P+ + H
Sbjct: 916 PNTDHVLH 923
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/561 (33%), Positives = 308/561 (54%), Gaps = 2/561 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG +P+ +N L+ +Y K N A K+F E+PER+V+SW+ALI+GF G A
Sbjct: 154 VIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGA 213
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+N F M +E N +TY A+ AC+ D GK++H + G + V + L+++
Sbjct: 214 VNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDL 273
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A+ VF ++N++SW +LL+ + Q G+ L +F S + S+F+
Sbjct: 274 YAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTL 333
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++VL CA GNL+ G +HSL + E D+F++ L+++Y+KC A +VF I+
Sbjct: 334 STVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIED 393
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
PD+ +WSA+I Q G++ EA ++F +M SG++P++ T + ++ A D+ + G +
Sbjct: 394 PDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESI 453
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ + K GF V N ++ Y K +++ + F+ D++SWNAL++G +
Sbjct: 454 HACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETC 513
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ + ML EG PN+YT+ +IL S + ++ GKQ H IVK D N +G+AL
Sbjct: 514 DTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTAL 573
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAK L DA +F+ L ++L +W ++ GYAQ G G +A++ + MQ +KPN+
Sbjct: 574 VDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNE 633
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
T LS C I ++ G +SM G S M +++V ++A G A E +
Sbjct: 634 FTLASSLSGCSRIATLDSG-RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA-EVVF 691
Query: 541 SSPIEPNKVVWRCLLSGCKTH 561
+ + V W ++ G H
Sbjct: 692 DGLVSRDTVSWNTIICGYSQH 712
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 247/431 (57%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y G + CAS+GD GK IHG++ +SG+ +SH+ N L+N+Y KCG + A VF
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
ER+ +SW +L++ + G + +F R+ GV +EF+ A+ L AC++ +L+ G Q
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H+ K D FV L++LYAKC ++ LA RVF + + +W+AL+ G+AQ+G
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
A + ++LF +M S + S+ T S VL A+ G+ +HSL I++G F++
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCC 370
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
++D YSKC L ++LK F +++ DVVSW+A+I EA E+ K M G PN
Sbjct: 371 LVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPN 430
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
+T +++++ ++D+ + +G+ H C+ K GF+ + + +ALV MY K G + D +VF+
Sbjct: 431 QFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFE 490
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
++++L+SWN +L G+ + L I++ M PN TFI +L +C + V+
Sbjct: 491 ATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDL 550
Query: 499 GWHYFNSMIRD 509
G ++++
Sbjct: 551 GKQVHAQIVKN 561
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
L YS +L + + GK H ++K G + + + ++LV++YAKCG N A KVF
Sbjct: 128 LRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFG 187
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+ +++VSW ++ G+ G G A+ ++ M+ ++ N+ T+ L AC +E
Sbjct: 188 EIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEF 247
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
G I+ S +++V L+A G+ A P + N V W LL+G
Sbjct: 248 GKQVHAEAIKVGDFSDLFVG-SALVDLYAKCGEMVLAERVFLCMP-KQNAVSWNALLNGF 305
Query: 559 KTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
D AEK+L+ T + I S
Sbjct: 306 AQMGD-------AEKVLNLFCRMTGSEINFS 329
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/666 (33%), Positives = 368/666 (55%), Gaps = 3/666 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G +V N L+ MY KF ++ A K+F MP RN++SW+++ISGFS+ G +
Sbjct: 57 VIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDC 116
Query: 61 LNYFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
+ M+ L P+ T V + CA D + G IHG + GL + V+N L+
Sbjct: 117 FDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLV 176
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISE 177
+MY KCG L+ AQ +FD + +N++SW +++ C G +F + + + ++E
Sbjct: 177 DMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNE 236
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ ++L AC + L+ ++H + ++D+ VA G + YAKC L A RVF +
Sbjct: 237 VTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYS 296
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
++ + +W+ALIGG AQ G +A++L+++M SGL+P T +L A A +K G
Sbjct: 297 METKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYG 356
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+++H +++ G +F+ ++L Y C + FD M+E VSWNA+I+G+ +
Sbjct: 357 KEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQN 416
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+A+ L + ++ +G P+ ++L S A+ GK+THC +K +V +
Sbjct: 417 GLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVA 476
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ +DMYAK G + ++R VFD L +K+L SWN ++ Y HG G E++E++ M++
Sbjct: 477 CSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQM 536
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ TFIG+L+ C H GLVEEG YFN M HGI P+++H A V+ + G+ A
Sbjct: 537 PDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALR 596
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
+ P +P+ VW LLS C+ +L +G+ AEK+L +P++ ++ LSN+YA +
Sbjct: 597 LVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGR 656
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
WD+ +VR+++K+ L+KD GCSW EL K+H F Q ++ +L +
Sbjct: 657 WDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCK 716
Query: 658 GGYVPD 663
GY P+
Sbjct: 717 IGYKPN 722
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 226/431 (52%), Gaps = 3/431 (0%)
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+ +L+ + +T+ + AC D G+ IHG + + GL L+ V N LI MYG
Sbjct: 18 FVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYG 77
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG--EHVHGLKIFLLSRKSGVAISEFSC 180
K G + +A VF RN +SW S++S + + G + + + +++ + G+ +
Sbjct: 78 KFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATL 137
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL CA ++++G++IH L K L D V L+++Y+KC L A +F
Sbjct: 138 VTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNR 197
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+ +IGG G EA +LF +M + +EVT +L A ++ + ++
Sbjct: 198 KNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKE 257
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH I+ GF VAN + Y+KC +L + + F M+ V SWNALI G +
Sbjct: 258 LHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGD 317
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A+ L M + G P+ +T ++L S+ + ++ +GK+ H +++ G + + IG +
Sbjct: 318 PRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGIS 377
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+ +Y CG + AR +FD + K+ VSWN M+ GY+Q+GL +AL ++ + + +P+
Sbjct: 378 LLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPS 437
Query: 480 DNTFIGVLSAC 490
D + VL AC
Sbjct: 438 DIAVVSVLGAC 448
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/655 (33%), Positives = 365/655 (55%), Gaps = 29/655 (4%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G+ +V++ + LL MY K R++++ +F MP++N ISWSA+I+G Q + L F
Sbjct: 211 GYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMF 270
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M + + Y + +CA+ D R G ++H +S + V ++MY KC
Sbjct: 271 KEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKC 330
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ AQ +FD S N S+ ++++ Y Q L +F KS + E S + L
Sbjct: 331 NNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGAL 390
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA + L G+Q+H L K + VA I++Y KCE LD A RVF + D
Sbjct: 391 RACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAV 450
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+A+I + Q + + +++ V M SG+ P E TF VL A A G ++H+ I
Sbjct: 451 SWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTI 509
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM----------DEHD----------- 343
+K+G +S ++ ++++D YSKC +++E+ K +++ EH
Sbjct: 510 VKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQD 569
Query: 344 ------VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
+VSWNA+I+G++ +A M+ G P+ +TYS +L+ +++ +I
Sbjct: 570 RRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGL 629
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
GKQ H ++K +V I S LVDMY+KCG L+D+R +F+ ++ V+WN M+ GYA
Sbjct: 630 GKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAH 689
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
HG+G EA++++ M I PN TF+ +L AC H+GLVE G YF+ M +++G+ PR++
Sbjct: 690 HGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLE 749
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK-DLVLGRYAAEKILS 576
H +++V + G+ +A E I+ P E + V+WR LLS CK ++ ++ AA +L
Sbjct: 750 HYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLR 809
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
DP+D+S +I+LSN+YA+A MWD+ +++R M+ LKK+ GCSW E++++ H F
Sbjct: 810 LDPQDSSTYILLSNIYADAGMWDKASELRTAMRSDKLKKEPGCSWVEIRDEFHTF 864
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 189/623 (30%), Positives = 294/623 (47%), Gaps = 69/623 (11%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALI------------ 48
MI SGF P V N LL +Y+ + A KLFD MP R+V+SW+A+I
Sbjct: 75 MIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRA 134
Query: 49 -------------------SGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASR 89
SGF Q G ++ F M +E + ++ + C+
Sbjct: 135 SLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSIL 194
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
+ + G +IHG R G + + + L++MY KC L + VF A ++N ISW +++
Sbjct: 195 ENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAII 254
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ Q GLK+F +K GV +S+ ASVL +CA L +L++G Q+H+ K
Sbjct: 255 AGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFV 314
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
D V +++YAKC + A R+F + +L +++A+I GY+Q A+ LF K+
Sbjct: 315 KDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKL 374
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
S L E++ S L A A VK G QLH L K FS VAN +D Y KCE L
Sbjct: 375 SKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEAL 434
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
+E+ + FDEM D VSWNA+IA H + + + +L ML G P+ YT+ ++L
Sbjct: 435 DEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKAC 494
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF------------ 437
+ ++ G + H IVK G SN IGS+LVDMY+KCG +++A K+
Sbjct: 495 AG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNT 553
Query: 438 ---------------DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
D + +VSWN ++ GY +A ++ M E I P+ T
Sbjct: 554 YSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFT 613
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH----IASVVHLFACRGQTRRAYEF 538
+ VL C ++ + G I H I + + +++V +++ G +
Sbjct: 614 YSTVLDTCANLASIGLG-----KQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLM 668
Query: 539 IKSSPIEPNKVVWRCLLSGCKTH 561
+ +PI + V W ++ G H
Sbjct: 669 FEKAPIR-DFVTWNAMICGYAHH 690
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 211/436 (48%), Gaps = 31/436 (7%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD---------- 135
CA + GK+ H M SG VSNCL+ +Y CG L A +FD
Sbjct: 59 CAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSW 118
Query: 136 ---------------ASL------ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
ASL R+ +SW S+LS + Q GE++ +K+F+ +SGV
Sbjct: 119 NAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVE 178
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
S + +L C++L N K+G QIH + + + D L+++YAKC++LD + V
Sbjct: 179 FDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTV 238
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F + + +WSA+I G Q + +F +M G+ S+ ++ VL + A + +
Sbjct: 239 FYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDL 298
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G QLH+ +K F V LD Y+KC ++++ + FD + ++ S+NA+I G+
Sbjct: 299 RLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGY 358
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ A+ L + + + + S L + + + G Q H K F N+
Sbjct: 359 SQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNI 418
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +A +DMY KC L++A +VFD + K+ VSWN ++ + Q+ + L I M +
Sbjct: 419 CVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRS 478
Query: 475 KIKPNDNTFIGVLSAC 490
++P++ TF VL AC
Sbjct: 479 GMEPDEYTFGSVLKAC 494
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 179/361 (49%), Gaps = 33/361 (9%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
K +++ FS V CA ++G Q H+ + FV+ L+ LY C L
Sbjct: 44 KPATSVANFSF--VFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLG 101
Query: 230 LASRVFSNIQLPDLTAWSALIGGYA-------------------------------QLGK 258
A+++F + L D+ +W+A+I GYA Q G+
Sbjct: 102 YATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGE 161
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
E++ +F++M SG+ +FS +L + ++ G Q+H + ++MG+ + +
Sbjct: 162 NLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSA 221
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+LD Y+KC+ L+ES F M + + +SW+A+IAG + + +++ K+M G +
Sbjct: 222 LLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVS 281
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
Y+++L + +P + G Q H +K F + ++ +A +DMYAKC + DA+++FD
Sbjct: 282 QSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFD 341
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+ NL S+N M+ GY+Q G AL ++ + ++ + ++ + G L AC + + E
Sbjct: 342 MSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSE 401
Query: 499 G 499
G
Sbjct: 402 G 402
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 45/202 (22%)
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
A E GKQ H ++ GF V + + L+ +Y CG L A K+FD + +++VSWN M+
Sbjct: 64 AHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIF 123
Query: 454 GYA-------------------------------QHGLGREALEIYSMMQENKIKPNDNT 482
GYA Q G E+++++ M + ++ ++ +
Sbjct: 124 GYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKS 183
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV------HLFACRGQTRRAY 536
F +L C + + G + HGI+ RM + VV ++A + ++
Sbjct: 184 FSVILKVCSILENYKLG-------TQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESF 236
Query: 537 EFIKSSPIEPNKVVWRCLLSGC 558
+ P + N + W +++GC
Sbjct: 237 TVFYAMP-QKNWISWSAIIAGC 257
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/651 (33%), Positives = 370/651 (56%), Gaps = 7/651 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GFH N L+ +Y + ++ A+++F M R+ +S+++LISG Q G + A
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M L+P+ T +SACAS G G ++H ++G+ + + L+++
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDL 406
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + +A F + N + W +L +Y Q +IF + G+ ++F+
Sbjct: 407 YSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTY 466
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L C LG L +G QIH+ V K + + +V LI++YAK +L LA R+ +
Sbjct: 467 PSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPE 526
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+A+I GY Q EA+ LF +M G+ + F+ + A A ++ G+Q+
Sbjct: 527 DDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQI 586
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ GF + + N ++ Y++C ++E+ F+++ + + +SWN+L++G S ++
Sbjct: 587 HAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYF 646
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+++ ML N++TY + ++ ++ + I+ G+Q H ++K G+DS + ++L
Sbjct: 647 EEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSL 706
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ +YAK G ++DA + F+ +S +N++SWN M+ GY+QHG G EAL ++ M+ I PN
Sbjct: 707 ISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNH 766
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+GVLSAC HIGLV+EG YF SM + H + P+ +H VV L GQ RA E+IK
Sbjct: 767 VTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIK 826
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
PI + ++WR LLS C HK++ +G AA +L +PED++ ++++SN+YA + W
Sbjct: 827 EMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIH 886
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
RK+MK+ +KK+ G SW E++N +H F + G LH + NQ+
Sbjct: 887 RDWSRKLMKDXGVKKEPGRSWIEVKNAVHAF-------YAGDKLHPLTNQI 930
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/556 (30%), Positives = 285/556 (51%), Gaps = 5/556 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SGF + + L+ Y + + A K+FDE R+V SW+ +I F
Sbjct: 87 SGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCL 146
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSG--KEIHGRMYRSGLELNSHVSNCLINMY 121
FR M+ + PN YT+ G + AC GD K++H R + G + + V+N LI++Y
Sbjct: 147 FRRMLAEGITPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLY 205
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G + SA+ VF+ ++ ++WV+++S Q G + +F S + + + +
Sbjct: 206 SKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLS 265
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SVL A + ++G Q+H LV K + +V GL+ LY++ KL A R+FS +
Sbjct: 266 SVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSR 325
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D ++++LI G Q G + A++LF KM L P +T + +L A A V G QLH
Sbjct: 326 DGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLH 385
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
S IK G S+ + ++LD YSKC +E + K F + ++V WN ++ + +
Sbjct: 386 SHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLS 445
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
++ E+ + M EG PN +TY +IL + + A+ G+Q H ++K GF NV + S L+
Sbjct: 446 DSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLI 505
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAK G+L A ++ L ++VSW M+ GY QH + EAL+++ M+ I+ ++
Sbjct: 506 DMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNI 565
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
F +SAC I + +G ++ G + +++ L+A G+ + AY +
Sbjct: 566 GFASAISACAGIRALRQG-QQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEK 624
Query: 542 SPIEPNKVVWRCLLSG 557
+ N + W L+SG
Sbjct: 625 IG-DKNNISWNSLVSG 639
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 157/558 (28%), Positives = 292/558 (52%), Gaps = 4/558 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + + N L+ +Y K I A+K+F+ + +++++W A+ISG SQ G+ E A+ F
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M + P Y +SA G+++H + + G ++V N L+ +Y +
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L SA+ +F R+ +S+ SL+S Q G L++F ++ + + AS+L
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA +G L GMQ+HS K + D + L++LY+KC ++ A + F + ++
Sbjct: 370 SACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIV 429
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+ ++ Y QL ++ ++F +M G++P++ T+ +L + G Q+H+ +
Sbjct: 430 LWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHV 489
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK GF +V + ++D Y+K L +L+ + E DVVSW A+IAG++ + EA+
Sbjct: 490 IKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEAL 549
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L ++M + G + +++ ++ + I A+ G+Q H GF +++ I +AL+ +Y
Sbjct: 550 QLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLY 609
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
A+CGR+ +A F+ + KN +SWN+++ G AQ G EAL+++ M + + N T+
Sbjct: 610 ARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYG 669
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY-EFIKSSP 543
+SA + +++G +SM+ G + S++ L+A G A+ EF S
Sbjct: 670 SAISAAASLANIKQG-QQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS- 727
Query: 544 IEPNKVVWRCLLSGCKTH 561
E N + W +++G H
Sbjct: 728 -ERNVISWNAMITGYSQH 744
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 241/496 (48%), Gaps = 13/496 (2%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ NY Y+ + C + G +H R+ +SG + + + L++ Y + G A
Sbjct: 54 VRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAV 113
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD + R+ SW ++ + + +F G+ + ++ A VL AC V G
Sbjct: 114 KVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKAC-VGG 172
Query: 192 NLKVGM--QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
++ Q+HS F + VA LI+LY+K ++ A +VF+ I + D+ W A+
Sbjct: 173 DIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAM 232
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I G +Q G EAI LF M +S + P+ S VL A ++ G QLH L+IK GF
Sbjct: 233 ISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGF 292
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
S T+V N ++ YS+ L + + F M+ D VS+N+LI+G + A+EL
Sbjct: 293 HSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTK 352
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M + P+ T +++L+ + + A+ G Q H +K G +++++ +L+D+Y+KC
Sbjct: 353 MQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCAD 412
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ A K F ++N+V WN MLV Y Q ++ EI+ MQ + PN T+ +L
Sbjct: 413 VETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRT 472
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMD---HIASV-VHLFACRGQTRRAYEFIKSSPIE 545
C +G + Y I H I ++ SV + ++A GQ A ++ P E
Sbjct: 473 CTSLGAL-----YLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-E 526
Query: 546 PNKVVWRCLLSGCKTH 561
+ V W +++G H
Sbjct: 527 DDVVSWTAMIAGYVQH 542
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/658 (32%), Positives = 380/658 (57%), Gaps = 6/658 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ MY K + D +++FDEM +R+V+SW++L++G+S + F LM
Sbjct: 141 NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYR 200
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+YYT ++A A++G G +IH + + G E V N LI+M K G+L A+ V
Sbjct: 201 PDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVV 260
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD ++S+SW S+++ + G+ + + F + +G + + ASV+ +CA L L
Sbjct: 261 FDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKEL 320
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-LPDLTAWSALIGG 252
+ +H K L ++ V L+ KC+++D A +FS + + + +W+A+I G
Sbjct: 321 GLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISG 380
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y Q G +A++LF M G+ P+ T+S +L V+ + ++H+ +IK +
Sbjct: 381 YLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL----TVQHAVFISEIHAEVIKTNYEKS 436
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+ V +LD + K + +++K F+ ++ DV++W+A++AG+ + EA ++ +
Sbjct: 437 SSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTR 496
Query: 373 EGHCPNLYTYSNILNI-SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
EG PN +T+ +I+N ++ ++E GKQ H +K ++ + + S+LV +YAK G +
Sbjct: 497 EGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIE 556
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
A ++F ++LVSWN+M+ GYAQHG ++ALE++ MQ+ ++ + TFIGV+SAC
Sbjct: 557 SAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACA 616
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
H GLV +G +YFN MI DH I+P M+H + ++ L++ G +A + I P P VW
Sbjct: 617 HAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVW 676
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
R +L+ + H+++ LG+ AAEKI+S +P+ ++A+++LSN+YA A W E VRK+M ++
Sbjct: 677 RIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKR 736
Query: 612 SLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+KK+ G SW E++NK + F + ++ +++L+ L D GY PD Y H
Sbjct: 737 RVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFH 794
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 298/565 (52%), Gaps = 20/565 (3%)
Query: 7 HPNVITYNHLLLMYVK-FSRIND---AQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
H N + +H++ + + R +D AQ+LFD+ P R++ + L+ +S+ + AL+
Sbjct: 29 HANPLLQSHVVALNARTLLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALH 88
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F + L P+ YT +S CA + G+++H + + GL + V N L++MY
Sbjct: 89 LFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYT 148
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
K G + + VFD +R+ +SW SLL+ Y + ++F L + G ++ ++
Sbjct: 149 KTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVST 208
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
V+ A A G + +GMQIH+LV K E ++ V LI++ +K L A VF N++ D
Sbjct: 209 VIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKD 268
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+W+++I G+ G+ EA + F M +G P+ TF+ V+ + A +KE R LH
Sbjct: 269 SVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHC 328
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSWNALIAGHLASCHYG 361
+K G S+ V ++ +KC+ ++++ F M VVSW A+I+G+L +
Sbjct: 329 KTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTD 388
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A+ L M EG PN +TYS IL + + + + H ++K ++ + +G+AL+
Sbjct: 389 QAVNLFSLMRREGVKPNHFTYSTILTVQHAV----FISEIHAEVIKTNYEKSSSVGTALL 444
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
D + K G ++DA KVF+ + +K++++W+ ML GYAQ G EA +I+ + IKPN+
Sbjct: 445 DAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEF 504
Query: 482 TFIGVLSACVH-IGLVEEGWHYFNSMIRDHGISPRMDHI----ASVVHLFACRGQTRRAY 536
TF +++AC VE+G + + I R+++ +S+V L+A RG A+
Sbjct: 505 TFCSIINACTAPTASVEQGKQF-----HAYAIKLRLNNALCVSSSLVTLYAKRGNIESAH 559
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTH 561
E K E + V W ++SG H
Sbjct: 560 EIFKRQK-ERDLVSWNSMISGYAQH 583
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 215/441 (48%), Gaps = 7/441 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + N L+ M K + DA+ +FD M ++ +SW+++I+G G A
Sbjct: 229 VVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEA 288
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M +P + T+ + +CAS + + +H + +SGL N +V L+
Sbjct: 289 FETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVA 348
Query: 121 YGKCGLLSSAQFVFDASLERNS-ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
KC + A +F S +SW +++S Y Q G+ + +F L R+ GV + F+
Sbjct: 349 LTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFT 408
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+++L + + +IH+ V K E V L++ + K + A +VF I+
Sbjct: 409 YSTIL----TVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIE 464
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA-FADVKETIGGR 298
D+ AWSA++ GYAQ G+ EA +F ++ G+ P+E TF ++ A A G+
Sbjct: 465 TKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGK 524
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q H+ IK+ ++ V+++++ Y+K +E + + F E D+VSWN++I+G+
Sbjct: 525 QFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHG 584
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIG 417
+A+E+ ++M + T+ +++ + + G+ ++ + +
Sbjct: 585 QAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHY 644
Query: 418 SALVDMYAKCGRLNDARKVFD 438
S ++D+Y++ G L A + +
Sbjct: 645 SCMIDLYSRAGMLGKAMDIIN 665
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/671 (34%), Positives = 384/671 (57%), Gaps = 14/671 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSR--INDAQKLFDEMPE--RNVISWSALISGFSQIGMP 57
+ SG + N L+ Y R + A +F ++P R+V SW++L++ S+ P
Sbjct: 41 LKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSLLNPLSR-HQP 99
Query: 58 EVALNYFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHG---RMYRSGLELNSH 112
AL++FR M+ + P +++ +A A A +G H ++ S N
Sbjct: 100 LAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVF 159
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC--QCGEHVHGLKIFLLSRK 170
VS L+NMY K G +S A+ VFD RN++SW +++S Y +C E L +L ++
Sbjct: 160 VSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLML-QE 218
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDL 230
+ +EF +VL A +V L +G+Q+H LV K L V L+ +YAK E +D
Sbjct: 219 CPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDA 278
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
A VF + + + WSA+I GYAQ G+A A +F++M S+G P+E TF +L A +D
Sbjct: 279 AMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSD 338
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNA 349
+ + G+Q H L++K+GF +V + ++D Y+KC ++ F ++ D DVV W A
Sbjct: 339 MGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTA 398
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I GH+ + + EA+ L M EG P+ T +++L + + A+E GKQ H I+K G
Sbjct: 399 MITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCG 458
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
F +G+AL MY+KCG L D+ VF + ++++SWN+++ G++QHG GR+AL+++
Sbjct: 459 FGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFE 518
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M+ I P+ TFI VL AC H+GLV+ GW YF +M +D+G+ P++DH A +V + +
Sbjct: 519 EMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRA 578
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
GQ + A +FI+S I+ +WR +L C++ +D +G YA E+++ ED+SA+I+LS
Sbjct: 579 GQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLS 638
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMN 649
N+YA W++ +VR +M+ + + KD GCSW EL N+++ F + ++ +
Sbjct: 639 NIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQVNVFVVGEQQHPEAEKINVELI 698
Query: 650 QLSVHLFDGGY 660
+L+ H+ D GY
Sbjct: 699 RLAKHMKDEGY 709
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 141/429 (32%), Positives = 213/429 (49%), Gaps = 18/429 (4%)
Query: 85 ACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY--GKCGLLSSAQFVF---DASLE 139
A +S R+G +HG +SG ++ VSN LI Y LL +A VF A L
Sbjct: 23 AASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGL- 81
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
R+ SW SLL+ + + + L F ++S V + S A+V A A + + G
Sbjct: 82 RDVASWNSLLNPLSR-HQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGA 140
Query: 198 QIHSLVFKCALEFDK-----FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
H+ F C L FV+ L+N+Y K + A RVF + + +W+A++ G
Sbjct: 141 VAHA--FACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSG 198
Query: 253 YAQLGKACEAIDLFVKMFSS-GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
YA + EA +LF M L +E + VL A + + G QLH L++K G
Sbjct: 199 YATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVG 258
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
F V N+++ Y+K E ++ ++ F E + ++W+A+I G+ + A + M
Sbjct: 259 FVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMH 318
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
G P +T+ ILN SSD+ A+ GKQ H +VK GF+ V + SALVDMYAKCG
Sbjct: 319 SAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTG 378
Query: 432 DARKVFDHL-SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
DA+ F L ++V W M+ G+ Q+G EAL +YS M + + P+ T VL AC
Sbjct: 379 DAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRAC 438
Query: 491 VHIGLVEEG 499
+ +E G
Sbjct: 439 ACLAALEPG 447
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 1/197 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE-RNVISWSALISGFSQIGMPEV 59
M+ GF V + L+ MY K DA+ F ++ + +V+ W+A+I+G Q G E
Sbjct: 352 MVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEE 411
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL + M + P+Y T + ACA GK++H ++ + G L V L
Sbjct: 412 ALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALST 471
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG L + VF +R+ ISW S++S + Q G L +F + G+A +
Sbjct: 472 MYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHIT 531
Query: 180 CASVLGACAVLGNLKVG 196
+VL AC+ +G + G
Sbjct: 532 FINVLCACSHMGLVDRG 548
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/665 (32%), Positives = 359/665 (53%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF+ + + L+ +Y + I DA++LFD+MP ++ + W+ +++GF + G P A+ F
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M C +PN T+ +S CAS + G ++HG + G + V+N L+ MY K
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G LS A +F+ + N ++W +++ + Q G +F +GV+ + AS L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+ +LK G +IH + + + D F+ LI++Y KC + +A ++F D+
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+A+I GY G +A+++F + + P+ VT + VL A A + G++LH+ I
Sbjct: 242 VCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANI 301
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K G V + ++D Y+KC L+ + + F M E D V WNA+I + EAI
Sbjct: 302 LKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAI 361
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L + M EG + + S L+ +++PA+ GK H ++K FDS V SAL+DMY
Sbjct: 362 DLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMY 421
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG L+ AR VFD + KN VSWN+++ Y HG +L ++ M E+ I+P+ TF+
Sbjct: 422 GKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFL 481
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
+LSAC H G V++G YF M ++GI RM+H A +V LF G+ A+E IK+ P
Sbjct: 482 TILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPF 541
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
P+ VW LL C+ H ++ L A+ +L DPE++ +++LSNV+A+A W K+
Sbjct: 542 SPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKI 601
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDP 664
R +MK++ ++K G SW E+ H F + + + ++ V+N L + L GY P P
Sbjct: 602 RSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGYCPKP 661
Query: 665 IYSSH 669
H
Sbjct: 662 YLPMH 666
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/461 (31%), Positives = 247/461 (53%), Gaps = 2/461 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I+ GFH + + N L+ MY KF +++DA KLF+ MP+ NV++W+ +I+GF Q G + A
Sbjct: 99 VISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEA 158
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M+ + P+ T+ + + + GKEIHG + R G+ L+ + + LI++
Sbjct: 159 SLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDI 218
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + A +F S + + +++S Y G + L+IF + ++ + +
Sbjct: 219 YFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTL 278
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASVL ACA L L +G ++H+ + K L+ + V ++++YAKC +LDLA ++F +
Sbjct: 279 ASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPE 338
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+A+I +Q GK EAIDLF +M GL V+ S L A A++ G+ +
Sbjct: 339 KDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAI 398
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS +IK F S F + ++D Y KC L + FD M E + VSWN++IA + + H
Sbjct: 399 HSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHL 458
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
++ L ML +G P+ T+ IL+ ++ G Q C+ + G + + +
Sbjct: 459 EVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYAC 518
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+VD++ + GRLN+A + ++ S + W T+L HG
Sbjct: 519 IVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHG 559
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 158/341 (46%), Gaps = 38/341 (11%)
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
MGF+ FV ++++ Y++ +E++ + FD+M D V WN ++ G + A+++
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+DM PN T++++L+I + E+G Q H ++ GF + ++ +ALV MY+K
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
G+L+DA K+F+ + N+V+WN M+ G+ Q+G EA ++S M + P+ TF
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL-FACR---------------- 529
L + +++G ++R HGI+ + ++++ + F CR
Sbjct: 181 LPSVTESASLKQGKEIHGYILR-HGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVD 239
Query: 530 --------------GQTRRAYEFIK---SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
G A E + + PN V +L C L LG+
Sbjct: 240 IVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHA 299
Query: 573 KILSTDPEDTSAHI--MLSNVYAEANMWDETAKVRKIMKEK 611
IL D H+ + ++YA+ D ++ + M EK
Sbjct: 300 NILKHG-LDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEK 339
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/625 (34%), Positives = 350/625 (56%), Gaps = 3/625 (0%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVC 69
++ +NH +Y K S A +FDEMP+RNV SW+ +I G ++ G+ +F M+
Sbjct: 101 MVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLN 160
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
+ P+ + Y + +C GK +H ++ G + VS L+NMY K G +
Sbjct: 161 SGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIED 220
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
+ +VF+ E N +SW +++S G H+ +F+ + + ++ SV A
Sbjct: 221 SYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGK 280
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN--IQLPDLTAWS 247
L ++ +G ++ + + +E + V LI++Y+KC L A VF I T W+
Sbjct: 281 LVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWN 340
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A+I GY+Q G + EA++L+V+M +G+ T+ V A A K GR +H +++K
Sbjct: 341 AMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKC 400
Query: 308 GFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G V N + D YSKC LE+ K FD M+E D+VSW L+ + S EA+
Sbjct: 401 GLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALAT 460
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M EG PN +T+S++L + + +E+G+Q H + K G D+ I SAL+DMYAK
Sbjct: 461 FCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAK 520
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + +A KVFD +S+ ++VSW ++ GYAQHGL +AL+++ M+ + IK N T + V
Sbjct: 521 CGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCV 580
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L AC H G+VEEG YF M +G+ P M+H A ++ L G+ A EFI+ P+EP
Sbjct: 581 LFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEP 640
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
N++VW+ LL GC+ H ++ LG AA KILS PE ++ +++LSN Y E +++ +R
Sbjct: 641 NEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRN 700
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYF 631
+MK++ +KK+ G SW ++ ++H F
Sbjct: 701 VMKDQGVKKEPGYSWISVKGRVHKF 725
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 241/482 (50%), Gaps = 9/482 (1%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVS--NCLINMYGKCGLLSSAQFVFDASLERNSI 143
CA +G R K +HG + +S E + N ++Y KC +A VFD +RN
Sbjct: 74 CAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVF 133
Query: 144 SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV 203
SW ++ + G G K F SG+ +F+ ++++ +C L +L++G +H+ +
Sbjct: 134 SWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQI 193
Query: 204 FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
FV+ L+N+YAK ++ + VF+ + + +W+A+I G G EA
Sbjct: 194 VMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAF 253
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
DLFV+M + P+ T V A + + G+++ + ++G V ++D Y
Sbjct: 254 DLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMY 313
Query: 324 SKCELLEESLKTFDE--MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYT 381
SKC L ++ FD ++ WNA+I+G+ S EA+EL M G +LYT
Sbjct: 314 SKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYT 373
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV-IGSALVDMYAKCGRLNDARKVFDHL 440
Y ++ N + ++++G+ H ++K G D VV + +A+ D Y+KCG L D RKVFD +
Sbjct: 374 YCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRM 433
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+++VSW T++ Y+Q LG EAL + +M+E PN TF VL +C + +E G
Sbjct: 434 EERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYG- 492
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK 559
+ ++ G+ ++++ ++A C T F K S P+ V W ++SG
Sbjct: 493 RQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKIS--NPDIVSWTAIISGYA 550
Query: 560 TH 561
H
Sbjct: 551 QH 552
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 154/526 (29%), Positives = 250/526 (47%), Gaps = 25/526 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF ++ LL MY K I D+ +F+ M E N +SW+A+ISG + G+ A
Sbjct: 193 IVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEA 252
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M PN YT V A D GKE+ G+E N V LI+M
Sbjct: 253 FDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDM 312
Query: 121 YGKCGLLSSAQFVFDASLERNSIS--WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
Y KCG L A+ VFD + ++ W +++S Y Q G L++++ ++G+ +
Sbjct: 313 YSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLY 372
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF-VAMGLINLYAKCEKLDLASRVFSN 237
+ SV A A +L+ G +H +V KC L+ V + + Y+KC L+ +VF
Sbjct: 373 TYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDR 432
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
++ D+ +W+ L+ Y+Q EA+ F M G P++ TFS VL + A + G
Sbjct: 433 MEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYG 492
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
RQ+H L+ K G + + + ++D Y+KC + E+ K FD++ D+VSW A+I+G+
Sbjct: 493 RQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQH 552
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDS 412
+A++L + M G N T +L S +E G + V P +
Sbjct: 553 GLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEH 612
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGR-EALEI 467
I +D+ + GRL+DA + + N + W T+L G HG LG A +I
Sbjct: 613 YACI----IDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKI 668
Query: 468 YSMMQENKIKPN-DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
S I+P T++ + + + G E+G N M +D G+
Sbjct: 669 LS------IRPEYSATYVLLSNTYIETGSYEDGLSLRNVM-KDQGV 707
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 173/313 (55%), Gaps = 8/313 (2%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLIN----LYAKCEKLDLASRVFSNI 238
VL CA G+++ +H LV K E DK + M L N +Y+KC + A VF +
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFE-DKDL-MVLFNHAAHVYSKCSEFRAACGVFDEM 127
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
++ +W+ +I G + G + F +M +SG++P + +S ++ + + G+
Sbjct: 128 PQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGK 187
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H+ I+ GF++ FV+ ++L+ Y+K +E+S F+ M EH+ VSWNA+I+G ++
Sbjct: 188 MVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNG 247
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ EA +L M PN+YT ++ + + GK+ C + G + NV++G+
Sbjct: 248 LHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 307
Query: 419 ALVDMYAKCGRLNDARKVFD--HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
AL+DMY+KCG L+DAR VFD ++ WN M+ GY+Q G +EALE+Y M +N I
Sbjct: 308 ALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGI 367
Query: 477 KPNDNTFIGVLSA 489
+ T+ V +A
Sbjct: 368 TSDLYTYCSVFNA 380
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/658 (34%), Positives = 369/658 (56%), Gaps = 2/658 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP--EVALNYFRLMVCCV 71
N L+ Y K + A+ +FD + ++VISW+ LI+G+SQ G + F+ M
Sbjct: 47 NSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADN 106
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ PN +T+ G +A ++ G++ H + + V + L+NMY K GLL A+
Sbjct: 107 ILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAR 166
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD ERN ++W +++S Y ++F L R+ ++EF+ SVL A AV
Sbjct: 167 EVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPE 226
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+ G QIH L K L + L+ +YAKC LD + +VF + WSA+I
Sbjct: 227 FVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMIT 286
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
GYAQ G + +A+ LF +M +G+ PSE T VL A +D G+Q+H+ ++K+GF S
Sbjct: 287 GYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFES 346
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
++ ++D Y+K + E++ K F+ + + D+V W ++IAG++ + +A+ L M
Sbjct: 347 QLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQ 406
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
EG PN T +++L S++ A + G+Q H +K G V IGSAL MYAKCG L
Sbjct: 407 MEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLE 466
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
+ VF + ++++SWN M+ G +Q+G G+EALE++ M++ KP+D TF+ VLSAC
Sbjct: 467 EGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACS 526
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
H+GLV+ GW YF M + G+ P+++H A +V + + G+ A EFI+S+ I+ +W
Sbjct: 527 HMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLW 586
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
R LL C+ +++ LG YA EK++ +++SA+++LS +Y ++ +VR +MK +
Sbjct: 587 RILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVR 646
Query: 612 SLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ K+ GCSW EL++ +H F ++ + +LS + D GY P + S+
Sbjct: 647 GVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMKDEGYQPASVTDSY 704
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/473 (31%), Positives = 242/473 (51%), Gaps = 7/473 (1%)
Query: 112 HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHG--LKIFLLSR 169
+++N LIN Y KC L A+ VFD ++ ISW L++ Y Q G +++F R
Sbjct: 44 YLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMR 103
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
+ + + + + A + L ++ G Q H++ K A +D FV L+N+Y K L
Sbjct: 104 ADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLF 163
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A VF + + W+ +I GYA A EA ++F M +E F+ VL A A
Sbjct: 164 EAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALA 223
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ G+Q+H L +K G F + N ++ Y+KC L++SL+ F+ ++ + ++W+A
Sbjct: 224 VPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSA 283
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I G+ S +A++L M F G P+ +T +LN SD A+E GKQ H ++K G
Sbjct: 284 MITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLG 343
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
F+S + I +ALVDMYAK G DARK F++L +LV W +M+ GY Q+G +AL +Y
Sbjct: 344 FESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYC 403
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
MQ I PN+ T VL AC ++ ++G I+ +G+ + +++ ++A
Sbjct: 404 RMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIK-YGLGLEVTIGSALSTMYAKC 462
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDT 582
G + P E + + W ++SG + G+ A E +DT
Sbjct: 463 GNLEEGNIVFRRMP-ERDIISWNAMISGLSQNG---YGKEALELFEEMRQQDT 511
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 250/464 (53%), Gaps = 7/464 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V + LL MY K + +A+++FD MPERN ++W+ +ISG++ + A F LM
Sbjct: 145 DVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMR 204
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ N + + +SA A SGK+IH ++GL + + N L+ MY KCG L
Sbjct: 205 REEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLD 264
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+ VF+ S ++NSI+W ++++ Y Q G+ LK+F +G+ SEF+ VL AC+
Sbjct: 265 DSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACS 324
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
++ G Q+H+ + K E ++ L+++YAK + A + F+ +Q PDL W++
Sbjct: 325 DACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTS 384
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I GY Q G+ +A+ L+ +M G++P+E+T + VL A +++ GRQ+H+ IK G
Sbjct: 385 MIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYG 444
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EAIELL 367
+ + + Y+KC LEE F M E D++SWNA+I+G L+ YG EA+EL
Sbjct: 445 LGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISG-LSQNGYGKEALELF 503
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAK 426
++M + P+ T+ N+L+ S + ++ G + G V + +VD+ ++
Sbjct: 504 EEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSR 563
Query: 427 CGRLNDARKVFDHLS-SKNLVSWNTML---VGYAQHGLGREALE 466
G+L +A++ + + L W +L Y + LG A E
Sbjct: 564 AGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGE 607
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 210/372 (56%), Gaps = 11/372 (2%)
Query: 192 NLKVGMQIHSLVFKCALEFD-KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
+L+ G +H+ + K A ++A LIN YAKC L A VF I D+ +W+ LI
Sbjct: 22 SLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLI 81
Query: 251 GGYAQLGKACEA--IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
GY+Q G + ++LF +M + ++P+ TFS + A +++ G+Q H++ IKM
Sbjct: 82 NGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMA 141
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
FV +++L+ Y K LL E+ + FD M E + V+W +I+G+ GEA E+ +
Sbjct: 142 CFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFE 201
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M E N + ++++L+ + ++ GKQ HC VK G + I +ALV MYAKCG
Sbjct: 202 LMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCG 261
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
L+D+ +VF+ + KN ++W+ M+ GYAQ G +AL+++S M I P++ T +GVL+
Sbjct: 262 SLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLN 321
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT---RRAYEFIKSSPIE 545
AC VEEG N +++ G ++ + ++V ++A G T R+ + +++ +
Sbjct: 322 ACSDACAVEEGKQVHNYLLK-LGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQ----Q 376
Query: 546 PNKVVWRCLLSG 557
P+ V+W +++G
Sbjct: 377 PDLVLWTSMIAG 388
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 158/300 (52%), Gaps = 9/300 (3%)
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF-TFVANTVLDFYSKCELLEES 332
L P ++ L F K GR LH+ IIK+ SS ++AN++++FY+KC L ++
Sbjct: 3 LHPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKA 62
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEA--IELLKDMLFEGHCPNLYTYSNILNISS 390
FD + DV+SWN LI G+ G + +EL + M + PN +T+S I +S
Sbjct: 63 KLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAAS 122
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
++ +I +G+Q H +K +V +GS+L++MY K G L +AR+VFD + +N V+W T
Sbjct: 123 NLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWAT 182
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
M+ GYA L EA E++ +M+ + N+ F VLSA V+ G + +
Sbjct: 183 MISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQ-IHCLAVKT 241
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG----CKTHKDLVL 566
G+ + + ++V ++A G + + + S + N + W +++G +HK L L
Sbjct: 242 GLLVFLSILNALVTMYAKCGSLDDSLQVFEMSN-DKNSITWSAMITGYAQSGDSHKALKL 300
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 6/223 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + L+ MY K DA+K F+ + + +++ W+++I+G+ Q G E A
Sbjct: 339 LLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDA 398
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ + M + PN T + AC++ G++IH R + GL L + + L M
Sbjct: 399 LSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTM 458
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L VF ER+ ISW +++S Q G L++F R+ + +
Sbjct: 459 YAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTF 518
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYA 223
+VL AC+ +G + G L F+ + FD+F + + YA
Sbjct: 519 VNVLSACSHMGLVDSGW----LYFR--MMFDEFGLLPKVEHYA 555
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/665 (33%), Positives = 374/665 (56%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GFH ++ + L+ +Y I+DA+ LFDE+P R+ I W+ +++G+ + G AL F
Sbjct: 207 GFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTF 266
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M ++PN ++V +S CA+RG R+G ++HG + RSG E + V+N +I MY KC
Sbjct: 267 QEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKC 326
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L A+ +FD + ++++W L++ Y Q G + +F SGV + + AS L
Sbjct: 327 GNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFL 386
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+ G+LK ++HS + + + FD ++ L+++Y K +++A + F L D+
Sbjct: 387 PSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVA 446
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+A+I GY G EA++LF + G++P+ +T + VL A A + G++LH I
Sbjct: 447 VCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDI 506
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K G + V +++ Y+K L+ + + F M D V WN +I + AI
Sbjct: 507 LKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAI 566
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L + M G + + S L+ ++ PA+ +GK+ HC +V+ F S+ + S L+DMY
Sbjct: 567 DLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMY 626
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+KCG+L AR VFD + KN VSWN+++ Y HG RE L+++ M E I+P+ TF+
Sbjct: 627 SKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFL 686
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
++SAC H GLV+EG +YF M ++GI RM+H A +V L+ G+ A++ IKS P
Sbjct: 687 VIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPF 746
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
P+ W LL C+ H ++ L + A++ ++ DP ++ +++LSNV+A A W+ KV
Sbjct: 747 TPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKV 806
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDP 664
R +MKEK ++K G SW ++ H FS + Q ++++ ++ L + L GYVP P
Sbjct: 807 RSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQSVEIYLILKNLLLELRKHGYVPQP 866
Query: 665 IYSSH 669
H
Sbjct: 867 YLPLH 871
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 257/513 (50%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + ++ + +L MYV D LF + + W+ LI GFS +G + A
Sbjct: 102 VLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFA 161
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F M+ + P+ YT+ + AC + K +H G ++ + + LI +
Sbjct: 162 LMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKL 221
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G + A+++FD R+ I W +L+ Y + G+ L F R S V + S
Sbjct: 222 YTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSF 281
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+L CA G ++ G+Q+H LV + E D VA +I +Y+KC L A ++F +
Sbjct: 282 VCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQ 341
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+ LI GY Q G EA+ LF M +SG+ +TF+ L + +++
Sbjct: 342 TDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEV 401
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS I++ G ++ + ++D Y K +E + KTF + DV A+I+G++ +
Sbjct: 402 HSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLN 461
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ L + ++ EG PN T +++L + + +++ GK+ HC I+K G ++ +GS++
Sbjct: 462 VEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSI 521
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
MYAK GRL+ A + F + K+ V WN M+V ++Q+G A++++ M + K +
Sbjct: 522 TYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDS 581
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
+ LSAC + + G ++R+ IS
Sbjct: 582 VSLSATLSACANYPALYYGKELHCFVVRNSFIS 614
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 150/521 (28%), Positives = 268/521 (51%), Gaps = 16/521 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF + N ++ MY K + DA+K+FD MP+ + ++W+ LI+G+ Q G + A
Sbjct: 304 VIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEA 363
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F+ MV ++ + T+ + + G + KE+H + R G+ + ++ + L+++
Sbjct: 364 VALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDI 423
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A F + + +++S Y G +V L +F + G+ + +
Sbjct: 424 YFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTM 483
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASVL ACA L +LK+G ++H + K LE V + +YAK +LDLA + F + +
Sbjct: 484 ASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPV 543
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+ +I ++Q GK AIDLF +M +SG V+ S L A A+ G++L
Sbjct: 544 KDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKEL 603
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +++ F S TFVA+T++D YSKC L + FD MD + VSWN++IA +
Sbjct: 604 HCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRP 663
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
E ++L +M+ G P+ T+ I++ ++ G C+ + G + + +
Sbjct: 664 RECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFAC 723
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLV----SWNTMLVGYAQHGLGREALEIYSMMQEN- 474
+VD+Y + GRL++A FD + S +W ++L HG +E+ + ++
Sbjct: 724 MVDLYGRAGRLHEA---FDTIKSMPFTPDAGTWGSLLGACRLHG----NVELAKLASKHL 776
Query: 475 -KIKPNDNTFIGVLSACVHIGLVE-EGWHYFNSMIRDHGIS 513
++ PN++ + +LS VH G E E S++++ G+
Sbjct: 777 VELDPNNSGYYVLLSN-VHAGAGEWESVLKVRSLMKEKGVQ 816
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 220/460 (47%), Gaps = 2/460 (0%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
++IH ++ G+ + + + ++ MY C +F S+ W L+ +
Sbjct: 96 RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G L F S VA +++ V+ AC L N+ + +H L D F+
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
LI LY + A +F + + D W+ ++ GY + G A+ F +M +S +
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P+ V+F +L A G QLH L+I+ GF S VANT++ YSKC L ++ K
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
FD M + D V+WN LIAG++ + EA+ L K M+ G + T+++ L ++
Sbjct: 336 FDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSL 395
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
++ K+ H IV+ G +V + SALVD+Y K G + A K F + ++ M+ GY
Sbjct: 396 KYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGY 455
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
+GL EAL ++ + + + PN T VL AC + ++ G +++ G+
Sbjct: 456 VLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKK-GLENV 514
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+S+ +++A G+ AY+F + P++ + V W ++
Sbjct: 515 CQVGSSITYMYAKSGRLDLAYQFFRRMPVK-DSVCWNLMI 553
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/653 (36%), Positives = 364/653 (55%), Gaps = 6/653 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+ I NH+L MY K + DA+++FD MPERN++S++++I+G+SQ G A+ + M+
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV--SNCLINMYGKCGL 126
L P+ + + + ACAS D GK++H ++ + LE +SH+ N LI MY +
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK--LESSSHLIAQNALIAMYVRFNQ 218
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV-AISEFSCASVLG 185
+S A VF ++ ISW S+++ + Q G L GV +E+ S L
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
AC+ L G QIH L K L + L ++YA+C L+ A RVF I+ PD +
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ +I G A G A EA+ +F +M SSG +P ++ +L A G Q+HS II
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEAI 364
K GF + V N++L Y+ C L F++ + D VSWN ++ L E +
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
L K ML P+ T N+L +I +++ G Q HC +K G I + L+DMY
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMY 518
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG L AR++FD + ++++VSW+T++VGYAQ G G EAL ++ M+ I+PN TF+
Sbjct: 519 AKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFV 578
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVL+AC H+GLVEEG + +M +HGISP +H + VV L A G+ A FI +
Sbjct: 579 GVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL 638
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP+ VVW+ LLS CKT ++ L + AAE IL DP +++AH++L +++A + W+ A +
Sbjct: 639 EPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALL 698
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
R MK+ +KK G SW E+++K+H F + D++ V++ + + D
Sbjct: 699 RSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLD 751
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 248/485 (51%), Gaps = 10/485 (2%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TY+ + AC+S G++IH + S + ++ ++N +++MYGKCG L A+ VFD
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
ERN +S+ S+++ Y Q G+ ++++L + + +F+ S++ ACA ++ +G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+H+ V K LI +Y + ++ ASRVF I + DL +WS++I G++QLG
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 258 KACEAIDLFVKMFSSGLM-PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
EA+ +M S G+ P+E F L A + + G Q+H L IK +
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
++ D Y++C L + + FD+++ D SWN +IAG + + EA+ + M G
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ + ++L + A+ G Q H I+K GF +++ + ++L+ MY C L +
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 437 F-DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
F D ++ + VSWNT+L QH E L ++ +M ++ +P+ T +L CV I
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISS 488
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWR 552
++ G ++ G++P ++ ++A GQ RR ++ + + + V W
Sbjct: 489 LKLGSQVHCYSLKT-GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDV----VSWS 543
Query: 553 CLLSG 557
L+ G
Sbjct: 544 TLIVG 548
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 66/112 (58%)
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
L TY +++ S ++ G++ H I+ + ++ + ++ MY KCG L DAR+VFD
Sbjct: 67 LRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFD 126
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ +NLVS+ +++ GY+Q+G G EA+ +Y M + + P+ F ++ AC
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKAC 178
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/642 (34%), Positives = 358/642 (55%), Gaps = 9/642 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL M+V+F + +A +F +M ER++ SW+ L+ G+++ G + ALN + M+ +
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT+ + C D G+E+H + R G E + V N LI MY KCG + SA+ V
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD R+ ISW +++S Y + + GL++F + R+ V + SV+ AC LG+
Sbjct: 253 FDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDE 312
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G ++H V K + V LI +++ D A VFS ++ DL +W+A+I GY
Sbjct: 313 RLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGY 372
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G +A++ + M G++P E+T + VL A A + G LH + G +S+
Sbjct: 373 EKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYV 432
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
VAN+++D YSKC ++++L+ F + +V+SW ++I G + EA+ + M+
Sbjct: 433 IVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS 492
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN T ++L+ + I A+ GK+ H ++ G + + +AL+DMY +CGR+ A
Sbjct: 493 LK-PNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
F+ K++ SWN +L GYAQ G G A+E++ M E+ + P++ TF +L AC
Sbjct: 552 WNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRS 610
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G+V +G YF SM I+P + H ASVV L G+ AYEFIK PI+P+ +W
Sbjct: 611 GMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGA 670
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL+ C+ ++++ LG AA+ I D + +I+L N+YA++ WDE A+VRKIM+E L
Sbjct: 671 LLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRL 730
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
D GCSW E+ ++H F T G D H + +++ L
Sbjct: 731 TVDPGCSWVEVAGQVHAFLT-------GDDFHPQIKEINAVL 765
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/541 (28%), Positives = 255/541 (47%), Gaps = 46/541 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +V N L+ MYVK I A+ +FD MP R+ ISW+A+ISG+ + +
Sbjct: 221 VIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEG 280
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F +M ++P+ T +SAC + GD R G+E+HG + ++G V+N LI M
Sbjct: 281 LRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQM 340
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ G A+ VF ++ +SW +++S Y + G ++ + + GV E +
Sbjct: 341 HSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITI 400
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASVL ACA LG L G+ +H + L VA LI++Y+KC +D A VF I
Sbjct: 401 ASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN 460
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+++I G ++ EA+ F +M S L P+ VT VL A A + G+++
Sbjct: 461 KNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEI 519
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++ G F+ N +LD Y +C +E + F+ E DV SWN L+ G+
Sbjct: 520 HAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKG 578
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSNVV 415
G A+EL M+ P+ T++++L S + G + H + P N+
Sbjct: 579 GLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAP----NLK 634
Query: 416 IGSALVDMYAKCGRLNDARKVFD---------------------------HLSSKNLVSW 448
+++VD+ + GRL DA + L+++++
Sbjct: 635 HYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEM 694
Query: 449 NTMLVG--------YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+T VG YA G E + +M+EN++ + ++ VH L + +
Sbjct: 695 DTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDF 754
Query: 501 H 501
H
Sbjct: 755 H 755
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 211/422 (50%), Gaps = 1/422 (0%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TY+ + C + A G +H + ++ L + N L++M+ + G L A +VF
Sbjct: 96 TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
ER+ SW L+ Y + G L ++ G+ ++ VL C L +L G
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
++H V + E D V LI +Y KC + A VF + D +W+A+I GY +
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEND 275
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
E + LF M + P +T + V+ A + + GR++H +IK GF + V N
Sbjct: 276 VCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNN 335
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
+++ +S +E+ F +M+ D+VSW A+I+G+ + +A+E M EG P
Sbjct: 336 SLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVP 395
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ T +++L+ + + ++ G H + G S V++ ++L+DMY+KC ++ A +VF
Sbjct: 396 DEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVF 455
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ +KN++SW ++++G + EAL + M + +KPN T + VLSAC IG +
Sbjct: 456 HRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALS 514
Query: 498 EG 499
G
Sbjct: 515 CG 516
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 173/327 (52%)
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
V++ E + ++L C G ++HS V K + L++++ + L A
Sbjct: 90 VSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAW 149
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
VF + DL +W+ L+GGYA+ G EA++L+ +M G+ P TF VL +
Sbjct: 150 YVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLP 209
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
+ GR++H +I+ GF S V N ++ Y KC + + FD M D +SWNA+I+
Sbjct: 210 DLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMIS 269
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
G+ + E + L M P+L T +++++ + G++ H ++K GF +
Sbjct: 270 GYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVA 329
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
V + ++L+ M++ G ++A VF + K+LVSW M+ GY ++GL +A+E Y++M+
Sbjct: 330 EVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIME 389
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ P++ T VLSAC +GL+++G
Sbjct: 390 HEGVVPDEITIASVLSACAGLGLLDKG 416
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/642 (34%), Positives = 358/642 (55%), Gaps = 9/642 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL M+V+F + +A +F +M ER++ SW+ L+ G+++ G + ALN + M+ +
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT+ + C D G+E+H + R G E + V N LI MY KCG + SA+ V
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD R+ ISW +++S Y + + GL++F + R+ V + SV+ AC LG+
Sbjct: 253 FDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDE 312
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G ++H V K + V LI +++ D A VFS ++ DL +W+A+I GY
Sbjct: 313 RLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGY 372
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G +A++ + M G++P E+T + VL A A + G LH + G +S+
Sbjct: 373 EKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYV 432
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
VAN+++D YSKC ++++L+ F + +V+SW ++I G + EA+ + M+
Sbjct: 433 IVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS 492
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN T ++L+ + I A+ GK+ H ++ G + + +AL+DMY +CGR+ A
Sbjct: 493 LK-PNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
F+ K++ SWN +L GYAQ G G A+E++ M E+ + P++ TF +L AC
Sbjct: 552 WNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRS 610
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G+V +G YF SM I+P + H ASVV L G+ AYEFIK PI+P+ +W
Sbjct: 611 GMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGA 670
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL+ C+ ++++ LG AA+ I D + +I+L N+YA++ WDE A+VRKIM+E L
Sbjct: 671 LLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRL 730
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
D GCSW E+ ++H F T G D H + +++ L
Sbjct: 731 TVDPGCSWVEVAGQVHAFLT-------GDDFHPQIKEINAVL 765
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 223/438 (50%), Gaps = 11/438 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +V N L+ MYVK I A+ +FD MP R+ ISW+A+ISG+ + +
Sbjct: 221 VIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEG 280
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F +M ++P+ T +SAC + GD R G+E+HG + ++G V+N LI M
Sbjct: 281 LRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQM 340
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ G A+ VF ++ +SW +++S Y + G ++ + + GV E +
Sbjct: 341 HSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITI 400
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASVL ACA LG L G+ +H + L VA LI++Y+KC +D A VF I
Sbjct: 401 ASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN 460
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+++I G ++ EA+ F +M S L P+ VT VL A A + G+++
Sbjct: 461 KNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEI 519
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++ G F+ N +LD Y +C +E + F+ E DV SWN L+ G+
Sbjct: 520 HAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKG 578
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSNVV 415
G A+EL M+ P+ T++++L S + G + H + P N+
Sbjct: 579 GLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAP----NLK 634
Query: 416 IGSALVDMYAKCGRLNDA 433
+++VD+ + GRL DA
Sbjct: 635 HYASVVDLLGRAGRLEDA 652
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 211/422 (50%), Gaps = 1/422 (0%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TY+ + C + A G +H + ++ L + N L++M+ + G L A +VF
Sbjct: 96 TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
ER+ SW L+ Y + G L ++ G+ ++ VL C L +L G
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
++H V + E D V LI +Y KC + A VF + D +W+A+I GY +
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEND 275
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
E + LF M + P +T + V+ A + + GR++H +IK GF + V N
Sbjct: 276 VCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNN 335
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
+++ +S +E+ F +M+ D+VSW A+I+G+ + +A+E M EG P
Sbjct: 336 SLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVP 395
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ T +++L+ + + ++ G H + G S V++ ++L+DMY+KC ++ A +VF
Sbjct: 396 DEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVF 455
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ +KN++SW ++++G + EAL + M + +KPN T + VLSAC IG +
Sbjct: 456 HRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALS 514
Query: 498 EG 499
G
Sbjct: 515 CG 516
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 173/327 (52%)
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
V++ E + ++L C G ++HS V K + L++++ + L A
Sbjct: 90 VSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAW 149
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
VF + DL +W+ L+GGYA+ G EA++L+ +M G+ P TF VL +
Sbjct: 150 YVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLP 209
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
+ GR++H +I+ GF S V N ++ Y KC + + FD M D +SWNA+I+
Sbjct: 210 DLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMIS 269
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
G+ + E + L M P+L T +++++ + G++ H ++K GF +
Sbjct: 270 GYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVA 329
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
V + ++L+ M++ G ++A VF + K+LVSW M+ GY ++GL +A+E Y++M+
Sbjct: 330 EVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIME 389
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ P++ T VLSAC +GL+++G
Sbjct: 390 HEGVVPDEITIASVLSACAGLGLLDKG 416
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/670 (34%), Positives = 370/670 (55%), Gaps = 1/670 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG V N L+ M+ R++DA+KLFD M E + ISW+A+IS +S G+
Sbjct: 171 VIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKC 230
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M L P+ T +S CAS G IH RS L+ + V N L+NM
Sbjct: 231 FLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNM 290
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G LS A+F+F R+ ISW +++SSY Q LK + + + +
Sbjct: 291 YSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTF 350
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S LGAC+ G L G +H++V + +L+ + V LI +Y KC ++ A +VF ++
Sbjct: 351 SSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT 410
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQ 299
D+ +++ LIGGYA L +A+ +F M S+G+ P+ +T + G+FA + GR
Sbjct: 411 HDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRP 470
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH+ II+ GF S +VAN+++ Y+KC LE S F+ + ++VSWNA+IA ++ H
Sbjct: 471 LHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGH 530
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA++L DM G+ + + L+ + + ++E G Q H +K G DS+ + +A
Sbjct: 531 GEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNA 590
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
+DMY KCG++++ +V + + WNT++ GYA++G +EA E + M KP+
Sbjct: 591 AMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPD 650
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ +LSAC H GLV++G Y+NSM G+SP + H +V L G+ A +FI
Sbjct: 651 YVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFI 710
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ P+ PN ++WR LLS +THK+L +GR A+K+L DP D SA+++LSN+YA W
Sbjct: 711 EEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWA 770
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ K+R MK ++ K CSW +L+N++ F ++ ++++ + L + G
Sbjct: 771 DVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVG 830
Query: 660 YVPDPIYSSH 669
Y+ D + H
Sbjct: 831 YIADTSSALH 840
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 222/454 (48%), Gaps = 3/454 (0%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARS- 94
M +R +W +SG + G A R M + + + V+AC RG
Sbjct: 1 MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 95 --GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
G IH +R+GL N ++ L+++YG G++S AQ +F ERN +SW +L+ +
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVAL 120
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
G L+ + R+ GV + + A+V+ C L N G+Q+ S V L+
Sbjct: 121 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQV 180
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
VA LI ++ ++ A ++F ++ D +W+A+I Y+ G + +F M
Sbjct: 181 SVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHH 240
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
GL P T ++ A G +HSL ++ S V N +++ YS L ++
Sbjct: 241 GLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
F M D++SWN +I+ ++ +C+ +A++ L + PN T+S+ L S
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSP 360
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
A+ GK H +++ N+++G++L+ MY KC + DA KVF + + ++VS+N ++
Sbjct: 361 GALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLI 420
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
GYA G +A++++S M+ IKPN T I +
Sbjct: 421 GGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINI 454
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 182/366 (49%), Gaps = 7/366 (1%)
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN---LKV 195
+R +W + +S +CG ++ R+ GV +S F+ AS++ AC G +
Sbjct: 3 DRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIAC 62
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G IH+L + L + ++ L++LY + A R+F + ++ +W+AL+ +
Sbjct: 63 GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 122
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G EA+ + +M G+ + F+ V+ ++ + G Q+ S +I G + V
Sbjct: 123 NGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSV 182
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA--GHLASCHYGEAIELLKDMLFE 373
AN+++ + + ++ K FD M+EHD +SWNA+I+ H C + + DM
Sbjct: 183 ANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGIC--SKCFLVFSDMRHH 240
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G P+ T +++++ + G H ++ DS+V + +ALV+MY+ G+L+DA
Sbjct: 241 GLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+F ++S ++L+SWNTM+ Y Q+ +AL+ + PN TF L AC
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSP 360
Query: 494 GLVEEG 499
G + +G
Sbjct: 361 GALIDG 366
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/661 (35%), Positives = 368/661 (55%), Gaps = 6/661 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S + I NH+L MY K + DA+++FD MPERN++S++++I+G+SQ G A
Sbjct: 90 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEA 149
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV--SNCLI 118
+ + M+ L P+ + + + ACA GD GK++H ++ + LE +SH+ N LI
Sbjct: 150 ITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIK--LESSSHLIAQNALI 207
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV-AISE 177
MY + +S A VF ++ ISW S+++ + Q G L GV +E
Sbjct: 208 AMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNE 267
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ S L AC+ L G QIH L K L + L ++YA+C LD A RVF+
Sbjct: 268 YIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQ 327
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
I+ PD +W+ +I G A G A EA+ +F +M +SG +P ++ +L A G
Sbjct: 328 IERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQG 387
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLA 356
Q+HS IIK GF + V N++L Y+ C L F++ ++ D VSWNA++ L
Sbjct: 388 MQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQ 447
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
E + L K ML P+ T N+L +I +++ G Q HC K G I
Sbjct: 448 HEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFI 507
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ L+DMYAKCG L AR++FD + + ++VSW+T++VGYAQ G G EAL ++ M+ + I
Sbjct: 508 KNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGI 567
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
+PN TF+GVL+AC H+GLVEEG + M +HGISP +H + VV L A G A
Sbjct: 568 EPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAE 627
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
FI +EP+ VVW+ LLS CKT ++ L + AAE IL DP +++AH++L +++A +
Sbjct: 628 RFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSG 687
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W++ A +R MK+ +KK G SW ++++K+H F + D++ V++ + +
Sbjct: 688 NWEDAALLRSSMKKHDVKKIPGQSWIDVEDKIHIFFAEDVLHPERDDIYTVLHNIWSQML 747
Query: 657 D 657
D
Sbjct: 748 D 748
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 225/424 (53%), Gaps = 2/424 (0%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TY+ + AC+S G++IH + S + ++ ++N +++MYGKCG L A+ VFD
Sbjct: 66 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 125
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
ERN +S+ S+++ Y Q G+ + ++L ++ + +F+ S++ ACA G++ +G
Sbjct: 126 PERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGK 185
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+H+ V K LI +Y + ++ AS+VF I DL +WS++I G++QLG
Sbjct: 186 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLG 245
Query: 258 KACEAIDLFVKMFSSGLM-PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
EA+ +M S G+ P+E F L A + + G Q+H L IK+ +
Sbjct: 246 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAG 305
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
++ D Y++C L+ + + F++++ D SWN +IAG + + EA+ + +M G
Sbjct: 306 CSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFI 365
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ + ++L + A+ G Q H I+K GF +++ + ++L+ MY C L +
Sbjct: 366 PDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNL 425
Query: 437 FDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
F+ +K + VSWN +L QH E L ++ +M ++ +P+ T +L CV I
Sbjct: 426 FEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISS 485
Query: 496 VEEG 499
++ G
Sbjct: 486 LKLG 489
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%)
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
L TY +++ S ++ G++ H I+ + ++ + ++ MY KCG L DAR+VFD
Sbjct: 64 LRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFD 123
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+ +NLVS+ +++ GY+Q+G EA+ +Y M + + P+ F ++ AC G V
Sbjct: 124 FMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVL 183
Query: 499 GWHYFNSMIR 508
G +I+
Sbjct: 184 GKQLHAQVIK 193
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/663 (33%), Positives = 371/663 (55%), Gaps = 1/663 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ +V L+ Y K + I+DA+ LFD + + +W+ +I+G+S+ G +V+
Sbjct: 167 VVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVS 226
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + P+ Y +SAC GK+IH + RSG+ ++ + N I+
Sbjct: 227 LKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDF 286
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + + +FD +++N +SW ++++ Q H L +F+ + G F C
Sbjct: 287 YFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGC 346
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL +C L L+ G Q+H+ K ++ D FV GLI++YAKC+ L A +VF+ +
Sbjct: 347 TSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAA 406
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL +++A+I GY++ K CEA+DLF +M S P+ + F +LG A + Q+
Sbjct: 407 IDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQI 466
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H LIIK G S F + ++D YSKC + ++ F+E+ + D+V W A+ +G+
Sbjct: 467 HGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSEN 526
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
E+++L K + PN +T++ ++ +S+I ++ G+Q H ++K GFD + + + L
Sbjct: 527 EESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTL 586
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAK G + +A K F + K+ WN+M+ YAQHG +AL+++ M +KPN
Sbjct: 587 VDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNY 646
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+GVLSAC H GL++ G+ +F+SM GI P ++H +V L G+ A EFI+
Sbjct: 647 VTFVGVLSACSHTGLLDLGFDHFDSM-SQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIE 705
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
PI+ VVWR LLS C+ ++ LG YAAE +S +P D+ ++++LSN++A MW
Sbjct: 706 KMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVN 765
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
++R+ M + K+ GCSW E+ N++H F A + V++ L + + GY
Sbjct: 766 VRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLLQIKGFGY 825
Query: 661 VPD 663
+ +
Sbjct: 826 MAN 828
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 271/510 (53%), Gaps = 2/510 (0%)
Query: 1 MITSGFHP-NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV 59
++ GFH ++ N LL Y K + +N A KLFD M +N+++WS+++S ++
Sbjct: 64 IVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLE 123
Query: 60 ALNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
AL F + M C +PN Y V AC G +IHG + + G + +V LI
Sbjct: 124 ALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLI 183
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+ Y K + A+ +FD + S +W ++++ Y + G LK+F ++ V ++
Sbjct: 184 DFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKY 243
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+SVL AC +L L+ G QIH V + + D + G I+ Y KC K+ L ++F +
Sbjct: 244 VLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRM 303
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
++ +W+ +I G Q +A+DLFV+M G P + VL + + GR
Sbjct: 304 VDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGR 363
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+ IK+ + FV N ++D Y+KC+ L ++ K F+ M D+VS+NA+I G+
Sbjct: 364 QVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQD 423
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA++L ++M P L + ++L +S+ + +E Q H I+K G + GS
Sbjct: 424 KLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGS 483
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+D+Y+KC R+ DAR VF+ + K++V W M GY Q E+L++Y +Q +++KP
Sbjct: 484 ALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKP 543
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
N+ TF V++A +I + G + N +I+
Sbjct: 544 NEFTFAAVITAASNIASLRHGQQFHNQVIK 573
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/696 (31%), Positives = 379/696 (54%), Gaps = 33/696 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF + N L+ MY K K+FDEM ERN ++W+++IS +Q G A
Sbjct: 302 LIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDA 361
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + N + + A A D G+E+HG + R+ L + + + L++M
Sbjct: 362 LVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDM 421
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
Y KCG++ A VF + LERN +S+ +LL+ Y Q G+ L+++ + + G+ +F+
Sbjct: 422 YSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFT 481
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++L CA N G QIH+ + + + + V L+++Y++C +L+ A +F+ +
Sbjct: 482 FTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA 541
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+++I GY Q G+ EA+ LF +M +G+ P + S +L + + ++ GR+
Sbjct: 542 ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRE 601
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKC-------ELLEESLKT----------------- 335
LH+ I++ + ++D Y+KC ++ ++++K
Sbjct: 602 LHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGR 661
Query: 336 -------FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
FD+M++ + WN+++AG+ E+ +ML ++ T I+N+
Sbjct: 662 ANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNL 721
Query: 389 SSDIPAIEWGKQTHCCIVKPGF-DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
S +PA+E G Q H I+K GF + +VV+ +ALVDMY+KCG + AR VFD+++ KN+VS
Sbjct: 722 CSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVS 781
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
WN M+ GY++HG +EAL +Y M + + PN+ TF+ +LSAC H GLVEEG F SM
Sbjct: 782 WNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQ 841
Query: 508 RDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLG 567
D+ I + +H +V L G+ A EF++ PIEP W LL C+ HKD+ +G
Sbjct: 842 EDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMG 901
Query: 568 RYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNK 627
R AA+++ DP++ ++++SN+YA A W E +R++MK K +KKD G SW E+ ++
Sbjct: 902 RLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSE 961
Query: 628 MHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ F + +++ + L++ GY+PD
Sbjct: 962 IQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPD 997
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/513 (29%), Positives = 278/513 (54%), Gaps = 4/513 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRIND---AQKLFDEMPERNVISWSALISGFSQIGMP 57
MI++G++P+ +L++Y + ++D A+KLF+EMPERN+ +W+ +I ++++
Sbjct: 97 MISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDY 156
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
L + M + +T+ + AC + D +++ + ++GL N V L
Sbjct: 157 MEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGAL 216
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
++ Y + G + A D + ++W ++++ Y + IF K GV
Sbjct: 217 VDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDN 276
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
F+ AS L C L + G Q+HS + C + D FV LI++YAKC+ + +VF
Sbjct: 277 FTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDE 336
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ + W+++I AQ G +A+ LF++M SG + +L A A + + G
Sbjct: 337 MGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKG 396
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
R+LH +++ +S + + ++D YSKC ++EE+ + F + E + VS+NAL+AG++
Sbjct: 397 RELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQE 456
Query: 358 CHYGEAIELLKDMLFE-GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
EA+EL DM E G P+ +T++ +L + ++ G+Q H +++ N+++
Sbjct: 457 GKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIV 516
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ LV MY++CGRLN A+++F+ ++ +N SWN+M+ GY Q+G +EAL ++ MQ N I
Sbjct: 517 ETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGI 576
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
KP+ + +LS+CV + ++G N ++R+
Sbjct: 577 KPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN 609
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/593 (27%), Positives = 299/593 (50%), Gaps = 33/593 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + N+ L+ Y +F ++DA DE+ +V++W+A+I+G+ +I E A
Sbjct: 201 VVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEA 260
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M+ + P+ +T+ A+ C + GK++H ++ G + ++ V N LI+M
Sbjct: 261 WGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDM 320
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC S VFD ERN ++W S++S+ Q G L +FL ++SG + F+
Sbjct: 321 YAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNL 380
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L A A L ++ G ++H + + L D + L+++Y+KC ++ A +VF ++
Sbjct: 381 GSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLE 440
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +++AL+ GY Q GKA EA++L+ M S G+ P + TF+ +L A+ + GRQ
Sbjct: 441 RNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQ 500
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ +I+ + V ++ YS+C L + + F+ M E + SWN++I G+ +
Sbjct: 501 IHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGE 560
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA+ L K M G P+ ++ S++L+ + + G++ H IV+ + ++
Sbjct: 561 TQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVV 620
Query: 420 LVDMYAKC-------------------------------GRLNDARKVFDHLSSKNLVSW 448
LVDMYAKC GR NDA+ +FD + +N W
Sbjct: 621 LVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALW 680
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
N++L GYA GL +E+ + M E+ I+ + T + +++ C + +E G + +I+
Sbjct: 681 NSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIK 740
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++ + ++V +++ G +A + N V W ++SG H
Sbjct: 741 KGFVNCSVVLETALVDMYSKCGAITKARTVFDNMN-GKNIVSWNAMISGYSKH 792
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 256/487 (52%), Gaps = 6/487 (1%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS---AQ 131
N Y + C + GK IH +M +G ++++ ++ +Y + G L A+
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
+F+ ERN +W +++ +Y + +++ L+++ R SG +F+ SV+ AC +
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAME 189
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
++ Q+ S V K L + FV L++ YA+ +D A I+ + W+A+I
Sbjct: 190 DMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIA 249
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
GY ++ EA +F +M G+ P TF+ L ++ GG+Q+HS +I GF
Sbjct: 250 GYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKG 309
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
TFV N ++D Y+KC+ E LK FDEM E + V+WN++I+ H+ +A+ L M
Sbjct: 310 DTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQ 369
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
G+ N + +IL S+ + I G++ H +V+ +S++++GSALVDMY+KCG +
Sbjct: 370 ESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVE 429
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ-ENKIKPNDNTFIGVLSAC 490
+A +VF L +N VS+N +L GY Q G EALE+Y MQ E+ I+P+ TF +L+ C
Sbjct: 430 EAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLC 489
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
+ +G +IR + I+ + +VH+++ G+ A E I + E N
Sbjct: 490 ANQRNDNQGRQIHAHLIRAN-ITKNIIVETELVHMYSECGRLNYAKE-IFNRMAERNAYS 547
Query: 551 WRCLLSG 557
W ++ G
Sbjct: 548 WNSMIEG 554
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/670 (34%), Positives = 370/670 (55%), Gaps = 1/670 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG V N L+ M+ R++DA+KLFD M E + ISW+A+IS +S G+
Sbjct: 473 VIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKC 532
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M L P+ T +S CAS G IH RS L+ + V N L+NM
Sbjct: 533 FLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNM 592
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G LS A+F+F R+ ISW +++SSY Q LK + + + +
Sbjct: 593 YSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTF 652
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S LGAC+ G L G +H++V + +L+ + V LI +Y KC ++ A +VF ++
Sbjct: 653 SSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT 712
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQ 299
D+ +++ LIGGYA L +A+ +F M S+G+ P+ +T + G+FA + GR
Sbjct: 713 HDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRP 772
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH+ II+ GF S +VAN+++ Y+KC LE S F+ + ++VSWNA+IA ++ H
Sbjct: 773 LHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGH 832
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA++L DM G+ + + L+ + + ++E G Q H +K G DS+ + +A
Sbjct: 833 GEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNA 892
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
+DMY KCG++++ +V + + WNT++ GYA++G +EA E + M KP+
Sbjct: 893 AMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPD 952
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ +LSAC H GLV++G Y+NSM G+SP + H +V L G+ A +FI
Sbjct: 953 YVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFI 1012
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ P+ PN ++WR LLS +THK+L +GR A+K+L DP D SA+++LSN+YA W
Sbjct: 1013 EEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWA 1072
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ K+R MK ++ K CSW +L+N++ F ++ ++++ + L + G
Sbjct: 1073 DVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVG 1132
Query: 660 YVPDPIYSSH 669
Y+ D + H
Sbjct: 1133 YIADTSSALH 1142
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 226/458 (49%), Gaps = 3/458 (0%)
Query: 32 LFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGD 91
LFDEM +R +W +SG + G A R M + + + V+AC RG
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358
Query: 92 ARS---GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
G IH +R+GL N ++ L+++YG G++S AQ +F ERN +SW +L
Sbjct: 359 DEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTAL 418
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
+ + G L+ + R+ GV + + A+V+ C L N G+Q+ S V L
Sbjct: 419 MVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGL 478
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+ VA LI ++ ++ A ++F ++ D +W+A+I Y+ G + +F
Sbjct: 479 QNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSD 538
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M GL P T ++ A G +HSL ++ S V N +++ YS
Sbjct: 539 MRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGK 598
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
L ++ F M D++SWN +I+ ++ +C+ +A++ L + PN T+S+ L
Sbjct: 599 LSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGA 658
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
S A+ GK H +++ N+++G++L+ MY KC + DA KVF + + ++VS+
Sbjct: 659 CSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSY 718
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
N ++ GYA G +A++++S M+ IKPN T I +
Sbjct: 719 NVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINI 756
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 202/410 (49%), Gaps = 10/410 (2%)
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGK---CGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
IHG R L L++ N L+ Y + ++A +FD +R +W + +S +
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN---LKVGMQIHSLVFKCALEFD 211
CG H ++ R+ GV +S F+ AS++ AC G + G IH+L + L +
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
++ L++LY + A R+F + ++ +W+AL+ + G EA+ + +M
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
G+ + F+ V+ ++ + G Q+ S +I G + VAN+++ + + +
Sbjct: 441 DGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHD 500
Query: 332 SLKTFDEMDEHDVVSWNALIA--GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
+ K FD M+EHD +SWNA+I+ H C + + DM G P+ T +++++
Sbjct: 501 AEKLFDRMEEHDTISWNAMISMYSHQGIC--SKCFLVFSDMRHHGLRPDATTLCSLMSVC 558
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
+ G H ++ DS+V + +ALV+MY+ G+L+DA +F ++S ++L+SWN
Sbjct: 559 ASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWN 618
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
TM+ Y Q+ +AL+ + PN TF L AC G + +G
Sbjct: 619 TMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDG 668
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGK---CGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
IHG R L L++ N L+ Y + ++A +FD +R +W + +S +
Sbjct: 38 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN---LKVGMQIHSLVFKCALEFD 211
CG ++ R+ GV +S F+ AS++ AC G + G IH+L + L +
Sbjct: 98 CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 157
Query: 212 KFVAMGLINL--YAKCEKLDLAS 232
++ L++L + E LD S
Sbjct: 158 VYIGRALLHLPQIRRREALDAVS 180
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 32 LFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGD 91
LFDEM +R +W +SG + G A R M + + + V+AC RG
Sbjct: 76 LFDEMADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGR 135
Query: 92 ARS---GKEIHGRMYRSGLELNSHVSNCLINM 120
G IH +R+GL N ++ L+++
Sbjct: 136 DEGIACGAAIHALTHRAGLMGNVYIGRALLHL 167
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 6/130 (4%)
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCE---LLEESLKTFDEMDEHDVVSWNALIAGHLA 356
+H L +++ F NT+L FY + +L FDEM + +W ++G +
Sbjct: 38 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNI---SSDIPAIEWGKQTHCCIVKPGFDSN 413
G A E+L+ M G + + ++++ I G H + G N
Sbjct: 98 CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 157
Query: 414 VVIGSALVDM 423
V IG AL+ +
Sbjct: 158 VYIGRALLHL 167
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/625 (33%), Positives = 366/625 (58%), Gaps = 11/625 (1%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG 95
MP +NV++W++++SG+++ G PE AL F MV + PN + A+ ACA G R+G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
+++H R+G ++ + +CLI MY +CG L +A+ VFD + + + SL+S++C+
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS-LVFKCALEFDK-F 213
GE + + K G+ +E + ++L AC + +G QIH L+ K L +
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVY 176
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
+ LI+ Y++ + LA VF ++ ++ +W +++ Y + G+ EA+ +F M S G
Sbjct: 177 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 236
Query: 274 LMPSEVTFSYVLGAFADVKETIG-GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
+ P+E S VLGA +IG GRQLH IK + V+N +L Y + L+EE
Sbjct: 237 VDPNEFALSIVLGACG----SIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEEL 292
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
++++ D+VSW I+ + + +AI LL M EG PN Y +S++L+ +D+
Sbjct: 293 EAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADV 352
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+++ G Q HC +K G DS + G+AL++MY+KCG++ AR FD + + ++ SWN+++
Sbjct: 353 ASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLI 412
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
G+AQHG +ALE++S M+ N IKP+D+TF+GVL C H G+VEEG +F MI +
Sbjct: 413 HGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSF 472
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
+P H A ++ + G+ A I P EP+ ++W+ LL+ CK H++L +G+ AA+
Sbjct: 473 TPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAAD 532
Query: 573 KILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
+++ D+++++++SN+YA W++ KVR+ M E +KKD GCSW E+ N++H F+
Sbjct: 533 RLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFA 592
Query: 633 TSRFAQFQGIDLHEVMNQLSVHLFD 657
+ + +++++ +L + D
Sbjct: 593 SRDMSHPNSDSIYQMLGELVAVMQD 617
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 225/461 (48%), Gaps = 11/461 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + + L+ MY + + A+++FD M +V+ +++LIS F + G E+A
Sbjct: 68 VRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAA 127
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNS-HVSNCLIN 119
M+ L+PN +T ++AC G++IHG + + GL S + S LI+
Sbjct: 128 EALIQMLKQGLKPNEHTMTTILTACPR----VLGQQIHGYLIKKIGLRSQSVYSSTALID 183
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y + G A+ VFD+ +N +SW S++ Y + G L++F GV +EF+
Sbjct: 184 FYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFA 243
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ VLGAC G++ +G Q+H K L D V+ L+++Y + ++ + + I+
Sbjct: 244 LSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIE 300
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PDL +W+ I Q G +AI L +M S G P+ FS VL + ADV G Q
Sbjct: 301 NPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ 360
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H L +K+G S N +++ YSKC + + FD M HDV SWN+LI GH
Sbjct: 361 FHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGD 420
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-THCCIVKPGFDSNVVIGS 418
+A+E+ M G P+ T+ +L + +E G+ I + F +
Sbjct: 421 ANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYA 480
Query: 419 ALVDMYAKCGRLNDA-RKVFDHLSSKNLVSWNTMLVGYAQH 458
++DM + GR ++A R + D + + W T+L H
Sbjct: 481 CMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH 521
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/677 (34%), Positives = 386/677 (57%), Gaps = 11/677 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPE 58
+I SG + + N L+ +Y K +A +F M +R+++SWSA+IS F+ M
Sbjct: 65 LIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMES 124
Query: 59 VALNYFRLMVCC---VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS- 114
AL F M+ C ++ PN Y + + +C++ +G I + ++G +SHV
Sbjct: 125 RALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGY-FDSHVCV 183
Query: 115 NC-LINMYGKCGL-LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
C LI+M+ K GL + SA+ VFD +N ++W +++ Y Q G + +F S
Sbjct: 184 GCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSE 243
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+F+ S+L AC L +G Q+HS V + L D FV L+++YAK ++ +
Sbjct: 244 YTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSR 303
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
++F+ + ++ +W+ALI GY Q + EAI LF M + P+ TFS VL A A +
Sbjct: 304 KIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLP 363
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
+ G+QLH IK+G S+ V N++++ Y++ +E + K F+ + E +++S+N
Sbjct: 364 DFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAAD 423
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
+ + E+ + G P +TY+ +L+ ++ I I G+Q H IVK GF +
Sbjct: 424 ANAKALDSDESFNHEVEHTGVGASP--FTYACLLSGAACIGTIVKGEQIHALIVKSGFGT 481
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
N+ I +AL+ MY+KCG A +VF+ + +N+++W +++ G+A+HG +ALE++ M
Sbjct: 482 NLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEML 541
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
E +KPN+ T+I VLSAC H+GL++E W +FNSM +H ISPRM+H A +V L G
Sbjct: 542 EIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLL 601
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
A EFI S P + + +VWR L C+ H++ LG +AA+KIL +P D + +I+LSN+Y
Sbjct: 602 LEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLY 661
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
A WD+ A +RK MK+K L K+TG SW E+ N++H F + Q +++ +++L+
Sbjct: 662 ASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELA 721
Query: 653 VHLFDGGYVPDPIYSSH 669
+ + + GY+P+ + H
Sbjct: 722 LKIKNLGYIPNTDFVLH 738
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 249/488 (51%), Gaps = 15/488 (3%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD--ASLER 140
+ AC G+ GK +H ++ SGL L+S + N LI +Y KCG +A +F +R
Sbjct: 46 LKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKR 105
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIF---LLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+ +SW +++S + L F L ++ + +E+ ++L +C+ G+
Sbjct: 106 DLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGL 165
Query: 198 QIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDL--ASRVFSNIQLPDLTAWSALIGGY 253
I + + K FD V +G LI+++ K LD+ A VF +Q +L W+ +I Y
Sbjct: 166 AIFAFLLKTGY-FDSHVCVGCALIDMFTK-GGLDIQSARMVFDKMQHKNLVTWTLMITRY 223
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+QLG +A+DLF ++ S P + T + +L A +++ G+QLHS +I+ G +S
Sbjct: 224 SQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDV 283
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
FV T++D Y+K +E S K F+ M H+V+SW ALI+G++ S EAI+L +ML
Sbjct: 284 FVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHG 343
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN +T+S++L + +P GKQ H +K G + +G++L++MYA+ G + A
Sbjct: 344 HVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECA 403
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
RK F+ L KNL+S+NT A+ E+ ++ + + T+ +LS I
Sbjct: 404 RKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYACLLSGAACI 461
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G + +G +++I G + +++ +++ G A + N + W
Sbjct: 462 GTIVKG-EQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYR-NVITWTS 519
Query: 554 LLSGCKTH 561
++SG H
Sbjct: 520 IISGFAKH 527
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 163/318 (51%), Gaps = 7/318 (2%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI--QL 240
+L AC GNL++G +H + L D + LI LY+KC + A +F N+
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG---LMPSEVTFSYVLGAFADVKETIGG 297
DL +WSA+I +A A+ F+ M + P+E F+ +L + ++ G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164
Query: 298 RQLHSLIIKMG-FSSFTFVANTVLDFYSKCEL-LEESLKTFDEMDEHDVVSWNALIAGHL 355
+ + ++K G F S V ++D ++K L ++ + FD+M ++V+W +I +
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+A++L +L + P+ +T +++L+ ++ GKQ H +++ G S+V
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF 284
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+G LVDMYAK + ++RK+F+ + N++SW ++ GY Q +EA++++ M
Sbjct: 285 VGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGH 344
Query: 476 IKPNDNTFIGVLSACVHI 493
+ PN TF VL AC +
Sbjct: 345 VTPNCFTFSSVLKACASL 362
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/642 (33%), Positives = 364/642 (56%), Gaps = 9/642 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL M+V+F + +A +F M ER++ SW+ L+ G+++ G + AL + ++ +
Sbjct: 73 NALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIR 132
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT+ + +CA D G+E+H + R +++ V N LI MY KCG + SA+ +
Sbjct: 133 PDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARML 192
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD R+ ISW +++S Y + E + GL++F R+ + + SV+ AC +LG+
Sbjct: 193 FDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDE 252
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G Q+HS V + A + + V LI +Y A VFS ++ D+ +W+ +I G
Sbjct: 253 RLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGC 312
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+A++ + M +G MP EVT + VL A A + + G +LH L + G +
Sbjct: 313 VDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYV 372
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
VAN+++D YSKC+ +E++L+ F ++ + DV+SW ++I G + EA+ + M+ +
Sbjct: 373 VVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILK 432
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN T + L+ + + A+ GK+ H +K G + + +A++D+Y +CGR+ A
Sbjct: 433 SK-PNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTA 491
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
F+ L+ K++ +WN +L GYAQ G G +E++ M E++I P+D TFI +L AC
Sbjct: 492 LNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRS 550
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G+V EG YF M ++ I+P + H A VV L G+ A+EFI+ PI+P+ +W
Sbjct: 551 GMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGA 610
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL+ C+ H+ ++LG AA+ I D E +I+L N+YA++ WDE AKVR+ MKE+ L
Sbjct: 611 LLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGL 670
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
D GCSW E++ K+H F G + H M +++V L
Sbjct: 671 IVDPGCSWVEVKGKVHAF-------LSGDNFHPQMQEINVVL 705
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 220/449 (48%), Gaps = 4/449 (0%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F +V N L+ MYVK + A+ LFD+MP R+ ISW+A+ISG+ + L F
Sbjct: 166 FDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFF 225
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M ++P+ T +SAC GD R G ++H + R+ + N V N LI MY G
Sbjct: 226 RMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVG 285
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
A+ VF R+ +SW +++S L+ + +G E + ASVL
Sbjct: 286 HWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLS 345
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
ACA LG L +GM++H L + VA LI++Y+KC++++ A +F I D+ +
Sbjct: 346 ACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVIS 405
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+++I G + EA+ F KM P+ VT L A A V + G+++H+ +
Sbjct: 406 WTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCGKEIHAHAL 464
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K G F+ N +LD Y +C + +L F+ ++E DV +WN L+ G+ +E
Sbjct: 465 KAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVME 523
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFDSNVVIGSALVDMY 424
L K M+ P+ T+ ++L S + G + + V N+ + +VD+
Sbjct: 524 LFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLL 583
Query: 425 AKCGRLNDARKVFDHLSSK-NLVSWNTML 452
+ G+LN+A + + + K + W +L
Sbjct: 584 GRAGKLNEAHEFIERMPIKPDPAIWGALL 612
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 207/417 (49%), Gaps = 2/417 (0%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLINMYGKCGLLSSAQFVFDAS 137
+V + C ++ G+ + + S + L S + N L++M+ + G + +A VF
Sbjct: 36 FVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRM 95
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
ER+ SW L+ Y + G L ++ +G+ ++ SVL +CA +L G
Sbjct: 96 GERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGR 155
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
++H+ V + + D V LI +Y KC + A +F + D +W+A+I GY +
Sbjct: 156 EVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFEND 215
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+ E ++LF +M + P +T + V+ A + + G QLHS +++ + V N
Sbjct: 216 ECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYN 275
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
+++ Y +E+ F M+ DVVSW +I+G + + +A+E K M G P
Sbjct: 276 SLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMP 335
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ T +++L+ + + ++ G + H + G VV+ ++L+DMY+KC R+ A ++F
Sbjct: 336 DEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIF 395
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+ K+++SW +++ G + EAL + M K KPN T I LSAC +G
Sbjct: 396 HQIPDKDVISWTSVINGLRINNRCFEALIFFRKMIL-KSKPNSVTLISALSACARVG 451
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 151/290 (52%), Gaps = 8/290 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ + + N+ YN L+ MY+ +A+ +F M R+V+SW+ +ISG +P+ A
Sbjct: 262 VVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKA 321
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L ++ M P+ T +SACAS G G ++H R+G L V+N LI+M
Sbjct: 322 LETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDM 381
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSY---CQCGEHVHGLKIFLLSRKSGVAISE 177
Y KC + A +F +++ ISW S+++ +C E + + +L K +
Sbjct: 382 YSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSKP----NS 437
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ S L ACA +G L G +IH+ K + FD F+ +++LY +C ++ A F N
Sbjct: 438 VTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQF-N 496
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ D+ AW+ L+ GYAQ GK ++LF +M S + P +VTF +L A
Sbjct: 497 LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCA 546
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/647 (33%), Positives = 361/647 (55%), Gaps = 2/647 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL M+V+F + DA +F +M ER+V SW+ L+ G+++ G + ALN + M+ +
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN YT+ + CA D GKEIH + R G E + V N LI MY KCG +S+A+ +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD +R+ ISW +++S Y + G + GL++F + R+ V + +V AC +L N
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNE 315
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G +H V K D + LI +Y+ +L+ A VFS ++ D+ +W+A+I
Sbjct: 316 RLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASL 375
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+A++ + M G++P E+T VL A A + G +LH + IK G S
Sbjct: 376 VSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHV 435
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V+N+++D YSKC+ ++ +L+ F + +VVSW +LI G + EA+ + M E
Sbjct: 436 IVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK-E 494
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN T ++L+ + I A+ GK+ H ++ G + + +A++DMY +CGR A
Sbjct: 495 SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPA 554
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
F+ K++ +WN +L GYAQ G + A+E++ M E +I P++ TFI +L AC
Sbjct: 555 LNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKS 613
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G+V EG YFN M + ++P + H A VV + GQ AY+FI+ PI P+ +W
Sbjct: 614 GMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGA 673
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL+ C+ H+++ LG AA+++ D + +I+L N+YA WD+ +KVR +M+E+ L
Sbjct: 674 LLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGL 733
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
D GCSW E++ K+H F + + Q +++ V++ + + G+
Sbjct: 734 SADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGF 780
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 154/562 (27%), Positives = 263/562 (46%), Gaps = 13/562 (2%)
Query: 55 GMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
G E A+ M+ +E Y+ + C R G ++ + S L +
Sbjct: 76 GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N L++M+ + G L A +VF ER+ SW L+ Y + G L ++ + +
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ ++ SVL CA + ++ G +IH+ V + E D V LI +Y KC + A +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F + D +W+A+I GY + G E ++LF M + P +T + V A +
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNE 315
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
GR +H ++K F + N+++ YS LEE+ F M+ DVVSW A+IA
Sbjct: 316 RLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASL 375
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
++ +A+E K M EG P+ T ++L+ + I ++ G + H +K G S+V
Sbjct: 376 VSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHV 435
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
++ ++L+DMY+KC +++A +VF ++S KN+VSW ++++G + EAL + M+E+
Sbjct: 436 IVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES 495
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEG----WHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
+KPN T I VLSAC IG + G H + + G P +++ ++ G
Sbjct: 496 -MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPN-----AILDMYVRCG 549
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD-PEDTSAHIMLS 589
+ A S + + W LL+G L +K+L + D I L
Sbjct: 550 RKVPALNQFNSQ--KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLL 607
Query: 590 NVYAEANMWDETAKVRKIMKEK 611
+++ M E + IMK K
Sbjct: 608 CACSKSGMVTEGLEYFNIMKNK 629
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 229/436 (52%), Gaps = 7/436 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +V N L+ MYVK I++A+ LFD+MP+R+ ISW+A+ISG+ + G
Sbjct: 224 VIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEG 283
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F +M ++P+ T SAC + R G+ +HG + +S + ++N LI M
Sbjct: 284 LELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQM 343
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G L A+ VF ++ +SW ++++S ++ + + G+ E +
Sbjct: 344 YSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITL 403
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL ACA +G+L +G+++H + K L V+ LI++Y+KC+ +D A VF NI
Sbjct: 404 VSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISG 463
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W++LI G ++ EA+ LF + + P+ VT VL A A + + G+++
Sbjct: 464 KNVVSWTSLILGLRINNRSFEAL-LFFRQMKESMKPNSVTLISVLSACARIGALMRGKEI 522
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++ G F+ N +LD Y +C +L F+ + DV +WN L+ G+
Sbjct: 523 HAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQA 581
Query: 361 GEAIELLKDML-FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD--SNVVIG 417
A+EL ML E H P+ T+ ++L S + G + + I+K ++ N+
Sbjct: 582 KLAVELFDKMLELEIH-PDEITFISLLCACSKSGMVTEGLE-YFNIMKNKYNLTPNLKHY 639
Query: 418 SALVDMYAKCGRLNDA 433
+ +VD+ + G+L+DA
Sbjct: 640 ACVVDILGRAGQLDDA 655
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/647 (33%), Positives = 361/647 (55%), Gaps = 2/647 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL M+V+F + DA +F +M ER+V SW+ L+ G+++ G + ALN + M+ +
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN YT+ + CA D GKEIH + R G E + V N LI MY KCG +S+A+ +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD +R+ ISW +++S Y + G + GL++F + R+ V + +V AC +L N
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNE 315
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G +H V K D + LI +Y+ +L+ A VFS ++ D+ +W+A+I
Sbjct: 316 RLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASL 375
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+A++ + M G++P E+T VL A A + G +LH + IK G S
Sbjct: 376 VSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHV 435
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V+N+++D YSKC+ ++ +L+ F + +VVSW +LI G + EA+ + M E
Sbjct: 436 IVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK-E 494
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN T ++L+ + I A+ GK+ H ++ G + + +A++DMY +CGR A
Sbjct: 495 SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPA 554
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
F+ K++ +WN +L GYAQ G + A+E++ M E +I P++ TFI +L AC
Sbjct: 555 LNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKS 613
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G+V EG YFN M + ++P + H A VV + GQ AY+FI+ PI P+ +W
Sbjct: 614 GMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGA 673
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL+ C+ H+++ LG AA+++ D + +I+L N+YA WD+ +KVR +M+E+ L
Sbjct: 674 LLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGL 733
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
D GCSW E++ K+H F + + Q +++ V++ + + G+
Sbjct: 734 SADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGF 780
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 154/562 (27%), Positives = 263/562 (46%), Gaps = 13/562 (2%)
Query: 55 GMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
G E A+ M+ +E Y+ + C R G ++ + S L +
Sbjct: 76 GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N L++M+ + G L A +VF ER+ SW L+ Y + G L ++ + +
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ ++ SVL CA + ++ G +IH+ V + E D V LI +Y KC + A +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F + D +W+A+I GY + G E ++LF M + P +T + V A +
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNE 315
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
GR +H ++K F + N+++ YS LEE+ F M+ DVVSW A+IA
Sbjct: 316 RLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASL 375
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
++ +A+E K M EG P+ T ++L+ + I ++ G + H +K G S+V
Sbjct: 376 VSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHV 435
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
++ ++L+DMY+KC +++A +VF ++S KN+VSW ++++G + EAL + M+E+
Sbjct: 436 IVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES 495
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEG----WHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
+KPN T I VLSAC IG + G H + + G P +++ ++ G
Sbjct: 496 -MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPN-----AILDMYVRCG 549
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD-PEDTSAHIMLS 589
+ A S + + W LL+G L +K+L + D I L
Sbjct: 550 RKVPALNQFNSQ--KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLL 607
Query: 590 NVYAEANMWDETAKVRKIMKEK 611
+++ M E + IMK K
Sbjct: 608 CACSKSGMVTEGLEYFNIMKNK 629
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 229/436 (52%), Gaps = 7/436 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +V N L+ MYVK I++A+ LFD+MP+R+ ISW+A+ISG+ + G
Sbjct: 224 VIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEG 283
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F +M ++P+ T SAC + R G+ +HG + +S + ++N LI M
Sbjct: 284 LELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQM 343
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G L A+ VF ++ +SW ++++S ++ + + G+ E +
Sbjct: 344 YSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITL 403
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL ACA +G+L +G+++H + K L V+ LI++Y+KC+ +D A VF NI
Sbjct: 404 VSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISG 463
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W++LI G ++ EA+ LF + + P+ VT VL A A + + G+++
Sbjct: 464 KNVVSWTSLILGLRINNRSFEAL-LFFRQMKESMKPNSVTLISVLSACARIGALMRGKEI 522
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++ G F+ N +LD Y +C +L F+ + DV +WN L+ G+
Sbjct: 523 HAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQA 581
Query: 361 GEAIELLKDML-FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD--SNVVIG 417
A+EL ML E H P+ T+ ++L S + G + + I+K ++ N+
Sbjct: 582 KLAVELFDKMLELEIH-PDEITFISLLCACSKSGMVTEGLE-YFNIMKNKYNLTPNLKHY 639
Query: 418 SALVDMYAKCGRLNDA 433
+ +VD+ + G+L+DA
Sbjct: 640 ACVVDILGRAGQLDDA 655
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/663 (30%), Positives = 369/663 (55%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G + + L+ ++ K+ IN+A ++F+ + ++ + ++ G+++ E A
Sbjct: 72 VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETA 131
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L + M ++P Y + + C D + GKEIHG++ + N ++NM
Sbjct: 132 LAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNM 191
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + A +FD ER+ +SW ++++ + Q G L++ L + G +
Sbjct: 192 YAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITL 251
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL A A +G L VG IH + ++ L ++Y+KC ++ A +F +
Sbjct: 252 VTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQ 311
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W++++ GY Q G+ +AI +F KM G+ P+ VT L A AD+ + G+ +
Sbjct: 312 KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFV 371
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + ++ S V N+++ YSKC+ ++ + F+ ++ VSWNA+I G+ +
Sbjct: 372 HKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRV 431
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ +M G P+ +T +++ +++ K H I++ D N+ + +AL
Sbjct: 432 SEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTAL 491
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMY+KCG ++ ARK+FD +S +++++WN M+ GY HGLGR AL+++ M++ ++PND
Sbjct: 492 VDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPND 551
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
T++ V+SAC H GLV+EG +F SM +D+G+ P MDH ++V L G+ + A++FI+
Sbjct: 552 ITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIE 611
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+ PI P V+ +L CK HK++ +G AA+K+ +P++ H++L+N+YA + W +
Sbjct: 612 NMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSK 671
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
A+VRK M++K LKK GCS EL+N++H F + Q ++ + +L + GY
Sbjct: 672 VAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGY 731
Query: 661 VPD 663
VPD
Sbjct: 732 VPD 734
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 158/302 (52%)
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
QI LV K L + L++L++K ++ A+RVF I + ++ GYA+
Sbjct: 67 QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNS 126
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
A+ +M + P F+Y+L D + G+++H +I F++ F
Sbjct: 127 SLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMT 186
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
V++ Y+KC ++++ K FD M E D+VSWN +IAG + +A+EL+ M EG P
Sbjct: 187 GVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRP 246
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ T +L ++D+ + GK H ++ GF V I +AL DMY+KCG + AR +F
Sbjct: 247 DSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIF 306
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D + K +VSWN+M+ GY Q+G +A+ ++ M E I P T + L AC +G +E
Sbjct: 307 DGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLE 366
Query: 498 EG 499
G
Sbjct: 367 RG 368
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/663 (33%), Positives = 376/663 (56%), Gaps = 7/663 (1%)
Query: 11 ITYNHLLLMYVKFSRINDAQKLFDEMPER--NVISWSALISGFSQIGMPEVALNYFRLMV 68
+ + L+ +Y+ S + A+ +FD+MP R NV+ W+ LI ++ G E A++ + M+
Sbjct: 52 VPFEKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKML 111
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ PN +T+ + AC++ +A G+EIH + R LE N +VS L++ Y KCG L
Sbjct: 112 GYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLD 171
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ VFD +R+ ++W S++S + + L+ ++ V+ + + VL A A
Sbjct: 172 DAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVA 231
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWS 247
+ +L+ G +IH + D V G++++Y KC+ +D A R+F + + + WS
Sbjct: 232 QVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWS 291
Query: 248 ALIGGYAQLGKACEAIDLFVKMF---SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
A++G Y EA++LF ++ ++ S VT + V+ A++ + G LH
Sbjct: 292 AMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYA 351
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK GF V NT+L Y+KC ++ +++ F+EMD D VS+ A+I+G++ + + E +
Sbjct: 352 IKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGL 411
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+ +M G P T +++L + + + +G +HC + GF ++ +I +AL+DMY
Sbjct: 412 RMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMY 471
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG+++ ARKVFD + + +VSWNTM++ Y HG+G EAL ++ MQ +KP+D TFI
Sbjct: 472 AKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFI 531
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
++SAC H GLV EG ++FN+M +D GI PRM+H A +V L + G + + FI+ P+
Sbjct: 532 CLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPL 591
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP+ VW LLS C+ +K++ LG ++KI PE T ++LSN+Y+ WD+ A+V
Sbjct: 592 EPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQV 651
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRF-AQFQGIDLHEVMNQLSVHLFDGGYVPD 663
R KE+ +K GCSW E+ +H F + + Q + +++L V + GY +
Sbjct: 652 RFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAE 711
Query: 664 PIY 666
Y
Sbjct: 712 SSY 714
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 211/399 (52%), Gaps = 12/399 (3%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFS--QIGMPEVALNYFRL 66
NV L+ Y K ++DA+++FD+M +R+V++W+++ISGFS + EVA RL
Sbjct: 153 NVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVA----RL 208
Query: 67 MVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+V + PN T VG + A A R GKEIHG R G + V ++++YGKC
Sbjct: 209 LVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKC 268
Query: 125 GLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIF---LLSRKSGVAISEFSC 180
+ A+ +FD + +N ++W +++ +Y C L++F L+ + + +S +
Sbjct: 269 QCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTL 328
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+V+ CA L +L G +H K D V L+++YAKC ++ A R F+ + L
Sbjct: 329 ATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDL 388
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +++A+I GY Q G + E + +F++M SG+ P + T + VL A A + G
Sbjct: 389 RDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCS 448
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H I GF++ T + N ++D Y+KC ++ + K FD M + +VSWN +I +
Sbjct: 449 HCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIG 508
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
EA+ L +M EG P+ T+ +++ S + GK
Sbjct: 509 LEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGK 547
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 181/371 (48%), Gaps = 10/371 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQIGMPEVA 60
+ GF +V+ +L +Y K I+ A+++FD M +N ++WSA++ + A
Sbjct: 247 VRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREA 306
Query: 61 LNYFRLMVCC---VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
L F ++ V+ + T + CA+ D +G +H +SG L+ V N L
Sbjct: 307 LELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTL 366
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
++MY KCG+++ A F+ R+++S+ +++S Y Q G GL++FL + SG+ +
Sbjct: 367 LSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEK 426
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ ASVL ACA L L G H C D + LI++YAKC K+D A +VF
Sbjct: 427 ATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDR 486
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ + +W+ +I Y G EA+ LF M S GL P +VTF ++ A + G
Sbjct: 487 MHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEG 546
Query: 298 RQ-LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHL 355
+ +++ G ++D S+ L +E ++M E DV W AL L
Sbjct: 547 KYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGAL----L 602
Query: 356 ASCHYGEAIEL 366
++C + +EL
Sbjct: 603 SACRVYKNVEL 613
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/683 (34%), Positives = 372/683 (54%), Gaps = 29/683 (4%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N L+ MY K I D K+FD + +R+ +SW++ I+ + E AL FR M
Sbjct: 127 SVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQ 186
Query: 69 CCVLEPNYYTYVGAVSACASRG---DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
+E + +T V AC++ G R GK++HG R G + + +N L+ MY K G
Sbjct: 187 MENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLG 245
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ ++ +F++ ++R+ +SW +++SS+ Q L F L GV + + ASVL
Sbjct: 246 RVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLP 305
Query: 186 ACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC+ L L VG +IH+ V + L + FV L+++Y C +++ RVF +I +
Sbjct: 306 ACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIE 365
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W+A+I GYA+ G +A+ LF++M +GL+P+ T + V+ A + +H
Sbjct: 366 LWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGY 425
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+K+GF +V N ++D YS+ ++ S FD M+ D VSWN +I G++ S Y A
Sbjct: 426 AVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNA 485
Query: 364 IELLKDMLFEGHC-----------------PNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
+ LL +M + PN T +L + + AI GK+ H +
Sbjct: 486 LVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAI 545
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
+ S++ +GSALVDMYAKCG LN +R+VF+ + +KN+++WN +++ HG G EALE
Sbjct: 546 RNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALE 605
Query: 467 IYSMM-----QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
++ M + + KPN+ TFI V +AC H GL+ EG + F M DHG+ P DH A
Sbjct: 606 LFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYAC 665
Query: 522 VVHLFACRGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPE 580
VV L GQ AYE + + P E +KV W LL C+ H+++ LG AA+ +L +P
Sbjct: 666 VVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPN 725
Query: 581 DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQ 640
S +++LSN+Y+ A +W++ +VRK M++ +KK+ GCSW E ++++H F + Q
Sbjct: 726 VASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQ 785
Query: 641 GIDLHEVMNQLSVHLFDGGYVPD 663
LH + LS + GYVPD
Sbjct: 786 SEQLHGFLETLSEKMRKEGYVPD 808
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 184/372 (49%), Gaps = 7/372 (1%)
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L+S S R++ SWV L S + + + ++ SG F+ +VL A
Sbjct: 42 LTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKA 101
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKF-VAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
+ L +LK G QIH+ K VA L+N+Y KC + +VF I D +
Sbjct: 102 VSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVS 161
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG---GRQLHS 302
W++ I + K +A++ F M + S T V A +++ G G+QLH
Sbjct: 162 WNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHG 221
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
+++G TF N ++ Y+K +++S F+ + D+VSWN +I+ S + E
Sbjct: 222 YSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSE 280
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSALV 421
A+ + M+ EG + T +++L S + ++ GK+ H +++ N +GSALV
Sbjct: 281 ALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALV 340
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPND 480
DMY C ++ R+VFDH+ + + WN M+ GYA++GL +AL ++ M++ + PN
Sbjct: 341 DMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNT 400
Query: 481 NTFIGVLSACVH 492
T V+ ACVH
Sbjct: 401 TTMASVMPACVH 412
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 156/304 (51%), Gaps = 12/304 (3%)
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF-SSFTFVANTV 319
EAI +++M SG P F VL A + +++ G Q+H+ +K G+ SS VANT+
Sbjct: 75 EAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTL 134
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
++ Y KC + + K FD + + D VSWN+ IA + +A+E + M E +
Sbjct: 135 VNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSS 194
Query: 380 YTYSNILNISSDIP---AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
+T ++ S++ + GKQ H ++ G D +AL+ MYAK GR++D++ +
Sbjct: 195 FTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKAL 253
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
F+ +++VSWNTM+ ++Q EAL + +M ++ + T VL AC H+ +
Sbjct: 254 FESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERL 313
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRG--QTRRAYEFIKSSPIEPNKVVWRC 553
+ G ++R++ + +++V ++ CR RR ++ I IE +W
Sbjct: 314 DVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIE----LWNA 369
Query: 554 LLSG 557
++SG
Sbjct: 370 MISG 373
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Query: 344 VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHC 403
SW + S + EAI +M G P+ + + +L S + ++ G+Q H
Sbjct: 57 TASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHA 116
Query: 404 CIVKPGF-DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
VK G+ S+V + + LV+MY KCG + D KVFD ++ ++ VSWN+ + +
Sbjct: 117 AAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWE 176
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
+ALE + MQ ++ + T + V AC ++G++
Sbjct: 177 QALEAFRAMQMENMELSSFTLVSVALACSNLGVM 210
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/664 (33%), Positives = 371/664 (55%), Gaps = 3/664 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEM-PERNVISWSALISGFSQIGMPEVA 60
+ +GF +V N L+ MY F ++DA+++F+E ERN +SW+ L+S + + A
Sbjct: 127 MATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDA 186
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F MV ++P + + V+AC + +G+++H + R G + + +N L++M
Sbjct: 187 IQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDM 246
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A +F+ + + +SW +L+S G +++ L + SG+ + F+
Sbjct: 247 YMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTL 306
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L AC+ G +G QIH + K + D ++ +GL+++YAK LD A +VF +
Sbjct: 307 SSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFH 366
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL +ALI G + G+ EA+ LF ++ GL + T + VL + A ++ RQ+
Sbjct: 367 RDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQV 426
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+L +K+GF V N ++D Y KC L ++ + F+E D+++ ++I L+ C +
Sbjct: 427 HALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITA-LSQCDH 485
Query: 361 GE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
GE AI+L +ML +G P+ + S++LN + + A E GKQ H ++K F S+ G+A
Sbjct: 486 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA 545
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LV YAKCG + DA F L + +VSW+ M+ G AQHG G+ ALE++ M + I PN
Sbjct: 546 LVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPN 605
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
T VL AC H GLV+E YFNSM GI +H + ++ L G+ A E +
Sbjct: 606 HITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELV 665
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
S P + N +W LL + HKD LG+ AAEK+ +PE + H++L+N YA A MW+
Sbjct: 666 NSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWN 725
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
E AKVRK+MK+ ++KK+ SW E+++K+H F + +++ + +L + G
Sbjct: 726 EVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAG 785
Query: 660 YVPD 663
+VP+
Sbjct: 786 FVPN 789
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 192/617 (31%), Positives = 315/617 (51%), Gaps = 43/617 (6%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM----VC 69
NHL+ Y K R A++ FDE+P+ +SWS+L++ +S G+P A+ F M VC
Sbjct: 41 NHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
C N + + V C DAR G ++H +G + V+N L+ MYG G +
Sbjct: 101 C----NEFA-LPVVLKCVP--DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDD 153
Query: 130 AQFVF-DASLERNSISWVSLLSSYC---QCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
A+ VF +A ERN++SW L+S+Y QCG+ +++F SG+ +EF + V+
Sbjct: 154 ARRVFNEADSERNAVSWNGLMSAYVKNDQCGD---AIQVFGEMVWSGIQPTEFGFSCVVN 210
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
AC N++ G Q+H++V + + D F A L+++Y K ++D+AS +F + D+ +
Sbjct: 211 ACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVS 270
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ALI G G AI+L ++M SGL+P+ T S +L A + GRQ+H +I
Sbjct: 271 WNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMI 330
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K S ++ ++D Y+K L+++ K FD M D++ NALI+G + EA+
Sbjct: 331 KANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALS 390
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG--FDSNVVIGSALVDM 423
L ++ EG N T + +L ++ + A +Q H VK G FD++VV G L+D
Sbjct: 391 LFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNG--LIDS 448
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y KC L+DA +VF+ SS ++++ +M+ +Q G A++++ M ++P+
Sbjct: 449 YWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA--SVVHLFACRGQTRRAYEFIKS 541
+L+AC + E+G +I+ +S D A ++V+ +A G A E S
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMS---DAFAGNALVYTYAKCGSIEDA-ELAFS 564
Query: 542 SPIEPNKVVWRCLLSGCKTH----KDLVL-GRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
S E V W ++ G H + L L GR E I +P HI +++V N
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGI---NPN----HITMTSVLCACN 617
Query: 597 ---MWDETAKVRKIMKE 610
+ DE + MKE
Sbjct: 618 HAGLVDEAKRYFNSMKE 634
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 146/480 (30%), Positives = 238/480 (49%), Gaps = 5/480 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ +V T N L+ MY+K R++ A +F++MP+ +V+SW+ALISG G A
Sbjct: 228 VVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRA 287
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M L PN +T + AC+ G G++IHG M ++ + + ++ L++M
Sbjct: 288 IELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 347
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K L A+ VFD R+ I +L+S G H L +F RK G+ ++ +
Sbjct: 348 YAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTL 407
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+VL + A L Q+H+L K FD V GLI+ Y KC L A+RVF
Sbjct: 408 AAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSS 467
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ A +++I +Q AI LF++M GL P S +L A A + G+Q+
Sbjct: 468 GDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 527
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK F S F N ++ Y+KC +E++ F + E VVSW+A+I G H
Sbjct: 528 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 587
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
A+EL M+ EG PN T +++L + ++ K+ + + G D S
Sbjct: 588 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 647
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQENK 475
++D+ + G+L+DA ++ + + N W +L H LG+ A E +++ K
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEK 707
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/683 (33%), Positives = 370/683 (54%), Gaps = 29/683 (4%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N L+ MY K + A+++FD++P+R+ +SW+++I+ + E++L+ FRLM+
Sbjct: 366 SVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLML 425
Query: 69 CCVLEPNYYTYVGAVSACAS-RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
++P +T V AC+ RG R GK++H R+G +L ++ +N L+ MY + G +
Sbjct: 426 SENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRV 484
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+ A+ +F ++ +SW +++SS Q L L GV + ASVL AC
Sbjct: 485 NDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPAC 544
Query: 188 AVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
+ L L++G +IH + L + FV L+++Y C++ VF + + W
Sbjct: 545 SQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVW 604
Query: 247 SALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
+AL+ GYA+ +A+ LFV+M S S P+ TF+ VL A K +H I+
Sbjct: 605 NALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIV 664
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K GF +V N ++D YS+ +E S F M++ D+VSWN +I G + Y +A+
Sbjct: 665 KRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALN 724
Query: 366 LLKDML-------------FEGHC-----PNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
LL +M +E PN T +L + + A+ GK+ H VK
Sbjct: 725 LLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVK 784
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
+V +GSALVDMYAKCG LN A +VFD + +N+++WN +++ Y HG G EALE+
Sbjct: 785 QKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALEL 844
Query: 468 YSMM------QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
+ +M I+PN+ T+I + +AC H G+V+EG H F++M HG+ PR DH A
Sbjct: 845 FRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYAC 904
Query: 522 VVHLFACRGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPE 580
+V L G+ + AYE I + P NKV W LL C+ H+ + G AA+ + +P
Sbjct: 905 LVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPN 964
Query: 581 DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQ 640
S ++++SN+Y+ A +WD+ VRK MKE ++K+ GCSW E +++H F + + Q
Sbjct: 965 VASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQ 1024
Query: 641 GIDLHEVMNQLSVHLFDGGYVPD 663
+LHE + LS + GYVPD
Sbjct: 1025 SKELHEYLETLSQRMRKEGYVPD 1047
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 244/508 (48%), Gaps = 26/508 (5%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH--VSNCLINMYGKCGLLSSAQFVF 134
+ + + A A+ D GK+IH +++ G S V+N L+NMYGKCG L++A+ VF
Sbjct: 331 FAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVF 390
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA-VLGNL 193
D +R+ +SW S++++ C+ E L +F L V + F+ SV AC+ V G +
Sbjct: 391 DDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGV 450
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G Q+H+ + + + L+ +YA+ +++ A +F DL +W+ +I
Sbjct: 451 RLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSL 509
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG-FSSF 312
+Q + EA+ M G+ P VT + VL A + ++ GR++H ++ G
Sbjct: 510 SQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIEN 569
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+FV ++D Y C+ ++ FD + V WNAL+AG+ + +A+ L +M+
Sbjct: 570 SFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMIS 629
Query: 373 EGH-CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
E CPN T++++L + H IVK GF + + +AL+DMY++ GR+
Sbjct: 630 ESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVE 689
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK---------------- 475
++ +F ++ +++VSWNTM+ G G +AL + MQ +
Sbjct: 690 ISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGG 749
Query: 476 --IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
KPN T + VL C + + +G ++ ++ + +++V ++A G
Sbjct: 750 VPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVK-QKLAMDVAVGSALVDMYAKCGCLN 808
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
A PI N + W L+ H
Sbjct: 809 LASRVFDQMPIR-NVITWNVLIMAYGMH 835
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 213/443 (48%), Gaps = 24/443 (5%)
Query: 138 LERNSIS-WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
+ER S S W+ LL S + + + F+ +VL A A + +L +G
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349
Query: 197 MQIHSLVFKC--ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
QIH+ VFK A VA L+N+Y KC L A +VF +I D +W+++I
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQLHSLIIKMGFSSFT 313
+ + ++ LF M S + P+ T V A + V+ + G+Q+H+ ++ G T
Sbjct: 410 RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRT 468
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ N ++ Y++ + ++ F D D+VSWN +I+ + + EA+ + M+ +
Sbjct: 469 YTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVD 528
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSALVDMYAKCGRLND 432
G P+ T +++L S + + G++ HC ++ G N +G+ALVDMY C +
Sbjct: 529 GVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKK 588
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACV 491
R VFD + + + WN +L GYA++ +AL ++ M+ E++ PN TF VL ACV
Sbjct: 589 GRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACV 648
Query: 492 HIGLV--EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK- 548
+ +EG H + I G +++ +++ G+ E K+ NK
Sbjct: 649 RCKVFSDKEGIHGY---IVKRGFGKDKYVQNALMDMYSRMGRV----EISKTIFGRMNKR 701
Query: 549 --VVWRCLLSGCKTHKDLVLGRY 569
V W +++GC +V GRY
Sbjct: 702 DIVSWNTMITGC-----IVCGRY 719
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 127/279 (45%), Gaps = 27/279 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + N L+ MY + R+ ++ +F M +R+++SW+ +I+G G + A
Sbjct: 663 IVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDA 722
Query: 61 LNYFRLMV------------------CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM 102
LN M +PN T + + CA+ GKEIH
Sbjct: 723 LNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYA 782
Query: 103 YRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGL 162
+ L ++ V + L++MY KCG L+ A VFD RN I+W L+ +Y G+ L
Sbjct: 783 VKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEAL 842
Query: 163 KIFLL------SRKSGVAISEFSCASVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVA 215
++F + S + + +E + ++ AC+ G + G+ + H++ +E
Sbjct: 843 ELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHY 902
Query: 216 MGLINLYAKCEKLDLASRVFSNI--QLPDLTAWSALIGG 252
L++L + ++ A + + + L + AWS+L+G
Sbjct: 903 ACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGA 941
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/664 (33%), Positives = 371/664 (55%), Gaps = 3/664 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEM-PERNVISWSALISGFSQIGMPEVA 60
+ +GF +V N L+ MY F ++DA+++F+E ERN +SW+ L+S + + A
Sbjct: 127 MATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDA 186
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F MV ++P + + V+AC + +G+++H + R G + + +N L++M
Sbjct: 187 IQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDM 246
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A +F+ + + +SW +L+S G +++ L + SG+ + F+
Sbjct: 247 YMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTL 306
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L AC+ G +G QIH + K + D ++ +GL+++YAK LD A +VF +
Sbjct: 307 SSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFH 366
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL +ALI G + G+ EA+ LF ++ GL + T + VL + A ++ RQ+
Sbjct: 367 RDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQV 426
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+L +K+GF V N ++D Y KC L ++ + F+E D+++ ++I L+ C +
Sbjct: 427 HALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITA-LSQCDH 485
Query: 361 GE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
GE AI+L +ML +G P+ + S++LN + + A E GKQ H ++K F S+ G+A
Sbjct: 486 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA 545
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LV YAKCG + DA F L + +VSW+ M+ G AQHG G+ ALE++ M + I PN
Sbjct: 546 LVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPN 605
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
T VL AC H GLV+E YFNSM GI +H + ++ L G+ A E +
Sbjct: 606 HITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELV 665
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
S P + N +W LL + HKD LG+ AAEK+ +PE + H++L+N YA A MW+
Sbjct: 666 NSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWN 725
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
E AKVRK+MK+ ++KK+ SW E+++K+H F + +++ + +L + G
Sbjct: 726 EVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAG 785
Query: 660 YVPD 663
+VP+
Sbjct: 786 FVPN 789
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 192/617 (31%), Positives = 316/617 (51%), Gaps = 43/617 (6%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM----VC 69
NHL+ Y K R A+++FDE+P+ +SWS+L++ +S G+P A+ F M VC
Sbjct: 41 NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
C N + + V C DAR G ++H +G + V+N L+ MYG G +
Sbjct: 101 C----NEFA-LPVVLKCVP--DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDD 153
Query: 130 AQFVF-DASLERNSISWVSLLSSYC---QCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
A+ VF +A ERN++SW L+S+Y QCG+ +++F SG+ +EF + V+
Sbjct: 154 ARRVFNEADSERNAVSWNGLMSAYVKNDQCGD---AIQVFGEMVWSGIQPTEFGFSCVVN 210
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
AC N++ G Q+H++V + + D F A L+++Y K ++D+AS +F + D+ +
Sbjct: 211 ACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVS 270
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ALI G G AI+L ++M SGL+P+ T S +L A + GRQ+H +I
Sbjct: 271 WNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMI 330
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K S ++ ++D Y+K L+++ K FD M D++ NALI+G + EA+
Sbjct: 331 KANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALS 390
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG--FDSNVVIGSALVDM 423
L ++ EG N T + +L ++ + A +Q H VK G FD++VV G L+D
Sbjct: 391 LFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNG--LIDS 448
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y KC L+DA +VF+ SS ++++ +M+ +Q G A++++ M ++P+
Sbjct: 449 YWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA--SVVHLFACRGQTRRAYEFIKS 541
+L+AC + E+G +I+ +S D A ++V+ +A G A E S
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMS---DAFAGNALVYTYAKCGSIEDA-ELAFS 564
Query: 542 SPIEPNKVVWRCLLSGCKTH----KDLVL-GRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
S E V W ++ G H + L L GR E I +P HI +++V N
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGI---NPN----HITMTSVLCACN 617
Query: 597 ---MWDETAKVRKIMKE 610
+ DE + MKE
Sbjct: 618 HAGLVDEAKRYFNSMKE 634
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 146/480 (30%), Positives = 238/480 (49%), Gaps = 5/480 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ +V T N L+ MY+K R++ A +F++MP+ +V+SW+ALISG G A
Sbjct: 228 VVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRA 287
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M L PN +T + AC+ G G++IHG M ++ + + ++ L++M
Sbjct: 288 IELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 347
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K L A+ VFD R+ I +L+S G H L +F RK G+ ++ +
Sbjct: 348 YAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTL 407
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+VL + A L Q+H+L K FD V GLI+ Y KC L A+RVF
Sbjct: 408 AAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSS 467
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ A +++I +Q AI LF++M GL P S +L A A + G+Q+
Sbjct: 468 GDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 527
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK F S F N ++ Y+KC +E++ F + E VVSW+A+I G H
Sbjct: 528 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 587
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
A+EL M+ EG PN T +++L + ++ K+ + + G D S
Sbjct: 588 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 647
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQENK 475
++D+ + G+L+DA ++ + + N W +L H LG+ A E +++ K
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEK 707
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/673 (32%), Positives = 389/673 (57%), Gaps = 10/673 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SGF ++ + L+ + ++ ++ A+ +F +M +RN ++ + L+ G ++ E A
Sbjct: 380 SGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKV 439
Query: 64 FRLMVCCVLEPNYYTYVGAVSACAS----RGDARSGKEIHGRMYRSGL-ELNSHVSNCLI 118
F+ M V E N + V +S + R G+E+H ++RSGL + + N L+
Sbjct: 440 FKEMKDLV-EINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALV 498
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
NMYGKC + +A VF ++++SW S++S + F +++G+ S F
Sbjct: 499 NMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNF 558
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S S L +C+ LG L +G QIH FK L+ D V+ L+ LYA+ + ++ +VF +
Sbjct: 559 SVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQM 618
Query: 239 QLPDLTAWSALIGGYAQL-GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
D +W++ IG A+ +A+ F++M +G P+ VTF +L A + G
Sbjct: 619 PEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLG 678
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLA 356
Q+H+LI+K + + N +L FY KCE +E+ F M E D VSWN++I+G+L
Sbjct: 679 HQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLH 738
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
S +A++L+ M+ G + +T++ +L+ + + +E G + H C V+ +S+VV+
Sbjct: 739 SGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVV 798
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
GSALVDMYAKCG+++ A + F+ + +N+ SWN+M+ GYA+HG G++AL+I++ M+++
Sbjct: 799 GSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQ 858
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P+ TF+GVLSAC H+GLV+EG+ +F SM +G+SPR++H + +V L G ++
Sbjct: 859 SPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIE 918
Query: 537 EFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
+FIK+ P++PN ++WR +L C ++ LG+ AA+ ++ +P++ +++LSN++A
Sbjct: 919 DFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAA 978
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
W++ + R M++ ++KKD GCSW +++ +H F + ++E + +L
Sbjct: 979 GGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNK 1038
Query: 655 LFDGGYVPDPIYS 667
+ D GYVP+ Y+
Sbjct: 1039 IRDAGYVPETKYA 1051
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 293/569 (51%), Gaps = 17/569 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+GF +V N L+ +YV+ + A+KLFDEMP++N++SWS LISG++Q MP+ A +
Sbjct: 169 TGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSL 228
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDA--RSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ ++ L PN++ A+ AC G + G +IH + + + +SN L++MY
Sbjct: 229 FKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMY 288
Query: 122 GKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI----S 176
C G + A VFD RNS++W S++S YC+ G+ V K+F + + GV + +
Sbjct: 289 SDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPN 348
Query: 177 EFS-CASVLGACAVLG-NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
E++ C+ V AC++ L + Q+ + + K D +V L+N +A+ +D A +
Sbjct: 349 EYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMI 408
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE--VTFSYVLGAFADVK 292
F + + + L+ G A+ + EA +F +M + SE V F+++K
Sbjct: 409 FKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLK 468
Query: 293 E-TIGGRQLHSLIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
E G+++H+ + + G + + N +++ Y KC ++ + F M D VSWN++
Sbjct: 469 EGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSM 528
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
I+G + + EA+ M G P+ ++ + L+ S + + G+Q H K G
Sbjct: 529 ISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGL 588
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG-REALEIYS 469
D +V + +AL+ +YA+ +N+ +KVF + + VSWN+ + A++ +AL+ +
Sbjct: 589 DLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFL 648
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M + +PN TFI +L+A ++ G H +++I + ++ + I + + F +
Sbjct: 649 EMMQAGWRPNRVTFINILAAVSSFSVLGLG-HQIHALILKYSVADD-NAIENALLAFYGK 706
Query: 530 GQTRRAYEFIKSSPIE-PNKVVWRCLLSG 557
+ E I S E ++V W ++SG
Sbjct: 707 CEQMEDCEIIFSRMSERRDEVSWNSMISG 735
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 220/439 (50%), Gaps = 20/439 (4%)
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
+H ++Y++G + N LIN+Y + G L SA+ +FD ++N +SW L+S Y Q
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRM 221
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN--LKVGMQIHSLVFKCALEFDKFVA 215
+F SG+ + F+ S L AC G+ +K+GMQIH+ + K D ++
Sbjct: 222 PDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILS 281
Query: 216 MGLINLYAKCE-KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG- 273
L+++Y+ C +D A RVF I+ + W+++I Y + G A A LF M G
Sbjct: 282 NVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGV 341
Query: 274 ---LMPSEVTFSYVLGAFADVKE--TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
L P+E T ++ A + + + Q+ + I K GF +V + +++ +++ L
Sbjct: 342 ELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGL 401
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EAIELLKDM--LFEGHCPNLYT-YSN 384
++ + F +M + + V+ N L+ G LA H G EA ++ K+M L E + +L S
Sbjct: 402 MDCAKMIFKQMYDRNAVTMNGLMVG-LARQHQGEEAAKVFKEMKDLVEINSESLVVLLST 460
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGF-DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
S+ G++ H + + G D+ + IG+ALV+MY KC +++A VF + SK
Sbjct: 461 FTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSK 520
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
+ VSWN+M+ G + EA+ + M+ N + P++ + I LS+C + GW
Sbjct: 521 DTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSL-----GWLTL 575
Query: 504 NSMIRDHGISPRMDHIASV 522
I G +D SV
Sbjct: 576 GRQIHGEGFKWGLDLDVSV 594
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 236/706 (33%), Positives = 389/706 (55%), Gaps = 41/706 (5%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF N+ N L+ +YV+ + AQKLFDEM RN+++W+ LISG++Q G P+ A
Sbjct: 126 IKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEAC 185
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDA--RSGKEIHGRMYRSGLELNSHVSNCLIN 119
FR MV PN+Y + A+ AC G + + G +IHG + ++ + V N LI+
Sbjct: 186 ARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLIS 245
Query: 120 MYGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MYG C + A+ VFD RNSISW S++S Y + G+ V +F +K G+ S F
Sbjct: 246 MYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFS-F 304
Query: 179 SCASVLGACAVLGN-LKVGMQIHSLVFKCALEFDKF-VAMGLINLYAKCEKLDLASRVFS 236
+VL + G ++H+ V + L +K + GL+N+YAK + A VF
Sbjct: 305 KPNDAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE 364
Query: 237 NIQLPDLTAWSALIGG-------------------YAQL-------------GKACEAID 264
+ D +W++LI G Y Q+ +A+
Sbjct: 365 LMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVK 424
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
F++M G S VTF +L A + + Q+H+L++K S T + N +L Y
Sbjct: 425 YFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYG 484
Query: 325 KCELLEESLKTFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
KC + E K F M E D VSWN++I+G++ + +A++L+ M+ +G + +T++
Sbjct: 485 KCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFA 544
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
IL+ + + +E G + H C ++ +S+VV+GSALVDMY+KCGR++ A + F+ + +
Sbjct: 545 TILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR 604
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
N+ SWN+M+ GYA+HG G +AL++++ M + P+ TF+GVLSAC H+G VEEG+ +F
Sbjct: 605 NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHF 664
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC--KTH 561
SM + +SPR++H + +V L G+ +FI S P++PN ++WR +L C
Sbjct: 665 KSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANG 724
Query: 562 KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSW 621
++ LGR AAE +L +P++ +++L+N+YA W++ AK R MKE ++KK+ GCSW
Sbjct: 725 RNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSW 784
Query: 622 TELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
+++ +H F + +++ + +L+ + D GY+P Y+
Sbjct: 785 VTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYA 830
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 138/512 (26%), Positives = 239/512 (46%), Gaps = 49/512 (9%)
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
+ +E+H + + G N +SN LIN+Y + G L SAQ +FD RN ++W L+S
Sbjct: 115 SEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 174
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG--NLKVGMQIHSLVFKCALE 209
Y Q G+ F ++G + ++ S L AC G K+G+QIH L+ K
Sbjct: 175 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 234
Query: 210 FDKFVAMGLINLYAKC-EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
D V LI++Y C + + A VF I + + +W+++I Y++ G A A DLF
Sbjct: 235 SDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSS 294
Query: 269 MFSSGLMPSEVTFSY----VLGAFADVKE-TIGGRQLHSLIIKMGFSSFTF-VANTVLDF 322
M GL FS+ F+ ++E GR++H+ +I+ G + + N +++
Sbjct: 295 MQKEGL-----GFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNM 349
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAG----------------------------- 353
Y+K + ++ F+ M E D VSWN+LI+G
Sbjct: 350 YAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVI 409
Query: 354 ---HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
+ +A++ M+ G + T+ NIL+ S + E Q H ++K
Sbjct: 410 GALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCL 469
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ IG+AL+ Y KCG +N+ K+F +S +++ VSWN+M+ GY + L +A+++
Sbjct: 470 SDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVW 529
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M + + + TF +LSAC + +E G IR + + +++V +++
Sbjct: 530 FMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIR-ACLESDVVVGSALVDMYSKC 588
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
G+ A F + P+ N W ++SG H
Sbjct: 589 GRIDYASRFFELMPLR-NVYSWNSMISGYARH 619
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 145/305 (47%), Gaps = 34/305 (11%)
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
++ L S TF ++ + + R+LH IK GF F++NT+++ Y + L
Sbjct: 92 NTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLG 151
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI-- 388
+ K FDEM ++V+W LI+G+ + EA +DM+ G PN Y + + L
Sbjct: 152 SAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQ 211
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC-GRLNDARKVFDHLSSKNLVS 447
S + G Q H I K + S+VV+ + L+ MY C NDAR VFD + +N +S
Sbjct: 212 ESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSIS 271
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKI----KPNDNTFIGVLSACVHIGLVEEGW--- 500
WN+++ Y++ G A +++S MQ+ + KPND A ++EEG
Sbjct: 272 WNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPND--------AFSEFSVLEEGRRKG 323
Query: 501 -----HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA---YEFIKSSPIEPNKVVWR 552
H + + D+ ++ +V+++A G A +E + +E + V W
Sbjct: 324 REVHAHVIRTGLNDNKVAIG----NGLVNMYAKSGAIADACSVFELM----VEKDSVSWN 375
Query: 553 CLLSG 557
L+SG
Sbjct: 376 SLISG 380
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/662 (32%), Positives = 365/662 (55%), Gaps = 28/662 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF N L+ +Y + ++ A+++F M +R+ +S+++LISG +Q G A
Sbjct: 277 VLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRA 336
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ M +P+ T +SACAS G +GK+ H ++G+ + V L+++
Sbjct: 337 LALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDL 396
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + +A F Y Q +IF + G+ ++F+
Sbjct: 397 YVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTY 441
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L C LG +G QIH+ V K +F+ +V+ LI++YAK KLD A ++F ++
Sbjct: 442 PSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKE 501
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+A+I GY Q K EA++LF +M G+ + F+ + A A ++ GRQ+
Sbjct: 502 NDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQI 561
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ G+S + N ++ Y++C + E+ FD++ D VSWN+L++G S ++
Sbjct: 562 HAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYF 621
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ + M G N +T+ + ++ +++I + GKQ H I K G+DS + +AL
Sbjct: 622 EEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNAL 681
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ +YAKCG ++D +SWN+M+ GY+QHG G EAL+++ M++ + PN
Sbjct: 682 ITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNH 728
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+GVLSAC H+GLV+EG YF SM H + P+ +H A VV L G RA F++
Sbjct: 729 VTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVE 788
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
PI+P+ +VWR LLS C HK++ +G +AA +L +P+D++ ++++SN+YA + WD
Sbjct: 789 EMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDC 848
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
+ R++MK++ +KK+ G SW E+ N +H F + ++E + L + GY
Sbjct: 849 RDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGY 908
Query: 661 VP 662
VP
Sbjct: 909 VP 910
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 175/588 (29%), Positives = 296/588 (50%), Gaps = 58/588 (9%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
ITSGF + N L+ +Y K ++ A+K+F+ + R+ +SW A+ISG SQ G E A+
Sbjct: 191 ITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAM 250
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
L+ C ++ +SAC GK++HG + + G ++V N L+ +Y
Sbjct: 251 ----LLFCQIV----------LSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLY 296
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC- 180
+ G LSSA+ +F +R+ +S+ SL+S Q G L +F +K + + C
Sbjct: 297 SRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALF---KKMNLDCQKPDCV 353
Query: 181 --ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
AS+L ACA +G L G Q HS K + D V L++LY KC + A F
Sbjct: 354 TVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFL-- 411
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
Y QL ++ +F +M G++P++ T+ +L + T G
Sbjct: 412 -------------CYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGE 458
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+ ++K GF +V++ ++D Y+K L+ +LK F + E+DVVSW A+IAG+
Sbjct: 459 QIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHD 518
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ EA+ L K+M +G + +++ ++ + I A++ G+Q H G+ ++ IG+
Sbjct: 519 KFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGN 578
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALV +YA+CG++ +A FD + +K+ VSWN+++ G+AQ G EAL I++ M + ++
Sbjct: 579 ALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEI 638
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA----------- 527
N TF +SA +I V G + MIR G + +++ L+A
Sbjct: 639 NSFTFGSAVSAAANIANVRIGKQ-IHGMIRKTGYDSETEVSNALITLYAKCGTIDDISWN 697
Query: 528 ----------CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
C + + +E +K + PN V + +LS C +H LV
Sbjct: 698 SMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSAC-SHVGLV 744
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 146/567 (25%), Positives = 246/567 (43%), Gaps = 77/567 (13%)
Query: 6 FHPNVITYNHLLLM-YVKFSRINDAQKLF----DEMPERNVISWSALISGFSQIGMPEVA 60
FH I NH LL FS ++ + DE+PE+ +++
Sbjct: 17 FHTKPIFNNHKLLCGKFSFSAFSNTALNYAHNDDEIPEKE-----------NEMDGNASG 65
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ Y LM + N T++ + C ++ R + GL+L I+
Sbjct: 66 IGYLHLMEQHGVRANSQTFLWLLEGC-----------LNSRSFYDGLKL--------IDF 106
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR--KSGVAISEF 178
Y G L+ A VFD R+ W + +++ E + G L R V E
Sbjct: 107 YLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFI--AERLMGRVPGLFRRMLTKNVEFDER 164
Query: 179 SCASVLGACAVLGN---LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
A VL C+ GN + QIH+ E F+ LI+LY K L A +VF
Sbjct: 165 IFAVVLRGCS--GNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 222
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
N++ D +W A+I G +Q G EA+ LF ++ VL A V+
Sbjct: 223 ENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFE 268
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+QLH L++K GFSS T+V N ++ YS+ L + + F M + D VS+N+LI+G
Sbjct: 269 FGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLA 328
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+ A+ L K M + P+ T +++L+ + + A+ GKQ H +K G S++V
Sbjct: 329 QQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIV 388
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ +L+D+Y KC + A + F + Y Q ++ +I++ MQ
Sbjct: 389 VEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEG 433
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
I PN T+ +L C +G + G +++ G + + ++ ++A G+ A
Sbjct: 434 IVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKHGKLDHA 492
Query: 536 YEFIKSSPIEPNKVV-WRCLLSGCKTH 561
+ + ++ N VV W +++G H
Sbjct: 493 LKIFRR--LKENDVVSWTAMIAGYTQH 517
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/647 (34%), Positives = 342/647 (52%), Gaps = 69/647 (10%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERN---- 141
C +R + +HGR+ ++ + N LI++YGKCG L A+ VFD ERN
Sbjct: 34 CVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSF 93
Query: 142 ---------------------------SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
SW S+++ + Q L F+ +
Sbjct: 94 NSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFV 153
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
++++S S L AC+ L +LK+G QIH L+ K D F+ GLI+ Y+KC + A RV
Sbjct: 154 LNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRV 213
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F ++ ++ +W+ LI Y Q G A EA++ F +M G P EVT + V+ A A +
Sbjct: 214 FDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAF 273
Query: 295 IGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEM-------------- 339
G Q+H+ ++K F + + N ++D Y+KC + E+ FD M
Sbjct: 274 KEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSG 333
Query: 340 -----------------DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
+ D+VSWNALIAG+ + EA+ L + + E CP YT+
Sbjct: 334 YAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTF 393
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGF------DSNVVIGSALVDMYAKCGRLNDARKV 436
N+LN S+++ +E G+Q H +VK GF + ++ +G++L+DMY KCG + + +V
Sbjct: 394 GNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRV 453
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
F+++ K+ VSWNTM++GYAQ+G G EALE++ M E+ KP+ T IG L AC H GLV
Sbjct: 454 FENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLV 513
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
EEG YF SM ++HG+ P DH +V L G A + I+S P +P+ VVW LLS
Sbjct: 514 EEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLS 573
Query: 557 GCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
CK H+++ LG+Y AEKI DP + +++L+N+Y+E W + VRK+M+ + + K
Sbjct: 574 ACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQ 633
Query: 617 TGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
GCSW ++Q+ +H F Q +++ ++ L+ H+ GYVPD
Sbjct: 634 PGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPD 680
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 148/490 (30%), Positives = 248/490 (50%), Gaps = 40/490 (8%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
NV ++N ++ +++ ++++ LF MPE++ SW+++I+GF+Q E AL++F M
Sbjct: 89 NVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMH 148
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
N Y++ +SAC+ D + G +IHG + +S L+ + + LI+ Y KCGL+
Sbjct: 149 RDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVG 208
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ VFD E+N +SW L++ Y Q G + L+ F + G E + ASV+ ACA
Sbjct: 209 CARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACA 268
Query: 189 VLGNLKVGMQIHSLVFKC-ALEFDKFVAMGLINLYAKCEKLD------------------ 229
L K G+QIH+ V K D + L+++YAKC +++
Sbjct: 269 TLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSET 328
Query: 230 -------------LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
A +F+ I+ D+ +W+ALI GY Q G+ EA+ LF + + P
Sbjct: 329 TMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCP 388
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF------SSFTFVANTVLDFYSKCELLE 330
+ TF +L A A++ + GRQ HS ++K GF FV N+++D Y KC +E
Sbjct: 389 THYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVE 448
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
E L+ F+ M E D VSWN +I G+ + + EA+EL + ML G P+ T L S
Sbjct: 449 EGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACS 508
Query: 391 DIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSW 448
+E G++ + K G + +VD+ + G L +A+ + + + + + V W
Sbjct: 509 HAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVW 568
Query: 449 NTMLVGYAQH 458
+++L H
Sbjct: 569 SSLLSACKVH 578
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 210/445 (47%), Gaps = 69/445 (15%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ- 239
A +L C L + + +H + + + F+ LI++Y KC LD A +VF +
Sbjct: 28 AKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSE 87
Query: 240 ----------------------------LP--DLTAWSALIGGYAQLGKACEAIDLFVKM 269
+P D +W+++I G+AQ + EA+D FV+M
Sbjct: 88 RNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRM 147
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
+ ++ +F L A + +K+ G Q+H LI K +S F+ + ++DFYSKC L+
Sbjct: 148 HRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLV 207
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
+ + FD M+E +VVSWN LI + + EA+E M G P+ T +++++
Sbjct: 208 GCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSAC 267
Query: 390 SDIPAIEWGKQTHCCIVKPG-FDSNVVIGSALVDMYAKCGRLNDARKVFDHL-------- 440
+ + A + G Q H +VK F +++++G+ALVDMYAKCGR+N+AR VFD +
Sbjct: 268 ATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSE 327
Query: 441 -----------------------SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
K++VSWN ++ GY Q+G EAL ++ M++ +
Sbjct: 328 TTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVC 387
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIR-----DHGISPRMDHIASVVHLFACRGQT 532
P TF +L+A ++ +E G + +++ G P + S++ ++ G
Sbjct: 388 PTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSV 447
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSG 557
++ +E + V W ++ G
Sbjct: 448 EEGLRVFENM-VEKDHVSWNTMIIG 471
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 203/438 (46%), Gaps = 49/438 (11%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S + +V + L+ Y K + A+++FD M E+NV+SW+ LI+ + Q G AL
Sbjct: 185 SKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEA 244
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV-SNCLINMYG 122
F M +P+ T VSACA+ + G +IH R+ +S N + N L++MY
Sbjct: 245 FGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYA 304
Query: 123 KCGLLSSAQFVFDASLERNSIS-------------------------------WVSLLSS 151
KCG ++ A+ VFD RN++S W +L++
Sbjct: 305 KCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAG 364
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF- 210
Y Q GE+ L +F + ++ V + ++ ++L A A L +L++G Q HS V K F
Sbjct: 365 YTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQ 424
Query: 211 -----DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
D FV LI++Y KC ++ RVF N+ D +W+ +I GYAQ G EA++L
Sbjct: 425 SGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALEL 484
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-LHSLIIKMGFSSFTFVANTVLDFYS 324
F KM SG P VT L A + GR+ S+ + G ++D
Sbjct: 485 FQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLG 544
Query: 325 KCELLEESLKTFDEMDEH-DVVSWNALIAGHLASCHYGEAIELLK---DMLFEGHCPNLY 380
+ LEE+ + M + D V W++L L++C I L K + +FE +
Sbjct: 545 RAGCLEEAKDLIESMPKQPDAVVWSSL----LSACKVHRNITLGKYVAEKIFEIDPTSSG 600
Query: 381 TYSNILNISSDIPAIEWG 398
Y + N+ S++ WG
Sbjct: 601 PYVLLANMYSELG--RWG 616
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 141/308 (45%), Gaps = 32/308 (10%)
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
F+ +L ++ + R +H +I+ F F+ N ++D Y KC L+ + K FD M
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 341 EHDVV-------------------------------SWNALIAGHLASCHYGEAIELLKD 369
E +V SWN++IAG + EA++
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M + N Y++ + L+ S + ++ G Q H I K + +V +GS L+D Y+KCG
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ AR+VFD + KN+VSWN ++ Y Q+G EALE + M E KP++ T V+SA
Sbjct: 207 VGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSA 266
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C + +EG +++ + ++V ++A G+ A P+ N V
Sbjct: 267 CATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR-NAV 325
Query: 550 VWRCLLSG 557
++SG
Sbjct: 326 SETTMVSG 333
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/658 (32%), Positives = 370/658 (56%), Gaps = 6/658 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N + NHL+ MY + + + A+++FDEMP RN +SW+++I+ Q G AL F M+
Sbjct: 85 NTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSML 144
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ + AV AC GD +G+++H +S + V N L+ MY K GL+
Sbjct: 145 RSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVD 204
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA-ISEFSCASVLGAC 187
+F+ +++ ISW S+++ + Q G + L++F G +EF S AC
Sbjct: 205 DGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRAC 264
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+G+ + G QIH L K L+ D +V L ++YA+C+ LD A F I+ PDL +W+
Sbjct: 265 GAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWN 324
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+++ Y+ G EA+ LF +M SGL P +T +L A GR +HS ++K+
Sbjct: 325 SIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKL 384
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
G V N++L Y++C L ++ F E+ + DVV+WN+++ H E ++L
Sbjct: 385 GLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLF 444
Query: 368 KDMLFEGHCPNL--YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L P+L + +N+L+ S+++ E KQ H K G + ++ + L+D YA
Sbjct: 445 S--LLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYA 502
Query: 426 KCGRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG L+DA ++F+ + +++++ SW++++VGYAQ G +EA +++S M+ I+PN TFI
Sbjct: 503 KCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFI 562
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVL+AC +G V EG +Y++ M ++GI P +H + +V L A G+ A FI P
Sbjct: 563 GVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPF 622
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP+ ++W+ LL+ K H D+ +G+ AAE IL+ DP ++A+++L N+YA + W+E A++
Sbjct: 623 EPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARL 682
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+K M+ +KK G SW +L+ ++ F + + +++ ++ + + + GYVP
Sbjct: 683 KKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEMIKAGYVP 740
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 213/427 (49%), Gaps = 8/427 (1%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSG-------LELNSHVSNCLINMYGKCGLLSSAQ 131
Y VSAC+ G+ +H + S L N+ + N LI MYG+C SA+
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD RN +SW S+++++ Q G L +F +SG A +F+ S + AC LG
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
++ G Q+H+ K D V L+ +Y+K +D +F I+ DL +W ++I
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 252 GYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
G+AQ G EA+ +F +M G P+E F A V G Q+H L IK
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
+V ++ D Y++C+ L+ + F ++ D+VSWN+++ + EA+ L +M
Sbjct: 287 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
G P+ T +L A+ G+ H +VK G D +V + ++L+ MYA+C L
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 406
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ A VF + +++V+WN++L AQH E L+++S++ +++ + + VLSA
Sbjct: 407 SSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSAS 466
Query: 491 VHIGLVE 497
+G E
Sbjct: 467 AELGYFE 473
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 3/255 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V N LL MY + S ++ A +F E+ +++V++W+++++ +Q PE
Sbjct: 381 LVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEV 440
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F L+ + + +SA A G K++H +++GL + +SN LI+
Sbjct: 441 LKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDT 500
Query: 121 YGKCGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG L A +F+ R+ SW SL+ Y Q G +F R G+ + +
Sbjct: 501 YAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVT 560
Query: 180 CASVLGACAVLGNLKVGMQIHSLV-FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
VL AC+ +G + G +S++ + + + +++L A+ KL A+ +
Sbjct: 561 FIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQM 620
Query: 239 QL-PDLTAWSALIGG 252
PD+ W L+
Sbjct: 621 PFEPDIIMWKTLLAA 635
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/654 (33%), Positives = 360/654 (55%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ +Y K I A K+F MPE+N ++W+ L++G++Q G L F M+ ++ N
Sbjct: 254 LVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCN 313
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
+T + CA+ + + G+ IH + + G E N + L++MY KCGL A VF
Sbjct: 314 EFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFK 373
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+ + + W +L++ Q G+ +K+F L R ++++ S+L A GNL+
Sbjct: 374 TIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQY 433
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G IH+ V+K E D V+ L+ +Y K + ++++ ++ DL +W+A + G
Sbjct: 434 GQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHD 493
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G + +F M G +P+ TF +LG+ + + + GRQ+H+ IIK FV
Sbjct: 494 CGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFV 553
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
++D Y+KC LE++ F+ + D+ +W +I + + +A+ + M EG
Sbjct: 554 CTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGV 613
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
PN +T + L+ S + ++E G+Q H + K G S++ +GSALVDMYAKCG + +A
Sbjct: 614 KPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEA 673
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+F+ L ++ ++WNT++ GYAQ+G G +AL + MM + I P+ TF G+LSAC H GL
Sbjct: 674 LFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGL 733
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
VEEG +FNSM RD GISP +DH A +V + G+ +FI+ + N ++W +L
Sbjct: 734 VEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVL 793
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
K H +LVLG AA K+ PE+ S++I+LSN++A WD+ +VR +M K +KK
Sbjct: 794 GASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKK 853
Query: 616 DTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ GCSW E ++H F + ++ Q ++H +++L L YVP Y H
Sbjct: 854 EPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLH 907
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 176/551 (31%), Positives = 291/551 (52%), Gaps = 2/551 (0%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+P+ + L+ +Y K A+ + +MP+R+V+SW+ALI G G ++ F+
Sbjct: 144 NPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQE 203
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + PN +T + AC+ GK++H + ++ GL L+ V + L+++Y KCG
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ A +F E+N ++W LL+ Y Q G+ LK+F + V +EF+ +VL
Sbjct: 264 IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKG 323
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA NLK G IHSL+ KC E ++F+ GL+++Y+KC A VF I+ PD+ W
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVW 383
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
SALI Q G++ E+I LF M +P++ T +L A + G+ +H+ + K
Sbjct: 384 SALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK 443
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
GF + V+N ++ Y K + + K ++ M + D++SWNA ++G Y + +
Sbjct: 444 YGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTI 503
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
ML EG PN+YT+ +IL S + + +G+Q H I+K D N + +AL+DMYAK
Sbjct: 504 FYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAK 563
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
C L DA F+ LS ++L +W ++ YAQ G +AL + MQ+ +KPN+ T G
Sbjct: 564 CMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGC 623
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LS C + +E G +SM+ G M +++V ++A G A E + + I
Sbjct: 624 LSGCSSLASLEGG-QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEA-EALFEALIRR 681
Query: 547 NKVVWRCLLSG 557
+ + W ++ G
Sbjct: 682 DTIAWNTIICG 692
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 136/432 (31%), Positives = 225/432 (52%), Gaps = 5/432 (1%)
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
VC + Y + CAS+ K IHG + + + +SH+ L+N+Y KC
Sbjct: 104 VCWSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYS 163
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+ A+ V +R+ +SW +L+ G + +F + G+ +EF+ A+ L AC
Sbjct: 164 AYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKAC 223
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
++ L +G Q+H+ FK L D FV L++LYAKC +++LAS++F + + W+
Sbjct: 224 SLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWN 283
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
L+ GYAQ G + LF M + +E T + VL A+ K G+ +HSLIIK
Sbjct: 284 VLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKC 343
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
G+ F+ ++D YSKC L +++ F + + D+V W+ALI E+I+L
Sbjct: 344 GYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF 403
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M PN YT ++L+ +++ +++G+ H C+ K GF+++V + +ALV MY K
Sbjct: 404 HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKN 463
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G ++D K+++ + ++L+SWN L G G+ L I+ M E PN TFI +L
Sbjct: 464 GCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISIL 523
Query: 488 SAC-----VHIG 494
+C VH G
Sbjct: 524 GSCSCLFDVHYG 535
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 242/469 (51%), Gaps = 5/469 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ N L+ MY K DA +F + + +++ WSALI+ Q G E +
Sbjct: 340 IIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEES 399
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F LM PN YT +SA + G+ + G+ IH +++ G E + VSN L+ M
Sbjct: 400 IKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTM 459
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + ++++ ++R+ ISW + LS CG + L IF + G + ++
Sbjct: 460 YMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTF 519
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+LG+C+ L ++ G Q+H+ + K L+ + FV LI++YAKC L+ A F+ + +
Sbjct: 520 ISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSV 579
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL W+ +I YAQ + +A++ F +M G+ P+E T + L + + GG+QL
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS++ K G S FV + ++D Y+KC +EE+ F+ + D ++WN +I G+ +
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
+A+ + ML EG P+ T++ IL+ S +E GK+ + + G V +
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREA 464
+VD+ + G+ ++ + S+N + W T+L H LG +A
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKA 808
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 138/266 (51%), Gaps = 3/266 (1%)
Query: 292 KETIG-GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
K ++G + +H LI+K + + + ++++ Y+KC + +M + DVVSW AL
Sbjct: 125 KRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTAL 184
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
I G +A ++I L ++M EG PN +T + L S A++ GKQ H K G
Sbjct: 185 IQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGL 244
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
++ +GSALVD+YAKCG + A K+F + +N V+WN +L GYAQ G L+++
Sbjct: 245 LLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCS 304
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M E +K N+ T VL C + +++G +S+I G +V +++ G
Sbjct: 305 MMELDVKCNEFTLTTVLKGCANSKNLKQG-QVIHSLIIKCGYEGNEFIGCGLVDMYSKCG 363
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLS 556
A K+ +P+ VVW L++
Sbjct: 364 LAIDAIGVFKTIK-KPDIVVWSALIT 388
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/654 (33%), Positives = 360/654 (55%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ +Y K I A K+F MPE+N ++W+ L++G++Q G L F M+ ++ N
Sbjct: 254 LVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCN 313
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
+T + CA+ + + G+ IH + + G E N + L++MY KCGL A VF
Sbjct: 314 EFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFK 373
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+ + + W +L++ Q G+ +K+F L R ++++ S+L A GNL+
Sbjct: 374 TIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQY 433
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G IH+ V+K E D V+ L+ +Y K + ++++ ++ DL +W+A + G
Sbjct: 434 GQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHD 493
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G + +F M G +P+ TF +LG+ + + + GRQ+H+ IIK FV
Sbjct: 494 CGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFV 553
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
++D Y+KC LE++ F+ + D+ +W +I + + +A+ + M EG
Sbjct: 554 CTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGV 613
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
PN +T + L+ S + ++E G+Q H + K G S++ +GSALVDMYAKCG + +A
Sbjct: 614 KPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEA 673
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+F+ L ++ ++WNT++ GYAQ+G G +AL + MM + I P+ TF G+LSAC H GL
Sbjct: 674 LFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGL 733
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
VEEG +FNSM RD GISP +DH A +V + G+ +FI+ + N ++W +L
Sbjct: 734 VEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVL 793
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
K H +LVLG AA K+ PE+ S++I+LSN++A WD+ +VR +M K +KK
Sbjct: 794 GASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKK 853
Query: 616 DTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ GCSW E ++H F + ++ Q ++H +++L L YVP Y H
Sbjct: 854 EPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLH 907
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 176/551 (31%), Positives = 291/551 (52%), Gaps = 2/551 (0%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+P+ + L+ +Y K A+ + +MP+R+V+SW+ALI G G ++ F+
Sbjct: 144 NPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQE 203
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + PN +T + AC+ GK++H + ++ GL L+ V + L+++Y KCG
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ A +F E+N ++W LL+ Y Q G+ LK+F + V +EF+ +VL
Sbjct: 264 IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKG 323
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA NLK G IHSL+ KC E ++F+ GL+++Y+KC A VF I+ PD+ W
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVW 383
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
SALI Q G++ E+I LF M +P++ T +L A + G+ +H+ + K
Sbjct: 384 SALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK 443
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
GF + V+N ++ Y K + + K ++ M + D++SWNA ++G Y + +
Sbjct: 444 YGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTI 503
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
ML EG PN+YT+ +IL S + + +G+Q H I+K D N + +AL+DMYAK
Sbjct: 504 FYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAK 563
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
C L DA F+ LS ++L +W ++ YAQ G +AL + MQ+ +KPN+ T G
Sbjct: 564 CMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGC 623
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LS C + +E G +SM+ G M +++V ++A G A E + + I
Sbjct: 624 LSGCSSLASLEGG-QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEA-EALFEALIRR 681
Query: 547 NKVVWRCLLSG 557
+ + W ++ G
Sbjct: 682 DTIAWNTIICG 692
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 136/432 (31%), Positives = 225/432 (52%), Gaps = 5/432 (1%)
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
VC + Y + CAS+ K IHG + + + +SH+ L+N+Y KC
Sbjct: 104 VCWSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYS 163
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+ A+ V +R+ +SW +L+ G + +F + G+ +EF+ A+ L AC
Sbjct: 164 AYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKAC 223
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
++ L +G Q+H+ FK L D FV L++LYAKC +++LAS++F + + W+
Sbjct: 224 SLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWN 283
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
L+ GYAQ G + LF M + +E T + VL A+ K G+ +HSLIIK
Sbjct: 284 VLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKC 343
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
G+ F+ ++D YSKC L +++ F + + D+V W+ALI E+I+L
Sbjct: 344 GYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF 403
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M PN YT ++L+ +++ +++G+ H C+ K GF+++V + +ALV MY K
Sbjct: 404 HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKN 463
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G ++D K+++ + ++L+SWN L G G+ L I+ M E PN TFI +L
Sbjct: 464 GCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISIL 523
Query: 488 SAC-----VHIG 494
+C VH G
Sbjct: 524 GSCSCLFDVHYG 535
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 242/469 (51%), Gaps = 5/469 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ N L+ MY K DA +F + + +++ WSALI+ Q G E +
Sbjct: 340 IIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEES 399
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F LM PN YT +SA + G+ + G+ IH +++ G E + VSN L+ M
Sbjct: 400 IKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTM 459
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + ++++ ++R+ ISW + LS CG + L IF + G + ++
Sbjct: 460 YMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTF 519
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+LG+C+ L ++ G Q+H+ + K L+ + FV LI++YAKC L+ A F+ + +
Sbjct: 520 ISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSV 579
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL W+ +I YAQ + +A++ F +M G+ P+E T + L + + GG+QL
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS++ K G S FV + ++D Y+KC +EE+ F+ + D ++WN +I G+ +
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
+A+ + ML EG P+ T++ IL+ S +E GK+ + + G V +
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREA 464
+VD+ + G+ ++ + S+N + W T+L H LG +A
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKA 808
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 138/266 (51%), Gaps = 3/266 (1%)
Query: 292 KETIG-GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
K ++G + +H LI+K + + + ++++ Y+KC + +M + DVVSW AL
Sbjct: 125 KRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTAL 184
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
I G +A ++I L ++M EG PN +T + L S A++ GKQ H K G
Sbjct: 185 IQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGL 244
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
++ +GSALVD+YAKCG + A K+F + +N V+WN +L GYAQ G L+++
Sbjct: 245 LLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCS 304
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M E +K N+ T VL C + +++G +S+I G +V +++ G
Sbjct: 305 MMELDVKCNEFTLTTVLKGCANSKNLKQG-QVIHSLIIKCGYEGNEFIGCGLVDMYSKCG 363
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLS 556
A K+ +P+ VVW L++
Sbjct: 364 LAIDAIGVFKTIK-KPDIVVWSALIT 388
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/670 (33%), Positives = 366/670 (54%), Gaps = 12/670 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF ++ N L+ MY +F +++A+ +F+EM R+ +SW++LISG+ G E AL+ +
Sbjct: 151 GFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMY 210
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ P+ +T + AC S + G +HG + + G+ + + N L++MY K
Sbjct: 211 HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L A+ VF ++S++W +++ Y Q G H +K+F+ G S S +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFM-DMIDGFVPDMLSITSTI 329
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC G+L+VG +H + E D LI++YAKC L A VF + D
Sbjct: 330 RACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSV 389
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W++LI GY Q G E ++ F KM P VTF +L F+ + + GR +H +
Sbjct: 390 TWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDV 448
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG--HLASCHYGE 362
IK GF + + N++LD Y+KC +++ LK F M HD++SWN +IA H C G
Sbjct: 449 IKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVG- 507
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
+++ +M EG P+ T IL + S + GK+ H I K GF+SNV IG+AL++
Sbjct: 508 -FQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIE 566
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MY+KCG L + KVF ++ K++V+W ++ + +G G++AL+ + M+ + + P+
Sbjct: 567 MYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVA 626
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
FI + AC H G+V+EG +F+ M D+ + PRM+H A VV L A G +A EFI S
Sbjct: 627 FIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSM 686
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
P++P+ +W LLS C+ + + + ++KIL + +DT ++++SN+YA WD+
Sbjct: 687 PMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVK 746
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFST--SRFAQFQGI-DLHEVMNQLSVHLFDGG 659
VR MK K LKK+ G SW E+Q +++ F T F Q+ + DL E + +L + G
Sbjct: 747 TVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRL---MAKEG 803
Query: 660 YVPDPIYSSH 669
YV D ++ H
Sbjct: 804 YVADLQFALH 813
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 163/561 (29%), Positives = 293/561 (52%), Gaps = 11/561 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEM-PERNVISWSALISGFSQIGMPEV 59
+ITSG +VI L+ Y + + +F + P NV W+++I + G+
Sbjct: 45 IITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQ 104
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL Y+ M L+P+ +T+ +++CA D G +H G E + ++ N LI+
Sbjct: 105 ALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALID 164
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY + L +A++VF+ R+S+SW SL+S YC G L ++ R +G+ F+
Sbjct: 165 MYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFT 224
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+SVL AC L +K G+ +H ++ K + D + GL+++Y K E+L A RVFS +
Sbjct: 225 MSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMA 284
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ D W+ +I GYAQLG+ ++ LF+ M G +P ++ + + A + G+
Sbjct: 285 VKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKF 343
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +I GF T N ++D Y+KC L + + FD D V+WN+LI G+ S +
Sbjct: 344 VHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGY 403
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
Y E +E K M E P+ T+ +L+I S + I G+ HC ++K GF++ ++IG++
Sbjct: 404 YKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNS 462
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+D+YAKCG ++D KVF ++S+ +++SWNT++ ++ + M+ + P+
Sbjct: 463 LLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPD 522
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR---RAY 536
+ T +G+L C + + +G + I G + +++ +++ G + +
Sbjct: 523 EATVLGILPMCSLLAVRRQG-KEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVF 581
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
+++K E + V W L+S
Sbjct: 582 KYMK----EKDVVTWTALISA 598
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 212/408 (51%), Gaps = 9/408 (2%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSIS-WVSLLSSYCQ 154
+ +H + SGL L+ S LI+ Y + S+ VF + N++ W S++ +
Sbjct: 39 RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
G L + R+ + F+ SV+ +CA + +L++G +H + E D ++
Sbjct: 99 NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
LI++Y++ LD A VF + D +W++LI GY G +A+D++ K +G+
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218
Query: 275 MPSEVTFSYVL---GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
+P T S VL G+ VKE G +H +I K+G + + N +L Y K E L E
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKE---GVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLRE 275
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+ + F +M D V+WN +I G+ + +++L DM+ +G P++ + ++ +
Sbjct: 276 ARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQ 334
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
++ GK H ++ GF+ + V + L+DMYAKCG L A++VFD K+ V+WN++
Sbjct: 335 SGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSL 394
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ GY Q G +E LE + MM+ + KP+ TF+ +LS + + +G
Sbjct: 395 INGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQG 441
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 190/384 (49%), Gaps = 8/384 (2%)
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
EF +S+L + N +HSL+ L + LI+ YA+ + + VF
Sbjct: 19 EFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFR 78
Query: 237 NIQ-LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+I ++ W+++I G +A+ + +M L P TF V+ + A + +
Sbjct: 79 SISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLE 138
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G +H ++MGF S ++ N ++D YS+ L+ + F+EM D VSWN+LI+G+
Sbjct: 139 LGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYC 198
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
++ + +A+++ G P+ +T S++L + A++ G H I K G +V+
Sbjct: 199 SNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI 258
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
IG+ L+ MY K RL +AR+VF ++ K+ V+WNTM+ GYAQ G +++++ M +
Sbjct: 259 IGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGF 318
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS--VVHLFACRGQTR 533
+ P+ + + AC G ++ G +I G D +A ++ ++A G
Sbjct: 319 V-PDMLSITSTIRACGQSGDLQVGKFVHKYLI---GSGFECDTVACNILIDMYAKCGDLL 374
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSG 557
A E ++ + + V W L++G
Sbjct: 375 AAQEVFDTTKCK-DSVTWNSLING 397
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 161/329 (48%), Gaps = 15/329 (4%)
Query: 266 FVKMFSSGLMPS-EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
F F++ PS E S +L + K T R +HSLII G S + ++ Y+
Sbjct: 6 FCSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYA 65
Query: 325 KCELLEESLKTFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+ + S+ F + ++V WN++I + + +A+ +M + P+ +T+
Sbjct: 66 QVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFP 125
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+++N + I +E G H ++ GF+S++ IG+AL+DMY++ L++AR VF+ +S++
Sbjct: 126 SVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNR 185
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
+ VSWN+++ GY +G +AL++Y + + P+ T VL AC + V+EG
Sbjct: 186 DSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVA-V 244
Query: 504 NSMIRDHGISPRM---DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKT 560
+ +I GI+ + + + S+ F + RR + S + V W ++ G
Sbjct: 245 HGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVF----SKMAVKDSVTWNTMICGYAQ 300
Query: 561 HKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
LGR+ A L D D MLS
Sbjct: 301 -----LGRHEASVKLFMDMIDGFVPDMLS 324
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ SGF NV N L+ MY K + + K+F M E++V++W+ALIS F G + A
Sbjct: 549 IFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKA 608
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F+ M + P+ ++ + AC+ G + G RM LE C+++
Sbjct: 609 LKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVD 668
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ + GLL+ A +F+ ++ ++ W +LLS+
Sbjct: 669 LLARSGLLAQAEEFILSMPMKPDASLWGALLSA 701
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/665 (31%), Positives = 369/665 (55%), Gaps = 4/665 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +GF+ + L+ ++ KF+ I +A ++F+ + + + + ++ G+++ A
Sbjct: 67 IIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDA 126
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ ++ M C + P Y + + D R G+EIHG + +G + N ++N+
Sbjct: 127 VRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNL 186
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + A +F+ +R+ +SW ++++ Y Q G +++ L +++G +
Sbjct: 187 YAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITL 246
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A A L L++G IH F+ E+ VA +++ Y KC + A VF +
Sbjct: 247 VSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSS 306
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+ +I GYAQ G++ EA F+KM G+ P+ V+ L A A++ + GR +
Sbjct: 307 RNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYV 366
Query: 301 HSLI--IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
H L+ K+GF V N+++ YSKC+ ++ + F + VV+WNA+I G+ +
Sbjct: 367 HRLLDEKKIGFD--VSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNG 424
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA+ L +M P+ +T +++ +D+ K H ++ D NV + +
Sbjct: 425 CVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCT 484
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+D +AKCG + ARK+FD + +++++WN M+ GY +G GREAL++++ MQ +KP
Sbjct: 485 ALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKP 544
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N+ TF+ V++AC H GLVEEG +YF SM ++G+ P MDH ++V L G+ A++F
Sbjct: 545 NEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKF 604
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I+ P++P V +L C+ HK++ LG A+++ DP+D H++L+N+YA A+MW
Sbjct: 605 IQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMW 664
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
D+ A+VR M++K ++K GCS EL+N++H F + Q ++ + L +
Sbjct: 665 DKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAA 724
Query: 659 GYVPD 663
GYVPD
Sbjct: 725 GYVPD 729
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 184/347 (53%), Gaps = 4/347 (1%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L C L L QI L+ K + LI+L+ K + A+RVF ++
Sbjct: 48 AILLELCTSLKELH---QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEH 104
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ ++ GYA+ +A+ + +M +MP F+Y+L + + GR++
Sbjct: 105 KLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREI 164
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H ++I GF S F V++ Y+KC +E++ K F+ M + D+VSWN ++AG+ +
Sbjct: 165 HGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFA 224
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A++++ M G P+ T ++L +D+ A+ G+ H + GF+ V + +A+
Sbjct: 225 RRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAM 284
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+D Y KCG + AR VF +SS+N+VSWNTM+ GYAQ+G EA + M + ++P +
Sbjct: 285 LDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTN 344
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA 527
+ +G L AC ++G +E G Y + ++ + I + + S++ +++
Sbjct: 345 VSMMGALHACANLGDLERG-RYVHRLLDEKKIGFDVSVMNSLISMYS 390
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/653 (32%), Positives = 354/653 (54%), Gaps = 2/653 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPE-RNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEP 74
L+LMY+K + +A+++FDEMP+ +V W+AL+SG+++ G + FR M CC + P
Sbjct: 135 LVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRP 194
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
+ YT + A G G+ +HG + + G V N L+ Y K A VF
Sbjct: 195 DAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVF 254
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D R+ ISW S++S G + +++F+ G + + SVL ACA L L
Sbjct: 255 DGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLF 314
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
+G +H K +A L+++Y+ C +++F N+ ++ +W+A+I Y
Sbjct: 315 LGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYT 374
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
+ G + LF +M G P + L AFA + G+ +H I+ G
Sbjct: 375 RAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLA 434
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V N +++ Y KC +EE+ FD + D++SWN LI G+ + EA L +ML +
Sbjct: 435 VTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQL 494
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
PN T + IL ++ + ++E G++ H ++ G+ + + +AL+DMY KCG L AR
Sbjct: 495 R-PNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLAR 553
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
++FD LS+KNL+SW M+ GY HG GR+A+ ++ M+ + I P+ +F +L AC H G
Sbjct: 554 RLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSG 613
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
L +EGW +F++M ++H I PR+ H +V L G + AYEFI S PIEP+ +W L
Sbjct: 614 LRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSL 673
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
L GC+ H+++ L AE++ +PE+T +++L+N+YAEA W+ K++ + + L+
Sbjct: 674 LRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLR 733
Query: 615 KDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
++TGCSW E + K+H F QG + E +N+++ + + G+ P Y+
Sbjct: 734 ENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYA 786
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 233/486 (47%), Gaps = 5/486 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N L+ Y K +R DA +FD MP R+VISW+++ISG + G+ + A+ F
Sbjct: 226 GFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELF 285
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M E + T + + ACA G+ +HG ++G + ++N L++MY C
Sbjct: 286 VRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNC 345
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
S +F +++N +SW ++++SY + G + +F G F+ S L
Sbjct: 346 SDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSAL 405
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A A LK G +H + +E V L+ +Y KC ++ A +F + D+
Sbjct: 406 HAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMI 465
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ LIGGY++ A EA LF +M L P+ VT + +L A A + GR++H+
Sbjct: 466 SWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYA 524
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
++ G+ FVAN ++D Y KC L + + FD + +++SW ++AG+ +AI
Sbjct: 525 LRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAI 584
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDM 423
L + M G P+ ++S IL S + G + + K + + + +VD+
Sbjct: 585 ALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDL 644
Query: 424 YAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
G L +A + D + + S W ++L G H + A E+ + E ++P +
Sbjct: 645 LINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFE--LEPENTG 702
Query: 483 FIGVLS 488
+ +L+
Sbjct: 703 YYVLLA 708
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 188/388 (48%), Gaps = 6/388 (1%)
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE---FDKFVAMGLINLYAKCEKLDL 230
+ + S +VL C+ + +L+ G + H LV +L D + L+ +Y KC L+
Sbjct: 88 GVDDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLEN 147
Query: 231 ASRVFSNI-QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A RVF + Q+ D+ W+AL+ GYA+ G E + LF KM G+ P T S VL A
Sbjct: 148 ARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIA 207
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ G +H L+ K+GF S V N ++ FY+K ++++ FD M DV+SWN+
Sbjct: 208 GLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNS 267
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I+G ++ Y +AIEL M EG + T ++L +++ + G+ H VK G
Sbjct: 268 MISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTG 327
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
F S + + L+DMY+ C K+F ++ KN+VSW M+ Y + GL + ++
Sbjct: 328 FISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQ 387
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M +P+ L A L++ G IR+ G+ + +++ ++
Sbjct: 388 EMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRN-GMEKVLAVTNALMEMYVKC 446
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G A + I + + + W L+ G
Sbjct: 447 GNMEEA-KLIFDGVVSKDMISWNTLIGG 473
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 148/290 (51%), Gaps = 9/290 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF N LL MY S K+F M ++NV+SW+A+I+ +++ G+ +
Sbjct: 324 VKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVA 383
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M P+ + A+ A A + GK +HG R+G+E V+N L+ MY
Sbjct: 384 GLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMY 443
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF----LLSRKSGVAISE 177
KCG + A+ +FD + ++ ISW +L+ Y + +F L R + V ++
Sbjct: 444 VKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLRPNAVTMT- 502
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+L A A L +L+ G ++H+ + D FVA LI++Y KC L LA R+F
Sbjct: 503 ----CILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDR 558
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ +L +W+ ++ GY G+ +AI LF +M SG+ P +FS +L A
Sbjct: 559 LSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYA 608
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 10/187 (5%)
Query: 381 TYSNILNISSDIPAIEWGKQTH-----CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
+Y +L + S++ ++E GK+ H + + G D+ V+G LV MY KCG L +AR+
Sbjct: 93 SYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDN--VLGQKLVLMYLKCGDLENARR 150
Query: 436 VFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
VFD + + V W ++ GYA+ G RE + ++ M ++P+ T VL +G
Sbjct: 151 VFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLG 210
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
+E+G + ++ G + +++ +A +T+ A P + + W +
Sbjct: 211 SIEDG-EVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMP-HRDVISWNSM 268
Query: 555 LSGCKTH 561
+SGC ++
Sbjct: 269 ISGCTSN 275
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/661 (32%), Positives = 372/661 (56%), Gaps = 12/661 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N + NHL+ MY + + + A+++FDEMP RN +SW+++I+ Q G AL F M+
Sbjct: 85 NTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSML 144
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ + AV AC GD +G+++H +S + V N L+ MY K GL+
Sbjct: 145 RSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVD 204
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS----EFSCASVL 184
+F+ +++ ISW S+++ + Q G + L++F RK V S EF S
Sbjct: 205 DGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVF---RKMIVEGSHHPNEFHFGSAF 261
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC +G+ + G QIH L K L+ D +V L ++YA+ + LD A F I+ PDL
Sbjct: 262 RACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLV 321
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W++++ Y+ G EA+ LF +M SGL P +T +L A GR +HS +
Sbjct: 322 SWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYL 381
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K+G V N++L Y++C L ++ F E+ + DVV+WN+++ H E +
Sbjct: 382 VKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVL 441
Query: 365 ELLKDMLFEGHCPNL--YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
+L L P+L + +N+L+ S+++ E KQ H K G + ++ + L+D
Sbjct: 442 KLFS--LLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLID 499
Query: 423 MYAKCGRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
YAKCG L+DA ++F+ + +++++ SW++++VGYAQ G +EAL+++S M+ I+PN
Sbjct: 500 TYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHV 559
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TFIGVL+AC +G V EG +Y++ M ++GI P +H + +V L A G+ A FI
Sbjct: 560 TFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQ 619
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P EP+ ++W+ LL+ K H D+ +G+ AAE IL+ DP ++A+++L N+YA + W+E
Sbjct: 620 MPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEF 679
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A+++K M+ +KK G SW +L+ ++ F + + +++ ++ + + + GYV
Sbjct: 680 ARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEMIKAGYV 739
Query: 662 P 662
P
Sbjct: 740 P 740
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 212/427 (49%), Gaps = 8/427 (1%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSG-------LELNSHVSNCLINMYGKCGLLSSAQ 131
Y VSAC+ G+ +H + S L N+ + N LI MYG+C SA+
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD RN +SW S+++++ Q G L +F +SG A +F+ S + AC LG
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
++ G Q+H+ K D V L+ +Y+K +D +F I+ DL +W ++I
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 252 GYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
G+AQ G EA+ +F KM G P+E F A V G Q+H L IK
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
+V ++ D Y++ + L+ + F ++ D+VSWN+++ + EA+ L +M
Sbjct: 287 RDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
G P+ T +L A+ G+ H +VK G D +V + ++L+ MYA+C L
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 406
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ A VF + +++V+WN++L AQH E L+++S++ +++ + + VLSA
Sbjct: 407 SSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSAS 466
Query: 491 VHIGLVE 497
+G E
Sbjct: 467 AELGYFE 473
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 3/255 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V N LL MY + S ++ A +F E+ +++V++W+++++ +Q PE
Sbjct: 381 LVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEV 440
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F L+ + + +SA A G K++H +++GL + +SN LI+
Sbjct: 441 LKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDT 500
Query: 121 YGKCGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG L A +F+ R+ SW SL+ Y Q G L +F R G+ + +
Sbjct: 501 YAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVT 560
Query: 180 CASVLGACAVLGNLKVGMQIHSLV-FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
VL AC+ +G + G +S++ + + + +++L A+ KL A+ +
Sbjct: 561 FIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQM 620
Query: 239 QL-PDLTAWSALIGG 252
PD+ W L+
Sbjct: 621 PFEPDIIMWKTLLAA 635
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/663 (30%), Positives = 367/663 (55%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G + + L+ ++ K+ IN+A ++F+ + ++ + ++ G+++ E A
Sbjct: 72 VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETA 131
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L + M ++P Y + + C D + GKEIHG++ + N ++NM
Sbjct: 132 LAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNM 191
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + A +FD ER+ +SW ++++ + Q G L++ L + G +
Sbjct: 192 YAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITL 251
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL A A +G L VG IH + ++ L ++Y+KC ++ A +F +
Sbjct: 252 VTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQ 311
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W++++ GY Q G+ +AI +F KM G+ P+ VT L A AD+ + G+ +
Sbjct: 312 KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFV 371
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + ++ S V N+++ YSKC+ ++ + F+ ++ VSWNA+I G+ +
Sbjct: 372 HKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRV 431
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ +M G P+ +T +++ +++ K H I++ D N+ + +AL
Sbjct: 432 SEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTAL 491
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMY+KCG ++ ARK+FD +S +++++WN M+ GY HGLGR AL+++ M++ ++PND
Sbjct: 492 VDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPND 551
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
T++ V+SAC H GLV+EG +F SM +D+G+ P MDH ++V L G+ + A++FI+
Sbjct: 552 ITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIE 611
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+ PI P V+ CK HK++ +G AA+K+ +P++ H++L+N+YA + W +
Sbjct: 612 NMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSK 671
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
A+VRK M++K LKK GCS EL+N++H F + Q ++ + +L + GY
Sbjct: 672 VAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGY 731
Query: 661 VPD 663
VPD
Sbjct: 732 VPD 734
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 158/302 (52%)
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
QI LV K L + L++L++K ++ A+RVF I + ++ GYA+
Sbjct: 67 QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNS 126
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
A+ +M + P F+Y+L D + G+++H +I F++ F
Sbjct: 127 SLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMT 186
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
V++ Y+KC ++++ K FD M E D+VSWN +IAG + +A+EL+ M EG P
Sbjct: 187 GVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRP 246
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ T +L ++D+ + GK H ++ GF V I +AL DMY+KCG + AR +F
Sbjct: 247 DSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIF 306
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D + K +VSWN+M+ GY Q+G +A+ ++ M E I P T + L AC +G +E
Sbjct: 307 DGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLE 366
Query: 498 EG 499
G
Sbjct: 367 RG 368
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/667 (32%), Positives = 374/667 (56%), Gaps = 4/667 (0%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
+SG + I L+ MYVK + + + +FD++ E + W+ +IS +S G ++N
Sbjct: 178 SSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESIN 237
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F+ M+ ++PN YT+ + A+ G+++HG + + G + V N LI+ Y
Sbjct: 238 LFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYF 297
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
+ AQ +FD +R+ ISW S++S Y + G G++IF+ GV I + +
Sbjct: 298 VGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVN 357
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLASRVFSNIQL 240
V ACA +G L +G +HS K A D+ V L+++Y+KC L+ A RVF +
Sbjct: 358 VFVACANIGTLLLGKVLHSYSIKAA-TLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDE 416
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W+++I GY + G + AI LF +M S G++P + +L A A G+ +
Sbjct: 417 KTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIV 476
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H I + + +FV+N + D Y+KC ++++ F M + DV+SWN +I G+ +
Sbjct: 477 HDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLP 536
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ L +M E P+ T + IL + + A++ G++ H ++ G+ + + +A+
Sbjct: 537 NEALTLFAEMQRESK-PDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAV 595
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMY KCG L AR +FD + +K+LVSW M+ GY HG G EA+ ++ M+ I+P++
Sbjct: 596 VDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDE 655
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
+FI +L AC H GL++EGW FN M ++ I P ++H A +V L A G +A++FIK
Sbjct: 656 VSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIK 715
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+ PI+P+ +W LL GC+ H D+ L AE+I +PE+T +++L+N+YAEA W+E
Sbjct: 716 AMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEE 775
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
K+RK + ++ LKK+ GCSW E++ K++ F ++ Q + ++ +L + + GY
Sbjct: 776 VQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGY 835
Query: 661 VPDPIYS 667
P Y+
Sbjct: 836 SPKTAYA 842
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 270/546 (49%), Gaps = 25/546 (4%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
Y + CA R R G+ + + SG+ ++ + L+ MY KCG L + VFD
Sbjct: 152 AYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKL 211
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
E W ++S Y G + + +F + G+ + ++ +S+L A + ++ G
Sbjct: 212 SESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGR 271
Query: 198 QIHSLVFKCALEFDKF--VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
Q+H L+ C L F+ + V LI+ Y K+ A ++F + D+ +W+++I GY +
Sbjct: 272 QVHGLI--CKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVK 329
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG-FSSFTF 314
G I++F+KM G+ T V A A++ + G+ LHS IK
Sbjct: 330 NGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVR 389
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
NT+LD YSKC L +++ F+ MDE VVSW ++I G++ AI+L +M G
Sbjct: 390 FNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRG 449
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P++Y ++ILN + ++ GK H I + ++N + +AL DMYAKCG + DA
Sbjct: 450 VVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAH 509
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
VF H+ K+++SWNTM+ GY ++ L EAL +++ MQ KP+ T +L AC +
Sbjct: 510 DVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLA 568
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNK--V 549
+++G +R+ G S +VV ++ G R ++ I PNK V
Sbjct: 569 ALDKGREIHGYALRN-GYSEDKYVTNAVVDMYVKCGLLVLARSLFDMI------PNKDLV 621
Query: 550 VWRCLLSGCKTH--KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA--EANMWDETAKVR 605
W +++G H + + ++ +P++ S +S +YA + + DE K+
Sbjct: 622 SWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVS---FISILYACSHSGLLDEGWKIF 678
Query: 606 KIMKEK 611
IMK++
Sbjct: 679 NIMKKE 684
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 221/437 (50%), Gaps = 10/437 (2%)
Query: 127 LSSAQFVFDASLERNSISWVSLLSS-----YCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
LS + + +LE S V L SS +C+ G+ + +++ S+ S + +
Sbjct: 97 LSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAY--C 154
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L CA +++ G ++ S++ + D + + L+ +Y KC L VF +
Sbjct: 155 SILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSES 214
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ W+ +I Y+ G E+I+LF +M G+ P+ TFS +L FA V GRQ+H
Sbjct: 215 KIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVH 274
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
LI K+GF+S+ V N+++ FY + + K FDE+ + DV+SWN++I+G++ +
Sbjct: 275 GLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDD 334
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSAL 420
IE+ ML G +L T N+ ++I + GK H +K D V + L
Sbjct: 335 RGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTL 394
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMY+KCG LN A +VF+ + K +VSW +M+ GY + GL A++++ M+ + P+
Sbjct: 395 LDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDV 454
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
+L+AC G ++ G + IR++ + ++ ++A G + A++
Sbjct: 455 YAVTSILNACAINGNLKSG-KIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVF- 512
Query: 541 SSPIEPNKVVWRCLLSG 557
S + + + W ++ G
Sbjct: 513 SHMKKKDVISWNTMIGG 529
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 86/165 (52%), Gaps = 6/165 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G+ + N ++ MYVK + A+ LFD +P ++++SW+ +I+G+ G A+
Sbjct: 581 LRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAI 640
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
N F M +EP+ +++ + AC+ G G +I M + +E N C++++
Sbjct: 641 NTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDL 700
Query: 121 YGKCG-LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKI 164
+ G L+ + +F+ ++ ++ W +LL C C H H +K+
Sbjct: 701 LARTGNLVKAHKFIKAMPIKPDATIWGALL---CGCRIH-HDVKL 741
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/644 (34%), Positives = 365/644 (56%), Gaps = 3/644 (0%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
+Q+LFDE P++ + + L+ FS+ + ALN F + + + + C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
D GK++H + + G + V L++MY K + + VFD +N +SW SL
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
L+ Y Q G + LK+F + G+ + F+ A+VLG A G ++ G+Q+H++V K L
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+ FV ++N+Y+K + A VF +++ + +W+++I G+ G EA +LF +
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M G+ ++ F+ V+ A++KE +QLH +IK G + ++ YSKC
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344
Query: 329 LEESLKTFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLKDMLFE-GHCPNLYTYSNIL 386
++++ K F M +VVSW A+I+G++ + A+ L M E G PN +T+S++L
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVL 404
Query: 387 NI-SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
N ++ ++E GKQ H C +K GF + + + SALV MYAK G + A +VF ++L
Sbjct: 405 NACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDL 464
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
VSWN+M+ GYAQHG G+++L+I+ M+ ++ + TFIGV+SAC H GLV EG YF+
Sbjct: 465 VSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDL 524
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
M++D+ I P M+H + +V L++ G +A + I P +WR LL+ C+ H ++
Sbjct: 525 MVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQ 584
Query: 566 LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQ 625
LG AAEK++S P+D++A+++LSN+YA A W E AKVRK+M K +KK+ G SW E++
Sbjct: 585 LGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVK 644
Query: 626 NKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
NK F + Q ++ + +LS+ L D GY PD Y H
Sbjct: 645 NKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLH 688
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 250/465 (53%), Gaps = 11/465 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF +V L+ MY+K + D +++FDEM +NV+SW++L++G+ Q G+ E AL
Sbjct: 119 IKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQAL 178
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M ++PN +T+ + A+ G G ++H + +SGL+ V N ++NMY
Sbjct: 179 KLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMY 238
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K ++S A+ VFD+ RN++SW S+++ + G + ++F R GV +++ A
Sbjct: 239 SKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFA 298
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-L 240
+V+ CA + + Q+H V K +FD + L+ Y+KC ++D A ++F + +
Sbjct: 299 TVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGV 358
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFADVKETI-GGR 298
++ +W+A+I GY Q G+ A++LF +M G+ P+E TFS VL A A ++ G+
Sbjct: 359 QNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGK 418
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q HS IK GFS+ V++ ++ Y+K +E + + F + D+VSWN++I+G+
Sbjct: 419 QFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHG 478
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG- 417
+++++ ++M + + T+ +++ + + G++ +VK D ++V
Sbjct: 479 CGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVK---DYHIVPTM 535
Query: 418 ---SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
S +VD+Y++ G L A + + + W T+L H
Sbjct: 536 EHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 580
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 176/362 (48%), Gaps = 13/362 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + N ++ MY K ++DA+ +FD M RN +SW+++I+GF G+ A
Sbjct: 219 VIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEA 278
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M ++ + + CA+ + K++H ++ ++G + + ++ L+
Sbjct: 279 FELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVA 338
Query: 121 YGKCGLLSSAQFVF-DASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEF 178
Y KC + A +F +N +SW +++S Y Q G + +F + R+ GV +EF
Sbjct: 339 YSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEF 398
Query: 179 SCASVLGACAV-LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ +SVL ACA +++ G Q HS K V+ L+ +YAK ++ A+ VF
Sbjct: 399 TFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKR 458
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
DL +W+++I GYAQ G +++ +F +M S L +TF V+ A G
Sbjct: 459 QVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEG 518
Query: 298 RQLHSLIIKMGFSSFTFVANT-----VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALI 351
++ L++K + V ++D YS+ +LE+++ ++M W L+
Sbjct: 519 QRYFDLMVK----DYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLL 574
Query: 352 AG 353
A
Sbjct: 575 AA 576
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/670 (33%), Positives = 366/670 (54%), Gaps = 12/670 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF ++ N L+ MY +F +++A+ +F+EM R+ +SW++LISG+ G E AL+ +
Sbjct: 151 GFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMY 210
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ P+ +T + AC S + G +HG + + G+ + + N L++MY K
Sbjct: 211 HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L A+ VF ++S++W +++ Y Q G H +K+F+ G S S +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFM-DMIDGFVPDMLSITSTI 329
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC G+L+VG +H + E D LI++YAKC L A VF + D
Sbjct: 330 RACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSV 389
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W++LI GY Q G E ++ F KM P VTF +L F+ + + GR +H +
Sbjct: 390 TWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDV 448
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG--HLASCHYGE 362
IK GF + + N++LD Y+KC +++ LK F M HD++SWN +IA H C G
Sbjct: 449 IKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVG- 507
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
+++ +M EG P+ T IL + S + GK+ H I K GF+SNV IG+AL++
Sbjct: 508 -FQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIE 566
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MY+KCG L + KVF ++ K++V+W ++ + +G G++AL+ + M+ + + P+
Sbjct: 567 MYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVA 626
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
FI + AC H G+V+EG +F+ M D+ + PRM+H A VV L A G +A EFI S
Sbjct: 627 FIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSM 686
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
P++P+ +W LLS C+ + + + ++KIL + +DT ++++SN+YA WD+
Sbjct: 687 PMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVK 746
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFST--SRFAQFQGI-DLHEVMNQLSVHLFDGG 659
VR MK K LKK+ G SW E+Q +++ F T F Q+ + DL E + +L + G
Sbjct: 747 TVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRL---MAKEG 803
Query: 660 YVPDPIYSSH 669
YV D ++ H
Sbjct: 804 YVADLQFALH 813
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/561 (29%), Positives = 293/561 (52%), Gaps = 11/561 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEM-PERNVISWSALISGFSQIGMPEV 59
+ITSG +VI L+ Y + + +F + P NV W+++I + G+
Sbjct: 45 IITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQ 104
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL Y+ M L+P+ +T+ +++CA D G +H G E + ++ N LI+
Sbjct: 105 ALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALID 164
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY + L +A++VF+ R+S+SW SL+S YC G L ++ R +G+ F+
Sbjct: 165 MYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFT 224
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+SVL AC L +K G+ +H ++ K + D + GL+++Y K E+L A RVFS +
Sbjct: 225 MSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMA 284
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ D W+ +I GYAQLG+ ++ LF+ M G +P ++ + + A + G+
Sbjct: 285 VKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKF 343
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +I GF T N ++D Y+KC L + + FD D V+WN+LI G+ S +
Sbjct: 344 VHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGY 403
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
Y E +E K M E P+ T+ +L+I S + I G+ HC ++K GF++ ++IG++
Sbjct: 404 YKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNS 462
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+D+YAKCG ++D KVF ++S+ +++SWNT++ ++ + M+ + P+
Sbjct: 463 LLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPD 522
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR---RAY 536
+ T +G+L C + + +G + I G + +++ +++ G + +
Sbjct: 523 EATVLGILPMCSLLAVRRQG-KEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVF 581
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
+++K E + V W L+S
Sbjct: 582 KYMK----EKDVVTWTALISA 598
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 209/405 (51%), Gaps = 3/405 (0%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSIS-WVSLLSSYCQ 154
+ +H + SGL L+ S LI+ Y + S+ VF + N++ W S++ +
Sbjct: 39 RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
G L + R+ + F+ SV+ +CA + +L++G +H + E D ++
Sbjct: 99 NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
LI++Y++ LD A VF + D +W++LI GY G +A+D++ K +G+
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+P T S VL A + G +H +I K+G + + N +L Y K E L E+ +
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARR 278
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
F +M D V+WN +I G+ + +++L DM+ +G P++ + ++ +
Sbjct: 279 VFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGD 337
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
++ GK H ++ GF+ + V + L+DMYAKCG L A++VFD K+ V+WN+++ G
Sbjct: 338 LQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLING 397
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
Y Q G +E LE + MM+ + KP+ TF+ +LS + + +G
Sbjct: 398 YTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQG 441
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 190/384 (49%), Gaps = 8/384 (2%)
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
EF +S+L + N +HSL+ L + LI+ YA+ + + VF
Sbjct: 19 EFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFR 78
Query: 237 NIQ-LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+I ++ W+++I G +A+ + +M L P TF V+ + A + +
Sbjct: 79 SISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLE 138
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G +H ++MGF S ++ N ++D YS+ L+ + F+EM D VSWN+LI+G+
Sbjct: 139 LGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYC 198
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
++ + +A+++ G P+ +T S++L + A++ G H I K G +V+
Sbjct: 199 SNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI 258
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
IG+ L+ MY K RL +AR+VF ++ K+ V+WNTM+ GYAQ G +++++ M +
Sbjct: 259 IGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGF 318
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS--VVHLFACRGQTR 533
+ P+ + + AC G ++ G +I G D +A ++ ++A G
Sbjct: 319 V-PDMLSITSTIRACGQSGDLQVGKFVHKYLI---GSGFECDTVACNILIDMYAKCGDLL 374
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSG 557
A E ++ + + V W L++G
Sbjct: 375 AAQEVFDTTKCK-DSVTWNSLING 397
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 161/329 (48%), Gaps = 15/329 (4%)
Query: 266 FVKMFSSGLMPS-EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
F F++ PS E S +L + K T R +HSLII G S + ++ Y+
Sbjct: 6 FCSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYA 65
Query: 325 KCELLEESLKTFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+ + S+ F + ++V WN++I + + +A+ +M + P+ +T+
Sbjct: 66 QVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFP 125
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+++N + I +E G H ++ GF+S++ IG+AL+DMY++ L++AR VF+ +S++
Sbjct: 126 SVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNR 185
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
+ VSWN+++ GY +G +AL++Y + + P+ T VL AC + V+EG
Sbjct: 186 DSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVA-V 244
Query: 504 NSMIRDHGISPRM---DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKT 560
+ +I GI+ + + + S+ F + RR + S + V W ++ G
Sbjct: 245 HGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVF----SKMAVKDSVTWNTMICGYAQ 300
Query: 561 HKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
LGR+ A L D D MLS
Sbjct: 301 -----LGRHEASVKLFMDMIDGFVPDMLS 324
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ SGF NV N L+ MY K + + K+F M E++V++W+ALIS F G + A
Sbjct: 549 IFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKA 608
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F+ M + P+ ++ + AC+ G + G RM LE C+++
Sbjct: 609 LKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVD 668
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ + GLL+ A +F+ ++ ++ W +LLS+
Sbjct: 669 LLARSGLLAQAEEFILSMPMKPDASLWGALLSA 701
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/669 (33%), Positives = 372/669 (55%), Gaps = 8/669 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ--IGMPE 58
++T F I N L+ +Y K S + A +FD + ++V+SW+ LI+ FSQ P
Sbjct: 37 LVTGSFSSTQIA-NSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPS 95
Query: 59 V-ALNYFRLMVCC--VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
+ ++ FR +V + PN +T G +A ++ D+R+G++ H ++ + ++
Sbjct: 96 LHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAAS 155
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR--KSGV 173
L+NMY K GL+ A+ +FD ERN++SW +++S Y ++F L R + G
Sbjct: 156 SLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMRHEEKGK 215
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+EF SVL A + G Q+HSL K L VA L+ +Y KC L+ A +
Sbjct: 216 NENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALK 275
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
F + WSA++ G+AQ G + +A+ LF M SG +PSE T V+ A +D
Sbjct: 276 TFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACA 335
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
+ GRQ+H +K+G+ +V + ++D Y+KC + ++ K F+ + + DVV W ++I G
Sbjct: 336 IVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITG 395
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
++ + Y A+ L M G PN T +++L S++ A++ GKQ H I+K F
Sbjct: 396 YVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLE 455
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ IGSAL MYAKCG L+D ++F + +++++SWN M+ G +Q+G G E LE++ M
Sbjct: 456 IPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCL 515
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
KP++ TF+ +LSAC H+GLV+ GW YF M + I+P ++H A +V + + G+
Sbjct: 516 EGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLH 575
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A EFI+S+ ++ +WR LL+ K H+D LG YA EK++ ++SA+++LS++Y
Sbjct: 576 EAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYT 635
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W++ +VR +MK + + K+ GCSW EL++ H F Q ++ + L+
Sbjct: 636 ALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVFVVGDNMHPQIDEIRLGLKLLTK 695
Query: 654 HLFDGGYVP 662
+ D GY P
Sbjct: 696 LMKDEGYQP 704
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/483 (30%), Positives = 241/483 (49%), Gaps = 9/483 (1%)
Query: 82 AVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERN 141
A+ C R G+ +H R+ +G ++ ++N LIN+Y KC S A VFD+ ++
Sbjct: 16 ALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKD 75
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRK-----SGVAISEFSCASVLGACAVLGNLKVG 196
+SW L++++ Q H L + L R+ + + + V A + L + + G
Sbjct: 76 VVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAG 135
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
Q H+L K A D F A L+N+Y K + A +F + + +W+ +I GYA
Sbjct: 136 RQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQ 195
Query: 257 GKACEAIDLFVKMF--SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
A EA +LF M G +E F+ VL A GRQ+HSL +K G
Sbjct: 196 ELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVS 255
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
VAN ++ Y KC LE++LKTF+ + ++W+A++ G +A++L DM G
Sbjct: 256 VANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSG 315
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P+ +T ++N SD AI G+Q H +K G++ + + SALVDMYAKCG + DAR
Sbjct: 316 ELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDAR 375
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
K F+ + ++V W +++ GY Q+G AL +Y MQ + PND T VL AC ++
Sbjct: 376 KGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLA 435
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
+++G +I+ + S + +++ ++A G Y P + + W +
Sbjct: 436 ALDQGKQMHAGIIK-YNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPAR-DVISWNAM 493
Query: 555 LSG 557
+SG
Sbjct: 494 ISG 496
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/661 (34%), Positives = 368/661 (55%), Gaps = 10/661 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL M+V+F + DA +F M +RN+ SW+ L+ G+++ G+ + AL+ + M+ ++
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVK 204
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT+ + C + G+EIH + R G E + V N LI MY KCG +++A+ V
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLV 264
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD R+ ISW +++S Y + G + GL++F + K V + SV+ AC +LG+
Sbjct: 265 FDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDD 324
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G QIH V + D + LI +Y+ ++ A VFS + DL +W+A+I GY
Sbjct: 325 RLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGY 384
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+A++ + M + G+MP E+T + VL A + + G LH + + G S++
Sbjct: 385 ENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYS 444
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
VAN+++D Y+KC+ ++++L+ F E ++VSW ++I G + EA+ ++M+
Sbjct: 445 IVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR 504
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN T +L+ + I A+ GK+ H ++ G + + +A++DMY +CGR+ A
Sbjct: 505 LK-PNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYA 563
Query: 434 RKVF---DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
K F DH + SWN +L GYA+ G G A E++ M E+ + PN+ TFI +L AC
Sbjct: 564 WKQFFSVDH----EVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCAC 619
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
G+V EG YFNSM + I P + H A VV L G+ AYEFI+ P++P+ V
Sbjct: 620 SRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAV 679
Query: 551 WRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
W LL+ C+ H + LG AAE I D +I+LSN+YA+ WD+ A+VRK+M++
Sbjct: 680 WGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQ 739
Query: 611 KSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSHF 670
L D GCSW E++ +H F +S Q +++ ++ + + + G V P SSH
Sbjct: 740 NGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAG-VEGP-ESSHM 797
Query: 671 E 671
+
Sbjct: 798 D 798
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 147/487 (30%), Positives = 246/487 (50%), Gaps = 9/487 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +V N L+ MYVK +N A+ +FD+MP R+ ISW+A+ISG+ + G+
Sbjct: 233 VIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEG 292
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F +M+ ++P+ T ++AC GD R G++IHG + R+ + + N LI M
Sbjct: 293 LRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPM 352
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y GL+ A+ VF + R+ +SW +++S Y C L+ + + G+ E +
Sbjct: 353 YSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITI 412
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A VL AC+ L NL +GM +H + + L VA LI++YAKC+ +D A +F +
Sbjct: 413 AIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLE 472
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+++I G + EA+ F +M L P+ VT VL A A + G+++
Sbjct: 473 KNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEI 531
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++ G S F+ N +LD Y +C +E + K F +D H+V SWN L+ G+
Sbjct: 532 HAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVD-HEVTSWNILLTGYAERGKG 590
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFDSNVVIGSA 419
A EL + M+ PN T+ +IL S + G + + K N+ +
Sbjct: 591 AHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYAC 650
Query: 420 LVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+VD+ + G+L +A + + K + W +L H +E+ + EN I
Sbjct: 651 VVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIH----HHVELGELAAEN-IFQ 705
Query: 479 NDNTFIG 485
+D T +G
Sbjct: 706 DDTTSVG 712
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 183/366 (50%), Gaps = 2/366 (0%)
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
K G +++S V + L++++ + L A VF ++ +L +W+ L+GGY
Sbjct: 123 KEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGY 182
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
A+ G EA+DL+ +M G+ P TF VL + + GR++H +I+ GF S
Sbjct: 183 AKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDV 242
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V N ++ Y KC + + FD+M D +SWNA+I+G+ + E + L M+
Sbjct: 243 DVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKY 302
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
P+L T ++++ + G+Q H +++ F + I ++L+ MY+ G + +A
Sbjct: 303 PVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEA 362
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
VF ++LVSW M+ GY + ++ALE Y MM+ I P++ T VLSAC +
Sbjct: 363 ETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCL 422
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
++ G + + + + G+ S++ ++A +A E S+ +E N V W
Sbjct: 423 CNLDMGMN-LHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHST-LEKNIVSWTS 480
Query: 554 LLSGCK 559
++ G +
Sbjct: 481 IILGLR 486
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/650 (34%), Positives = 364/650 (56%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL +Y K + A++LFD MPERN++S+ L+ G++ G E A FR + E
Sbjct: 88 NVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHE 147
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N++ + + IH + G + N+ V + LI+ Y CG +S A+ V
Sbjct: 148 VNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCV 207
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD + +++++W +++S Y + L F R +G + F SVL A L +
Sbjct: 208 FDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSA 267
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G IH K + + V L+++YAKC ++ A VF I D+ WS LI Y
Sbjct: 268 VLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRY 327
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
AQ + +A ++F++M S ++P+E + S VL A A+V G+Q+H+L+IK+G+ S
Sbjct: 328 AQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESEL 387
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
FV N ++D Y+KC +E SL+ F + + + VSWN +I G+ S +A+ + ++M
Sbjct: 388 FVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAA 447
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
T+S++L ++ +I+ Q H I K F+++ ++ ++L+D YAKCG + DA
Sbjct: 448 HVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDA 507
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
KVF+ + ++VSWN ++ GYA HG +ALE+++ M ++ KPND TF+ +LS C
Sbjct: 508 LKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGST 567
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLV +G FNSM DH I P MDH +V L G+ A +FI P P+ +VWR
Sbjct: 568 GLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRA 627
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LLS C HK++ LG+++AEK+L +P+D + +++LSN+YA A + D+ A +RK M+ +
Sbjct: 628 LLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGV 687
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
KK+ G SW E++ ++H FS ++ ++ L++ GYVPD
Sbjct: 688 KKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPD 737
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 153/490 (31%), Positives = 255/490 (52%), Gaps = 12/490 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N + L+ Y ++ A+ +FD + ++ ++W+A++S +S+ +PE ALN F
Sbjct: 180 GHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTF 239
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M +PN + + A A GK IHG ++ + HV L++MY KC
Sbjct: 240 SKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKC 299
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A+ VF+ + I W L+S Y Q ++ ++FL +S V +EFS + VL
Sbjct: 300 GYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVL 359
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA + L +G QIH+LV K E + FV L+++YAKC ++ + +F +++ +
Sbjct: 360 QACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEV 419
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ +I GY Q G A +A+ +F +M ++ ++ ++VTFS VL A A+ Q+HSLI
Sbjct: 420 SWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLI 479
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
K F++ T V N+++D Y+KC + ++LK F+ + + DVVSWNA+I+G+ +A+
Sbjct: 480 EKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDAL 539
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVVIGSA 419
EL M PN T+ +L++ + G T +KP D I
Sbjct: 540 ELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCI--- 596
Query: 420 LVDMYAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
V + + GRLNDA K + D S+ + + W +L H AL +S + +I+P
Sbjct: 597 -VRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVH--KNVALGKFSAEKVLEIEP 653
Query: 479 NDNTFIGVLS 488
D T +LS
Sbjct: 654 QDETTYVLLS 663
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 143/526 (27%), Positives = 261/526 (49%), Gaps = 13/526 (2%)
Query: 47 LISGFSQIGMP-------EVALNYFRLMVCCVLEPNYYTYVGA--VSACASRGDARSGKE 97
L+ FSQ +P AL + + + P +Y A + C +RGDAR+G+
Sbjct: 9 LLPTFSQPNVPLRRNLAANAALQWLDDELASLALPKLDSYACARLLQRCIARGDARAGRA 68
Query: 98 IHGRMYRSG--LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
+H R+ + G +L++ +N L+N+Y K G L++A+ +FD ERN +S+V+L+ Y
Sbjct: 69 VHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALR 128
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G +F ++ G ++ F ++L + + IH+ K + + FV
Sbjct: 129 GGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVG 188
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
LI+ Y+ C + A VF I D W+A++ Y++ +A++ F KM +G
Sbjct: 189 SSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAK 248
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P+ + VL A + + G+ +H +K + V +LD Y+KC +E++
Sbjct: 249 PNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTV 308
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F+ + DV+ W+ LI+ + S +A E+ M+ PN ++ S +L +++ +
Sbjct: 309 FEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFL 368
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
+ G+Q H ++K G++S + +G+AL+D+YAKC + ++ ++F L N VSWNT++VGY
Sbjct: 369 DLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGY 428
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
Q G +AL ++ M+ + TF VL AC + ++ +S+I +
Sbjct: 429 CQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQ-IHSLIEKSTFNND 487
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
S++ +A G R A + +S I+ + V W ++SG H
Sbjct: 488 TIVCNSLIDTYAKCGCIRDALKVFESI-IQCDVVSWNAIISGYALH 532
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 120/254 (47%), Gaps = 6/254 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ + N L+ +Y K + ++ ++F + + N +SW+ +I G+ Q G E A
Sbjct: 378 VIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDA 437
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F+ M + T+ + ACA+ + +IH + +S ++ V N LI+
Sbjct: 438 LSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDT 497
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A VF++ ++ + +SW +++S Y G L++F KS ++ +
Sbjct: 498 YAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTF 557
Query: 181 ASVLGACAVLGNLKVGMQIH---SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
++L C G + G+ + ++ + D + ++ L + +L+ A + +
Sbjct: 558 VALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTC--IVRLLGRAGRLNDALKFIGD 615
Query: 238 I-QLPDLTAWSALI 250
I P W AL+
Sbjct: 616 IPSTPSPMVWRALL 629
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/666 (34%), Positives = 371/666 (55%), Gaps = 5/666 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQIGMPEVA 60
+++G ++ N L+ MY F +++A+++FDE +RN +SW+ ++S F + A
Sbjct: 127 VSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDA 186
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F MV + PN + + V+AC D +G+++H + R+G + + +N L++M
Sbjct: 187 VELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDM 246
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A VF + + +SW + +S G H L++ L + SG+ + F+
Sbjct: 247 YSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTL 306
Query: 181 ASVLGACAVLGNLKVGM--QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+S+L ACA G + QIH + K + D ++ + L+++YAK LD A +VF I
Sbjct: 307 SSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWI 366
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
DL W+ALI G + G E++ LF +M G + T + VL + A ++
Sbjct: 367 PRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTT 426
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+L K+GF S + V N ++D Y KC L + K F+E +++++ ++I L+ C
Sbjct: 427 QVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITA-LSQC 485
Query: 359 HYGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+GE AI+L +ML +G P+ + S++LN + + A E GKQ H ++K F ++V G
Sbjct: 486 DHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAG 545
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ALV YAKCG + DA F L K +VSW+ M+ G AQHG G+ AL+++ M + +I
Sbjct: 546 NALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIA 605
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
PN T VL AC H GLV+E YF+SM GI +H + ++ L G+ A E
Sbjct: 606 PNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAME 665
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
+ S P E N VW LL+ + H+D LG+ AAEK+ +PE + H++L+N YA A M
Sbjct: 666 LVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGM 725
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
WDE AKVRK+MK+ +KK+ SW EL++++H F + + D++ + +L +
Sbjct: 726 WDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSK 785
Query: 658 GGYVPD 663
GYVP+
Sbjct: 786 AGYVPN 791
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 179/607 (29%), Positives = 303/607 (49%), Gaps = 21/607 (3%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
NHLL Y K A+++FDE P+ +SWS+L++ +S +P AL FR M +
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVR 100
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N + + V CA DA G ++H +GL + V+N L+ MYG G + A+ V
Sbjct: 101 CNEFA-LPIVLKCAP--DAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRV 157
Query: 134 FD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
FD A+ +RN++SW ++S++ + +++F SGV +EF + V+ AC +
Sbjct: 158 FDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRD 217
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L+ G ++H++V + + D F A L+++Y+K + +A+ VF + D+ +W+A I G
Sbjct: 218 LEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISG 277
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG--AFADVKETIGGRQLHSLIIKMGFS 310
G A++L ++M SSGL+P+ T S +L A A GRQ+H +IK
Sbjct: 278 CVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACAD 337
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG-HLASCHYGEAIELLKD 369
S ++ ++D Y+K LL+++ K F+ + D++ WNALI+G CH GE++ L
Sbjct: 338 SDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCH-GESLSLFCR 396
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M EG N T + +L ++ + AI Q H K GF S+ + + L+D Y KC
Sbjct: 397 MRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNC 456
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L A KVF+ SS N++++ +M+ +Q G +A++++ M ++P+ +L+A
Sbjct: 457 LRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNA 516
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIA--SVVHLFACRGQTRRAYEFIKSSPIEPN 547
C + E+G +I+ ++ D A ++V+ +A G A P +
Sbjct: 517 CASLSAYEQGKQVHAHLIKRKFMT---DVFAGNALVYTYAKCGSIEDADLAFSGLP-DKG 572
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILS-TDPEDTSAHIMLSNVYAEAN---MWDETAK 603
V W ++ G H G+ A + D HI L++V N + DE
Sbjct: 573 VVSWSAMIGGLAQHGH---GKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKG 629
Query: 604 VRKIMKE 610
MKE
Sbjct: 630 YFSSMKE 636
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 238/482 (49%), Gaps = 7/482 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ +V T N L+ MY K I+ A +F ++P+ +V+SW+A ISG G + A
Sbjct: 228 VVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHA 287
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVS--ACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
L M L PN +T + A A G G++IHG M ++ + + ++ L+
Sbjct: 288 LELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALV 347
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+MY K GLL A+ VF+ ++ + W +L+S G H L +F RK G I+
Sbjct: 348 DMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRT 407
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ A+VL + A L + Q+H+L K D V GLI+ Y KC L A++VF
Sbjct: 408 TLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEH 467
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
++ A++++I +Q +AI LF++M GL P S +L A A + G+
Sbjct: 468 SSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 527
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+ +IK F + F N ++ Y+KC +E++ F + + VVSW+A+I G
Sbjct: 528 QVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHG 587
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIG 417
H A+++ + M+ E PN T +++L + ++ K + + G D
Sbjct: 588 HGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHY 647
Query: 418 SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQE 473
S ++D+ + G+L+DA ++ + + N W +L H LG+ A E +++
Sbjct: 648 SCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEP 707
Query: 474 NK 475
K
Sbjct: 708 EK 709
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/634 (33%), Positives = 354/634 (55%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A++LF MPE+N +SW+AL++G++Q+G + L F M C + + +T + CA+
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
G R GK +H RSG E++ + L++MY KCG + A VF + ++W ++
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
++ Q G ++F L R+ G ++F+ +S++ +G+L+ G IH + K
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
E D V+ LI +Y K ++ ++VF + PDL +W+AL+ G+ +F +
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M G P+ TF VL + + + + G+Q+H+ IIK FV ++D Y+K
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
LE++ FD + D+ SW +I+G+ + +A++ + M EG PN YT ++ L+
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
S + +E G+Q H VK G ++ +GSALVD+Y KCG + A +F L S+++VSW
Sbjct: 364 CSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSW 423
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
NT++ GY+QHG G +ALE + MM I P++ TFIGVLSAC +GLVEEG F+SM +
Sbjct: 424 NTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSK 483
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
+GI+P ++H A +V + G+ FI+ + P ++W +L CK H ++ G
Sbjct: 484 IYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGE 543
Query: 569 YAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKM 628
AA+K+ +P S++I+LSN++A WD+ +R +M + +KK+ GCSW E+ ++
Sbjct: 544 KAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQV 603
Query: 629 HYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
H F + + + +++ +++L L GYVP
Sbjct: 604 HVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVP 637
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 232/447 (51%), Gaps = 4/447 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY K + DA K+F ++ +V++WSA+I+G Q G + A F LM PN
Sbjct: 92 LVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPN 151
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
+T VS + GD R G+ IHG + + G E ++ VSN LI MY K + VF+
Sbjct: 152 QFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFE 211
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
A + +SW +LLS + G +IF G + F+ SVL +C+ L + +
Sbjct: 212 AMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEF 271
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G Q+H+ + K + + D FV L+++YAK L+ A F + D+ +W+ +I GYAQ
Sbjct: 272 GKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQ 331
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
+A +A+ F +M G+ P+E T + L + + GRQLH++ +K G FV
Sbjct: 332 TDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFV 391
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
+ ++D Y KC +E + F + D+VSWN +I+G+ +A+E + ML EG
Sbjct: 392 GSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGI 451
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDAR 434
P+ T+ +L+ S + +E GK+ + K G + ++ + +VD+ + G+ N+ +
Sbjct: 452 MPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVK 511
Query: 435 KVFD--HLSSKNLVSWNTMLVGYAQHG 459
+ +L+ +L+ W T+L HG
Sbjct: 512 IFIEEMNLTPYSLI-WETVLGACKLHG 537
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 151/283 (53%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + + N L++MY+K + D K+F+ M +++SW+AL+SGF F
Sbjct: 182 GFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIF 241
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ +PN +T++ + +C+S D GK++H + ++ + + V L++MY K
Sbjct: 242 YQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKA 301
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L A FD + R+ SW ++S Y Q + +K F ++ G+ +E++ AS L
Sbjct: 302 RCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCL 361
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C+ + L+ G Q+H++ K D FV L++LY KC ++ A +F + D+
Sbjct: 362 SGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIV 421
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+W+ +I GY+Q G+ +A++ F M S G+MP E TF VL A
Sbjct: 422 SWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSA 464
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 149/264 (56%), Gaps = 2/264 (0%)
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
++LA R+F + + +W+AL+ GYAQLG + + LF KM S+ T S VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
A+ G+ LH+L ++ G F+ +++D YSKC + ++LK F ++ DVV+W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
+A+I G H EA EL M +G PN +T S++++ ++++ + +G+ H CI K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG-YAQHGLGREALE 466
GF+S+ ++ + L+ MY K + D KVF+ +++ +LVSWN +L G Y GR
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240
Query: 467 IYSMMQENKIKPNDNTFIGVLSAC 490
Y M+ E KPN TFI VL +C
Sbjct: 241 FYQMLLEG-FKPNMFTFISVLRSC 263
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G ++ + L+ +Y K + A+ +F + R+++SW+ +ISG+SQ G E AL
Sbjct: 381 VKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKAL 440
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLINM 120
FR+M+ + P+ T++G +SAC+ G GK+ M + G+ + C++++
Sbjct: 441 EAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDI 500
Query: 121 YGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
G+ G + + F+ + +L S+ W ++L +
Sbjct: 501 LGRAGKFNEVKIFIEEMNLTPYSLIWETVLGA 532
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/650 (34%), Positives = 358/650 (55%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL MY K + A++LFD MPERN++S+ L+ +Q G E A FR + E
Sbjct: 100 NVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N + + + A +H ++ G + N+ V + LI+ Y C L+S A+ V
Sbjct: 160 VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHV 219
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ + ++++ W +++S Y + + ++F R SG + F+ SVL A L ++
Sbjct: 220 FNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSV 279
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G IH K + + V L+++YAKC + A F I D+ S +I Y
Sbjct: 280 VLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRY 339
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
AQ + +A +LF+++ S ++P+E + S VL A ++ + G+Q+H+ IK+G S
Sbjct: 340 AQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDL 399
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
FV N ++DFY+KC ++ SLK F + + + VSWN ++ G S EA+ + +M
Sbjct: 400 FVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAA 459
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
TYS++L + +I Q HC I K F+++ VIG++L+D YAKCG + DA
Sbjct: 460 QMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDA 519
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
KVF HL ++++SWN ++ GYA HG +ALE++ M ++ ++ ND TF+ +LS C
Sbjct: 520 LKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSST 579
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLV G F+SM DHGI P M+H +V L G+ A +FI P P+ +VWR
Sbjct: 580 GLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRA 639
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LLS C HK++ LGR++AEKIL +P+D + +++LSN+YA A D+ A +RK M+ +
Sbjct: 640 LLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGV 699
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+K G SW E++ ++H FS ++ ++ L++ GY+PD
Sbjct: 700 RKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPD 749
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 141/483 (29%), Positives = 248/483 (51%), Gaps = 8/483 (1%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGL--ELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
+ C +RGDAR G+ +HG + R G L+ +N L+NMYGK G L+SA+ +FD ER
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
N +S+V+L+ ++ Q G+ +F R G +++F ++L + + +H
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
S +K + + FV GLI+ Y+ C + A VF+ I D W+A++ Y++
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
A +F KM SG P+ + VL A + + G+ +H IK + V +L
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
D Y+KC ++++ F+ + DV+ + +I+ + S +A EL ++ PN Y
Sbjct: 306 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 365
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
+ S++L +++ +++GKQ H +K G +S++ +G+AL+D YAKC ++ + K+F L
Sbjct: 366 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
N VSWNT++VG++Q GLG EAL ++ MQ ++ T+ VL AC +
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485
Query: 501 HYFNSMIRDHGISPRMDHIA--SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
S+ + + D + S++ +A G R A + + +E + + W ++SG
Sbjct: 486 QIHCSIEKS---TFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGY 541
Query: 559 KTH 561
H
Sbjct: 542 ALH 544
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 245/489 (50%), Gaps = 10/489 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N + L+ Y S ++DA+ +F+ + ++ + W+A++S +S+ PE A F
Sbjct: 192 GHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVF 251
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M +PN + + A GK IHG ++ + HV L++MY KC
Sbjct: 252 SKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKC 311
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A+ F+ + I ++S Y Q ++ ++FL +S V +E+S +SVL
Sbjct: 312 GDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVL 371
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC + L G QIH+ K E D FV L++ YAKC +D + ++FS+++ +
Sbjct: 372 QACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEV 431
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ ++ G++Q G EA+ +F +M ++ + ++VT+S VL A A Q+H I
Sbjct: 432 SWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSI 491
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
K F++ T + N+++D Y+KC + ++LK F + E D++SWNA+I+G+ +A+
Sbjct: 492 EKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADAL 551
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFDSNVVIGSALVDM 423
EL M N T+ +L++ S + G + + G ++ + +V +
Sbjct: 552 ELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRL 611
Query: 424 YAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQH---GLGREALEIYSMMQENKIKPN 479
+ GRLNDA + + D S+ + + W +L H LGR +S + +I+P
Sbjct: 612 LGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR-----FSAEKILEIEPQ 666
Query: 480 DNTFIGVLS 488
D T +LS
Sbjct: 667 DETTYVLLS 675
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 163/339 (48%), Gaps = 6/339 (1%)
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFK--CALEFDKFVAMGLINLYAKCEKLDLA 231
+ F+CA L C G+ + G +H V + D F A L+N+Y K L A
Sbjct: 56 GVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASA 115
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG-AFA- 289
R+F + ++ ++ L+ +AQ G A LF ++ G ++ + +L A A
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
D GG +HS K+G FV + ++D YS C L+ ++ F+ + D V W A
Sbjct: 176 DAAGLAGG--VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTA 233
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+++ + + A + M G PN + +++L + +P++ GK H C +K
Sbjct: 234 MVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTL 293
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
D+ +G AL+DMYAKCG + DAR F+ + +++ + M+ YAQ +A E++
Sbjct: 294 NDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFL 353
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+ + + PN+ + VL AC ++ ++ G N I+
Sbjct: 354 RLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 392
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 12/256 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G ++ N L+ Y K + ++ + K+F + + N +SW+ ++ GFSQ G+ E AL
Sbjct: 391 IKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEAL 450
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F M + TY + ACAS R +IH + +S ++ + N LI+ Y
Sbjct: 451 SVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTY 510
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A VF +ER+ ISW +++S Y G+ L++F KS V ++ +
Sbjct: 511 AKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFV 570
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL------INLYAKCEKLDLASRVF 235
++L C+ G+ H L ++ D + + + L + +L+ A +
Sbjct: 571 ALLSVCS-----STGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFI 625
Query: 236 SNI-QLPDLTAWSALI 250
+I P W AL+
Sbjct: 626 GDIPSAPSAMVWRALL 641
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/662 (32%), Positives = 383/662 (57%), Gaps = 13/662 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEM-PERNVISWSALISGFSQIGMPEVALNYFRLM 67
+ + N LL MY K + A+++FD+M R+++SW+A+ S ++ G +L M
Sbjct: 75 DAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEM 134
Query: 68 VCCVLEPNYYTYVGAVSACASRGDAR-SGKEIHGRMYRSGL-ELNSHVSNCLINMYGKCG 125
+ L PN +T A AC + R +G + G + ++G + V LI+M+ + G
Sbjct: 135 LELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNG 194
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L +AQ VFD +ER S+ W L++ Y Q G +++FL G +S +S++
Sbjct: 195 DLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMIS 254
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE---KLDLASRVFSNIQLPD 242
AC LG++++G Q+HS+ + L D V+ GL+++YAK + ++ A +VF + +
Sbjct: 255 ACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHN 314
Query: 243 LTAWSALIGGYAQLG-KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ +W+ALI GY Q G + + LF +M + + P+ +T+S +L A A++ + GRQ+H
Sbjct: 315 VMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIH 374
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ ++K + V N ++ Y++ +EE+ K FD++ E +++S + + +
Sbjct: 375 AHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCS 434
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
IE + D + + +T++++L+ ++ + + G++ H +K GF S+ I ++LV
Sbjct: 435 SKIEGMDDGV------STFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLV 488
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
MYA+CG L DA + FD + N++SW +++ G A+HG ++AL ++ M +KPND
Sbjct: 489 SMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDV 548
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
T+I VLSAC H+GLV+EG +F SM +DHG+ PRM+H A +V L A G A +FI
Sbjct: 549 TYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINE 608
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P + + +VW+ LLS C+T+ + +G AA +++ +P D + +++LSN+YA+A +WDE
Sbjct: 609 MPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEV 668
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A++R +M++K+L K+TG SW ++ N +H F + ID++ + L + D GYV
Sbjct: 669 ARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYV 728
Query: 662 PD 663
PD
Sbjct: 729 PD 730
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 246/500 (49%), Gaps = 42/500 (8%)
Query: 83 VSACASRGDARSGKEIHGRMYRSG-LELNSHVSNCLINMYGKCGLLSSAQFVFDASLE-R 140
+++ A GD R G+ +H R+ RS L+ ++ V+N L+ MY KCG + +A+ VFD R
Sbjct: 47 LTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVR 106
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV-GMQI 199
+ +SW ++ S + G L++ + G+ + F+ + AC ++ G +
Sbjct: 107 DLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVV 166
Query: 200 HSLVFKCAL-EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
V K D V LI+++A+ L A RVF + W+ LI Y Q G
Sbjct: 167 LGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGC 226
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
A + ++LF+ M G P + S ++ A ++ G+QLHS+ +++G S + V+
Sbjct: 227 ASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCG 286
Query: 319 VLDFYSKCEL---LEESLKTFDEMDEHDVVSWNALIAGHLAS-CHYGEAIELLKDMLFEG 374
++D Y+K ++ +E + K F M H+V+SW ALI+G++ S + L ++ML E
Sbjct: 287 LVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNES 346
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
PN TYSN+L +++ + G+Q H ++K V+G+ALV MYA+ G + +AR
Sbjct: 347 IRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEAR 406
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN-----TFIGVLSA 489
K FD L N++S + + E + +KI+ D+ TF +LSA
Sbjct: 407 KAFDQLYETNILSMSPDV-----------ETERNNASCSSKIEGMDDGVSTFTFASLLSA 455
Query: 490 CVHIGLVEEGWHYFNSMIR-----DHGISPRMDHIASVVHLFACRGQTR---RAYEFIKS 541
+GL+ +G ++ D GIS S+V ++A G RA++ +K
Sbjct: 456 AASVGLLTKGQKLHALSMKAGFRSDQGISN------SLVSMYARCGYLEDACRAFDEMK- 508
Query: 542 SPIEPNKVVWRCLLSGCKTH 561
+ N + W ++SG H
Sbjct: 509 ---DHNVISWTSIISGLAKH 525
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + N L+ MY + + DA + FDEM + NVISW+++ISG ++ G + AL
Sbjct: 473 MKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQAL 532
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
+ F M+ ++PN TY+ +SAC+ G + GKE M + GL C++++
Sbjct: 533 SMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDL 592
Query: 121 YGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ GL+ A QF+ + + +++ W +LLS+
Sbjct: 593 LARSGLVEEARQFINEMPCKADALVWKTLLSA 624
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/667 (33%), Positives = 380/667 (56%), Gaps = 15/667 (2%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPEVALNY 63
+ + N LL +Y K S + A+ +FD MP R+++SW+A+ S S+ G AL
Sbjct: 80 LETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRL 139
Query: 64 FRLMVCCVLEPNYYTYVGAVSAC-ASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLINMY 121
F + L PN +T A AC AS +G + G +++ G + V LI+M+
Sbjct: 140 FGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMF 199
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G L + + VFD ER + W L++ Y Q G +++FL ++G +++ +
Sbjct: 200 AKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLS 259
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC---EKLDLASRVFSNI 238
S+L AC LG+ ++G Q+HSL + LE D V+ GL+++YAK + L A VF+ +
Sbjct: 260 SMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRM 319
Query: 239 QLPDLTAWSALIGGYAQLG-KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
++ AW+AL+ GY Q G + + + LF KM + G+ P+ +T+S +L A A++ + G
Sbjct: 320 PKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSG 379
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
RQ+H+ +K + V N ++ Y++ +EE+ FD++ E ++VS++ + G S
Sbjct: 380 RQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRS 439
Query: 358 CHYGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
Y + IE ++ + + +T+ ++++ ++ + + G++ H +K GF S+ I
Sbjct: 440 NTYQDYQIERMELGI------STFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAI 493
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
G++LV MY++CG L DA +VFD ++ N++SW +M+ G A+HG ALE++ M +
Sbjct: 494 GNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGV 553
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KPND T+I VLSAC H GLV+EG +F M + HG+ PRM+H A +V L G A
Sbjct: 554 KPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDAL 613
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+FI P + + +VW+ LL CKTH ++ +G AA ++ +P+D + +++LSN+YAEA
Sbjct: 614 DFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAG 673
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
+WD+ A++R +M++K+L K+ G SW + N +H F + Q +++ + L +
Sbjct: 674 LWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIK 733
Query: 657 DGGYVPD 663
GYVPD
Sbjct: 734 VMGYVPD 740
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 147/519 (28%), Positives = 252/519 (48%), Gaps = 51/519 (9%)
Query: 91 DARSGKEIHGRMYRSG--LELNSHVSNCLINMYGKCGLLSSAQFVFDASLE--RNSISWV 146
D G+ + G + R+G LE ++ V+N L+ +Y KC +++A+ VFD R+ +SW
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC--AVLGNLKVGMQIHSLVF 204
++ S + G L++F + + G+ + F+ + AC + L +L G + LVF
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHL-AGGAVLGLVF 180
Query: 205 KCAL-EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
K D V LI+++AK L RVF + + W+ LI YAQ G + EA+
Sbjct: 181 KLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAV 240
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
+LF+ M +G P + T S +L A ++ G+QLHSL +++G S + V+ ++D Y
Sbjct: 241 ELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMY 300
Query: 324 SKC---ELLEESLKTFDEMDEHDVVSWNALIAGHLA-SCHYGEAIELLKDMLFEGHCPNL 379
+K + L + + F+ M +H+V++W AL++G++ + + L ML EG PN
Sbjct: 301 AKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNH 360
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
TYS++L +++ + G+Q H VK V+G+ALV MYA+ G + +AR FD
Sbjct: 361 ITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQ 420
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
L KN+VS++ L G GR ++ ++ + TF ++SA +G++ +G
Sbjct: 421 LYEKNMVSFSGNL-----DGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKG 475
Query: 500 WHYFNSMIR-----DHGISPRM---------------------DH----IASVVHLFACR 529
++ D I + DH S++ A
Sbjct: 476 QRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKH 535
Query: 530 GQTRRAYEFIK---SSPIEPNKVVWRCLLSGCKTHKDLV 565
G RA E ++ ++PN V + +LS C +H LV
Sbjct: 536 GYAARALELFHDMIAAGVKPNDVTYIAVLSAC-SHAGLV 573
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 4/153 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + N L+ MY + + DA ++FDEM + NVISW+++ISG ++ G AL
Sbjct: 483 LKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARAL 542
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS--GLELNSHVSNCLIN 119
F M+ ++PN TY+ +SAC+ G + GKE H RM + GL C+++
Sbjct: 543 ELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKE-HFRMMQKHHGLIPRMEHYACMVD 601
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ G+ GL+ A F+ + + +++ W +LL +
Sbjct: 602 LLGRSGLVEDALDFINEMPCQVDALVWKTLLGA 634
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 102/241 (42%), Gaps = 56/241 (23%)
Query: 1 MITSGFHPNVITY-----------------------------------NHLLLMYVKFSR 25
M+ G PN ITY N L+ MY +
Sbjct: 351 MLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGS 410
Query: 26 INDAQKLFDEMPERNVISWSALISGFS--------QIGMPEVALNYFRLMVCCVLEPNYY 77
I +A+ FD++ E+N++S+S + G QI E+ ++ F
Sbjct: 411 IEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTF------------- 457
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T+ +SA AS G G+ +H ++G + + N L++MY +CG L A VFD
Sbjct: 458 TFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEM 517
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+ N ISW S++S + G L++F +GV ++ + +VL AC+ G +K G
Sbjct: 518 NDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGK 577
Query: 198 Q 198
+
Sbjct: 578 E 578
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 357/651 (54%), Gaps = 1/651 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ +Y K ++ A+++FD+M +++ +SW +++G++ G L F M +
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N + V A A A D GKEIHG + ++ + V+ L+ MY KCG A+ +
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F R+ ++W +++++ Q G L +F + + + + S+L ACA L L
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
K+G IH K ++ D L+++YAKC A F+ + D+ W++LI GY
Sbjct: 447 KLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGY 506
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
AQ+G AID+F K+ S + P T V+ A A + + G +H LI+K+GF S
Sbjct: 507 AQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDC 566
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V N ++D Y+KC L + F++ D D V+WN +IA ++ + H EAI M
Sbjct: 567 HVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRL 626
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
E PN T+ ++L ++ + A G H CI++ GF SN ++G++L+DMYAKCG+L+
Sbjct: 627 ENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDY 686
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
+ K+F+ + K+ VSWN ML GYA HG G A+ ++S+MQE++++ + +F+ VLSAC H
Sbjct: 687 SEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRH 746
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
GLVEEG F+SM + I P ++H A +V L G FIK P+EP+ VW
Sbjct: 747 AGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWG 806
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL C+ H ++ LG A + ++ +P + + ++LS++YA++ W + K R M +
Sbjct: 807 ALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLG 866
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
LKK GCSW EL+NK+H F + Q +H + N L + GYVPD
Sbjct: 867 LKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPD 917
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 167/558 (29%), Positives = 285/558 (51%), Gaps = 5/558 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V L+ MY K + A+++FD+MP+R+V++W+A+I+G SQ P A+++F
Sbjct: 159 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFF 218
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R M +EP+ + + + + IHG ++R + +S VSN LI++Y KC
Sbjct: 219 RSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGLIDLYSKC 276
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A+ VFD ++++ +SW ++++ Y G V L++F + V I++ S S
Sbjct: 277 GDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAF 336
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A A +L+ G +IH + ++ D VA L+ +YAKC + + A ++F +Q DL
Sbjct: 337 LAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLV 396
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
AWSA+I Q G EA+ LF +M + + P+ VT +L A AD+ G+ +H
Sbjct: 397 AWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFT 456
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K S ++ Y+KC +L TF+ M D+V+WN+LI G+ AI
Sbjct: 457 VKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAI 516
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ + P+ T ++ + + ++ G H IVK GF+S+ + +AL+DMY
Sbjct: 517 DMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMY 576
Query: 425 AKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
AKCG L A +F+ +K+ V+WN ++ Y Q+G +EA+ + M+ PN TF
Sbjct: 577 AKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 636
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ VL A ++ EG F++ I G S++ ++A GQ + +
Sbjct: 637 VSVLPAAAYLAAFREGM-AFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMD 695
Query: 544 IEPNKVVWRCLLSGCKTH 561
+ V W +LSG H
Sbjct: 696 -HKDTVSWNAMLSGYAVH 712
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/561 (29%), Positives = 291/561 (51%), Gaps = 12/561 (2%)
Query: 1 MITSGF-HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV 59
+I SGF H + IT HL+ +Y F + + A+ +FD P + I W+++I +++
Sbjct: 55 IIVSGFKHHHSIT--HLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNE 112
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL + MV LEP+ YT+ + AC + + G HG + R GLE + + L++
Sbjct: 113 ALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVD 172
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY K G L A+ VFD +R+ ++W ++++ Q + + F + GV S S
Sbjct: 173 MYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVS 232
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++ L N+++ IH VF+ +F V+ GLI+LY+KC +D+A RVF +
Sbjct: 233 LLNLFPGICKLSNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMV 290
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG--- 296
D +W ++ GYA G E ++LF KM + ++V+ + AF ETI
Sbjct: 291 DQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVS---AVSAFLAAAETIDLEK 347
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+++H ++ S VA ++ Y+KC E++ + F + D+V+W+A+IA +
Sbjct: 348 GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQ 407
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ + EA+ L ++M + PN T +IL +D+ ++ GK HC VK DS++
Sbjct: 408 TGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLST 467
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
G+ALV MYAKCG A F+ +SS+++V+WN+++ GYAQ G A++++ ++ + I
Sbjct: 468 GTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAI 527
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P+ T +GV+ AC + +++G + +I G +++ ++A G A
Sbjct: 528 NPDAGTMVGVVPACALLNDLDQG-TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAE 586
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
+ ++V W +++
Sbjct: 587 FLFNKTDFTKDEVTWNVIIAA 607
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 224/428 (52%), Gaps = 12/428 (2%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG---KCGLLSSAQ 131
NY Y +S+C +IH ++ SG + + +++ LIN+Y KC L A+
Sbjct: 31 NYLHYPRLLSSCKHLNPLL---QIHAQIIVSGFKHHHSITH-LINLYSLFHKCDL---AR 83
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD++ + I W S++ +Y + ++ L+++ + G+ +++ VL AC
Sbjct: 84 SVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGAL 143
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
NL+ G+ H + + LE D F+ GL+++Y+K L A VF + D+ AW+A+I
Sbjct: 144 NLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIA 203
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G +Q CEA+D F M G+ PS V+ + + R +H + + FSS
Sbjct: 204 GLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS 263
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V+N ++D YSKC ++ + + FD+M + D VSW ++AG+ + + E +EL M
Sbjct: 264 --AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMK 321
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
N + + +++ +E GK+ H C ++ DS++++ + L+ MYAKCG
Sbjct: 322 LGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETE 381
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
A+++F L ++LV+W+ ++ Q G EAL ++ MQ K+KPN T + +L AC
Sbjct: 382 KAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACA 441
Query: 492 HIGLVEEG 499
+ L++ G
Sbjct: 442 DLSLLKLG 449
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 84/155 (54%), Gaps = 6/155 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF N + N L+ MY K +++ ++KLF+EM ++ +SW+A++SG++ G + A
Sbjct: 659 IIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRA 718
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM---YRSGLELNSHVSNCL 117
+ F LM ++ + ++V +SAC G G++I M Y +L + C+
Sbjct: 719 IALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYA--CM 776
Query: 118 INMYGKCGLLS-SAQFVFDASLERNSISWVSLLSS 151
+++ G+ GL + F+ +E ++ W +LL S
Sbjct: 777 VDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGS 811
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/591 (34%), Positives = 335/591 (56%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
+ G + CA G+E+H + +SG++ N ++ N L++MY KCG L+ A+ VFD
Sbjct: 99 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
+RN +SW +++ ++ +++ K + + +G + + S+L A L+VG +
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H + K LE + V L+ +YAKC + A +F + ++ W+ LI GYAQ G+
Sbjct: 219 VHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQ 278
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
A++L KM + + P+++T++ +L G+++H II+ G+ +V N
Sbjct: 279 VDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNA 338
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
++ Y KC L+E+ K F ++ DVV+W A++ G+ + EAI+L + M +G P+
Sbjct: 339 LITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPD 398
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T+++ L S ++ GK H +V G+ +V + SALV MYAKCG ++DAR VF+
Sbjct: 399 KMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFN 458
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+S +N+V+W M+ G AQHG REALE + M++ IKP+ TF VLSAC H+GLVEE
Sbjct: 459 QMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEE 518
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
G +F SM D+GI P ++H + V L G A I + P +P VW LLS C
Sbjct: 519 GRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSAC 578
Query: 559 KTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTG 618
+ H D+ G AAE +L DP+D A++ LSN+YA A +++ KVR++M+++ + K+ G
Sbjct: 579 RIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPG 638
Query: 619 CSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
SW E+ K+H F + + +++ + +L+ + + GYVPD + H
Sbjct: 639 QSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLH 689
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 230/438 (52%), Gaps = 1/438 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG PN N LL MY K + DA+++FD + +RN++SW+A+I F A
Sbjct: 122 ILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEA 181
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M +P+ T+V ++A + + G+++H + ++GLEL V L+ M
Sbjct: 182 YKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGM 241
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG +S AQ +FD E+N ++W L++ Y Q G+ L++ +++ VA ++ +
Sbjct: 242 YAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITY 301
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L C L+ G ++H + + + +V LI +Y KC L A ++F ++
Sbjct: 302 TSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPH 361
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+A++ GYAQLG EAIDLF +M G+ P ++TF+ L + + G+ +
Sbjct: 362 RDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSI 421
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H ++ G+S ++ + ++ Y+KC ++++ F++M E +VV+W A+I G
Sbjct: 422 HQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRC 481
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSA 419
EA+E + M +G P+ T++++L+ + + +E G K + G V S
Sbjct: 482 REALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSC 541
Query: 420 LVDMYAKCGRLNDARKVF 437
VD+ + G L +A V
Sbjct: 542 FVDLLGRAGHLEEAENVI 559
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 233/462 (50%), Gaps = 3/462 (0%)
Query: 101 RMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER-NSISWVSLLSSYCQCGEHV 159
R RS L N + SN +S Q +A + ++++ +S C+ G
Sbjct: 19 RCGRSILMFNRYQSNVDTAFELTTPTVSHDQLPGNAGFRKVDTLANSGDVSILCKQGRLK 78
Query: 160 HGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI 219
L I G + +L CA L +L+ G ++H+ + K ++ ++++ L+
Sbjct: 79 EALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 138
Query: 220 NLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEV 279
++YAKC L A RVF I+ ++ +W+A+I + + EA + M +G P +V
Sbjct: 139 SMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKV 198
Query: 280 TFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
TF +L AF + + G+++H I K G V +++ Y+KC + ++ FD++
Sbjct: 199 TFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKL 258
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
E +VV+W LIAG+ A+ELL+ M PN TY++IL + A+E GK
Sbjct: 259 PEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGK 318
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
+ H I++ G+ + + +AL+ MY KCG L +ARK+F L +++V+W M+ GYAQ G
Sbjct: 319 KVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLG 378
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
EA++++ MQ+ IKP+ TF L++C ++EG ++ G S +
Sbjct: 379 FHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVH-AGYSLDVYLQ 437
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+++V ++A G A + + E N V W +++GC H
Sbjct: 438 SALVSMYAKCGSMDDA-RLVFNQMSERNVVAWTAMITGCAQH 478
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/650 (34%), Positives = 358/650 (55%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL MY K + A++LFD MPERN++S+ L+ +Q G E A FR + E
Sbjct: 100 NVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N + + + A +H ++ G + N+ V + LI+ Y C L+S A+ V
Sbjct: 160 VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHV 219
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ + ++++ W +++S Y + + ++F R SG + F+ SVL A L ++
Sbjct: 220 FNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSV 279
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G IH K + + V L+++YAKC + A F I D+ S +I Y
Sbjct: 280 VLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRY 339
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
AQ + +A +LF+++ S ++P+E + S VL A ++ + G+Q+H+ IK+G S
Sbjct: 340 AQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDL 399
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
FV N ++DFY+KC ++ SLK F + + + VSWN ++ G S EA+ + +M
Sbjct: 400 FVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAA 459
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
TYS++L + +I Q HC I K F+++ VIG++L+D YAKCG + DA
Sbjct: 460 QMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDA 519
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
KVF HL ++++SWN ++ GYA HG +ALE++ M ++ ++ ND TF+ +LS C
Sbjct: 520 LKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSST 579
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLV G F+SM DHGI P M+H +V L G+ A +FI P P+ +VWR
Sbjct: 580 GLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRA 639
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LLS C HK++ LGR++AEKIL +P+D + +++LSN+YA A D+ A +RK M+ +
Sbjct: 640 LLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGV 699
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+K G SW E++ ++H FS ++ ++ L++ GY+PD
Sbjct: 700 RKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPD 749
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 221/410 (53%), Gaps = 2/410 (0%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGL--ELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
+ C +RGDAR G+ +HG + R G L+ +N L+NMYGK G L+SA+ +FD ER
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
N +S+V+L+ ++ Q G+ +F R G +++F ++L + + +H
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
S +K + + FV GLI+ Y+ C + A VF+ I D W+A++ Y++
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
A +F KM SG P+ + VL A + + G+ +H IK + V +L
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
D Y+KC ++++ F+ + DV+ + +I+ + S +A EL ++ PN Y
Sbjct: 306 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 365
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
+ S++L +++ +++GKQ H +K G +S++ +G+AL+D YAKC ++ + K+F L
Sbjct: 366 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
N VSWNT++VG++Q GLG EAL ++ MQ ++ T+ VL AC
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 475
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 245/489 (50%), Gaps = 10/489 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N + L+ Y S ++DA+ +F+ + ++ + W+A++S +S+ PE A F
Sbjct: 192 GHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVF 251
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M +PN + + A GK IHG ++ + HV L++MY KC
Sbjct: 252 SKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKC 311
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A+ F+ + I ++S Y Q ++ ++FL +S V +E+S +SVL
Sbjct: 312 GDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVL 371
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC + L G QIH+ K E D FV L++ YAKC +D + ++FS+++ +
Sbjct: 372 QACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEV 431
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ ++ G++Q G EA+ +F +M ++ + ++VT+S VL A A Q+H I
Sbjct: 432 SWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSI 491
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
K F++ T + N+++D Y+KC + ++LK F + E D++SWNA+I+G+ +A+
Sbjct: 492 EKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADAL 551
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFDSNVVIGSALVDM 423
EL M N T+ +L++ S + G + + G ++ + +V +
Sbjct: 552 ELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRL 611
Query: 424 YAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQH---GLGREALEIYSMMQENKIKPN 479
+ GRLNDA + + D S+ + + W +L H LGR +S + +I+P
Sbjct: 612 LGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR-----FSAEKILEIEPQ 666
Query: 480 DNTFIGVLS 488
D T +LS
Sbjct: 667 DETTYVLLS 675
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 163/339 (48%), Gaps = 6/339 (1%)
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFK--CALEFDKFVAMGLINLYAKCEKLDLA 231
+ F+CA L C G+ + G +H V + D F A L+N+Y K L A
Sbjct: 56 GVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASA 115
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG-AFA- 289
R+F + ++ ++ L+ +AQ G A LF ++ G ++ + +L A A
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
D GG +HS K+G FV + ++D YS C L+ ++ F+ + D V W A
Sbjct: 176 DAAGLAGG--VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTA 233
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+++ + + A + M G PN + +++L + +P++ GK H C +K
Sbjct: 234 MVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTL 293
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
D+ +G AL+DMYAKCG + DAR F+ + +++ + M+ YAQ +A E++
Sbjct: 294 NDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFL 353
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+ + + PN+ + VL AC ++ ++ G N I+
Sbjct: 354 RLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 392
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 2/251 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G ++ N L+ Y K + ++ + K+F + + N +SW+ ++ GFSQ G+ E AL
Sbjct: 391 IKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEAL 450
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F M + TY + ACAS R +IH + +S ++ + N LI+ Y
Sbjct: 451 SVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTY 510
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A VF +ER+ ISW +++S Y G+ L++F KS V ++ +
Sbjct: 511 AKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFV 570
Query: 182 SVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-Q 239
++L C+ G + G+ + S+ ++ ++ L + +L+ A + +I
Sbjct: 571 ALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPS 630
Query: 240 LPDLTAWSALI 250
P W AL+
Sbjct: 631 APSAMVWRALL 641
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/658 (32%), Positives = 357/658 (54%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V + L+ +Y + ++DAQ LFD +P+++ + W+ +++G+ + G A+ F
Sbjct: 88 GLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIF 147
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M ++PN T+ +S CAS G ++HG GLEL+S V+N L+ MY KC
Sbjct: 148 LEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKC 207
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L +A+ +FD S + + +SW ++S Y Q G +F +G+ + AS L
Sbjct: 208 QCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFL 267
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
L +LK +IH + + A+ D F+ LI++Y KC +++A ++ D
Sbjct: 268 PCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTV 327
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+ +I GY GK EA++ F + + P+ VTFS + AFA + G++LH I
Sbjct: 328 VCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSI 387
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK V + +LD Y+KC L+ + + F+ + E D + WN++I + GEAI
Sbjct: 388 IKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAI 447
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
L + M EG + + S L+ +++PA+ +GK+ H ++K S++ S+L+DMY
Sbjct: 448 NLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMY 507
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG LN +R+VFD + +N VSWN+++ Y HG +E L ++ M N I+P+ TF+
Sbjct: 508 AKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFL 567
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
G++SAC H G V+EG Y++ M ++GI RM+H A V +F G+ A+E I S P
Sbjct: 568 GIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPF 627
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
P+ VW LL C H ++ L A++ + DP ++ +++L+NV A A W + KV
Sbjct: 628 PPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKV 687
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
R IMKE+ ++K G SW E+ N H F + + ++ V++ L + L GYVP
Sbjct: 688 RSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVP 745
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 285/551 (51%), Gaps = 12/551 (2%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MYV+ + DA+ LF + +W+ +I GF+ +G AL ++ M+ + P+ YT
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
+ V AC + GK +H + GL+ + V + LI +Y + G LS AQ++FD
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
+++S+ W +L+ Y + G+ + +KIFL R S + + + A VL CA L +G Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H + C LE D VA L+ +Y+KC+ L A ++F DL +W+ +I GY Q G
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
EA LF M S+G+ P +TF+ L ++ +++H II+ F+ +
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
++D Y KC +E + K + D V +I+G++ + EA+E + ++ E P
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T+S+I + + A+ GK+ H I+K D +GSA++DMYAKCGRL+ A +VF+
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
++ K+ + WN+M+ +Q+G EA+ ++ M + + + G LSAC ++ +
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHY 480
Query: 499 GWHYFNSMIRDHGISPRMDHIA--SVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRC 553
G MI+ R D A S++ ++A G +RR ++ ++ E N+V W
Sbjct: 481 GKEIHGLMIKG---PLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ----ERNEVSWNS 533
Query: 554 LLSGCKTHKDL 564
++S H DL
Sbjct: 534 IISAYGNHGDL 544
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 7/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI ++ + L+ MY K +N ++++FD M ERN +SW+++IS + G +
Sbjct: 488 MIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKEC 547
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F M+ ++P++ T++G +SAC G G + M G+ C+ +
Sbjct: 548 LALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVAD 607
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHG 161
M+G+ G L A + + ++ W +LL + C H+HG
Sbjct: 608 MFGRAGRLDEAFETINSMPFPPDAGVWGTLLGA-C----HIHG 645
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/672 (34%), Positives = 373/672 (55%), Gaps = 18/672 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N L+ +Y K K+FD + ERN +SW++LIS E+AL FR M+
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 69 CCVLEPNYYTYVGAVSACASRGDARS---GKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
+EP+ +T V V+AC++ GK++H R G ELNS + N L+ MYGK G
Sbjct: 192 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLG 250
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L+S++ + + R+ ++W ++LSS CQ + + L+ GV EF+ +SVL
Sbjct: 251 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 310
Query: 186 ACAVLGNLKVGMQIHSLVFK-CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC+ L L+ G ++H+ K +L+ + FV L+++Y C+++ RVF + +
Sbjct: 311 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 370
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W+A+I GY+Q EA+ LF+ M S+GL+ + T + V+ A +H
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
++K G FV NT++D YS+ ++ +++ F +M++ D+V+WN +I G++ S H+ +A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 364 IELLKDM------LFEGHC-----PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
+ LL M + +G PN T IL + + A+ GK+ H +K +
Sbjct: 491 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 550
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+V +GSALVDMYAKCG L +RKVFD + KN+++WN +++ Y HG G+EA+++ MM
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+KPN+ TFI V +AC H G+V+EG F M D+G+ P DH A VV L G+
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRI 670
Query: 533 RRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
+ AY+ + P + NK W LL + H +L +G AA+ ++ +P S +++L+N+
Sbjct: 671 KEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI 730
Query: 592 YAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
Y+ A +WD+ +VR+ MKE+ ++K+ GCSW E +++H F + Q L + L
Sbjct: 731 YSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Query: 652 SVHLFDGGYVPD 663
+ GYVPD
Sbjct: 791 WERMRKEGYVPD 802
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/526 (27%), Positives = 255/526 (48%), Gaps = 27/526 (5%)
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVS 114
+ E L Y ++V + +P+ Y + + A A D GK+IH +Y+ G ++S V+
Sbjct: 78 LREAVLTYVDMIVLGI-KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVA 136
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N L+N+Y KCG + VFD ERN +SW SL+SS C + L+ F V
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 175 ISEFSCASVLGACAVLG---NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
S F+ SV+ AC+ L L +G Q+H+ + E + F+ L+ +Y K KL +
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASS 255
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+ + DL W+ ++ Q + EA++ +M G+ P E T S VL A + +
Sbjct: 256 KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315
Query: 292 KETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ G++LH+ +K G +FV + ++D Y C+ + + FD M + + WNA+
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375
Query: 351 IAGHLASCHYGEAIELLKDM-LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
IAG+ + H EA+ L M G N T + ++ A + H +VK G
Sbjct: 376 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG 435
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
D + + + L+DMY++ G+++ A ++F + ++LV+WNTM+ GY +AL +
Sbjct: 436 LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLH 495
Query: 470 MMQ--ENKI---------KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
MQ E K+ KPN T + +L +C + + +G I+++ ++ +
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN-LATDVAV 554
Query: 519 IASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+++V ++A C +R+ ++ I + N + W ++ H
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIP----QKNVITWNVIIMAYGMH 596
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 127/269 (47%), Gaps = 20/269 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + N L+ MY + +I+ A ++F +M +R++++W+ +I+G+ E A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 61 LNYFRLMVC-----------CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL 109
L M L+PN T + + +CA+ GKEIH ++ L
Sbjct: 491 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 550
Query: 110 NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
+ V + L++MY KCG L ++ VFD ++N I+W ++ +Y G + + +
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCE 226
GV +E + SV AC+ G + G++I ++ + D + +++L +
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC--VVDLLGRAG 668
Query: 227 KLDLASRVFSNIQLPDLT---AWSALIGG 252
++ A ++ N+ D AWS+L+G
Sbjct: 669 RIKEAYQLM-NMMPRDFNKAGAWSSLLGA 696
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/673 (33%), Positives = 380/673 (56%), Gaps = 12/673 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP---ERNVISWSALISGFSQIGMP 57
+I P+ + YN L+ +Y K A+ +F+ M +R+V+SWSA+++ + G
Sbjct: 88 LIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRE 147
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNC 116
A+ F + L PN Y Y + AC++ G+ G + ++G E + V
Sbjct: 148 LDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCS 207
Query: 117 LINMYGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
LI+M+ K +A VFD E N ++W +++ Q G ++ FL SG
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE---KLDLAS 232
+F+ +SV ACA L NL +G Q+HS + L D V L+++YAKC +D
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCR 325
Query: 233 RVFSNIQLPDLTAWSALIGGYAQ-LGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFAD 290
+VF ++ + +W+ALI GY + A EAI+LF +M + G + P+ TFS A +
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ + G+Q+ K G +S + VAN+V+ + K + +E++ + F+ + E ++VS+N
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
+ G + ++ +A +LL ++ + +T++++L+ +++ +I G+Q H +VK G
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
N + +AL+ MY+KCG ++ A +VF+ + ++N++SW +M+ G+A+HG LE ++
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQ 565
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M E +KPN+ T++ +LSAC H+GLV EGW +FNSM DH I P+M+H A +V L G
Sbjct: 566 MIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAG 625
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN 590
A+EFI + P + + +VWR L C+ H + LG+ AA KIL DP + +A+I LSN
Sbjct: 626 LLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSN 685
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQ 650
+YA A W+E+ ++R+ MKE++L K+ GCSW E+ +K+H F A +++ +++
Sbjct: 686 IYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDR 745
Query: 651 LSVHLFDGGYVPD 663
L + GYVPD
Sbjct: 746 LITEIKRCGYVPD 758
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 254/497 (51%), Gaps = 20/497 (4%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T+ + +C D R GK +H R+ +E +S + N LI++Y K G + A+ VF+
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 138 L---ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
+R+ +SW ++++ Y G + +K+F+ + G+ +++ +V+ AC+ +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 195 VGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEK-LDLASRVFSNIQLPDLTAWSALIGG 252
VG + K E D V LI+++ K E + A +VF + ++ W+ +I
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Q+G EAI F+ M SG + T S V A A+++ G+QLHS I+ G
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--V 301
Query: 313 TFVANTVLDFYSKCEL---LEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EAIELLK 368
V +++D Y+KC +++ K FD M++H V+SW ALI G++ +C+ EAI L
Sbjct: 302 DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 369 DMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+M+ +GH PN +T+S+ ++ GKQ K G SN + ++++ M+ K
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
R+ DA++ F+ LS KNLVS+NT L G ++ +A ++ S + E ++ + TF +L
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ---TRRAYEFIKSSPI 544
S ++G + +G +S + G+S +++ +++ G R + F+++
Sbjct: 482 SGVANVGSIRKG-EQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR-- 538
Query: 545 EPNKVVWRCLLSGCKTH 561
N + W +++G H
Sbjct: 539 --NVISWTSMITGFAKH 553
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 200/405 (49%), Gaps = 20/405 (4%)
Query: 166 LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC 225
L++R + + +S+L +C + ++G +H+ + + +E D + LI+LY+K
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 226 EKLDLASRVFSNIQL---PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
A VF ++ D+ +WSA++ Y G+ +AI +FV+ GL+P++ ++
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCE-LLEESLKTFDEMD 340
V+ A ++ GR ++K G F S V +++D + K E E + K FD+M
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
E +VV+W +I + EAI DM+ G + +T S++ + +++ + GKQ
Sbjct: 231 ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQ 290
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKC---GRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
H ++ G +V +LVDMYAKC G ++D RKVFD + +++SW ++ GY +
Sbjct: 291 LHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK 348
Query: 458 H-GLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
+ L EA+ ++S M+ + ++PN TF AC ++ G + G++
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK-RGLASN 407
Query: 516 MDHIASVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRCLLSG 557
SV+ +F + +RA+E S E N V + L G
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFE----SLSEKNLVSYNTFLDG 448
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/672 (34%), Positives = 373/672 (55%), Gaps = 18/672 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N L+ +Y K K+FD + ERN +SW++LIS E+AL FR M+
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 69 CCVLEPNYYTYVGAVSACASRGDARS---GKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
+EP+ +T V V+AC++ GK++H R G ELNS + N L+ MYGK G
Sbjct: 192 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLG 250
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L+S++ + + R+ ++W ++LSS CQ + + L+ GV EF+ +SVL
Sbjct: 251 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 310
Query: 186 ACAVLGNLKVGMQIHSLVFK-CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC+ L L+ G ++H+ K +L+ + FV L+++Y C+++ RVF + +
Sbjct: 311 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 370
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W+A+I GY+Q EA+ LF+ M S+GL+ + T + V+ A +H
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
++K G FV NT++D YS+ ++ +++ F +M++ D+V+WN +I G++ S H+ +A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 364 IELLKDM------LFEGHC-----PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
+ LL M + +G PN T IL + + A+ GK+ H +K +
Sbjct: 491 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 550
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+V +GSALVDMYAKCG L +RKVFD + KN+++WN +++ Y HG G+EA+++ MM
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+KPN+ TFI V +AC H G+V+EG F M D+G+ P DH A VV L G+
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRI 670
Query: 533 RRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
+ AY+ + P + NK W LL + H +L +G AA+ ++ +P S +++L+N+
Sbjct: 671 KEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI 730
Query: 592 YAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
Y+ A +WD+ +VR+ MKE+ ++K+ GCSW E +++H F + Q L + L
Sbjct: 731 YSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Query: 652 SVHLFDGGYVPD 663
+ GYVPD
Sbjct: 791 WERMRKEGYVPD 802
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/526 (27%), Positives = 255/526 (48%), Gaps = 27/526 (5%)
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVS 114
+ E L Y ++V + +P+ Y + + A A D GK+IH +Y+ G ++S V+
Sbjct: 78 LREAVLTYVDMIVLGI-KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVA 136
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N L+N+Y KCG + VFD ERN +SW SL+SS C + L+ F V
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 175 ISEFSCASVLGACAVLG---NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
S F+ SV+ AC+ L L +G Q+H+ + E + F+ L+ +Y K KL +
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASS 255
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+ + DL W+ ++ Q + EA++ +M G+ P E T S VL A + +
Sbjct: 256 KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315
Query: 292 KETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ G++LH+ +K G +FV + ++D Y C+ + + FD M + + WNA+
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375
Query: 351 IAGHLASCHYGEAIELLKDM-LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
IAG+ + H EA+ L M G N T + ++ A + H +VK G
Sbjct: 376 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG 435
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
D + + + L+DMY++ G+++ A ++F + ++LV+WNTM+ GY +AL +
Sbjct: 436 LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLH 495
Query: 470 MMQ--ENKI---------KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
MQ E K+ KPN T + +L +C + + +G I+++ ++ +
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN-LATDVAV 554
Query: 519 IASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+++V ++A C +R+ ++ I + N + W ++ H
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIP----QKNVITWNVIIMAYGMH 596
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 127/269 (47%), Gaps = 20/269 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + N L+ MY + +I+ A ++F +M +R++++W+ +I+G+ E A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 61 LNYFRLMVC-----------CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL 109
L M L+PN T + + +CA+ GKEIH ++ L
Sbjct: 491 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 550
Query: 110 NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
+ V + L++MY KCG L ++ VFD ++N I+W ++ +Y G + + +
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCE 226
GV +E + SV AC+ G + G++I ++ + D + +++L +
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC--VVDLLGRAG 668
Query: 227 KLDLASRVFSNIQLPDLT---AWSALIGG 252
++ A ++ N+ D AWS+L+G
Sbjct: 669 RIKEAYQLM-NMMPRDFNKAGAWSSLLGA 696
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/673 (33%), Positives = 380/673 (56%), Gaps = 12/673 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP---ERNVISWSALISGFSQIGMP 57
+I P+ + YN L+ +Y K A+ +F+ M +R+V+SWSA+++ + G
Sbjct: 88 LIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRE 147
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNC 116
A+ F + L PN Y Y + AC++ G+ G + ++G E + V
Sbjct: 148 LDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCS 207
Query: 117 LINMYGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
LI+M+ K +A VFD E N ++W +++ Q G ++ FL SG
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE---KLDLAS 232
+F+ +SV ACA L NL +G Q+HS + L D V L+++YAKC +D
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCR 325
Query: 233 RVFSNIQLPDLTAWSALIGGYAQ-LGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFAD 290
+VF ++ + +W+ALI GY + A EAI+LF +M + G + P+ TFS A +
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ + G+Q+ K G +S + VAN+V+ + K + +E++ + F+ + E ++VS+N
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
+ G + ++ +A +LL ++ + +T++++L+ +++ +I G+Q H +VK G
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
N + +AL+ MY+KCG ++ A +VF+ + ++N++SW +M+ G+A+HG LE ++
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQ 565
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M E +KPN+ T++ +LSAC H+GLV EGW +FNSM DH I P+M+H A +V L G
Sbjct: 566 MIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAG 625
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN 590
A+EFI + P + + +VWR L C+ H + LG+ AA KIL DP + +A+I LSN
Sbjct: 626 LLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSN 685
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQ 650
+YA A W+E+ ++R+ MKE++L K+ GCSW E+ +K+H F A +++ +++
Sbjct: 686 IYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDR 745
Query: 651 LSVHLFDGGYVPD 663
L + GYVPD
Sbjct: 746 LITEIKRCGYVPD 758
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 262/516 (50%), Gaps = 21/516 (4%)
Query: 60 ALNYFRLMVCCVLEP-NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
A++ LM + P + T+ + +C D R GK +H R+ +E +S + N LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 119 NMYGKCGLLSSAQFVFDASL---ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
++Y K G + A+ VF+ +R+ +SW ++++ Y G + +K+F+ + G+
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEK-LDLASR 233
+++ +V+ AC+ + VG + K E D V LI+++ K E + A +
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
VF + ++ W+ +I Q+G EAI F+ M SG + T S V A A+++
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL---LEESLKTFDEMDEHDVVSWNAL 350
G+QLHS I+ G V +++D Y+KC +++ K FD M++H V+SW AL
Sbjct: 285 LSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 351 IAGHLASCHYG-EAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
I G++ +C+ EAI L +M+ +GH PN +T+S+ ++ GKQ K
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
G SN + ++++ M+ K R+ DA++ F+ LS KNLVS+NT L G ++ +A ++
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
S + E ++ + TF +LS ++G + +G +S + G+S +++ +++
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKG-EQIHSQVVKLGLSCNQPVCNALISMYSK 521
Query: 529 RGQ---TRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
G R + F+++ N + W +++G H
Sbjct: 522 CGSIDTASRVFNFMENR----NVISWTSMITGFAKH 553
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 356/651 (54%), Gaps = 1/651 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ +Y K ++ A+++FD+M +++ +SW +++G++ G L F M +
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N + V A A A D GKEIHG + ++ + V+ L+ MY KCG A+ +
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F R+ ++W +++++ Q G L +F + + + + S+L ACA L L
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
K+G IH K ++ D L+++YAKC A F+ + D+ W++LI GY
Sbjct: 447 KLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGY 506
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
AQ+G AID+F K+ S + P T V+ A A + + G +H LI+K+GF S
Sbjct: 507 AQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDC 566
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V N ++D Y+KC L + F++ D D V+WN +IA ++ + H EAI M
Sbjct: 567 HVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRL 626
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
E PN T+ ++L ++ + A G H CI++ GF SN ++G++L+DMYAKCG+L
Sbjct: 627 ENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXY 686
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
+ K+F+ + K+ VSWN ML GYA HG G A+ ++S+MQE++++ + +F+ VLSAC H
Sbjct: 687 SEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRH 746
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
GLVEEG F+SM + I P ++H A +V L G FIK P+EP+ VW
Sbjct: 747 XGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWG 806
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL C+ H ++ LG A + ++ +P + + ++LS++YA++ W + K R M +
Sbjct: 807 ALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLG 866
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
LKK GCSW EL+NK+H F + Q +H + N L + GYVPD
Sbjct: 867 LKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPD 917
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/558 (29%), Positives = 287/558 (51%), Gaps = 5/558 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V L+ MY K + A+++FD+MP+R+V++W+A+I+G SQ P A+++F
Sbjct: 159 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFF 218
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R M +EP+ + + + + IHG ++R + +S VSN LI++Y KC
Sbjct: 219 RSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGLIDLYSKC 276
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A+ VFD ++++ +SW ++++ Y G V L++F + V I++ S S
Sbjct: 277 GDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAF 336
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A A +L+ G +IH + ++ D VA L+ +YAKC + + A ++F +Q DL
Sbjct: 337 LAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLV 396
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
AWSA+I Q G EA+ LF +M + + P+ VT +L A AD+ G+ +H
Sbjct: 397 AWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFT 456
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K S ++ Y+KC +L TF+ M D+V+WN+LI G+ AI
Sbjct: 457 VKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAI 516
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ + P+ T ++ + + ++ G H IVK GF+S+ + +AL+DMY
Sbjct: 517 DMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMY 576
Query: 425 AKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
AKCG L A +F+ +K+ V+WN ++ Y Q+G +EA+ + M+ PN TF
Sbjct: 577 AKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 636
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ VL A ++ EG + +I+ +S + S++ ++A GQ + +
Sbjct: 637 VSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVG-NSLIDMYAKCGQLXYSEKLFNEMD 695
Query: 544 IEPNKVVWRCLLSGCKTH 561
+ V W +LSG H
Sbjct: 696 -HKDTVSWNAMLSGYAVH 712
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 163/561 (29%), Positives = 291/561 (51%), Gaps = 12/561 (2%)
Query: 1 MITSGF-HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV 59
+I SGF H + IT HL+ +Y F + + A+ +FD P + I W+++I +++
Sbjct: 55 IIVSGFKHHHSIT--HLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNE 112
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL + MV LEP+ YT+ + AC + + G HG + R GLE + + L++
Sbjct: 113 ALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVD 172
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY K G L A+ VFD +R+ ++W ++++ Q + + F + GV S S
Sbjct: 173 MYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVS 232
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++ L N+++ IH VF+ +F V+ GLI+LY+KC +D+A RVF +
Sbjct: 233 LLNLFPGICKLSNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMV 290
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG--- 296
D +W ++ GYA G E ++LF KM + ++V+ + AF ETI
Sbjct: 291 DQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVS---AVSAFLAAAETIDLEK 347
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+++H ++ S VA ++ Y+KC E++ + F + D+V+W+A+IA +
Sbjct: 348 GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQ 407
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ + EA+ L ++M + PN T +IL +D+ ++ GK HC VK DS++
Sbjct: 408 TGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLST 467
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
G+ALV MYAKCG A F+ +SS+++V+WN+++ GYAQ G A++++ ++ + I
Sbjct: 468 GTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAI 527
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P+ T +GV+ AC + +++G + +I G +++ ++A G A
Sbjct: 528 NPDAGTMVGVVPACALLNDLDQG-TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAE 586
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
+ ++V W +++
Sbjct: 587 FLFNKTDFTKDEVTWNVIIAA 607
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 224/428 (52%), Gaps = 12/428 (2%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG---KCGLLSSAQ 131
NY Y +S+C +IH ++ SG + + +++ LIN+Y KC L A+
Sbjct: 31 NYLHYPRLLSSCKHLNPLL---QIHAQIIVSGFKHHHSITH-LINLYSLFHKCDL---AR 83
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD++ + I W S++ +Y + ++ L+++ + G+ +++ VL AC
Sbjct: 84 SVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGAL 143
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
NL+ G+ H + + LE D F+ GL+++Y+K L A VF + D+ AW+A+I
Sbjct: 144 NLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIA 203
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G +Q CEA+D F M G+ PS V+ + + R +H + + FSS
Sbjct: 204 GLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS 263
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V+N ++D YSKC ++ + + FD+M + D VSW ++AG+ + + E +EL M
Sbjct: 264 --AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMK 321
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
N + + +++ +E GK+ H C ++ DS++++ + L+ MYAKCG
Sbjct: 322 LGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETE 381
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
A+++F L ++LV+W+ ++ Q G EAL ++ MQ K+KPN T + +L AC
Sbjct: 382 KAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACA 441
Query: 492 HIGLVEEG 499
+ L++ G
Sbjct: 442 DLSLLKLG 449
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF N + N L+ MY K ++ ++KLF+EM ++ +SW+A++SG++ G + A
Sbjct: 659 IIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRA 718
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM---YRSGLELNSHVSNCL 117
+ F LM ++ + ++V +SAC G G++I M Y +L + C+
Sbjct: 719 IALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYA--CM 776
Query: 118 INMYGKCGLLS-SAQFVFDASLERNSISWVSLLSS 151
+++ G+ GL + F+ +E ++ W +LL S
Sbjct: 777 VDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGS 811
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/661 (33%), Positives = 355/661 (53%), Gaps = 8/661 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N L+ MY K + +A K+F+ MPERN++SW+++I GFS+ G + + N FR M+
Sbjct: 135 DVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREML 194
Query: 69 CC--VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
P+ T V + CA D G +HG + GL V+N LI+MY KC
Sbjct: 195 VGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRF 254
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR----KSGVAISEFSCAS 182
LS AQ +FD + ++N +SW S++ Y + E +LL + + + EF+ +
Sbjct: 255 LSEAQLLFDKNDKKNIVSWNSMIGGYAR--EEDVCRTFYLLQKMQTEDAKMKADEFTILN 312
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
VL C L+ ++H ++ L+ ++ VA I Y +C L + RVF +
Sbjct: 313 VLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKT 372
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+++W+AL+ GYAQ +A+DL+++M SGL P T +L A + +K G ++H
Sbjct: 373 VSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHG 432
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
++ G + F+ ++L Y C + FD M+ +VSWN +IAG+ + E
Sbjct: 433 FALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDE 492
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
AI L + ML +G P + S + A+ GK+ HC +K ++ + S+++D
Sbjct: 493 AINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIID 552
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MYAK G + ++++FD L K++ SWN ++ GY HG G+EALE++ M +KP+D T
Sbjct: 553 MYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFT 612
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F G+L AC H GLVE+G YFN M+ H I P+++H VV + G+ A I+
Sbjct: 613 FTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEM 672
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
P +P+ +W LLS C+ H +L LG A K+L +PE ++++SN++A + WD+
Sbjct: 673 PGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVR 732
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+VR MK+ L+KD GCSW E+ K+H F + ++ E +L V + GY P
Sbjct: 733 RVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTP 792
Query: 663 D 663
D
Sbjct: 793 D 793
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 155/568 (27%), Positives = 287/568 (50%), Gaps = 15/568 (2%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
++ F + + ++ MY +D++ +FD++ +N+ W+A++S +++ + E A++
Sbjct: 27 STQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMS 86
Query: 63 YFRLMVCCVL-EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F ++ +P+ +T + ACA D G+ IHG + L + V N LI MY
Sbjct: 87 IFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMY 146
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG---EHVHGLKIFLLSRKSGVAISEF 178
GKCGL+ A VF+ ERN +SW S++ + + G E + + L+ +S V
Sbjct: 147 GKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVP-DVA 205
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +VL CA +++ GM +H L K L + V LI++Y+KC L A +F
Sbjct: 206 TLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKN 265
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS--SGLMPSEVTFSYVLGAFADVKETIG 296
++ +W+++IGGYA+ C L KM + + + E T VL + E
Sbjct: 266 DKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQS 325
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
++LH + G S VAN + Y++C L S + FD MD V SWNAL+ G+
Sbjct: 326 LKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQ 385
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ +A++L M G P+ +T ++L S + ++ +G++ H ++ G + I
Sbjct: 386 NSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFI 445
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
G +L+ +Y CG+ A+ +FD + ++LVSWN M+ GY+Q+GL EA+ ++ M + I
Sbjct: 446 GISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGI 505
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA---CRGQTR 533
+P + + V AC + + G ++ H ++ + +S++ ++A C G ++
Sbjct: 506 QPYEIAIMCVCGACSQLSALRLGKELHCFALKAH-LTEDIFVSSSIIDMYAKGGCIGLSQ 564
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
R ++ ++ E + W +++G H
Sbjct: 565 RIFDRLR----EKDVASWNVIIAGYGIH 588
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 253/496 (51%), Gaps = 17/496 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G + ++ N L+ MY K +++AQ LFD+ ++N++SW+++I G+++ +V ++
Sbjct: 234 GLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAR--EEDVCRTFY 291
Query: 65 RLMVC----CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L ++ + +T + + C R + +S KE+HG +R GL+ N V+N I
Sbjct: 292 LLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAA 351
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG L S++ VFD + SW +LL Y Q + L ++L SG+ F+
Sbjct: 352 YTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTI 411
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L AC+ + +L G +IH + L D F+ + L++LY C K A +F ++
Sbjct: 412 GSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEH 471
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
L +W+ +I GY+Q G EAI+LF +M S G+ P E+ V GA + + G++L
Sbjct: 472 RSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKEL 531
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +K + FV+++++D Y+K + S + FD + E DV SWN +IAG+
Sbjct: 532 HCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRG 591
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVV 415
EA+EL + ML G P+ +T++ IL S +E G + + ++P +
Sbjct: 592 KEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTC 651
Query: 416 IGSALVDMYAKCGRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHG-LGREALEIYSMMQE 473
+ VDM + GR++DA ++ + + + W+++L HG LG +++
Sbjct: 652 V----VDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLEL 707
Query: 474 NKIKPNDNTFIGVLSA 489
KP + I L A
Sbjct: 708 EPEKPENYVLISNLFA 723
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 167/316 (52%), Gaps = 6/316 (1%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA-MGLINLYAKCEKLDLASRVFSNIQLP 241
+L AC +++VG ++H +V + FV +I +Y+ C + VF ++
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L W+A++ Y + +A+ +F ++ S + P T V+ A A + + G+ +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + KM S FV N ++ Y KC L+EE++K F+ M E ++VSWN++I G +
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 361 GEAIELLKDMLF--EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
E+ ++ML E P++ T +L + + IE G H VK G + +++ +
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA-QHGLGREALEIYSMMQEN-KI 476
+L+DMY+KC L++A+ +FD KN+VSWN+M+ GYA + + R + M E+ K+
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKM 303
Query: 477 KPNDNTFIGVLSACVH 492
K ++ T + VL C+
Sbjct: 304 KADEFTILNVLPVCLE 319
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 154/313 (49%), Gaps = 8/313 (2%)
Query: 284 VLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT-VLDFYSKCELLEESLKTFDEMDEH 342
+L A K+ GR+LH ++ FV NT ++ YS C +S FD++
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDML-FEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
++ WNA+++ + + + +A+ + +++ H P+ +T ++ + + + G+
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H K S+V +G+AL+ MY KCG + +A KVF+H+ +NLVSWN+++ G++++G
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 462 REALEIYSMM--QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
+E+ + M E P+ T + VL C +E+G ++ G++ +
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVK-LGLNEELMVN 242
Query: 520 ASVVHLFA-CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD 578
S++ +++ CR + F K+ + N V W ++ G +D+ Y +K+ + D
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKND--KKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTED 300
Query: 579 PEDTSAHIMLSNV 591
+ + + NV
Sbjct: 301 AKMKADEFTILNV 313
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/603 (34%), Positives = 352/603 (58%), Gaps = 7/603 (1%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG 95
MP+RNV+SW++LISG++Q+G +N F+ L + +T+ A+S C D R G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
+ IH + SGL ++N LI+MY KCG + A+ VF+++ E +S+SW SL++ Y +
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACA--VLGNLKVGMQIHSLVFKCALEFDKF 213
G + L++ + + G+ ++ ++ S L AC +++ G +H K L+ D
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK-----ACEAIDLFVK 268
V L++ YAK L+ A+++F + P++ ++A+I G+ Q+ A EA+ LF +
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M S G+ PSE TFS +L A + ++ G+Q+H+ I K S F+ N +++ YS
Sbjct: 241 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGS 300
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+E+ LK F + DVVSW +LI GH+ + + + L ++LF G P+ +T S +L+
Sbjct: 301 IEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSA 360
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+++ A++ G+Q H +K G + +I ++ + MYAKCG ++ A F + ++VSW
Sbjct: 361 CANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSW 420
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+ M+ AQHG +EA++++ +M+ + I PN TF+GVL AC H GLVEEG YF M +
Sbjct: 421 SVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKK 480
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
DHGI+P + H A +V L G+ A FI S E + V+WR LLS C+ HK G+
Sbjct: 481 DHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGK 540
Query: 569 YAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKM 628
AE+++ +PE +++++L N+Y +A + ++R +MK++ +KK+ G SW E+ N +
Sbjct: 541 RVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVV 600
Query: 629 HYF 631
H F
Sbjct: 601 HSF 603
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 229/461 (49%), Gaps = 9/461 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ SG V+ N L+ MY K RI+ A+ +F+ E + +SW++LI+G+ +IG +
Sbjct: 67 ITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEM 126
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASR--GDARSGKEIHGRMYRSGLELNSHVSNCLI 118
L M+ L N Y A+ AC S GK +HG + GL+L+ V L+
Sbjct: 127 LRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALL 186
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHV-----HGLKIFLLSRKSGV 173
+ Y K G L A +F + N + + ++++ + Q + +F + G+
Sbjct: 187 DTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGM 246
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
SEF+ +S+L AC+ + + G QIH+ +FK L+ D+F+ L+ LY+ ++ +
Sbjct: 247 KPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLK 306
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
F + D+ +W++LI G+ Q G+ + LF ++ SG P E T S +L A A++
Sbjct: 307 CFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAA 366
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G Q+H+ IK G +FT + N+ + Y+KC ++ + TF E D+VSW+ +I+
Sbjct: 367 VKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISS 426
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDS 412
+ EA++L + M G PN T+ +L S +E G + + K G
Sbjct: 427 NAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITP 486
Query: 413 NVVIGSALVDMYAKCGRLNDARK-VFDHLSSKNLVSWNTML 452
NV + +VD+ + GRL +A + D + V W ++L
Sbjct: 487 NVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLL 527
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +G I N + MY K I+ A F E +++SWS +IS +Q G + A+
Sbjct: 378 IKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAV 437
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
+ F LM + PN+ T++G + AC+ G G M + G+ N S C++++
Sbjct: 438 DLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDL 497
Query: 121 YGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
G+ G L+ A+ F+ D+ E + + W SLLS+
Sbjct: 498 LGRAGRLAEAESFIMDSGFEGDPVMWRSLLSA 529
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/678 (34%), Positives = 378/678 (55%), Gaps = 30/678 (4%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N L+ +Y K K+FD + ERN +SW++LIS E+AL FR M+
Sbjct: 45 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 104
Query: 69 CCVLEPNYYTYVGAVSACASRGDARS---GKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
+EP+ +T V V+AC++ GK++H R G ELNS + N L+ MYGK G
Sbjct: 105 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLG 163
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L+S++ + + R+ ++W ++LSS CQ + + L+ GV EF+ +SVL
Sbjct: 164 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 223
Query: 186 ACAVLGNLKVGMQIHSLVFK-CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC+ L L+ G ++H+ K +L+ + FV L+++Y C+++ RVF + +
Sbjct: 224 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 283
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVL------GAFADVKETIGG 297
W+A+I GY+Q EA+ LF+ M S+GL+ + T + V+ GAF+ KE I
Sbjct: 284 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAI-- 340
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
H ++K G FV NT++D YS+ ++ +++ F +M++ D+V+WN +I G++ S
Sbjct: 341 ---HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 397
Query: 358 CHYGEAIELLKDM------LFEGHC-----PNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
H+ +A+ LL M + +G PN T IL + + A+ GK+ H +
Sbjct: 398 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 457
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
K ++V +GSALVDMYAKCG L +RKVFD + KN+++WN +++ Y HG G+EA++
Sbjct: 458 KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 517
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
+ MM +KPN+ TFI V +AC H G+V+EG F M D+G+ P DH A VV L
Sbjct: 518 LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLL 577
Query: 527 ACRGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
G+ + AY+ + P + NK W LL + H +L +G AA+ ++ +P S +
Sbjct: 578 GRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHY 637
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLH 645
++L+N+Y+ A +WD+ +VR+ MKE+ ++K+ GCSW E +++H F + Q L
Sbjct: 638 VLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLS 697
Query: 646 EVMNQLSVHLFDGGYVPD 663
+ L + GYVPD
Sbjct: 698 GYLETLWERMRKEGYVPD 715
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 250/515 (48%), Gaps = 26/515 (5%)
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLINMYGKCG 125
M+ ++P+ Y + + A A D GK+IH +Y+ G ++S V+N L+N+Y KCG
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ VFD ERN +SW SL+SS C + L+ F V S F+ SV+
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 186 ACAVLG---NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
AC+ L L +G Q+H+ + E + F+ L+ +Y K KL + + + D
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 179
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
L W+ ++ Q + EA++ +M G+ P E T S VL A + ++ G++LH+
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 239
Query: 303 LIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+K G +FV + ++D Y C+ + + FD M + + WNA+IAG+ + H
Sbjct: 240 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 299
Query: 362 EAIELLKDM-LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ L M G N T + ++ A + H +VK G D + + + L
Sbjct: 300 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 359
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ--ENKI-- 476
+DMY++ G+++ A ++F + ++LV+WNTM+ GY +AL + MQ E K+
Sbjct: 360 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 419
Query: 477 -------KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-- 527
KPN T + +L +C + + +G I+++ ++ + +++V ++A
Sbjct: 420 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN-LATDVAVGSALVDMYAKC 478
Query: 528 -CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
C +R+ ++ I + N + W ++ H
Sbjct: 479 GCLQMSRKVFDQIP----QKNVITWNVIIMAYGMH 509
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 127/269 (47%), Gaps = 20/269 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + N L+ MY + +I+ A ++F +M +R++++W+ +I+G+ E A
Sbjct: 344 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 403
Query: 61 LNYFRLMVC-----------CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL 109
L M L+PN T + + +CA+ GKEIH ++ L
Sbjct: 404 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 463
Query: 110 NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
+ V + L++MY KCG L ++ VFD ++N I+W ++ +Y G + + +
Sbjct: 464 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 523
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCE 226
GV +E + SV AC+ G + G++I ++ + D + +++L +
Sbjct: 524 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC--VVDLLGRAG 581
Query: 227 KLDLASRVFSNIQLPDLT---AWSALIGG 252
++ A ++ N+ D AWS+L+G
Sbjct: 582 RIKEAYQLM-NMMPRDFNKAGAWSSLLGA 609
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/623 (32%), Positives = 344/623 (55%)
Query: 47 LISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG 106
++ GF+++G FR ++ C P+ YT + AC + + G+ IH +Y+ G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 107 LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
L+L+ V L++MY KC + A+F+FD ER+ ++W ++ Y +CG+ L +F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
R+ GV + + +V+ ACA LG + I + + + D + +I++YAKC
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
++ A +F ++ ++ +WSA+I Y G+ +A+DLF M SSG++P ++T + +L
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
A +D+K GR +H ++ K G FV ++D Y KC +E++ FD+M E D+V+
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT 300
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
W +I G+ + E++ L M EG P+ ++ + + A+ + I
Sbjct: 301 WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ 360
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
+ F +V++G+A++DM+AKCG + AR++FD + KN++SW+ M+ Y HG GR+AL+
Sbjct: 361 RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 420
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
++ MM + I PN T + +L AC H GLVEEG +F+ M D+ + + H VV L
Sbjct: 421 LFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLL 480
Query: 527 ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI 586
G+ A + I+S +E ++ +W L C+THKD+VL AA +L P++ +I
Sbjct: 481 GRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYI 540
Query: 587 MLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHE 646
+LSN+YA A W++ AK R +M ++ LKK G +W E+ NK H FS + +++E
Sbjct: 541 LLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYE 600
Query: 647 VMNQLSVHLFDGGYVPDPIYSSH 669
++ L L GYVPD + H
Sbjct: 601 MLKSLGNKLELVGYVPDTNFVLH 623
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 237/445 (53%), Gaps = 2/445 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MYVK I DA+ LFD+M ER++++W+ +I G+++ G +L F M + P+
Sbjct: 71 LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPD 130
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
V V ACA G + I + R +L+ + +I+MY KCG + SA+ +FD
Sbjct: 131 KVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFD 190
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
E+N ISW +++++Y G+ L +F + SG+ + + AS+L AC+ L NL++
Sbjct: 191 RMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQM 250
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G IH +V+K L+ D FV L+++Y KC +++ A +F + DL W+ +IGGYA+
Sbjct: 251 GRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAE 310
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G A E++ LF KM G++P +V V+ A A + R + I + F +
Sbjct: 311 CGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVIL 370
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
++D ++KC +E + + FD M+E +V+SW+A+IA + +A++L ML G
Sbjct: 371 GTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGI 430
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDAR 434
PN T ++L S +E G + + + ++V + +VD+ + GRL++A
Sbjct: 431 LPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEAL 490
Query: 435 KVFDHLS-SKNLVSWNTMLVGYAQH 458
K+ + ++ K+ W L H
Sbjct: 491 KLIESMTVEKDEGLWGAFLGACRTH 515
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 186/354 (52%), Gaps = 10/354 (2%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F +VI ++ MY K + A+++FD M E+NVISWSA+I+ + G AL+ FR
Sbjct: 162 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 221
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
+M+ + P+ T + AC+ + + G+ IH +Y+ GL+L+ V L++MYGKC
Sbjct: 222 MMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCR 281
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ A+F+FD ER+ ++W ++ Y +CG L +F R+ GV + + +V+
Sbjct: 282 EIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVF 341
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
ACA LG + I + + + D + +I+++AKC ++ A +F ++ ++ +
Sbjct: 342 ACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVIS 401
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
WSA+I Y G+ +A+DLF M SG++P+++T +L A + G + SL+
Sbjct: 402 WSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLM- 460
Query: 306 KMGFSSFTFVANT-----VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
+ ++ A+ V+D + L+E+LK + M E D W A +
Sbjct: 461 ---WEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 511
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/662 (33%), Positives = 377/662 (56%), Gaps = 5/662 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I++G + L+ MYV + +K+FD++ V W+ L+S +++IG +
Sbjct: 120 IISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRES 179
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F+ M + N YT+ + A+ G + K +HG + + G N+ V N LI
Sbjct: 180 VSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAA 239
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + SA +FD E + +SW S+++ G +GL+IF+ GV + +
Sbjct: 240 YFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTL 299
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL ACA +GNL +G +H K + + L+++Y+KC L+ A+ VF +
Sbjct: 300 VSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGD 359
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W+++I Y + G +AI LF +M S G+ P T + ++ A A GR +
Sbjct: 360 TTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV 419
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS +IK G S V N +++ Y+KC +EE+ F ++ D+VSWN +I G+ +
Sbjct: 420 HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLP 479
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+EL DM + P+ T + +L + + A++ G++ H I++ G+ S++ + AL
Sbjct: 480 NEALELFLDMQKQFK-PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACAL 538
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAKCG L A+ +FD + K+L+SW M+ GY HG G EA+ ++ M+ I+P++
Sbjct: 539 VDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDE 598
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
++F +L+AC H GL+ EGW +FNSM + G+ P+++H A VV L A G +AY+FI+
Sbjct: 599 SSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIE 658
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
S PI+P+ +W LLSGC+ H D+ L AE I +P++T +++L+NVYAEA W+E
Sbjct: 659 SMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEE 718
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYF--STSRFAQFQGIDLHEVMNQLSVHLFDG 658
K+RK M+++ K++ GCSW E+ K + F S+ Q + ID+ ++++L++ + +
Sbjct: 719 VKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDV--LLSKLTMQMQNE 776
Query: 659 GY 660
Y
Sbjct: 777 DY 778
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 273/537 (50%), Gaps = 8/537 (1%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
+Y + CA + GK +H + +G+ ++ + L+ MY CG L + +FD
Sbjct: 96 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+ W L+S Y + G + +F +K GV + ++ VL A LG +K
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 215
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
++H V K + V LI Y K ++ A +F + PD+ +W+++I G G
Sbjct: 216 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 275
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+ +++F++M G+ T VL A A++ GR LH +K FS +N
Sbjct: 276 FSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSN 335
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
T+LD YSKC L + + F +M + +VSW ++IA ++ Y +AI L +M +G P
Sbjct: 336 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRP 395
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
++YT ++I++ + +++ G+ H ++K G SN+ + +AL++MYAKCG + +AR VF
Sbjct: 396 DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVF 455
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ K++VSWNTM+ GY+Q+ L EALE++ MQ+ + KP+D T VL AC + ++
Sbjct: 456 SKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALD 514
Query: 498 EGWHYFNSMIRDHGISPRMDHIA-SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+G ++R S H+A ++V ++A G A P + + + W +++
Sbjct: 515 KGREIHGHILRRGYFSDL--HVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTVMIA 571
Query: 557 GCKTH--KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
G H + + + +I +P+++S +L N + + + +E K M+ +
Sbjct: 572 GYGMHGFGNEAISTFNEMRIAGIEPDESSFSAIL-NACSHSGLLNEGWKFFNSMRNE 627
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 214/409 (52%), Gaps = 4/409 (0%)
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
++ +C+ G+ + +++ S+ + ++ + SVL CA +L+ G ++HS++ +
Sbjct: 68 INKFCEMGDLRNAIELLTKSKSYELGLNSY--CSVLQLCAEKKSLEDGKRVHSVIISNGI 125
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
D+ + L+ +Y C L ++F I + W+ L+ YA++G E++ LF K
Sbjct: 126 SVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKK 185
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M G++ + TF+ VL FA + + +++H ++K+GF S T V N+++ Y K
Sbjct: 186 MQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGG 245
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+E + FDE+ E DVVSWN++I G + + G +E+ ML G +L T ++L
Sbjct: 246 VESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVA 305
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
++I + G+ H VK F VV + L+DMY+KCG LN A +VF + +VSW
Sbjct: 306 CANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSW 365
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+++ Y + GL +A+ ++ MQ ++P+ T ++ AC +++G + +I+
Sbjct: 366 TSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK 425
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ G+ + ++++++A G A P++ + V W ++ G
Sbjct: 426 N-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG 472
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/672 (31%), Positives = 369/672 (54%), Gaps = 1/672 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +GF+ + ++ ++ KF ++A ++F+ + + + + ++ G+++ A
Sbjct: 70 IIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDA 129
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F M+C + Y + C D + G+EIHG + +G E N V ++++
Sbjct: 130 LCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSL 189
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + +A +F+ ++ +SW +L++ Y Q G L++ L +++G +
Sbjct: 190 YAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTL 249
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L A A + L++G IH F+ E V L+++Y KC +A VF ++
Sbjct: 250 VSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRS 309
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W+ +I G AQ G++ EA F+KM G +P+ VT VL A A++ + G +
Sbjct: 310 KTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFV 369
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L+ K+ S V N+++ YSKC+ ++ + F+ +++ +V +WNA+I G+ +
Sbjct: 370 HKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCV 428
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ L M +G + +T ++ +D K H V+ D+NV + +AL
Sbjct: 429 KEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTAL 488
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAKCG + ARK+FD + +++++WN M+ GY HG+G+E L++++ MQ+ +KPND
Sbjct: 489 VDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPND 548
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ V+SAC H G VEEG F SM D+ + P MDH +++V L GQ A+ FI+
Sbjct: 549 ITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQ 608
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
PI+P V +L CK HK++ LG AA+K+ DP++ H++L+N+YA +MWD+
Sbjct: 609 EMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDK 668
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
AKVR M++K L K GCSW EL+N++H F + + ++ + L + GY
Sbjct: 669 VAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGY 728
Query: 661 VPDPIYSSHFEE 672
VPDP EE
Sbjct: 729 VPDPDSIHDVEE 740
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 186/368 (50%), Gaps = 19/368 (5%)
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
QI + K + +I+L+ K A+RVF +++L + ++ GYA+
Sbjct: 65 QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNS 124
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-------GRQLHSLIIKMGFS 310
+A+ F++M M EV V+G +A + + G GR++H LII GF
Sbjct: 125 SLGDALCFFLRM-----MCDEVRL--VVGDYACLLQLCGENLDLKKGREIHGLIITNGFE 177
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S FV V+ Y+KC ++ + K F+ M D+VSW L+AG+ + H A++L+ M
Sbjct: 178 SNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQM 237
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
G P+ T +IL +D+ A+ G+ H + GF+S V + +AL+DMY KCG
Sbjct: 238 QEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSA 297
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
AR VF + SK +VSWNTM+ G AQ+G EA + M + P T +GVL AC
Sbjct: 298 RIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLAC 357
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFIKSSPIEPNKV 549
++G +E GW + + ++ + + + S++ +++ C+ A F + +E V
Sbjct: 358 ANLGDLERGW-FVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIF---NNLEKTNV 413
Query: 550 VWRCLLSG 557
W ++ G
Sbjct: 414 TWNAMILG 421
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 235/650 (36%), Positives = 358/650 (55%), Gaps = 24/650 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ S HP++ NH+L MY K + DAQK+FD MPERNV+SW+++I+G+SQ G A
Sbjct: 89 MLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNA 148
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV--SNCLI 118
L ++ M+ + P+ +T+ + AC+S GD G+++H + +S E +H+ N LI
Sbjct: 149 LEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKS--EFGAHIIAQNALI 206
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI-SE 177
+MY K ++ A VF R+ ISW S+++ + Q G + L F GV + +E
Sbjct: 207 SMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNE 266
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
F SV AC+ L + G Q+H + K L D F L ++YAKC L A VF
Sbjct: 267 FIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQ 326
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
I PDL AW+A+I G+A G A EAI F +M GL+P E+T +L A E G
Sbjct: 327 IGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQG 386
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLA 356
Q+H I KMG V NT+L Y+KC L +++ F+EM D+VSWNA++ +
Sbjct: 387 MQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMH 446
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
E LLK M H P+ T +N+L S++ +IE G Q HC +K G + ++ +
Sbjct: 447 HDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDISV 506
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ L+D+YAKCG L ARK+FD + + ++VSW+++++GYAQ G G EAL+++ M+ +
Sbjct: 507 TNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDV 566
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KPN TF+GVL+AC H+GLVEEGW + +M ++ GI P +H + +V L A G A
Sbjct: 567 KPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAE 626
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKT-HKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
FI +P+ VVW+ LL+ CK+ H+ L R K+ E + + VY
Sbjct: 627 AFIHQMAFDPDIVVWKTLLAACKSVHQ--ALARRTNLKVWKKQHEVITL-VKGKFVY--- 680
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLH 645
V++I +E ++ CS + ++ + HY RF + + +
Sbjct: 681 --------VKQIDRE---EEACCCSLSNIKFQWHYLKDVRFKALKDLKMR 719
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/482 (31%), Positives = 243/482 (50%), Gaps = 4/482 (0%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TY +SAC+ G++IH M +S + + N ++NMYGKCG L AQ VFDA
Sbjct: 65 TYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAM 124
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
ERN +SW S+++ Y Q G+ + L+ + +SGV +F+ S++ AC+ LG++ +G
Sbjct: 125 PERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+H+ V K LI++Y K + A VFS + DL +W ++I G++QLG
Sbjct: 185 QLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLG 244
Query: 258 KACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
EA+ F +M G+ +P+E F V A + + + GRQLH + IK G F
Sbjct: 245 YELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAG 304
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
++ D Y+KC LL + F ++ D+V+WNA+IAG EAI M +G
Sbjct: 305 CSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLI 364
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ T ++L + + G Q H I K G D +V + + L+ MYAKC L DA
Sbjct: 365 PDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFF 424
Query: 437 FDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
F+ + + +LVSWN +L H E + +M ++ +P+ T VL A
Sbjct: 425 FEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVS 484
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+E G ++ G++ + ++ L+A G + A + I S I P+ V W L+
Sbjct: 485 IEIGNQVHCYALKT-GLNCDISVTNGLIDLYAKCGSLKTARK-IFDSVINPDVVSWSSLI 542
Query: 556 SG 557
G
Sbjct: 543 LG 544
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 220/418 (52%), Gaps = 9/418 (2%)
Query: 149 LSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
+++ C+ +K F L +K+G ++ + A ++ AC+ L +L+ G +IH + K
Sbjct: 34 ITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHMLKSK 93
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
D + ++N+Y KC L A +VF + ++ +W+++I GY+Q G+ A++ +
Sbjct: 94 SHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYF 153
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
+M SG+MP + TF ++ A + + + GRQLH+ ++K F + N ++ Y+K
Sbjct: 154 QMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSN 213
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG-HCPNLYTYSNIL 386
++ ++L F M D++SW ++IAG + EA+ K+ML +G + PN + + ++
Sbjct: 214 VIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVF 273
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+ S + E+G+Q H +K G +V G +L DMYAKCG L+ AR VF + +LV
Sbjct: 274 SACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLV 333
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH---YF 503
+WN ++ G+A G +EA+ +S M+ + P++ T +L AC + +G Y
Sbjct: 334 AWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYI 393
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
N M G+ + +++ ++A + R A F + + V W +L+ C H
Sbjct: 394 NKM----GLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHH 447
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 229/670 (34%), Positives = 365/670 (54%), Gaps = 1/670 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG V N L+ M+ R+ DA+KLFD M E + IS +A+IS +S G+
Sbjct: 171 VIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKC 230
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M L P+ T +S CAS G IH RS L+ + V N L+NM
Sbjct: 231 FLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNM 290
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G LS A+F+F R+ ISW +++SSY Q LK + + +
Sbjct: 291 YSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTF 350
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S LGAC+ G L G +H++V + +L+ + V LI +Y KC ++ A +VF ++
Sbjct: 351 SSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT 410
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQ 299
D+ +++ LIGGYA L +A+ +F + S+G+ P+ +T + G+F + GR
Sbjct: 411 HDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRP 470
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH+ II+ GF S +VAN+++ Y+KC LE S F+ + ++VSWNA+IA + H
Sbjct: 471 LHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGH 530
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA++L DM G+ + + L+ + + ++E G Q H +K G DS+ + +A
Sbjct: 531 GEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNA 590
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
+DMY KCG++N+ ++ + + WNT++ GYA++G +EA E + M KP+
Sbjct: 591 AMDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPD 650
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ +LSAC H GLV++G Y+NSM G+SP + H +V L G+ A FI
Sbjct: 651 YVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFI 710
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ P+ PN ++WR LLS +THK+L +GR AA+K+L DP D SA+++LSN+YA W
Sbjct: 711 EEMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWV 770
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ K+R MK ++ K CSW +L+N++ F ++ ++++ + L + G
Sbjct: 771 DVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVG 830
Query: 660 YVPDPIYSSH 669
Y+ D + H
Sbjct: 831 YIADTSSALH 840
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 163/557 (29%), Positives = 278/557 (49%), Gaps = 7/557 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G NV LL +Y ++DA++LF EMPERNV+SW+AL+ S G E L
Sbjct: 73 AGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETLRA 132
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+R M + N + VS C S + G ++ + SGL+ V+N LI M+G
Sbjct: 133 YRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGN 192
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
G + A+ +FD E ++IS +++S Y G +F R G+ + S+
Sbjct: 193 LGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSL 252
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
+ CA + G IHSL + +L+ V L+N+Y+ KL A +F N+ DL
Sbjct: 253 MSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDL 312
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+ +I Y Q + +A+ ++F + +P+ +TFS LGA + I G+ +H++
Sbjct: 313 ISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAI 372
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
++++ V N+++ Y KC +E++ K F M HDVVS+N LI G+ +A
Sbjct: 373 VLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKA 432
Query: 364 IELLKDMLFEGHCPNLYTYSNI---LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+++ + G PN T NI S+D+ +G+ H I++ GF S+ + ++L
Sbjct: 433 MQVFSWIRSAGIKPNYITMINIHGSFTSSNDLH--NYGRPLHAYIIRTGFLSDEYVANSL 490
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MYAKCG L + +F+ +++KN+VSWN ++ AQ G G EAL+++ MQ K +
Sbjct: 491 ITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDR 550
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
LS+C + +EEG + + G+ + + + ++ G+ + +
Sbjct: 551 VCLAECLSSCASLASLEEGMQ-LHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVP 609
Query: 541 SSPIEPNKVVWRCLLSG 557
I P + W L+SG
Sbjct: 610 DQAIRPQQ-CWNTLISG 625
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 222/454 (48%), Gaps = 3/454 (0%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARS- 94
MP+R +W +SG + G A R M + + + V+AC RG
Sbjct: 1 MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 95 --GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
G IH +R+GL N ++ L+++YG G++S A+ +F ERN +SW +L+ +
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVAL 120
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
G L+ + R+ GV + + A+V+ C L N G+Q+ S V L+
Sbjct: 121 SSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQV 180
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
VA LI ++ ++ A ++F ++ D + +A+I Y+ G + +F M
Sbjct: 181 SVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHH 240
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
GL P T ++ A G +HSL ++ S V N +++ YS L ++
Sbjct: 241 GLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
F M D++SWN +I+ ++ +C+ +A++ L + PN T+S+ L S
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSP 360
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
A+ GK H +++ N+++G++L+ MY KC + DA KVF + + ++VS+N ++
Sbjct: 361 GALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLI 420
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
GYA G +A++++S ++ IKPN T I +
Sbjct: 421 GGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINI 454
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 182/366 (49%), Gaps = 7/366 (1%)
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN---LKV 195
+R +W + +S +CG V ++ R+ GV +S F+ AS++ AC G +
Sbjct: 3 DRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIAC 62
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G IH+L + L + ++ L++LY + A R+F + ++ +W+AL+ +
Sbjct: 63 GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSS 122
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G E + + +M G+ + F+ V+ ++ + G Q+ S +I G + V
Sbjct: 123 NGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSV 182
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA--GHLASCHYGEAIELLKDMLFE 373
AN+++ + ++++ K FD M+EHD +S NA+I+ H C + + DM
Sbjct: 183 ANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGIC--SKCFLVFSDMRHH 240
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G P+ T +++++ + G H ++ DS+V + +ALV+MY+ G+L+DA
Sbjct: 241 GLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+F ++S ++L+SWNTM+ Y Q+ +AL+ + PN TF L AC
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSP 360
Query: 494 GLVEEG 499
G + +G
Sbjct: 361 GALIDG 366
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/677 (31%), Positives = 373/677 (55%), Gaps = 16/677 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGF-----SQIG 55
++ SG + N+LL MY K ++ A+++FD PER++++W+A++ + S G
Sbjct: 103 IVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDG 162
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
+ L+ FRL+ + T + C + G + + +HG + GLE + VS
Sbjct: 163 NAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSG 222
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
L+N+Y KCG + A+ +FD ER+ + W +L Y Q G ++F +SG+
Sbjct: 223 ALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRP 282
Query: 176 SEFSCASVLGACAVLG--NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
EFS +L C G +L++G Q+H + K L+ D VA L+N+Y+K A
Sbjct: 283 DEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFARE 342
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
VF++++ DL +W+++I AQ E+++LF+ + GL P T + + A +
Sbjct: 343 VFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASI--TLATAAK 400
Query: 294 TIG-------GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
G G+Q+H+ IK GF S V + +LD Y KC + + F+ + D V+
Sbjct: 401 ACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVA 460
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
W ++I+G + + + +A+ + M P+ YT++ ++ SS + A+E G+Q H ++
Sbjct: 461 WTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVI 520
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
K S+ +G++LVDMYAKCG + DA ++F ++ +N+ WN MLVG AQHG EA+
Sbjct: 521 KLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVN 580
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
++ M+ + I+P+ +FIG+LSAC H GL E + Y +SM D+GI P ++H + +V
Sbjct: 581 LFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDAL 640
Query: 527 ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI 586
G + A + I++ P + + + R LL C+ D+ G+ A ++ + +P D++A++
Sbjct: 641 GRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYV 700
Query: 587 MLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHE 646
+LSN+YA AN WD+ RK+MK K++KKD G SW +++N +H F + Q +++
Sbjct: 701 LLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYD 760
Query: 647 VMNQLSVHLFDGGYVPD 663
+ ++ + + GYVPD
Sbjct: 761 KVEEMMKTIREDGYVPD 777
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 151/480 (31%), Positives = 257/480 (53%), Gaps = 16/480 (3%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
GK H R+ SG + +SN L+ MY KCG LSSA+ VFD + ER+ ++W ++L +Y
Sbjct: 96 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 155
Query: 155 C-----GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
G GL +F L R S + + + A VL C G L +H K LE
Sbjct: 156 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 215
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
+D FV+ L+N+Y+KC ++ A +F ++ D+ W+ ++ GY QLG EA LF +
Sbjct: 216 WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF 275
Query: 270 FSSGLMPSEVTFSYVLGA--FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
SGL P E + +L +A + G+Q+H + +K G S VAN++++ YSK
Sbjct: 276 HRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMG 335
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
+ + F++M D++SWN++I+ S E++ L D+L EG P+ +T ++I
Sbjct: 336 CAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITL 395
Query: 388 ISSD-----IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
++ + ++ GKQ H +K GFDS++ + S ++DMY KCG + +A VF+++S+
Sbjct: 396 ATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISA 455
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
+ V+W +M+ G +G +AL IY M+++++ P++ TF ++ A + +E+G
Sbjct: 456 PDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQL 515
Query: 503 FNSMIRDHGIS-PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++I+ +S P + S+V ++A G AY K + N +W +L G H
Sbjct: 516 HANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQH 572
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 186/386 (48%), Gaps = 28/386 (7%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
NL +G H+ + D F++ L+ +Y+KC L A +VF DL W+A++G
Sbjct: 92 NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILG 151
Query: 252 GYA-----QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
YA G A E + LF + +S + +T + VL + +H IK
Sbjct: 152 AYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIK 211
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
+G FV+ +++ YSKC + ++ FD M E DVV WN ++ G++ EA +L
Sbjct: 212 IGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQL 271
Query: 367 LKDMLFEGHCPNLYTYSNILN--ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+ G P+ ++ ILN + + +E GKQ H VK G DS+V + ++LV+MY
Sbjct: 272 FSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMY 331
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+K G AR+VF+ + +L+SWN+M+ AQ L E++ ++ + +KP+ T
Sbjct: 332 SKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLA 391
Query: 485 GVL-----SACVHIGLVEEGWHYFNSMIRDHGISPRMD---HIAS-VVHLFACRGQTRRA 535
+ AC + L+++G I H I D H+ S ++ ++ G A
Sbjct: 392 SITLATAAKACGCLVLLDQG-----KQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNA 446
Query: 536 ---YEFIKSSPIEPNKVVWRCLLSGC 558
+ +I + P+ V W ++SGC
Sbjct: 447 GIVFNYISA----PDDVAWTSMISGC 468
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/638 (35%), Positives = 352/638 (55%), Gaps = 9/638 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ---IGMP 57
+I +G + N L+ Y K ++ A +F+ + ++V+SW++LI+G+SQ I
Sbjct: 40 IIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSS 99
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
+ FR M + PN YT G A +S + G++ H + + + +V L
Sbjct: 100 YTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSL 159
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAI 175
+ MY K GL+ VF ERN+ +W +++S Y G +K+F L K +
Sbjct: 160 VGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD 219
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM--GLINLYAKCEKLDLASR 233
S++ +VL + A + +G QIH + K L FVA+ L+ +Y+KCE L+ A +
Sbjct: 220 SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLL--GFVALSNALVTMYSKCESLNEACK 277
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+F + + WSA++ GY+Q G++ EA+ LF +MFS+G+ PSE T VL A +D+
Sbjct: 278 MFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICY 337
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+QLHS ++K+GF F ++D Y+K L ++ K FD + E DV W +LI+G
Sbjct: 338 LEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISG 397
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
++ + EA+ L + M G PN T +++L S + +E GKQ H +K GF
Sbjct: 398 YVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE 457
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V IGSAL MY+KCG L D VF +K++VSWN M+ G + +G G EALE++ M
Sbjct: 458 VPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLA 517
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
++P+D TF+ ++SAC H G VE GW YFN M G+ P++DH A +V L + GQ +
Sbjct: 518 EGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLK 577
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A EFI+S+ I+ +WR LLS CK H LG YA EK+++ ++S ++ LS +Y
Sbjct: 578 EAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYT 637
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+ +V K M+ + K+ GCSW EL+N+ H F
Sbjct: 638 ALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVF 675
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 256/492 (52%), Gaps = 9/492 (1%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L P+ T + ++ + + + +G+ +HG++ R+G +N L+N Y KCG L+ A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 132 FVFDASLERNSISWVSLLSSYCQCG---EHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+F+A + ++ +SW SL++ Y Q G +++F R + + ++ A + A +
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L + VG Q H+LV K + D +V L+ +Y K ++ +VF+ + + WS
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 249 LIGGYAQLGKACEAI---DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
++ GYA G+ EAI +LF++ G S+ F+ VL + A GRQ+H + I
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQIHCITI 248
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K G F ++N ++ YSKCE L E+ K FD + + ++W+A++ G+ + EA++
Sbjct: 249 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 308
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L M G P+ YT +LN SDI +E GKQ H ++K GF+ ++ +ALVDMYA
Sbjct: 309 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYA 368
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
K G L DARK FD L +++ W +++ GY Q+ EAL +Y M+ I PND T
Sbjct: 369 KAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMAS 428
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
VL AC + +E G I+ HG + +++ +++ G + +P
Sbjct: 429 VLKACSSLATLELGKQVHGHTIK-HGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP-N 486
Query: 546 PNKVVWRCLLSG 557
+ V W ++SG
Sbjct: 487 KDVVSWNAMISG 498
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 124/234 (52%), Gaps = 8/234 (3%)
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
F + L P T L + + + GR +H II+ G S+ AN +++FY+KC L
Sbjct: 6 FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA---IELLKDMLFEGHCPNLYTYSNIL 386
++ F+ + DVVSWN+LI G+ + + ++L ++M + PN YT + I
Sbjct: 66 AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
S + + G+Q H +VK ++ + ++LV MY K G + D KVF ++ +N
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY 185
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI-----GVLSACVHIGL 495
+W+TM+ GYA G EA++++++ K + +D+ ++ L+A +++GL
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGL 239
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/660 (32%), Positives = 375/660 (56%), Gaps = 7/660 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N I NHL+ MY + + + A+ +FD M +RN +SW+A+I+ +Q A+ F M+
Sbjct: 79 NTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSML 138
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
P+ + AV ACA GD G+++H + +S + V N L+ MY K G +
Sbjct: 139 RLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVG 198
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA-ISEFSCASVLGAC 187
+F+ +++ SW S+++ Q G + L IF G+ +EF SV AC
Sbjct: 199 DGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRAC 258
Query: 188 AVLGN-LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
+V+ N L+ G QIH L K L+ + + L ++YA+C KLD A +VF I+ PDL +W
Sbjct: 259 SVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSW 318
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
++LI ++ G EA+ LF +M S L P +T +L A GR +HS ++K
Sbjct: 319 NSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVK 378
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
+G V N+++ Y++C ++ F E ++ DVV+WN+++ + H + +L
Sbjct: 379 LGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKL 438
Query: 367 LKDMLFEGHCPNL--YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+ L P+L + +N+L+ S+++ E KQ H K G S+ ++ +AL+D Y
Sbjct: 439 FR--LLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTY 496
Query: 425 AKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
AKCG L+DA K+F+ + + +++ SW++++VGYAQ G +EAL++++ M+ +KPN TF
Sbjct: 497 AKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTF 556
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+GVL AC +GLV+EG +Y++ M ++GI P +H + V+ L A G+ A +F+ P
Sbjct: 557 VGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMP 616
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
EP+ ++W LL+ +TH D+ +G+ AAE +L+ DP ++A+++L N+YA + W+E A+
Sbjct: 617 FEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFAR 676
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++K M+ ++K G SW +L+ ++ F + + +++ +++ + + GY+P+
Sbjct: 677 LKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEMYTMLDLIGFEMVKAGYIPE 736
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 201/393 (51%), Gaps = 2/393 (0%)
Query: 107 LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
L N+ +SN LI MYG+C SA+ VFD L+RN +SW ++++++ Q + +F
Sbjct: 76 LARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFS 135
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
+ G A EF+ S + ACA LG+L +G Q+H+ K V L+ +Y+K
Sbjct: 136 SMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSG 195
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVL 285
+ +F I+ DL +W ++I G AQ G+ +A+ +F +M + G+ P+E F V
Sbjct: 196 SVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVF 255
Query: 286 GAFADVKETIG-GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDV 344
A + V ++ G Q+H L +K ++ ++ D Y++C L+ ++K F ++ D+
Sbjct: 256 RACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDL 315
Query: 345 VSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCC 404
VSWN+LI A EA+ L +M + P+ T +L A+ G+ H
Sbjct: 316 VSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSY 375
Query: 405 IVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREA 464
+VK G +V++ ++L+ MY +C A VF + +++V+WN++L QH +
Sbjct: 376 LVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDV 435
Query: 465 LEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+++ ++ + + + VLSA +G E
Sbjct: 436 FKLFRLLHSSMPSLDRISLNNVLSASAELGYFE 468
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 3/255 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V+ N L+ MY + A +F E +R+V++W+++++ Q E
Sbjct: 376 LVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDV 435
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
FRL+ + + + +SA A G K++H ++ GL ++ +SN LI+
Sbjct: 436 FKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDT 495
Query: 121 YGKCGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG L A +F+ R+ SW SL+ Y Q G L +F R GV + +
Sbjct: 496 YAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVT 555
Query: 180 CASVLGACAVLGNLKVGMQIHSLV-FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
VL AC+ +G + G +S++ + + K +I+L A+ +L A++ +
Sbjct: 556 FVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQM 615
Query: 239 QL-PDLTAWSALIGG 252
PD+ W+ L+
Sbjct: 616 PFEPDIIMWNTLLAA 630
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/654 (32%), Positives = 368/654 (56%), Gaps = 1/654 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N ++ L YV+ + +A LF+ M + + W+ +I GF G+ A++++ M
Sbjct: 59 NSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRME 118
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ + +TY + AC D G+ +HG++ +SGL+L+ ++ N LI MY K G +
Sbjct: 119 FGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIE 178
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
SA+ VF R+ +SW S++S Y G+ L F + SG+ + FS +LGAC+
Sbjct: 179 SAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACS 238
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ G L+ G +IH + + LE D V L+++YAKC ++D A R+F I + AW+A
Sbjct: 239 LEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNA 298
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+IGGY+ ++ E+ KM G L P +T +L A ++ + G+ +H I+
Sbjct: 299 MIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRN 358
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
GF + ++D Y +C L+ + F +M+E +++SWNA+IA + + +A+ L
Sbjct: 359 GFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLF 418
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+D+ + P+ T ++IL +++ ++ +Q H + K DSN + +++V MY KC
Sbjct: 419 QDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKC 478
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G L AR++FD ++ K+++SWNT+++ YA HG GR ++E++S M+E +PN +TF+ +L
Sbjct: 479 GNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLL 538
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
+C GLV EGW YFNSM RD+ I+P ++H ++ L G A FI+ P+ P
Sbjct: 539 LSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPT 598
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
+W LL+ + D+ L AAE ILS + ++T +++LSN+YAEA W++ +++
Sbjct: 599 ARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFH 658
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
MK++ L+K GCS +L +K F + + +++V++ +S + + YV
Sbjct: 659 MKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYV 712
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 233/465 (50%), Gaps = 9/465 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG ++ N L++MY K I A+ +F EMP R+++SW+++ISG+ +G +
Sbjct: 152 VIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRS 211
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR M ++ + ++ +G + AC+ G R+GKEIH +M RS LEL+ V L++M
Sbjct: 212 LSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDM 271
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF-S 179
Y KCG + A+ +FD +++ ++W +++ Y + ++ G ++ +
Sbjct: 272 YAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWIT 331
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++L CA L + +G +H + + L+++Y +C KL A +F +
Sbjct: 332 MINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMN 391
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+L +W+A+I Y + G+ +A+ LF + + L P T + +L A+A++ Q
Sbjct: 392 ERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQ 451
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H + K+ S TFV+N+++ Y KC L + + FD M DV+SWN +I +
Sbjct: 452 IHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGF 511
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG-- 417
+IEL +M +G PN T+ ++L S + G + + + D N+ G
Sbjct: 512 GRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKR---DYNINPGIE 568
Query: 418 --SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
++D+ + G L+ A+ + + + W ++L G
Sbjct: 569 HYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKG 613
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 193/394 (48%), Gaps = 32/394 (8%)
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK--------------------------- 170
+ERNS+S LSSY + G + L +F R+
Sbjct: 56 VERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYH 115
Query: 171 ----SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
GV F+ V+ AC L +L G ++H V K L+ D ++ LI +YAK
Sbjct: 116 RMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIG 175
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
++ A VF + + DL +W+++I GY +G ++ F +M +SG+ + +LG
Sbjct: 176 CIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILG 235
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
A + G+++H +++ V +++D Y+KC ++ + + FD++ + +V+
Sbjct: 236 ACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVA 295
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCI 405
WNA+I G+ + E+ ++ M G P+ T N+L + + AI GK H
Sbjct: 296 WNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFA 355
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
++ GF ++V+ +ALVDMY +CG+L A +F ++ +NL+SWN M+ Y ++G R+A+
Sbjct: 356 IRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAM 415
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
++ + +KP+ T +L A + + E
Sbjct: 416 TLFQDLCNKTLKPDATTIASILPAYAELASLREA 449
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 71/147 (48%), Gaps = 2/147 (1%)
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
+ N V + + Y + G + +A +F+++ + WN M+ G+ +GL +A++ Y
Sbjct: 57 ERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHR 116
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M+ ++ ++ T+ V+ AC + + EG +I+ G+ + S++ ++A G
Sbjct: 117 MEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKS-GLDLDIYIGNSLIIMYAKIG 175
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSG 557
A + P+ + V W ++SG
Sbjct: 176 CIESAEMVFREMPVR-DLVSWNSMISG 201
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/662 (30%), Positives = 366/662 (55%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG N+ N L+ ++ + +A++ FD + + V++W+A+I+G++Q+G + A
Sbjct: 87 IIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEA 146
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
FR MV +EP+ T++ + AC+S + GKE H ++ + G + + L++M
Sbjct: 147 FALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSM 206
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+ VFD +R+ ++ ++ Y + G+ ++F ++ G + S
Sbjct: 207 YVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISF 266
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L C+ L G +H+ L D VA LI +Y C ++ A RVF +++
Sbjct: 267 LSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKV 326
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+ +I GYA+ +A LF M G+ P +T+ +++ A A + R++
Sbjct: 327 RDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREI 386
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS +++ GF + V ++ Y+KC ++++ + FD M DVVSW+A+I ++ +
Sbjct: 387 HSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCG 446
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA E M P++ TY N+LN + A++ G + + +K S++ +G+AL
Sbjct: 447 EEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNAL 506
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
++M K G + AR +F+++ +++V+WN M+ GY+ HG REAL+++ M + + +PN
Sbjct: 507 INMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNS 566
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+GVLSAC G VEEG +F+ ++ GI P M+ +V L G+ A I
Sbjct: 567 VTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLIN 626
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
P++PN +W LL+ C+ + +L + AAE+ L ++P D + ++ LS++YA A MW+
Sbjct: 627 RMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWEN 686
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
AKVRK+M+ + ++K+ GC+W E++ K+H F + Q +++ + +L + GY
Sbjct: 687 VAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGY 746
Query: 661 VP 662
+P
Sbjct: 747 IP 748
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 254/489 (51%), Gaps = 8/489 (1%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TYV C DA GK++ + +SG +LN + N LI ++ CG + A+ FD+
Sbjct: 63 TYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSV 122
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+ ++W ++++ Y Q G +F + S + VL AC+ LK+G
Sbjct: 123 ENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGK 182
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
+ H+ V K D + L+++Y K +D A +VF + D++ ++ +IGGYA+ G
Sbjct: 183 EFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSG 242
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+A LF +M G P+ ++F +L + + G+ +H+ + G VA
Sbjct: 243 DGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVAT 302
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
++ Y C +E + + FD+M DVVSW +I G+ + + +A L M EG P
Sbjct: 303 ALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQP 362
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ TY +I+N + + ++ H +V+ GF +++++ +ALV MYAKCG + DAR+VF
Sbjct: 363 DRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVF 422
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D +S +++VSW+ M+ Y ++G G EA E + +M+ N ++P+ T+I +L+AC H+G ++
Sbjct: 423 DAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALD 482
Query: 498 EGWHYFNSMIRDHGISPRMDHIA---SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
G + I+ +S HI +++++ G RA +I + ++ + V W +
Sbjct: 483 LGMEIYTQAIKADLVS----HIPVGNALINMNVKHGSIERA-RYIFENMVQRDVVTWNVM 537
Query: 555 LSGCKTHKD 563
+ G H +
Sbjct: 538 IGGYSLHGN 546
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/665 (33%), Positives = 354/665 (53%), Gaps = 5/665 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G ++ N L+ MY K I+DA+ +FD M ER++ SW+ +I G +Q G + A
Sbjct: 158 VNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAF 217
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACA--SRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ F M PN TY+ ++A A S G KE+H ++G + V N LI+
Sbjct: 218 SLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIH 277
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG + A+ VFD +R+ ISW +++ Q G IFL ++ G +
Sbjct: 278 MYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTT 337
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L G + ++H + L D V +++Y +C +D A +F +
Sbjct: 338 YLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLA 397
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ ++T W+A+IGG AQ EA+ LF++M G P TF +L A + ++
Sbjct: 398 VRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKE 457
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+HS I G V N ++ Y+KC + + FD+M E +V +W +I+G LA
Sbjct: 458 VHSYAIDAGLVDLR-VGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISG-LAQHG 515
Query: 360 YG-EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
G EA L ML EG P+ TY +IL+ + A+EW K+ H V G S++ +G+
Sbjct: 516 CGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGN 575
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALV MYAKCG ++DAR+VFD + +++ SW M+ G AQHG G +AL+++ M+ KP
Sbjct: 576 ALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKP 635
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N +F+ VLSAC H GLV+EG F S+ +D+GI P M+H +V L GQ A F
Sbjct: 636 NGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHF 695
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I + PIEP W LL C T+ +L + +AA++ L P+ S +++LSN+YA W
Sbjct: 696 ILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNW 755
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
++ VR +M+ + ++K+ G SW E+ N++H F + + +++ + L L
Sbjct: 756 EQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAE 815
Query: 659 GYVPD 663
GYVPD
Sbjct: 816 GYVPD 820
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 183/567 (32%), Positives = 288/567 (50%), Gaps = 13/567 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF +V L+ MYVK I+DAQ +FD+M ERNVISW+ +I G + G + A
Sbjct: 56 IIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEA 115
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M PN YTYV ++A AS G KE+H +GL L+ V N L++M
Sbjct: 116 FHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHM 175
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+ VFD +ER+ SW ++ Q G +FL + G + +
Sbjct: 176 YAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTY 235
Query: 181 ASVLGACAV--LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S+L A A+ G L+ ++H K D V LI++YAKC +D A VF +
Sbjct: 236 LSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGM 295
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +W+A+IGG AQ G EA +F+KM G +P T+ +L +
Sbjct: 296 CDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVK 355
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H +++G S V + + Y +C ++++ FD++ +V +WNA+I G
Sbjct: 356 EVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQK 415
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA+ L M EG P+ T+ NIL+ + A+EW K+ H + G ++ +G+
Sbjct: 416 CGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGN 474
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALV MYAKCG A++VFD + +N+ +W M+ G AQHG G EA ++ M I P
Sbjct: 475 ALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVP 534
Query: 479 NDNTFIGVLSACVHIGLVEEGW-HYFNSMIRDHGISPRMDHIASVVHLFACRG---QTRR 534
+ T++ +LSAC G +E W +S + G+ + ++VH++A G RR
Sbjct: 535 DATTYVSILSACASTGALE--WVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARR 592
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++ + +E + W ++ G H
Sbjct: 593 VFDDM----LERDVYSWTVMIGGLAQH 615
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 267/519 (51%), Gaps = 9/519 (1%)
Query: 47 LISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG 106
+I G+++ G E A+ + M +PN TY+ + AC S + GK+IH + +SG
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 107 LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
+ + V L+NMY KCG + AQ +FD +ERN ISW ++ G FL
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
++ G + ++ S+L A A G L+ ++HS L D V L+++YAK
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
+D A VF + D+ +W+ +IGG AQ G+ EA LF++M G +P+ T+ +L
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 287 AFADVKETIGG----RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
A A + G +++H K GF S V N ++ Y+KC ++++ FD M +
Sbjct: 241 ASAIT--STGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR 298
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
DV+SWNA+I G + EA + M EG P+ TY ++LN A EW K+ H
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVH 358
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
V+ G S++ +GSA V MY +CG ++DA+ +FD L+ +N+ +WN M+ G AQ GR
Sbjct: 359 KHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGR 418
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
EAL ++ M+ P+ TF+ +LSA V +E + I + R+ + ++
Sbjct: 419 EALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGN--AL 476
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
VH++A G T A + + +E N W ++SG H
Sbjct: 477 VHMYAKCGNTMYAKQ-VFDDMVERNVTTWTVMISGLAQH 514
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/659 (33%), Positives = 368/659 (55%), Gaps = 12/659 (1%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY+K+ + D +K+F+ MP+RNV++W++L++G+ Q G + F M + PN
Sbjct: 145 LVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPN 204
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
T+ +S AS+G G+ +H + + G V N L+NMY KCGL+ A+ VF
Sbjct: 205 SVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFC 264
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
R+ +SW +L++ G + L++F SR S +++ + A+V+ CA + L +
Sbjct: 265 GMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGL 324
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF---SNIQLPDLTAWSALIGG 252
Q+HS V K V L++ Y+K +L A +F S Q ++ +W+A+I G
Sbjct: 325 ARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQ--NVVSWTAMING 382
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA-FADVKETIGGRQLHSLIIKMGFSS 311
Q G A LF +M G+ P++ T+S +L A A + Q+H+ +IK +
Sbjct: 383 CIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPP-----QIHAQVIKTNYEC 437
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
+ V +L YSK EE+L F +D+ DVVSW+A++ + + A + M
Sbjct: 438 TSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMT 497
Query: 372 FEGHCPNLYTYSNILNI-SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
G PN +T S++++ +S ++ G+Q H +K + + SALV MYA+ G +
Sbjct: 498 MHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSI 557
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
A+ +F+ + ++LVSWN+ML GYAQHG ++AL+++ M+ I+ + TF+ V+ C
Sbjct: 558 ESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGC 617
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
H GLVEEG YF+SM RD+GI+P M+H A +V L++ G+ A I+ +V
Sbjct: 618 AHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMV 677
Query: 551 WRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
WR LL CK HK++ LG+ AAEK+LS +P D++ +++LSN+Y+ A W E +VRK+M
Sbjct: 678 WRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDT 737
Query: 611 KSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
K +KK+ GCSW +++NK+H F S + ++ + ++ L GY PD ++ H
Sbjct: 738 KKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALH 796
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 163/545 (29%), Positives = 268/545 (49%), Gaps = 15/545 (2%)
Query: 24 SRINDA---QKLFDEMPERNVISWSALISGFSQIGMPEVALNYF-RLMVCCVLEPNYYTY 79
+ +NDA ++ FDE+P RN + + + ++ G AL++F + C
Sbjct: 49 TNLNDATGARQAFDEIPHRNTLDHA--LFDHARRGSVHQALDHFLDVHRCHGGRVGGGAL 106
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLEL-NSHVSNCLINMYGKCGLLSSAQFVFDASL 138
VG + C S D GK++HG R G + + V L++MY K + + VF+A
Sbjct: 107 VGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMP 166
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
+RN ++W SLL+ Y Q G +++F R GV + + ASVL A G + +G +
Sbjct: 167 KRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRR 226
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H+ K FV L+N+YAKC ++ A VF ++ D+ +W+ L+ G G
Sbjct: 227 VHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGH 286
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
EA+ LF SS M ++ T++ V+ A++K+ RQLHS ++K GF S+ V
Sbjct: 287 DLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTA 346
Query: 319 VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
++D YSK L +L F M +VVSW A+I G + + A L M +G P
Sbjct: 347 LMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAP 406
Query: 378 NLYTYSNILNIS-SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
N +TYS IL S + +P Q H ++K ++ ++G+AL+ Y+K +A +
Sbjct: 407 NDFTYSTILTASVASLP-----PQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSI 461
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
F + K++VSW+ ML YAQ G A I+ M + +KPN+ T V+ AC
Sbjct: 462 FKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAG 521
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+ F+++ H + +++V ++A +G A + I + + V W +LS
Sbjct: 522 VDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESA-QCIFERQTDRDLVSWNSMLS 580
Query: 557 GCKTH 561
G H
Sbjct: 581 GYAQH 585
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 225/465 (48%), Gaps = 11/465 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
V N L+ MY K + +A+ +F M R+++SW+ L++G G AL F
Sbjct: 239 TVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSR 298
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ TY + CA+ +++H + + G +V L++ Y K G L
Sbjct: 299 SSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLG 358
Query: 129 SAQFVF-DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+A +F S +N +SW ++++ Q G+ +F R+ GVA ++F+ +++L A
Sbjct: 359 NALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTAS 418
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ QIH+ V K E V L+ Y+K + A +F I D+ +WS
Sbjct: 419 VA----SLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWS 474
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQLHSLIIK 306
A++ YAQ G + A ++F+KM GL P+E T S V+ A A + GRQ H++ IK
Sbjct: 475 AMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIK 534
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
V++ ++ Y++ +E + F+ + D+VSWN++++G+ + +A+++
Sbjct: 535 HRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDV 594
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYA 425
+ M EG + T+ +++ + +E G++ + + G + + +VD+Y+
Sbjct: 595 FRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYS 654
Query: 426 KCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALE 466
+ G+L++A + + +S + W T+L H LG+ A E
Sbjct: 655 RAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAE 699
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 15/310 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + + I LL Y K +A +F + +++V+SWSA+++ ++Q G + A
Sbjct: 430 VIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGA 489
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACAS-RGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
N F M L+PN +T + ACAS G++ H + VS+ L++
Sbjct: 490 TNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVS 549
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY + G + SAQ +F+ +R+ +SW S+LS Y Q G L +F G+ + +
Sbjct: 550 MYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVT 609
Query: 180 CASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
SV+ CA G ++ G + + + + + M ++LY++ KLD A +
Sbjct: 610 FLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACM--VDLYSRAGKLDEAMSLIE 667
Query: 237 NIQLP-DLTAWSALIGG-----YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
+ P W L+G +LGK L ++ F S + V S + A
Sbjct: 668 GMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSA---TYVLLSNIYSAAGK 724
Query: 291 VKETIGGRQL 300
KE R+L
Sbjct: 725 WKEKDEVRKL 734
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/617 (33%), Positives = 345/617 (55%)
Query: 47 LISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG 106
++ G+++ + AL++F M + P Y + + C D + GKEIHG + SG
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 107 LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
N ++NMY KC ++ A +FD ER+ + W +++S Y Q G L + L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
+ G + S+L A A L++GM +H V + E V+ L+++Y+KC
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
+ +A +F + + +W+++I GY Q G A A+ +F KM G+ P+ VT L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
A AD+ + G+ +H L+ ++ S V N+++ YSKC+ ++ + F + +VS
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
WNA+I G+ + EA+ +M P+ +T +++ +++ K H ++
Sbjct: 301 WNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVI 360
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
+ D NV + +ALVDMYAKCG ++ ARK+FD ++++++++WN M+ GY HGLG+ ++E
Sbjct: 361 RRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVE 420
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
++ M++ IKPND TF+ LSAC H GLVEEG +F SM +D+GI P MDH ++V L
Sbjct: 421 LFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLL 480
Query: 527 ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI 586
G+ +A++FI+ PI+P V+ +L CK HK++ LG AA +I +P+D H+
Sbjct: 481 GRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHV 540
Query: 587 MLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHE 646
+L+N+YA A+MW + AKVR IM++ L+K GCS E+ N++H F + + Q ++
Sbjct: 541 LLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYS 600
Query: 647 VMNQLSVHLFDGGYVPD 663
+ L + GYVPD
Sbjct: 601 YLETLVDEIRAAGYVPD 617
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 158/489 (32%), Positives = 250/489 (51%), Gaps = 12/489 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ITSGF N+ ++ MY K +INDA +FD MPER+++ W+ +ISG++Q G +VA
Sbjct: 56 VITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVA 115
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M P+ T V + A A R G +HG + R+G E +VS L++M
Sbjct: 116 LMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDM 175
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG +S A+ +FD R +SW S++ Y Q G+ + IF GV + +
Sbjct: 176 YSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTV 235
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
L ACA LG+L+ G +H LV + L+ D V LI++Y+KC+++D+A+ +F N++
Sbjct: 236 MGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRN 295
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
L +W+A+I GYAQ G EA++ F +M S + P T V+ A A++ + +
Sbjct: 296 KTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWI 355
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L+I+ FV ++D Y+KC + + K FD M+ V++WNA+I G+
Sbjct: 356 HGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLG 415
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
++EL K+M PN T+ L+ S +E G + K G + + A
Sbjct: 416 KTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGA 475
Query: 420 LVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH---GLG-REALEIYSMMQEN 474
+VD+ + GRLN A + K + + ML H LG + A EI+
Sbjct: 476 MVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIF------ 529
Query: 475 KIKPNDNTF 483
K+ P+D +
Sbjct: 530 KLNPDDGGY 538
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/659 (32%), Positives = 355/659 (53%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V + L+ +Y + ++DAQ LFD +P+++ + W+ +++G+ + G A+ F
Sbjct: 88 GLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIF 147
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M ++PN T+ +S CAS G ++HG GLEL+S V+N L+ MY KC
Sbjct: 148 LEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKC 207
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L +A+ +FD + + +SW ++S Y Q G +F +G+ + AS L
Sbjct: 208 QCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFL 267
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
L +LK +IH + + A+ D F+ LI++Y KC +++A + D
Sbjct: 268 PCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTV 327
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+ +I GY GK EA++ F + + P+ VTFS + AFA + G++LH I
Sbjct: 328 VCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSI 387
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK V + +LD Y+KC L+ + + F+ + E D + WN++I + GEAI
Sbjct: 388 IKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAI 447
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
L + M EG + + S L+ +++PA+ +GK+ H ++K S++ S+L+DMY
Sbjct: 448 NLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMY 507
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG LN +R+VFD + KN VSWN+++ Y HG +E L ++ M N I+P+ TF+
Sbjct: 508 AKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFL 567
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
G++SAC H G V+EG Y++ M ++GI RM+H A V +F G+ A+E I S P
Sbjct: 568 GIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPF 627
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
P+ VW LL C H ++ L A++ + DP ++ +++L+NV A A W + KV
Sbjct: 628 PPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKV 687
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
R IMKE+ ++K G SW E+ N H F + + ++ V++ L + L GYVP
Sbjct: 688 RSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQ 746
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 286/551 (51%), Gaps = 12/551 (2%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MYV+ + DA+ LF + +W+ +I GF+ +G AL ++ M+ + P+ YT
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
+ V AC + GK +H + GL+ + V + LI +Y + G LS AQ++FD
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
+++S+ W +L+ Y + G+ + +KIFL R S + + + A VL CA L +G Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H + C LE D VA L+ +Y+KC+ L A ++F + DL +W+ +I GY Q G
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
EA LF M S+G+ P +TF+ L ++ +++H II+ F+ +
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
++D Y KC +E + K + D V +I+G++ + EA+E + ++ E P
Sbjct: 301 LIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T+S+I + + A+ GK+ H I+K D +GSA++DMYAKCGRL+ A +VF+
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
++ K+ + WN+M+ +Q+G EA+ ++ M + + + G LSAC ++ +
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHY 480
Query: 499 GWHYFNSMIRDHGISPRMDHIA--SVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRC 553
G MI+ R D A S++ ++A G +RR ++ ++ E N+V W
Sbjct: 481 GKEIHGLMIKG---PLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ----EKNEVSWNS 533
Query: 554 LLSGCKTHKDL 564
++S H DL
Sbjct: 534 IISAYGNHGDL 544
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 7/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI ++ + L+ MY K +N ++++FD M E+N +SW+++IS + G +
Sbjct: 488 MIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKEC 547
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F M+ ++P++ T++G +SAC G G + M G+ C+ +
Sbjct: 548 LALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVAD 607
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHG 161
M+G+ G L A + + ++ W +LL + C H+HG
Sbjct: 608 MFGRAGRLHEAFETINSMPFPPDAGVWGTLLGA-C----HIHG 645
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/640 (33%), Positives = 349/640 (54%), Gaps = 1/640 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM-VCCVL 72
N L VK + +A+++FD+M +++ ISW+ LISG+ AL F+ M V L
Sbjct: 53 NKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGL 112
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+ + A AC D G+ +HG ++GL + V + L++MY K G + +
Sbjct: 113 RIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRR 172
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VF RN +SW ++++ + G + L F +S V ++ A L ACA G
Sbjct: 173 VFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGA 232
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L G +IH+ K + FVA L +Y KC KL+ +F + + D+ +W+ +I
Sbjct: 233 LNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITT 292
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Q+G+ A+ F++M S + P+E TF+ V+ A++ G QLH+LI+ +G ++
Sbjct: 293 LVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAAS 352
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V N+++ Y+KC L S F EM D+VSW+ +IAG+ H EA ELL M
Sbjct: 353 LSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRM 412
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EG P + +++L+ ++ +E GKQ H ++ G + ++ SAL++MY KCG + +
Sbjct: 413 EGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEE 472
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A ++FD + ++VSW M+ GYA+HG RE ++++ + ++P+ TFIGVLSAC H
Sbjct: 473 ASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSH 532
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
GLV+ G+HYFN+M + + ISP +H ++ L G+ A I++ P + VVW
Sbjct: 533 AGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWS 592
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL C+ H D+ GR AE+IL +P HI L+N+YA W E A +RK+MK K
Sbjct: 593 TLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKG 652
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
+ K+ G SW ++++ + F + QG D++ +++ L+
Sbjct: 653 VIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLA 692
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 250/478 (52%), Gaps = 5/478 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G +V + LL MY K +I + +++F EMP RNV+SW+A+I+G + G + AL
Sbjct: 143 VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEAL 202
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
YF M +E + YT+ A+ ACA G G+EIH + + G +++S V+N L MY
Sbjct: 203 VYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMY 262
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG L +F+ R+ +SW +++++ Q G+ ++ F+ R+S V+ +E++ A
Sbjct: 263 NKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFA 322
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+V+ CA L ++ G Q+H+L+ L V ++ +YAKC +L +S +F +
Sbjct: 323 AVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRR 382
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +WS +I GY Q G EA +L M G P+E + VL A ++ G+QLH
Sbjct: 383 DIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLH 442
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ ++ +G V + +++ Y KC +EE+ + FD + D+VSW A+I G+ +
Sbjct: 443 AYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSR 502
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSAL 420
E I+L + + G P+ T+ +L+ S ++ G + K + +
Sbjct: 503 EVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCM 562
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQEN 474
+D+ + GRL+DA + + + ++ V W+T+L HG GR E ++ N
Sbjct: 563 IDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPN 620
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 230/449 (51%), Gaps = 3/449 (0%)
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR-KSG 172
SN + K G L +A+ +FD +++ ISW +L+S Y + L +F R +SG
Sbjct: 52 SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+ I F + AC + ++ G +H K L FV L+++Y K K+
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 171
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
RVF + + ++ +W+A+I G + G EA+ F +M+ S + TF+ L A AD
Sbjct: 172 RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG 231
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
GR++H+ +K GF +FVANT+ Y+KC LE L F++M DVVSW +I
Sbjct: 232 ALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
+ A++ M PN YT++ +++ +++ IEWG+Q H I+ G +
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAA 351
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
++ + ++++ MYAKCG+L + +F ++ +++VSW+T++ GY Q G EA E+ S M+
Sbjct: 352 SLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMR 411
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
KP + VLSAC ++ ++E G ++ + G+ ++++++++ G
Sbjct: 412 MEGPKPTEFALASVLSACGNMAILEHG-KQLHAYVLSIGLEHTAMVLSALINMYCKCGSI 470
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
A ++ + V W +++G H
Sbjct: 471 EEASRIFDAAE-NDDIVSWTAMINGYAEH 498
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+++ G + + L+ MY K I +A ++FD +++SW+A+I+G+++ G
Sbjct: 445 VLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREV 504
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
++ F + L P+ T++G +SAC+ G G M + + + C+I+
Sbjct: 505 IDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMID 564
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHG 161
+ + G LS A+ + +A R+ + W +LL + C+ VHG
Sbjct: 565 LLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRA-CR----VHG 602
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/662 (34%), Positives = 361/662 (54%), Gaps = 2/662 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP--E 58
++ +G +V N L+ +Y K I A+ +F+ + ++V+SW+ LI+G+SQ G
Sbjct: 36 LLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYS 95
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
+ F+ M PN +T+ G +A +S + G + H ++ + V + LI
Sbjct: 96 FVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLI 155
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
NMY K G + A+ VFD ERN++SW +++S Y ++F L R+ A +F
Sbjct: 156 NMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKF 215
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
SVL A V + G QIH L K L V L+ +Y KC LD A + F
Sbjct: 216 IYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELS 275
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D WSA+I GYAQ G + EA++LF M +G PSE TF V+ A +D+ G+
Sbjct: 276 GDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGK 335
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H +K G+ + ++D Y+KC L ++ K FD + E D+V W ++I+G+ +
Sbjct: 336 QIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNG 395
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
A+ L M E P+ T +++L S + A+E GKQ H +K GF V IGS
Sbjct: 396 ENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGS 455
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL MYAKCG L D VF + S+++++WN M+ G +Q+G G +ALE++ ++ KP
Sbjct: 456 ALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKP 515
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ VLSAC H+GLVE G YF M+ + GI PR++H A +V + + G+ EF
Sbjct: 516 DYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEF 575
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I+S+ I+ +WR LL C+ +++ LG YA EK++ +++SA+I+LS++Y
Sbjct: 576 IESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRS 635
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
D+ +VR++MK + + K+ GCSW EL++++H F Q + + + +L H+ D
Sbjct: 636 DDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDE 695
Query: 659 GY 660
Y
Sbjct: 696 CY 697
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/489 (31%), Positives = 256/489 (52%), Gaps = 4/489 (0%)
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
+L P + ++V + C + D + GK IH ++ R+G + +++N L+N+Y KCG + A
Sbjct: 5 LLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKA 64
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGE--HVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+ VF++ ++ +SW L++ Y Q G + +++F R + + + V A +
Sbjct: 65 KLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAAS 124
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
G+Q H+L K + +D FV LIN+Y K + A +VF I + +W+
Sbjct: 125 SSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWAT 184
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I GYA A EA +LF M + ++ VL A G+Q+H L +K G
Sbjct: 185 IISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNG 244
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
S V N ++ Y KC L+++LKTF+ + D ++W+A+I G+ + EA+ L
Sbjct: 245 LLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFY 304
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+M G+ P+ +T+ ++N SDI A+E GKQ H +K G++ + +ALVDMYAKCG
Sbjct: 305 NMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCG 364
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
L DARK FD+L ++V W +M+ GYAQ+G AL +Y MQ +I P++ T VL
Sbjct: 365 SLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLR 424
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC + +E+G I+ +G S + +++ ++A G + P +
Sbjct: 425 ACSSLAALEQGKQIHAQTIK-YGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP-SRDI 482
Query: 549 VVWRCLLSG 557
+ W ++SG
Sbjct: 483 MTWNAMISG 491
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/656 (34%), Positives = 348/656 (53%), Gaps = 29/656 (4%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
++ +N LL MYVK + DA KLFDEMPERN IS+ LI G+++ A+ F +
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
E N + + + S G IH +++ G E N+ V LI+ Y CG +
Sbjct: 132 REGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVD 191
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ VFD L ++ +SW +++ + + LK+F R G + F+ ASV AC
Sbjct: 192 VAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACL 251
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L VG +H K E D +V + L++LY K +D A F I D+ WS
Sbjct: 252 GLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSF 311
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I YAQ ++ EA+++F +M + ++P++ TF+ VL A A ++ G Q+H +IK+G
Sbjct: 312 MIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIG 371
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELL 367
S FV+N ++D Y+KC +E S+ F E +DV WN +I GH+ +A+ L
Sbjct: 372 LHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLF 431
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+ML TYS+ L + + A+E G Q H VK FD ++V+ +AL+DMYAKC
Sbjct: 432 LNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKC 491
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G + DAR VFD ++ ++ VSWN M+ GY+ HGL
Sbjct: 492 GSIKDARLVFDLMNKQDEVSWNAMISGYSMHGL--------------------------- 524
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
AC + GL+++G YF SMI+DHGI P ++H +V L G +A + I P +P+
Sbjct: 525 -ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPS 583
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
+VWR LL C H D+ LGR +A+ +L +P+D + H++LSN+YA A WD A VRK
Sbjct: 584 VMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKN 643
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
MK K +KK+ G SW E Q +H F+ + + ++ ++ L + GY+P+
Sbjct: 644 MKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPN 699
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 252/490 (51%), Gaps = 3/490 (0%)
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
E N + Y A+ C + + GK +H + + G L+ N L+NMY K L A
Sbjct: 35 EFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASK 94
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
+FD ERN+IS+V+L+ Y + + +++F+ + G ++ F ++L +
Sbjct: 95 LFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDC 154
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
++G IH+ +FK E + FV LI+ Y+ C ++D+A VF I D+ +W+ ++
Sbjct: 155 GELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTC 214
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
+A+ EA+ LF +M G P+ TF+ V A ++ G+ +H +K +
Sbjct: 215 FAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELD 274
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+V +LD Y+K ++++ F+E+ + DV+ W+ +IA + S EA+E+ M
Sbjct: 275 LYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQ 334
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
PN +T++++L + + + G Q HC ++K G S+V + +AL+D+YAKCGR+ +
Sbjct: 335 ALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMEN 394
Query: 433 ARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
+ +F +N V+ WNT++VG+ Q G G +AL ++ M E +++ + T+ L AC
Sbjct: 395 SMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACA 454
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
+ +E G +S+ + +++ ++A G + A + + ++V W
Sbjct: 455 SLAALEPGLQ-IHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA-RLVFDLMNKQDEVSW 512
Query: 552 RCLLSGCKTH 561
++SG H
Sbjct: 513 NAMISGYSMH 522
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 193/351 (54%), Gaps = 1/351 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N L+ Y R++ A+++FD + ++++SW+ +++ F++ + AL F
Sbjct: 169 GHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLF 228
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M +PN +T+ AC GK +HG +S EL+ +V L+++Y K
Sbjct: 229 SQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKS 288
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A+ F+ +++ I W +++ Y Q + +++F R++ V ++F+ ASVL
Sbjct: 289 GDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVL 348
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS-NIQLPDL 243
ACA + L +G QIH V K L D FV+ L+++YAKC +++ + +F+ + D+
Sbjct: 349 QACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDV 408
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
T W+ +I G+ QLG +A+ LF+ M + +EVT+S L A A + G Q+HSL
Sbjct: 409 TPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSL 468
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
+K F V N ++D Y+KC ++++ FD M++ D VSWNA+I+G+
Sbjct: 469 TVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGY 519
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 35/257 (13%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERN-VISWSALISGFSQIGMPEV 59
+I G H +V N L+ +Y K R+ ++ LF E P RN V W+ +I G Q+G E
Sbjct: 367 VIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEK 426
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL F M+ ++ TY A+ ACAS G +IH ++ + + V+N LI+
Sbjct: 427 ALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALID 486
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG + A+ VFD +++ +SW +++S Y +HGL
Sbjct: 487 MYAKCGSIKDARLVFDLMNKQDEVSWNAMISGY-----SMHGL----------------- 524
Query: 180 CASVLGACAVLGNLKVGMQ-IHSLVFKCALE--FDKFVAMGLINLYAKCEKLDLASRVFS 236
ACA G L G S++ +E + + M + L + LD A ++
Sbjct: 525 ------ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCM--VWLLGRGGHLDKAVKLID 576
Query: 237 NIQL-PDLTAWSALIGG 252
I P + W AL+G
Sbjct: 577 EIPFQPSVMVWRALLGA 593
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/626 (32%), Positives = 360/626 (57%), Gaps = 8/626 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL Y + A++L DEMP RN +S++ LI +S+ G+ ++L ++
Sbjct: 47 NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVD 106
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
+ ++Y A++AC+ G R+G+ +H GL VSN L++MY KCG + A+ V
Sbjct: 107 VDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRV 166
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN- 192
FD + ER+ +SW SL+S Y + G +++F + R+ G+ ++ F+ SV+ C+ G+
Sbjct: 167 FDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDG 226
Query: 193 -LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+ + +H V K L+ D F+ +I++YAK L A+ +F ++Q P++ ++ +I
Sbjct: 227 TMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIA 286
Query: 252 GYAQ----LGK--ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
G+ + +GK A EA+ L+ ++ S G+ P+E TFS VL A G+Q+H +I
Sbjct: 287 GFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVI 346
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K F F+ + ++D Y +E+ + F +HD+V+W A+++G + + + +A+
Sbjct: 347 KYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALS 406
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L + L G P+L+T S+++N + + G+Q C K GFD V+G++ V MYA
Sbjct: 407 LFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYA 466
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
+ G ++ A + F + S ++VSW+ ++ +AQHG R+AL + M + K+ PN+ TF+G
Sbjct: 467 RSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLG 526
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
VL+AC H GLV+EG Y+ +M +D+G+SP + H VV L G+ A FI +S
Sbjct: 527 VLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFH 586
Query: 546 PNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVR 605
+ V+WR LL+ C+ H+DL G+ A +I+ +P ++++++L N+Y +A +K R
Sbjct: 587 ADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTR 646
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYF 631
+MK++ +KK+ G SW EL+ +H F
Sbjct: 647 DLMKQRGVKKEPGLSWIELKCGVHSF 672
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 229/467 (49%), Gaps = 10/467 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G V N L+ MY K + +A+++FD ER+ +SW++L+SG+ + G E +
Sbjct: 136 ILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMV 195
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARS--GKEIHGRMYRSGLELNSHVSNCLIN 119
F +M + N + + C+ RGD + +HG + ++GL+ + + + +I+
Sbjct: 196 RVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMID 255
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC----GEHV--HGLKIFLLSRKSGV 173
MY K G L A +F + E N + + ++++ +C+ G+ V L ++ + G+
Sbjct: 256 MYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGM 315
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+EF+ +SVL AC + G L+ G QIH V K + D F+ LI+LY ++ R
Sbjct: 316 QPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFR 375
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
F + D+ W+A++ G Q +A+ LF + +GL P T S V+ A A +
Sbjct: 376 CFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAV 435
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G Q+ K GF FT + N+ + Y++ ++ + + F EM+ HDVVSW+A+I+
Sbjct: 436 ARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISC 495
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDS 412
H +A+ +M+ PN T+ +L S ++ G + + + K G
Sbjct: 496 HAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSP 555
Query: 413 NVVIGSALVDMYAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQH 458
+ + +VD+ + GRL DA + + + + V W ++L H
Sbjct: 556 TIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIH 602
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 196/400 (49%), Gaps = 18/400 (4%)
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
+ N L+ Y + G A+ + D RN++S+ L+ +Y + G L+ +R++G
Sbjct: 45 LRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAG 104
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
V + FS A+ L AC+ G+L+ G +H+L L FV+ L+++Y+KC ++ A
Sbjct: 105 VDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEAR 164
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA--- 289
RVF + D +W++L+ GY + G E + +F M G+ + V+ +
Sbjct: 165 RVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRG 224
Query: 290 ----DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
D+ E + H +IK G S F+ + ++D Y+K L E+ F + E +VV
Sbjct: 225 DGTMDIAEAV-----HGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVV 279
Query: 346 SWNALIAGH------LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
+N +IAG + EA+ L ++ G P +T+S++L + +E+GK
Sbjct: 280 MFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGK 339
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
Q H ++K F + IGSAL+D+Y G + D + F ++V+W M+ G Q+
Sbjct: 340 QIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNE 399
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
L +AL ++ +KP+ T V++AC + + G
Sbjct: 400 LHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAG 439
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 197/417 (47%), Gaps = 23/417 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ----IG- 55
+I +G +V + ++ MY K + +A LF + E NV+ ++ +I+GF + IG
Sbjct: 238 VIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGK 297
Query: 56 -MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
+ AL + + ++P +T+ + AC G GK+IHG++ + + + +
Sbjct: 298 EVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIG 357
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
+ LI++Y G + F +S + + ++W +++S Q H L +F S +G+
Sbjct: 358 SALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLK 417
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLAS 232
F+ +SV+ ACA L + G QI K FD+F MG +++YA+ +D A+
Sbjct: 418 PDLFTISSVMNACASLAVARAGEQIQCFATKSG--FDRFTVMGNSCVHMYARSGDVDAAT 475
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD-- 290
R F ++ D+ +WSA+I +AQ G A +A+ F +M + ++P+E+TF VL A +
Sbjct: 476 RRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGG 535
Query: 291 -VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWN 348
V E G R ++ G S V+D + L ++ H D V W
Sbjct: 536 LVDE--GLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWR 593
Query: 349 ALIAGHLASCHYGEAIE---LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
+L LASC +E L+ + + E + +Y + N+ D + +T
Sbjct: 594 SL----LASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTR 646
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/650 (34%), Positives = 355/650 (54%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL Y K + A++LFD MPERN +S+ L+ G++ G E AL FR + E
Sbjct: 86 NVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHE 145
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N++ + + IH + G + N+ V LI+ Y CG + A+ V
Sbjct: 146 VNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCV 205
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD + +++++W +++S Y + + L F R +G + F S L A L +
Sbjct: 206 FDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSA 265
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G IH K + + V L+++YAKC ++ A +F I D+ WS LI Y
Sbjct: 266 LLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRY 325
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
AQ + +A ++F++M S ++P+E + S VL A A++ G Q+H+L IK+G+ S
Sbjct: 326 AQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESEL 385
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
FV N ++D Y+KC +E SL+ F + + + VSWN +I G+ S +A+ + +M
Sbjct: 386 FVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAA 445
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
T+S++L ++ +I+ Q H I K F+++ ++ ++L+D YAKCG + DA
Sbjct: 446 HMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDA 505
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
KVF+ + ++VSWN+++ YA HG ALE++ M ++ IK ND TF+ +LS C
Sbjct: 506 LKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGST 565
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLV +G FNSM+ DH I P M+H +V L G+ A +FI P P+ +VWR
Sbjct: 566 GLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRA 625
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LLS C HK++ LGRYAAEK+L +P D + +++LSN+YA A + DE A RK M+ +
Sbjct: 626 LLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGV 685
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
KK+ G SW E++ ++H FS ++ ++ L++ GYVPD
Sbjct: 686 KKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPD 735
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/532 (27%), Positives = 263/532 (49%), Gaps = 13/532 (2%)
Query: 41 VISWSALISGFSQIG-------MPEVALNYFRLMVCCVLEPNYYTYVGA--VSACASRGD 91
+I +L+ FSQI AL + + + P +Y A + C +RGD
Sbjct: 1 MIRSRSLLPTFSQINGLLSRNLAANEALQWLDDELASLALPKLDSYACARFLQRCIARGD 60
Query: 92 ARSGKEIHGRMYRSG--LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
AR+G+ +H R+ + G +L++ +N L+N Y K G L++A+ +FD ERN +S+V+L+
Sbjct: 61 ARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLM 120
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
Y GE L++F ++ G ++ F ++L + + IH+ K +
Sbjct: 121 QGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHD 180
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
+ FV LI+ Y+ C + A VF I D W+A++ Y++ A++ F KM
Sbjct: 181 RNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKM 240
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
+G P+ + L A + + G+ +H +K + + V +LD Y+KC +
Sbjct: 241 RMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDI 300
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
E++ F+ + DV+ W+ LI+ + SC +A E+ M+ PN ++ S +L
Sbjct: 301 EDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQAC 360
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
++I +E G+Q H +K G++S + +G+AL+DMYAKC + ++ ++F L N VSWN
Sbjct: 361 ANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWN 420
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
T++VGY Q G +AL ++ M+ + TF VL AC + ++ +S+I
Sbjct: 421 TIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQ-IHSLIEK 479
Query: 510 HGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ S++ +A G R A + + S +E + V W ++S H
Sbjct: 480 STFNNDTIVCNSLIDTYAKCGFIRDALKVFE-SIVECDVVSWNSIISAYALH 530
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/493 (30%), Positives = 252/493 (51%), Gaps = 18/493 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N L+ Y + A+ +FD + ++ ++W+A++S +S+ +PE ALN F
Sbjct: 178 GHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTF 237
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M +PN + A+ A A GK IHG ++ + HV L++MY KC
Sbjct: 238 SKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKC 297
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A +F+ + I W L+S Y Q ++ ++FL +S V +EFS + VL
Sbjct: 298 GDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVL 357
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA + L++G QIH+L K E + FV L+++YAKC ++ + +FS++Q +
Sbjct: 358 QACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEV 417
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ +I GY Q G A +A+ +F +M ++ ++ ++VTFS VL A A+ Q+HSLI
Sbjct: 418 SWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLI 477
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
K F++ T V N+++D Y+KC + ++LK F+ + E DVVSWN++I+ + A+
Sbjct: 478 EKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNAL 537
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGSA 419
EL M N T+ ++L++ + G + +KP + I
Sbjct: 538 ELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCI--- 594
Query: 420 LVDMYAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQH---GLGREALEIYSMMQENK 475
V + + GRL DA K + D S+ + + W +L H LGR A E +
Sbjct: 595 -VRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAE-----KVLD 648
Query: 476 IKPNDNTFIGVLS 488
I+P+D T +LS
Sbjct: 649 IEPHDETTYVLLS 661
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 197/421 (46%), Gaps = 15/421 (3%)
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFK--CALEFDKFVAMGLINLYAKCEKLDLAS 232
+ ++CA L C G+ + G +H+ V + + D F A L+N YAK L A
Sbjct: 43 LDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATAR 102
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
R+F + + ++ L+ GYA G+ EA++LF ++ G + + +L +
Sbjct: 103 RLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMD 162
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
+H+ K+G FV ++D YS C + + FD + D V+W A+++
Sbjct: 163 APGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVS 222
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
+ + A+ M G PN + ++ L + + + GK H C VK +D+
Sbjct: 223 CYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDT 282
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+G AL+DMYAKCG + DA +F+ + +++ W+ ++ YAQ +A E++ M
Sbjct: 283 EPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMM 342
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQ 531
+ + PN+ + GVL AC +I +E G N I+ G + +++ ++A CR
Sbjct: 343 RSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIK-LGYESELFVGNALMDMYAKCRNM 401
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSG-CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN 590
F SS + N+V W ++ G C++ AE LS E +AH++ +
Sbjct: 402 ENSLEIF--SSLQDANEVSWNTIIVGYCQSG--------FAEDALSVFHEMRAAHMLSTQ 451
Query: 591 V 591
V
Sbjct: 452 V 452
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 121/251 (48%), Gaps = 2/251 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G+ + N L+ MY K + ++ ++F + + N +SW+ +I G+ Q G E AL
Sbjct: 377 IKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDAL 436
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F M + T+ + ACA+ + +IH + +S ++ V N LI+ Y
Sbjct: 437 SVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTY 496
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A VF++ +E + +SW S++S+Y G + L++F KS + ++ +
Sbjct: 497 AKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFV 556
Query: 182 SVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-Q 239
S+L C G + G+ + +S++ ++ ++ L + +L A + +I
Sbjct: 557 SLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPS 616
Query: 240 LPDLTAWSALI 250
P W AL+
Sbjct: 617 TPSPMVWRALL 627
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/688 (33%), Positives = 382/688 (55%), Gaps = 19/688 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRI--NDAQKLFDEMPE--RNVISWSALISGFSQIGMP 57
+ SG + N L+ Y F R+ A +F ++P R+V SW++L++ S P
Sbjct: 39 LKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLNPLSH-HRP 97
Query: 58 EVALNYFRLMVCC-VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSN 115
AL++FR M+ + P+ +++ A +A A A +G +H + N VS
Sbjct: 98 LAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSASSNVFVST 157
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC--QCGEHVHGLKIFLLSRKSGV 173
L+NMY K GL+ AQ VFD RN +SW ++++ Y +C + L +L + +
Sbjct: 158 ALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLG-ECPL 216
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+EF +VL A +V L +G+Q+H LV K + V L+ +YAK +D A
Sbjct: 217 HKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFH 276
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
VF + + + WSA+I GY+Q G A A+ +F +M ++G P+E T VL A +DV
Sbjct: 277 VFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGT 336
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
+ G+Q H L++K+GF +V + ++D Y+KC + ++ + F++ E D+V W A++ G
Sbjct: 337 LMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTG 396
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
H+ + + +A+ L M EG PN T +++L + + A+E GKQ H I+K GF
Sbjct: 397 HVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLG 456
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+GSAL MY+KCG L D VF + +++++WN+++ G++Q+G G +A+ ++ M+
Sbjct: 457 ASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKL 516
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
P+ TFI VL AC H+GLV+ GW YF SMI+D+G++PR+DH A +V + + G
Sbjct: 517 EGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLS 576
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A +FI+S I+ +WR +L C++ +D +G YA EK++ D++A+I+LSN+YA
Sbjct: 577 EAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSAAYILLSNIYA 636
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W++ +VR +MK + KD GCSW EL +++H F ++ + +L
Sbjct: 637 AQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVVGEQQHPDAEIINTELRRLGK 696
Query: 654 HLFDGGY---------VPDPIYSSHFEE 672
H+ D GY VPD + SH E+
Sbjct: 697 HMKDEGYNPASKYSRDVPDALGESHQED 724
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 211/430 (49%), Gaps = 12/430 (2%)
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL----SSAQFVFDASLERNS 142
ASR R G+ +H +SG ++ VSN LI Y L + A F + R+
Sbjct: 25 ASR--PRDGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDV 82
Query: 143 ISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
SW SLL+ + L F +LS S + S S A+ A A + G +H
Sbjct: 83 ASWNSLLNPLSH-HRPLAALSHFRSMLS-SSTILPSPHSFAAAFTAAARAHSASAGAVVH 140
Query: 201 SLVFKC-ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
+L K + + FV+ L+N+Y K + A VF + + +W+A++ GYA +
Sbjct: 141 ALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCS 200
Query: 260 CEAIDLFVKMFSS-GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
EA +LF +M L +E + VL A + G Q+H L++K G F V N+
Sbjct: 201 QEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENS 260
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
++ Y+K ++ + F+ E + ++W+A+I G+ + + A+ + M G P
Sbjct: 261 LVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPT 320
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
+T +LN SD+ + GKQ H +VK GF+ V + SALVDMYAKCG + DA++ F+
Sbjct: 321 EFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFN 380
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
S ++V W M+ G+ Q+G +AL +Y+ M + + PN T +L AC + +E
Sbjct: 381 QFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEP 440
Query: 499 GWHYFNSMIR 508
G +++
Sbjct: 441 GKQLHTQILK 450
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 130/269 (48%), Gaps = 12/269 (4%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCE--LLEESLKTFDEMD--EHDVVSWNALIA 352
G LH+ +K G SS V+N+++ FYS L + F ++ DV SWN+L+
Sbjct: 31 GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLL- 89
Query: 353 GHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVK-PGF 410
L+ A+ + ML P+ ++++ ++ + G H K P
Sbjct: 90 NPLSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSA 149
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-S 469
SNV + +AL++MY K G + DA+ VFD + +N VSW M+ GYA +EA E++
Sbjct: 150 SSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQ 209
Query: 470 MMQENKIKPNDNTFIGVLSA-CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
M+ E + N+ VLSA V +GL G +++D G+ + S+V ++A
Sbjct: 210 MLGECPLHKNEFVATAVLSAISVPLGL-PMGVQVHGLVVKD-GMVGFVSVENSLVTMYAK 267
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G A+ +SS E N + W +++G
Sbjct: 268 AGCMDAAFHVFESSK-ERNSITWSAMITG 295
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/673 (33%), Positives = 378/673 (56%), Gaps = 12/673 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP---ERNVISWSALISGFSQIGMP 57
+I P+ + YN L+ +Y K + A+ +F+ M +R+V+SWSA+++ F G
Sbjct: 88 LIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGRE 147
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNC 116
A+ F + L PN Y Y + AC++ G+ I G + ++G E + V
Sbjct: 148 FDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCS 207
Query: 117 LINMYGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
LI+M+ K +A VFD E N ++W +++ Q G ++ FL SG
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE---KLDLAS 232
+F+ +SV ACA L NL +G Q+HS + L D V L+++YAKC +D
Sbjct: 268 DKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADD--VECSLVDMYAKCSADGSVDDCR 325
Query: 233 RVFSNIQLPDLTAWSALIGGYAQ-LGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFAD 290
+VF +Q + +W+ALI GY Q A EAI+LF +M + G + P+ TFS A +
Sbjct: 326 KVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
V + G+Q+ K G +S + V+N+V+ + KC+ +E++ F+ + E ++VS+N
Sbjct: 386 VSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTF 445
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
+ G + + A ELL ++ + +T++++L+ +++ ++ G+Q H ++K G
Sbjct: 446 LDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGL 505
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
N + +AL+ MY+KCG ++ A +VF + ++N++SW +M+ G+A+HG LE ++
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQ 565
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M + +KPN+ T++ +LSAC H+GLV EGW +FNSM DH I P+M+H A +V L G
Sbjct: 566 MTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAG 625
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN 590
A+EFI + P + + +VWR L C+ H + LG+ AA KIL DP + +A+I LSN
Sbjct: 626 LLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSN 685
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQ 650
+YA A W+E+ ++R+ MKE++L K+ GCSW E+ +K+H F + +++ ++
Sbjct: 686 IYASAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDW 745
Query: 651 LSVHLFDGGYVPD 663
L + GYVPD
Sbjct: 746 LITEIKRCGYVPD 758
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 146/510 (28%), Positives = 256/510 (50%), Gaps = 21/510 (4%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T+ + +C R GK +H R+ +E +S + N LI++Y K G L+ A+ VF+
Sbjct: 64 TFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETM 123
Query: 138 ---LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
+R+ +SW ++++ + G +K+F+ + G+ +++ +V+ AC+ +
Sbjct: 124 GRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVG 183
Query: 195 VGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEK-LDLASRVFSNIQLPDLTAWSALIGG 252
VG I + K E D V LI+++ K E + A +VF + ++ W+ +I
Sbjct: 184 VGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Q+G EAI F+ M SG + T S V A A+++ GRQLHS I+ G +
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLAD- 302
Query: 313 TFVANTVLDFYSKCEL---LEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EAIELLK 368
V +++D Y+KC +++ K FD M +H V+SW ALI G++ +C+ EAI L
Sbjct: 303 -DVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFS 361
Query: 369 DMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+M+ +GH PN +T+S+ ++ GKQ K G SN + ++++ M+ KC
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKC 421
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
R+ DAR F+ LS KNLVS+NT L G ++ A E+ S + E ++ + TF +L
Sbjct: 422 DRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLL 481
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
S ++G + +G +S + G+S +++ +++ G A + S N
Sbjct: 482 SGVANVGSLRKG-EQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASR-VFSLMDNRN 539
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILST 577
+ W +++G H AE++L T
Sbjct: 540 VISWTSMITGFAKHG-------FAERVLET 562
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 178/338 (52%), Gaps = 12/338 (3%)
Query: 166 LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC 225
L++R + + +S+L +C + ++G +H+ + + +E D + LI+LY+K
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKS 110
Query: 226 EKLDLASRVFSNIQL---PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
L A VF + D+ +WSA++ + G+ +AI LFV+ GL+P++ ++
Sbjct: 111 GDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYT 170
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCE-LLEESLKTFDEMD 340
V+ A ++ GR + ++K G F S V +++D + K E E + K FD+M
Sbjct: 171 AVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
E +VV+W +I + EAI DM+ G + +T S++ + +++ + G+Q
Sbjct: 231 ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQ 290
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKC---GRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
H ++ G +V +LVDMYAKC G ++D RKVFD + +++SW ++ GY Q
Sbjct: 291 LHSWAIRSGLADDV--ECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQ 348
Query: 458 H-GLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHI 493
+ L EA+ ++S M+ + ++PN TF AC ++
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNV 386
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/541 (36%), Positives = 330/541 (60%), Gaps = 4/541 (0%)
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VFD ERN ++W +++ + Q G + +FL SG F+ +SVL AC LG
Sbjct: 12 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 71
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE---KLDLASRVFSNIQLPDLTAWSAL 249
L +G Q+HS V + L D V L+++YAKC +D + +VF + ++ +W+A+
Sbjct: 72 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131
Query: 250 IGGYAQLGKA-CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
I YAQ G+ EAI+LF KM S + P+ +FS VL A ++ + G Q++S +K+G
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
+S V N+++ Y++ +E++ K FD + E ++VS+NA++ G+ + EA L
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 251
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
++ G + +T++++L+ ++ I A+ G+Q H ++K G+ SN I +AL+ MY++CG
Sbjct: 252 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 311
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ A +VF+ + +N++SW +M+ G+A+HG ALE++ M E KPN+ T++ VLS
Sbjct: 312 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 371
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H+G++ EG +FNSM ++HGI PRM+H A +V L G A EFI S P+ +
Sbjct: 372 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 431
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
+VWR LL C+ H + LGR+AAE IL +P+D +A+I+LSN++A A W + K+RK M
Sbjct: 432 LVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 491
Query: 609 KEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSS 668
KE++L K+ GCSW E++N++H F + Q +++ ++QL+ + + GY+PD +
Sbjct: 492 KERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVL 551
Query: 669 H 669
H
Sbjct: 552 H 552
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 237/448 (52%), Gaps = 9/448 (2%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A K+FD+MPERN+++W+ +I+ F+Q+G A++ F M P+ +TY +SAC
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC---GLLSSAQFVFDASLERNSISW 145
G GK++H R+ R GL L+ V L++MY KC G + ++ VF+ E N +SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 146 VSLLSSYCQCGE-HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF 204
+++++Y Q GE +++F + + FS +SVL AC L + G Q++S
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
K + V LI++YA+ +++ A + F + +L +++A++ GYA+ K+ EA
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
LF ++ +G+ S TF+ +L A + G Q+H ++K G+ S + N ++ YS
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 308
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
+C +E + + F+EM++ +V+SW ++I G A+E+ ML G PN TY
Sbjct: 309 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 368
Query: 385 ILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-S 442
+L+ S + I G++ + K G + + +VD+ + G L +A + + +
Sbjct: 369 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 428
Query: 443 KNLVSWNTMLVGYAQHG---LGREALEI 467
+ + W T+L HG LGR A E+
Sbjct: 429 ADALVWRTLLGACRVHGNTELGRHAAEM 456
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 195/359 (54%), Gaps = 6/359 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFS---RINDAQKLFDEMPERNVISWSALISGFSQIG-M 56
+I G +V L+ MY K + ++D++K+F++MPE NV+SW+A+I+ ++Q G
Sbjct: 82 VIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGEC 141
Query: 57 PEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
+ A+ F M+ + PN++++ + AC + D +G++++ + G+ + V N
Sbjct: 142 DKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNS 201
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
LI+MY + G + A+ FD E+N +S+ +++ Y + + +F +G+ IS
Sbjct: 202 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 261
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
F+ AS+L A +G + G QIH + K + ++ + LI++Y++C ++ A +VF+
Sbjct: 262 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 321
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE-TI 295
++ ++ +W+++I G+A+ G A A+++F KM +G P+E+T+ VL A + V +
Sbjct: 322 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 381
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
G + +S+ + G ++D + LL E+++ + M D + W L+
Sbjct: 382 GQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 440
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 133/254 (52%), Gaps = 11/254 (4%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ MY + R+ DA+K FD + E+N++S++A++ G+++ E A F + +
Sbjct: 200 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 259
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
+ +T+ +S AS G G++IHGR+ + G + N + N LI+MY +CG + +A V
Sbjct: 260 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 319
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ +RN ISW S+++ + + G L++F ++G +E + +VL AC+ +G +
Sbjct: 320 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 379
Query: 194 KVGMQIHSLVFK---CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSAL 249
G + + ++K + + M ++L + L A +++ L D W L
Sbjct: 380 SEGQKHFNSMYKEHGIVPRMEHYACM--VDLLGRSGLLVEAMEFINSMPLMADALVWRTL 437
Query: 250 IG-----GYAQLGK 258
+G G +LG+
Sbjct: 438 LGACRVHGNTELGR 451
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ N N L+ MY + I A ++F+EM +RNVISW+++I+GF++ G A
Sbjct: 288 LLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRA 347
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F M+ +PN TYV +SAC+ G G++ MY+ G+ C+++
Sbjct: 348 LEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVD 407
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHG 161
+ G+ GLL A +F+ L +++ W +LL + C+ VHG
Sbjct: 408 LLGRSGLLVEAMEFINSMPLMADALVWRTLLGA-CR----VHG 445
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A KVFD + +NLV+W M+ +AQ G R+A++++ M+ + P+ T+ VLSAC
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 493 IGLVEEGWHYFNSMIR 508
+GL+ G + +IR
Sbjct: 69 LGLLALGKQLHSRVIR 84
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/667 (31%), Positives = 369/667 (55%), Gaps = 5/667 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+GF + + L LMY + +A ++FD++ + W+ L++ ++ G ++
Sbjct: 123 NGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F+ M+ +E + YT+ + +S G+++HG + +SG + V N L+ Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLK 242
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
+ SA+ VFD ER+ ISW S+++ Y G GL +F+ SG+ I + SV
Sbjct: 243 NHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSV 302
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
CA + +G +H K + L+++Y+KC LD A VF + +
Sbjct: 303 FAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSV 362
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+++++I GYA+ G A EA+ LF +M G+ P T + VL A + G+++H
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEW 422
Query: 304 IIK--MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
I + MGF FV+N ++D Y+KC + E+ F EM D++SWN +I G+ +C+
Sbjct: 423 IKENDMGFD--IFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYAN 480
Query: 362 EAIELLKDMLFEGH-CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ L +L E P+ T + +L + + A + G++ H I++ G+ S+ + ++L
Sbjct: 481 EALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSL 540
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAKCG L AR +FD ++SK+LVSW M+ GY HG G+EA+ +++ M++ I+P++
Sbjct: 541 VDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDE 600
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
+F+ +L AC H GLV+EGW +FN M + I P ++H A +V + A G +AY FI+
Sbjct: 601 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIE 660
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+ PI P+ +W LL GC+ H D+ L AEK+ +PE+T +++++N+YAEA W+E
Sbjct: 661 NMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEE 720
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
++RK + ++ L+K+ GCSW E++ +++ F + + + + + + + GY
Sbjct: 721 VKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGY 780
Query: 661 VPDPIYS 667
P Y+
Sbjct: 781 SPLTKYA 787
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/529 (27%), Positives = 263/529 (49%), Gaps = 13/529 (2%)
Query: 38 ERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE 97
+R+V + + F + G + A+ + ++P T + CA + GKE
Sbjct: 58 DRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
+ + +G L+S++ + L MY CG L A VFD ++ W L++ + G+
Sbjct: 116 VDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGD 175
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
+ +F SGV + ++ + V + + L ++ G Q+H + K V
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNS 235
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
L+ Y K ++D A +VF + D+ +W+++I GY G A + + +FV+M SG+
Sbjct: 236 LVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEID 295
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
T V AD + GR +H +K FS NT+LD YSKC L+ + F
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFR 355
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
EM VVS+ ++IAG+ GEA++L ++M EG P++YT + +LN + ++
Sbjct: 356 EMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDE 415
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
GK+ H I + ++ + +AL+DMYAKCG + +A VF + K+++SWNT++ GY++
Sbjct: 416 GKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSK 475
Query: 458 HGLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
+ EAL +++ ++ E + P++ T VL AC + ++G ++R+ S R
Sbjct: 476 NCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR- 534
Query: 517 DHIA-SVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
H+A S+V ++A G R ++ I S + V W +++G H
Sbjct: 535 -HVANSLVDMYAKCGALLLARLLFDDITSKDL----VSWTVMIAGYGMH 578
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/465 (30%), Positives = 240/465 (51%), Gaps = 11/465 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF N L+ Y+K R++ A+K+FDEM ER+VISW+++I+G+ G+ E
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ +E + T V + CA G+ +H ++ N L++M
Sbjct: 281 LSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDM 340
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L SA+ VF R+ +S+ S+++ Y + G +K+F + G++ ++
Sbjct: 341 YSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL CA L G ++H + + + FD FV+ L+++YAKC + A VFS +++
Sbjct: 401 TAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRV 460
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLF-VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +W+ +IGGY++ A EA+ LF + + P E T + VL A A + GR+
Sbjct: 461 KDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H I++ G+ S VAN+++D Y+KC L + FD++ D+VSW +IAG+
Sbjct: 521 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGF 580
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSNV 414
EAI L M G P+ ++ ++L S ++ G + H C ++P +
Sbjct: 581 GKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 640
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
I VDM A+ G L+ A + +++ + W +L G H
Sbjct: 641 CI----VDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIH 681
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/541 (36%), Positives = 330/541 (60%), Gaps = 4/541 (0%)
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VFD ERN ++W +++ + Q G + +FL SG F+ +SVL AC LG
Sbjct: 7 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 66
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE---KLDLASRVFSNIQLPDLTAWSAL 249
L +G Q+HS V + L D V L+++YAKC +D + +VF + ++ +W+A+
Sbjct: 67 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126
Query: 250 IGGYAQLGKA-CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
I YAQ G+ EAI+LF KM S + P+ +FS VL A ++ + G Q++S +K+G
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
+S V N+++ Y++ +E++ K FD + E ++VS+NA++ G+ + EA L
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 246
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
++ G + +T++++L+ ++ I A+ G+Q H ++K G+ SN I +AL+ MY++CG
Sbjct: 247 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 306
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ A +VF+ + +N++SW +M+ G+A+HG ALE++ M E KPN+ T++ VLS
Sbjct: 307 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 366
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H+G++ EG +FNSM ++HGI PRM+H A +V L G A EFI S P+ +
Sbjct: 367 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 426
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
+VWR LL C+ H + LGR+AAE IL +P+D +A+I+LSN++A A W + K+RK M
Sbjct: 427 LVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 486
Query: 609 KEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSS 668
KE++L K+ GCSW E++N++H F + Q +++ ++QL+ + + GY+PD +
Sbjct: 487 KERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVL 546
Query: 669 H 669
H
Sbjct: 547 H 547
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 237/448 (52%), Gaps = 9/448 (2%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A K+FD+MPERN+++W+ +I+ F+Q+G A++ F M P+ +TY +SAC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC---GLLSSAQFVFDASLERNSISW 145
G GK++H R+ R GL L+ V L++MY KC G + ++ VF+ E N +SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 146 VSLLSSYCQCGE-HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF 204
+++++Y Q GE +++F + + FS +SVL AC L + G Q++S
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
K + V LI++YA+ +++ A + F + +L +++A++ GYA+ K+ EA
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
LF ++ +G+ S TF+ +L A + G Q+H ++K G+ S + N ++ YS
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
+C +E + + F+EM++ +V+SW ++I G A+E+ ML G PN TY
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 363
Query: 385 ILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-S 442
+L+ S + I G++ + K G + + +VD+ + G L +A + + +
Sbjct: 364 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 423
Query: 443 KNLVSWNTMLVGYAQHG---LGREALEI 467
+ + W T+L HG LGR A E+
Sbjct: 424 ADALVWRTLLGACRVHGNTELGRHAAEM 451
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 195/359 (54%), Gaps = 6/359 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFS---RINDAQKLFDEMPERNVISWSALISGFSQIG-M 56
+I G +V L+ MY K + ++D++K+F++MPE NV+SW+A+I+ ++Q G
Sbjct: 77 VIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGEC 136
Query: 57 PEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
+ A+ F M+ + PN++++ + AC + D +G++++ + G+ + V N
Sbjct: 137 DKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNS 196
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
LI+MY + G + A+ FD E+N +S+ +++ Y + + +F +G+ IS
Sbjct: 197 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 256
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
F+ AS+L A +G + G QIH + K + ++ + LI++Y++C ++ A +VF+
Sbjct: 257 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 316
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE-TI 295
++ ++ +W+++I G+A+ G A A+++F KM +G P+E+T+ VL A + V +
Sbjct: 317 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 376
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
G + +S+ + G ++D + LL E+++ + M D + W L+
Sbjct: 377 GQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 435
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 133/254 (52%), Gaps = 11/254 (4%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ MY + R+ DA+K FD + E+N++S++A++ G+++ E A F + +
Sbjct: 195 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 254
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
+ +T+ +S AS G G++IHGR+ + G + N + N LI+MY +CG + +A V
Sbjct: 255 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 314
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ +RN ISW S+++ + + G L++F ++G +E + +VL AC+ +G +
Sbjct: 315 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 374
Query: 194 KVGMQIHSLVFK---CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSAL 249
G + + ++K + + M ++L + L A +++ L D W L
Sbjct: 375 SEGQKHFNSMYKEHGIVPRMEHYACM--VDLLGRSGLLVEAMEFINSMPLMADALVWRTL 432
Query: 250 IG-----GYAQLGK 258
+G G +LG+
Sbjct: 433 LGACRVHGNTELGR 446
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ N N L+ MY + I A ++F+EM +RNVISW+++I+GF++ G A
Sbjct: 283 LLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRA 342
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F M+ +PN TYV +SAC+ G G++ MY+ G+ C+++
Sbjct: 343 LEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVD 402
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHG 161
+ G+ GLL A +F+ L +++ W +LL + C+ VHG
Sbjct: 403 LLGRSGLLVEAMEFINSMPLMADALVWRTLLGA-CR----VHG 440
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A KVFD + +NLV+W M+ +AQ G R+A++++ M+ + P+ T+ VLSAC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 493 IGLVEEGWHYFNSMIR 508
+GL+ G + +IR
Sbjct: 64 LGLLALGKQLHSRVIR 79
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/701 (30%), Positives = 384/701 (54%), Gaps = 37/701 (5%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALIS------------- 49
T+ + ++ N LL K ++NDA+KLFD+MP+++ SW+ +IS
Sbjct: 58 TAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARE 117
Query: 50 ------------------GFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGD 91
G+ + G A + FR M + + +T + C+S G
Sbjct: 118 LFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGL 177
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE---RNSISWVSL 148
++G+ IHG + ++G E N V L++MY KC +S A+F+F LE +N + W ++
Sbjct: 178 IQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKG-LEFDRKNHVLWTAM 236
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
++ Y Q G+ ++ F GV ++++ ++L AC+ + G Q+H + K
Sbjct: 237 VTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGF 296
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+ +V L+++YAKC L A + ++ D+ +W++L+ G+ + G EA+ LF
Sbjct: 297 GSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKN 356
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M + + TF VL V +I + +H LIIK GF ++ V+N ++D Y+K
Sbjct: 357 MHGRNMKIDDYTFPSVLNCC--VVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGD 414
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
++ + F++M E DV+SW +L+ G+ + + E++++ DM G P+ + ++IL+
Sbjct: 415 MDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSA 474
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+++ +E+GKQ H +K G + + ++LV MYAKCG L+DA +F + K++++W
Sbjct: 475 CAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITW 534
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
++VGYAQ+G GR +L+ Y M + +P+ TFIG+L AC H GLV+EG YF M +
Sbjct: 535 TAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNK 594
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
+GI P +H A ++ LF G+ A + + ++P+ VW+ LLS C+ H++L L
Sbjct: 595 VYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAE 654
Query: 569 YAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKM 628
AA + +P + ++MLSN+Y+ + W++ AK+RK+MK K + K+ GCSW E+ +++
Sbjct: 655 RAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRV 714
Query: 629 HYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ F + + +++ ++++ + + + GYVPD +S H
Sbjct: 715 NTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLH 755
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 243/460 (52%), Gaps = 14/460 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFD--EMPERNVISWSALISGFSQIGMPE 58
++ +GF NV L+ MY K +++A+ LF E +N + W+A+++G++Q G
Sbjct: 188 VVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGY 247
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
A+ +FR M +E N YT+ ++AC+S G+++HG + +SG N +V + L+
Sbjct: 248 KAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALV 307
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+MY KCG L +A+ + + + + +SW SL+ + + G L++F + I ++
Sbjct: 308 DMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDY 367
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ SVL C V+G++ +H L+ K E K V+ L+++YAK +D A VF +
Sbjct: 368 TFPSVLN-CCVVGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKM 425
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +W++L+ GYAQ E++ +F M +G+ P + + +L A A++ G+
Sbjct: 426 LEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGK 485
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H IK G V N+++ Y+KC L+++ F M DV++W A+I G+ +
Sbjct: 486 QVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNG 545
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSN 413
+++ M+ G P+ T+ +L S ++ G++ + +KPG +
Sbjct: 546 KGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHY 605
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTML 452
+ ++D++ + G+L++A+++ D + K + W ++L
Sbjct: 606 ----ACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLL 641
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 149/506 (29%), Positives = 245/506 (48%), Gaps = 55/506 (10%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF NV + L+ MY K + +A+ + + M + +V+SW++L+ GF + G+ E A
Sbjct: 291 IVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEA 350
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ M ++ + YT+ ++ C + + K +HG + ++G E VSN L++M
Sbjct: 351 LRLFKNMHGRNMKIDDYTFPSVLNCCVV--GSINPKSVHGLIIKTGFENYKLVSNALVDM 408
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A VF+ LE++ ISW SL++ Y Q H LKIF R +GV +F
Sbjct: 409 YAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIV 468
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L ACA L L+ G Q+H K L + + V L+ +YAKC LD A +F ++Q+
Sbjct: 469 ASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQV 528
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+A+I GYAQ GK ++ + M SSG P +TF +L A + GR+
Sbjct: 529 KDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKY 588
Query: 301 HSLIIKM-GFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASC 358
+ K+ G ++D + + L+E+ + D+MD + D W +L L++C
Sbjct: 589 FQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSL----LSAC 644
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
E +EL E NL+ L + +P +
Sbjct: 645 RVHENLELA-----ERAATNLFE----LEPMNAMPYV----------------------- 672
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLV-----SW-------NTMLVGYAQHGLGREALE 466
L +MY+ + ND K+ + SK +V SW NT + G REA E
Sbjct: 673 MLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISD--DRGHPREA-E 729
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVH 492
IY+ + E ++ + ++ +S +H
Sbjct: 730 IYTKIDEIILRIKEAGYVPDMSFSLH 755
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/668 (34%), Positives = 382/668 (57%), Gaps = 14/668 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSR--INDAQKLFDEMPE--RNVISWSALISGFSQIGMP 57
+ SG + N L+ Y R + A +F ++P R+V SW++L++ S+ P
Sbjct: 41 LKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSLLNPLSR-HHP 99
Query: 58 EVALNYFRLMVCC--VLEPNYYTYVGAVSACASRGDARSGKEIHG---RMYRSGLELNSH 112
AL++FR M+ + P+ +++ A +A A A +G H ++ S N
Sbjct: 100 VSALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALACKLPSSCGSNNVF 159
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC--QCGEHVHGLKIFLLSRK 170
VS L+NMY K G +S A+ VFD L RN++SW +++S Y +C E L +L +K
Sbjct: 160 VSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLML-QK 218
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDL 230
+ +EF +VL A +V L +G Q+H LV K L V L+ +YAK E +D
Sbjct: 219 CPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDA 278
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
A RVF + + + WSA+I GYAQ G+A A +F++M SSG P+E TF VL A +D
Sbjct: 279 AMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSD 338
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNA 349
+ + G+Q H L++K+GF + +V + ++D Y+KC + ++ F ++ D DVV W A
Sbjct: 339 MGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTA 398
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I GH+ + + EA+ L M +G P+ T +++L + + A++ GKQ H I+K
Sbjct: 399 MITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCR 458
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
F +G+AL MY+KCG L D+ VF + ++++SWN+++ ++QHG G +AL+++
Sbjct: 459 FSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFE 518
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M+ P+ TFI +LSAC H+GLV+ GW YF +M +D+ + P +DH A +V + +
Sbjct: 519 EMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRA 578
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
GQ + A +FI S I+ +WR +L C++ +D +G YA E+++ ED+SA+I+LS
Sbjct: 579 GQLKEAKDFIDSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLS 638
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMN 649
N+YA W++ +VR +M+ + + KD GCSW EL N++H F + +++ +
Sbjct: 639 NIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWVELYNRVHVFVVGEQQHPEAENINVELI 698
Query: 650 QLSVHLFD 657
+L+ H+ D
Sbjct: 699 RLAKHMKD 706
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 143/429 (33%), Positives = 219/429 (51%), Gaps = 18/429 (4%)
Query: 86 CASRGD--ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC--GLLSSAQFVF---DASL 138
CA+ D R+G+ +HG +SG ++ VSN LI Y LL +A VF A+L
Sbjct: 22 CAASSDRTPRTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAAL 81
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
R+ SW SLL+ + V L F ++S V S S A+ A A + + G
Sbjct: 82 -RDVASWNSLLNPLSR-HHPVSALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAG 139
Query: 197 MQIHSLVFK----CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
H+L K C + FV+ L+N+Y K + A RVF + + +W+A++ G
Sbjct: 140 AVTHALACKLPSSCGSN-NVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSG 198
Query: 253 YAQLGKACEAIDLFVKMFSS-GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
YA + EA +LF M L +E + VL A + + G QLH L++K G
Sbjct: 199 YATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVG 258
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
F V N+++ Y+K E ++ +++ F E + ++W+A+I G+ + A + M
Sbjct: 259 FVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMH 318
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
G P +T+ +LN SD+ A+ GKQTHC +VK GF++ V + SALVDMYAKCG +
Sbjct: 319 SSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIG 378
Query: 432 DARKVFDHL-SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
DA+ F L ++V W M+ G+ Q+G EAL +YS M + I P+ T VL AC
Sbjct: 379 DAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRAC 438
Query: 491 VHIGLVEEG 499
+ ++ G
Sbjct: 439 ACLAALDLG 447
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 1/197 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE-RNVISWSALISGFSQIGMPEV 59
M+ GF V + L+ MY K I DA+ F ++ + +V+ W+A+I+G Q G E
Sbjct: 352 MVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEE 411
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL + M + P+Y T + ACA GK++H ++ + L V L
Sbjct: 412 ALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALST 471
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG L + VF +R+ ISW S++S + Q G L +F + G A +
Sbjct: 472 MYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHIT 531
Query: 180 CASVLGACAVLGNLKVG 196
++L AC+ +G + G
Sbjct: 532 FINLLSACSHMGLVDRG 548
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/662 (32%), Positives = 355/662 (53%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G +V T + L+ MY K ++DA F MPERN +SW A I+G Q L
Sbjct: 176 VKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGL 235
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M L + +Y A +CA+ +G+++H ++ + V ++++Y
Sbjct: 236 ELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVY 295
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K L+ A+ F + +++ + G + + +F +S + S +
Sbjct: 296 AKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLS 355
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
V ACA G Q+H L K + D V +++LY KC+ L A +F ++
Sbjct: 356 GVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK 415
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +W+A+I Q G + I F +M G+ P + T+ VL A A ++ G +H
Sbjct: 416 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 475
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+IK G S FVA+TV+D Y KC +++E+ K D + VVSWNA+++G +
Sbjct: 476 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESE 535
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA + +ML G P+ +T++ +L+ +++ IE GKQ H I+K + I S LV
Sbjct: 536 EAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLV 595
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAKCG + D+ VF+ + ++ VSWN M+ GYA HGLG EAL ++ MQ+ + PN
Sbjct: 596 DMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHA 655
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL AC H+GL ++G YF+ M + + P+++H A +V + + A +FI S
Sbjct: 656 TFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINS 715
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P + + V+W+ LLS CK +D+ + AA +L DP+D+S +I+LSNVYAE+ W +
Sbjct: 716 MPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADV 775
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
++ R+++K+ LKK+ GCSW E+Q++MH F A + +L+E++N L + GY
Sbjct: 776 SRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYE 835
Query: 662 PD 663
PD
Sbjct: 836 PD 837
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/500 (32%), Positives = 271/500 (54%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+ +++N +L Y I+ A LFD MP+ +V+SW+AL+SG+ Q GM + +++ F M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ P+ T+ + +C++ + G ++H ++GLE++ + L++MYGKC L
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A F ERN +SW + ++ Q ++V GL++F+ ++ G+ +S+ S AS +CA
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ L G Q+H+ K D+ V ++++YAK L A R F + + +A
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
++ G + G EA+ LF M S + V+ S V A A+ K G+Q+H L IK G
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F V N VLD Y KC+ L E+ F M + D VSWNA+IA + HY + I
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+ML G P+ +TY ++L + + ++E+G H ++K G S+ + S +VDMY KCG
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 501
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+++A+K+ D + + +VSWN +L G++ + EA + +S M + +KP+ TF VL
Sbjct: 502 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 561
Query: 489 ACVHIGLVEEGWHYFNSMIR 508
C ++ +E G +I+
Sbjct: 562 TCANLATIELGKQIHGQIIK 581
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 139/526 (26%), Positives = 248/526 (47%), Gaps = 41/526 (7%)
Query: 74 PNYYTYVGAVSACASRGD--ARSGKEIHGRMYRSGLELNSHVSNCLINM----------- 120
P T+ +CA G +G+ H RM SG + VSNCL+ M
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 72
Query: 121 --------------------YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH 160
Y G +S+A +FD + + +SW +L+S YCQ G
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 161 GLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLIN 220
+ +F+ + GV+ + A +L +C+ L L +G+Q+H+L K LE D L++
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 192
Query: 221 LYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVT 280
+Y KC LD A F + + +W A I G Q + ++LF++M GL S+ +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
++ + A + GRQLH+ IK FSS V ++D Y+K L ++ + F +
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
H V + NA++ G + + EA+ L + M+ ++ + S + + ++ G+Q
Sbjct: 313 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 372
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
HC +K GFD ++ + +A++D+Y KC L +A +F + K+ VSWN ++ Q+G
Sbjct: 373 VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGH 432
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
+ + ++ M +KP+D T+ VL AC + +E G + +I+ G+ +
Sbjct: 433 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVAS 491
Query: 521 SVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+VV ++ G + ++ ++ I + V W +LSG +K+
Sbjct: 492 TVVDMYCKCGIIDEAQKLHDRIGGQQV----VSWNAILSGFSLNKE 533
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 132/254 (51%), Gaps = 6/254 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + + ++ MY K I++AQKL D + + V+SW+A++SGFS E A
Sbjct: 478 VIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA 537
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+F M+ L+P+++T+ + CA+ GK+IHG++ + + + ++S+ L++M
Sbjct: 538 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 597
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + + VF+ +R+ +SW +++ Y G V L++F +K V + +
Sbjct: 598 YAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATF 657
Query: 181 ASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+VL AC+ +G G + L+ +K + + F M +++ + + A + ++
Sbjct: 658 VAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACM--VDILGRSKGPQEAVKFINS 715
Query: 238 IQL-PDLTAWSALI 250
+ D W L+
Sbjct: 716 MPFQADAVIWKTLL 729
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/662 (32%), Positives = 355/662 (53%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G +V T + L+ MY K ++DA F MPERN +SW A I+G Q L
Sbjct: 176 VKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGL 235
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M L + +Y A +CA+ +G+++H ++ + V ++++Y
Sbjct: 236 ELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVY 295
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K L+ A+ F + +++ + G + + +F +S + S +
Sbjct: 296 AKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLS 355
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
V ACA G Q+H L K + D V +++LY KC+ L A +F ++
Sbjct: 356 GVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK 415
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +W+A+I Q G + I F +M G+ P + T+ VL A A ++ G +H
Sbjct: 416 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 475
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+IK G S FVA+TV+D Y KC +++E+ K D + VVSWNA+++G +
Sbjct: 476 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESE 535
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA + +ML G P+ +T++ +L+ +++ IE GKQ H I+K + I S LV
Sbjct: 536 EAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLV 595
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAKCG + D+ VF+ + ++ VSWN M+ GYA HGLG EAL ++ MQ+ + PN
Sbjct: 596 DMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHA 655
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL AC H+GL ++G YF+ M + + P+++H A +V + + A +FI S
Sbjct: 656 TFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINS 715
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P + + V+W+ LLS CK +D+ + AA +L DP+D+S +I+LSNVYAE+ W +
Sbjct: 716 MPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADV 775
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
++ R+++K+ LKK+ GCSW E+Q++MH F A + +L+E++N L + GY
Sbjct: 776 SRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYE 835
Query: 662 PD 663
PD
Sbjct: 836 PD 837
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/500 (32%), Positives = 271/500 (54%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+ +++N +L Y I+ A LFD MP+ +V+SW+AL+SG+ Q GM + +++ F M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ P+ T+ + +C++ + G ++H ++GLE++ + L++MYGKC L
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A F ERN +SW + ++ Q ++V GL++F+ ++ G+ +S+ S AS +CA
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ L G Q+H+ K D+ V ++++YAK L A R F + + +A
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
++ G + G EA+ LF M S + V+ S V A A+ K G+Q+H L IK G
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F V N VLD Y KC+ L E+ F M + D VSWNA+IA + HY + I
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+ML G P+ +TY ++L + + ++E+G H ++K G S+ + S +VDMY KCG
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 501
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+++A+K+ D + + +VSWN +L G++ + EA + +S M + +KP+ TF VL
Sbjct: 502 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 561
Query: 489 ACVHIGLVEEGWHYFNSMIR 508
C ++ +E G +I+
Sbjct: 562 TCANLATIELGKQIHGQIIK 581
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 249/526 (47%), Gaps = 41/526 (7%)
Query: 74 PNYYTYVGAVSACASRGD--ARSGKEIHGRMYRSGLELNSHVSNCLINM----------- 120
P T+ +CA G +G+ H RM SG N+ VSNCL+ M
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAACAR 72
Query: 121 --------------------YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH 160
Y G +S+A +FD + + +SW +L+S YCQ G
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 161 GLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLIN 220
+ +F+ + GV+ + A +L +C+ L L +G+Q+H+L K LE D L++
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 192
Query: 221 LYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVT 280
+Y KC LD A F + + +W A I G Q + ++LF++M GL S+ +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
++ + A + GRQLH+ IK FSS V ++D Y+K L ++ + F +
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
H V + NA++ G + + EA+ L + M+ ++ + S + + ++ G+Q
Sbjct: 313 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 372
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
HC +K GFD ++ + +A++D+Y KC L +A +F + K+ VSWN ++ Q+G
Sbjct: 373 VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGH 432
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
+ + ++ M +KP+D T+ VL AC + +E G + +I+ G+ +
Sbjct: 433 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVAS 491
Query: 521 SVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+VV ++ G + ++ ++ I + V W +LSG +K+
Sbjct: 492 TVVDMYCKCGIIDEAQKLHDRIGGQQV----VSWNAILSGFSLNKE 533
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 132/254 (51%), Gaps = 6/254 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + + ++ MY K I++AQKL D + + V+SW+A++SGFS E A
Sbjct: 478 VIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA 537
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+F M+ L+P+++T+ + CA+ GK+IHG++ + + + ++S+ L++M
Sbjct: 538 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 597
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + + VF+ +R+ +SW +++ Y G V L++F +K V + +
Sbjct: 598 YAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATF 657
Query: 181 ASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+VL AC+ +G G + L+ +K + + F M +++ + + A + ++
Sbjct: 658 VAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACM--VDILGRSKGPQEAVKFINS 715
Query: 238 IQL-PDLTAWSALI 250
+ D W L+
Sbjct: 716 MPFQADAVIWKTLL 729
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/662 (32%), Positives = 378/662 (57%), Gaps = 11/662 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N I NHL+ MY + + A+ +FD M +RN +SW+A+I+ +Q A+ F M+
Sbjct: 81 NTILSNHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSML 140
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM--YRSGLELNSHVSNCLINMYGKCGL 126
P+ + A+ AC+ GD G+++H + + SG +L V N L+ MY K G
Sbjct: 141 RSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLI--VQNALVTMYSKSGS 198
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA-ISEFSCASVLG 185
+ +F+ +++ ISW S+++ Q G + L+IF GV +EF SV
Sbjct: 199 VGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFR 258
Query: 186 ACAVLGN-LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC+V+ N L+ G QIH + K L+ + + L ++YA+C +LD A +VF I+ PDL
Sbjct: 259 ACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLV 318
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W++LI ++ G EA+ LF +M SGL P +T +L A GR +HS +
Sbjct: 319 SWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYL 378
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K+G V+N++L Y++C ++ F E + DVV+WN+++ + H +
Sbjct: 379 VKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVF 438
Query: 365 ELLKDMLFEGHCPNL--YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
+L L P+L + +N+L+ S+++ E KQ H K G + ++ + L+D
Sbjct: 439 KLFS--LLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLID 496
Query: 423 MYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
YAKCG L+DA K+F+ + + +++ SW++++VGYAQ G +EAL++++ M+ +KPN
Sbjct: 497 TYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHV 556
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+GVL+AC +GLV+EG +Y++ M ++GI P +H + V+ L A G+ A +F+
Sbjct: 557 TFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQ 616
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P EP+ ++W+ LL+ +TH D+ +G+ AAE +L+ DP ++A+++L N+YA + W+E
Sbjct: 617 MPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEF 676
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A+++K M+ ++K G SW +L+ ++ F + + +++ ++ + + + GY+
Sbjct: 677 ARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEIYTMLEVIGLEMVKAGYI 736
Query: 662 PD 663
P+
Sbjct: 737 PE 738
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 119/255 (46%), Gaps = 3/255 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +VI N LL MY + + A +F E +R+V++W+++++ Q E
Sbjct: 378 LVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDV 437
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F L+ + + + +SA A G K++H ++ GL ++ +SN LI+
Sbjct: 438 FKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDT 497
Query: 121 YGKCGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG L A +F+ R+ SW SL+ Y Q G L +F R GV + +
Sbjct: 498 YAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVT 557
Query: 180 CASVLGACAVLGNLKVGMQIHSLVF-KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
VL AC+ +G + G +S++ + + + +++L A+ +L A++ +
Sbjct: 558 FVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQM 617
Query: 239 QL-PDLTAWSALIGG 252
PD+ W L+
Sbjct: 618 PFEPDIIMWKTLLAA 632
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/662 (32%), Positives = 355/662 (53%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G +V T + L+ MY K ++DA F MPERN +SW A I+G Q L
Sbjct: 218 VKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGL 277
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M L + +Y A +CA+ +G+++H ++ + V ++++Y
Sbjct: 278 ELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVY 337
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K L+ A+ F + +++ + G + + +F +S + S +
Sbjct: 338 AKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLS 397
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
V ACA G Q+H L K + D V +++LY KC+ L A +F ++
Sbjct: 398 GVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK 457
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +W+A+I Q G + I F +M G+ P + T+ VL A A ++ G +H
Sbjct: 458 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 517
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+IK G S FVA+TV+D Y KC +++E+ K D + VVSWNA+++G +
Sbjct: 518 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESE 577
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA + +ML G P+ +T++ +L+ +++ IE GKQ H I+K + I S LV
Sbjct: 578 EAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLV 637
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAKCG + D+ VF+ + ++ VSWN M+ GYA HGLG EAL ++ MQ+ + PN
Sbjct: 638 DMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHA 697
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL AC H+GL ++G YF+ M + + P+++H A +V + + A +FI S
Sbjct: 698 TFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINS 757
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P + + V+W+ LLS CK +D+ + AA +L DP+D+S +I+LSNVYAE+ W +
Sbjct: 758 MPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADV 817
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
++ R+++K+ LKK+ GCSW E+Q++MH F A + +L+E++N L + GY
Sbjct: 818 SRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYE 877
Query: 662 PD 663
PD
Sbjct: 878 PD 879
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/500 (32%), Positives = 271/500 (54%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+ +++N +L Y I+ A LFD MP+ +V+SW+AL+SG+ Q GM + +++ F M
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ P+ T+ + +C++ + G ++H ++GLE++ + L++MYGKC L
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A F ERN +SW + ++ Q ++V GL++F+ ++ G+ +S+ S AS +CA
Sbjct: 244 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 303
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ L G Q+H+ K D+ V ++++YAK L A R F + + +A
Sbjct: 304 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 363
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
++ G + G EA+ LF M S + V+ S V A A+ K G+Q+H L IK G
Sbjct: 364 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 423
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F V N VLD Y KC+ L E+ F M + D VSWNA+IA + HY + I
Sbjct: 424 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 483
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+ML G P+ +TY ++L + + ++E+G H ++K G S+ + S +VDMY KCG
Sbjct: 484 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 543
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+++A+K+ D + + +VSWN +L G++ + EA + +S M + +KP+ TF VL
Sbjct: 544 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 603
Query: 489 ACVHIGLVEEGWHYFNSMIR 508
C ++ +E G +I+
Sbjct: 604 TCANLATIELGKQIHGQIIK 623
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/526 (26%), Positives = 248/526 (47%), Gaps = 41/526 (7%)
Query: 74 PNYYTYVGAVSACASRGD--ARSGKEIHGRMYRSGLELNSHVSNCLINM----------- 120
P T+ +CA G +G+ H RM SG + VSNCL+ M
Sbjct: 55 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 114
Query: 121 --------------------YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH 160
Y G +S+A +FD + + +SW +L+S YCQ G
Sbjct: 115 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 174
Query: 161 GLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLIN 220
+ +F+ + GV+ + A +L +C+ L L +G+Q+H+L K LE D L++
Sbjct: 175 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 234
Query: 221 LYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVT 280
+Y KC LD A F + + +W A I G Q + ++LF++M GL S+ +
Sbjct: 235 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 294
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
++ + A + GRQLH+ IK FSS V ++D Y+K L ++ + F +
Sbjct: 295 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 354
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
H V + NA++ G + + EA+ L + M+ ++ + S + + ++ G+Q
Sbjct: 355 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 414
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
HC +K GFD ++ + +A++D+Y KC L +A +F + K+ VSWN ++ Q+G
Sbjct: 415 VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGH 474
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
+ + ++ M +KP+D T+ VL AC + +E G + +I+ G+ +
Sbjct: 475 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVAS 533
Query: 521 SVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+VV ++ G + ++ ++ I + V W +LSG +K+
Sbjct: 534 TVVDMYCKCGIIDEAQKLHDRIGGQQV----VSWNAILSGFSLNKE 575
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 132/254 (51%), Gaps = 6/254 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + + ++ MY K I++AQKL D + + V+SW+A++SGFS E A
Sbjct: 520 VIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA 579
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+F M+ L+P+++T+ + CA+ GK+IHG++ + + + ++S+ L++M
Sbjct: 580 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 639
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + + VF+ +R+ +SW +++ Y G V L++F +K V + +
Sbjct: 640 YAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATF 699
Query: 181 ASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+VL AC+ +G G + L+ +K + + F M +++ + + A + ++
Sbjct: 700 VAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACM--VDILGRSKGPQEAVKFINS 757
Query: 238 IQL-PDLTAWSALI 250
+ D W L+
Sbjct: 758 MPFQADAVIWKTLL 771
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/665 (31%), Positives = 369/665 (55%), Gaps = 1/665 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+GF + + L LMY + +A ++FDE+ + W+ L++ ++ G ++
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F+ M+ +E + YT+ + +S G+++HG + +SG + V N L+ Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
+ SA+ VFD ER+ ISW S+++ Y G GL +F+ SG+ I + SV
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
CA + +G +HS+ K + L+++Y+KC LD A VF + +
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 362
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+++++I GYA+ G A EA+ LF +M G+ P T + VL A + G+++H
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 422
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
I + FV+N ++D Y+KC ++E+ F EM D++SWN +I G+ +C+ EA
Sbjct: 423 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 482
Query: 364 IELLKDMLFEGH-CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
+ L +L E P+ T + +L + + A + G++ H I++ G+ S+ + ++LVD
Sbjct: 483 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 542
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MYAKCG L A +FD ++SK+LVSW M+ GY HG G+EA+ +++ M++ I+ ++ +
Sbjct: 543 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 602
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F+ +L AC H GLV+EGW +FN M + I P ++H A +V + A G +AY FI++
Sbjct: 603 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM 662
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
PI P+ +W LL GC+ H D+ L AEK+ +PE+T +++++N+YAEA W++
Sbjct: 663 PIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVK 722
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
++RK + ++ L+K+ GCSW E++ +++ F + + ++ + ++ + + GY P
Sbjct: 723 RLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSP 782
Query: 663 DPIYS 667
Y+
Sbjct: 783 LTKYA 787
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/526 (28%), Positives = 266/526 (50%), Gaps = 7/526 (1%)
Query: 38 ERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE 97
+R+V + + F + G E A+ L V + + T + CA + GKE
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKL--LCVSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
+ + +G ++S++ + L MY CG L A VFD ++ W L++ + G+
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
+ +F SGV + ++ + V + + L ++ G Q+H + K V
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
L+ Y K +++D A +VF + D+ +W+++I GY G A + + +FV+M SG+
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
T V AD + GR +HS+ +K FS NT+LD YSKC L+ + F
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
EM + VVS+ ++IAG+ GEA++L ++M EG P++YT + +LN + ++
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
GK+ H I + ++ + +AL+DMYAKCG + +A VF + K+++SWNT++ GY++
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 458 HGLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
+ EAL +++ +++E + P++ T VL AC + ++G ++R+ S R
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR- 534
Query: 517 DHIA-SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
H+A S+V ++A G A+ + + V W +++G H
Sbjct: 535 -HVANSLVDMYAKCGALLLAH-MLFDDIASKDLVSWTVMIAGYGMH 578
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 140/465 (30%), Positives = 238/465 (51%), Gaps = 11/465 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF N L+ Y+K R++ A+K+FDEM ER+VISW+++I+G+ G+ E
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ +E + T V + CA G+ +H ++ N L++M
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 340
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L SA+ VF +R+ +S+ S+++ Y + G +K+F + G++ ++
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL CA L G ++H + + L FD FV+ L+++YAKC + A VFS +++
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +W+ +IGGY++ A EA+ LF + P E T + VL A A + GR+
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H I++ G+ S VAN+++D Y+KC L + FD++ D+VSW +IAG+
Sbjct: 521 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 580
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSNV 414
EAI L M G + ++ ++L S ++ G + H C ++P +
Sbjct: 581 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 640
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
I VDM A+ G L A + +++ + W +L G H
Sbjct: 641 CI----VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/652 (33%), Positives = 360/652 (55%), Gaps = 4/652 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL MY K A ++FD +PERN++S+ L+ G + G E A F+ + E
Sbjct: 469 NVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHE 528
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N + + + +H + G + N+ V + LI+ Y CG++S A+ V
Sbjct: 529 VNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRV 588
Query: 134 FDASLERNSISWVSLLSSYCQ--CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
FD + +++++W +++S Y + C E+ L+IF R + ++ F+ SVL A L
Sbjct: 589 FDGIVGKDAVAWTAMVSCYSENDCPENT--LQIFSKMRVAVSKLNPFALTSVLRAAVCLS 646
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
++ +G IH+ K + ++ V L+++YAKC ++ A F + D+ WS +I
Sbjct: 647 SVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMIS 706
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
YAQ + +A +LF++M S + P+E + S VL A A++ G+Q+H+ IK+G S
Sbjct: 707 RYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHES 766
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
FV N ++D Y+KC +E SL+ F + + + VSWN +I G+ S A+ + ++M
Sbjct: 767 ELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMR 826
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
TYS++L + +I Q HC I K F+S+ ++ ++L+D YAKCG +
Sbjct: 827 AASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIR 886
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
DAR++F+ L +LVSWN ++ GYA HG A E++ MM +N IK ND TF+ +LS C
Sbjct: 887 DAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCG 946
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
GLV +G F+SM DHGI P M+H +V L G+ A FI P P+ +VW
Sbjct: 947 STGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVW 1006
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
R LLS C HK++ LGR++AEK+L +P+D + +++LSN+Y+ A D+ A RK M+
Sbjct: 1007 RALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNI 1066
Query: 612 SLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++K+ G SW E++ ++H FS ++ ++ L++ GYVPD
Sbjct: 1067 GVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPD 1118
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 146/507 (28%), Positives = 250/507 (49%), Gaps = 26/507 (5%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSG--LELNSHVSNCLINMYGKCGLLSSAQF 132
+ Y Y + C +RGDAR G+ +HG + RSG L+ +N L+NMY K G SA
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VFD ERN +S+V+L+ + GE +F R G +++F +VL +
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L + +H+ K + + FV LI+ Y+ C + A RVF I D AW+A++
Sbjct: 547 LGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSC 606
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y++ + +F KM + + + VL A + + G+ +H+ +K + +
Sbjct: 607 YSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTE 666
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE-AIELLKDML 371
V +LD Y+KC +E++ F+ + DV+ W+ +I+ + A C+ E A EL M+
Sbjct: 667 RHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRY-AQCNQNEQAFELFIRMM 725
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
PN ++ S++L +++P ++ GKQ H +K G +S + +G+AL+D+YAKC +
Sbjct: 726 RSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDME 785
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
+ ++F L N VSWNT++VGY++ G G AL ++ M+ + T+ VL AC
Sbjct: 786 SSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACA 845
Query: 492 ------HIG----LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
H+G L+E+ ++++ + I D A C R +E +K
Sbjct: 846 STASINHVGQVHCLIEKSTFNSDTIVSNSLI----DSYAKC----GCIRDAREIFETLK- 896
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGR 568
E + V W ++SG H + +
Sbjct: 897 ---ECDLVSWNAIISGYAVHGQAAMAQ 920
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/513 (27%), Positives = 256/513 (49%), Gaps = 10/513 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N + L+ Y ++DA+++FD + ++ ++W+A++S +S+ PE L F
Sbjct: 561 GHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIF 620
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M V + N + + A GK IH ++ + HV L++MY KC
Sbjct: 621 SKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKC 680
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A+ F+ + I W ++S Y QC ++ ++F+ +S V+ +EFS +SVL
Sbjct: 681 GNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVL 740
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA + L +G QIH+ K E + FV LI+LYAKC ++ + +FS+++ +
Sbjct: 741 QACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEV 800
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ +I GY++ G A+ +F +M ++ + ++VT+S VL A A Q+H LI
Sbjct: 801 SWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLI 860
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
K F+S T V+N+++D Y+KC + ++ + F+ + E D+VSWNA+I+G+ A
Sbjct: 861 EKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQ 920
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFDSNVVIGSALVDM 423
EL M N T+ +L++ + G + + G + ++ + +V +
Sbjct: 921 ELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRL 980
Query: 424 YAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQHG---LGREALEIYSMMQENKIKPN 479
+ GRLNDA + D S+ + + W +L H LGR +S + +I+P
Sbjct: 981 LGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGR-----FSAEKVLEIEPQ 1035
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
D T +LS + +F +R+ G+
Sbjct: 1036 DETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGV 1068
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 118/251 (47%), Gaps = 2/251 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G + N L+ +Y K S + + ++F + + N +SW+ +I G+S+ G E AL
Sbjct: 760 IKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAAL 819
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ FR M + TY + ACAS ++H + +S ++ VSN LI+ Y
Sbjct: 820 SVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSY 879
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A+ +F+ E + +SW +++S Y G+ ++F + K+ + ++ +
Sbjct: 880 AKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFV 939
Query: 182 SVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-Q 239
++L C G + G+ + S+ +E ++ L + +L+ A +I
Sbjct: 940 ALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPS 999
Query: 240 LPDLTAWSALI 250
P W AL+
Sbjct: 1000 APSAMVWRALL 1010
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/667 (33%), Positives = 369/667 (55%), Gaps = 10/667 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H ++ L+ MY+ + + D +K+F+ M +RNV++W++L++G+ Q G+ ++ F
Sbjct: 88 HGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFR 147
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + PN +T+ +S AS+G G+ +H + + G V N L+NMY KCGL
Sbjct: 148 MRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGL 207
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ A+ VF R+ +SW +L++ G + L++F SR S ++E + ++V+
Sbjct: 208 VEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINL 267
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF---SNIQLPDL 243
CA L +L + Q+HS V K V L++ Y K +LD A VF S Q ++
Sbjct: 268 CANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQ--NV 325
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+A+I G Q G A LF +M G+ P+++T+S +L V E Q+H+
Sbjct: 326 VSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTIL----TVSEASFPPQIHAQ 381
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+IK + V ++ YSK EE+L F +D+ DVVSW+A++ + + A
Sbjct: 382 VIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGA 441
Query: 364 IELLKDMLFEGHCPNLYTYSNILNI-SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
M G PN +T S+ ++ +S ++ G+Q H +K + + SALV
Sbjct: 442 TNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVS 501
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MYA+ G + +A+ VF+ + ++L+SWN+ML GYAQHG ++AL+++ M+ I + T
Sbjct: 502 MYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLT 561
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F+ V+ C H GLVEEG YF+ M+RD+GI+P MDH A +V L++ G+ I+
Sbjct: 562 FLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGM 621
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
P +WR LL C+ HK++ LG+ AAEK+LS +P D++ +++LSN+Y+ A W E
Sbjct: 622 PFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKD 681
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+VRK+M K ++K+ GCSW +++NK+H+F S + ++ + ++ L GY P
Sbjct: 682 EVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCP 741
Query: 663 DPIYSSH 669
D + H
Sbjct: 742 DTSFVPH 748
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 235/484 (48%), Gaps = 7/484 (1%)
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLINMYGKCGLLSSAQFVFDASL 138
+G + C S D GK++H R G + V L++MY + + VF+ L
Sbjct: 59 LGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGML 118
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
+RN ++W SLL+ Y Q G + + +F R GV + F+ +SVL A G + +G
Sbjct: 119 KRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQH 178
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H+ K FV L+N+YAKC ++ A VF ++ D+ +W+ L+ G G+
Sbjct: 179 VHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGR 238
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
EA+ LF SS M +E T+S V+ A++K RQLHS ++K GF S+ V
Sbjct: 239 DLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTA 298
Query: 319 VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
++D Y+K L+++L F M +VVSW A+I G + + A L M +G P
Sbjct: 299 LMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAP 358
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
N TYS IL +S + Q H ++K ++ +G+AL+ Y+K +A +F
Sbjct: 359 NDLTYSTILTVSE----ASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIF 414
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ K++VSW+ ML YAQ G A + M + +KPN+ T + AC
Sbjct: 415 KMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGV 474
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ F+++ H + +++V ++A +G A + + + + + W +LSG
Sbjct: 475 DLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENA-QCVFERQTDRDLLSWNSMLSG 533
Query: 558 CKTH 561
H
Sbjct: 534 YAQH 537
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 173/322 (53%), Gaps = 2/322 (0%)
Query: 169 RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF-DKFVAMGLINLYAKCEK 227
R+ G + + ++ C + + +G Q+H+L +C + D V L+++Y
Sbjct: 47 RRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHS 106
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ +VF + ++ W++L+ GY Q G + + LF +M + G+ P+ TFS VL
Sbjct: 107 VLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSM 166
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
A G+ +H+ IK G S FV N++++ Y+KC L+EE+ F M+ D+VSW
Sbjct: 167 VASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSW 226
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
N L+AG + + EA++L D TYS ++N+ +++ + +Q H ++K
Sbjct: 227 NTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLK 286
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALE 466
GF S + +AL+D Y K G+L+ A VF +S S+N+VSW M+ G Q+G A
Sbjct: 287 HGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAA 346
Query: 467 IYSMMQENKIKPNDNTFIGVLS 488
++S M+E+ + PND T+ +L+
Sbjct: 347 LFSRMREDGVAPNDLTYSTILT 368
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD-SNVVIGSALVDMYAKCGRLN 431
+G C I+ I +P GKQ H V+ G D ++ +G++LVDMY +
Sbjct: 49 QGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVL 108
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
D RKVF+ + +N+V+W ++L GY Q G+ + + ++ M+ + PN TF VLS
Sbjct: 109 DGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVA 168
Query: 492 HIGLVEEGWHYFNSMIR 508
G+V+ G H I+
Sbjct: 169 SQGMVDLGQHVHAQSIK 185
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/708 (31%), Positives = 371/708 (52%), Gaps = 69/708 (9%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+ +++N +L Y I+ A LFD MP+ +V+SW+AL+SG+ Q GM + +++ F M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ P+ T+ + +C++ + G ++H ++GLE++ + L++MYGKC L
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A F ERN +SW S ++ Q ++V GL++F+ ++ G+ +S+ S AS +CA
Sbjct: 202 DALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ L G Q+H+ K D+ V ++++YAK L A R F LP+ T
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAF--FGLPNHTV--- 316
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK-- 306
+ A+ + + M S + V+ S V A A+ K G+Q+H L IK
Sbjct: 317 ---------ETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSV 367
Query: 307 ---------------------------------------------------MGFSSFTFV 315
+ F +F V
Sbjct: 368 LDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAF--V 425
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
A+TV+D Y KC +++E+ K D + VVSWNA+++G + A + +ML G
Sbjct: 426 ASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGL 485
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+ +T++ +L+ +++ IE GKQ H I+K + I S LVDMYAKCG + D+
Sbjct: 486 KPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLL 545
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
VF+ + ++ VSWN M+ GYA HGLG EAL ++ MQ+ + PN TF+ VL AC H+GL
Sbjct: 546 VFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGL 605
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
++G YF+ M + + P+++H A +V + + A +FI S P + + V+W+ LL
Sbjct: 606 FDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLL 665
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
S CK +D+ + AA +L DP+D+S +I+LSNVYAE+ W + ++ R+++K+ LKK
Sbjct: 666 SICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKK 725
Query: 616 DTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ GCSW E Q++MH F A + +L+E++N L + GY PD
Sbjct: 726 EPGCSWIEAQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPD 773
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 219/505 (43%), Gaps = 70/505 (13%)
Query: 74 PNYYTYVGAVSACASRGD--ARSGKEIHGRMYRSGLELNSHVSNCLINM----------- 120
P T+ +CA G +G+ H RM SG + VSNCL+ M
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 72
Query: 121 --------------------YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH 160
Y G +S+A +FD + + +SW +L+S YCQ G
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 161 GLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLIN 220
+ +F+ + GV+ + A +L +C+ L L +G+Q+H+L K LE D L++
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 192
Query: 221 LYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVT 280
+Y KC LD A F + + +W + I G Q + ++LF++M GL S+ +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
++ + A + GRQLH+ IK FSS V ++D Y+K L ++ + F +
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Query: 341 EHDVVSWNAL-----------------IAGHLASCHY------GEAIELL--KDML-FEG 374
H V + NA+ ++G ++C G+ + L K +L G
Sbjct: 313 NHTVETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDLYG 372
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV-----------IGSALVDM 423
C L I ++ W +D ++ + S +VDM
Sbjct: 373 KCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDM 432
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y KCG +++A+K+ D + + +VSWN +L G++ + A + +S M + +KP+ TF
Sbjct: 433 YCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTF 492
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIR 508
VL C ++ +E G +I+
Sbjct: 493 ATVLDTCANLATIELGKQIHGQIIK 517
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 239/529 (45%), Gaps = 47/529 (8%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G +V T + L+ MY K ++DA F MPERN +SW + I+G Q L
Sbjct: 176 VKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGL 235
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M L + +Y A +CA+ +G+++H ++ + V ++++Y
Sbjct: 236 ELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVY 295
Query: 122 GKCGLLSSAQFVF----DASLE------------RNSISW--VSLLSSYCQCGE---HVH 160
K L+ A+ F + ++E R+SI + VSL + C E +
Sbjct: 296 AKANSLTDARRAFFGLPNHTVETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFP 355
Query: 161 GLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE----------- 209
G ++ L+ KS + + C +++ A + +K + ALE
Sbjct: 356 GQQVHCLAIKSVLDLYG-KCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 414
Query: 210 ------FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
FD FVA ++++Y KC +D A ++ I + +W+A++ G++ ++ A
Sbjct: 415 FNEMLRFDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQ 474
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
F +M GL P TF+ VL A++ G+Q+H IIK ++++T++D Y
Sbjct: 475 KFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMY 534
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+KC + +SL F+++++ D VSWNA+I G+ EA+ + + M E PN T+
Sbjct: 535 AKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFV 594
Query: 384 NILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS- 441
+L S + + G + H + + + +VD+ + +A K + +
Sbjct: 595 AVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPF 654
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK--IKPNDNTFIGVLS 488
+ V W T+L R+ +EI + N + P+D++ +LS
Sbjct: 655 QADAVIWKTLLSICKI----RQDVEIAELAASNVLLLDPDDSSVYILLS 699
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/653 (34%), Positives = 367/653 (56%), Gaps = 12/653 (1%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ-IGMPEVALNYFRLMVCCVLEP 74
L+ MY+K + D + +F+ MP+RNV++W++L++G+ Q +V +FR+ V P
Sbjct: 141 LVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVW-P 199
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
N +T+ +SA AS+G G+ +H + + G V N LINMY KCGL+ A+ VF
Sbjct: 200 NPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVF 259
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
R+ +SW +L++ + L++F SR S +S+ + ++V+ CA L L
Sbjct: 260 RQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLA 319
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP---DLTAWSALIG 251
+ Q+HS V K D V +++ Y+KC +LD A +F + +P ++ +W+A+IG
Sbjct: 320 LARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIF--LLMPGSQNVVSWTAMIG 377
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G Q A LF +M + P+E T+S VL A + Q+H+ IIK +
Sbjct: 378 GCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLP----QIHAQIIKTNYQH 433
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V +L YSK EE+L F +D DVV+W+A+++ + + A + M
Sbjct: 434 APSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMS 493
Query: 372 FEGHCPNLYTYSNILNI-SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
+G PN +T S+ ++ +S I+ G+Q H +K + + +GSALV MYA+ G +
Sbjct: 494 MQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSI 553
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ AR VF+ + ++LVSWN+M+ GYAQHG +EAL+ + M+ I+ + TF+ V+ C
Sbjct: 554 DSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGC 613
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
H GLV+EG YF+SM+ DH ISP M+H + +V L++ G+ I+ P +V
Sbjct: 614 THAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMV 673
Query: 551 WRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
WR LL C+ HK++ LG+ AA+K+L +P+D++ +++LSN+YA A W E +VRK+M
Sbjct: 674 WRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDS 733
Query: 611 KSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
K +KK+ GCSW +++NK+H F + ++ + ++ L GY P+
Sbjct: 734 KKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPN 786
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 259/548 (47%), Gaps = 29/548 (5%)
Query: 29 AQKLFDEMPERNVISWS-----ALIS-GFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGA 82
A++ D MP R+ + S A++ G G E ++ + C ++ + V
Sbjct: 48 ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCGRVQGAAVSRV-- 105
Query: 83 VSACASRGDARSGKEIHGRMYRSGLE-LNSHVSNCLINMYGKCGLLSSAQFVFDASLERN 141
+ C D SG+++H + G + V L++MY KCG + + VF+ +RN
Sbjct: 106 LKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRN 165
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS 201
++W SLL+ Y Q + +F R GV + F+ SVL A A G + +G ++H+
Sbjct: 166 VVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHA 225
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACE 261
K FV LIN+Y+KC ++ A VF ++ D+ +W+ L+ G E
Sbjct: 226 QSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLE 285
Query: 262 AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
A+ LF +S S+ T+S V+ A++K+ RQLHS ++K GF S V ++D
Sbjct: 286 ALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMD 345
Query: 322 FYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
YSKC L+++ F M +VVSW A+I G + + A L M + PN +
Sbjct: 346 AYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEF 405
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
TYS +L S IP + Q H I+K + +G+AL+ Y+K G +A +F +
Sbjct: 406 TYSTVLTAS--IPILL--PQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMI 461
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH-IGLVEEG 499
K++V+W+ ML Y+Q G A ++ M +KPN+ T + AC +++G
Sbjct: 462 DHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQG 521
Query: 500 WHYFNSMIRDHGISPR---MDHI---ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
+ H IS + D I +++V ++A +G A + + + V W
Sbjct: 522 RQF-------HAISIKYRYQDAICVGSALVTMYARKGSIDSA-RIVFERQTDRDLVSWNS 573
Query: 554 LLSGCKTH 561
++SG H
Sbjct: 574 MISGYAQH 581
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 161/317 (50%), Gaps = 4/317 (1%)
Query: 253 YAQLGKA-CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
Y + GK EA+D FV + G + S VL + + + G QLH L +K GF
Sbjct: 74 YGRRGKGRGEALDHFVDVHRCGRVQG-AAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDR 132
Query: 312 FTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
V ++D Y KC +E+ F+ M + +VV+W +L+ G++ + + L M
Sbjct: 133 AEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRM 192
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
EG PN +T++++L+ + A++ G++ H VK G S V + ++L++MY+KCG +
Sbjct: 193 RAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLV 252
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+A+ VF + ++++VSWNT++ G + EAL+++ + + K + +T+ V+ C
Sbjct: 253 EEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLC 312
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
++ + +S + HG + + +++ ++ G+ A+ P N V
Sbjct: 313 ANLKQLALA-RQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVS 371
Query: 551 WRCLLSGCKTHKDLVLG 567
W ++ GC + D+ L
Sbjct: 372 WTAMIGGCIQNADIPLA 388
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 167/366 (45%), Gaps = 12/366 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQIGMPEVALNY 63
GFH + ++ Y K ++DA +F MP +NV+SW+A+I G Q +A
Sbjct: 332 GFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAAL 391
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F M ++PN +TY ++A +IH ++ ++ + V L+ Y K
Sbjct: 392 FSRMREDNVKPNEFTYSTVLTASIP----ILLPQIHAQIIKTNYQHAPSVGTALLASYSK 447
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
G A +F ++ ++W ++LS Y Q G+ +F+ G+ +EF+ +S
Sbjct: 448 LGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSA 507
Query: 184 LGACA-VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+ ACA + G Q H++ K + V L+ +YA+ +D A VF D
Sbjct: 508 IDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRD 567
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-LH 301
L +W+++I GYAQ G + EA+D F +M + G+ TF V+ G+Q
Sbjct: 568 LVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFD 627
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHY 360
S+++ S + ++D YS+ L+E++ + M + W L L +C
Sbjct: 628 SMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTL----LGACRV 683
Query: 361 GEAIEL 366
+ +EL
Sbjct: 684 HKNVEL 689
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/640 (33%), Positives = 348/640 (54%), Gaps = 1/640 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM-VCCVL 72
N L VK + +A+++FD+M +++ ISW+ LISG+ AL F+ M V L
Sbjct: 53 NKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGL 112
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+ + A AC D G+ +HG ++GL + V + L++MY K G + +
Sbjct: 113 RIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRR 172
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VF RN +SW ++++ + G + L F +S V ++ A L ACA G
Sbjct: 173 VFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGA 232
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L G +IH+ K + FVA L +Y KC KL+ +F + + D+ +W+ +I
Sbjct: 233 LNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITT 292
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Q+G+ A+ F++M S + P+E TF+ V+ A++ G QLH+LI+ +G ++
Sbjct: 293 LVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAAS 352
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V N+++ Y+KC L S F EM D+VSW+ +IAG+ H EA ELL M
Sbjct: 353 LSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRM 412
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EG P + +++L+ ++ +E GKQ H ++ G + ++ SAL++MY KCG + +
Sbjct: 413 EGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEE 472
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A ++FD + ++VSW M+ GYA+HG RE ++++ + ++P+ TFIGVLSAC H
Sbjct: 473 ASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSH 532
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
GLV+ G+ YFN+M + + ISP +H ++ L G+ A I++ P + VVW
Sbjct: 533 AGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWS 592
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL C+ H D+ GR AE+IL +P HI L+N+YA W E A +RK+MK K
Sbjct: 593 TLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKG 652
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
+ K+ G SW ++++ + F + QG D++ +++ L+
Sbjct: 653 VIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLA 692
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 252/478 (52%), Gaps = 5/478 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G +V + LL MY K +I + +++F EMP RNV+SW+A+I+G + G + AL
Sbjct: 143 VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEAL 202
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
YF M +E + YT+ A+ ACA G G+EIH + + G +++S V+N L MY
Sbjct: 203 VYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMY 262
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG L +F+ R+ +SW +++++ Q G+ ++ F+ R+S V+ +E++ A
Sbjct: 263 NKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFA 322
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+V+ CA L ++ G Q+H+L+ L V ++ +YAKC +L +S +F +
Sbjct: 323 AVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRR 382
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +WS +I GY+Q G EA +L M G P+E + VL A ++ G+QLH
Sbjct: 383 DIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLH 442
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ ++ +G V + +++ Y KC +EE+ + FD + D+VSW A+I G+ +
Sbjct: 443 AYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSR 502
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSAL 420
E I+L + + G P+ T+ +L+ S ++ G + + K + +
Sbjct: 503 EVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCM 562
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQEN 474
+D+ + GRL+DA + + + ++ V W+T+L HG GR E ++ N
Sbjct: 563 IDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPN 620
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 231/449 (51%), Gaps = 3/449 (0%)
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR-KSG 172
SN + K G L +A+ +FD +++ ISW +L+S Y + L +F R +SG
Sbjct: 52 SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+ I F + AC + ++ G +H K L FV L+++Y K K+
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 171
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
RVF + + ++ +W+A+I G + G EA+ F +M+ S + TF+ L A AD
Sbjct: 172 RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG 231
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
GR++H+ +K GF +FVANT+ Y+KC LE L F++M DVVSW +I
Sbjct: 232 ALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
+ A++ M PN YT++ +++ +++ IEWG+Q H I+ G +
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAA 351
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
++ + ++++ MYAKCG+L + +F ++ +++VSW+T++ GY+Q G EA E+ S M+
Sbjct: 352 SLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMR 411
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
KP + VLSAC ++ ++E G ++ + G+ ++++++++ G
Sbjct: 412 MEGPKPTEFALASVLSACGNMAILEHG-KQLHAYVLSIGLEHTAMVLSALINMYCKCGSI 470
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
A ++ + V W +++G H
Sbjct: 471 EEASRIFDAAE-NDDIVSWTAMINGYAEH 498
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+++ G + + L+ MY K I +A ++FD +++SW+A+I+G+++ G
Sbjct: 445 VLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREV 504
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
++ F + L P+ T++G +SAC+ G G M + + + C+I+
Sbjct: 505 IDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMID 564
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHG 161
+ + G LS A+ + +A R+ + W +LL + C+ VHG
Sbjct: 565 LLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRA-CR----VHG 602
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/626 (32%), Positives = 359/626 (57%), Gaps = 8/626 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL Y + A++L DEMP RN +S++ LI +S+ G+ ++L ++
Sbjct: 47 NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVD 106
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
+ ++Y A++AC+ G R+G+ +H GL VSN L++MY KCG + A+ V
Sbjct: 107 VDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRV 166
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN- 192
FD + ER+ +SW SL+S Y + G +++F + R+ G+ ++ F+ SV+ C+ G+
Sbjct: 167 FDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDG 226
Query: 193 -LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+ + +H V K L+ D F+ +I++YAK L A+ +F ++Q P++ ++ +I
Sbjct: 227 TMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIA 286
Query: 252 GYAQ----LGK--ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
G+ + +GK A EA+ L+ ++ S G+ P+E TFS VL A G+Q+H +I
Sbjct: 287 GFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVI 346
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K F F+ + ++D Y +E+ + F +HD+V+W A+++G + + + +A+
Sbjct: 347 KYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALS 406
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L + L G P+L+T S+++N + + G+Q C K GFD V+G++ V MYA
Sbjct: 407 LFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYA 466
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
+ G ++ A + F + S ++VSW+ ++ +AQHG R+AL + M + K+ PN+ TF+G
Sbjct: 467 RSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLG 526
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
VL+AC H GLV+EG Y+ +M +D+G+SP + H VV L G+ A FI +
Sbjct: 527 VLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFH 586
Query: 546 PNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVR 605
+ V+WR LL+ C+ H+DL G+ A +I+ +P ++++++L N+Y +A +K R
Sbjct: 587 ADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTR 646
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYF 631
+MK++ +KK+ G SW EL+ +H F
Sbjct: 647 DLMKQRGVKKEPGLSWIELKCGVHSF 672
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 229/467 (49%), Gaps = 10/467 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G V N L+ MY K + +A+++FD ER+ +SW++L+SG+ + G E +
Sbjct: 136 ILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMV 195
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARS--GKEIHGRMYRSGLELNSHVSNCLIN 119
F +M + N + + C+ RGD + +HG + ++GL+ + + + +I+
Sbjct: 196 RVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMID 255
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC----GEHV--HGLKIFLLSRKSGV 173
MY K G L A +F + E N + + ++++ +C+ G+ V L ++ + G+
Sbjct: 256 MYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGM 315
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+EF+ +SVL AC + G L+ G QIH V K + D F+ LI+LY ++ R
Sbjct: 316 QPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFR 375
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
F + D+ W+A++ G Q +A+ LF + +GL P T S V+ A A +
Sbjct: 376 CFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAV 435
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G Q+ K GF FT + N+ + Y++ ++ + + F EM+ HDVVSW+A+I+
Sbjct: 436 ARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISC 495
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDS 412
H +A+ +M+ PN T+ +L S ++ G + + + K G
Sbjct: 496 HAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSP 555
Query: 413 NVVIGSALVDMYAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQH 458
+ + +VD+ + GRL DA + + + + V W ++L H
Sbjct: 556 TIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIH 602
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 196/400 (49%), Gaps = 18/400 (4%)
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
+ N L+ Y + G A+ + D RN++S+ L+ +Y + G L+ +R++G
Sbjct: 45 LRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAG 104
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
V + FS A+ L AC+ G+L+ G +H+L L FV+ L+++Y+KC ++ A
Sbjct: 105 VDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEAR 164
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA--- 289
RVF + D +W++L+ GY + G E + +F M G+ + V+ +
Sbjct: 165 RVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRG 224
Query: 290 ----DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
D+ E + H +IK G S F+ + ++D Y+K L E+ F + E +VV
Sbjct: 225 DGTMDIAEAV-----HGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVV 279
Query: 346 SWNALIAGH------LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
+N +IAG + EA+ L ++ G P +T+S++L + +E+GK
Sbjct: 280 MFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGK 339
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
Q H ++K F + IGSAL+D+Y G + D + F ++V+W M+ G Q+
Sbjct: 340 QIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNE 399
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
L +AL ++ +KP+ T V++AC + + G
Sbjct: 400 LHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAG 439
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 197/417 (47%), Gaps = 23/417 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ----IG- 55
+I +G +V + ++ MY K + +A LF + E NV+ ++ +I+GF + IG
Sbjct: 238 VIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGK 297
Query: 56 -MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
+ AL + + ++P +T+ + AC G GK+IHG++ + + + +
Sbjct: 298 EVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIG 357
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
+ LI++Y G + F +S + + ++W +++S Q H L +F S +G+
Sbjct: 358 SALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLK 417
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLAS 232
F+ +SV+ ACA L + G QI K FD+F MG +++YA+ +D A+
Sbjct: 418 PDLFTISSVMNACASLAVARAGEQIQCFATKSG--FDRFTVMGNSCVHMYARSGDVDAAT 475
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD-- 290
R F ++ D+ +WSA+I +AQ G A +A+ F +M + ++P+E+TF VL A +
Sbjct: 476 RRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGG 535
Query: 291 -VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWN 348
V E G R ++ G S V+D + L ++ H D V W
Sbjct: 536 LVDE--GLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWR 593
Query: 349 ALIAGHLASCHYGEAIE---LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
+L LASC +E L+ + + E + +Y + N+ D + +T
Sbjct: 594 SL----LASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTR 646
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/663 (32%), Positives = 363/663 (54%), Gaps = 3/663 (0%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H +++ NH+ Y K S I+ A +LFD+M +RN SW+ LI+G ++ G+ +F
Sbjct: 102 HHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCE 161
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + P+ + Y G + C G +H ++ G ++ VS L+NMY K
Sbjct: 162 MQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQE 221
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ + VF+ E N +SW ++++ + ++ +FL GV + V A
Sbjct: 222 IEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA 281
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN--IQLPDLT 244
+L ++ ++ + ++ + V LI++ +KC L A +F++ I
Sbjct: 282 IGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNA 341
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+A+I GY + G +A++LF KM + + T+ V A A +K G+++H+
Sbjct: 342 PWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARA 401
Query: 305 IKMGFS-SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
IK G ++ ++N V + Y+KC LE+ K F+ M++ D++SW +L+ + + +A
Sbjct: 402 IKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKA 461
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
IE+ +M EG PN +T+S++L +++ +E+G+Q H I K G D + I SALVDM
Sbjct: 462 IEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDM 521
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
YAKCG L DA+KVF+ +S+ + VSW ++ G+AQHG+ +AL+++ M + ++PN TF
Sbjct: 522 YAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTF 581
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ VL AC H GLVEEG YF M + +G+ P M+H A +V L + G A EFI P
Sbjct: 582 LCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMP 641
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
+EPN++VW+ LL C+ H ++ LG AA+KILS E+++ +++LSN Y E+ + +
Sbjct: 642 VEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLS 701
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+R +MKE+ +KK+ GCSW + +H F + ++ + +L + L VPD
Sbjct: 702 LRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPD 761
Query: 664 PIY 666
Y
Sbjct: 762 LSY 764
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 248/483 (51%), Gaps = 9/483 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + LL MY K I D+ K+F+ M E NV+SW+A+I+GF+ + A
Sbjct: 197 IVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDA 256
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M+ + P+ T++G A D KE+ G G++ N+ V LI+M
Sbjct: 257 FDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDM 316
Query: 121 YGKCGLLSSAQFVFDASLE--RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
KCG L A+ +F++ R + W +++S Y + G + L++F ++ + + +
Sbjct: 317 NSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHY 376
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF-VAMGLINLYAKCEKLDLASRVFSN 237
+ SV A A L L +G ++H+ K LE + ++ + N YAKC L+ +VF+
Sbjct: 377 TYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNR 436
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
++ DL +W++L+ Y+Q + +AI++F M + G+ P++ TFS VL + A++ G
Sbjct: 437 MEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYG 496
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+Q+H +I K+G + + ++D Y+KC L ++ K F+ + D VSW A+IAGH
Sbjct: 497 QQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQH 556
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVI 416
+A++L + M+ G PN T+ +L S +E G Q + K G +
Sbjct: 557 GIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEH 616
Query: 417 GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGR-EALEIYSMM 471
+ +VD+ ++ G LNDA + + N + W T+L HG LG A +I S
Sbjct: 617 YACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFK 676
Query: 472 QEN 474
EN
Sbjct: 677 AEN 679
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/663 (32%), Positives = 363/663 (54%), Gaps = 3/663 (0%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H +++ NH+ Y K S I+ A +LFD+M +RN SW+ LI+G ++ G+ +F
Sbjct: 102 HHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCE 161
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + P+ + Y G + C G +H ++ G ++ VS L+NMY K
Sbjct: 162 MQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQE 221
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ + VF+ E N +SW ++++ + ++ +FL GV + V A
Sbjct: 222 IEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA 281
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN--IQLPDLT 244
+L ++ ++ + ++ + V LI++ +KC L A +F++ I
Sbjct: 282 IGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNA 341
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+A+I GY + G +A++LF KM + + T+ V A A +K G+++H+
Sbjct: 342 PWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARA 401
Query: 305 IKMGFS-SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
IK G ++ ++N V + Y+KC LE+ K F+ M++ D++SW +L+ + + +A
Sbjct: 402 IKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKA 461
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
IE+ +M EG PN +T+S++L +++ +E+G+Q H I K G D + I SALVDM
Sbjct: 462 IEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDM 521
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
YAKCG L DA+KVF+ +S+ + VSW ++ G+AQHG+ +AL+++ M + ++PN TF
Sbjct: 522 YAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTF 581
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ VL AC H GLVEEG YF M + +G+ P M+H A +V L + G A EFI P
Sbjct: 582 LCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMP 641
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
+EPN++VW+ LL C+ H ++ LG AA+KILS E+++ +++LSN Y E+ + +
Sbjct: 642 VEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLS 701
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+R +MKE+ +KK+ GCSW + +H F + ++ + +L + L VPD
Sbjct: 702 LRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPD 761
Query: 664 PIY 666
Y
Sbjct: 762 LSY 764
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 248/483 (51%), Gaps = 9/483 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + LL MY K I D+ K+F+ M E NV+SW+A+I+GF+ + A
Sbjct: 197 IVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDA 256
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M+ + P+ T++G A D KE+ G G++ N+ V LI+M
Sbjct: 257 FDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDM 316
Query: 121 YGKCGLLSSAQFVFDASLE--RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
KCG L A+ +F++ R + W +++S Y + G + L++F ++ + + +
Sbjct: 317 NSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHY 376
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF-VAMGLINLYAKCEKLDLASRVFSN 237
+ SV A A L L +G ++H+ K LE + ++ + N YAKC L+ +VF+
Sbjct: 377 TYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNR 436
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
++ DL +W++L+ Y+Q + +AI++F M + G+ P++ TFS VL + A++ G
Sbjct: 437 MEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYG 496
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+Q+H +I K+G + + ++D Y+KC L ++ K F+ + D VSW A+IAGH
Sbjct: 497 QQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQH 556
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVI 416
+A++L + M+ G PN T+ +L S +E G Q + K G +
Sbjct: 557 GIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEH 616
Query: 417 GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGR-EALEIYSMM 471
+ +VD+ ++ G LNDA + + N + W T+L HG LG A +I S
Sbjct: 617 YACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFK 676
Query: 472 QEN 474
EN
Sbjct: 677 AEN 679
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/660 (31%), Positives = 355/660 (53%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V + L+ MY + +A+ FD +PER+ + W+ ++ G + G + A+ F
Sbjct: 171 GLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLF 230
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R M EPN+ T +S CA+ D SG ++H + GLE V+N L+ MY KC
Sbjct: 231 RNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKC 290
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L A +F+ + + ++W ++S Q G V +F ++SG + S+L
Sbjct: 291 QCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLL 350
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A L LK G ++H + + + D F+ L+++Y KC + +A ++ + D+
Sbjct: 351 PALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVV 410
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
S +I GY G + EA+ +F + + P+ VT + VL A + G+Q+H +
Sbjct: 411 IGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYV 470
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
++ + +V + ++D Y+KC L+ S F +M + D V+WN++I+ + EA+
Sbjct: 471 LRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEAL 530
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L + M EG N T S L+ + +PAI +GK+ H +K +++ SAL+DMY
Sbjct: 531 DLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMY 590
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG L A +VF+ + KN VSWN+++ Y HGL +E++ + MQE KP+ TF+
Sbjct: 591 AKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFL 650
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
++SAC H GLVEEG F M + + I+PRM+H A +V L++ G+ +A +FI P
Sbjct: 651 ALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPF 710
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+P+ +W LL C+ H+++ L A++++ DP ++ ++++SN+ A A WD +KV
Sbjct: 711 KPDAGIWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKV 770
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDP 664
R++MK+ + K G SW ++ N H F S + + D++ + L L + GYVP P
Sbjct: 771 RRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREEGYVPRP 830
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 163/560 (29%), Positives = 280/560 (50%), Gaps = 7/560 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVIS---WSALISGFSQIGMPEVALNY 63
H ++ + LL MYV R DA +F +P S W+ LI GF+ G +A+ +
Sbjct: 67 HNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLF 126
Query: 64 FRLMVC--CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M P+ +T V +CA+ G G+ +H GL + +V + L+ MY
Sbjct: 127 YVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMY 186
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
GLL +A+ FD ER+ + W ++ + G+ +++F R SG + + A
Sbjct: 187 ADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLA 246
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
L CA +L G Q+HSL KC LE + VA L+ +YAKC+ LD A R+F +
Sbjct: 247 CFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQD 306
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
DL W+ +I G Q G EA LF M SG P +T +L A D+ G+++H
Sbjct: 307 DLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVH 366
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
I++ + F+ + ++D Y KC + + +D DVV + +I+G++ +
Sbjct: 367 GYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSE 426
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA+++ + +L + PN T +++L + + A+ G+Q H +++ ++ + SAL+
Sbjct: 427 EALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALM 486
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAKCGRL+ + +F +S K+ V+WN+M+ ++Q+G +EAL+++ M IK N+
Sbjct: 487 DMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNI 546
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
T LSAC + + G I+ I + ++++ ++A G A +
Sbjct: 547 TISAALSACASLPAIYYGKEIHGVTIKG-PIKADIFAESALIDMYAKCGNLELALRVFEF 605
Query: 542 SPIEPNKVVWRCLLSGCKTH 561
P + N+V W ++S H
Sbjct: 606 MP-DKNEVSWNSIISAYGAH 624
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 230/433 (53%), Gaps = 1/433 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G P V N LL MY K ++DA +LF+ MP+ ++++W+ +ISG Q G+ A
Sbjct: 269 VKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAF 328
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M P+ T V + A + GKE+HG + R+ + ++ + + L+++Y
Sbjct: 329 GLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIY 388
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + AQ ++DA+ + + +++S Y G L++F + + + + A
Sbjct: 389 FKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIA 448
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SVL CA + L +G QIH V + A E +V L+++YAKC +LDL+ +F +
Sbjct: 449 SVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQK 508
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D W+++I ++Q GK EA+DLF +M G+ + +T S L A A + G+++H
Sbjct: 509 DEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIH 568
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ IK + F + ++D Y+KC LE +L+ F+ M + + VSWN++I+ + A
Sbjct: 569 GVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVK 628
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA-L 420
E++ LL M EG+ P+ T+ +++ + +E G Q C+ K + + A +
Sbjct: 629 ESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACM 688
Query: 421 VDMYAKCGRLNDA 433
VD+Y++ G+L+ A
Sbjct: 689 VDLYSRSGKLDKA 701
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 204/443 (46%), Gaps = 51/443 (11%)
Query: 174 AISEFSCA----SVLGACAVLGNLKVGMQIHS-LVFKCALEFDKFVAM--GLINLYAKCE 226
A+++ S A +VL C +L +G+QIH+ V AL +A+ L+ +Y
Sbjct: 25 AVTDVSSADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLAR 84
Query: 227 KLDLASRVFSNIQLPDLTA-----WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEV-- 279
+ A VFS LP A W+ LI G+ G+ A+ +VKM+S PS
Sbjct: 85 RFRDAVAVFS--ALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAH 142
Query: 280 TFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
T YV+ + A + GR +H +G ++ +V + ++ Y+ LL + FD +
Sbjct: 143 TLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGI 202
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
E D V WN ++ G + + A+ L ++M G PN T + L++ + + G
Sbjct: 203 PERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGA 262
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
Q H VK G + V + + L+ MYAKC L+DA ++F+ + +LV+WN M+ G Q+G
Sbjct: 263 QLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNG 322
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
L EA ++ MQ + +P+ T + +L A + +++G ++R+ ++ + +
Sbjct: 323 LFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRN-CVNMDVFLV 381
Query: 520 ASVVHL-FACR------------------------------GQTRRA---YEFIKSSPIE 545
+++V + F CR G + A + ++ I+
Sbjct: 382 SALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIK 441
Query: 546 PNKVVWRCLLSGCKTHKDLVLGR 568
PN V +L GC + L LG+
Sbjct: 442 PNAVTIASVLPGCASMAALPLGQ 464
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/662 (31%), Positives = 359/662 (54%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G N+ N L+ +Y + +A+++FD + + V++W+ALI+G++Q+G + A
Sbjct: 83 IIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEA 142
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
FR MV LEP+ T++ + AC+S GKE+H ++ +G + + L++M
Sbjct: 143 FALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSM 202
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+ VFD R+ ++ ++ Y + G+ ++F ++ G+ ++ S
Sbjct: 203 YVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISF 262
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L C L G +H+ L D VA LI +Y C ++ A RVF N+++
Sbjct: 263 LSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKV 322
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+ +I GYA+ G +A LF M G+ P +T+ +++ A A R++
Sbjct: 323 RDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREI 382
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS + GF + V+ ++ Y+KC ++++ + FD M DVVSW+A+I ++ + +
Sbjct: 383 HSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYG 442
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA E M P+ TY N+LN + A++ G + + +K S+V +G+AL
Sbjct: 443 TEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNAL 502
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ M AK G + AR +FD + +++++WN M+ GY+ HG REAL ++ M + + +PN
Sbjct: 503 IIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNS 562
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+GVLSAC G V+EG +F ++ GI P + +V L G+ A IK
Sbjct: 563 VTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIK 622
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
S P++P +W LL C+ H +L + AAE+ L DP D + ++ LS++YA A MW+
Sbjct: 623 SMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWEN 682
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
AKVRK+M+ + ++K+ GC+W E+ K+H F + +++ + +L + GY
Sbjct: 683 VAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGY 742
Query: 661 VP 662
+P
Sbjct: 743 IP 744
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 260/501 (51%), Gaps = 8/501 (1%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TYV C DA GK++ + + G +LN + N LI +Y CG ++ A+ +FD+
Sbjct: 59 TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+ ++W +L++ Y Q G +F G+ S + SVL AC+ L G
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGK 178
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
++H+ V D + L+++Y K +D A +VF + + D++ ++ ++GGYA+ G
Sbjct: 179 EVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSG 238
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+A +LF +M GL P++++F +L + G+ +H+ + G VA
Sbjct: 239 DWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVAT 298
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
+++ Y+ C +E + + FD M DVVSW +I G+ + + +A L M EG P
Sbjct: 299 SLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQP 358
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ TY +I+N + + ++ H + GF +++++ +ALV MYAKCG + DAR+VF
Sbjct: 359 DRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVF 418
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D + +++VSW+ M+ Y ++G G EA E + +M+ + I+P+ T+I +L+AC H+G ++
Sbjct: 419 DAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALD 478
Query: 498 EGWHYFNSMIRDHGISPRMDHIA---SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
G + I+ +S H+ +++ + A G RA +I + + + + W +
Sbjct: 479 VGMEIYTQAIKADLVS----HVPLGNALIIMNAKHGSVERA-RYIFDTMVRRDVITWNAM 533
Query: 555 LSGCKTHKDLVLGRYAAEKIL 575
+ G H + Y +++L
Sbjct: 534 IGGYSLHGNAREALYLFDRML 554
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 141/258 (54%), Gaps = 5/258 (1%)
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
R F ++QLP +A + + A D+ ++ G T+ + +++
Sbjct: 17 RWFGSLQLPVPSARF-----RSTFTRRVGANDVLQRLGEGGNHIDSRTYVKLFQRCTELR 71
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
+ G+Q+ II+ G + NT++ YS C + E+ + FD ++ VV+WNALIA
Sbjct: 72 DAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIA 131
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
G+ H EA L + M+ EG P++ T+ ++L+ S + WGK+ H +V GF S
Sbjct: 132 GYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVS 191
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+ IG+ALV MY K G ++DAR+VFD L +++ ++N M+ GYA+ G +A E++ MQ
Sbjct: 192 DFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQ 251
Query: 473 ENKIKPNDNTFIGVLSAC 490
+ +KPN +F+ +L C
Sbjct: 252 QVGLKPNKISFLSILDGC 269
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/662 (33%), Positives = 374/662 (56%), Gaps = 5/662 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I++G + L+ MYV + +K+FD++ V W+ L+S +++IG +
Sbjct: 395 IISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRES 454
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F+ M + N YT+ + A+ G + K +HG + + G N+ V N LI
Sbjct: 455 VSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAA 514
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + SA +FD E + +SW S+++ G +GL+IF+ GV + +
Sbjct: 515 YFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTL 574
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A A +GNL +G +H K + + L+++Y+KC L+ A+ VF +
Sbjct: 575 VSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGD 634
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W++ I Y + G +AI LF +M S G+ P T + ++ A A GR +
Sbjct: 635 TTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV 694
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS +IK G S V N +++ Y+KC +EE+ F ++ D+VSWN +I G+ +
Sbjct: 695 HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLP 754
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+EL DM + P+ T + +L + + A++ G++ H I++ G+ S++ + AL
Sbjct: 755 NEALELFLDMQKQFK-PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACAL 813
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAKCG L A+ +FD + K+L+SW M+ GY HG G EA+ ++ M+ I+P++
Sbjct: 814 VDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDE 873
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
++F +L+AC H GL+ EGW +FNSM + G+ P+++H A VV L A G +AY+FI+
Sbjct: 874 SSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIE 933
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
S PI+P+ +W LLSGC+ H D+ L AE I +P++T +++L+NVYAEA W+E
Sbjct: 934 SMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEE 993
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYF--STSRFAQFQGIDLHEVMNQLSVHLFDG 658
K+RK M+++ K++ GCSW E+ K + F S+ Q + ID+ ++ +L++ + +
Sbjct: 994 VKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDV--LLRKLTMQMQNE 1051
Query: 659 GY 660
Y
Sbjct: 1052 DY 1053
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 274/537 (51%), Gaps = 8/537 (1%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
+Y + CA + GK +H + +G+ ++ + L+ MY CG L + +FD
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI 430
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+ W L+S Y + G + +F +K GV + ++ VL A LG +K
Sbjct: 431 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 490
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
++H V K + V LI Y K ++ A +F + PD+ +W+++I G G
Sbjct: 491 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 550
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+ +++F++M G+ T VL A+A++ GR LH +K FS +N
Sbjct: 551 FSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSN 610
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
T+LD YSKC L + + F +M + +VSW + IA ++ Y +AI L +M +G P
Sbjct: 611 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRP 670
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
++YT ++I++ + +++ G+ H ++K G SN+ + +AL++MYAKCG + +AR VF
Sbjct: 671 DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVF 730
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ K++VSWNTM+ GY+Q+ L EALE++ MQ+ + KP+D T VL AC + ++
Sbjct: 731 SKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALD 789
Query: 498 EGWHYFNSMIRDHGISPRMDHIA-SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+G ++R S H+A ++V ++A G A P + + + W +++
Sbjct: 790 KGREIHGHILRRGYFSDL--HVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTVMIA 846
Query: 557 GCKTH--KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
G H + + + +I +P+++S ++L N + + + +E K M+ +
Sbjct: 847 GYGMHGFGNEAISTFNEMRIAGIEPDESSFSVIL-NACSHSGLLNEGWKFFNSMRNE 902
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 213/409 (52%), Gaps = 4/409 (0%)
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
++ +C+ G+ + +++ S+ + ++ + SVL CA +L+ G ++HS++ +
Sbjct: 343 INKFCEMGDLRNAIELLTKSKSYELGLNSY--CSVLQLCAEKKSLEDGKRVHSVIISNGI 400
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
D+ + L+ +Y C L ++F I + W+ L+ YA++G E++ LF K
Sbjct: 401 SIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKK 460
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M G++ + TF+ VL FA + + +++H ++K+GF S T V N+++ Y K
Sbjct: 461 MQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGG 520
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+E + FDE+ E DVVSWN++I G + + G +E+ ML G +L T ++L
Sbjct: 521 VESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVA 580
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
++I + G+ H VK F VV + L+DMY+KCG LN A +VF + +VSW
Sbjct: 581 WANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSW 640
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+ + Y + GL +A+ ++ MQ ++P+ T ++ AC +++G + +I+
Sbjct: 641 TSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK 700
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ G+ + ++++++A G A P++ + V W ++ G
Sbjct: 701 N-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG 747
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/675 (33%), Positives = 385/675 (57%), Gaps = 14/675 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SGF ++ + L+ + K I A+ +F +M RNV+S + LI G + E A+
Sbjct: 313 SGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVEL 372
Query: 64 FRLMVCCV-LEPNYYTYVGAVSACAS----RGDARSGKEIHGRMYRSGLELNSHVS--NC 116
F M V L PN Y + ++A R G E+H + RSGL LN+ ++ N
Sbjct: 373 FMEMKDSVELNPNSYMII--LTAFPEFHVLENGKRKGSEVHAFLIRSGL-LNAQIAIGNG 429
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
LINMY KCG ++ A VF ++S++W S+++ Q + + +K F R++ + S
Sbjct: 430 LINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPS 489
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
F+ S L +CA LG + VG Q+H K L+ D V+ L+ LY +C + + FS
Sbjct: 490 NFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFS 549
Query: 237 NIQLPDLTAWSALIGGYAQLGKA-CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ D +W++LIG A + EA++ F+ M +G P+ VTF +L A + +
Sbjct: 550 LMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHE 609
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGH 354
G+Q+H+L++K ++ T + N +L Y KC + F M D D VSWN++I+G+
Sbjct: 610 LGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGY 669
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ + +A++++ M+ +G + +T++ +L+ + + +E G + H C V+ +S++
Sbjct: 670 IHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDI 729
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
VIGSALVDMYAKCGR++ A + F+ + ++NL SWN+M+ GYA+HG G ++L++++ M+
Sbjct: 730 VIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQ 789
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
P+ TF+GVLSAC H GLV EG+ +F+SM +G++PRM+H + +V L G+ +
Sbjct: 790 GPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNK 849
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
+F+ P++PN ++WR +L C ++ LGR AAE +L +P + +I+LSN+Y
Sbjct: 850 MEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMY 909
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
A WD+ AK R M++ +KK+ GCSW +++ +H F + + ++E + +L+
Sbjct: 910 ASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELN 969
Query: 653 VHLFDGGYVPDPIYS 667
+ GY+P+ ++
Sbjct: 970 GKMRLAGYIPETRFA 984
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 269/515 (52%), Gaps = 18/515 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +GF ++ N L+ +Y + + +K+FDEMP RN++SWS LISG+++ MP A
Sbjct: 99 LFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEA 158
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGD--ARSGKEIHGRMYRSGLELNSHVSNCLI 118
FR MV PN+Y + + AC G+ + G +IHG M ++ + SN LI
Sbjct: 159 CELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLI 218
Query: 119 NMYGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK----SGV 173
+MYG G++ A+ FD+ RN +S S++S YCQ G+ V IF +K G+
Sbjct: 219 SMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGL 278
Query: 174 AISEFSCASVLGACAVLGN--LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
+E++ S++ A L N L + Q+ + V K D +V L++ +AK + A
Sbjct: 279 KPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYA 338
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS-GLMPSEVTFSYVLGAFAD 290
+F + ++ + + LI G + + EA++LF++M S L P+ ++ +L AF +
Sbjct: 339 KNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPN--SYMIILTAFPE 396
Query: 291 VKETIGGR----QLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
G+ ++H+ +I+ G ++ + N +++ Y+KC + ++ F MD D V
Sbjct: 397 FHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSV 456
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
+WN++I G + + EA++ ++M P+ +T + L+ + + I G+Q HC
Sbjct: 457 TWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEG 516
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR-EA 464
+K G D +V + +AL+ +Y +CG + + +K F + + VSWN+++ A EA
Sbjct: 517 LKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEA 576
Query: 465 LEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+E + +M PN TFI +L+A + L E G
Sbjct: 577 VESFLVMMRAGWDPNRVTFITILAAVSSLSLHELG 611
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 214/423 (50%), Gaps = 17/423 (4%)
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
++ +E+H +++++G + + N LIN+Y + G L S + VFD RN +SW L+S
Sbjct: 89 SKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISG 148
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN--LKVGMQIHSLVFKCALE 209
Y + ++F G + ++ SV+ AC G LK GMQIH L+ K
Sbjct: 149 YTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYV 208
Query: 210 FDKFVAMGLINLYAKCEKL-DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
D + LI++Y + D A R F +I +L + +++I Y Q G A A D+F
Sbjct: 209 NDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFST 268
Query: 269 M----FSSGLMPSEVTFSYVLGAFADVKET--IGGRQLHSLIIKMGFSSFTFVANTVLDF 322
M GL P+E TF ++ A + + + QL + + K GF +V + ++
Sbjct: 269 MQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSG 328
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYT 381
++K + + F +M +VVS N LI G + EA+EL +M PN +
Sbjct: 329 FAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPN--S 386
Query: 382 YSNILNISSDIPAIEWGK----QTHCCIVKPG-FDSNVVIGSALVDMYAKCGRLNDARKV 436
Y IL + +E GK + H +++ G ++ + IG+ L++MYAKCG +NDA V
Sbjct: 387 YMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVV 446
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
F + +K+ V+WN+M+ G Q+ EA++ + M+ ++ P++ T I LS+C +G +
Sbjct: 447 FRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWI 506
Query: 497 EEG 499
G
Sbjct: 507 SVG 509
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/602 (33%), Positives = 347/602 (57%), Gaps = 13/602 (2%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+E +YY + C R A + IHG + ++G + V L+N+Y KCG++ SA
Sbjct: 62 IESSYY--FPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAH 119
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD RN +W +LL+ Y Q + L++F+ ++G S ++ VL AC+ L
Sbjct: 120 KVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQ 179
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+++ G Q+H+ + K ++FD + L + Y+K +L+ A + F I+ D+ +W+++I
Sbjct: 180 SIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVIS 239
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G+A ++ F+ M S G+ P+E T + VL A + G Q+HSL IK+G+ S
Sbjct: 240 SCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGS 299
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE--------- 362
+ N+++ Y KC L E+ K F+ M+ ++V+WNA+IAGH E
Sbjct: 300 SILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSG 359
Query: 363 --AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A+ + + + G P+L+T+S++L++ S++ A+E G+Q H I+K G ++VV+G+AL
Sbjct: 360 STALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTAL 419
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V MY KCG ++ A K F + S+ ++SW +M+ G+A+HGL ++AL+++ M+ IKPN
Sbjct: 420 VSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQ 479
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+GVLSAC H GL +E +YF M + + I P MDH A ++ ++ G+ A++ +
Sbjct: 480 VTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVH 539
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
EPN+ +W L++GC++H LG YAAE++L P+D ++ L N++ A W +
Sbjct: 540 KMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKD 599
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
+KVRK+MKE+ + K SW ++ K++ F + + Q +++++++ + + GY
Sbjct: 600 VSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGY 659
Query: 661 VP 662
P
Sbjct: 660 EP 661
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 148/515 (28%), Positives = 253/515 (49%), Gaps = 30/515 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GFH ++ L+ +Y K + A K+FD +P RNV +W+ L++G+ Q P +A
Sbjct: 90 IVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLA 149
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ P+ YT ++AC+S GK++H + + ++ ++ + N L +
Sbjct: 150 LQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSF 209
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K L A F E++ ISW S++SS C G+ L F+ G+ +E++
Sbjct: 210 YSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTL 269
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL AC V+ L +G QIHSL K + ++ LY KC L A ++F ++
Sbjct: 270 TSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMET 329
Query: 241 PDLTAWSALIGGYAQLGKACE-----------AIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
+L W+A+I G+A++ E A+ +F K++ SG+ P TFS VL +
Sbjct: 330 LNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCS 389
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
++ G Q+H IIK G + V ++ Y+KC ++++ K F EM ++SW +
Sbjct: 390 NLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTS 449
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG--------KQT 401
+I G +A++L +DM G PN T+ +L+ S + KQ
Sbjct: 450 MITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQY 509
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGL 460
+ +KP D + L+DMY + GR+ +A V ++ N W+ ++ G H
Sbjct: 510 N---IKPVMDH----FACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSH-- 560
Query: 461 GREALEIYSMMQENKIKPND-NTFIGVLSACVHIG 494
G+ L Y+ Q K+KP D T++ +L+ + G
Sbjct: 561 GKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAG 595
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/602 (33%), Positives = 347/602 (57%), Gaps = 13/602 (2%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+E +YY + C R A + IHG + ++G + V L+N+Y KCG++ SA
Sbjct: 56 IESSYY--FPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAH 113
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD RN +W +LL+ Y Q + L++F+ ++G S ++ VL AC+ L
Sbjct: 114 KVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQ 173
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+++ G Q+H+ + K ++FD + L + Y+K +L+ A + F I+ D+ +W+++I
Sbjct: 174 SIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVIS 233
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G+A ++ F+ M S G+ P+E T + VL A + G Q+HSL IK+G+ S
Sbjct: 234 SCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGS 293
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE--------- 362
+ N+++ Y KC L E+ K F+ M+ ++V+WNA+IAGH E
Sbjct: 294 SILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSG 353
Query: 363 --AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A+ + + + G P+L+T+S++L++ S++ A+E G+Q H I+K G ++VV+G+AL
Sbjct: 354 STALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTAL 413
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V MY KCG ++ A K F + S+ ++SW +M+ G+A+HGL ++AL+++ M+ IKPN
Sbjct: 414 VSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQ 473
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+GVLSAC H GL +E +YF M + + I P MDH A ++ ++ G+ A++ +
Sbjct: 474 VTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVH 533
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
EPN+ +W L++GC++H LG YAAE++L P+D ++ L N++ A W +
Sbjct: 534 KMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKD 593
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
+KVRK+MKE+ + K SW ++ K++ F + + Q +++++++ + + GY
Sbjct: 594 VSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGY 653
Query: 661 VP 662
P
Sbjct: 654 EP 655
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 148/515 (28%), Positives = 253/515 (49%), Gaps = 30/515 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GFH ++ L+ +Y K + A K+FD +P RNV +W+ L++G+ Q P +A
Sbjct: 84 IVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLA 143
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ P+ YT ++AC+S GK++H + + ++ ++ + N L +
Sbjct: 144 LQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSF 203
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K L A F E++ ISW S++SS C G+ L F+ G+ +E++
Sbjct: 204 YSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTL 263
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL AC V+ L +G QIHSL K + ++ LY KC L A ++F ++
Sbjct: 264 TSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMET 323
Query: 241 PDLTAWSALIGGYAQLGKACE-----------AIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
+L W+A+I G+A++ E A+ +F K++ SG+ P TFS VL +
Sbjct: 324 LNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCS 383
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
++ G Q+H IIK G + V ++ Y+KC ++++ K F EM ++SW +
Sbjct: 384 NLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTS 443
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG--------KQT 401
+I G +A++L +DM G PN T+ +L+ S + KQ
Sbjct: 444 MITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQY 503
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGL 460
+ +KP D + L+DMY + GR+ +A V ++ N W+ ++ G H
Sbjct: 504 N---IKPVMDH----FACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSH-- 554
Query: 461 GREALEIYSMMQENKIKPND-NTFIGVLSACVHIG 494
G+ L Y+ Q K+KP D T++ +L+ + G
Sbjct: 555 GKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAG 589
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/687 (33%), Positives = 372/687 (54%), Gaps = 46/687 (6%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL-NYFRL----------- 66
+Y K A+KL + E +++SWSALISG+ Q G E AL Y+ +
Sbjct: 91 LYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFT 150
Query: 67 ----------------------------MVCCVLEPNYYTYVGAVSACASRGDARSGKEI 98
M+ + PN ++ ++ACA D G ++
Sbjct: 151 FSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKV 210
Query: 99 HGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
HG + + G + + +N L++MY K G +A VF + + +SW ++++ ++
Sbjct: 211 HGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKN 270
Query: 159 VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
LK+ VA S F+ +S L ACA +G +K+G Q+HS + K +E D FV +GL
Sbjct: 271 DLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGL 330
Query: 219 INLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE 278
I++Y+KC L A VF + D+ W+++I GY+ G EA+ LF M+ GL ++
Sbjct: 331 IDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQ 390
Query: 279 VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE 338
T S +L + A + Q+H++ IK G+ +VAN++LD Y KC LLE++ K F+
Sbjct: 391 TTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEV 450
Query: 339 MDEHDVVSWNALIAGHLASCHYG---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
D+V++ ++I A YG EA+++ M P+ + +S++ N +++ A
Sbjct: 451 CPAEDLVAYTSMIT---AYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAY 507
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
E GKQ H ++K G S+V G++LV+MYAKCG ++DA +F+ +S + +VSW+ M+ G
Sbjct: 508 EQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGL 567
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
AQHG GR+AL+++ M +N I PN T + VLSAC H GLV E +F M + GI+P
Sbjct: 568 AQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPT 627
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL 575
+H A +V + G+ A +K P + + VW LL + HK++ LGR+AAE +L
Sbjct: 628 QEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLL 687
Query: 576 STDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSR 635
+ +PE + HI+L+N+YA MWD AKVR+ MK +KK+ G SW EL++K++ F
Sbjct: 688 TLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGD 747
Query: 636 FAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+ + +++ ++ L L GYVP
Sbjct: 748 RSHPRSKEIYVKLDDLRERLTSAGYVP 774
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 148/450 (32%), Positives = 230/450 (51%), Gaps = 45/450 (10%)
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
D SG IH R+ R GL + +N+Y KC A+ + S E + +SW +L+S
Sbjct: 65 DVSSGMAIHARIIRLGLLGLRNRL---VNLYSKCQCFRVARKLVIDSSEPDLVSWSALIS 121
Query: 151 SYCQCGEHVHGL----KIFLLSRK------------------------------------ 170
Y Q G L +++LL K
Sbjct: 122 GYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMIS 181
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDL 230
+G++ +EFS ++VL ACA L + GM++H + K + D F A L+++YAK +
Sbjct: 182 TGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEA 241
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
A VF I PD+ +W+A+I G K A+ L KM S + PS T S L A A
Sbjct: 242 AIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAA 301
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ GRQLHS ++KM +FV ++D YSKC LL+++ FD M DV+ WN++
Sbjct: 302 IGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSI 361
Query: 351 IAGHLASCHYG-EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
I+G+ ++C Y EA+ L +M EG N T S IL ++ A + +Q H +K G
Sbjct: 362 ISGY-SNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSG 420
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ + + ++L+D Y KC L DA KVF+ +++LV++ +M+ Y+Q+GLG EAL++Y
Sbjct: 421 YQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYL 480
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
MQ+ IKP+ F + +AC ++ E+G
Sbjct: 481 RMQDRDIKPDAFIFSSLFNACANLSAYEQG 510
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 214/458 (46%), Gaps = 74/458 (16%)
Query: 219 INLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ----------------------- 255
+NLY+KC+ +A ++ + PDL +WSALI GY Q
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 256 -----------------LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
LGK + L +M S+G+ P+E + S VL A A +++ G
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H +IK+G+ S F AN +LD Y+K E ++ F E+ + D+VSWNA+IAG +
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
A++LL M P+++T S+ L + I ++ G+Q H ++K + + +G
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+DMY+KCG L DAR VFD + K+++ WN+++ GY+ G EA+ +++ M + ++
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388
Query: 479 NDNTFIGVLSAC-----------VHIGLVEEGWHY----FNSMIRDHG------------ 511
N T +L + VH ++ G+ Y NS++ +G
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF 448
Query: 512 -ISPRMDHIA--SVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
+ P D +A S++ ++ G + + Y ++ I+P+ ++ L + C
Sbjct: 449 EVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYE 508
Query: 566 LGRYAAEKILSTD-PEDTSAHIMLSNVYAEANMWDETA 602
G+ +L D A L N+YA+ D+ +
Sbjct: 509 QGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDAS 546
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 45/317 (14%)
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
+ +L F K+ G +H+ II+ + N +++ YSKC+ + K +
Sbjct: 53 YPKLLLQFTASKDVSSGMAIHARIIR---LGLLGLRNRLVNLYSKCQCFRVARKLVIDSS 109
Query: 341 EHDVVSWNALIAGHLASCHYGEA------------------------------------- 363
E D+VSW+ALI+G++ + EA
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 364 ---IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ L+ +M+ G PN ++ S +LN + + +G + H ++K G+DS+ +AL
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMYAK G A VF + ++VSWN ++ G H AL++ M ++ P+
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
T L AC IGLV+ G +++++ + P ++ +++ G + A
Sbjct: 290 FTLSSALKACAAIGLVKLGRQLHSALMK-MDMEPDSFVGVGLIDMYSKCGLLQDARMVFD 348
Query: 541 SSPIEPNKVVWRCLLSG 557
P + + +VW ++SG
Sbjct: 349 LMPXK-DVIVWNSIISG 364
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/656 (32%), Positives = 369/656 (56%), Gaps = 6/656 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY+K + + ++F+ MP++NV++W++L++G + M + F M + PN
Sbjct: 141 LVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPN 200
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
+T+ +SA AS+G G+ +H + + G + V N L+NMY KCGL+ A+ VF+
Sbjct: 201 PFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFN 260
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
R+ +SW +L++ + L++F SR + +++ + A+V+ CA L L +
Sbjct: 261 WMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLAL 320
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS-NIQLPDLTAWSALIGGYA 254
Q+HS V K V L + Y+KC +L A +FS ++ +W+A+I G
Sbjct: 321 ARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCI 380
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q G A+ LF +M +MP+E T+S +L A +I Q+H+ +IK + F
Sbjct: 381 QNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA----SLSILPPQIHAQVIKTNYQHIPF 436
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V +L YSK E++L F +++ DVV+W+A+++ H + A L M +G
Sbjct: 437 VGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQG 496
Query: 375 HCPNLYTYSNILNISSDIPA-IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN +T S++++ + A ++ G+Q H +K + + + SALV MY++ G ++ A
Sbjct: 497 IKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA 556
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+ VF+ + ++LVSWN+M+ GYAQHG +A+E + M+ + I+ + TF+ V+ C H
Sbjct: 557 QIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHN 616
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLV EG YF+SM+RDH I+P M+H A +V L++ G+ I+ P +VWR
Sbjct: 617 GLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRT 676
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL C+ HK++ LG+++A+K+LS +P D+S +++LSN+YA A W E +VRK+M + +
Sbjct: 677 LLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKV 736
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
KK+ GCSW +++NK+H F + +++ + + L GY P+ + H
Sbjct: 737 KKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLH 792
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 197/368 (53%), Gaps = 5/368 (1%)
Query: 130 AQFVFDASLERNS-ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A++ D R++ + +L Y + G + L F ++R+ GV + + + VL AC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVA-MGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ + +G Q+H L KC + + A L+++Y KC + VF + ++ W+
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+L+ G A E + LF +M + G+ P+ TF+ VL A A G+++H+ +K
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKF 230
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG-HLASCHYGEAIEL 366
G S FV N++++ Y+KC L+E++ F+ M+ D+VSWN L+AG L C EA++L
Sbjct: 231 GCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECEL-EALQL 289
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+ TY+ ++ + +++ + +Q H C++K GF + +AL D Y+K
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSK 349
Query: 427 CGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
CG L DA +F + S+N+VSW ++ G Q+G A+ ++S M+E+++ PN+ T+
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSA 409
Query: 486 VLSACVHI 493
+L A + I
Sbjct: 410 MLKASLSI 417
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 221/453 (48%), Gaps = 10/453 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV-ALNY 63
G +V N L+ MY K + DA+ +F+ M R+++SW+ L++G Q+ E+ AL
Sbjct: 231 GCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL-QLNECELEALQL 289
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F + + TY + CA+ +++H + + G L +V L + Y K
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSK 349
Query: 124 CGLLSSAQFVFDASL-ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
CG L+ A +F + RN +SW +++S Q G+ + +F R+ V +EF+ ++
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSA 409
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L A + + QIH+ V K + FV L+ Y+K + A +F I+ D
Sbjct: 410 MLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKD 465
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQLH 301
+ AWSA++ +AQ G A LF KM G+ P+E T S V+ A A + GRQ H
Sbjct: 466 VVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFH 525
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
++ IK + V++ ++ YS+ ++ + F+ + D+VSWN++I+G+ +
Sbjct: 526 AISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSM 585
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSAL 420
+AIE + M G + T+ ++ + + G+Q +V+ + + + +
Sbjct: 586 KAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACM 645
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
VD+Y++ G+L++ + + + W T+L
Sbjct: 646 VDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLL 678
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 160/316 (50%), Gaps = 2/316 (0%)
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
YA+ G E +D F G++ T S VL A V + + G QLH L +K G
Sbjct: 74 YARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRG 133
Query: 313 TFVANTVL-DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
A T L D Y KC + E ++ F+ M + +VV+W +L+ G + + E + L M
Sbjct: 134 EVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMR 193
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
EG PN +T++++L+ + A++ G++ H VK G S+V + ++L++MYAKCG +
Sbjct: 194 AEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVE 253
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
DA+ VF+ + ++++VSWNT++ G + EAL+++ + K +T+ V+ C
Sbjct: 254 DAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCA 313
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
++ + +S + HG + + ++ ++ G+ A + N V W
Sbjct: 314 NLKQLALA-RQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSW 372
Query: 552 RCLLSGCKTHKDLVLG 567
++SGC + D+ L
Sbjct: 373 TAIISGCIQNGDIPLA 388
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
+H + + L+ MY + I+ AQ +F+ +R+++SW+++ISG++Q G A+ FR
Sbjct: 533 YHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFR 592
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN--CLINMYGK 123
M ++ + T++ + C G G++ M R ++N + + C++++Y +
Sbjct: 593 QMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDH-KINPTMEHYACMVDLYSR 651
Query: 124 CGLLS-SAQFVFDASLERNSISWVSLLSS 151
G L + + D ++ W +LL +
Sbjct: 652 AGKLDETMSLIRDMPFPAGAMVWRTLLGA 680
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/663 (33%), Positives = 364/663 (54%), Gaps = 4/663 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G H NV + L+ MY K ++ A+K+FD + E+NV+ W+A++ G+ Q G +
Sbjct: 354 LKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVM 413
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M C P+ +TY +SACA G ++H + ++ N V N L++MY
Sbjct: 414 ELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMY 473
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G L A+ F+ R+++SW ++ Y Q + V +F G+ E S A
Sbjct: 474 AKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLA 533
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L ACA + L+ G Q+H L K E + LI++YAKC +D A ++ + +
Sbjct: 534 SILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPER 593
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ + +ALI GYAQ+ +A++LF M G+ +E+TF+ +L A + ++ GRQ+H
Sbjct: 594 SVVSMNALIAGYAQINLE-QAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIH 652
Query: 302 SLIIKMGFS-SFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLASCH 359
SLI+KMG F+ ++L Y ++ F E + V W A+I+G +
Sbjct: 653 SLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDC 712
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
A++L K+M P+ T+ + L + + +I+ G +TH I GFDS+ + SA
Sbjct: 713 SVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSA 772
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
LVDMYAKCG + + +VF +S K+++SWN+M+VG+A++G +AL ++ M+++ + P
Sbjct: 773 LVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTP 832
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+D TF+GVL+AC H G V EG F+ M+ +G+ PR DH A +V L G + A EF
Sbjct: 833 DDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEF 892
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I EP+ VW +L C+ H D + G+ AAEK++ +P+++S +++LSN+YA + W
Sbjct: 893 INKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNW 952
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
DE +R+ M+EK +KK GCSW + + + F + ++ ++ L+ + +
Sbjct: 953 DEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAGDKSHHSASEIDAILKDLTPLMREN 1012
Query: 659 GYV 661
YV
Sbjct: 1013 DYV 1015
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/555 (29%), Positives = 290/555 (52%), Gaps = 4/555 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G P+ + + ++ YV R+++A LF MP RNV++W+ +ISG ++ G A+ +F
Sbjct: 256 GQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFF 315
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M ++ T +SA AS G +H + GL N +V + L++MY KC
Sbjct: 316 QNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKC 375
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + +A+ VFD E+N + W ++L Y Q G +++F + G +F+ +S+L
Sbjct: 376 GKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSIL 435
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA L L +G Q+HS++ K + FV L+++YAK L+ A + F I+ D
Sbjct: 436 SACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNV 495
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ +I GY Q EA LF +M G++P EV+ + +L A A V+ G+Q+H L
Sbjct: 496 SWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLS 555
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K G + + ++++D Y+KC ++ + K M E VVS NALIAG+ A + +A+
Sbjct: 556 VKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGY-AQINLEQAV 614
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD-SNVVIGSALVDM 423
L +DML EG T++++L+ + + G+Q H I+K G + +G +L+ M
Sbjct: 615 NLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGM 674
Query: 424 YAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
Y R DA +F S+ K+ V W M+ G +Q+ AL++Y M+ + P+ T
Sbjct: 675 YMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQAT 734
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F+ L AC + +++G +S+I G +++V ++A G + + + K
Sbjct: 735 FVSALRACAVVSSIKDGTET-HSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEM 793
Query: 543 PIEPNKVVWRCLLSG 557
+ + + W ++ G
Sbjct: 794 SRKKDVISWNSMIVG 808
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 157/553 (28%), Positives = 289/553 (52%), Gaps = 37/553 (6%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N ++ +Y K + ++ A++ F ++ ++++++W++++S S+ G P + + YF
Sbjct: 89 GFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYF 148
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
L+ + PN +T+ +S+CA + G+++H + + G E S+ LI MY KC
Sbjct: 149 GLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKC 208
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L+ A+ +FD ++E + +SW S++ Y + G +K+F K G
Sbjct: 209 NFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVG------------ 256
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
E D+ + +IN Y +LD AS +FS + ++
Sbjct: 257 -----------------------QEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVV 293
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
AW+ +I G+A+ G EAI+ F M +G+ + T VL A A + G +H+
Sbjct: 294 AWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEA 353
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K G S +V ++++ Y+KC +E + K FD ++E +VV WNA++ G++ + + E +
Sbjct: 354 LKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVM 413
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
EL +M G P+ +TYS+IL+ + + ++ G Q H I+K F SN+ +G+ALVDMY
Sbjct: 414 ELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMY 473
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AK G L DAR+ F+ + +++ VSWN ++VGY Q EA ++ M I P++ +
Sbjct: 474 AKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLA 533
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
+LSAC + +E+G ++ G ++ +S++ ++A G A++ + P
Sbjct: 534 SILSACASVRGLEQGKQVHCLSVKT-GQETKLYSGSSLIDMYAKCGAIDSAHKILACMP- 591
Query: 545 EPNKVVWRCLLSG 557
E + V L++G
Sbjct: 592 ERSVVSMNALIAG 604
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 166/558 (29%), Positives = 280/558 (50%), Gaps = 38/558 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF L+ MY K + + DA+ +FD E + +SW+++I G+ ++G+PE A
Sbjct: 186 VVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEA 245
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F+ M EP+ +V +IN
Sbjct: 246 VKVFQEMEKVGQEPDQVAFV-----------------------------------TVINA 270
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G L +A +F RN ++W ++S + + G V ++ F RK+G+ + +
Sbjct: 271 YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTL 330
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A A L L G+ +H+ K L + +V L+++YAKC K++ A +VF +
Sbjct: 331 GSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNE 390
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+A++GGY Q G A E ++LF M S G P + T+S +L A A +K G QL
Sbjct: 391 QNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQL 450
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS+IIK F+S FV N ++D Y+K LE++ + F+ + D VSWN +I G++
Sbjct: 451 HSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDE 510
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA L + M G P+ + ++IL+ + + +E GKQ HC VK G ++ + GS+L
Sbjct: 511 VEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSL 570
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMYAKCG ++ A K+ + +++VS N ++ GYAQ L +A+ ++ M I +
Sbjct: 571 IDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINL-EQAVNLFRDMLVEGINSTE 629
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA-SVVHLFACRGQTRRAYEFI 539
TF +L AC + G +S+I G+ + + S++ ++ +T A
Sbjct: 630 ITFASLLDACHEQQKLNLG-RQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLF 688
Query: 540 KSSPIEPNKVVWRCLLSG 557
+ VVW ++SG
Sbjct: 689 SEFSNPKSAVVWTAMISG 706
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 248/503 (49%), Gaps = 45/503 (8%)
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
+ + K IH + + G + N ++++Y KC + A+ F +++ ++W S+LS
Sbjct: 75 STTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSM 134
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
+ + G +K F L SGV +EF+ A VL +CA L +K G Q+H V K E
Sbjct: 135 HSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESI 194
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
+ LI +YAKC L A +F D +W+++IGGY ++G EA+ +F +M
Sbjct: 195 SYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEK 254
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
G P +V F V+ A+ D+ GR L+
Sbjct: 255 VGQEPDQVAFVTVINAYVDL-----GR------------------------------LDN 279
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+ F M +VV+WN +I+GH + EAIE ++M G T ++L+ +
Sbjct: 280 ASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIAS 339
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ A+++G H +K G SNV +GS+LV MYAKCG++ A+KVFD L+ +N+V WN M
Sbjct: 340 LAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAM 399
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
L GY Q+G E +E++ M+ P+D T+ +LSAC + ++ G H +S+I +
Sbjct: 400 LGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLG-HQLHSVIIKNK 458
Query: 512 ISPRMDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
+ + ++V ++A G R+ +E I++ + V W ++ G +D V
Sbjct: 459 FASNLFVGNALVDMYAKSGALEDARQQFELIRNR----DNVSWNVIIVGYVQEEDEVEAF 514
Query: 569 YAAEK--ILSTDPEDTSAHIMLS 589
+ + +L P++ S +LS
Sbjct: 515 HLFRRMNLLGILPDEVSLASILS 537
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 235/486 (48%), Gaps = 9/486 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + F N+ N L+ MY K + DA++ F+ + R+ +SW+ +I G+ Q A
Sbjct: 454 IIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEA 513
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ FR M + P+ + +SACAS GK++H ++G E + + LI+M
Sbjct: 514 FHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDM 573
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + SA + ER+ +S +L++ Y Q + +F G+ +E +
Sbjct: 574 YAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLE-QAVNLFRDMLVEGINSTEITF 632
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEF-DKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
AS+L AC L +G QIHSL+ K L+ D+F+ + L+ +Y + AS +FS
Sbjct: 633 ASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFS 692
Query: 240 LP-DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
P W+A+I G +Q + A+ L+ +M S ++P + TF L A A V G
Sbjct: 693 NPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGT 752
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLAS 357
+ HSLI GF S ++ ++D Y+KC ++ S++ F EM + DV+SWN++I G +
Sbjct: 753 ETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKN 812
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVI 416
+ +A+ + +M P+ T+ +L S + G+ +V G
Sbjct: 813 GYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADH 872
Query: 417 GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQ 472
+ +VD+ + G L +A + + L+ + W TML HG G++A E ++
Sbjct: 873 CACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELE 932
Query: 473 ENKIKP 478
P
Sbjct: 933 PQNSSP 938
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/670 (31%), Positives = 367/670 (54%), Gaps = 32/670 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRIND---AQKLFDEMPERNVISWSALISGFSQIGMP 57
MI++G++P+ +L++Y + ++D A+KLF+EMPERN+ +W+ +I ++++
Sbjct: 97 MISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDY 156
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
A F M+ + P+ +T+ A+ C + GK++H ++ G + ++ V N L
Sbjct: 157 MEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNAL 216
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS--GVAI 175
I+MY KC S VFD ERN ++W S++S+ Q G L +FL ++S G+
Sbjct: 217 IDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQP 276
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+F+ ++L CA N G QIH+ + + + + V L+++Y++C +L+ A +F
Sbjct: 277 DQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIF 336
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ + + +W+++I GY Q G+ EA+ LF +M +G+ P + S +L + + ++
Sbjct: 337 NRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQ 396
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHD--VVSWNALIAG 353
GR+LH+ I++ + ++D Y+KC ++ + K +D+ + D WN+++AG
Sbjct: 397 KGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAG 456
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ E+ +ML SDI E+ T IV
Sbjct: 457 YANKGLKKESFNHFLEML-----------------ESDI---EYDVLTMVTIVNL----- 491
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+V+ +ALVDMY+KCG + AR VFD+++ KN+VSWN M+ GY++HG +EAL +Y M +
Sbjct: 492 LVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPK 551
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+ PN+ TF+ +LSAC H GLVEEG F SM D+ I + +H +V L G+
Sbjct: 552 KGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLE 611
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A EF++ PIEP W LL C+ HKD+ +GR AA+++ DP++ ++++SN+YA
Sbjct: 612 DAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYA 671
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
A W E +R++MK K +KKD G SW E+ +++ F + +++ + L++
Sbjct: 672 AAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTL 731
Query: 654 HLFDGGYVPD 663
GY+PD
Sbjct: 732 QSKGLGYIPD 741
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 213/394 (54%), Gaps = 7/394 (1%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
K ++ +S++ C + + G IH+ + D ++ ++ LYA+ LD
Sbjct: 64 KPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLD 123
Query: 230 ---LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
A ++F + +LTAW+ +I YA++ EA +F +M G+ P TF+ L
Sbjct: 124 DLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALR 183
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
++ GG+Q+HS +I GF TFV N ++D Y+KC+ E LK FDEM E + V+
Sbjct: 184 VCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVT 243
Query: 347 WNALIAGHLASCHYGEAIELLKDML--FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCC 404
WN++I+ H+ +A+ L M +G P+ +T++ +L + ++ G+Q H
Sbjct: 244 WNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAH 303
Query: 405 IVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREA 464
+++ N+++ + LV MY++CGRLN A+++F+ ++ +N SWN+M+ GY Q+G +EA
Sbjct: 304 LIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEA 363
Query: 465 LEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVH 524
L ++ MQ N IKP+ + +LS+CV + ++G N ++R+ + + +V
Sbjct: 364 LRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVV-LVD 422
Query: 525 LFACRGQTRRAYE-FIKSSPIEPNKVVWRCLLSG 557
++A G A++ + ++ + N +W +L+G
Sbjct: 423 MYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAG 456
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/673 (32%), Positives = 359/673 (53%), Gaps = 2/673 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF +V+T + L+ MY K + + D+ +F E+P++N ISWSA I+G Q L
Sbjct: 184 VQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGL 243
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M + + TY +CA +R G ++H ++ + V ++MY
Sbjct: 244 KLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMY 303
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC +S A +F + N S+ +++ Y + + K+FL +K+ + E S +
Sbjct: 304 AKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLS 363
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
L A AV+ G+Q+H L K L + VA ++++Y KC L AS +F +++
Sbjct: 364 GALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIR 423
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +W+A+I Q + + F M S + P E T+ VL A A + G ++H
Sbjct: 424 DPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVH 483
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
IIK G FV + ++D YSKC ++EE+ K ++E +VSWNA+I+G
Sbjct: 484 GRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSE 543
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
++ ML G P+ +TY+ +L+ +++ + GKQ H ++K S+V I S LV
Sbjct: 544 DSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLV 603
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY+KCG ++D+ +F ++ V+WN M+ G+A HGLG EALE++ M IKPN
Sbjct: 604 DMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHA 663
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL AC H+G ++G YF M + + P+++H + +V + GQ A I+
Sbjct: 664 TFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQD 723
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P E + ++WR LLS CK ++ + AA +L DPED+SA+ +LSN+YA+A MW +
Sbjct: 724 MPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQV 783
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
+K+R+ M+ +LKK+ GCSW E+++++H F A + ++ +++ L + G
Sbjct: 784 SKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSGCA 843
Query: 662 P--DPIYSSHFEE 672
P D I EE
Sbjct: 844 PEIDTIQVEEVEE 856
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/604 (29%), Positives = 298/604 (49%), Gaps = 37/604 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERN-------------------- 40
MI SGF P V N L+ MYVK + A K+F+EMP+R+
Sbjct: 50 MILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNTMVFGCAGAGRMELA 109
Query: 41 ------------VISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
V+SW++LISG+ Q G + ++ F M + ++ T ++ C+
Sbjct: 110 QAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSL 169
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
D G +IHG + G + + + L++MY KC L + VF ++N ISW +
Sbjct: 170 LEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAA 229
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
++ Q + + GLK+F ++ G+ +S+ + ASV +CA L ++G Q+H K
Sbjct: 230 IAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDF 289
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
D V +++YAKC+ + A ++FS + +L +++A+I GYA+ + +A LF++
Sbjct: 290 GSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQ 349
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
+ + EV+ S L A A +K G QLH L IK SS VAN +LD Y KC
Sbjct: 350 LQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGA 409
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
L E+ FDEM+ D VSWNA+I + G+ + ML P+ +TY ++L
Sbjct: 410 LVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKA 469
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ A G + H I+K G + +GSALVDMY+KCG + +A K+ L + +VSW
Sbjct: 470 CAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSW 529
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
N ++ G++ ++ +S M E ++P++ T+ VL C ++ V G MI+
Sbjct: 530 NAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIK 589
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
+S + +++V +++ G + + +P + + V W ++ G H LG
Sbjct: 590 LELLSD-VYITSTLVDMYSKCGNMHDSLLMFRKAP-KRDSVTWNAMICGFAYHG---LGE 644
Query: 569 YAAE 572
A E
Sbjct: 645 EALE 648
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 238/517 (46%), Gaps = 34/517 (6%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T+ C++R + GKE H M SG V+NCLI MY KC L A VF+
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 138 LER--------------------------------NSISWVSLLSSYCQCGEHVHGLKIF 165
+R + +SW SL+S Y Q G+ + +F
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 166 LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC 225
L R GV + A L C++L + +G+QIH + + ++D L+++YAKC
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205
Query: 226 EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
L+ + VFS + + +WSA I G Q + + LF +M G+ S+ T++ V
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265
Query: 286 GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
+ A + + G QLH +K F S V LD Y+KC+ + ++ K F + +H++
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
S+NA+I G+ + +A +L + + + S L+ ++ I G Q H
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLA 385
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
+K SN+ + +A++DMY KCG L +A +FD + ++ VSWN ++ Q+ + L
Sbjct: 386 IKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTL 445
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
+ M +K++P++ T+ VL AC G +I+ G+ +M +++V +
Sbjct: 446 SHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKS-GMGLKMFVGSALVDM 504
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
++ G A E I E V W ++SG K
Sbjct: 505 YSKCGMMEEA-EKIHYRLEEQTMVSWNAIISGFSLQK 540
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 131/254 (51%), Gaps = 6/254 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + + L+ MY K + +A+K+ + E+ ++SW+A+ISGFS E +
Sbjct: 486 IIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDS 545
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+F M+ +EP+ +TY + CA+ GK+IH +M + L + ++++ L++M
Sbjct: 546 QRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDM 605
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + + +F + +R+S++W +++ + G L++F + + +
Sbjct: 606 YSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATF 665
Query: 181 ASVLGACAVLGNLKVGM---QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
SVL AC+ +GN K G+ Q + ++ + + + M +++ + +++ A R+ +
Sbjct: 666 VSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCM--VDILGRSGQVEEALRLIQD 723
Query: 238 IQL-PDLTAWSALI 250
+ D W L+
Sbjct: 724 MPFEADAIIWRTLL 737
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/665 (32%), Positives = 373/665 (56%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GFH ++ + L+ +Y I DA+++FDE+P+R+ I W+ ++ G+ + G A+ F
Sbjct: 175 GFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTF 234
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M N TY +S CA+RG G ++HG + SG E + V+N L+ MY KC
Sbjct: 235 CGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKC 294
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L A+ +F+ + ++++W L++ Y Q G +F +GV + AS L
Sbjct: 295 GNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFL 354
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+ G+L+ ++HS + + + FD ++ LI++Y K +++A ++F L D+
Sbjct: 355 PSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVA 414
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+A+I GY G +AI+ F + G++P+ +T + VL A A + G++LH I
Sbjct: 415 VCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDI 474
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K + V + + D Y+KC L+ + + F M E D + WN++I+ + A+
Sbjct: 475 LKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAV 534
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L + M G + + S+ L+ ++++PA+ +GK+ H +++ F S+ + SAL+DMY
Sbjct: 535 DLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMY 594
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+KCG+L AR VF+ ++ KN VSWN+++ Y HG RE L+++ M + P+ TF+
Sbjct: 595 SKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFL 654
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
++SAC H GLV EG HYF+ M R++GI RM+H A +V L+ G+ A++ IKS P
Sbjct: 655 VIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPF 714
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
P+ VW LL C+ H ++ L + A+ +L DP+++ +++LSNV+A+A W KV
Sbjct: 715 TPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKV 774
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDP 664
R++MKEK ++K G SW ++ H FS + + ++++ ++N L + L GYVP P
Sbjct: 775 RRLMKEKGVQKIPGYSWIDVNGGTHMFSAAEGNHPESVEIYLILNSLLLELRKQGYVPQP 834
Query: 665 IYSSH 669
H
Sbjct: 835 YLPLH 839
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 234/458 (51%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
+ +L +YV RI+D LF + N + W+ +I G +G + AL ++ M+ +
Sbjct: 83 SRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVS 142
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT+ + AC + +H G ++ V + LI +Y G + A+ V
Sbjct: 143 PDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRV 202
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD +R++I W +L Y + G+ + + F R S ++ + +L CA G
Sbjct: 203 FDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKF 262
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G Q+H LV EFD VA L+ +Y+KC L A ++F+ + D W+ LI GY
Sbjct: 263 CLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGY 322
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q G EA LF M S+G+ P VTF+ L + + +++HS I++
Sbjct: 323 VQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDV 382
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
++ + ++D Y K +E + K F + DV A+I+G++ +AI + ++ E
Sbjct: 383 YLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQE 442
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G PN T +++L + + A++ GK+ HC I+K ++ V +GSA+ DMYAKCGRL+ A
Sbjct: 443 GMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLA 502
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+ F +S + + WN+M+ ++Q+G A++++ M
Sbjct: 503 YEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQM 540
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 236/464 (50%), Gaps = 8/464 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF + N L+ MY K + DA+KLF+ MP+ + ++W+ LI+G+ Q G + A
Sbjct: 272 VIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEA 331
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M+ ++P+ T+ + + G R KE+H + R + + ++ + LI++
Sbjct: 332 APLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDI 391
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+ +F + + +++S Y G ++ + F + G+ + +
Sbjct: 392 YFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTM 451
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASVL ACA L LK+G ++H + K LE V + ++YAKC +LDLA F +
Sbjct: 452 ASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSE 511
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+++I ++Q GK A+DLF +M SG V+ S L + A++ G+++
Sbjct: 512 TDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEM 571
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +I+ FSS TFVA+ ++D YSKC L + F+ M + VSWN++IA +
Sbjct: 572 HGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCA 631
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSA 419
E ++L +ML G P+ T+ I++ + G HC + G + + +
Sbjct: 632 RECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYAC 691
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVS----WNTMLVGYAQHG 459
+VD+Y + GRL++A FD + S W T+L HG
Sbjct: 692 MVDLYGRAGRLHEA---FDAIKSMPFTPDAGVWGTLLGACRLHG 732
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 224/472 (47%), Gaps = 2/472 (0%)
Query: 85 ACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSIS 144
AC+ + +++H ++ G+ +S+ ++ +Y CG +S +F N++
Sbjct: 53 ACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALP 112
Query: 145 WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF 204
W ++ G L + S V+ +++ V+ AC L N+ + M +H+
Sbjct: 113 WNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTAR 172
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
D FV LI LYA + A RVF + D W+ ++ GY + G A+
Sbjct: 173 SLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMG 232
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
F M +S M + VT++ +L A + G Q+H L+I GF VANT++ YS
Sbjct: 233 TFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYS 292
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
KC L ++ K F+ M + D V+WN LIAG++ + EA L M+ G P+ T+++
Sbjct: 293 KCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFAS 352
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
L + ++ K+ H IV+ +V + SAL+D+Y K G + ARK+F + +
Sbjct: 353 FLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVD 412
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
+ M+ GY HGL +A+ + + + + PN T VL AC + ++ G
Sbjct: 413 VAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHC 472
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+++ + ++ +++ ++A G+ AYEF + E + + W ++S
Sbjct: 473 DILKKQ-LENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-ETDSICWNSMIS 522
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 152/313 (48%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+ AC+ ++ Q+H+ + + ++ ++ LY C ++ +F ++L
Sbjct: 49 SLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELC 108
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ W+ +I G LG A+ + KM S + P + TF YV+ A + +H
Sbjct: 109 NALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 168
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ +GF FV + ++ Y+ + ++ + FDE+ + D + WN ++ G++ S +
Sbjct: 169 NTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFN 228
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
A+ M N TY+ IL+I + G Q H ++ GF+ + + + LV
Sbjct: 229 NAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLV 288
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
MY+KCG L DARK+F+ + + V+WN ++ GY Q+G EA +++ M +KP+
Sbjct: 289 AMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSV 348
Query: 482 TFIGVLSACVHIG 494
TF L + + G
Sbjct: 349 TFASFLPSILESG 361
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/597 (34%), Positives = 342/597 (57%), Gaps = 12/597 (2%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS-NCLINMYGKCGLLSSAQFV 133
N T + ++ A A + GKEIH M +G LNS +S LINMY KC ++ A +
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGF-LNSPLSITSLINMYSKCNQMNFALSI 94
Query: 134 F-DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
F D + E N ++ +++S + G G + + R GV +F+ + AC +
Sbjct: 95 FSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLE 154
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+K +IH L+FK LE D F+ L+N Y K ++ A F + + D+ W+A++ G
Sbjct: 155 IK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNG 211
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
YAQ+G+ ++ F +M ++PS T + VL FA + + GR +H +KMG+ S
Sbjct: 212 YAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSG 271
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V+N+++D Y KC+ +E++L+ F+ M E D+ SWN++++ H + + LL ML
Sbjct: 272 VAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLG 331
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN------VVIGSALVDMYAK 426
G P+L T + +L S + A+ G++ H ++ G + V++ +A++DMYAK
Sbjct: 332 AGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAK 391
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + DA VF+ +S+K++ SWN M++GY HG G EALE++S M E ++KP++ TF+GV
Sbjct: 392 CGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGV 451
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC H G V +G ++ M + ++P ++H V+ + GQ AYE + PIE
Sbjct: 452 LSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEA 511
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
N VVWR LL+ C+ HK VL AA+++ +PE +++++SNVY ++E +VR
Sbjct: 512 NPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRH 571
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
M++++++K GCSW EL+N +H F ++ A + ++ +N L+ L + GYVPD
Sbjct: 572 TMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLREHGYVPD 628
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 231/468 (49%), Gaps = 14/468 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLF-DEMPERNVISWSALISGFSQIGMPEV 59
M+ +GF + ++ L+ MY K +++N A +F D E NV +++A+ISGF G PE
Sbjct: 63 MLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEE 122
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+++ M + P+ +T+ A+ AC D K+IHG +++ GLEL+ + + L+N
Sbjct: 123 GFEFYQKMRNEGVIPDKFTFPCAIKACL---DVLEIKKIHGLLFKFGLELDVFIGSALVN 179
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y K GL+ AQ F+ R+ + W ++++ Y Q G+ L+ F V S F+
Sbjct: 180 CYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFT 239
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
VL AV+G+L G IH K + V+ LI++Y KC+ ++ A +F ++
Sbjct: 240 VTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR 299
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +W++++ + Q G + L +M +G+ P VT + VL A + + + GR+
Sbjct: 300 EKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGRE 359
Query: 300 LHSLIIKMGFS------SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
+H +I G + N V+D Y+KC + ++ F+ M DV SWN +I G
Sbjct: 360 IHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMG 419
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ + EA+E+ M P+ T+ +L+ S + G+ +K +D
Sbjct: 420 YGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGR-NFLVQMKSKYDVA 478
Query: 414 VVIG--SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
I + ++DM + G+L++A ++ + N V W +L H
Sbjct: 479 PTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLH 526
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 197/397 (49%), Gaps = 22/397 (5%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V + L+ Y+KF + AQ F+E+P R+V+ W+A+++G++QIG E+ L F
Sbjct: 166 GLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETF 225
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R M + P+ +T G +S A GD +G+ IHG + G + VSN LI+MYGKC
Sbjct: 226 RRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKC 285
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ A +F+ E++ SW S++S + QCG+H L++ +G+ + +VL
Sbjct: 286 KCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVL 345
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDK------FVAMGLINLYAKCEKLDLASRVFSNI 238
AC+ L L G +IH + L D + +I++YAKC + A VF +
Sbjct: 346 PACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERM 405
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +W+ +I GY G EA+++F +M L P EVTF VL A + GR
Sbjct: 406 SNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGR 465
Query: 299 QLHSLIIKMGFSSFTFVANT------VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALI 351
+ +++M S VA T V+D + L+E+ + M E + V W AL+
Sbjct: 466 ---NFLVQM--KSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Query: 352 AGHLASCHYGEAIELLKDMLFE---GHCPNLYTYSNI 385
A H A E+ +FE HC + SN+
Sbjct: 521 AACRLHKHAVLA-EVAAQRVFELEPEHCGSYVLMSNV 556
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/659 (33%), Positives = 349/659 (52%), Gaps = 70/659 (10%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN + + +C AR + +H R+ + + + N LI++YGKC L A+ +
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 134 FDASLERNSISWVSLLS---------------------SYCQCGEHVHG----------L 162
FD +RN+ +W SL+S C V G L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 163 KIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
+ F+ + ++E+S S L ACA L +L +G Q+H+LV K D ++ LI++Y
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
+KC + A VFS + +L W++LI Y Q G A EA+++FV+M SGL P EVT +
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFD---- 337
V+ A A + G Q+H+ ++K F + N ++D Y+KC + E+ + FD
Sbjct: 253 SVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI 312
Query: 338 ---------------------------EMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
+M + +VVSWNALIAG+ + EA+ L + +
Sbjct: 313 RNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLL 372
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD------SNVVIGSALVDMY 424
E P YT+ N+L+ +++ + G+Q H ++K GF+ S++ +G++L+DMY
Sbjct: 373 KRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMY 432
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG + D +VF+ + ++ VSWN ++VGYAQ+G G EAL+I+ M KP+ T I
Sbjct: 433 MKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMI 492
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVL AC H GLVEEG HYF SM +HG+ P DH +V L G A I++ P+
Sbjct: 493 GVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPV 551
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
P+ VVW LL+ CK H ++ +G++AAEK+L DP ++ +++LSN+YAE W + +V
Sbjct: 552 NPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRV 611
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
RK+M+++ + K GCSW E+++++H F + ++ V+ L+ + GY+PD
Sbjct: 612 RKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPD 670
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 172/370 (46%), Gaps = 35/370 (9%)
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+P+ F+ +L + + G R +H+ I+ FS F+ N ++D Y KC+ L+++ K
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 335 TFDE-------------------------------MDEHDVVSWNALIAGHLASCHYGEA 363
FD M E D SWN++++G + E+
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+E M E N Y++ + L+ + + + G Q H + K + ++V +GSAL+DM
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y+KCG + A +VF + +NLV+WN+++ Y Q+G EALE++ M ++ ++P++ T
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
V+SAC + ++EG +++ + + ++V ++A + A
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
I N V ++SG + R+ K+ + +A I Y + +E +
Sbjct: 312 IR-NVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIA---GYTQNGENEEALR 367
Query: 604 VRKIMKEKSL 613
+ +++K +S+
Sbjct: 368 LFRLLKRESI 377
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 37/222 (16%)
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L++D+ + PN ++ +L+ + + H I+ F + I + L+D+Y
Sbjct: 6 LVRDL----YLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYG 61
Query: 426 KCGRLNDARKVFDHLSSKNLV-------------------------------SWNTMLVG 454
KC L+DARK+FD + +N SWN+M+ G
Sbjct: 62 KCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSG 121
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
+AQH E+LE + M N+ +F LSAC + + G ++++ S
Sbjct: 122 FAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQ-VHALVSKSRYST 180
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+ ++++ +++ G A E + S IE N V W L++
Sbjct: 181 DVYMGSALIDMYSKCGSVACAEE-VFSGMIERNLVTWNSLIT 221
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/667 (33%), Positives = 379/667 (56%), Gaps = 10/667 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSR--INDAQKLFDEMPE--RNVISWSALISGFSQIGMP 57
+ SG + N L+ Y R + A +FD++P R+V SW++L++ S+ P
Sbjct: 39 LKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLLNPLSR-HRP 97
Query: 58 EVALNYFRLMVCC-VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL-NSHVSN 115
AL+ FR M+ + P+ +++ A +A A A +G H + + N +V
Sbjct: 98 LDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAVSNVYVCT 157
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC--QCGEHVHGLKIFLLSRKSGV 173
L+NMY K G++S A+ +FD +RNS SW ++++ Y +C E L +L +
Sbjct: 158 SLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML-EECPS 216
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
SEF +VL A +V L +G Q+H L+ K L V L+ +YAK + A
Sbjct: 217 EKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFH 276
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
VF + + + WSA+I GYAQ G+A A+ +F +M ++G P+E TF VL A +D+
Sbjct: 277 VFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGA 336
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+Q H L++K+GF +V + ++D Y+KC + ++ + FD++ E D+V W A+++G
Sbjct: 337 LAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSG 396
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
H+ + + EA+ L M EG P+ T ++ L + I A+E GKQ H IVK G
Sbjct: 397 HVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLG 456
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+GSAL MY+KCG L D VF + +++++WN+++ G++Q+G G AL+++ M+
Sbjct: 457 APVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKM 516
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
P++ TFI +L AC H+GLV+ GW YF+ M +D+G++PR+DH A +V + + G +
Sbjct: 517 EGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLK 576
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A +FI+S I+ +WR +L C++ +D +G YA E+++ D+SA+I+LSN+YA
Sbjct: 577 EAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYILLSNIYA 636
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W++ +VR +M+ + + KD GCSW EL +++H F + +++ + +L+
Sbjct: 637 SQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAK 696
Query: 654 HLFDGGY 660
H+ D GY
Sbjct: 697 HMKDEGY 703
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 141/475 (29%), Positives = 229/475 (48%), Gaps = 16/475 (3%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKC--GLLSSAQFVFD--ASLERNSISWVSL 148
R G+ +H +SG ++ V+N LIN Y LL++A VFD R+ SW SL
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSL 88
Query: 149 LSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
L+ + + L F +LS S V S S A+ A A + G H+L K
Sbjct: 89 LNPLSR-HRPLDALSRFRSMLS-SSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKI 146
Query: 207 ALEFDK-FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
+V L+N+Y K + A R+F + + +WS ++ GYA + EA DL
Sbjct: 147 PSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDL 206
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIG---GRQLHSLIIKMGFSSFTFVANTVLDF 322
F M PSE + + V +G G Q+H LI+K G F V N+++
Sbjct: 207 FRLMLEE--CPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTM 264
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
Y+K + + F+ E + ++W+A+I G+ + A+ + M G P +T+
Sbjct: 265 YAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTF 324
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+LN SSD+ A+ GKQ H +VK GF+ + + SALVDMYAKCG + DA++ FD L
Sbjct: 325 VGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYE 384
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
++V W M+ G+ Q+G EAL +Y+ M + I P+ +T L AC I +E G
Sbjct: 385 VDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQL 444
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+++ +G+ +++ +++ G + P + + + W ++SG
Sbjct: 445 HTQIVK-YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP-DRDVIAWNSIISG 497
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 182/355 (51%), Gaps = 2/355 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G V N L+ MY K + A +F+ ERN I+WSA+I+G++Q G + A
Sbjct: 246 IVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSA 305
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F M P +T+VG ++A + G GK+ HG M + G E+ +V + L++M
Sbjct: 306 VSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDM 365
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG ++ A+ FD E + + W +++S + Q GEH L ++ K G+ S+ +
Sbjct: 366 YAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTI 425
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS L ACA + L+ G Q+H+ + K L V L +Y+KC L+ VF I
Sbjct: 426 ASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPD 485
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ AW+++I G++Q G A+DLF +M G +P +TF +L A + + G +
Sbjct: 486 RDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEY 545
Query: 301 HSLIIK-MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
SL+ K G + ++D S+ +L+E+ + + +H W ++
Sbjct: 546 FSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGA 600
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 335/592 (56%), Gaps = 1/592 (0%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
+ G + CA G+E+H + +SG++ N ++ N L++MY KCG L+ A+ VFD+
Sbjct: 50 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIR 109
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
+RN +SW +++ ++ +++ K + + +G + + S+L A L++G +
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQK 169
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H + + LE + V L+ +YAKC + A +F + ++ W+ LI GYAQ G+
Sbjct: 170 VHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQ 229
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
A++L M + + P+++TF+ +L G+++H II+ G+ +V N+
Sbjct: 230 VDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNS 289
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
++ Y KC LEE+ K F ++ DVV+W A++ G+ + EAI L + M +G P+
Sbjct: 290 LITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPD 349
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T++++L S ++ GK+ H +V G++ +V + SALV MYAKCG ++DA VF+
Sbjct: 350 KMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFN 409
Query: 439 HLSSKNLVSWNTMLVG-YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+S +N+V+W ++ G AQHG REALE + M++ IKP+ TF VLSAC H+GLVE
Sbjct: 410 QMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVE 469
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
EG +F SM D+GI P ++H + V L G A I S P P VW LLS
Sbjct: 470 EGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSA 529
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
C+ H D+ G AAE +L DP+D A++ LS++YA A +++ KVR++M+++ + K+
Sbjct: 530 CRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEP 589
Query: 618 GCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
G SW E+ K+H F + + ++ + +L+ + + GYVPD + H
Sbjct: 590 GQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLH 641
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 129/441 (29%), Positives = 235/441 (53%), Gaps = 6/441 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG PN N LL MY K + DA+++FD + +RN++SW+A+I F A
Sbjct: 73 ILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEA 132
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M +P+ T+V ++A + + G+++H + +GLEL V L+ M
Sbjct: 133 FKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGM 192
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG +S A+ +FD E+N ++W L++ Y Q G+ L++ +++ VA ++ +
Sbjct: 193 YAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITF 252
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L C L+ G ++H + + + +V LI +Y KC L+ A ++FS++
Sbjct: 253 ASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPH 312
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+A++ GYAQLG EAI+LF +M G+ P ++TF+ VL + + G+++
Sbjct: 313 RDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRI 372
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS--- 357
H ++ G++ ++ + ++ Y+KC ++++ F++M E +VV+W A+I G A
Sbjct: 373 HQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGR 432
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVI 416
C EA+E M +G P+ T++++L+ + + +E G K + G V
Sbjct: 433 CR--EALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEH 490
Query: 417 GSALVDMYAKCGRLNDARKVF 437
S VD+ + G L +A V
Sbjct: 491 YSCFVDLLGRAGHLEEAENVI 511
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/667 (33%), Positives = 378/667 (56%), Gaps = 10/667 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSR--INDAQKLFDEMPE--RNVISWSALISGFSQIGMP 57
+ SG + N L+ Y R + A +FD++P R+V SW++L++ S P
Sbjct: 39 LKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLLNPLSG-HRP 97
Query: 58 EVALNYFRLMVCC-VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL-NSHVSN 115
AL+ FR M+ + P+ +++ A +A A A +G H + + N +V
Sbjct: 98 LDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAVSNVYVCT 157
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC--QCGEHVHGLKIFLLSRKSGV 173
L+NMY K G++S A+ VFD +RNS SW ++++ Y +C E L +L +
Sbjct: 158 SLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML-EECPS 216
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
SEF +VL A +V L +G Q+H L+ K L V L+ +YAK + A
Sbjct: 217 EKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFH 276
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
VF + + + WSA+I GYAQ G+A A+ +F +M ++G P+E TF VL A +D+
Sbjct: 277 VFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGA 336
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+Q H L++K+GF +V + ++D Y+KC + ++ + FD++ E D+V W A+++G
Sbjct: 337 LAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSG 396
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
H+ + + EA+ L M EG P+ T ++ L + I A+E GKQ H IVK G
Sbjct: 397 HVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLG 456
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+GSAL MY+KCG L D VF + +++++WN+++ G++Q+G G AL+++ M+
Sbjct: 457 APVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKM 516
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
P++ TFI +L AC H+GLV+ GW YF+ M +D+G++PR+DH A +V + + G +
Sbjct: 517 EGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLK 576
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A +FI+S I+ +WR +L C++ +D +G YA E+++ D+SA+I+LSN+YA
Sbjct: 577 EAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYA 636
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W++ +VR +M+ + + KD GCSW EL +++H F + +++ + +L+
Sbjct: 637 SQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAK 696
Query: 654 HLFDGGY 660
H+ D GY
Sbjct: 697 HMKDEGY 703
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/475 (29%), Positives = 228/475 (48%), Gaps = 16/475 (3%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKC--GLLSSAQFVFD--ASLERNSISWVSL 148
R G+ +H +SG ++ V+N LIN Y LL++A VFD R+ SW SL
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSL 88
Query: 149 LSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
L+ + L F +LS S V S S A+ A A + G H+L K
Sbjct: 89 LNPL-SGHRPLDALSRFRSMLS-SSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKI 146
Query: 207 ALEFDK-FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
+V L+N+Y K + A RVF + + +WS ++ GYA + EA DL
Sbjct: 147 PSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDL 206
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIG---GRQLHSLIIKMGFSSFTFVANTVLDF 322
F M PSE + + V +G G Q+H LI+K G F V N+++
Sbjct: 207 FRLMLEE--CPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTM 264
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
Y+K + + F+ E + ++W+A+I G+ + A+ + M G P +T+
Sbjct: 265 YAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTF 324
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+LN SSD+ A+ GKQ H +VK GF+ + + SALVDMYAKCG + DA++ FD L
Sbjct: 325 VGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYE 384
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
++V W M+ G+ Q+G EAL +Y+ M + I P+ +T L AC I +E G
Sbjct: 385 VDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQL 444
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+++ +G+ +++ +++ G + P + + + W ++SG
Sbjct: 445 HTQIVK-YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP-DRDVIAWNSIISG 497
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 178/339 (52%), Gaps = 2/339 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G V N L+ MY K + A +F+ ERN I+WSA+I+G++Q G + A
Sbjct: 246 IVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSA 305
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F M P +T+VG ++A + G GK+ HG M + G E+ +V + L++M
Sbjct: 306 VSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDM 365
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG ++ A+ FD E + + W +++S + Q GEH L ++ K G+ S+ +
Sbjct: 366 YAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTI 425
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS L ACA + L+ G Q+H+ + K L V L +Y+KC L+ VF I
Sbjct: 426 ASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPD 485
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ AW+++I G++Q G A+DLF +M G +P +TF +L A + + G +
Sbjct: 486 RDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEY 545
Query: 301 HSLIIK-MGFSSFTFVANTVLDFYSKCELLEESLKTFDE 338
SL+ K G + ++D S+ +L+E+ K F E
Sbjct: 546 FSLMTKDYGLTPRLDHYACMVDILSRAGMLKEA-KDFIE 583
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/638 (33%), Positives = 369/638 (57%), Gaps = 7/638 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + F+P + N+ L +Y K+ + +AQKLFD M ER+VIS++ LISG+ +G A
Sbjct: 35 MIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKA 94
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F L+ + ++Y G +SAC D GK IHG GL ++N LI+M
Sbjct: 95 IGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDM 154
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + A+ +F++S E +++SW SL++ Y + G + LK+ + +G+ ++ F+
Sbjct: 155 YCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTL 214
Query: 181 ASVLGACAV-LGNL-KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S L +C + L N+ G +H K L+ D V L+++YAK L A ++F
Sbjct: 215 GSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTS 274
Query: 239 QLPDLTAWSALIGGYAQ---LGKAC--EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
++ ++A+I G+ Q + K C EA+ LF +M G+ PS+ TFS ++ ++
Sbjct: 275 PNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEA 334
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+Q+H+ I K S F+ +T+++ YS E+ LK F+ + D+VSW +IAG
Sbjct: 335 FEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAG 394
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ + + A+ L ++L G P+ + + +L+ +D+ A G+Q H VK G +
Sbjct: 395 YAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTL 454
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
++ ++ + MYAK G L+ A+ F+ + + ++VSW+ M+ AQHG ++A+ ++ +M+
Sbjct: 455 AIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKS 514
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
I PN TF+GVL+AC H GLVEEG Y+ SM +D+ + + H +V L + G+
Sbjct: 515 YGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLL 574
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A FI +S + V+WR LLSGC+ +KD+V G++ AEK++ DP+++S++++L N+Y
Sbjct: 575 DAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYT 634
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+A + K+R++MK++ ++K+ G SW E+ N++H F
Sbjct: 635 DAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSF 672
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 243/494 (49%), Gaps = 17/494 (3%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y V + G + GK H M ++ + N +N+Y K G + +AQ +FD
Sbjct: 12 YTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMS 71
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
ER+ IS+ L+S Y G + + +F +R + + + +FS A VL AC + + +G
Sbjct: 72 ERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKV 131
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
IH L C L F+ LI++Y KCE++D A +F + D +W++LI GYA++G
Sbjct: 132 IHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGA 191
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGA-FADVKETIG-GRQLHSLIIKMGFSSFTFVA 316
E + L VKM +GL + T L + + ++ + G+ LH +K G V
Sbjct: 192 YEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVG 251
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS------CHYGEAIELLKDM 370
+LD Y+K L ++++ F +VV +NA+IAG + + C Y EA++L M
Sbjct: 252 TALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAY-EALKLFSQM 310
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
+G P+ +T+S+I+ I + I A E+GKQ H I K S+ IGS L+++Y+ G
Sbjct: 311 QRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGST 370
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
D K F+ ++VSW TM+ GYAQ+G AL ++ + + KP++ +LSAC
Sbjct: 371 EDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSAC 430
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA---YEFIKSSPIEPN 547
+ G ++ GI S + ++A G A +E IK+ P+
Sbjct: 431 ADVAAERSGEQVHGYAVKT-GIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKN----PD 485
Query: 548 KVVWRCLLSGCKTH 561
V W ++ H
Sbjct: 486 VVSWSVMICSNAQH 499
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/597 (34%), Positives = 342/597 (57%), Gaps = 12/597 (2%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS-NCLINMYGKCGLLSSAQFV 133
N T + ++ A A + GKEIH M +G LNS +S LINMY KC ++ A +
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGF-LNSPLSITSLINMYSKCNQMNFALSI 94
Query: 134 F-DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
F D + E N ++ +++S + G G + + R GV +F+ + AC +
Sbjct: 95 FSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLE 154
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+K +IH L+FK LE D F+ L+N Y K ++ A F + + D+ W+A++ G
Sbjct: 155 IK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNG 211
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
YAQ+G+ ++ F +M ++PS T + VL FA + + GR +H +KMG+ S
Sbjct: 212 YAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSG 271
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V+N+++D Y KC+ +E++L+ F+ M E D+ SWN++++ H + + LL ML
Sbjct: 272 VAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLG 331
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN------VVIGSALVDMYAK 426
G P+L T + +L S + A+ G++ H ++ G + V++ +A++DMYAK
Sbjct: 332 AGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAK 391
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + DA VF+ +S+K++ SWN M++GY HG G EALE++S M E ++KP++ TF+GV
Sbjct: 392 CGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGV 451
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC H G V +G ++ M + ++P ++H V+ + GQ AYE + PIE
Sbjct: 452 LSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEA 511
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
N VVWR LL+ C+ HK VL AA+++ +PE +++++SNVY ++E +VR
Sbjct: 512 NPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRH 571
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
M++++++K GCSW EL+N +H F ++ A + ++ +N L+ L + GYVPD
Sbjct: 572 TMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLREHGYVPD 628
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 231/468 (49%), Gaps = 14/468 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLF-DEMPERNVISWSALISGFSQIGMPEV 59
M+ +GF + ++ L+ MY K +++N A +F D E NV +++A+ISGF G PE
Sbjct: 63 MLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEE 122
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+++ M + P+ +T+ A+ AC D K+IHG +++ GLEL+ + + L+N
Sbjct: 123 GFEFYQKMRNEGVIPDKFTFPCAIKACL---DVLEIKKIHGLLFKFGLELDVFIGSALVN 179
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y K GL+ AQ F+ R+ + W ++++ Y Q G+ L+ F V S F+
Sbjct: 180 CYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFT 239
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
VL AV+G+L G IH K + V+ LI++Y KC+ ++ A +F ++
Sbjct: 240 VTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR 299
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +W++++ + Q G + L +M +G+ P VT + VL A + + + GR+
Sbjct: 300 EKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGRE 359
Query: 300 LHSLIIKMGFSS------FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
+H +I G + N V+D Y+KC + ++ F+ M DV SWN +I G
Sbjct: 360 IHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMG 419
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ + EA+E+ M P+ T+ +L+ S + G+ +K +D
Sbjct: 420 YGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRN-FLVQMKSKYDVA 478
Query: 414 VVIG--SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
I + ++DM + G+L++A ++ + N V W +L H
Sbjct: 479 PTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLH 526
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 197/397 (49%), Gaps = 22/397 (5%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V + L+ Y+KF + AQ F+E+P R+V+ W+A+++G++QIG E+ L F
Sbjct: 166 GLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETF 225
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R M + P+ +T G +S A GD +G+ IHG + G + VSN LI+MYGKC
Sbjct: 226 RRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKC 285
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ A +F+ E++ SW S++S + QCG+H L++ +G+ + +VL
Sbjct: 286 KCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVL 345
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDK------FVAMGLINLYAKCEKLDLASRVFSNI 238
AC+ L L G +IH + L D + +I++YAKC + A VF +
Sbjct: 346 PACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERM 405
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +W+ +I GY G EA+++F +M L P EVTF VL A + GR
Sbjct: 406 SNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGR 465
Query: 299 QLHSLIIKMGFSSFTFVANT------VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALI 351
+ +++M S VA T V+D + L+E+ + M E + V W AL+
Sbjct: 466 ---NFLVQM--KSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Query: 352 AGHLASCHYGEAIELLKDMLFE---GHCPNLYTYSNI 385
A H A E+ +FE HC + SN+
Sbjct: 521 AACRLHKHAVLA-EVAAQRVFELEPEHCGSYVLMSNV 556
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/662 (31%), Positives = 355/662 (53%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
+G +V + L+ MY + DA+ FD MP R+ + W+ ++ G+ + G A+
Sbjct: 169 ATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVR 228
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
FR M EPN+ T +S CA+ D SG ++H + GLE V+N L++MY
Sbjct: 229 LFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYA 288
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KC L A +F+ + ++W ++S Q G L +F +SG + S
Sbjct: 289 KCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVS 348
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L A L LK G ++H + + + D F+ L+++Y KC + A ++ + D
Sbjct: 349 LLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAID 408
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ S +I GY G + +A+ +F + + P+ VT + VL A A + G+++H
Sbjct: 409 VVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHG 468
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
+++ + +V + ++D Y+KC L+ S F +M D V+WN++I+ + E
Sbjct: 469 YVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQE 528
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A++L + M EG N T S+ L+ + +PAI +GK+ H I+K +++ SAL+D
Sbjct: 529 ALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALID 588
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MYAKCG + A +VF+ + KN VSWN+++ Y HGL +E++ MQE KP+ T
Sbjct: 589 MYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVT 648
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F+ ++SAC H GLVEEG F M +++ I+PRM+H A +V L++ G+ +A +FI
Sbjct: 649 FLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADM 708
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
P +P+ +W LL C+ H+++ L A++++ DP ++ ++++SN+ A A WD +
Sbjct: 709 PFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVS 768
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
KVR++MK+ + K G SW ++ N H F S + + D++ + L L + GYVP
Sbjct: 769 KVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREEGYVP 828
Query: 663 DP 664
P
Sbjct: 829 RP 830
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 164/560 (29%), Positives = 283/560 (50%), Gaps = 7/560 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPER---NVISWSALISGFSQIGMPEVALNY 63
H ++ + LL MYV R DA +F +P + + W+ LI GF+ G +A+ +
Sbjct: 67 HNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLF 126
Query: 64 FRLMVC--CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M P+ +T V +CA+ G G+ +H +GL + +V + LI MY
Sbjct: 127 YVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMY 186
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
GLL A+ FD R+ + W ++ Y + G+ +++F R SG + + A
Sbjct: 187 SDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLA 246
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
L CA +L G+Q+HSL KC LE + VA L+++YAKC LD A R+F +
Sbjct: 247 CFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRD 306
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
DL W+ +I G Q G EA+ LF M SG P VT +L A D+ G+++H
Sbjct: 307 DLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVH 366
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
II+ F+ + ++D Y KC + + +D DVV + +I+G++ +
Sbjct: 367 GYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSE 426
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A+++ + +L + PN T +++L + I A+ G++ H +++ ++ + SAL+
Sbjct: 427 KALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALM 486
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAKCGRL+ + +F +S K+ V+WN+M+ ++Q+G +EAL+++ M IK N+
Sbjct: 487 DMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNV 546
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
T LSAC + + G +I+ I + ++++ ++A G A +
Sbjct: 547 TISSALSACASLPAIYYGKEIHGVIIKG-PIKADIFAESALIDMYAKCGNMELALRVFEF 605
Query: 542 SPIEPNKVVWRCLLSGCKTH 561
P + N+V W ++S H
Sbjct: 606 MP-DKNEVSWNSIISAYGAH 624
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 236/433 (54%), Gaps = 1/433 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G V N LL MY K ++DA +LF+ +P ++++W+ +ISG Q G+ + AL
Sbjct: 269 VKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEAL 328
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M+ P+ T V + A + GKE+HG + R+ + +++ + + L+++Y
Sbjct: 329 GLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIY 388
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + +A+ ++DA+ + + +++S Y G L++F + + + + A
Sbjct: 389 FKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVA 448
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SVL ACA + L +G +IH V + A E +V L+++YAKC +LDL+ +FS + L
Sbjct: 449 SVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLK 508
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D W+++I ++Q G+ EA+DLF +M G+ + VT S L A A + G+++H
Sbjct: 509 DEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIH 568
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+IIK + F + ++D Y+KC +E +L+ F+ M + + VSWN++I+ + A
Sbjct: 569 GVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVK 628
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA-L 420
E++ L M EG+ P+ T+ +++ + +E G Q C+ K + + A +
Sbjct: 629 ESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACM 688
Query: 421 VDMYAKCGRLNDA 433
VD+Y++ GRL+ A
Sbjct: 689 VDLYSRSGRLDKA 701
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 181/368 (49%), Gaps = 6/368 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + H + + L+ +Y K + A+ L+D +V+ S +ISG+ GM E A
Sbjct: 369 IIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKA 428
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR ++ ++PN T + ACAS G+EIHG + R+ E +V + L++M
Sbjct: 429 LQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDM 488
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L + ++F ++ ++W S++SS+ Q GE L +F G+ + +
Sbjct: 489 YAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTI 548
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S L ACA L + G +IH ++ K ++ D F LI++YAKC ++LA RVF +
Sbjct: 549 SSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPD 608
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W+++I Y G E++ +M G P VTF ++ A A G QL
Sbjct: 609 KNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQL 668
Query: 301 HSLIIKMGFSSFTFVA-NTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASC 358
+ K + ++D YS+ L+++++ +M + D W AL L +C
Sbjct: 669 FQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGAL----LHAC 724
Query: 359 HYGEAIEL 366
+EL
Sbjct: 725 RVHRNVEL 732
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/658 (32%), Positives = 360/658 (54%), Gaps = 3/658 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEV 59
+++ G N+ L+ +Y A+ +F + ++ W+ L++ ++ +
Sbjct: 221 IVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIE 280
Query: 60 ALNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
L F RL+ L+P+ +TY + AC+ G GK +H + +SG ++ V + +
Sbjct: 281 GLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAV 340
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY KC + A +FD ER+ SW +++S Y Q G+ L++F + SG
Sbjct: 341 GMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSV 400
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +V+ +CA L +L+ G +IH + + D FV+ L+++Y KC L++A VF I
Sbjct: 401 TLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQI 460
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
Q ++ +W+++I GY+ G + I+LF +M G+ P+ T S +L A + G+
Sbjct: 461 QRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGK 520
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H II+ + FV ++++D Y KC + + F M + +VVSWN +I+G++
Sbjct: 521 FIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVG 580
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
Y EA+ + DM G P+ T++++L S + +E GK+ H I++ + N V+
Sbjct: 581 SYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMG 640
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAKCG +++A +F+ L ++ VSW +M+ Y HG EAL+++ MQ++ KP
Sbjct: 641 ALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKP 700
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ +LSAC H GLV+EG +YFN MI ++G P ++H + ++ L G+ R AYE
Sbjct: 701 DKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEI 760
Query: 539 IKSSP-IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
++ +P I + + L S C HK L LG ++ DP+D S +I+LSN+YA
Sbjct: 761 LQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKK 820
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
WDE KVR +KE LKK+ GCSW E+ ++H F + Q ++E M+ L+ H+
Sbjct: 821 WDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHV 878
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/631 (34%), Positives = 362/631 (57%), Gaps = 7/631 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF +V N LL Y DA K+FDEMPER+ +SW+ +I S G E AL +F
Sbjct: 167 GFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFF 226
Query: 65 RLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS--NCLINM 120
R+MV ++P+ T V + CA D + +H + GL L HV N L+++
Sbjct: 227 RVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGL-LGGHVKVGNALVDV 285
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG +++ VFD ERN ISW ++++S+ G+++ L +F L G+ + +
Sbjct: 286 YGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTI 345
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L LG K+GM++H K A+E D F++ LI++YAK +AS +F+ + +
Sbjct: 346 SSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGV 405
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+A+I +A+ EA++L +M + G P+ VTF+ VL A A + G+++
Sbjct: 406 RNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEI 465
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ II++G S FV+N + D YSKC L + F+ + D VS+N LI G+ +
Sbjct: 466 HARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDS 524
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
E++ L +M G P++ ++ +++ +++ I GK+ H +V+ F +++ + ++L
Sbjct: 525 LESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSL 584
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+D+Y +CGR++ A KVF + +K++ SWNTM++GY G A+ ++ M+E+ ++ +
Sbjct: 585 LDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDS 644
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
+F+ VLSAC H GL+E+G YF M+ D I P H A +V L G A + I+
Sbjct: 645 VSFVAVLSACSHGGLIEKGRKYFK-MMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIR 703
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
I P+ +W LL C+ H ++ LG +AAE + P+ +I+LSN+YAEA WDE
Sbjct: 704 GLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDE 763
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
KVR++MK + KK+ GCSW ++ + +H F
Sbjct: 764 ANKVRELMKSRGAKKNPGCSWVQVGDLVHAF 794
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 174/654 (26%), Positives = 318/654 (48%), Gaps = 47/654 (7%)
Query: 5 GFHPNVITY-NHLLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPEVAL 61
GF P ++ L+L Y F +++ LF R+ W+ LI S G+ +
Sbjct: 64 GFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIAGVFD-GF 122
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ MV ++P+ TY + C+ + R G+E+HG ++ G + + V N L+ Y
Sbjct: 123 GTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFY 182
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFS 179
G CGL A VFD ER+ +SW +++ G + L F +++ K G+ +
Sbjct: 183 GNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVT 242
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLASRVFSN 237
SVL CA + + +H K L V +G L+++Y KC + +VF
Sbjct: 243 VVSVLPVCAETEDKVMARIVHCYALKVGL-LGGHVKVGNALVDVYGKCGSEKASKKVFDE 301
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
I ++ +W+A+I ++ GK +A+D+F M G+ P+ VT S +L ++ G
Sbjct: 302 IDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLG 361
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
++H +KM S F++N+++D Y+K + F++M ++VSWNA+IA +
Sbjct: 362 MEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARN 421
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA+EL++ M +G PN T++N+L + + + GK+ H I++ G ++ +
Sbjct: 422 RLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVS 481
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL DMY+KCG LN A+ VF+ +S ++ VS+N +++GY++ E+L ++S M+ ++
Sbjct: 482 NALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMR 540
Query: 478 PNDNTFIGVLSACVHIGLVEEG-------------WHYF--NSMIRDHGISPRMDHIASV 522
P+ +F+GV+SAC ++ + +G H F NS++ + R+D V
Sbjct: 541 PDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKV 600
Query: 523 VHL---------------FACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
+ + RG+ A +E +K +E + V + +LS C +
Sbjct: 601 FYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLI 660
Query: 565 VLGRYAAEKILSTDPEDTSAHIM-LSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
GR + + + E T H + ++ A + +E A +++ S+ DT
Sbjct: 661 EKGRKYFKMMCDLNIEPTHTHYACMVDLLGRAGLMEEAA---DLIRGLSIIPDT 711
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/665 (32%), Positives = 369/665 (55%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GFH ++ + L+ +Y I DA+++FDE+P R+ I W+ ++ G+ + G + A+ F
Sbjct: 142 GFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTF 201
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M N TY +S CA+RG+ +G ++HG + SG E + V+N L+ MY KC
Sbjct: 202 CEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKC 261
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L A+ +F+ + ++++W L++ Y Q G +F +GV + AS L
Sbjct: 262 GNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFL 321
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+ G+L+ ++HS + + + FD ++ LI++Y K +++A ++F L D+
Sbjct: 322 PSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVA 381
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+A+I GY G +AI+ F + G++ + +T + VL A A V G++LH I
Sbjct: 382 VCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHI 441
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K + V + + D Y+KC L+ + + F M + D V WN++I+ + AI
Sbjct: 442 LKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAI 501
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L + M G + + S+ L+ ++++PA+ +GK+ H +++ F S+ + S L+DMY
Sbjct: 502 DLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMY 561
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+KCG L A VF+ + KN VSWN+++ Y HG RE L++Y M I P+ TF+
Sbjct: 562 SKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFL 621
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
++SAC H GLV+EG HYF+ M R++GI RM+H A +V L+ G+ A++ IKS P
Sbjct: 622 VIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPF 681
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
P+ VW LL C+ H ++ L + A+ +L DP+++ +++LSNV+A+A W KV
Sbjct: 682 TPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKV 741
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDP 664
R +MKEK ++K G SW ++ H FS + + ++++ ++ L + L GYVP P
Sbjct: 742 RSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGNHPESVEIYLILKSLLLELRKQGYVPQP 801
Query: 665 IYSSH 669
H
Sbjct: 802 YLPLH 806
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 232/458 (50%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
+ +L +YV R DA LF E+ R + W+ +I G +G + AL ++ M+ +
Sbjct: 50 SRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVS 109
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT+ + AC + +H G ++ + LI +Y G + A+ V
Sbjct: 110 PDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRV 169
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD R++I W +L Y + G+ + + F R S ++ + +L CA GN
Sbjct: 170 FDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNF 229
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
G Q+H LV EFD VA L+ +Y+KC L A ++F+ + D W+ LI GY
Sbjct: 230 CAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGY 289
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q G EA LF M S+G+ P VTF+ L + + +++HS I++
Sbjct: 290 VQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDV 349
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
++ + ++D Y K +E + K F + DV A+I+G++ +AI + ++ E
Sbjct: 350 YLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQE 409
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G N T +++L + + A++ GK+ HC I+K ++ V +GSA+ DMYAKCGRL+ A
Sbjct: 410 GMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLA 469
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+ F +S ++ V WN+M+ ++Q+G A++++ M
Sbjct: 470 YEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQM 507
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 238/464 (51%), Gaps = 8/464 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF + N L+ MY K + A+KLF+ MP+ + ++W+ LI+G+ Q G + A
Sbjct: 239 VIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEA 298
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M+ ++P+ T+ + + G R KE+H + R + + ++ + LI++
Sbjct: 299 APLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDV 358
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+ +F ++ + +++S Y G ++ + F + G+ + +
Sbjct: 359 YFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTM 418
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASVL ACA + LK G ++H + K LE V + ++YAKC +LDLA F +
Sbjct: 419 ASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSD 478
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+++I ++Q GK AIDLF +M SG V+ S L A A++ G+++
Sbjct: 479 RDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEM 538
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +I+ FSS TFVA+T++D YSKC L + F+ MD + VSWN++IA +
Sbjct: 539 HGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCP 598
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSA 419
E ++L +ML G P+ T+ I++ ++ G HC + G + + +
Sbjct: 599 RECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYAC 658
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVS----WNTMLVGYAQHG 459
+VD+Y + GR+++A FD + S W T+L HG
Sbjct: 659 MVDLYGRAGRVHEA---FDTIKSMPFTPDAGVWGTLLGACRLHG 699
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 220/476 (46%), Gaps = 10/476 (2%)
Query: 85 ACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSIS 144
AC+ + +++H ++ G+ S+ ++ +Y CG A +F R ++
Sbjct: 20 ACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALP 79
Query: 145 WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF 204
W ++ G L + S V+ +++ V+ AC L N+ + M +H
Sbjct: 80 WNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTAR 139
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
D F LI LYA + A RVF + L D W+ ++ GY + G AI
Sbjct: 140 SLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIG 199
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
F +M +S M + VT++ +L A G QLH L+I GF VANT++ YS
Sbjct: 200 TFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYS 259
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
KC L + K F+ M + D V+WN LIAG++ + EA L M+ G P+ T+++
Sbjct: 260 KCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFAS 319
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
L + ++ K+ H IV+ +V + SAL+D+Y K G + ARK+F +
Sbjct: 320 FLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVD 379
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
+ M+ GY HGL +A+ + + + + N T VL AC + ++ G
Sbjct: 380 VAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPG----- 434
Query: 505 SMIRDHGISPRMDHI----ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+ H + R+++I +++ ++A G+ AYEF + + + V W ++S
Sbjct: 435 KELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-DRDSVCWNSMIS 489
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 2/168 (1%)
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
SD ++ +Q H ++ G S ++ +Y CGR DA +F L + + WN
Sbjct: 22 SDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWN 81
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
M+ G G AL Y M + + P+ TF V+ AC + V + R
Sbjct: 82 WMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPL-CMVVHDTARS 140
Query: 510 HGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G + ++++ L+A G R A P+ + ++W +L G
Sbjct: 141 LGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLR-DTILWNVMLRG 187
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/658 (32%), Positives = 360/658 (54%), Gaps = 3/658 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEV 59
+++ G N+ L+ +Y A+ +F + ++ W+ L++ ++ +
Sbjct: 29 IVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIE 88
Query: 60 ALNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
L F RL+ L+P+ +TY + AC+ G GK +H + +SG ++ V + +
Sbjct: 89 GLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAV 148
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY KC + A +FD ER+ SW +++S Y Q G+ L++F + SG
Sbjct: 149 GMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSV 208
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +V+ +CA L +L+ G +IH + + D FV+ L+++Y KC L++A VF I
Sbjct: 209 TLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQI 268
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
Q ++ +W+++I GY+ G + I+LF +M G+ P+ T S +L A + G+
Sbjct: 269 QRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGK 328
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H II+ + FV ++++D Y KC + + F M + +VVSWN +I+G++
Sbjct: 329 FIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVG 388
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
Y EA+ + DM G P+ T++++L S + +E GK+ H I++ + N V+
Sbjct: 389 SYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMG 448
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAKCG +++A +F+ L ++ VSW +M+ Y HG EAL+++ MQ++ KP
Sbjct: 449 ALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKP 508
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ +LSAC H GLV+EG +YFN MI ++G P ++H + ++ L G+ R AYE
Sbjct: 509 DKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEI 568
Query: 539 IKSSP-IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
++ +P I + + L S C HK L LG ++ DP+D S +I+LSN+YA
Sbjct: 569 LQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKK 628
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
WDE KVR +KE LKK+ GCSW E+ ++H F + Q ++E M+ L+ H+
Sbjct: 629 WDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHV 686
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 195/378 (51%), Gaps = 4/378 (1%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L C LK G IH + L+ + + LINLY C A VF I+ P
Sbjct: 8 SLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENP 67
Query: 242 -DLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+T W+ L+ + E +++F ++ L P T+ VL A + + G+
Sbjct: 68 LDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKM 127
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ +IK GF+ V ++ + Y+KC + E+++K FDEM E DV SWN +I+ +
Sbjct: 128 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 187
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A+EL ++M G P+ T + +++ + + +E GK+ H +V+ GF + + SA
Sbjct: 188 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSA 247
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMY KCG L A++VF+ + KN+VSWN+M+ GY+ G + +E++ M E I+P
Sbjct: 248 LVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPT 307
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
T +L AC ++ G +IR+ + + +S++ L+ G A
Sbjct: 308 LTTLSSILMACSRSVNLQLGKFIHGYIIRNR-VEADIFVNSSLIDLYFKCGNIGSAENVF 366
Query: 540 KSSPIEPNKVVWRCLLSG 557
++ P + N V W ++SG
Sbjct: 367 QNMP-KTNVVSWNVMISG 383
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/665 (33%), Positives = 351/665 (52%), Gaps = 5/665 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G ++ N L+ MY K I+DA+ +FD M ER++ SW+ +I G +Q G + A
Sbjct: 347 VNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAF 406
Query: 62 NYFRLMVCCVLEPNYYTYVGAV--SACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ F M PN TY+ + SA AS K +H +G + + N LI+
Sbjct: 407 SLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIH 466
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG + A+ VFD +R+ ISW +++ Q G +FL ++ G+ +
Sbjct: 467 MYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTT 526
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L L+ ++H + L D V I++Y +C +D A +F +
Sbjct: 527 YLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLS 586
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +T W+A+IGG AQ EA+ LF++M G +P TF +L A D + ++
Sbjct: 587 VRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKE 646
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+HS G V N ++ YSKC ++ + + FD+M E +V +W +I G LA
Sbjct: 647 VHSHATDAGLVDLR-VGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGG-LAQHG 704
Query: 360 YG-EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
G +A ML EG P+ TY +IL+ + A+EW K+ H V G S++ +G+
Sbjct: 705 CGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGN 764
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALV MYAKCG ++DAR VFD + +++ SW M+ G AQHG G EAL+ + M+ KP
Sbjct: 765 ALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKP 824
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N +++ VL+AC H GLV+EG F SM +D+GI P M+H +V L G A F
Sbjct: 825 NGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELF 884
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I + PIEP+ W LL C T+ +L + +AA++ L P+ S +++LSN+YA W
Sbjct: 885 ILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKW 944
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
++ VR +M+ K ++K+ G SW E+ N++H F + + +++ +N L L
Sbjct: 945 EQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAK 1004
Query: 659 GYVPD 663
GYVPD
Sbjct: 1005 GYVPD 1009
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/565 (31%), Positives = 295/565 (52%), Gaps = 9/565 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG N+ N LL +Y++ R+ A+++FD++ ++N+ W+ +I G+++ G E A
Sbjct: 144 IIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDA 203
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ + M +PN TY+ + AC + + GK+IH + +SG + + V L+NM
Sbjct: 204 MRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNM 263
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + AQ +FD +ERN ISW ++ G +FL ++ G + ++
Sbjct: 264 YVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTY 323
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L A A G L+ ++HS L D V L+++YAK +D A VF +
Sbjct: 324 VSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTE 383
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG--AFADVKETIGGR 298
D+ +W+ +IGG AQ G+ EA LF++M +G +P+ T+ +L A A +
Sbjct: 384 RDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVK 443
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H + GF S + N ++ Y+KC ++++ FD M + DV+SWNA++ G +
Sbjct: 444 VVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNG 503
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA + M EG P+ TY ++LN A+EW + H V+ G S+ +GS
Sbjct: 504 CGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGS 563
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
A + MY +CG ++DAR +FD LS +++ +WN M+ G AQ GREAL ++ MQ P
Sbjct: 564 AFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIP 623
Query: 479 NDNTFIGVLSACVHIGLVEEGW-HYFNSMIRDHG-ISPRMDHIASVVHLFACRGQTRRAY 536
+ TFI +LSA V +E W +S D G + R+ + ++VH ++ G + A
Sbjct: 624 DATTFINILSANVDEEALE--WVKEVHSHATDAGLVDLRVGN--ALVHTYSKCGNVKYAK 679
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTH 561
+ + +E N W ++ G H
Sbjct: 680 Q-VFDDMVERNVTTWTMMIGGLAQH 703
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 136/431 (31%), Positives = 233/431 (54%), Gaps = 2/431 (0%)
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
A+ ++ V + + ++YV + C + D K++H + +SG+E N +V+N L+
Sbjct: 102 AVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLR 161
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y +CG L A+ VFD L++N W +++ Y + G ++++ R+ +E +
Sbjct: 162 VYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEIT 221
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L AC NLK G +IH+ + + + D V L+N+Y KC ++ A +F +
Sbjct: 222 YLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMV 281
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+ +IGG A G+ EA LF++M G +P+ T+ +L A A ++
Sbjct: 282 ERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKE 341
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+HS + G + V N ++ Y+K ++++ FD M E D+ SW +I G
Sbjct: 342 VHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGR 401
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNIS--SDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA L M G PNL TY +ILN S + A+EW K H + GF S++ IG
Sbjct: 402 GQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIG 461
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL+ MYAKCG ++DAR VFD + ++++SWN M+ G AQ+G G EA ++ MQ+ +
Sbjct: 462 NALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLV 521
Query: 478 PNDNTFIGVLS 488
P+ T++ +L+
Sbjct: 522 PDSTTYLSLLN 532
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/323 (36%), Positives = 187/323 (57%), Gaps = 6/323 (1%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
+ G+AI FS ++L C ++ + Q+H + K +E + +VA L+ +Y +C +L
Sbjct: 111 QQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQ 170
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A +VF + ++ W+ +IGGYA+ G A +A+ ++ KM P+E+T+ +L A
Sbjct: 171 CARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
G+++H+ II+ GF S V +++ Y KC +E++ FD+M E +V+SW
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290
Query: 350 LIAGHLASCHYG---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
+I G LA HYG EA L M EG PN YTY +ILN ++ A+EW K+ H V
Sbjct: 291 MIGG-LA--HYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAV 347
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
G ++ +G+ALV MYAK G ++DAR VFD ++ +++ SW M+ G AQHG G+EA
Sbjct: 348 NAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFS 407
Query: 467 IYSMMQENKIKPNDNTFIGVLSA 489
++ MQ N PN T++ +L+A
Sbjct: 408 LFLQMQRNGCLPNLTTYLSILNA 430
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 152/304 (50%), Gaps = 4/304 (1%)
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
A +A+ + G+ ++ +L ++ + +Q+H IIK G +VAN
Sbjct: 99 AKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANK 158
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+L Y +C L+ + + FD++ + ++ W +I G+ H +A+ + M E PN
Sbjct: 159 LLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPN 218
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
TY +IL ++WGK+ H I++ GF S+V + +ALV+MY KCG + DA+ +FD
Sbjct: 219 EITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFD 278
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+ +N++SW M+ G A +G G+EA ++ MQ PN T++ +L+A G +E
Sbjct: 279 KMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE- 337
Query: 499 GW-HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
W +S + G++ + ++VH++A G A + E + W ++ G
Sbjct: 338 -WVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDA-RVVFDGMTERDIFSWTVMIGG 395
Query: 558 CKTH 561
H
Sbjct: 396 LAQH 399
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/673 (33%), Positives = 379/673 (56%), Gaps = 10/673 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SGF ++ + L+ + +F +DA+ +F++M RNV+S + L+ G + E A
Sbjct: 311 SGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKV 370
Query: 64 FRLMVCCVLEPNYYTYVGAVSACAS----RGDARSGKEIHGRMYRSGLELNS-HVSNCLI 118
F M V N +YV +SA + R G+E+H + R+GL N + N L+
Sbjct: 371 FHEMKDLV-GINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLV 429
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
NMY K G ++ A VF+ +E++S+SW SL+S Q + F R++G S F
Sbjct: 430 NMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNF 489
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S L +CA LG + +G QIH K L+ D V+ L+ LYA+ +VFS +
Sbjct: 490 TLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLM 549
Query: 239 QLPDLTAWSALIGGYAQL-GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
D +W+++IG + +A+ F++M G S VTF +L A + +
Sbjct: 550 PEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVS 609
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSWNALIAGHLA 356
Q+H+L++K S T + N +L Y KC + E K F M E D VSWN++I+G++
Sbjct: 610 HQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIH 669
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ +A++L+ M+ +G + +T++ IL+ + + +E G + H C ++ +S+VV+
Sbjct: 670 NELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVV 729
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
GSALVDMY+KCGR++ A + F+ + +N+ SWN+M+ GYA+HG G +AL++++ M +
Sbjct: 730 GSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQ 789
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P+ TF+GVLSAC H+G VEEG+ +F SM + +SPR++H + +V L G+
Sbjct: 790 PPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVG 849
Query: 537 EFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
+FI S P++PN ++WR +L C ++ LGR AAE +L +P++ +++L+N+YA
Sbjct: 850 DFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYAS 909
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
W++ AK R MKE ++KK+ GCSW +++ +H F + +++ + +L+
Sbjct: 910 GEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRK 969
Query: 655 LFDGGYVPDPIYS 667
+ D GY+P Y+
Sbjct: 970 MRDAGYIPQTKYA 982
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 165/575 (28%), Positives = 292/575 (50%), Gaps = 25/575 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF N+ N L+ +YV+ + AQKLFDEM RN+++W+ LISG++Q G P+ A
Sbjct: 98 IKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEAC 157
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDA--RSGKEIHGRMYRSGLELNSHVSNCLIN 119
FR MV PN+Y + A+ AC G + + G +IHG + ++ + V N LI+
Sbjct: 158 ARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLIS 217
Query: 120 MYGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS-- 176
MYG C + A+ VFD RNSISW S++S Y + G+ V +F +K G+ S
Sbjct: 218 MYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFK 277
Query: 177 --EFSCASVL-GACAVLG-NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
E++ S++ AC+ + L V Q+ + V K D +V+ L++ +A+ D A
Sbjct: 278 PNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAK 337
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV- 291
+F + + ++ + + L+ G + + A +F +M + S+ ++ +L AF++
Sbjct: 338 NIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD-SYVVLLSAFSEFS 396
Query: 292 ---KETIGGRQLHSLIIKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
+ GR++H+ +I+ G + + N +++ Y+K + ++ F+ M E D VSW
Sbjct: 397 VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSW 456
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
N+LI+G + +A E M G P+ +T + L+ + + I G+Q HC +K
Sbjct: 457 NSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLK 516
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG-REALE 466
G D++V + +AL+ +YA+ G + KVF + + VSWN+++ + +A++
Sbjct: 517 LGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVK 576
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
+ M + TFI +LSA + L E H ++++ + +S D A L
Sbjct: 577 YFLQMMRGGWGLSRVTFINILSAVSSLSLHEVS-HQIHALVLKYCLS---DDTAIGNALL 632
Query: 527 ACRGQTRRAYE----FIKSSPIEPNKVVWRCLLSG 557
+C G+ E F + S ++V W ++SG
Sbjct: 633 SCYGKCGEMNECEKIFARMSETR-DEVSWNSMISG 666
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 236/481 (49%), Gaps = 23/481 (4%)
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
+ +E+H + + G N +SN LIN+Y + G L SAQ +FD RN ++W L+S
Sbjct: 87 SEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 146
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG--NLKVGMQIHSLVFKCALE 209
Y Q G+ F ++G + ++ S L AC G K+G+QIH L+ K
Sbjct: 147 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 206
Query: 210 FDKFVAMGLINLYAKC-EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
D V LI++Y C + + A VF I + + +W+++I Y++ G A A DLF
Sbjct: 207 SDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSS 266
Query: 269 MFSSGL----MPSEVTF-SYVLGAFADVKETIGG-RQLHSLIIKMGFSSFTFVANTVLDF 322
M GL P+E TF S + A + V + Q+ + + K GF +V++ ++
Sbjct: 267 MQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSG 326
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
+++ L +++ F++M +VVS N L+ G L GEA + + + N +Y
Sbjct: 327 FARFGLTDDAKNIFEQMGVRNVVSMNGLMVG-LVKQKQGEAAAKVFHEMKDLVGINSDSY 385
Query: 383 SNILNISSDIPAIEW----GKQTHCCIVKPGFDSN-VVIGSALVDMYAKCGRLNDARKVF 437
+L+ S+ +E G++ H +++ G + N V IG+ LV+MYAK G + DA VF
Sbjct: 386 VVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVF 445
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ + K+ VSWN+++ G Q+ +A E + M+ P++ T I LS+C +
Sbjct: 446 ELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASL---- 501
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVH-LFACRGQTRRAYEFIKSSPIEP--NKVVWRCL 554
GW I G+ +D SV + L A +T E +K + P ++V W +
Sbjct: 502 -GWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSV 560
Query: 555 L 555
+
Sbjct: 561 I 561
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 122/235 (51%), Gaps = 10/235 (4%)
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
++ L S TF ++ + + R+LH IK GF F++NT+++ Y + L
Sbjct: 64 NTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLG 123
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI-- 388
+ K FDEM ++V+W LI+G+ + EA +DM+ G PN Y + + L
Sbjct: 124 SAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQ 183
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC-GRLNDARKVFDHLSSKNLVS 447
S + G Q H I K + S+VV+ + L+ MY C NDAR VFD + +N +S
Sbjct: 184 ESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSIS 243
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKI----KPNDNTFIGVL-SAC--VHIGL 495
WN+++ Y++ G A +++S MQ+ + KPN+ TF ++ +AC V GL
Sbjct: 244 WNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGL 298
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/668 (30%), Positives = 360/668 (53%), Gaps = 1/668 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N + L+ Y+++ +I+ KLFD + +++ + W+ +++G+++ G + + F
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+M + PN T+ +S CAS+ G ++HG + SG++ + N L++MY KC
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G A +F ++++W ++S Y Q G L F SGV + +S+L
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+ + NL+ QIH + + ++ D F+ LI+ Y KC + +A +FS D+
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 407
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
++A+I GY G +++++F + + P+E+T +L + GR+LH I
Sbjct: 408 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI 467
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK GF + + V+D Y+KC + + + F+ + + D+VSWN++I S + AI
Sbjct: 468 IKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAI 527
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ + M G C + + S L+ +++P+ +GK H ++K S+V S L+DMY
Sbjct: 528 DIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMY 587
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTF 483
AKCG L A VF + KN+VSWN+++ HG +++L ++ M++++ I+P+ TF
Sbjct: 588 AKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITF 647
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ ++S+C H+G V+EG +F SM D+GI P+ +H A VV LF G+ AYE +KS P
Sbjct: 648 LEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMP 707
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
P+ VW LL C+ HK++ L A+ K++ DP ++ ++++SN +A A W+ K
Sbjct: 708 FPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTK 767
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
VR +MKE+ ++K G SW E+ + H F + + ++ ++N L L GY+P
Sbjct: 768 VRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQ 827
Query: 664 PIYSSHFE 671
P H E
Sbjct: 828 PYLPLHPE 835
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 155/566 (27%), Positives = 295/566 (52%), Gaps = 4/566 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER--NVISWSALISGFSQIGMPE 58
+I + + T +L MY +D K+F + R ++ W+++IS F + G+
Sbjct: 61 LIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLN 120
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
AL ++ M+C + P+ T+ V AC + + + + + G++ N V++ LI
Sbjct: 121 QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLI 180
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
Y + G + +FD L+++ + W +L+ Y +CG +K F + R ++ +
Sbjct: 181 KAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAV 240
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ VL CA + +G+Q+H LV ++F+ + L+++Y+KC + D AS++F +
Sbjct: 241 TFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM 300
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D W+ +I GY Q G E++ F +M SSG++P +TFS +L + + + +
Sbjct: 301 SRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCK 360
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H I++ S F+ + ++D Y KC + + F + + DVV + A+I+G+L +
Sbjct: 361 QIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNG 420
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
Y +++E+ + ++ PN T +IL + + A++ G++ H I+K GFD+ IG
Sbjct: 421 LYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGC 480
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
A++DMYAKCGR+N A ++F+ LS +++VSWN+M+ AQ A++I+ M + I
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY 540
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ + LSAC ++ G MI+ H ++ + ++++ ++A G + A
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNV 599
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDL 564
K+ E N V W +++ C H L
Sbjct: 600 FKTMK-EKNIVSWNSIIAACGNHGKL 624
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 152/570 (26%), Positives = 266/570 (46%), Gaps = 42/570 (7%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS-AQFVFDASLERN 141
+ AC++ R GK++H + + + +S+ ++ MY CG S + + L R+
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS 101
Query: 142 SI-SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA--ISEFSCASVLGACAVLGNLKVGMQ 198
SI W S++SS+ + G L + GV+ +S F C ++ AC L N K
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPC--LVKACVALKNFKGIDF 159
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+ V ++ ++FVA LI Y + K+D+ S++F + D W+ ++ GYA+ G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
I F M + P+ VTF VL A G QLH L++ G + N+
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+L YSKC +++ K F M D V+WN +I+G++ S E++ +M+ G P+
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T+S++L S +E+ KQ HC I++ ++ + SAL+D Y KC ++ A+ +F
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+S ++V + M+ GY +GL ++LE++ + + KI PN+ T + +L + I L +
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV-IGILLALK 458
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI----KSSPIEPNKVVWRCL 554
+ I G R + +V+ ++A G+ AYE K + N ++ RC
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCA 518
Query: 555 LSGCKTHKDLVLGRY-------------AAEKILSTDPEDTSA---------HIMLSNVY 592
S + + + AA + P ++ H + S+VY
Sbjct: 519 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVY 578
Query: 593 AEANMWDETAK---------VRKIMKEKSL 613
+E+ + D AK V K MKEK++
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMKEKNI 608
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 180/378 (47%), Gaps = 6/378 (1%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-- 240
+L AC+ L+ G Q+H+ + ++ D + ++ +YA C ++F + L
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ W+++I + + G +A+ + KM G+ P TF ++ A +K G L
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
+ +G FVA++++ Y + ++ K FD + + D V WN ++ G+
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
I+ M + PN T+ +L++ + I+ G Q H +V G D I ++L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MY+KCGR +DA K+F +S + V+WN M+ GY Q GL E+L + M + + P+
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVH-LFACRGQTRRAYEFI 539
TF +L + +E ++R H IS + ++++ F CRG + F
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMR-HSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 540 KSSPIEPNKVVWRCLLSG 557
+ + ++ VV+ ++SG
Sbjct: 400 QCNSVD--VVVFTAMISG 415
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI +V + + L+ MY K + A +F M E+N++SW+++I+ G + +
Sbjct: 568 MIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDS 627
Query: 61 LNYFRLMV-CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-----GLELNSHVS 114
L F MV + P+ T++ +S+C GD G R +RS G++
Sbjct: 628 LCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGV----RFFRSMTEDYGIQPQQEHY 683
Query: 115 NCLINMYGKCGLLSSA 130
C+++++G+ G L+ A
Sbjct: 684 ACVVDLFGRAGRLTEA 699
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 110/264 (41%), Gaps = 40/264 (15%)
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
S +L S+ + GKQ H ++ + ++ MYA CG +D K+F L
Sbjct: 39 SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 98
Query: 443 K--NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+ ++ WN+++ + ++GL +AL Y M + P+ +TF ++ ACV + +G
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF-KGI 157
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFACRGQTR--------------------------- 533
+ + + G+ +S++ + G+
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 534 -------RAYEFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPEDTSA 584
+ + ++ I PN V + C+LS C K DL + + + D E +
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 585 HIMLSNVYAEANMWDETAKVRKIM 608
+ +LS +Y++ +D+ +K+ ++M
Sbjct: 278 NSLLS-MYSKCGRFDDASKLFRMM 300
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/665 (33%), Positives = 356/665 (53%), Gaps = 3/665 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF + + LL MY + S ++DA K FD MP R+V++WS+++ F Q G
Sbjct: 126 VIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEG 185
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ +EP+ T + AC+ G R G+ +HG + R +E N+ ++N LI M
Sbjct: 186 LDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVM 245
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGK G L SA+ +F+ R + W ++S Y Q G L +F ++ + ++ +
Sbjct: 246 YGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTM 305
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFD-KFVAMGLINLYAKCEKLDLASRVFSNIQ 239
VL ACA LG +K G +H V + A++ + F+ L+ LYA L +VF I+
Sbjct: 306 VGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIK 365
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+ LI + + G+ EA+ LFV+M + GLMP + + L A + + G Q
Sbjct: 366 EKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQ 425
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H IIK G + FV N ++D Y+KC + + K F+++ E +V+WN++I G + +
Sbjct: 426 IHGYIIKTGNFN-DFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGY 484
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EAI L M + T+ +++ S + +E GK H ++ G + + +A
Sbjct: 485 SVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTA 544
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L DMY+KCG L A VFD +S +++VSW+ M+ GY HG + +++ M + IKPN
Sbjct: 545 LTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPN 604
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
D TF+ +LSAC H G VEEG YFNSM + G+ P+ DH A +V L + G AY+ I
Sbjct: 605 DITFMHILSACSHAGAVEEGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQII 663
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
S P N +W LL+GC+ HK + + + + +L D DT + +LSN+YAE WD
Sbjct: 664 TSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWD 723
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ KVR +MK K L+K G S E+ K++ F + Q D++ + +
Sbjct: 724 KFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQV 783
Query: 660 YVPDP 664
Y +P
Sbjct: 784 YDSEP 788
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 164/593 (27%), Positives = 287/593 (48%), Gaps = 36/593 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +G H + L+ Y + ++++FD P+ + W LI + G E A
Sbjct: 24 LFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEA 83
Query: 61 LNYFRLMVCC-VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
++ + MV + + + + + AC+ GD G ++HGR+ + G E ++ V L+
Sbjct: 84 VSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLC 143
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MYG+ L A FD R+ ++W S++ ++ Q G+ GL +F V +
Sbjct: 144 MYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVT 203
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV AC+ LG+L++G +H V + +E + + LI +Y K L A R+F N+
Sbjct: 204 MLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVP 263
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
W+ +I Y Q G EA+++F KM + P++VT VL A A + GR
Sbjct: 264 CRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRS 323
Query: 300 LHSLIIKMGFS-SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H +I+ F+ +++ Y+ L + K F+ + E ++SWN LI+ +
Sbjct: 324 VHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNG 383
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA+ L M +G P+ Y+ ++ L+ I + G Q H I+K G + N + +
Sbjct: 384 QPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQN 442
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAKCG ++ A K+F+ + K+LV+WN+M+ G++Q+G EA+ ++ M N +K
Sbjct: 443 ALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKM 502
Query: 479 NDNTFIGVLSACVHIGLVEEG-W-------------HYFNSMIRD-----------HGIS 513
+ TF+ V+ AC H+G +E+G W Y ++ + D HG+
Sbjct: 503 DKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVF 562
Query: 514 PRMDHIASV-----VHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRCLLSGC 558
RM + V + + GQ T + + S I+PN + + +LS C
Sbjct: 563 DRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSAC 615
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 223/466 (47%), Gaps = 11/466 (2%)
Query: 97 EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
++H ++ +GL + S LI Y + G+ S++ VFD + +S W L+ Y G
Sbjct: 19 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 78
Query: 157 EHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
+ ++ + + IS F SVL AC+ G+L VG ++H V KC E D V
Sbjct: 79 FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVE 138
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L+ +Y + LD A + F + + D+ AWS+++ + Q G+A E +D+F +M S +
Sbjct: 139 TSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVE 198
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P VT V A +++ GR +H +++ S + N+++ Y K L + +
Sbjct: 199 PDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERL 258
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F+ + W +I+ + S + EA+ + M PN T +L + + +
Sbjct: 259 FENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRV 318
Query: 396 EWGKQTHCCIVKPGFDSNV-VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
+ G+ H +++ D + +G AL+++YA G L D KVF+ + K ++SWNT++
Sbjct: 319 KEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISI 378
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
+ ++G EAL ++ MQ + P+ + LSAC I + G +I+ +
Sbjct: 379 FTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFND 438
Query: 515 RMDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ + +++ ++A G + +E IK E + V W ++ G
Sbjct: 439 FVQN--ALIDMYAKCGFVHSANKMFEKIK----EKSLVTWNSMICG 478
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/667 (31%), Positives = 369/667 (55%), Gaps = 1/667 (0%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H N ++ N ++ YVK + +A+KLFD M ER ++W+ LI G+SQ+ + A F
Sbjct: 80 HKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQ 139
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M C EP+Y T+V +S C ++ ++ + G + V N L++ Y K
Sbjct: 140 MQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNR 199
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A +F E +S+S+ ++++ Y + G + +F+ + SG+ +EF+ A+VL A
Sbjct: 200 LDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCA 259
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
L ++ +G QIHS V K ++ FV+ L++ Y+K + + A ++F + D ++
Sbjct: 260 NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSY 319
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ +I GYA GK A DLF ++ + + F+ +L ++ + GRQ+H+ I
Sbjct: 320 NVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIV 379
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
S V N+++D Y+KC EE+ F + V W A+I+ ++ Y E ++L
Sbjct: 380 TTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQL 439
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M + T++++L S+ I ++ GKQ H I+K GF SNV GSAL+D+YAK
Sbjct: 440 FNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAK 499
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + DA + F + +N+VSWN M+ YAQ+G L+ + M + ++P+ +F+GV
Sbjct: 500 CGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGV 559
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC H GLVEEG +FNSM + + + PR +H ASVV + G+ A + + PI+P
Sbjct: 560 LSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDP 619
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP-EDTSAHIMLSNVYAEANMWDETAKVR 605
++++W +L+ C+ HK+ L R AA+++ + + D + ++ +SN+YA A W+ +KV
Sbjct: 620 DEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVH 679
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPI 665
K M+++ +KK SW E++++ H FS + Q ++ + ++ L+ + + GY PD
Sbjct: 680 KAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTS 739
Query: 666 YSSHFEE 672
+ H E+
Sbjct: 740 CALHNED 746
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 261/520 (50%), Gaps = 37/520 (7%)
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
V++ N T++ + S + + I R+ ++G + ++ SN + + K G LS A
Sbjct: 12 VMKKNVSTFLKSSSLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQA 71
Query: 131 -------------------------------QFVFDASLERNSISWVSLLSSYCQCGEHV 159
+ +FD +ER +++W L+ Y Q +
Sbjct: 72 RQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFK 131
Query: 160 HGLKIFLLSRKSGVAISEFSCASVLGACA--VLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
++F+ ++ G + ++L C +GN Q+ + + K + V
Sbjct: 132 EAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQIT--QVQTQIIKLGYDSRLIVGNT 189
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
L++ Y K +LDLA ++F + D +++A+I GY++ G +A++LFV+M +SGL P+
Sbjct: 190 LVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPT 249
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
E TF+ VL A + + + G+Q+HS +IK F FV+N +LDFYSK + + ++ K FD
Sbjct: 250 EFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFD 309
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
EM E D VS+N +I+G+ + A +L +++ F + ++ +L+I+S+ E
Sbjct: 310 EMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEM 369
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
G+Q H + DS +++G++LVDMYAKCG+ +A +F +L+ ++ V W M+ Y Q
Sbjct: 370 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQ 429
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
G E L++++ M++ + + TF +L A I + G +S I G +
Sbjct: 430 KGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLG-KQLHSFIIKSGFMSNVF 488
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++++ ++A G + A + + P + N V W ++S
Sbjct: 489 SGSALLDVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMISA 527
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/480 (28%), Positives = 250/480 (52%), Gaps = 9/480 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ +I N L+ Y K +R++ A +LF EMPE + +S++A+I+G+S+ G+ E A
Sbjct: 175 IIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKA 234
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+N F M L+P +T+ + A D G++IH + ++ N VSN L++
Sbjct: 235 VNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDF 294
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K + A+ +FD E++ +S+ ++S Y G+H + +F + + +F
Sbjct: 295 YSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPF 354
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A++L + + ++G QIH+ + + V L+++YAKC K + A +F+N+
Sbjct: 355 ATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTH 414
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
W+A+I Y Q G E + LF KM + ++ + TF+ +L A A + G+QL
Sbjct: 415 RSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQL 474
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS IIK GF S F + +LD Y+KC ++++++TF EM + ++VSWNA+I+ + +
Sbjct: 475 HSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEA 534
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE---WGKQTHCCIVKPGFDSNVVIG 417
++ K+M+ G P+ ++ +L+ S +E W + I K D
Sbjct: 535 EATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYK--LDPRREHY 592
Query: 418 SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVG---YAQHGLGREALEIYSMMQE 473
+++VDM + GR N+A K+ + + + W+++L + L R A + M+E
Sbjct: 593 ASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEE 652
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/670 (31%), Positives = 361/670 (53%), Gaps = 1/670 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G+ + N LL MY K + A+++F + R+V+S++ ++ ++Q +
Sbjct: 154 IIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKEC 213
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + P+ TY+ + A + GK IH GL + V L+ M
Sbjct: 214 LGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTM 273
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+CG + SA+ F +R+ + + +L+++ Q G +V + + R GVA++ +
Sbjct: 274 CVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTY 333
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L AC+ L+ G IHS + + D + LI++YA+C L A +F +
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPK 393
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL +W+A+I GYA+ EA+ L+ +M S G+ P VTF ++L A A+ G+ +
Sbjct: 394 RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMI 453
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H I++ G S +AN +++ Y +C L E+ F+ DV+SWN++IAGH Y
Sbjct: 454 HEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY 513
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A +L ++M E P+ T++++L+ + A+E GKQ H I + G +V +G+AL
Sbjct: 514 ETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNAL 573
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
++MY +CG L DAR VF L ++++SW M+ G A G +A+E++ MQ +P D
Sbjct: 574 INMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPD 633
Query: 481 -NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+TF +LSAC H GLV EG+ F+SM ++G+ P ++H +V L + + A I
Sbjct: 634 GSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLI 693
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
P P+ VW LL C+ H ++ L +AA L + + + +I+LSNVYA A WD
Sbjct: 694 NQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWD 753
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ AK+R++M+ + ++K+ G SW E+ N +H F + + + +++ + +LSV + + G
Sbjct: 754 DVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAG 813
Query: 660 YVPDPIYSSH 669
Y PD + H
Sbjct: 814 YFPDTQHVLH 823
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/559 (30%), Positives = 300/559 (53%), Gaps = 4/559 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ +G P++ N L+ MYVK + DA ++F EMP R+VISW++LIS ++Q G + A
Sbjct: 53 MVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKA 112
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M PN TY+ ++AC S + +GK+IH ++ ++G + + V N L++M
Sbjct: 113 FQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSM 172
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG L A+ VF R+ +S+ ++L Y Q L +F G++ + +
Sbjct: 173 YGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTY 232
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++L A L G +IH L + L D V L+ + +C +D A + F I
Sbjct: 233 INLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIAD 292
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ ++ALI AQ G EA + + +M S G+ + T+ +L A + K G+ +
Sbjct: 293 RDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLI 352
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS I + G SS + N ++ Y++C L ++ + F M + D++SWNA+IAG+
Sbjct: 353 HSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDR 412
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
GEA+ L K M EG P T+ ++L+ ++ A GK H I++ G SN + +AL
Sbjct: 413 GEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANAL 472
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
++MY +CG L +A+ VF+ +++++SWN+M+ G+AQHG A +++ MQ +++P++
Sbjct: 473 MNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF VLS C + +E G + I + G+ ++ ++++++ G + A
Sbjct: 533 ITFASVLSGCKNPEALELGKQ-IHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFH 591
Query: 541 SSPIEPNKVV-WRCLLSGC 558
S ++ V+ W ++ GC
Sbjct: 592 S--LQHRDVMSWTAMIGGC 608
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 165/539 (30%), Positives = 263/539 (48%), Gaps = 35/539 (6%)
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
E + TYV + C + K IH +M +G+ + +SN LINMY KC + A
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VF R+ ISW SL+S Y Q G ++F + +G ++ + S+L AC
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L+ G +IHS + K + D V L+++Y KC L A +VF+ I D+ +++ ++G
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
YAQ E + LF +M S G+ P +VT+ +L AF G+++H L ++ G +S
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD 263
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V ++ +C ++ + + F + + DVV +NALIA H EA E M
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRS 323
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+G N TY +ILN S A+E GK H I + G S+V IG+AL+ MYA+CG L
Sbjct: 324 DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPK 383
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
AR++F + ++L+SWN ++ GYA+ EA+ +Y MQ +KP TF+ +LSAC +
Sbjct: 384 ARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACAN 443
Query: 493 IGLVEEGWHYFNSMIRD-----------------------------HGISPRMDHIA--S 521
+G ++R G R D I+ S
Sbjct: 444 SSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNS 502
Query: 522 VVHLFACRGQTRRAYEF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILST 577
++ A G AY+ +++ +EP+ + + +LSGCK + L LG+ +I +
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES 561
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/628 (34%), Positives = 355/628 (56%), Gaps = 3/628 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF +V N LLL Y + D +++FDEM ER+V+SW+++I FS G A++ F
Sbjct: 37 GFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLF 96
Query: 65 -RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+ + PN + V + CA D +G++IH + ++GL+ V N L+++YGK
Sbjct: 97 CEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGK 156
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + ++ VFD ERN +SW ++++S + L++F L GV + + +S+
Sbjct: 157 CGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSM 216
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L L G +IH + LE D FVA LI++YAK + AS VF+ I ++
Sbjct: 217 LPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNI 276
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+A++ +AQ A+DL +M + G +P+ VTF+ VL A A + G+++H+
Sbjct: 277 VSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHAR 336
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
I+ G S FV+N + D Y+KC L + + F ++ D VS+N LI G+ + + E+
Sbjct: 337 AIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSES 395
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ L +M +G ++ +Y +++ +++ A++ GK+ H V+ +++ I +AL+D
Sbjct: 396 LRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDF 455
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y KCGR++ A KVF + S++ SWN+M++GY G A+ ++ M+E+ ++ + ++
Sbjct: 456 YIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSY 515
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
I VLSAC H GLVEEG YF M + I P H A +V L G A + I+S P
Sbjct: 516 IAVLSACSHGGLVEEGKKYFEHM-QVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLP 574
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
IEP+ VW LL C+ H + L +AAE + P+ + + +LSN+YAEA WDE +
Sbjct: 575 IEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQ 634
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYF 631
VRK+MK + KK+ GCSW ++ N++H F
Sbjct: 635 VRKLMKSRGAKKNPGCSWVQIDNQVHAF 662
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/435 (31%), Positives = 241/435 (55%), Gaps = 2/435 (0%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
+T+ + ACA + G+EIHG +++ G + + V N L+ YG CG L + VFD
Sbjct: 8 HTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDE 67
Query: 137 SLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKV 195
LER+ +SW S++ + G + + +F ++ +SG + S SVL CA L +
Sbjct: 68 MLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVT 127
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G QIH V K L+ V L+++Y KC + + RVF I + +W+A+I A
Sbjct: 128 GRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAY 187
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
L + +A+++F M G+ P+ VTFS +L ++K G+++H ++ G S FV
Sbjct: 188 LERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFV 247
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
AN ++D Y+K ++ F+++ E ++VSWNA++A + A++L++ M +G
Sbjct: 248 ANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGE 307
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
PN T++N+L + I + GK+ H ++ G ++ + +AL DMYAKCG LN AR+
Sbjct: 308 IPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARR 367
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
VF +S ++ VS+N +++GY+Q E+L ++ M +K + +++GV+SAC ++
Sbjct: 368 VF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAA 426
Query: 496 VEEGWHYFNSMIRDH 510
+++G +R H
Sbjct: 427 LKQGKEVHGLAVRKH 441
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 143/491 (29%), Positives = 250/491 (50%), Gaps = 8/491 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G V N L+ +Y K + D++++FDE+ ERN +SW+A+I+ + + + A
Sbjct: 135 VVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDA 194
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FRLM+ ++PN T+ + GKEIHG R GLE + V+N LI+M
Sbjct: 195 LEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDM 254
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G A VF+ E+N +SW ++++++ Q + + + + G + +
Sbjct: 255 YAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTF 314
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL ACA +G L+ G +IH+ + D FV+ L ++YAKC L+LA RVF I L
Sbjct: 315 TNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISL 373
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +++ LI GY+Q E++ LF++M G+ V++ V+ A A++ G+++
Sbjct: 374 RDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEV 433
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L ++ + F+AN +LDFY KC ++ + K F ++ D SWN++I G+
Sbjct: 434 HGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGEL 493
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
AI L + M +G + +Y +L+ S +E GK+ + + + +
Sbjct: 494 TIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACM 553
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN--KIK 477
VD+ + G + +A K+ + L + W +L HG +E+ E+ K+K
Sbjct: 554 VDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGY----IELAHWAAEHLFKLK 609
Query: 478 PNDNTFIGVLS 488
P + + VLS
Sbjct: 610 PQHSGYYSVLS 620
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 187/338 (55%), Gaps = 1/338 (0%)
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
GV + + + VL ACA +++ G +IH +VFK + D FV L+ Y C L
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFAD 290
RVF + D+ +W+++IG ++ G EAI LF +M SG P+ V+ VL A
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+++ + GRQ+H ++K G S V N ++D Y KC +++S + FDE+ E + VSWNA+
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
I +A+E+ + M+ G PN T+S++L + ++ ++GK+ H ++ G
Sbjct: 182 ITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGL 241
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
+S++ + +AL+DMYAK GR A VF+ + KN+VSWN M+ +AQ+ L A+++
Sbjct: 242 ESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQ 301
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
MQ + PN TF VL AC IG + G IR
Sbjct: 302 MQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIR 339
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 158/285 (55%), Gaps = 3/285 (1%)
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G+ + TF +VL A AD GR++H ++ K+GF S FV NT+L FY C L++
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM-LFEGHCPNLYTYSNILNISSD 391
+ FDEM E DVVSWN++I Y EAI L +M L G PN+ + ++L + +
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ G+Q HC +VK G DS V +G+ALVD+Y KCG + D+R+VFD +S +N VSWN +
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
+ A ++ALE++ +M + +KPN TF +L V + L + G +R G
Sbjct: 182 ITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLR-FG 240
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+ + +++ ++A G++ +A E N V W +++
Sbjct: 241 LESDIFVANALIDMYAKSGRSLQASNVFNQIG-EKNIVSWNAMVA 284
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/663 (30%), Positives = 358/663 (53%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +G + + L+ ++ ++ +++A ++F+ + ++ + + ++ GF+++ + A
Sbjct: 60 IFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKA 119
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F M +EP Y + + C + R GKEIHG + +SG L+ L NM
Sbjct: 120 LKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + A+ VFD ER+ +SW ++++ Y Q G L++ L + + S +
Sbjct: 180 YAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITI 239
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A + L +++G +IH + + +A L+++YAKC L A +F +
Sbjct: 240 VSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLE 299
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+++I Y Q EA+ +F KM G+ P++V+ L A AD+ + GR +
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L +++ V N+++ Y KC+ ++ + F ++ +VSWNA+I G +
Sbjct: 360 HKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRP 419
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ M P+ +TY +++ +++ K H +++ D NV + +AL
Sbjct: 420 IEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTAL 479
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAKCG + AR +FD +S +++ +WN M+ GY HG+G+ ALE++ MQ+ I+PN
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNG 539
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ V+SAC H GLVE G F+ M ++ I P MDH ++V L G+ A++FI
Sbjct: 540 VTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIM 599
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
P++P V+ +L C+ HK++ AE++ +PED H++L+N+Y A+MW++
Sbjct: 600 QMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEK 659
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
+VR M + L+K GCS E++N++H F + A ++ + +L + + GY
Sbjct: 660 VGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGY 719
Query: 661 VPD 663
VPD
Sbjct: 720 VPD 722
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 253/503 (50%), Gaps = 10/503 (1%)
Query: 72 LEPNYYTYVGAV--SACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
+ N Y + A+ C+S + R I ++++GL L++++ + G +
Sbjct: 31 IPANVYEHPAALLLERCSSLKELR---HILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDE 87
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A VF+ ++ ++ + ++L + + + LK F+ R V ++ +L C
Sbjct: 88 AARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGD 147
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
L+VG +IH L+ K D F GL N+YAKC ++ A +VF + DL +W+ +
Sbjct: 148 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTI 207
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
+ GY+Q G A A+++ M L PS +T VL A + ++ G+++H ++ GF
Sbjct: 208 VAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGF 267
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
S +A ++D Y+KC L+ + FD M E +VVSWN++I ++ + + EA+ + +
Sbjct: 268 DSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQK 327
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
ML EG P + L+ +D+ +E G+ H V+ D NV + ++L+ MY KC
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKE 387
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
++ A +F L S+ +VSWN M++G+AQ+G EAL +S MQ +KP+ T++ V++A
Sbjct: 388 VDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITA 447
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
+ + + + ++ + + + ++V ++A G A I E +
Sbjct: 448 IAELSITHHA-KWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVT 505
Query: 550 VWRCLLSGCKTHKDLVLGRYAAE 572
W ++ G TH +G+ A E
Sbjct: 506 TWNAMIDGYGTHG---IGKAALE 525
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/656 (32%), Positives = 368/656 (56%), Gaps = 6/656 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY+K + + ++F+ MP++NV++W++L++G + M + F M + PN
Sbjct: 141 LVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPN 200
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
+T+ +SA AS+G G+ +H + + G + V N L+NMY KCGL+ A+ VF+
Sbjct: 201 PFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFN 260
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
R+ +SW +L++ + L++F SR + +++ + A+V+ CA L L +
Sbjct: 261 WMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLAL 320
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS-NIQLPDLTAWSALIGGYA 254
Q+HS V K V L + Y+KC +L A +FS ++ +W+A+I G
Sbjct: 321 ARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCI 380
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q G A+ LF +M +MP+E T+S +L A +I Q+H+ +IK +
Sbjct: 381 QNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA----SLSILPPQIHAQVIKTNYQHIPS 436
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V +L YSK E++L F +++ DVV+W+A+++ H + A L M +G
Sbjct: 437 VGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQG 496
Query: 375 HCPNLYTYSNILNISSDIPA-IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN +T S++++ + A ++ G+Q H +K + + + SALV MY++ G ++ A
Sbjct: 497 IKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA 556
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+ VF+ + ++LVSWN+M+ GYAQHG +A+E + M+ + I+ + TF+ V+ C H
Sbjct: 557 QIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHN 616
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLV EG YF+SM+RDH I+P M+H A +V L++ G+ I+ P +VWR
Sbjct: 617 GLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRT 676
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL C+ HK++ LG+++A+K+LS +P D+S +++LSN+YA A W E +VRK+M + +
Sbjct: 677 LLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKV 736
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
KK+ GCSW +++NK+H F + +++ + + L GY P+ + H
Sbjct: 737 KKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLH 792
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 217/436 (49%), Gaps = 21/436 (4%)
Query: 130 AQFVFDASLERNS-ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A++ D R++ + +L Y + G L F ++R+ GV + + + VL AC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVA-MGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ + +G Q+H L KC + + A L+++Y KC + VF + ++ W+
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+L+ G A E + LF +M + G+ P+ TF+ VL A A G+++H+ +K
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKF 230
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG-HLASCHYGEAIEL 366
G S FV N++++ Y+KC L+E++ F+ M+ D+VSWN L+AG L C EA++L
Sbjct: 231 GCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECEL-EALQL 289
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+ TY+ ++ + +++ + +Q H C++K GF + +AL D Y+K
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSK 349
Query: 427 CGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
CG L DA +F + S+N+VSW ++ G Q+G A+ ++S M+E+++ PN+ T+
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSA 409
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV----VHLFACRGQTRRAYEFIKS 541
+L A + I I I HI SV + ++ G T A K
Sbjct: 410 MLKASLSI---------LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKM 460
Query: 542 SPIEPNKVV-WRCLLS 556
IE VV W +LS
Sbjct: 461 --IEQKDVVAWSAMLS 474
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 220/453 (48%), Gaps = 10/453 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV-ALNY 63
G +V N L+ MY K + DA+ +F+ M R+++SW+ L++G Q+ E+ AL
Sbjct: 231 GCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL-QLNECELEALQL 289
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F + + TY + CA+ +++H + + G L +V L + Y K
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSK 349
Query: 124 CGLLSSAQFVFDASL-ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
CG L+ A +F + RN +SW +++S Q G+ + +F R+ V +EF+ ++
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSA 409
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L A + + QIH+ V K + V L+ Y+K + A +F I+ D
Sbjct: 410 MLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKD 465
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQLH 301
+ AWSA++ +AQ G A LF KM G+ P+E T S V+ A A + GRQ H
Sbjct: 466 VVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFH 525
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
++ IK + V++ ++ YS+ ++ + F+ + D+VSWN++I+G+ +
Sbjct: 526 AISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSM 585
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSAL 420
+AIE + M G + T+ ++ + + G+Q +V+ + + + +
Sbjct: 586 KAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACM 645
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
VD+Y++ G+L++ + + + W T+L
Sbjct: 646 VDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLL 678
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 160/316 (50%), Gaps = 2/316 (0%)
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
YA+ G E +D F G++ T S VL A V + + G QLH L +K G
Sbjct: 74 YARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRG 133
Query: 313 TFVANTVL-DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
A T L D Y KC + E ++ F+ M + +VV+W +L+ G + + E + L M
Sbjct: 134 EVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMR 193
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
EG PN +T++++L+ + A++ G++ H VK G S+V + ++L++MYAKCG +
Sbjct: 194 AEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVE 253
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
DA+ VF+ + ++++VSWNT++ G + EAL+++ + K +T+ V+ C
Sbjct: 254 DAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCA 313
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
++ + +S + HG + + ++ ++ G+ A + N V W
Sbjct: 314 NLKQLALA-RQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSW 372
Query: 552 RCLLSGCKTHKDLVLG 567
++SGC + D+ L
Sbjct: 373 TAIISGCIQNGDIPLA 388
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
+H + + L+ MY + I+ AQ +F+ +R+++SW+++ISG++Q G A+ FR
Sbjct: 533 YHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFR 592
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN--CLINMYGK 123
M ++ + T++ + C G G++ M R ++N + + C++++Y +
Sbjct: 593 QMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDH-KINPTMEHYACMVDLYSR 651
Query: 124 CGLLS-SAQFVFDASLERNSISWVSLLSS 151
G L + + D ++ W +LL +
Sbjct: 652 AGKLDETMSLIRDMPFPAGAMVWRTLLGA 680
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 224/693 (32%), Positives = 362/693 (52%), Gaps = 41/693 (5%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V ++N +L Y + +A+ LF+ MPERN +SW+ +ISG+ I A + FR M+
Sbjct: 156 DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTML 215
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK-CGLL 127
C + P V +SA G + IH ++++G E + V ++N Y K +L
Sbjct: 216 CEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNML 275
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
SA F+ RN +W +++++ Q G ++ V S S+L
Sbjct: 276 DSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVP----SRTSMLTGL 331
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A G + ++F E + +I Y + E +D A +F+ + + +W+
Sbjct: 332 ARYGRIDDA----KILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWA 387
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+I GYA+ G++ +A+ + G++PS + + A ++++ G+Q+HSL +K
Sbjct: 388 GMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKA 447
Query: 308 GFSSFTFVANTVLDFYSKCE-------------------------------LLEESLKTF 336
G ++V N ++ Y K L +E+ F
Sbjct: 448 GCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVF 507
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
+ M DVVSW +I+ + EA+E+ + ML E PN + +L +S ++ A +
Sbjct: 508 NNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQ 567
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G+Q H +K G DS +V+ +ALV MY KC D+ KVFD + +++ +WNT++ GYA
Sbjct: 568 LGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSA-DSLKVFDSMEERDIFTWNTIITGYA 626
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
QHGLGREA+ +Y +M + PN+ TF+G+L AC H GLV+EG +F SM D+G++P +
Sbjct: 627 QHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLL 686
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
+H A +V L G + A FI PIEP+ V+W LL CK HK++ +GR AAEK+ S
Sbjct: 687 EHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFS 746
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRF 636
+P + ++MLSN+Y+ MWDE AKVRK+MKE+ + KD GCSW +++NKMH F T
Sbjct: 747 IEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDE 806
Query: 637 AQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
Q +++ + +L L GYVPD + H
Sbjct: 807 EHEQIQNIYATLWELYTLLKATGYVPDTDFVLH 839
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 228/515 (44%), Gaps = 59/515 (11%)
Query: 4 SGFHPNVITYNHLLLMYVK-FSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
+GF +V+ +L Y K + ++ A K F+ M RN +WS +I+ SQ G + A
Sbjct: 252 TGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFA 311
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL------ELNSHVSNC 116
++ +P + + SR +G +GR+ + + E N N
Sbjct: 312 VYQR------DP--------LKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNA 357
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+I Y + ++ A+ +F+ RN+ISW +++ Y + G L + G+ S
Sbjct: 358 MITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPS 417
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL-------- 228
S S AC+ + L+ G Q+HSL K +F+ +V LI LY K +
Sbjct: 418 LSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFD 477
Query: 229 -----------------------DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
D A VF+N+ PD+ +W+ +I AQ + EA+++
Sbjct: 478 RMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEI 537
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F M +P+ + +LG ++ G+Q+H++ IK+G S VAN ++ Y K
Sbjct: 538 FRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFK 597
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C +SLK FD M+E D+ +WN +I G+ EAI + + M+ G PN T+ +
Sbjct: 598 CS-SADSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGL 656
Query: 386 LNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARK-VFDHLSSK 443
L+ S ++ G Q + G + + +VD+ + G + A ++D
Sbjct: 657 LHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEP 716
Query: 444 NLVSWNTMLVGYAQHG---LGREALE-IYSMMQEN 474
+ V W+ +L H +GR A E ++S+ N
Sbjct: 717 DSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSN 751
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 230/517 (44%), Gaps = 44/517 (8%)
Query: 22 KFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVG 81
+ R+++A+++FD MP R++I+W+++I + GMP+ R + + N T
Sbjct: 45 RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAG----RSLADAISGGNLRTGTI 100
Query: 82 AVSACASRGDARSGKEI-HGRMYRSGLELNSHVS-------------------------- 114
+S A G R + + G R+ + N+ V+
Sbjct: 101 LLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSW 160
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N ++ Y L+ A+ +F+ ERN +SW ++S Y +H +F G+
Sbjct: 161 NTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMT 220
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK-CEKLDLASR 233
+ + SVL A LG + IH LV K E D V ++N Y K LD A +
Sbjct: 221 PEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVK 280
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
F + + WS +I +Q G+ ID ++ + S + + +L A
Sbjct: 281 FFEGMAARNEYTWSTIIAALSQAGR----IDDAFAVYQRDPLKSVPSRTSMLTGLARYGR 336
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
+ L I + S+ N ++ Y + E+++E+ F+ M + +SW +IAG
Sbjct: 337 IDDAKILFDQIHEPNVVSW----NAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAG 392
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ + +A+ L+ + +G P+L + ++ S+I A+E GKQ H VK G N
Sbjct: 393 YARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFN 452
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ +AL+ +Y K + R++FD ++ K+ VS+N+ + Q+ L EA ++++
Sbjct: 453 SYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFN---- 508
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
N P+ ++ ++SAC E F SM+ +
Sbjct: 509 NMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHER 545
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 152/352 (43%), Gaps = 79/352 (22%)
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
I G+ G L A+ VFD+ R+ I+W S++ +YC G G R AIS
Sbjct: 40 IRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAG-------RSLADAISG 92
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
GNL+ G L++ YA+ ++ A RVF
Sbjct: 93 -------------GNLRTGTI-------------------LLSGYARAGRVRDARRVFDG 120
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ + + AW+A++ Y Q G I L K+F + MPS S+
Sbjct: 121 MGVRNTVAWNAMVTCYVQNGD----ITLARKLFDA--MPSRDVSSW-------------- 160
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
NT+L Y +L+EE+ F+ M E + VSW +I+G++
Sbjct: 161 -------------------NTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLI 201
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+G A ++ + ML EG P ++L+ + + H + K GF+ +VV+G
Sbjct: 202 EQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVG 261
Query: 418 SALVDMYAK-CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
+A+++ Y K L+ A K F+ ++++N +W+T++ +Q G +A +Y
Sbjct: 262 TAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVY 313
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 82/205 (40%), Gaps = 49/205 (23%)
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
SA + + GRL++AR+VFD + +++++WN+M+ Y +G+ + + ++
Sbjct: 37 SARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLR 96
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
T +LS G V + F+ M G+
Sbjct: 97 ----TGTILLSGYARAGRVRDARRVFDGM----GVR------------------------ 124
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
N V W +++ + D+ L R + + S D +S + ML+ Y + +
Sbjct: 125 ---------NTVAWNAMVTCYVQNGDITLARKLFDAMPSRDV--SSWNTMLTG-YCHSQL 172
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWT 622
+E + + M E++ G SWT
Sbjct: 173 MEEARNLFERMPERN-----GVSWT 192
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/673 (31%), Positives = 384/673 (57%), Gaps = 10/673 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S F ++ + L+ + ++ I+ A+ +F++M +RN ++ + L+ G ++ E A
Sbjct: 279 SSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKI 338
Query: 64 FRLMVCCVLEPNYYTYVGAVSACAS----RGDARSGKEIHGRMYRSGL-ELNSHVSNCLI 118
F+ M V E N +Y +SA + R G+E+H + R+ L ++ + N L+
Sbjct: 339 FKEMKDLV-EINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALV 397
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
N+Y KC + +A+ +F ++++SW S++S + F R++G+ S+F
Sbjct: 398 NLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKF 457
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S S L +CA LG + +G QIH KC L+ D V+ L+ LYA+ + ++ +VF +
Sbjct: 458 SVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLM 517
Query: 239 QLPDLTAWSALIGGYA-QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
D +W++ IG A +AI F++M +G P+ VTF +L A + + G
Sbjct: 518 PEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELG 577
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLA 356
RQ+H+LI+K + + NT+L FY KCE +E+ F M E D VSWNA+I+G++
Sbjct: 578 RQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIH 637
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ +A+ L+ M+ +G + +T + +L+ + + +E G + H C ++ ++ VV+
Sbjct: 638 NGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVV 697
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
GSALVDMYAKCG+++ A + F+ + +N+ SWN+M+ GYA+HG G +AL++++ M+++
Sbjct: 698 GSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQ 757
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P+ TF+GVLSAC H+GLV+EG+ +F SM + ++PR++H + +V L G ++
Sbjct: 758 LPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLE 817
Query: 537 EFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
EFIK+ P+ PN ++WR +L C ++ LGR AA+ ++ +P + +++LSN++A
Sbjct: 818 EFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAA 877
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
W++ + R M+ +KK+ GCSW +++ +H F + +++ + ++
Sbjct: 878 GGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNK 937
Query: 655 LFDGGYVPDPIYS 667
+ D GYVP+ Y+
Sbjct: 938 MRDLGYVPETKYA 950
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 156/570 (27%), Positives = 296/570 (51%), Gaps = 19/570 (3%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G +V N L+ ++V+ + AQKLFDEMP++N++SWS L+SG++Q GMP+ A
Sbjct: 68 TGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACML 127
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGD--ARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
FR ++ L PN+Y A+ AC G + G EIHG + +S + +SN L++MY
Sbjct: 128 FRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMY 187
Query: 122 GKCGL-LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI----S 176
C + A+ VF+ + S SW S++S YC+ G+ + K+F ++ + +
Sbjct: 188 SHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPN 247
Query: 177 EFS-CASVLGACAVLG-NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
E++ C+ V AC+++ L + Q+ + + K + D +V L++ +A+ +D A +
Sbjct: 248 EYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMI 307
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA---FADV 291
F + + + L+ G A+ + EA +F +M + + +++ +L A F+++
Sbjct: 308 FEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASSYAVLLSAFTEFSNL 366
Query: 292 KE-TIGGRQLHSLIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
KE G+++H+ +I+ + + N +++ Y+KC ++ + F M D VSWN+
Sbjct: 367 KEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNS 426
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I+G + + EA+ M G P+ ++ + L+ + + I G+Q H +K G
Sbjct: 427 IISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCG 486
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG-REALEIY 468
D +V + +AL+ +YA+ + + +KVF + + VSWN+ + A +A++ +
Sbjct: 487 LDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYF 546
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
M + KPN TFI +LSA + L+E G +++I H ++ + I + + F
Sbjct: 547 LEMMQAGWKPNRVTFINILSAVSSLSLLELG-RQIHALILKHSVADD-NAIENTLLAFYG 604
Query: 529 RGQTRRAYEFIKSSPIE-PNKVVWRCLLSG 557
+ + E I S E ++V W ++SG
Sbjct: 605 KCEQMEDCEIIFSRMSERRDEVSWNAMISG 634
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 249/491 (50%), Gaps = 31/491 (6%)
Query: 97 EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
++H ++Y++GL + N L+N++ + G L SAQ +FD ++N +SW L+S Y Q G
Sbjct: 60 QLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNG 119
Query: 157 EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN--LKVGMQIHSLVFKCALEFDKFV 214
+F +G+ + ++ S L AC LG LK+GM+IH L+ K D +
Sbjct: 120 MPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVL 179
Query: 215 AMGLINLYAKCE-KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
+ L+++Y+ C +D A RVF I++ +W+++I Y + G A A LF M
Sbjct: 180 SNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREA 239
Query: 274 L----MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT---FVANTVLDFYSKC 326
P+E TF ++ + + G L ++ ++ SSF +V + ++ +++
Sbjct: 240 TELNCRPNEYTFCSLVTVACSLVDC-GLTLLEQMLARIEKSSFVKDLYVGSALVSGFARY 298
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EAIELLKDM--LFEGHCPNLYTYS 383
L++ + F++MD+ + V+ N L+ G LA H G EA ++ K+M L E N +Y+
Sbjct: 299 GLIDSAKMIFEQMDDRNAVTMNGLMVG-LARQHQGEEAAKIFKEMKDLVE---INASSYA 354
Query: 384 NILNISSDIPAIEWGK----QTHCCIVKPGF-DSNVVIGSALVDMYAKCGRLNDARKVFD 438
+L+ ++ ++ GK + H +++ D ++IG+ALV++YAKC +++AR +F
Sbjct: 355 VLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQ 414
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+ SK+ VSWN+++ G + EA+ + M+ N + P+ + I LS+C +
Sbjct: 415 LMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASL----- 469
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVH-LFACRGQTRRAYEFIKSSPIEP--NKVVWRCLL 555
GW I GI +D SV + L +T E+ K + P ++V W +
Sbjct: 470 GWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFI 529
Query: 556 SGCKTHKDLVL 566
T + VL
Sbjct: 530 GALATSEASVL 540
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 157/292 (53%), Gaps = 2/292 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV-A 60
I G +V N LL +Y + + + QK+F MPE + +SW++ I + + A
Sbjct: 483 IKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQA 542
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ YF M+ +PN T++ +SA +S G++IH + + + ++ + N L+
Sbjct: 543 IKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAF 602
Query: 121 YGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
YGKC + + +F S R+ +SW +++S Y G + + L + G + +F+
Sbjct: 603 YGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFT 662
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
A+VL ACA + L+ GM++H+ + LE + V L+++YAKC K+D ASR F +
Sbjct: 663 LATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMP 722
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+ ++ +W+++I GYA+ G +A+ LF +M G +P VTF VL A + V
Sbjct: 723 VRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHV 774
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%)
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
N D +E Q H I K G S+V + LV+++ + G L A+K+FD + KNLV
Sbjct: 47 NRYRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLV 106
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
SW+ ++ GYAQ+G+ EA ++ + + PN L AC +G
Sbjct: 107 SWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELG 154
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/659 (32%), Positives = 348/659 (52%), Gaps = 70/659 (10%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
++ CA AR +H + +S + + N LI++YGKCG + A+ +FD LERN
Sbjct: 26 LNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNI 85
Query: 143 ISWVSLLSSYCQCG---EHVH----------------------------GLKIFLLSRKS 171
SW S++ ++ + G + VH L F
Sbjct: 86 FSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGH 145
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G ++E+S S L ACA L +LK+G QIHSLV++ D ++ L+++Y+KC +++ A
Sbjct: 146 GFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYA 205
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
VF + + +W++LI Y Q G EA+ +FV+M G+ P EVT + V+ A A +
Sbjct: 206 QSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATI 265
Query: 292 KETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMD---------- 340
G+Q+H+ ++K F + + N +LD Y+KC + E+ FD M
Sbjct: 266 SAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSM 325
Query: 341 ---------------------EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
DV++WNALIAG + EA+ L + + E P
Sbjct: 326 VSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTH 385
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGF------DSNVVIGSALVDMYAKCGRLNDA 433
YT+ N+LN +++ ++ G+Q H ++K GF DS+V +G++L+DMY KCG + +
Sbjct: 386 YTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENG 445
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+VF H+ K+ VSWN M+VGYAQ+G G +ALE++ M E+ P+ T IGVL AC H
Sbjct: 446 CRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHA 505
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GL++EG +YF SM HG+ P DH +V L G A I+ ++P+ +VW
Sbjct: 506 GLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGS 565
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL+ CK H+++ LG Y +K+L DPE++ +++LSN+YAE W +VRK+M+++ +
Sbjct: 566 LLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGV 625
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSHFEE 672
K GCSW E+Q +++ F + +++ V+ + + GYVP + S+ F+E
Sbjct: 626 VKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYVP-YVGSNEFDE 683
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 154/491 (31%), Positives = 250/491 (50%), Gaps = 42/491 (8%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N+ ++N ++ + K ++DA +F++MP+ + SW+++ISGF Q G + AL YF M
Sbjct: 84 NIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMH 143
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
N Y++ A+SACA D + G +IH +YRS + ++ + L++MY KCG +
Sbjct: 144 GHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVE 203
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
AQ VFD R+ +SW SL++ Y Q G LKIF+ K GV E + ASV+ ACA
Sbjct: 204 YAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACA 263
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLD----------------- 229
+ +K G QIH+ V KC EF + +G L+++YAKC +++
Sbjct: 264 TISAIKEGQQIHARVVKCD-EFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSE 322
Query: 230 --------------LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
+A +FSN+ + D+ W+ALI G Q G+ EA+ LF + +
Sbjct: 323 TSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVW 382
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF------SSFTFVANTVLDFYSKCELL 329
P+ TF +L A A++ + GRQ HS ++K GF S FV N+++D Y KC +
Sbjct: 383 PTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSV 442
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
E + F M E D VSWNA+I G+ + +A+E+ ML G P+ T +L
Sbjct: 443 ENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCAC 502
Query: 390 SDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVS 447
S ++ G+ + G + +VD+ + G L +A+ + + +S + + +
Sbjct: 503 SHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIV 562
Query: 448 WNTMLVGYAQH 458
W ++L H
Sbjct: 563 WGSLLAACKVH 573
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 194/403 (48%), Gaps = 44/403 (10%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S + +V + L+ MY K R+ AQ +FDEM R+ +SW++LI+ + Q G + AL
Sbjct: 180 SNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKI 239
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV-SNCLINMYG 122
F M+ C +EP+ T VSACA+ + G++IH R+ + N + N L++MY
Sbjct: 240 FVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYA 299
Query: 123 KCGLLSSAQFVFDA-------------------------------SLERNSISWVSLLSS 151
KC ++ A+ +FD + ++ I+W +L++
Sbjct: 300 KCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAG 359
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF- 210
Q GE+ L +F L ++ V + ++ ++L ACA L +L++G Q HS V K F
Sbjct: 360 CTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQ 419
Query: 211 -----DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
D FV LI++Y KC ++ RVF ++ D +W+A+I GYAQ G +A+++
Sbjct: 420 YGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEV 479
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR-QLHSLIIKMGFSSFTFVANTVLDFYS 324
F KM SG P VT VL A + GR S+ + G ++D
Sbjct: 480 FCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLG 539
Query: 325 KCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIEL 366
+ LEE+ +EM + D + W +L LA+C I+L
Sbjct: 540 RAGYLEEAKNLIEEMSMQPDAIVWGSL----LAACKVHRNIQL 578
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 208/418 (49%), Gaps = 73/418 (17%)
Query: 157 EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
+H+ G +FL S S FS +L CA + + ++H+ + K + F+
Sbjct: 8 KHLKGDLLFLDS-------SPFS--KLLNQCARSRSARDTSRVHACIIKSPFASETFIQN 58
Query: 217 GLINLYAKCEKLDLASRVFSNI-----------------------------QLP--DLTA 245
LI++Y KC +D+A ++F + ++P D +
Sbjct: 59 RLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCS 118
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+++I G+ Q G+ EA+ F +M G + +E +F L A A +++ G Q+HSL+
Sbjct: 119 WNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVY 178
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
+ + S ++ + ++D YSKC +E + FDEM VSWN+LI + + EA++
Sbjct: 179 RSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALK 238
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-PGFDSNVVIGSALVDMY 424
+ +M+ G P+ T +++++ + I AI+ G+Q H +VK F +++++G+AL+DMY
Sbjct: 239 IFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMY 298
Query: 425 AKCGRLNDARKVFD-------------------------------HLSSKNLVSWNTMLV 453
AKC R+N+AR +FD ++ K++++WN ++
Sbjct: 299 AKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIA 358
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
G Q+G EAL ++ +++ + P TF +L+AC ++ ++ G + +++ HG
Sbjct: 359 GCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLK-HG 415
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 127/318 (39%), Gaps = 70/318 (22%)
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L D+LF P +S +LN + + + H CI+K F S I + L+D+Y
Sbjct: 10 LKGDLLFLDSSP----FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYG 65
Query: 426 KCGRLNDARKVFDHLSSKNLV-------------------------------SWNTMLVG 454
KCG ++ ARK+FD + +N+ SWN+M+ G
Sbjct: 66 KCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISG 125
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
+ QHG EAL ++ M + N+ +F LSAC + ++ G + + R + +S
Sbjct: 126 FEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSD 185
Query: 515 ---------------RMDHIASVVH------------LFACRGQTRRAYEFIK------S 541
R+++ SV L C Q E +K
Sbjct: 186 VYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIK 245
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP--EDTSAHIMLSNVYAEANMWD 599
+EP++V ++S C T + G+ +++ D D L ++YA+ N +
Sbjct: 246 CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRIN 305
Query: 600 ETAKVRKIMKEKSLKKDT 617
E + +M +S+ +T
Sbjct: 306 EARIIFDMMPIRSVVSET 323
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V N L+ MY+K + + ++F M E++ +SW+A+I G++Q G AL F
Sbjct: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY-RSGL-ELNSHVSNCLINMYG 122
M+ P++ T +G + AC+ G G+ M + GL L H + C++++ G
Sbjct: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYT-CMVDLLG 539
Query: 123 KCGLLSSAQ-FVFDASLERNSISWVSLLSS-----YCQCGEHV 159
+ G L A+ + + S++ ++I W SLL++ Q GE+V
Sbjct: 540 RAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYV 582
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/646 (32%), Positives = 363/646 (56%), Gaps = 1/646 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L +Y+ +++ A++LFDE+P +VI W+ +I ++ G + A++ + M+ + PN
Sbjct: 49 LTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPN 108
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
YTY + AC+ G EIH GLE + V L++ Y KCG+L AQ +F
Sbjct: 109 KYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFS 168
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+ R+ ++W ++++ G +++ + ++ G+ + + VL L
Sbjct: 169 SMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGH 228
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +H + + + V GL+++YAKC+ L A ++F + + + +WSA+IGGY
Sbjct: 229 GKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVA 288
Query: 256 LGKACEAIDLFVKMFSSGLM-PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
EA++LF +M M P+ VT VL A A + + GR+LH IIK+G
Sbjct: 289 SDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDIL 348
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
+ NT+L Y+KC +++++++ FDEM+ D VS++A+++G + + + A+ + + M G
Sbjct: 349 LGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSG 408
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P+L T +L S + A++ G +H ++ GF ++ +I +AL+DMY+KCG+++ AR
Sbjct: 409 IDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAR 468
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+VF+ + ++VSWN M++GY HGLG EAL ++ + +KP+D TFI +LS+C H G
Sbjct: 469 EVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSG 528
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
LV EG +F++M RD I PRM+H +V + G A+ FI++ P EP+ +W L
Sbjct: 529 LVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSAL 588
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
LS C+ HK++ LG ++KI S PE T ++LSN+Y+ A WD+ A +R K+ LK
Sbjct: 589 LSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLK 648
Query: 615 KDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
K GCSW E+ +H F + Q ++ + +L V + GY
Sbjct: 649 KIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGY 694
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 223/424 (52%), Gaps = 1/424 (0%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
Y+ + AC K+IH ++ +S V + L +Y C + A+ +FD
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+ I W ++ +Y G + ++ GV ++++ VL AC+ L ++ G+
Sbjct: 70 PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
+IHS LE D FV L++ YAKC L A R+FS++ D+ AW+A+I G + G
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+A+ L ++M G+ P+ T VL + K G+ LH ++ F + V
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF-EGHC 376
+LD Y+KC+ L + K FD M + VSW+A+I G++AS EA+EL M+ +
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMD 309
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P T ++L + + + G++ HC I+K G ++++G+ L+ MYAKCG ++DA +
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRF 369
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
FD ++ K+ VS++ ++ G Q+G AL I+ MMQ + I P+ T +GVL AC H+ +
Sbjct: 370 FDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429
Query: 497 EEGW 500
+ G+
Sbjct: 430 QHGF 433
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 189/384 (49%), Gaps = 1/384 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V L+ Y K + +AQ+LF M R+V++W+A+I+G S G+ + A+
Sbjct: 139 GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLI 198
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M + PN T VG + GK +HG R + V L++MY KC
Sbjct: 199 MQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKC 258
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASV 183
L A+ +FD RN +SW +++ Y L++F + K + + + SV
Sbjct: 259 QCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSV 318
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L ACA L +L G ++H + K D + L+++YAKC +D A R F + D
Sbjct: 319 LRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDS 378
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
++SA++ G Q G A A+ +F M SG+ P T VL A + + G H
Sbjct: 379 VSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGY 438
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+I GF++ T + N ++D YSKC + + + F+ MD HD+VSWNA+I G+ EA
Sbjct: 439 LIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEA 498
Query: 364 IELLKDMLFEGHCPNLYTYSNILN 387
+ L D+L G P+ T+ +L+
Sbjct: 499 LGLFHDLLALGLKPDDITFICLLS 522
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 179/372 (48%), Gaps = 15/372 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ F V+ LL MY K + A+K+FD M RN +SWSA+I G+ + AL
Sbjct: 237 VRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEAL 296
Query: 62 NYFRLMVCC-VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M+ ++P T + ACA D G+++H + + G L+ + N L++M
Sbjct: 297 ELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSM 356
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG++ A FD ++S+S+ +++S Q G L IF + + SG+ +
Sbjct: 357 YAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTM 416
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
VL AC+ L L+ G H + D + LI++Y+KC K+ A VF+ +
Sbjct: 417 LGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDR 476
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+A+I GY G EA+ LF + + GL P ++TF +L + + + GR
Sbjct: 477 HDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLW 536
Query: 301 HSLIIKMGFSSFTFVANT-----VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGH 354
+ + F+ V ++D + L++E+ M E DV W+AL
Sbjct: 537 FDAMSR----DFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSAL---- 588
Query: 355 LASCHYGEAIEL 366
L++C + IEL
Sbjct: 589 LSACRIHKNIEL 600
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 84/158 (53%), Gaps = 12/158 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF + + N L+ MY K +I+ A+++F+ M +++SW+A+I G+ G+ A
Sbjct: 439 LIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEA 498
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN----- 115
L F ++ L+P+ T++ +S+C + SG + GR++ + + +
Sbjct: 499 LGLFHDLLALGLKPDDITFICLLSSC-----SHSGLVMEGRLWFDAMSRDFSIVPRMEHC 553
Query: 116 -CLINMYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
C++++ G+ GL+ A F+ + E + W +LLS+
Sbjct: 554 ICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/625 (32%), Positives = 348/625 (55%), Gaps = 15/625 (2%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
PN + L +V+ + +A +F++M + W+ +I G++ G+ + A++++
Sbjct: 55 RPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYR 114
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M C + + +T+ + AC G+++HG++ + G +L+ +V N LI+MY K G
Sbjct: 115 MECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGF 174
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ A+ VFD R+ +SW S++S Y G+ + L F + G F S LGA
Sbjct: 175 IELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGA 234
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
C++ L+ GM+IH V + LE D V LI++Y KC K+D A RVF+ I ++ AW
Sbjct: 235 CSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAW 294
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+A+IGG + K ++P +T +L + + + G+ +H I+
Sbjct: 295 NAMIGGMQEDDK---------------VIPDVITMINLLPSCSQSGALLEGKSIHGFAIR 339
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
F + + ++D Y KC L+ + F++M+E ++VSWN ++A ++ + Y EA+++
Sbjct: 340 KMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKM 399
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+ +L E P+ T +++L +++ + GKQ H I+K G SN I +A+V MYAK
Sbjct: 400 FQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAK 459
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG L AR+ FD + K++VSWNTM++ YA HG GR +++ +S M+ KPN +TF+ +
Sbjct: 460 CGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSL 519
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L+AC GL++EGW +FNSM ++GI P ++H ++ L G A FI+ P+ P
Sbjct: 520 LTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVP 579
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+W LL+ + H D+VL AA ILS ++T +++LSN+YAEA W++ +++
Sbjct: 580 TARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKY 639
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYF 631
+MKE+ L K GCS ++ + F
Sbjct: 640 LMKEQGLVKTVGCSMVDINGRSESF 664
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 231/461 (50%), Gaps = 19/461 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +V N L+ MY+K I A+K+FDEMP R+++SW++++SG+ G +
Sbjct: 150 LIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSS 209
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ M+ + + + + A+ AC+ RSG EIH ++ RS LEL+ V LI+M
Sbjct: 210 LMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDM 269
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG + A+ VF+ +N ++W +++ + V +
Sbjct: 270 YGKCGKVDYAERVFNRIYSKNIVAWNAMIGG---------------MQEDDKVIPDVITM 314
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++L +C+ G L G IH + + L+++Y KC +L LA VF+ +
Sbjct: 315 INLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNE 374
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+ ++ Y Q + EA+ +F + + L P +T + VL A A++ G+Q+
Sbjct: 375 KNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQI 434
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS I+K+G S TF++N ++ Y+KC L+ + + FD M DVVSWN +I +
Sbjct: 435 HSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFG 494
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE--WGKQTHCCIVKPGFDSNVVIGS 418
+I+ +M +G PN T+ ++L S I+ WG + V+ G D +
Sbjct: 495 RTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWG-FFNSMKVEYGIDPGIEHYG 553
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQH 458
++D+ + G L++A+ + + W ++L H
Sbjct: 554 CMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNH 594
>gi|242081959|ref|XP_002445748.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
gi|241942098|gb|EES15243.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
Length = 760
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/639 (32%), Positives = 349/639 (54%), Gaps = 8/639 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI +G+ P + N+LL YV+ + A+ LFD MP R+V++W+ LI+G++ G A
Sbjct: 1 MIRAGYRPGLFLSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSA 60
Query: 61 LNYFR-LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L FR + + +TY ++AC GD RSG+ HG SGL + VSN +I+
Sbjct: 61 LGAFRDARRDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVID 120
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KC ++ + FD + ER+ +SW LLS+Y + G + + +SGV + F+
Sbjct: 121 MYAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAFA 180
Query: 180 CASVLGACAVLGNLK-VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+L AC+ L + + V +H V K L+ D FV ++++YAK L+ A +VF +I
Sbjct: 181 LGGILKACSELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGSI 240
Query: 239 QLPDLTAWSALIGGYAQLGK------ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
++ ++ +I G+A+LG EA+ ++ MF + PS+ TF VL
Sbjct: 241 PSQNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEVCNLTN 300
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
RQ+H+ +I GF F+ N +++ YSK L+++SL+ F + ++ +W ++I
Sbjct: 301 AVRCWRQIHAHVILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRTPKQEIFTWTSMIT 360
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
+ + H +A+ L K + + G P+ +T S+++N +D+ +Q HC VK GFD
Sbjct: 361 AFVRNEHSDKALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACEQIHCYAVKSGFDR 420
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+ G++ ++MY G L A+K F+ + S + SW+ M++ YA HG REAL ++ M+
Sbjct: 421 FTLCGNSQIEMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREALLLFKKMR 480
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+ + N+ F+ VL AC H GL++EG+ ++ SM+ D+ P + HIA +V L G+
Sbjct: 481 DCSVIINEFAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVPDVKHIACMVDLLGHVGKV 540
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
A +FI SS +E + V+W LL C+ H D G EK+++ +P S+++ML N+Y
Sbjct: 541 ADAEDFINSSGLENDSVLWHTLLRACRIHGDKDRGIKTGEKLMTLEPFAASSYVMLYNLY 600
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+A + R M+E+ + K++G SW E +F
Sbjct: 601 MDAGKISLAMRTRGQMRERGMTKESGVSWAEFGGSCQHF 639
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/659 (32%), Positives = 346/659 (52%), Gaps = 69/659 (10%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
+ C + +H R+ ++ + N L+++YGKCG L A+ VFD +RN+
Sbjct: 26 LDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNT 85
Query: 143 ISWVSLLSSYCQCGEHVHGLKIF--LLSRK--------SGVA------------------ 174
SW ++L + + G L +F + R SG A
Sbjct: 86 FSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSE 145
Query: 175 ---ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
++E+S S L ACA L +L +G+QIH L+ K D ++ L+++Y+KC + A
Sbjct: 146 DFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASA 205
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
R F ++ + ++ +W++LI Y Q G A +A+++FV+M + G+ P E+T + V A A +
Sbjct: 206 QRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASL 265
Query: 292 KETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMD---------- 340
G Q+H+ ++K + + + N ++D Y+KC + E+ FD M
Sbjct: 266 SAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSM 325
Query: 341 ---------------------EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
E +VVSWNALIAG+ + EA+ L + E P
Sbjct: 326 VSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTH 385
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGF------DSNVVIGSALVDMYAKCGRLNDA 433
YT+ N+LN +++ ++ G+Q H I+K GF DS++ +G++L+DMY KCG + D
Sbjct: 386 YTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDG 445
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
R VF+ + ++ VSWN M+VGYAQ+G G EALEI+ M + +P+ T IGVLSAC H
Sbjct: 446 RLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHA 505
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLVEEG YF SM +HG+ P DH +V L G A I++ P+EP+ VVW
Sbjct: 506 GLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGS 565
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL+ CK H ++ LG+Y AE++L DP ++ +++LSN+YAE W + +VRK M++ +
Sbjct: 566 LLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGV 625
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSHFEE 672
K GCSW +Q+ +H F D++ ++ L+ + GYVP+ +EE
Sbjct: 626 IKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEADDDEPYEE 684
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 154/491 (31%), Positives = 248/491 (50%), Gaps = 40/491 (8%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N ++N +L KF +++A LF MPER+ SW+A++SGF+Q E AL + M
Sbjct: 84 NTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMH 143
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
N Y++ A+SACA D G +IHG + +S L+ ++ + L++MY KC +++
Sbjct: 144 SEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVA 203
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
SAQ FD RN +SW SL++ Y Q G L++F+ G+ E + ASV ACA
Sbjct: 204 SAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACA 263
Query: 189 VLGNLKVGMQIHSLVFK-CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA-- 245
L ++ G+QIH+ V K D + L+++YAKC +++ A VF + L D+ +
Sbjct: 264 SLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSET 323
Query: 246 -----------------------------WSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
W+ALI GY Q G+ EA+ LF+ + + P
Sbjct: 324 SMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWP 383
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF------SSFTFVANTVLDFYSKCELLE 330
+ TF +L A A++ + GRQ H+ I+K GF S FV N+++D Y KC L+E
Sbjct: 384 THYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVE 443
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
+ F+ M E D VSWNA+I G+ + + EA+E+ ++ML G P+ T +L+ S
Sbjct: 444 DGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACS 503
Query: 391 DIPAIEWGK-QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSW 448
+E G+ ++ G + +VD+ + G L++A + + + V W
Sbjct: 504 HAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVW 563
Query: 449 NTMLVGYAQHG 459
++L HG
Sbjct: 564 GSLLAACKVHG 574
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 122/250 (48%), Gaps = 31/250 (12%)
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
F+ +L K R +H+ IIK FSS F+ N ++D Y KC LE++ K FD M
Sbjct: 22 FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ 81
Query: 341 -------------------------------EHDVVSWNALIAGHLASCHYGEAIELLKD 369
E D SWNA+++G + EA+ + D
Sbjct: 82 QRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVD 141
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M E N Y++ + L+ + + + G Q H I K + +V +GSALVDMY+KC
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRV 201
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ A++ FD + +N+VSWN+++ Y Q+G +ALE++ M I+P++ T V SA
Sbjct: 202 VASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASA 261
Query: 490 CVHIGLVEEG 499
C + + EG
Sbjct: 262 CASLSAIREG 271
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 146/312 (46%), Gaps = 44/312 (14%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE--------------------------- 38
+ +++ N L+ MY K R+N+A+ +FD MP
Sbjct: 284 YRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFS 343
Query: 39 ----RNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARS 94
RNV+SW+ALI+G++Q G E A+ F L+ + P +YT+ ++ACA+ D +
Sbjct: 344 NMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKL 403
Query: 95 GKEI------HGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
G++ HG ++SG + + V N LI+MY KCGL+ + VF+ LER+++SW ++
Sbjct: 404 GRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAM 463
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM-QIHSLVFKCA 207
+ Y Q G L+IF SG + VL AC+ G ++ G S+ +
Sbjct: 464 IVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHG 523
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALIG-----GYAQLGKACE 261
L K +++L + LD A+ + + + PD W +L+ G LGK
Sbjct: 524 LVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVA 583
Query: 262 AIDLFVKMFSSG 273
L + +SG
Sbjct: 584 ERLLEIDPLNSG 595
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG ++ N L+ MY+K + D + +F+ M ER+ +SW+A+I G++Q G AL
Sbjct: 420 SGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEI 479
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM-YRSGLELNSHVSNCLINMYG 122
FR M+ P++ T +G +SAC+ G G+ M GL C++++ G
Sbjct: 480 FREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLG 539
Query: 123 KCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHG 161
+ G L A + +E +++ W SLL++ C+ VHG
Sbjct: 540 RAGCLDEANNLIQTMPMEPDAVVWGSLLAA-CK----VHG 574
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+G +++ D+ F P ++ +L+ ++ + H I+K F S + I +
Sbjct: 4 HGLVRKVVGDLSFLDSSP----FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNR 59
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
LVD+Y KCG L DARKVFDH+ +N SWN +L + G EAL ++ M E
Sbjct: 60 LVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPE 113
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/633 (31%), Positives = 354/633 (55%), Gaps = 11/633 (1%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF-RL 66
P++ N LL Y + A++L DEMP N +S++ LI +S+ G PE +L F R
Sbjct: 47 PSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARA 104
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
+ + +TY A++AC+ G R GK +H G+ VSN L++MY +CG
Sbjct: 105 RRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGD 164
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ A+ VFDA+ ER+ +SW +L+S Y + G L++F + R+SG+ ++ F+ SV+
Sbjct: 165 MGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKC 224
Query: 187 CAVLGN--LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
CA + + + +H V K + D F+A ++ +YAK L A +F ++ P++
Sbjct: 225 CAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVV 284
Query: 245 AWSALIGGYAQLGKAC------EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
++A+I G + A EA+ L+ ++ S G+ P+E TFS V+ A + G+
Sbjct: 285 VFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGK 344
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H ++K F F+ + ++D Y +E+ + F + + DVV+W A+I+G + +
Sbjct: 345 QIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNE 404
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ A+ L ++L G P+ +T S+++N + + G+Q C K GF +G+
Sbjct: 405 LFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGN 464
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+ + MYA+ G ++ A + F + S ++VSW+ ++ +AQHG R+AL ++ M + K+ P
Sbjct: 465 SCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVP 524
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N+ TF+GVL+AC H GLV+EG Y+ +M ++ +SP + H VV L G+ A F
Sbjct: 525 NEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAF 584
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I+ S V+WR LL+ C+ H+D+ G+ A++I+ P +++++ L N+Y +A
Sbjct: 585 IRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGEL 644
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+K+R +MKE+ +KK+ G SW EL++ +H F
Sbjct: 645 SLASKIRDVMKERGVKKEPGLSWIELRSGVHSF 677
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 225/467 (48%), Gaps = 10/467 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G V N L+ MY + + A+++FD ER+ +SW+AL+SG+ + G + L
Sbjct: 141 VLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDML 200
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDA--RSGKEIHGRMYRSGLELNSHVSNCLIN 119
F +M + N + + CA D +HG + ++G + + +++ ++
Sbjct: 201 RVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVG 260
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ----CGEHV--HGLKIFLLSRKSGV 173
MY K G LS A +F + L+ N + + ++++ C+ G V L ++ + G+
Sbjct: 261 MYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGM 320
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+EF+ +SV+ AC + G+++ G QIH V K + D F+ LI+LY ++ R
Sbjct: 321 EPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFR 380
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
F+++ D+ W+A+I G Q A+ LF ++ +GL P T S V+ A A +
Sbjct: 381 CFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAV 440
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G Q+ K GF FT + N+ + Y++ + +++ F EM+ HD+VSW+A+I+
Sbjct: 441 ARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISS 500
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDS 412
H +A+ +M+ PN T+ +L S ++ G + + + +
Sbjct: 501 HAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSP 560
Query: 413 NVVIGSALVDMYAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQH 458
+ + +VD+ + GRL DA + D + V W ++L H
Sbjct: 561 TIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIH 607
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 196/406 (48%), Gaps = 23/406 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGF----SQIGM 56
++ +GF +V + ++ MY K +++A LF + + NV+ ++A+I+G + +G
Sbjct: 243 VVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGT 302
Query: 57 PEV--ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
+ AL+ + + +EP +T+ + AC GD GK+IHG++ + + + +
Sbjct: 303 DVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIG 362
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
+ LI++Y G + F + +++ ++W +++S Q L +F +G+
Sbjct: 363 SALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLK 422
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLAS 232
F+ +SV+ ACA L + G QI K F +F AMG I++YA+ + A
Sbjct: 423 PDPFTISSVMNACASLAVARTGEQIQCFATKSG--FGRFTAMGNSCIHMYARSGDVHAAV 480
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD-- 290
R F ++ D+ +WSA+I +AQ G A +A+ F +M + ++P+E+TF VL A +
Sbjct: 481 RRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGG 540
Query: 291 -VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHD-VVSWN 348
V E G + ++ + S V+D + L ++ + HD V W
Sbjct: 541 LVDE--GLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWR 598
Query: 349 ALIAGHLASCHYGEAIE---LLKDMLFEGHCPNLYTYSNILNISSD 391
+L LASC +E L+ D + E + +Y N+ NI D
Sbjct: 599 SL----LASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLD 640
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/660 (32%), Positives = 365/660 (55%), Gaps = 3/660 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVIS-WSALISGFSQIGMPEV 59
++T G ++ +L+ +Y+ + A+ +FD M IS W+ L++G+++ M
Sbjct: 29 VVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVE 88
Query: 60 ALNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
AL F +L+ L+P+ YTY + AC GK IH + ++GL ++ V + L+
Sbjct: 89 ALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLV 148
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY KC A ++F+ E++ W +++S Y Q G L+ F L R+ G +
Sbjct: 149 GMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSV 208
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ + + +CA L +L GM+IH + D F++ L+++Y KC L++A VF +
Sbjct: 209 TITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQM 268
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ AW+++I GY G + I LF +M++ G+ P+ T S ++ + + G+
Sbjct: 269 PKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGK 328
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H I+ S F+ ++++D Y KC +E + F + + VVSWN +I+G++A
Sbjct: 329 FVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEG 388
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA+ L +M P+ T++++L S + A+E G++ H I++ D+N V+
Sbjct: 389 KLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMG 448
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAKCG +++A VF L ++LVSW +M+ Y HG ALE+++ M ++ +KP
Sbjct: 449 ALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKP 508
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ +LSAC H GLV+EG +YFN M+ +GI PR++H + ++ L G+ AYE
Sbjct: 509 DRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEI 568
Query: 539 IKSSP-IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
++ +P I + + L S C+ H+++ LG A ++ DP+D+S +I+LSN+YA A+
Sbjct: 569 LQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHK 628
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
WDE VR MKE LKK+ GCSW E+ K+ F + + + ++ LS H+ D
Sbjct: 629 WDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMED 688
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 189/378 (50%), Gaps = 6/378 (1%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP- 241
+L AC +LK G IH V L+ D F+ LINLY C D A VF N++ P
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+++ W+ L+ GY + EA++LF K+ L P T+ VL A + + + G+ +
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++K G V ++++ Y+KC E+++ F+EM E DV WN +I+ + S ++
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+E M G PN T + ++ + + + G + H ++ GF + I SAL
Sbjct: 189 KEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMY KCG L A +VF+ + K +V+WN+M+ GY G ++++ M +KP
Sbjct: 249 VDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTL 308
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
T ++ C + EG IR+ I + +S++ L+ G+ A K
Sbjct: 309 TTLSSLIMVCSRSARLLEGKFVHGYTIRNR-IQSDVFINSSLMDLYFKCGKVELAENIFK 367
Query: 541 SSPIEPNKVV-WRCLLSG 557
P +KVV W ++SG
Sbjct: 368 LIP--KSKVVSWNVMISG 383
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/645 (32%), Positives = 356/645 (55%), Gaps = 1/645 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MYV + +++FD + + W+ L+S +++IG ++ F M + +
Sbjct: 98 LVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGD 157
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
YT+ + A+ R K +HG + + G + V N LI Y KCG + SA+ +FD
Sbjct: 158 SYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFD 217
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+R+ +SW S++S G +GL+ F+ GV + + +VL ACA +GNL +
Sbjct: 218 ELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTL 277
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +H+ K L+++Y+KC L+ A+ VF + + +W+++I + +
Sbjct: 278 GRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVR 337
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G EAI LF +M S GL P + V+ A A GR++H+ I K S V
Sbjct: 338 EGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPV 397
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
+N +++ Y+KC +EE+ F ++ ++VSWN +I G+ + EA++L DM +
Sbjct: 398 SNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQLK 457
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+ T + +L + + A+E G++ H I++ G+ S++ + ALVDMY KCG L A++
Sbjct: 458 -PDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQ 516
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+FD + K+++ W M+ GY HG G+EA+ + M+ I+P +++F +L AC H GL
Sbjct: 517 LFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGL 576
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
++EGW F+SM + I P+++H A +V L G RAY+FI++ PI+P+ +W LL
Sbjct: 577 LKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALL 636
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
SGC+ H D+ L AE I +PE+T +++L+NVYAEA W+E K+++ + + LK
Sbjct: 637 SGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKN 696
Query: 616 DTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
D GCSW E+Q K + F + Q + ++ +L++ + GGY
Sbjct: 697 DQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLTMKMNRGGY 741
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 155/555 (27%), Positives = 273/555 (49%), Gaps = 10/555 (1%)
Query: 33 FDEMPERNV-ISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGD 91
E NV + +A I F ++G A+ LE N TY + CA
Sbjct: 15 LSETTHNNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKS 72
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
GK +H + +G+ ++ + L+ MY CG L + +FD L W L+S
Sbjct: 73 LEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSE 132
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
Y + G + + +F ++ G+ ++ VL A ++ ++H V K
Sbjct: 133 YAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSY 192
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
V LI Y KC +++ A +F + D+ +W+++I G G + ++ F++M +
Sbjct: 193 NAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLN 252
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
G+ T VL A A+V GR LH+ +K GFS NT+LD YSKC L
Sbjct: 253 LGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNG 312
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+ + F +M E +VSW ++IA H+ + EAI L +M +G P++Y +++++ +
Sbjct: 313 ANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACAC 372
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+++ G++ H I K SN+ + +AL++MYAKCG + +A +F L KN+VSWNTM
Sbjct: 373 SNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTM 432
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
+ GY+Q+ L EAL+++ MQ+ ++KP+D T VL AC + +E+G ++R
Sbjct: 433 IGGYSQNSLPNEALQLFLDMQK-QLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGY 491
Query: 512 ISPRMDHIA-SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH--KDLVLGR 568
S H+A ++V ++ G A + P + + ++W +++G H +
Sbjct: 492 FSDL--HVACALVDMYVKCGLLVLAQQLFDMIP-KKDMILWTVMIAGYGMHGFGKEAIST 548
Query: 569 YAAEKILSTDPEDTS 583
+ ++ +PE++S
Sbjct: 549 FEKMRVAGIEPEESS 563
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 234/460 (50%), Gaps = 11/460 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N L+ Y K + A+ LFDE+ +R+V+SW+++ISG + G L +F
Sbjct: 188 GFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFF 247
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ ++ + T V + ACA+ G+ G+ +H ++G +N L++MY KC
Sbjct: 248 IQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKC 307
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L+ A VF E +SW S+++++ + G H + +F + G+ ++ SV+
Sbjct: 308 GNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVV 367
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA +L G ++H+ + K + + V+ L+N+YAKC ++ A+ +FS + + ++
Sbjct: 368 HACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIV 427
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ +IGGY+Q EA+ LF+ M L P +VT + VL A A + GR++H I
Sbjct: 428 SWNTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPACAGLAALEKGREIHGHI 486
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
++ G+ S VA ++D Y KC LL + + FD + + D++ W +IAG+ EAI
Sbjct: 487 LRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAI 546
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVVIGSA 419
+ M G P ++++IL + ++ G C ++P + +
Sbjct: 547 STFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHY----AC 602
Query: 420 LVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH 458
+VD+ + G L+ A K + + K + W +L G H
Sbjct: 603 MVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIH 642
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 198/425 (46%), Gaps = 26/425 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF V+ N LL MY K +N A ++F +M E ++SW+++I+ + G+ A+
Sbjct: 286 VKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAI 345
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M L P+ Y V ACA G+E+H + ++ + N VSN L+NMY
Sbjct: 346 GLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMY 405
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A +F +N +SW +++ Y Q L++FL +K + + + A
Sbjct: 406 AKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQ-LKPDDVTMA 464
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
VL ACA L L+ G +IH + + D VA L+++Y KC L LA ++F I
Sbjct: 465 CVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKK 524
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ W+ +I GY G EAI F KM +G+ P E +F+ +L A H
Sbjct: 525 DMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACT-----------H 573
Query: 302 SLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSWN 348
S ++K G+ F + + ++D + L + K + M + D W
Sbjct: 574 SGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWG 633
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
AL++G H E E + + +FE N Y + N+ ++ E K+ I K
Sbjct: 634 ALLSGCRIH-HDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKG 692
Query: 409 GFDSN 413
G ++
Sbjct: 693 GLKND 697
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ ++ L+ MYVK + AQ+LFD +P++++I W+ +I+G+ G + A
Sbjct: 486 ILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEA 545
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
++ F M +EP ++ + AC G + G ++ M +E C+++
Sbjct: 546 ISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVD 605
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLS 150
+ + G LS A +F+ ++ ++ W +LLS
Sbjct: 606 LLIRSGNLSRAYKFIETMPIKPDAAIWGALLS 637
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/693 (30%), Positives = 370/693 (53%), Gaps = 41/693 (5%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V ++N +L Y ++ DA+ LF++MPERN++SW+ +ISG+ +I A + F M
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMH 216
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK-CGLL 127
L P+ + A+SA G+ + + ++G E + + ++N+Y + +L
Sbjct: 217 REGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVL 276
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+A F++ +ERN +W +++++ G + ++ +A + + L C
Sbjct: 277 DTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRT-ALITGLAQC 335
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ + ++ +F+ E LI Y + ++ A +F + + +W+
Sbjct: 336 GRIDDARI-------LFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWA 388
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+I GYAQ G++ EA+ L ++ SG++PS + + + A +++ G Q+HSL +K+
Sbjct: 389 GMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKV 448
Query: 308 GFSSFTFVANTVLDFYSKC-------------------------------ELLEESLKTF 336
G +F N ++ Y KC +LL+E+ TF
Sbjct: 449 GCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTF 508
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
D M D VSW +I+ + + EA+ K M E PN + +L + + A +
Sbjct: 509 DNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASK 568
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G+Q H +K G DS +++ +AL+ MY KCG D+R++FD + +++ +WNT++ GYA
Sbjct: 569 IGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYA 627
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
QHGLGREA+++Y M+ + PN+ TF+G+L+AC H GLV+EGW +F SM +D+G++P
Sbjct: 628 QHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLP 687
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
+H A +V L G + A +FI PIEP+ V+W LL CK HK+ +G+ AAEK+
Sbjct: 688 EHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFR 747
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRF 636
+P + ++MLSN+Y+ MW E A+VRKIMK++ + K+ GCSWT++++KMH F T
Sbjct: 748 IEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDK 807
Query: 637 AQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
Q ++ + +L L GYVPD + H
Sbjct: 808 QHEQIEEIVATLEELYTLLKATGYVPDTEFVLH 840
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 230/521 (44%), Gaps = 52/521 (9%)
Query: 22 KFSRINDAQKLFDEMPERNVISWSALIS-------------------------------G 50
+ R+ +A+++FD MP R++I+W+++IS G
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105
Query: 51 FSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELN 110
+ ++G A F M LE N + +S GD + R++ + +
Sbjct: 106 YGRLGRVLEARRVFDGM----LERNTVAWNAMISCYVQNGDITMAR----RLFDAMPSRD 157
Query: 111 SHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK 170
N ++ Y + A+ +F+ ERN +SW ++S Y + H IF +
Sbjct: 158 VSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHR 217
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK-CEKLD 229
G+ + + AS L A LGNL V + L K E D + ++N+Y++ LD
Sbjct: 218 EGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLD 277
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A + F ++ + WS +I + G+ ID + ++ + S + ++ A
Sbjct: 278 TAIKFFESMIERNEYTWSTMIAALSHGGR----IDAAIAVYERDPVKSIACRTALITGLA 333
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
R L I + S+ N ++ Y + ++ E+ + FD+M + +SW
Sbjct: 334 QCGRIDDARILFEQIPEPIVVSW----NALITGYMQNGMVNEAKELFDKMPFRNTISWAG 389
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+IAG+ + EA+ LL+++ G P+L + ++I S+I A+E G Q H VK G
Sbjct: 390 MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVG 449
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
N +AL+ MY KC + AR+VF + +K++VSWN+ L Q+ L EA +
Sbjct: 450 CQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTF- 508
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
+N + +D ++ ++SA H E F +M +H
Sbjct: 509 ---DNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEH 546
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 204/435 (46%), Gaps = 55/435 (12%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
P V+++N L+ Y++ +N+A++LFD+MP RN ISW+ +I+G++Q G E AL +
Sbjct: 350 EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQE 409
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC-- 124
+ + P+ + AC++ +G ++H + G + NS N LI MYGKC
Sbjct: 410 LHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRN 469
Query: 125 -----------------------------GLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
LL A+ FD L R+ +SW +++S+Y
Sbjct: 470 MEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHA 529
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASV----LGACAVLGNLKVGMQIHSLVFKCALEFD 211
+ + F K+ E + + LG C LG K+G QIH++ K ++ +
Sbjct: 530 EQSNEAMGAF----KTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSE 585
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
VA LI++Y KC D + R+F ++ D+ W+ +I GYAQ G EAI ++ M S
Sbjct: 586 LIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMES 644
Query: 272 SGLMPSEVTFSYVLGAFAD---VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
+G++P+EVTF +L A + V E G + S+ G + ++D +
Sbjct: 645 AGVLPNEVTFVGLLNACSHAGLVDE--GWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGD 702
Query: 329 LEESLK-TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK---DMLFEGHCPNLYTYSN 384
++ + + +D E D V W+AL L +C + E+ K + LF N Y
Sbjct: 703 VQGAEQFIYDMPIEPDTVIWSAL----LGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVM 758
Query: 385 ILNISSDIPAIEWGK 399
+ NI S + WG+
Sbjct: 759 LSNIYSSLGM--WGE 771
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 125/540 (23%), Positives = 229/540 (42%), Gaps = 73/540 (13%)
Query: 112 HVSNC--LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
VS C I G+ G + A+ VFDA R+ I+W S++S+YC G ++
Sbjct: 33 EVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY---- 88
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHS-LVFKCALEFDKFVAMGLINLYAKCEKL 228
AIS + + GA + G ++G + + VF LE + +I+ Y + +
Sbjct: 89 ---DAISGGNMRT--GAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDI 143
Query: 229 DLASRVFS-------------------NIQLPD------------LTAWSALIGGYAQLG 257
+A R+F ++Q+ D L +W+ +I GY ++
Sbjct: 144 TMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIE 203
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+A D+F KM GL+P + F+ L A + L L +K GF +
Sbjct: 204 NHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGT 263
Query: 318 TVLDFYSK-CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
+L+ YS+ +L+ ++K F+ M E + +W+ +I A+ +G I+ +
Sbjct: 264 AILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMI----AALSHGGRIDAAIAVYERDPV 319
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
++ + ++ + I+ + I +P VV +AL+ Y + G +N+A+++
Sbjct: 320 KSIACRTALITGLAQCGRIDDARILFEQIPEP----IVVSWNALITGYMQNGMVNEAKEL 375
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
FD + +N +SW M+ GYAQ+G EAL + + + + P+ ++ + AC +I +
Sbjct: 376 FDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVAL 435
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR-----RAYEFIK---SSPIEPNK 548
E G + ++ + + FAC R E+ + S + +
Sbjct: 436 ETGTQVHSLAVK----------VGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDI 485
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
V W L+ + L R + +LS D D S ++S YA A +E K M
Sbjct: 486 VSWNSFLAALVQNDLLDEARNTFDNMLSRD--DVSWTTIIS-AYAHAEQSNEAMGAFKTM 542
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/693 (30%), Positives = 370/693 (53%), Gaps = 41/693 (5%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V ++N +L Y ++ DA+ LF++MPERN++SW+ +ISG+ +I A + F M
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMH 216
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK-CGLL 127
L P+ + A+SA G+ + + ++G E + + ++N+Y + +L
Sbjct: 217 REGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVL 276
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+A F++ +ERN +W +++++ G + ++ +A + + L C
Sbjct: 277 DTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRT-ALITGLAQC 335
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ + ++ +F+ E LI Y + ++ A +F + + +W+
Sbjct: 336 GRIDDARI-------LFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWA 388
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+I GYAQ G++ EA+ L ++ SG++PS + + + A +++ G Q+HSL +K+
Sbjct: 389 GMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKV 448
Query: 308 GFSSFTFVANTVLDFYSKC-------------------------------ELLEESLKTF 336
G +F N ++ Y KC +LL+E+ TF
Sbjct: 449 GCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTF 508
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
D M D VSW +I+ + + EA+ K M E PN + +L + + A +
Sbjct: 509 DNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASK 568
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G+Q H +K G DS +++ +AL+ MY KCG D+R++FD + +++ +WNT++ GYA
Sbjct: 569 IGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYA 627
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
QHGLGREA+++Y M+ + PN+ TF+G+L+AC H GLV+EGW +F SM +D+G++P
Sbjct: 628 QHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLP 687
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
+H A +V L G + A +FI PIEP+ V+W LL CK HK+ +G+ AAEK+
Sbjct: 688 EHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFR 747
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRF 636
+P + ++MLSN+Y+ MW E A+VRKIMK++ + K+ GCSWT++++KMH F T
Sbjct: 748 IEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDK 807
Query: 637 AQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
Q ++ + +L L GYVPD + H
Sbjct: 808 QHEQIEEIVATLEELYTLLKATGYVPDTEFVLH 840
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 230/521 (44%), Gaps = 52/521 (9%)
Query: 22 KFSRINDAQKLFDEMPERNVISWSALIS-------------------------------G 50
+ R+ +A+++FD MP R++I+W+++IS G
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105
Query: 51 FSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELN 110
+ ++G A F M LE N + +S GD + R++ + +
Sbjct: 106 YGRLGRVLEARRVFDGM----LERNTVAWNAMISCYVQNGDITMAR----RLFDAMPSRD 157
Query: 111 SHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK 170
N ++ Y + A+ +F+ ERN +SW ++S Y + H IF +
Sbjct: 158 VSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHR 217
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK-CEKLD 229
G+ + + AS L A LGNL V + L K E D + ++N+Y++ LD
Sbjct: 218 EGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLD 277
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A + F ++ + WS +I + G+ ID + ++ + S + ++ A
Sbjct: 278 TAIKFFESMIERNEYTWSTMIAALSHGGR----IDAAIAVYERDPVKSIACRTALITGLA 333
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
R L I + S+ N ++ Y + ++ E+ + FD+M + +SW
Sbjct: 334 QCGRIDDARILFEQIPEPIVVSW----NALITGYMQNGMVNEAKELFDKMPFRNTISWAG 389
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+IAG+ + EA+ LL+++ G P+L + ++I S+I A+E G Q H VK G
Sbjct: 390 MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVG 449
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
N +AL+ MY KC + AR+VF + +K++VSWN+ L Q+ L EA +
Sbjct: 450 CQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTF- 508
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
+N + +D ++ ++SA H E F +M +H
Sbjct: 509 ---DNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEH 546
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 204/435 (46%), Gaps = 55/435 (12%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
P V+++N L+ Y++ +N+A++LFD+MP RN ISW+ +I+G++Q G E AL +
Sbjct: 350 EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQE 409
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC-- 124
+ + P+ + AC++ +G ++H + G + NS N LI MYGKC
Sbjct: 410 LHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRN 469
Query: 125 -----------------------------GLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
LL A+ FD L R+ +SW +++S+Y
Sbjct: 470 MEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHA 529
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASV----LGACAVLGNLKVGMQIHSLVFKCALEFD 211
+ + F K+ E + + LG C LG K+G QIH++ K ++ +
Sbjct: 530 EQSNEAMGAF----KTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSE 585
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
VA LI++Y KC D + R+F ++ D+ W+ +I GYAQ G EAI ++ M S
Sbjct: 586 LIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMES 644
Query: 272 SGLMPSEVTFSYVLGAFAD---VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
+G++P+EVTF +L A + V E G + S+ G + ++D +
Sbjct: 645 AGVLPNEVTFVGLLNACSHAGLVDE--GWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGD 702
Query: 329 LEESLK-TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK---DMLFEGHCPNLYTYSN 384
++ + + +D E D V W+AL L +C + E+ K + LF N Y
Sbjct: 703 VQGAEQFIYDMPIEPDTVIWSAL----LGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVM 758
Query: 385 ILNISSDIPAIEWGK 399
+ NI S + WG+
Sbjct: 759 LSNIYSSLGM--WGE 771
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 125/540 (23%), Positives = 229/540 (42%), Gaps = 73/540 (13%)
Query: 112 HVSNC--LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
VS C I G+ G + A+ VFDA R+ I+W S++S+YC G ++
Sbjct: 33 EVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY---- 88
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHS-LVFKCALEFDKFVAMGLINLYAKCEKL 228
AIS + + GA + G ++G + + VF LE + +I+ Y + +
Sbjct: 89 ---DAISGGNMRT--GAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDI 143
Query: 229 DLASRVFS-------------------NIQLPD------------LTAWSALIGGYAQLG 257
+A R+F ++Q+ D L +W+ +I GY ++
Sbjct: 144 TMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIE 203
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+A D+F KM GL+P + F+ L A + L L +K GF +
Sbjct: 204 NHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGT 263
Query: 318 TVLDFYSK-CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
+L+ YS+ +L+ ++K F+ M E + +W+ +I A+ +G I+ +
Sbjct: 264 AILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMI----AALSHGGRIDAAIAVYERDPV 319
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
++ + ++ + I+ + I +P VV +AL+ Y + G +N+A+++
Sbjct: 320 KSIACRTALITGLAQCGRIDDARILFEQIPEP----IVVSWNALITGYMQNGMVNEAKEL 375
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
FD + +N +SW M+ GYAQ+G EAL + + + + P+ ++ + AC +I +
Sbjct: 376 FDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVAL 435
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR-----RAYEFIK---SSPIEPNK 548
E G + ++ + + FAC R E+ + S + +
Sbjct: 436 ETGTQVHSLAVK----------VGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDI 485
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
V W L+ + L R + +LS D D S ++S YA A +E K M
Sbjct: 486 VSWNSFLAALVQNDLLDEARNTFDNMLSRD--DVSWTTIIS-AYAHAEQSNEAMGAFKTM 542
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/643 (33%), Positives = 357/643 (55%), Gaps = 4/643 (0%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A K+F N+ +W+ ++ F G A++ F+ ++ + + T V +SA
Sbjct: 847 AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVG 906
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
D G++IH + +S VSN L+NMY K G++ +A+ F S E + ISW ++
Sbjct: 907 ADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTM 966
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN---LKVGMQIHSLVFK 205
+SSY Q + + F + G+ +F+ ASVL AC+ +G Q+H K
Sbjct: 967 ISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIK 1026
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
C + D FV+ LI+LY+K K+D A + DL +W+A++ GY + K+ +A++
Sbjct: 1027 CGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEH 1086
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F M G+ E+T + + A + G+Q+ + IK+GF++ +V++ VLD Y K
Sbjct: 1087 FSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIK 1146
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C + +L+ F E+ D V+W +I+G++ + A+ + M G P+ YT++ +
Sbjct: 1147 CGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATL 1206
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
+ SS + A+E GKQ H +VK + + +G++LVDMY KCG + DA +VF + + +
Sbjct: 1207 IKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKV 1266
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
V WN ML+G AQHG EAL ++ MQ N I+P+ TFIGVLSAC H GL E + YF++
Sbjct: 1267 VFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDA 1326
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
M + +GI+P ++H + +V G+ + A I S P + + ++R LL C+T D
Sbjct: 1327 MFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAE 1386
Query: 566 LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQ 625
+ A+K+L+ DP D+SA+++LSN+YA + WD+ R +MK K++KKD G SW +++
Sbjct: 1387 TAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVK 1446
Query: 626 NKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF-DGGYVPDPIYS 667
NK+H F + Q ++E + L + +G YVPD ++
Sbjct: 1447 NKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFT 1489
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 147/591 (24%), Positives = 274/591 (46%), Gaps = 37/591 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP--E 58
++TSG P+ N+L+ MY K + A+++FD+ +R++++W+++++ ++Q E
Sbjct: 637 IVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYE 696
Query: 59 VALNYFRLMVCCV---LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
L FRL T + C G + + +HG + G EL+ VS
Sbjct: 697 NVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSG 756
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
L+N+Y K GL+ A+ +FD ER+++ W +L +Y + L+ F +SG
Sbjct: 757 ALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXP 816
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ V+G V ++ + H+ E K AM + D S +F
Sbjct: 817 DFSNLHCVIG--GVNSDVSNNRKRHA-------EQVKAYAMKMF-------PFDQGSNIF 860
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
AW+ + + G+ AID F + S + VT +L A +
Sbjct: 861 ---------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLD 911
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G Q+H+L+IK F+ V+N++++ YSK ++ + KTF E D++SWN +I+ +
Sbjct: 912 LGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYA 971
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW---GKQTHCCIVKPGFDS 412
+ EAI +D+L +G P+ +T +++L S E+ G Q H +K G +
Sbjct: 972 QNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIIN 1031
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+ + +AL+D+Y+K G++++A + +L SWN ++ GY + R+ALE +S+M
Sbjct: 1032 DSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMH 1091
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
E I ++ T + A + +++G I+ G + + + V+ ++ G
Sbjct: 1092 EMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIK-LGFNNDLWVSSGVLDMYIKCGDM 1150
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPED 581
A E P++V W ++SG +D L Y ++ P++
Sbjct: 1151 PNALELFGEIS-RPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDE 1200
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 190/407 (46%), Gaps = 32/407 (7%)
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
D + GK H R+ SG + +++N LI MY KCG L SA+ VFD S +R+ ++W S+L
Sbjct: 625 ADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSIL 684
Query: 150 SSYCQCGEH-----VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF 204
++Y Q + + G ++F L R+ G +I+ + A +L C + G ++V +H
Sbjct: 685 AAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
K E D FV+ L+N+Y K + A +F + D W+ ++ Y + EA+
Sbjct: 745 KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR 804
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAF-ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
F SG P V+G +DV R+ H+ +K
Sbjct: 805 FFSAFHRSGFXPDFSNLHCVIGGVNSDVSNN---RKRHAEQVKA---------------- 845
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
++K F ++ +WN + L + AI+ K +L + T
Sbjct: 846 -------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLV 898
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
IL+ + ++ G+Q H ++K F V + ++L++MY+K G + A K F +
Sbjct: 899 IILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPEL 958
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+L+SWNTM+ YAQ+ L EA+ + + + +KP+ T VL AC
Sbjct: 959 DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 147/272 (54%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ +Y K ++++A+ L + ++ SW+A++ G+ + AL +F LM + +
Sbjct: 1039 LIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPID 1098
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
T A+ A + + GK+I + G + VS+ +++MY KCG + +A +F
Sbjct: 1099 EITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFG 1158
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+ ++W +++S Y + G+ H L ++ L R SGV E++ A+++ A + L L+
Sbjct: 1159 EISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQ 1218
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G QIH+ V K D FV L+++Y KC + A RVF + + + W+A++ G AQ
Sbjct: 1219 GKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQ 1278
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
G EA++LF M S+G+ P +VTF VL A
Sbjct: 1279 HGHVDEALNLFRTMQSNGIQPDKVTFIGVLSA 1310
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 135/288 (46%), Gaps = 9/288 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF+ ++ + +L MY+K + +A +LF E+ + ++W+ +ISG+ + G + AL
Sbjct: 1126 IKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHAL 1185
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ + LM ++P+ YT+ + A + GK+IH + + L+ V L++MY
Sbjct: 1186 SVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMY 1245
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A VF R + W ++L Q G L +F + +G+ + +
Sbjct: 1246 CKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFI 1305
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKC---ALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
VL AC+ G + +FK E + + L++ + ++ A V +++
Sbjct: 1306 GVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSC--LVDALGRAGRIQEAENVIASM 1363
Query: 239 QL-PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
+ + AL+G G A A + K+ + L PS+ + +YVL
Sbjct: 1364 PFKASASMYRALLGACRTKGDAETAKRVADKLLA--LDPSDSS-AYVL 1408
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 160/380 (42%), Gaps = 46/380 (12%)
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ +LK+G + H+ + D+++ LI +Y+KC L A +VF DL W++
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 249 LIGGYAQLGKAC-----EAIDLFVKMFSSGLMPSEVT-----FSYVLGAFADVKETIGGR 298
++ YAQ + E LF + G + +T +L F V ET+
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV--- 739
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
H +K+GF FV+ +++ Y K L+ ++ FD+M E D V WN ++ ++ +
Sbjct: 740 --HGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENS 797
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI--VKPGFDSNVVI 416
EA+ G P+ +SN+ HC I V +N
Sbjct: 798 FQDEALRFFSAFHRSGFXPD---FSNL----------------HCVIGGVNSDVSNNRKR 838
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ V YA K+F N+ +WN L + G A++ + + + I
Sbjct: 839 HAEQVKAYAM--------KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTI 890
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
+ T + +LSA V ++ G ++++ +P + S++++++ G A
Sbjct: 891 GHDSVTLVIILSAAVGADDLDLG-EQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949
Query: 537 EFIKSSPIEPNKVVWRCLLS 556
+ +SP E + + W ++S
Sbjct: 950 KTFINSP-ELDLISWNTMIS 968
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/643 (33%), Positives = 357/643 (55%), Gaps = 4/643 (0%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A K+F N+ +W+ ++ F G A++ F+ ++ + + T V +SA
Sbjct: 847 AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVG 906
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
D G++IH + +S VSN L+NMY K G++ +A+ F S E + ISW ++
Sbjct: 907 ADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTM 966
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN---LKVGMQIHSLVFK 205
+SSY Q + + F + G+ +F+ ASVL AC+ +G Q+H K
Sbjct: 967 ISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIK 1026
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
C + D FV+ LI+LY+K K+D A + DL +W+A++ GY + K+ +A++
Sbjct: 1027 CGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEH 1086
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F M G+ E+T + + A + G+Q+ + IK+GF++ +V++ VLD Y K
Sbjct: 1087 FSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIK 1146
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C + +L+ F E+ D V+W +I+G++ + A+ + M G P+ YT++ +
Sbjct: 1147 CGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATL 1206
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
+ SS + A+E GKQ H +VK + + +G++LVDMY KCG + DA +VF + + +
Sbjct: 1207 IKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKV 1266
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
V WN ML+G AQHG EAL ++ MQ N I+P+ TFIGVLSAC H GL E + YF++
Sbjct: 1267 VFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDA 1326
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
M + +GI+P ++H + +V G+ + A I S P + + ++R LL C+T D
Sbjct: 1327 MFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAE 1386
Query: 566 LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQ 625
+ A+K+L+ DP D+SA+++LSN+YA + WD+ R +MK K++KKD G SW +++
Sbjct: 1387 TAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVK 1446
Query: 626 NKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF-DGGYVPDPIYS 667
NK+H F + Q ++E + L + +G YVPD ++
Sbjct: 1447 NKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFT 1489
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 147/591 (24%), Positives = 274/591 (46%), Gaps = 37/591 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP--E 58
++TSG P+ N+L+ MY K + A+++FD+ +R++++W+++++ ++Q E
Sbjct: 637 IVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYE 696
Query: 59 VALNYFRLMVCCV---LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
L FRL T + C G + + +HG + G EL+ VS
Sbjct: 697 NVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSG 756
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
L+N+Y K GL+ A+ +FD ER+++ W +L +Y + L+ F +SG
Sbjct: 757 ALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFP 816
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ V+G V ++ + H+ E K AM + D S +F
Sbjct: 817 DFSNLHCVIG--GVNSDVSNNRKRHA-------EQVKAYAMKMF-------PFDQGSNIF 860
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
AW+ + + G+ AID F + S + VT +L A +
Sbjct: 861 ---------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLD 911
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G Q+H+L+IK F+ V+N++++ YSK ++ + KTF E D++SWN +I+ +
Sbjct: 912 LGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYA 971
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW---GKQTHCCIVKPGFDS 412
+ EAI +D+L +G P+ +T +++L S E+ G Q H +K G +
Sbjct: 972 QNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIIN 1031
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+ + +AL+D+Y+K G++++A + +L SWN ++ GY + R+ALE +S+M
Sbjct: 1032 DSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMH 1091
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
E I ++ T + A + +++G I+ G + + + V+ ++ G
Sbjct: 1092 EMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIK-LGFNNDLWVSSGVLDMYIKCGDM 1150
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPED 581
A E P++V W ++SG +D L Y ++ P++
Sbjct: 1151 PNALELFGEIS-RPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDE 1200
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 190/407 (46%), Gaps = 32/407 (7%)
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
D + GK H R+ SG + +++N LI MY KCG L SA+ VFD S +R+ ++W S+L
Sbjct: 625 ADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSIL 684
Query: 150 SSYCQCGEH-----VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF 204
++Y Q + + G ++F L R+ G +I+ + A +L C + G ++V +H
Sbjct: 685 AAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
K E D FV+ L+N+Y K + A +F + D W+ ++ Y + EA+
Sbjct: 745 KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR 804
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAF-ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
F SG P V+G +DV R+ H+ +K
Sbjct: 805 FFSAFHRSGFFPDFSNLHCVIGGVNSDVSNN---RKRHAEQVKA---------------- 845
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
++K F ++ +WN + L + AI+ K +L + T
Sbjct: 846 -------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLV 898
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
IL+ + ++ G+Q H ++K F V + ++L++MY+K G + A K F +
Sbjct: 899 IILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPEL 958
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+L+SWNTM+ YAQ+ L EA+ + + + +KP+ T VL AC
Sbjct: 959 DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 147/272 (54%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ +Y K ++++A+ L + ++ SW+A++ G+ + AL +F LM + +
Sbjct: 1039 LIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPID 1098
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
T A+ A + + GK+I + G + VS+ +++MY KCG + +A +F
Sbjct: 1099 EITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFG 1158
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+ ++W +++S Y + G+ H L ++ L R SGV E++ A+++ A + L L+
Sbjct: 1159 EISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQ 1218
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G QIH+ V K D FV L+++Y KC + A RVF + + + W+A++ G AQ
Sbjct: 1219 GKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQ 1278
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
G EA++LF M S+G+ P +VTF VL A
Sbjct: 1279 HGHVDEALNLFRTMQSNGIQPDKVTFIGVLSA 1310
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 135/288 (46%), Gaps = 9/288 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF+ ++ + +L MY+K + +A +LF E+ + ++W+ +ISG+ + G + AL
Sbjct: 1126 IKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHAL 1185
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ + LM ++P+ YT+ + A + GK+IH + + L+ V L++MY
Sbjct: 1186 SVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMY 1245
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A VF R + W ++L Q G L +F + +G+ + +
Sbjct: 1246 CKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFI 1305
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKC---ALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
VL AC+ G + +FK E + + L++ + ++ A V +++
Sbjct: 1306 GVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSC--LVDALGRAGRIQEAENVIASM 1363
Query: 239 QL-PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
+ + AL+G G A A + K+ + L PS+ + +YVL
Sbjct: 1364 PFKASASMYRALLGACRTKGDAETAKRVADKLLA--LDPSDSS-AYVL 1408
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 160/380 (42%), Gaps = 46/380 (12%)
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ +LK+G + H+ + D+++ LI +Y+KC L A +VF DL W++
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 249 LIGGYAQLGKAC-----EAIDLFVKMFSSGLMPSEVT-----FSYVLGAFADVKETIGGR 298
++ YAQ + E LF + G + +T +L F V ET+
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV--- 739
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
H +K+GF FV+ +++ Y K L+ ++ FD+M E D V WN ++ ++ +
Sbjct: 740 --HGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENS 797
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI--VKPGFDSNVVI 416
EA+ G P+ +SN+ HC I V +N
Sbjct: 798 FQDEALRFFSAFHRSGFFPD---FSNL----------------HCVIGGVNSDVSNNRKR 838
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ V YA K+F N+ +WN L + G A++ + + + I
Sbjct: 839 HAEQVKAYAM--------KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTI 890
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
+ T + +LSA V ++ G ++++ +P + S++++++ G A
Sbjct: 891 GHDSVTLVIILSAAVGADDLDLG-EQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949
Query: 537 EFIKSSPIEPNKVVWRCLLS 556
+ +SP E + + W ++S
Sbjct: 950 KTFINSP-ELDLISWNTMIS 968
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/659 (30%), Positives = 357/659 (54%), Gaps = 29/659 (4%)
Query: 12 TYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
++N ++ Y R+N+A+KLF E P R+ I+WS+LISG+ + G AL F M
Sbjct: 74 SWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEG 133
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
PN +T+ + C+ GK+IH ++ + N+ V L++MY KC + A+
Sbjct: 134 ERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAE 193
Query: 132 FVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
++F+ A +RN + W ++++ Y Q G+ ++ F R G+ ++F+ S+L AC +
Sbjct: 194 YLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSI 253
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G Q+H + + + FV L+++Y+KC L A R+ +++ D +W+++I
Sbjct: 254 SACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMI 313
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
G + G EA+ LF M + E T+ VL F+ V + +HSLI+K GF
Sbjct: 314 VGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFE 373
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
++ V N ++D Y+K + + F++M + DV+SW +L+ G + + Y EA+ L +M
Sbjct: 374 AYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEM 433
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
G P+ + +L+ +++ +E+GKQ H +K G S++ + ++LV MYAKCG +
Sbjct: 434 RIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCI 493
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
DA KVFD + +++++W ++VGYAQ+G GR+
Sbjct: 494 EDANKVFDSMEIQDVITWTALIVGYAQNGRGRD--------------------------- 526
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
H GLVE G YF SM +GI P +H A ++ L G+ A E + ++P+ V
Sbjct: 527 -HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATV 585
Query: 551 WRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
W+ LL+ C+ H ++ LG AA + +P++ +++LSN+Y+ A W+E AK R++MK
Sbjct: 586 WKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKL 645
Query: 611 KSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ + K+ GCSW E+ +K+H F + + + +++ ++++ + + + GYVPD ++ H
Sbjct: 646 RGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALH 704
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 237/481 (49%), Gaps = 33/481 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE-RNVISWSALISGFSQIGMPEVA 60
I + F N L+ MY K I +A+ LF+ P+ RN + W+A+++G+SQ G A
Sbjct: 165 IKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKA 224
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ FR M +E N +T+ ++AC S G ++HG + RSG N V + L++M
Sbjct: 225 IECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDM 284
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG LS+A+ + + + +SW S++ + G L +F + + I EF+
Sbjct: 285 YSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTY 344
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL + + +++ M +HSL+ K E K V L+++YAK D A VF +
Sbjct: 345 PSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTD 404
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W++L+ G G EA+ LF +M G+ P ++ + VL A A++ G+Q+
Sbjct: 405 KDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQV 464
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +K G S V N+++ Y+KC +E++ K FD M+ DV++W ALI G+ +
Sbjct: 465 HANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRG 524
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ L++ + ++ I+ G + + C +
Sbjct: 525 RDHAGLVEHG------------RSYFQSMEEVYGIKPGPEHYAC---------------M 557
Query: 421 VDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG---LG-REALEIYSMMQENK 475
+D+ + G+L +A+++ + ++ + + W +L HG LG R A ++ + +N
Sbjct: 558 IDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNA 617
Query: 476 I 476
+
Sbjct: 618 V 618
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 197/405 (48%), Gaps = 35/405 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF NV + L+ MY K +++A+++ + M + +SW+++I G + G+ E A
Sbjct: 266 IVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEA 325
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR+M ++ + +TY ++ + D R+ +H + ++G E V+N L++M
Sbjct: 326 LSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDM 385
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G A VF+ +++ ISW SL++ G + L++F R G+ +
Sbjct: 386 YAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVI 445
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+VL ACA L L+ G Q+H+ K L V L+++YAKC ++ A++VF ++++
Sbjct: 446 AAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEI 505
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+ALI GYAQ G+ + +GL+ ++ F ++E G
Sbjct: 506 QDVITWTALIVGYAQNGRGRD---------HAGLVEHGRSY------FQSMEEVYG---- 546
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCH 359
IK G + ++D + L E+ + ++M + D W AL LA+C
Sbjct: 547 ----IKPGPEHYA----CMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL----LAACR 594
Query: 360 YGEAIEL---LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
+EL + LFE N Y + N+ S E +T
Sbjct: 595 VHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKT 639
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 47/197 (23%)
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM----------- 451
C V DSN V+ + +KCGR++DARK+FD + ++ SWNTM
Sbjct: 35 CGTVHSSSDSNWVLSN-----LSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLN 89
Query: 452 --------------------LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
+ GY ++G EALE++ MQ +PN T+ VL C
Sbjct: 90 EARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCS 149
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDH----IASVVHLFA-CRGQTRRAYEFIKSSPIEP 546
L+E+G I H I + D + +V ++A C+ Y F + +P +
Sbjct: 150 MYVLLEKG-----KQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLF-ELAPDKR 203
Query: 547 NKVVWRCLLSGCKTHKD 563
N V+W +++G + D
Sbjct: 204 NHVLWTAMVTGYSQNGD 220
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/646 (32%), Positives = 362/646 (56%), Gaps = 1/646 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L +Y+ +++ A++LFDE+P +VI W+ +I ++ G + A++ + M+ + PN
Sbjct: 49 LTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPN 108
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
YTY + AC+ G EIH GLE + V L++ Y KCG+L AQ +F
Sbjct: 109 KYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFS 168
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+ R+ ++W ++++ G +++ + ++ G+ + + VL L
Sbjct: 169 SMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGH 228
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +H + + + V GL+++YAKC+ L A ++F + + + +WSA+IGGY
Sbjct: 229 GKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVX 288
Query: 256 LGKACEAIDLFVKMFSSGLM-PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
EA++LF +M M P+ VT VL A A + + GR+LH IIK+G
Sbjct: 289 SDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDIL 348
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
+ NT+L Y+KC +++++++ FD M+ D VS++A+++G + + + A+ + + M G
Sbjct: 349 LGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSG 408
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P+L T +L S + A++ G +H ++ GF ++ +I +AL+DMY+KCG+++ AR
Sbjct: 409 IDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAR 468
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+VF+ + ++VSWN M++GY HGLG EAL ++ + +KP+D TFI +LS+C H G
Sbjct: 469 EVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSG 528
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
LV EG +F++M RD I PRM+H +V + G A+ FI++ P EP+ +W L
Sbjct: 529 LVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSAL 588
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
LS C+ HK++ LG ++KI S PE T ++LSN+Y+ A WD+ A +R K+ LK
Sbjct: 589 LSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLK 648
Query: 615 KDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
K GCSW E+ +H F + Q ++ + +L V + GY
Sbjct: 649 KIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGY 694
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/424 (30%), Positives = 222/424 (52%), Gaps = 1/424 (0%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
Y+ + AC K+IH ++ +S V + L +Y C + A+ +FD
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+ I W ++ +Y G + ++ GV ++++ VL AC+ L ++ G+
Sbjct: 70 PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
+IHS LE D FV L++ YAKC L A R+FS++ D+ AW+A+I G + G
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+A+ L ++M G+ P+ T VL + K G+ LH ++ F + V
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF-EGHC 376
+LD Y+KC+ L + K FD M + VSW+A+I G++ S EA+EL M+ +
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMD 309
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P T ++L + + + G++ HC I+K G ++++G+ L+ MYAKCG ++DA +
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRF 369
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
FD ++ K+ VS++ ++ G Q+G AL I+ MMQ + I P+ T +GVL AC H+ +
Sbjct: 370 FDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429
Query: 497 EEGW 500
+ G+
Sbjct: 430 QHGF 433
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 189/384 (49%), Gaps = 1/384 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V L+ Y K + +AQ+LF M R+V++W+A+I+G S G+ + A+
Sbjct: 139 GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLI 198
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M + PN T VG + GK +HG R + V L++MY KC
Sbjct: 199 MQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKC 258
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASV 183
L A+ +FD RN +SW +++ Y L++F + K + + + SV
Sbjct: 259 QCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSV 318
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L ACA L +L G ++H + K D + L+++YAKC +D A R F + D
Sbjct: 319 LRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDS 378
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
++SA++ G Q G A A+ +F M SG+ P T VL A + + G H
Sbjct: 379 VSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGY 438
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+I GF++ T + N ++D YSKC + + + F+ MD HD+VSWNA+I G+ EA
Sbjct: 439 LIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEA 498
Query: 364 IELLKDMLFEGHCPNLYTYSNILN 387
+ L D+L G P+ T+ +L+
Sbjct: 499 LGLFHDLLALGLKPDDITFICLLS 522
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 179/372 (48%), Gaps = 15/372 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ F V+ LL MY K + A+K+FD M RN +SWSA+I G+ + AL
Sbjct: 237 VRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEAL 296
Query: 62 NYFRLMVCC-VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M+ ++P T + ACA D G+++H + + G L+ + N L++M
Sbjct: 297 ELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSM 356
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG++ A FD ++S+S+ +++S Q G L IF + + SG+ +
Sbjct: 357 YAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTM 416
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
VL AC+ L L+ G H + D + LI++Y+KC K+ A VF+ +
Sbjct: 417 LGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDR 476
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+A+I GY G EA+ LF + + GL P ++TF +L + + + GR
Sbjct: 477 HDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLW 536
Query: 301 HSLIIKMGFSSFTFVANT-----VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGH 354
+ + F+ V ++D + L++E+ M E DV W+AL
Sbjct: 537 FDAMSR----DFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSAL---- 588
Query: 355 LASCHYGEAIEL 366
L++C + IEL
Sbjct: 589 LSACRIHKNIEL 600
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 6/254 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G +++ N LL MY K I+DA + FD M ++ +S+SA++SG Q G VA
Sbjct: 338 IIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVA 397
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR+M ++P+ T +G + AC+ + G HG + G ++ + N LI+M
Sbjct: 398 LSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDM 457
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG +S A+ VF+ + +SW +++ Y G + L +F G+ + +
Sbjct: 458 YSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITF 517
Query: 181 ASVLGACAVLGNLKVG---MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+L +C+ G + G S F + + M +++ + +D A N
Sbjct: 518 ICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICM--VDILGRAGLIDEAHHFIRN 575
Query: 238 IQL-PDLTAWSALI 250
+ PD+ WSAL+
Sbjct: 576 MPFEPDVRIWSALL 589
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/634 (32%), Positives = 351/634 (55%), Gaps = 3/634 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I SG ++ T N+++ Y K I A K+F E +R+ +SW+ +I+GF +G E AL
Sbjct: 26 IKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETAL 85
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ + M + Y++ + A G G+++H M + G E N + L++MY
Sbjct: 86 EFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMY 145
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + A VF + RNS++W +L+S Y Q G+ + GV I + + A
Sbjct: 146 AKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFA 205
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN-IQL 240
+L K+ Q+H+ + K L D V +I Y++C ++ A RVF I+
Sbjct: 206 PLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIET 265
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL W++++ Y + EA LF++M G P T++ V+ A + G+ L
Sbjct: 266 RDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSL 325
Query: 301 HSLIIKMGFSSFTFVANTVLDFY--SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
H L+IK G ++N+++ Y S + ++E+L F+ ++ D VSWN+++ G S
Sbjct: 326 HGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSG 385
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+A++ ++M + + Y +S +L SD+ ++ G+Q H ++K GF+ N + S
Sbjct: 386 LSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVAS 445
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+L+ MY+KCG + DARK FD + ++WN+++ GYAQHG G+ AL+++ +M++ ++K
Sbjct: 446 SLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKL 505
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ VL+AC HIGLVEEGW + SM D+GI PRM+H A ++ L G+ A
Sbjct: 506 DHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKAL 565
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I++ P EP+ +VW+ LL C+T D+ L A +L +PE+ +++LS+++ W
Sbjct: 566 IEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRW 625
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
+E A ++++MKE+ +KK G SW E++N++ F+
Sbjct: 626 NEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFN 659
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 233/457 (50%), Gaps = 5/457 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ G+ NV + LL MY K R+ DA ++F + RN ++W+ALISG++Q+G A
Sbjct: 126 MVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTA 185
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
M +E + T+ ++ + ++H ++ + GL ++ V N +I
Sbjct: 186 FWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITA 245
Query: 121 YGKCGLLSSAQFVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y +CG + A+ VFD ++E R+ ++W S+L++Y + ++FL + G ++
Sbjct: 246 YSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYT 305
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK--CEKLDLASRVFSN 237
SV+ A + G +H LV K LEF ++ LI +Y K + +D A +F +
Sbjct: 306 YTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFES 365
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
++ D +W++++ G++Q G + +A+ F M S ++ FS VL + +D+ G
Sbjct: 366 LENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLG 425
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+Q+H L++K GF FVA++++ YSKC ++E++ K+FD + ++WN+LI G+
Sbjct: 426 QQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQH 485
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVI 416
A++L M + T+ +L S I +E G + G +
Sbjct: 486 GRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEH 545
Query: 417 GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
+ ++D+ + GRL++A+ + + + + + W T+L
Sbjct: 546 YACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLL 582
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 107/183 (58%)
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L IK G ++ + AN ++ Y+KC + + K F E + D VSWN +IAG + ++
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A+E LK M G + Y++ +IL + + +E G+Q H +VK G++ NV GSAL
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMYAKC R+ DA +VF ++ +N V+WN ++ GYAQ G A + M+ ++ +D
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201
Query: 481 NTF 483
TF
Sbjct: 202 GTF 204
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 86/159 (54%), Gaps = 2/159 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF PN + L+ MY K I DA+K FD P+ + I+W++LI G++Q G ++A
Sbjct: 432 VLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIA 491
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L+ F LM ++ ++ T+V ++AC+ G G M G+ C+I+
Sbjct: 492 LDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMID 551
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGE 157
+ G+ G L A+ + +A E +++ W +LL + CG+
Sbjct: 552 LLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGD 590
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
S A+ HC +K G +++ + ++ YAKCG + A K+F S ++ VSWN
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWN 69
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
TM+ G+ G ALE M+ + +F +L +G VE G +SM+
Sbjct: 70 TMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVG-QQVHSMMVK 128
Query: 510 HGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G + ++++ ++A + A+E KS I N V W L+SG
Sbjct: 129 MGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIR-NSVTWNALISG 175
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/636 (31%), Positives = 355/636 (55%), Gaps = 1/636 (0%)
Query: 33 FDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDA 92
FDE+ + W+ L++ ++ G ++ F+ M+ +E + YT+ + +S
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
G+++HG + +SG + V N L+ Y K + SA+ VFD ER+ ISW S+++ Y
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
G GL +F+ SG+ I + SV CA + +G +HS+ K +
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
L+++Y+KC LD A VF + + +++++I GYA+ G A EA+ LF +M
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G+ P T + VL A + G+++H I + FV+N ++D Y+KC ++E+
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH-CPNLYTYSNILNISSD 391
F EM D++SWN +I G+ +C+ EA+ L +L E P+ T + +L +
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ A + G++ H I++ G+ S+ + ++LVDMYAKCG L A +FD ++SK+LVSW M
Sbjct: 361 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 420
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
+ GY HG G+EA+ +++ M++ I+ ++ +F+ +L AC H GLV+EGW +FN M +
Sbjct: 421 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 480
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA 571
I P ++H A +V + A G +AY FI++ PI P+ +W LL GC+ H D+ L A
Sbjct: 481 IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVA 540
Query: 572 EKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
EK+ +PE+T +++++N+YAEA W++ ++RK + ++ L+K+ GCSW E++ +++ F
Sbjct: 541 EKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIF 600
Query: 632 STSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
+ + ++ + ++ + + GY P Y+
Sbjct: 601 VAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYA 636
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 140/465 (30%), Positives = 238/465 (51%), Gaps = 11/465 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF N L+ Y+K R++ A+K+FDEM ER+VISW+++I+G+ G+ E
Sbjct: 70 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 129
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ +E + T V + CA G+ +H ++ N L++M
Sbjct: 130 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 189
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L SA+ VF +R+ +S+ S+++ Y + G +K+F + G++ ++
Sbjct: 190 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 249
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL CA L G ++H + + L FD FV+ L+++YAKC + A VFS +++
Sbjct: 250 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 309
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +W+ +IGGY++ A EA+ LF + P E T + VL A A + GR+
Sbjct: 310 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 369
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H I++ G+ S VAN+++D Y+KC L + FD++ D+VSW +IAG+
Sbjct: 370 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 429
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSNV 414
EAI L M G + ++ ++L S ++ G + H C ++P +
Sbjct: 430 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 489
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
I VDM A+ G L A + +++ + W +L G H
Sbjct: 490 CI----VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 530
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/648 (30%), Positives = 353/648 (54%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ ++ ++ +++A ++F+ + + + + ++ GF+++ + AL +F M +EP
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
Y + + C + R GKEIHG + +SG L+ L NMY KC ++ A+ VFD
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
ER+ +SW ++++ Y Q G L++ + + S + SVL A + L + V
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +IH + + ++ L+++YAKC L+ A ++F + ++ +W+++I Y Q
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
EA+ +F KM G+ P++V+ L A AD+ + GR +H L +++G V
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
N+++ Y KC+ ++ + F ++ +VSWNA+I G + +A+ M
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+ +TY +++ +++ K H +++ D NV + +ALVDMYAKCG + AR
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+FD +S +++ +WN M+ GY HG G+ ALE++ MQ+ IKPN TF+ V+SAC H GL
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
VE G F M ++ I MDH ++V L G+ A++FI P++P V+ +L
Sbjct: 555 VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML 614
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
C+ HK++ AAE++ +P+D H++L+N+Y A+MW++ +VR M + L+K
Sbjct: 615 GACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRK 674
Query: 616 DTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
GCS E++N++H F + A ++ + +L H+ + GYVPD
Sbjct: 675 TPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPD 722
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 249/459 (54%), Gaps = 3/459 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF ++ L MY K ++N+A+K+FD MPER+++SW+ +++G+SQ GM +A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L + M L+P++ T V + A ++ GKEIHG RSG + ++S L++M
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L +A+ +FD LERN +SW S++ +Y Q + IF GV ++ S
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
L ACA LG+L+ G IH L + L+ + V LI++Y KC+++D A+ +F +Q
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
L +W+A+I G+AQ G+ +A++ F +M S + P T+ V+ A A++ T + +
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H ++++ FV ++D Y+KC + + FD M E V +WNA+I G+
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--S 418
A+EL ++M PN T+ ++++ S +E G + ++K + + +
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYG 579
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
A+VD+ + GRLN+A + K V+ ++G Q
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 250/492 (50%), Gaps = 7/492 (1%)
Query: 72 LEPNYYTYVGAV--SACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
+ N Y + A+ C+S + R +I ++++GL L++++ + G +
Sbjct: 31 IPANVYEHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDE 87
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A VF+ + ++ + ++L + + + L+ F+ R V ++ +L C
Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGD 147
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
L+VG +IH L+ K D F GL N+YAKC +++ A +VF + DL +W+ +
Sbjct: 148 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTI 207
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
+ GY+Q G A A+++ M L PS +T VL A + ++ G+++H ++ GF
Sbjct: 208 VAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF 267
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
S ++ ++D Y+KC LE + + FD M E +VVSWN++I ++ + + EA+ + +
Sbjct: 268 DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQK 327
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
ML EG P + L+ +D+ +E G+ H V+ G D NV + ++L+ MY KC
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKE 387
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
++ A +F L S+ LVSWN M++G+AQ+G +AL +S M+ +KP+ T++ V++A
Sbjct: 388 VDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
+ + + + ++ + + ++V ++A G A I E +
Sbjct: 448 IAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVT 505
Query: 550 VWRCLLSGCKTH 561
W ++ G TH
Sbjct: 506 TWNAMIDGYGTH 517
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/669 (31%), Positives = 359/669 (53%), Gaps = 1/669 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G P+ ++ L+ +YVK + A+++ +EMP ++V W+ +S + + A
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F LM + N + + +SA AS GD G+ IH + + G E + +SN + M
Sbjct: 75 VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K + + F A + N S +LLS +C G +I + G + ++
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L CA G+L G IH V K + D + L+N+YAKC + A +VF I
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 254
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+ALI G+ G + +F +M + G P+ TF +L + + + + G+Q+
Sbjct: 255 RDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 313
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ I+K FV ++D Y+K LE++ F+ + + D+ +W ++AG+
Sbjct: 314 HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQG 373
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A++ M EG PN +T ++ L+ S I ++ G+Q H +K G ++ + SAL
Sbjct: 374 EKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASAL 433
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAKCG + DA VFD L S++ VSWNT++ GY+QHG G +AL+ + M + P++
Sbjct: 434 VDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDE 493
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TFIGVLSAC H+GL+EEG +FNS+ + +GI+P ++H A +V + G+ FI+
Sbjct: 494 VTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIE 553
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+ N ++W +L CK H ++ G AA K+ +PE S +I+LSN++A MWD+
Sbjct: 554 EMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDD 613
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
VR +M + +KK+ GCSW E+ ++H F + + + ++H + L L GY
Sbjct: 614 VTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGY 673
Query: 661 VPDPIYSSH 669
P+ + H
Sbjct: 674 TPNTDHVLH 682
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 239/466 (51%), Gaps = 3/466 (0%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
K+I R+ ++G+ +SH+ + L+N+Y KC L A+ V + ++ W LSS
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
+++F L R + + +++F AS++ A A LG+ G IH+ V K E D ++
Sbjct: 69 YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS 128
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
+ +Y K + ++ + F + + +L + + L+ G+ + + +++ G
Sbjct: 129 NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFE 188
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P+ TF +L A + G+ +H +IK G + + + N++++ Y+KC + K
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKV 248
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F E+ E DVVSW ALI G +A YG + + ML EG PN+YT+ +IL S + +
Sbjct: 249 FGEIPERDVVSWTALITGFVAE-GYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 307
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
+ GKQ H IVK D N +G+ALVDMYAK L DA +F+ L ++L +W ++ GY
Sbjct: 308 DLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGY 367
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
AQ G G +A++ + MQ +KPN+ T LS C I ++ G +SM G S
Sbjct: 368 AQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG-RQLHSMAIKAGQSGD 426
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
M +++V ++A G A E + + + V W ++ G H
Sbjct: 427 MFVASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTIICGYSQH 471
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/619 (33%), Positives = 340/619 (54%), Gaps = 4/619 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG-MPEVALNYFRLMVCCVL 72
N L M+V+F + DA +F +M ERN+ SW+ L+ G+++ G E Y R++ +
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+P+ YT+ + C D GKE+H + R G EL+ V N LI MY KCG + SA+
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
+FD R+ ISW +++S Y + G GL++F R V + SV+ AC +LG+
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
++G IH+ V D V L +Y A ++FS ++ D+ +W+ +I G
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y +AID + M + P E+T + VL A A + + G +LH L IK S+
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
VAN +++ YSKC+ ++++L F + +V+SW ++IAG + EA+ L+ M
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 492
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
PN T + L + I A+ GK+ H +++ G + + +AL+DMY +CGR+N
Sbjct: 493 TLQ-PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A F+ K++ SWN +L GY++ G G +E++ M +++++P++ TFI +L C
Sbjct: 552 AWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
+V +G YF+ M D+G++P + H A VV L G+ + A++FI+ P+ P+ VW
Sbjct: 611 SQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWG 669
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL+ C+ H + LG +A+ I D + +I+L N+YA+ W E AKVR++MKE
Sbjct: 670 ALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENG 729
Query: 613 LKKDTGCSWTELQNKMHYF 631
L D GCSW E++ K+H F
Sbjct: 730 LTVDAGCSWVEVKGKVHAF 748
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/536 (26%), Positives = 248/536 (46%), Gaps = 37/536 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ ++ N L+ MYVK + A+ LFD MP R++ISW+A+ISG+ + GM
Sbjct: 222 VVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEG 281
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M ++P+ T +SAC GD R G++IH + +G ++ V N L M
Sbjct: 282 LELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQM 341
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G A+ +F ++ +SW +++S Y + + + + V E +
Sbjct: 342 YLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITV 401
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+VL ACA LG+L G+++H L K L VA LIN+Y+KC+ +D A +F NI
Sbjct: 402 AAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPR 461
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+++I G + EA+ +F++ L P+ +T + L A A + + G+++
Sbjct: 462 KNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEI 520
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +++ G F+ N +LD Y +C + + F+ + DV SWN L+ G+
Sbjct: 521 HAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQG 579
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+EL M+ P+ T+ ++L S + G + G N+ + +
Sbjct: 580 SMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACV 639
Query: 421 VDMYAKCGRLNDARKVFD---------------------------HLSSKNLVSWNTMLV 453
VD+ + G L +A K LS++++ + V
Sbjct: 640 VDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSV 699
Query: 454 G--------YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
G YA G RE ++ MM+EN + + + VH L ++ +H
Sbjct: 700 GYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYH 755
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 225/520 (43%), Gaps = 46/520 (8%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
+V V C + G +++ S L + N + M+ + G L A +VF
Sbjct: 96 VFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKM 155
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
ERN SW L+ Y + G + ++ + GV ++ VL C + +L G
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
++H V + E D V LI +Y KC + A +F + D+ +W+A+I GY +
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
G E ++LF M + P +T + V+ A + + GR +H+ +I GF+ V
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
N++ Y E+ K F M+ D+VSW +I+G+ + +AI+ + M +
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ T + +L+ + + ++ G + H +K S V++ + L++MY+KC ++ A +
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND---------------- 480
F ++ KN++SW +++ G + EAL I+ + ++PN
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGAL 514
Query: 481 -----------NTFIG--------VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
T +G +L V G + W FNS +D +
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKD------VTSWNI 568
Query: 522 VVHLFACRGQTRRAYEFIK---SSPIEPNKVVWRCLLSGC 558
++ ++ RGQ E S + P+++ + LL GC
Sbjct: 569 LLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 175/352 (49%), Gaps = 1/352 (0%)
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
L C G+ +K+ ++ VA+ E +++ C + G +++S+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+ + ++ + L A VF + +L +W+ L+GGYA+ G EA+ L+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 269 M-FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
M + G+ P TF VL + + G+++H +++ G+ V N ++ Y KC
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
++ + FD M D++SWNA+I+G+ + E +EL M P+L T +++++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ G+ H ++ GF ++ + ++L MY G +A K+F + K++VS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
W TM+ GY + L +A++ Y MM ++ +KP++ T VLSAC +G ++ G
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 124/287 (43%), Gaps = 51/287 (17%)
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQ 472
V +G+A + M+ + G L DA VF +S +NL SWN ++ GYA+ G EA+ +Y M+
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 473 ENKIKPNDNTFIGVLSAC-----------VHIGLVEEGWHY----FNSMIRDH------- 510
+KP+ TF VL C VH+ +V G+ N++I +
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVK 248
Query: 511 ------GISPRMDHIA--SVVHLFACRGQTRRAYEF---IKSSPIEPNKVVWRCLLSGCK 559
PR D I+ +++ + G E ++ ++P+ + ++S C+
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 560 THKDLVLGRYAAEKILSTD-PEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTG 618
D LGR +++T D S L+ +Y A W E K+ M+ K +
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI----- 363
Query: 619 CSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPI 665
SWT + + Y F + ID + +M+Q SV PD I
Sbjct: 364 VSWTTMISGYEY----NFLPDKAIDTYRMMDQDSVK-------PDEI 399
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/658 (33%), Positives = 352/658 (53%), Gaps = 10/658 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFS---QIGMPEVALNYFR 65
++ N LL YVK DA LFDEMPERN +S+ L G++ IG+ Y R
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGL------YSR 136
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
L E N + + + S A +H + + G + N+ V LIN Y CG
Sbjct: 137 LHREG-HELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCG 195
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ SA+ VF+ L ++ + W ++S Y + G LK+ R +G + ++ + L
Sbjct: 196 SVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALK 255
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
A LG +H + K D V +GL+ LY + + A +VF+ + D+
Sbjct: 256 ASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVP 315
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
WS +I + Q G EA+DLF++M + ++P+E T S +L A K + G QLH L++
Sbjct: 316 WSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV 375
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K+GF +V+N ++D Y+KCE ++ ++K F E+ + VSWN +I G+ G+A
Sbjct: 376 KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFS 435
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
+ ++ L T+S+ L + + +++ G Q H +K V + ++L+DMYA
Sbjct: 436 MFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYA 495
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KCG + A+ VF+ + + ++ SWN ++ GY+ HGLGR+AL I +M++ KPN TF+G
Sbjct: 496 KCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLG 555
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
VLS C + GL+++G F SMIRDHGI P ++H +V L GQ +A + I+ P E
Sbjct: 556 VLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYE 615
Query: 546 PNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVR 605
P+ ++WR +LS + R +AE+IL +P+D + ++++SN+YA A W A +R
Sbjct: 616 PSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIR 675
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
K MKE +KK+ G SW E Q +HYFS ++ ++ L++ GYVPD
Sbjct: 676 KSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPD 733
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 250/483 (51%), Gaps = 6/483 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ N L+ Y ++ A+ +F+ + ++++ W+ ++S + + G E +
Sbjct: 172 IVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDS 231
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M PN YT+ A+ A G K +HG++ ++ L+ V L+ +
Sbjct: 232 LKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQL 291
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G +S A VF+ + + + W +++ +CQ G + +F+ R++ V +EF+
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTL 351
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L CA+ +G Q+H LV K + D +V+ LI++YAKCEK+D A ++F+ +
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSS 411
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W+ +I GY LG+ +A +F + + + +EVTFS LGA A + G Q+
Sbjct: 412 KNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQV 471
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L IK + V+N+++D Y+KC ++ + F+EM+ DV SWNALI+G+
Sbjct: 472 HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLG 531
Query: 361 GEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
+A+ +L D++ + C PN T+ +L+ S+ I+ G++ +++ G + + +
Sbjct: 532 RQALRIL-DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYT 590
Query: 419 ALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+V + + G+L+ A K+ + + +++ W ML A E S + KI
Sbjct: 591 CMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAML--SASMNQNNEEFARRSAEEILKIN 648
Query: 478 PND 480
P D
Sbjct: 649 PKD 651
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 149/504 (29%), Positives = 243/504 (48%), Gaps = 29/504 (5%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
+ Y + C + D S K IH + + G L+ +N L+N Y K G A +FD
Sbjct: 50 HAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDE 109
Query: 137 SLERNSISWVSLLSSY-CQCGEHVHGLKIFLLSR--KSGVAISEFSCASVLGACAVLGNL 193
ERN++S+V+L Y CQ I L SR + G ++ S L L
Sbjct: 110 MPERNNVSFVTLAQGYACQ-------DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++ +HS + K + + FV LIN Y+ C +D A VF I D+ W+ ++ Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G +++ L M +G MP+ TF L A + + +H I+K +
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V +L Y++ + ++ K F+EM ++DVV W+ +IA + EA++L M
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN +T S+ILN + G+Q H +VK GFD ++ + +AL+D+YAKC +++ A
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
K+F LSSKN VSWNT++VGY G G +A ++ N++ + TF L AC +
Sbjct: 403 VKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASL 462
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIA------SVVHLFACRGQTRRAYEFIKSSPIEPN 547
++ G ++ HG++ + ++ S++ ++A G + A + +E
Sbjct: 463 ASMDLG-------VQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVF--NEMETI 513
Query: 548 KVV-WRCLLSGCKTHKDLVLGRYA 570
V W L+SG TH LGR A
Sbjct: 514 DVASWNALISGYSTHG---LGRQA 534
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/654 (32%), Positives = 357/654 (54%), Gaps = 1/654 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N +L M V+F A K+F +MPER+V SW+ ++ G+ + G E AL+ + M+
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGAR 192
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT+ + +C D G+E+H + R GL + V N L+ MY KCG + +A+ V
Sbjct: 193 PDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKV 252
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD + ISW ++++ + + E GL++FL + V + + SV A +L +L
Sbjct: 253 FDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDL 312
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+IH+L K D LI +Y+ ++ A VFS ++ D +W+A+I GY
Sbjct: 313 DFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGY 372
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G +A++++ M + + P +VT + L A A + G +LH L GF +
Sbjct: 373 EKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYI 432
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
VAN +++ Y+K +++E++++ F M + DV+SW+++IAG + EA+ + ML +
Sbjct: 433 VVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD 492
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN T+ L + ++ GK+ H +++ G S + +AL+D+Y KCG+ A
Sbjct: 493 VK-PNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYA 551
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
F +K++VSWN ML G+ HG G AL ++ M E P++ TF+ +L C
Sbjct: 552 WAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRA 611
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G+V +GW F+SM + I P + H A +V L + G+ Y FI PI P+ VW
Sbjct: 612 GMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGA 671
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL+GC+ H+++ LG AA+ +L +P D H++LS++YA+A MW E +KVRK M+ K L
Sbjct: 672 LLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGL 731
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
+ D GCSW E++ +H F T + Q ++++V++ + + G+ P YS
Sbjct: 732 EHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYS 785
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 227/489 (46%), Gaps = 11/489 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G V N L+ MY K + A+K+FD M + ISW+A+I+G + E L F
Sbjct: 225 GLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELF 284
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ +EPN T A D KEIH + G + N LI MY
Sbjct: 285 LHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSL 344
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A VF R+++SW +++S Y + G L+++ L + V+ + + AS L
Sbjct: 345 GRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASAL 404
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA LG L VG+++H L VA L+ +YAK + ++ A VF + D+
Sbjct: 405 AACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVI 464
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+WS++I G+ K EA+ F M + + P+ VTF L A A G+++H+ +
Sbjct: 465 SWSSMIAGFCFNHKNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGSLRCGKEIHAHV 523
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
++ G +S +V N +LD Y KC + F DVVSWN ++AG +A H A+
Sbjct: 524 LRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIAL 583
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALVDM 423
+ML G P+ T+ +L S + G + H K N+ + +VD+
Sbjct: 584 SFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDL 643
Query: 424 YAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQENKIKPN 479
++ GRL + + + + + W +L G H LG A +I +++PN
Sbjct: 644 LSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVL-----ELEPN 698
Query: 480 DNTFIGVLS 488
D + +LS
Sbjct: 699 DAGYHVLLS 707
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 237/496 (47%), Gaps = 7/496 (1%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YV C R A G G + + N +++M + G A V
Sbjct: 92 PDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKV 151
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F ER+ SW ++ Y + G L ++ +G ++ VL +C + +L
Sbjct: 152 FAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDL 211
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G ++H+ V + L + V L+ +YAKC ++ A +VF + L D +W+A+I G+
Sbjct: 212 TMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGH 271
Query: 254 AQLGKACEA-IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
+ CEA ++LF+ M + P+ +T + V A + + +++H+L +K GF++
Sbjct: 272 FE-NHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATD 330
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
N+++ YS + E+ F M+ D +SW A+I+G+ + +A+E+ M
Sbjct: 331 VAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEV 390
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
P+ T ++ L + + ++ G + H GF +V+ +ALV+MYAK +
Sbjct: 391 NNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEK 450
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A +VF ++ K+++SW++M+ G+ + EAL + M + +KPN TFI L+AC
Sbjct: 451 AIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD-VKPNSVTFIAALAACAA 509
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
G + G ++R GI+ +++ L+ GQT A+ + + + V W
Sbjct: 510 TGSLRCGKEIHAHVLR-QGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTK-DVVSWN 567
Query: 553 CLLSG--CKTHKDLVL 566
+L+G H D+ L
Sbjct: 568 IMLAGFVAHGHGDIAL 583
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 173/372 (46%), Gaps = 17/372 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF +V N L+ MY R+ +A +F M R+ +SW+A+ISG+ + G P+ AL
Sbjct: 323 VKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKAL 382
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ LM + P+ T A++ACAS G G ++H G V+N L+ MY
Sbjct: 383 EVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMY 442
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K ++ A VF +++ ISW S+++ +C ++ L F + V + +
Sbjct: 443 AKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYF-RHMLADVKPNSVTFI 501
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ L ACA G+L+ G +IH+ V + + + +V L++LY KC + A F
Sbjct: 502 AALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTK 561
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL- 300
D+ +W+ ++ G+ G A+ F +M +G P EVTF +L + G +L
Sbjct: 562 DVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELF 621
Query: 301 HSLIIKMGFSSFTFVAN-----TVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGH 354
HS+ K ++ V N ++D S+ L E + M D W AL+ G
Sbjct: 622 HSMTEK-----YSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNG- 675
Query: 355 LASCHYGEAIEL 366
C IEL
Sbjct: 676 ---CRIHRNIEL 684
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/652 (33%), Positives = 350/652 (53%), Gaps = 23/652 (3%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL MY K + A++LFD MPERN++S+ L+ +Q G E A FR + E
Sbjct: 100 NVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N + + + A +H ++ G + N+ V + LI+ Y C L+S A+ V
Sbjct: 160 VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHV 219
Query: 134 FDASLERNSISWVSLLSSYCQ--CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
F+ + ++++ W +++S Y + C E+ F CA +C++L
Sbjct: 220 FNGIVRKDAVVWTAMVSCYSENDCPENA------------------FRCAQ---SCSLLA 258
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
IH K + + V L+++YAKC + A F I D+ S +I
Sbjct: 259 ISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMIS 318
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
YAQ + +A +LF+++ S ++P+E + S VL A ++ + G+Q+H+ IK+G S
Sbjct: 319 RYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHES 378
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
FV N ++DFY+KC ++ SLK F + + + VSWN ++ G S EA+ + +M
Sbjct: 379 DLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQ 438
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
TYS++L + +I Q HC I K F+++ VIG++L+D YAKCG +
Sbjct: 439 AAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIR 498
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
DA KVF HL ++++SWN ++ GYA HG +ALE++ M ++ ++ ND TF+ +LS C
Sbjct: 499 DALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCC 558
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
GLV G F+SM DHGI P M+H +V L G+ A +FI P P+ +VW
Sbjct: 559 STGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVW 618
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
R LLS C HK++ LGR++AEKIL +P+D + +++LSN+YA A D+ A +RK M+
Sbjct: 619 RALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNI 678
Query: 612 SLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++K G SW E++ ++H FS ++ ++ L++ GY+PD
Sbjct: 679 GVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPD 730
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 211/411 (51%), Gaps = 23/411 (5%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGL--ELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
+ C +RGDAR G+ +HG + R G L+ +N L+NMYGK G L+SA+ +FD ER
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
N +S+V+L+ ++ Q G+ +F R G +++F ++L + + +H
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
S +K + + FV GLI+ Y+ C + A VF+ I D W+A++ Y++
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSE----- 240
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-LHSLIIKMGFSSFTFVANTV 319
D F S + S RQ +H IK + V +
Sbjct: 241 --NDCPENAFRCAQSCSLLAISC-------------ARQGIHGCAIKTLNDTEPHVGGAL 285
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
LD Y+KC ++++ F+ + DV+ + +I+ + S +A EL ++ PN
Sbjct: 286 LDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNE 345
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
Y+ S++L +++ +++GKQ H +K G +S++ +G+AL+D YAKC ++ + K+F
Sbjct: 346 YSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSS 405
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
L N VSWNT++VG++Q GLG EAL ++ MQ ++ T+ VL AC
Sbjct: 406 LRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 456
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 245/489 (50%), Gaps = 29/489 (5%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N + L+ Y S ++DA+ +F+ + ++ + W+A++S +S+ PE N F
Sbjct: 192 GHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE---NAF 248
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R C L A+S CA +G IHG ++ + HV L++MY KC
Sbjct: 249 RCAQSCSLL--------AIS-CARQG-------IHGCAIKTLNDTEPHVGGALLDMYAKC 292
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A+ F+ + I ++S Y Q ++ ++FL +S V +E+S +SVL
Sbjct: 293 GDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVL 352
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC + L G QIH+ K E D FV L++ YAKC +D + ++FS+++ +
Sbjct: 353 QACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEV 412
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ ++ G++Q G EA+ +F +M ++ + ++VT+S VL A A Q+H I
Sbjct: 413 SWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSI 472
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
K F++ T + N+++D Y+KC + ++LK F + E D++SWNA+I+G+ +A+
Sbjct: 473 EKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADAL 532
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFDSNVVIGSALVDM 423
EL M N T+ +L++ + G + + G ++ + +V +
Sbjct: 533 ELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRL 592
Query: 424 YAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQH---GLGREALEIYSMMQENKIKPN 479
+ GRLNDA + + D S+ + + W +L H LGR +S + +I+P
Sbjct: 593 LGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR-----FSAEKILEIEPQ 647
Query: 480 DNTFIGVLS 488
D T +LS
Sbjct: 648 DETTYVLLS 656
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 157/341 (46%), Gaps = 29/341 (8%)
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFK--CALEFDKFVAMGLINLYAKCEKLDLA 231
+ F+CA L C G+ + G +H V + D F A L+N+Y K L A
Sbjct: 56 GVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASA 115
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG-AFA- 289
R+F + ++ ++ L+ +AQ G A LF ++ G ++ + +L A A
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
D GG +HS K+G FV + ++D YS C L+ ++ F+ + D V W A
Sbjct: 176 DAAGLAGG--VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTA 233
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCP-NLYTYSNILNISSDIPAIEWGKQ-THCCIVK 407
++ SC+ E CP N + + S + AI +Q H C +K
Sbjct: 234 MV-----SCYS------------ENDCPENAFRCAQ----SCSLLAISCARQGIHGCAIK 272
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
D+ +G AL+DMYAKCG + DAR F+ + +++ + M+ YAQ +A E+
Sbjct: 273 TLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFEL 332
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+ + + + PN+ + VL AC ++ ++ G N I+
Sbjct: 333 FLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 373
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 2/251 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G ++ N L+ Y K + ++ + K+F + + N +SW+ ++ GFSQ G+ E AL
Sbjct: 372 IKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEAL 431
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F M + TY + ACAS R +IH + +S ++ + N LI+ Y
Sbjct: 432 SVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTY 491
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A VF +ER+ ISW +++S Y G+ L++F KS V ++ +
Sbjct: 492 AKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFV 551
Query: 182 SVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-Q 239
++L C G + G+ + S+ ++ ++ L + +L+ A + +I
Sbjct: 552 ALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPS 611
Query: 240 LPDLTAWSALI 250
P W AL+
Sbjct: 612 APSAMVWRALL 622
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/640 (32%), Positives = 349/640 (54%), Gaps = 1/640 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF-RLMVCCVL 72
N +L VK +N+A++LFD+M +R+ ISW+ +ISG+ AL+ F ++ V L
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+ + A+ AC G+ +HG ++ + V + L++MY K G +
Sbjct: 65 HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VF RN +SW ++++ + G + L F V ++ +S L ACA G
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGA 184
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L G +IH K FVA L +Y KC KLD R+F ++ D+ +W+ +I
Sbjct: 185 LNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMS 244
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Q+G+ A+ F +M + + P+E TF+ V+ A + G QLH+ +I+ G
Sbjct: 245 NVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDS 304
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
VAN+++ YSKC L+ + F + D++SW+ +I+G+ EA + L M
Sbjct: 305 LSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRR 364
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EG PN + ++++L++ ++ +E GKQ H ++ G + N ++ SAL++MY+KCG + +
Sbjct: 365 EGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKE 424
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A K+FD N+VSW M+ GYA+HG +EA++++ + + ++P+ TFI VL+AC H
Sbjct: 425 ASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSH 484
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
GLV+ G+HYFNS+ + H I P DH ++ L G+ A I+S P + + VVW
Sbjct: 485 AGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWS 544
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL C+ H D+ G+ AAEKIL DP HI L+N+YA W E A+VRK+MK K
Sbjct: 545 TLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKG 604
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
+ K+ G SW + ++++ F + + +G +++V++ L+
Sbjct: 605 VVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLA 644
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/477 (32%), Positives = 253/477 (53%), Gaps = 19/477 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ + F +V + L+ MY+K ++++ +F EMP RNV+SW+A+I+G + G + AL
Sbjct: 95 VKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEAL 154
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
YF M + + YT+ A+ ACA G G+EIH + + G S V+N L MY
Sbjct: 155 AYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMY 214
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG L +F++ +R+ +SW +++ S Q G+ + +K F R++ V+ +EF+ A
Sbjct: 215 NKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFA 274
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+V+ CA LG ++ G Q+H+ V + L VA ++ +Y+KC +LDLAS VF +
Sbjct: 275 AVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRR 334
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +WS +I GYAQ G EA D M G P+E F+ VL ++ G+QLH
Sbjct: 335 DIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLH 394
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ ++ +G T V + +++ YSKC ++E+ K FDE + +++VSW A+I G+ +
Sbjct: 395 AHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQ 454
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG--------KQTHCCIVKPGFDSN 413
EAI+L K + G P+ T+ +L S ++ G K C K +
Sbjct: 455 EAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHY--- 511
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALE 466
++D+ + GRLNDA + + ++ V W+T+L HG G+ A E
Sbjct: 512 ----GCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAE 564
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 123/254 (48%), Gaps = 6/254 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G ++ N ++ MY K +++ A +F + R++ISWS +ISG++Q G E A
Sbjct: 296 VIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEA 355
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+Y M PN + + +S C + GK++H + GLE N+ V + LINM
Sbjct: 356 FDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINM 415
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A +FD + N +SW ++++ Y + G + +F K G+ +
Sbjct: 416 YSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTF 475
Query: 181 ASVLGACAVLGNLKVGMQIH---SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+VL AC+ G + +G S V + D + M I+L + +L+ A + +
Sbjct: 476 IAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCM--IDLLCRAGRLNDAESMIQS 533
Query: 238 IQLP-DLTAWSALI 250
+ D WS L+
Sbjct: 534 MPFQRDDVVWSTLL 547
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/570 (34%), Positives = 339/570 (59%), Gaps = 17/570 (2%)
Query: 79 YVGAVSACASRGDARSGKE---IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
YV + C D RS E +HG + ++G N V + L+N+Y KCG + A+ VFD
Sbjct: 70 YVPLLQQCL---DTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFD 126
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
L RN ++W +L+ + Q + H + +F +G S ++ ++VL AC+ L +LK+
Sbjct: 127 NMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKL 186
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G Q H+ + K ++FD V L +LY+KC +L+ A + FS I+ ++ +W++ + A
Sbjct: 187 GDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACAD 246
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G + + LFV+M + + P+E T + L ++ G Q++SL IK G+ S V
Sbjct: 247 NGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRV 306
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH----------LASCHYG-EAI 364
N++L Y K + E+ + F+ MD+ +V+WNA+IAGH L++CH G EA+
Sbjct: 307 RNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEAL 366
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L + G P+L+T S++L++ S + AIE G+Q H +K GF S+V++ ++L+ MY
Sbjct: 367 KLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMY 426
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+KCG + A K F +S++ +++W +M+ G++QHG+ ++AL I+ M ++PN TF+
Sbjct: 427 SKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFV 486
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVLSAC H G+V + +YF M + + I P MDH +V +F G+ +A FIK
Sbjct: 487 GVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNY 546
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP++ +W ++GCK+H +L LG YAAE++LS P+D +++L N+Y A +++ ++V
Sbjct: 547 EPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRV 606
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTS 634
RK+M+E+ + K SW +++K++ F T+
Sbjct: 607 RKMMEEEKVGKLKDWSWISIKDKVYSFKTN 636
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/508 (28%), Positives = 250/508 (49%), Gaps = 28/508 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G H N + L+ +Y K + DA+++FD M RNV++W+ L+ GF Q P+ A
Sbjct: 93 VMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQPKHA 152
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F+ M+ P+ YT + AC+S + G + H + + ++ ++ V + L ++
Sbjct: 153 IHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSL 212
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L A F E+N ISW S +S+ G V GL++F+ + +EF+
Sbjct: 213 YSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTL 272
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S L C + +L++G Q++SL K E + V L+ LY K + A R+F+ +
Sbjct: 273 TSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDD 332
Query: 241 PDLTAWSALIGGYAQLGK-------AC----EAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
+ W+A+I G+AQ+ + AC EA+ LF K+ SG+ P T S VL +
Sbjct: 333 ASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCS 392
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ G Q+H+ IK GF S V+ +++ YSKC +E + K F EM +++W +
Sbjct: 393 RMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTS 452
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN-------ISSDIPAIEWGKQTH 402
+I G +A+ + +DM G PN T+ +L+ +S + E ++ +
Sbjct: 453 MITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKY 512
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLG 461
+KP D +VDM+ + GRL A ++ + W+ + G H G
Sbjct: 513 --KIKPAMDHY----ECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSH--G 564
Query: 462 REALEIYSMMQENKIKPND-NTFIGVLS 488
L Y+ Q +KP D T++ +L+
Sbjct: 565 NLELGFYAAEQLLSLKPKDPETYVLLLN 592
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/651 (32%), Positives = 354/651 (54%), Gaps = 9/651 (1%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY K + DA +F + N +SW+ +++ F++ G AL Y+R MV L P+
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
+V A+ C+S D + G+ +H + + L E + + LI MY +C L A+ FD
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRK-SGVAISEFSCASVLGACAVLGNLK 194
++ ++W +L++ Y + G+H LKI+ ++S+ G+ + +S L AC V+G++
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G +I + D V LIN+Y+KC L+ A +VF ++ D+ AW+ +I GYA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
+ G A +A++LF +M + P+ VTF +L A ++++ GR +H + + G+ S
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300
Query: 315 VANTVLDFYSKCEL-LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ N +L+ Y+KC LEE+ + F+ M DV++WN LI ++ +A+++ K M E
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN T SN+L+ + + A GK H I ++VV+ ++L++MY +CG L+D
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
VF + K+LVSW+T++ YAQHG R LE + + + + +D T + LSAC H
Sbjct: 421 VGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHG 480
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G+++EG F SM+ DHG++P H +V L + G+ A I P P+ V W
Sbjct: 481 GMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTS 540
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI-MLSNVYAEANMWDETAKVRKIMKEKS 612
LLSGCK H D A+K+ + ED + + +LSNVYAEA WD+ VRK ++
Sbjct: 541 LLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD---VRKTRNRRA 597
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+K+ GCS+ E+ + +H F + + + + +LS + D GYVPD
Sbjct: 598 ARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPD 648
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 241/471 (51%), Gaps = 6/471 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
++I L+ MY + + A+K FDEM ++ +++W+ALI+G+S+ G AL ++ MV
Sbjct: 93 DIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMV 152
Query: 69 CCV---LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
++P+ T+ A+ AC GD G+EI R SG +S V N LINMY KCG
Sbjct: 153 SKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCG 212
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L SA+ VFD R+ I+W +++S Y + G L++F + + + +L
Sbjct: 213 SLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLT 272
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC-EKLDLASRVFSNIQLPDLT 244
AC L +L+ G IH V + E D + L+N+Y KC L+ A +VF ++ D+
Sbjct: 273 ACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVI 332
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+ LI Y Q G+A +A+D+F +M + P+E+T S VL A A + G+ +H+LI
Sbjct: 333 TWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALI 392
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+ + N++++ Y++C L++++ F + + +VSW+ LIA + H +
Sbjct: 393 ASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGL 452
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDM 423
E ++L EG + T + L+ S ++ G QT +V G + +VD+
Sbjct: 453 EHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDL 512
Query: 424 YAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
++ GRL A + D + V+W ++L G H + A + + E
Sbjct: 513 LSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 183/366 (50%), Gaps = 25/366 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG+ + I N L+ MY K + A+K+FD + R+VI+W+ +ISG+++ G AL
Sbjct: 190 VASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQAL 249
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M +PN T++G ++AC + D G+ IH ++ G E + + N L+NMY
Sbjct: 250 ELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMY 309
Query: 122 GKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
KC L A+ VF+ R+ I+W L+ +Y Q G+ L IF + VA +E +
Sbjct: 310 TKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITL 369
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++VL ACAVLG + G +H+L+ + D + L+N+Y +C LD VF+ I+
Sbjct: 370 SNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRD 429
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
L +WS LI YAQ G + ++ F ++ GL +VT L A +
Sbjct: 430 KSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS----------- 478
Query: 301 HSLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSW 347
H ++K G +F + ++D S+ LE + +M D V+W
Sbjct: 479 HGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAW 538
Query: 348 NALIAG 353
+L++G
Sbjct: 539 TSLLSG 544
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/624 (33%), Positives = 345/624 (55%), Gaps = 8/624 (1%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY K + A++LFD MPERN+IS+++LISG++Q+G E A+ F L+ + +T
Sbjct: 92 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFT 151
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y GA+ C R D GK +HG + +GL + N LI+MY KCG L A +FD
Sbjct: 152 YAGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCN 211
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV---LGNLKV 195
ER+ +SW SL+S Y + G L + ++G+ ++ ++ SVL AC + G ++
Sbjct: 212 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEK 271
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
GM IH K +EFD V L+++YAK L A ++FS + ++ ++A+I G+ Q
Sbjct: 272 GMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQ 331
Query: 256 LGK-----ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
+ + EA LF++M GL PS TFS VL A + K GRQ+H+LI K F
Sbjct: 332 MDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 391
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S F+ + +++ Y+ E+ ++ F + D+ SW ++I H+ + A +L + +
Sbjct: 392 SDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQL 451
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
P YT S +++ +D A+ G+Q +K G D+ + ++ + MYAK G +
Sbjct: 452 FSSPIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNM 511
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
A KVF + + ++ +++ M+ AQHG +AL I+ M+ IKPN F+GVL AC
Sbjct: 512 PLANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIAC 571
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
H GLV G +YF +M +GI+P H + L G+ A I SS + + V+
Sbjct: 572 CHGGLVTHGVNYFQTMKNSYGINPNEKHFTCLADLLGRTGRLSDAENLILSSGFQDHPVM 631
Query: 551 WRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
WR LLS C+ +KD V+G+ AE+++ +PE + ++++L N+Y ++ + +VR++M++
Sbjct: 632 WRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRD 691
Query: 611 KSLKKDTGCSWTELQNKMHYFSTS 634
+ +KK+ SW L N+ H F+ +
Sbjct: 692 RGVKKEPALSWIVLGNQTHSFAVA 715
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 149/496 (30%), Positives = 240/496 (48%), Gaps = 20/496 (4%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y A G GK HG M +S L ++ N L+NMY KC L A+ +FD
Sbjct: 51 YKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 110
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
ERN IS+ SL+S Y Q G + +++FL +R + + +F+ A LG C +L G
Sbjct: 111 ERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFGKL 170
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H LV L F+ LI++Y+KC KLD A +F D +W++LI GY ++G
Sbjct: 171 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGA 230
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA-DVKETI--GGRQLHSLIIKMGFSSFTFV 315
A E ++L KM +GL + VL A ++ E + G +H K+G V
Sbjct: 231 AEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVV 290
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL-----ASCHYGEAIELLKDM 370
+LD Y+K L+E++K F M +VV++NA+I+G L EA +L +M
Sbjct: 291 RTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEM 350
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
G P+ T+S +L S +E+G+Q H I K F S+ IGSAL+++YA G
Sbjct: 351 QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGST 410
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
D + F S +++ SW +++ + Q+ A +++ + + I+P + T ++SAC
Sbjct: 411 EDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSAC 470
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASV----VHLFACRGQTRRAYE-FIKSSPIE 545
+ G I+ + I +D SV + ++A G A + FI+
Sbjct: 471 ADFAALSSG-----EQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQ--N 523
Query: 546 PNKVVWRCLLSGCKTH 561
P+ + ++S H
Sbjct: 524 PDVATYSAMISSLAQH 539
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/687 (32%), Positives = 369/687 (53%), Gaps = 30/687 (4%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V N L+ MY K + DA K+FD + ER+ +SW+++IS + EVA+ F
Sbjct: 42 GSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAF 101
Query: 65 RLMVCCVLEPNYYTYVGAVSACAS---RGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
RLM+ EP+ +T V AC++ R GK+IHG +R G + +N L+ MY
Sbjct: 102 RLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMY 160
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G L A+ + +R+ ++W S++SS+ Q + L L GV + A
Sbjct: 161 AKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFA 220
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKC--ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL AC+ L L+ G +IH+ + +E + FV L+++Y C +++ VF ++
Sbjct: 221 SVLPACSHLDLLRTGKEIHAYALRTDDVIE-NSFVGSALVDMYCNCGQVESGRLVFDSVL 279
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ W+A+I GYAQ +A+ LF++M ++GL + T S ++ A+ +
Sbjct: 280 DRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKE 339
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H +IK G + ++ N ++D YS+ ++ S + FD M++ D+VSWN +I ++
Sbjct: 340 GIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICG 399
Query: 359 HYGEAIELLKDM-------LFEGHC---------PNLYTYSNILNISSDIPAIEWGKQTH 402
+A+ LL +M ++G PN T +L + + A+ GK+ H
Sbjct: 400 RSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIH 459
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
++ S V +GSALVDMYAKCG LN AR+VFD + +N+++WN +++ Y HG G+
Sbjct: 460 AYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGK 519
Query: 463 EALEIYSMM-----QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
E+LE++ M + ++KP + TFI + ++C H G+V+EG F+ M +HGI P D
Sbjct: 520 ESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPD 579
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILS 576
H A +V L G+ AY + + P +KV W LL C+ + ++ +G AAE +L
Sbjct: 580 HYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQ 639
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRF 636
P+ S +++LSN+Y+ A +WD+ +R+ MK +KK+ GCSW E +++H F
Sbjct: 640 LQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDL 699
Query: 637 AQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ Q LH+ + LS L GYVPD
Sbjct: 700 SHPQSEKLHDFLETLSERLKKEGYVPD 726
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 248/523 (47%), Gaps = 36/523 (6%)
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS--NCLINMYGKC 124
M+ P+ + + + A A + GK+IH +++ G S V+ N L+NMYGKC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L A VFD ER+ +SW S++S+ C+ E +K F L G S F+ S+
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 185 GACAVL---GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
AC+ L L +G QIH F+ + F L+ +YAK +LD A + +
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
DL W+++I ++Q + EA+ M G+ P VTF+ VL A + + G+++H
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239
Query: 302 SLIIKM-GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
+ ++ +FV + ++D Y C +E FD + + + WNA+IAG+ S H
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHD 299
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA------IEWGKQTHCCIVKPGFDSNV 414
+A+ MLF YSN +SS +PA I + H ++K G ++N
Sbjct: 300 EKAL-----MLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNR 354
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ-- 472
+ +AL+DMY++ G + ++++FD + +++VSWNT++ Y G +AL + MQ
Sbjct: 355 YLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRI 414
Query: 473 ENK--------------IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
E K KPN T + VL C + + +G IR+ ++ ++
Sbjct: 415 EEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNL-LASQVTV 473
Query: 519 IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+++V ++A G A PI N + W ++ H
Sbjct: 474 GSALVDMYAKCGCLNLARRVFDQMPIR-NVITWNVIIMAYGMH 515
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 24/276 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G N N L+ MY + I ++++FD M +R+++SW+ +I+ + G A
Sbjct: 345 VIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDA 404
Query: 61 LNYFRLMV----------------CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR 104
L M +PN T + + CAS GKEIH R
Sbjct: 405 LLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIR 464
Query: 105 SGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKI 164
+ L V + L++MY KCG L+ A+ VFD RN I+W ++ +Y G+ L++
Sbjct: 465 NLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLEL 524
Query: 165 FLLSRKSG-----VAISEFSCASVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGL 218
F G V +E + ++ +C+ G + G+ + H + + +E +
Sbjct: 525 FEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACI 584
Query: 219 INLYAKCEKLDLASRVFSNIQ--LPDLTAWSALIGG 252
++L + K++ A + + + + AWS+L+G
Sbjct: 585 VDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGA 620
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/651 (32%), Positives = 355/651 (54%), Gaps = 9/651 (1%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY K + DA +F + N +SW+ +++ F++ G AL Y+R MV L P+
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
+V A+ C+S D + G+ +H + + L E + + LI MY +C L A+ FD
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRK-SGVAISEFSCASVLGACAVLGNLK 194
++ ++W +L++ Y + G+H LKI+ ++S+ G+ + +S L AC+V+G++
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G +I + D V LIN+Y+KC L+ A +VF ++ D+ AW+ +I GYA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
+ G A +A++LF +M + P+ VTF +L A ++++ GR +H + + G+ S
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300
Query: 315 VANTVLDFYSKCEL-LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ N +L+ Y+KC LEE+ + F+ + DV++WN LI ++ +A+++ K M E
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN T SN+L+ + + A GK H I ++VV+ ++L++MY +CG L+D
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
VF + K+LVSW+T++ YAQHG R LE + + + + +D T + LSAC H
Sbjct: 421 VGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHG 480
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G+++EG F SM+ DHG++P H +V L + G+ A I P P+ V W
Sbjct: 481 GMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTS 540
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI-MLSNVYAEANMWDETAKVRKIMKEKS 612
LLSGCK H D A+K+ + ED + + +LSNVYAEA WD+ VRK ++
Sbjct: 541 LLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD---VRKTRNRRA 597
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+K+ GCS+ E+ + +H F + + + + +LS + D GYVPD
Sbjct: 598 ARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPD 648
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 242/471 (51%), Gaps = 6/471 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
++I L+ MY + + A+K FDEM ++ +++W+ALI+G+S+ G AL ++ MV
Sbjct: 93 DIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMV 152
Query: 69 CCV---LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
++P+ T+ A+ AC+ GD G+EI R SG +S V N LINMY KCG
Sbjct: 153 SKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCG 212
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L SA+ VFD R+ I+W +++S Y + G L++F + + + +L
Sbjct: 213 SLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLT 272
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC-EKLDLASRVFSNIQLPDLT 244
AC L +L+ G IH V + E D + L+N+Y KC L+ A +VF ++ D+
Sbjct: 273 ACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVI 332
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+ LI Y Q G+A +A+D+F +M + P+E+T S VL A A + G+ +H+LI
Sbjct: 333 TWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALI 392
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+ + N++++ Y++C L++++ F + + +VSW+ LIA + H +
Sbjct: 393 ASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGL 452
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDM 423
E ++L EG + T + L+ S ++ G Q+ +V G + +VD+
Sbjct: 453 EHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDL 512
Query: 424 YAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
++ GRL A + D + V+W ++L G H + A + + E
Sbjct: 513 LSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 183/366 (50%), Gaps = 25/366 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG+ + I N L+ MY K + A+K+FD + R+VI+W+ +ISG+++ G AL
Sbjct: 190 VASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQAL 249
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M +PN T++G ++AC + D G+ IH ++ G E + + N L+NMY
Sbjct: 250 ELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMY 309
Query: 122 GKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
KC L A+ VF+ R+ I+W L+ +Y Q G+ L IF + VA +E +
Sbjct: 310 TKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITL 369
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++VL ACAVLG + G +H+L+ + D + L+N+Y +C LD VF+ I+
Sbjct: 370 SNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRD 429
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
L +WS LI YAQ G + ++ F ++ GL +VT L A +
Sbjct: 430 KSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS----------- 478
Query: 301 HSLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSW 347
H ++K G SF + ++D S+ LE + +M D V+W
Sbjct: 479 HGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAW 538
Query: 348 NALIAG 353
+L++G
Sbjct: 539 TSLLSG 544
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/677 (32%), Positives = 379/677 (55%), Gaps = 12/677 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG ++ + L+ + + ++A+ +F + ++N ++ + LI G + E A
Sbjct: 301 VLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEA 360
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACA----SRGDARSGKEIHGRMYRSGL-ELNSHVSN 115
+ F + ++ N TYV +SA A S R G+ +HG M R+GL +L VSN
Sbjct: 361 VKIF-VGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSN 419
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
L+NMY KCG + SA +F + ISW +++S+ Q G + + L R+S ++
Sbjct: 420 GLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISP 479
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
S F+ S L +CA L L G Q+H K L+ D V+ L+ +Y +C + +VF
Sbjct: 480 SNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVF 539
Query: 236 SNIQLPDLTAWSALIGGYAQLGKA-CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
+++ D +W+ ++G A E + +F M GL+P++VTF +L A + +
Sbjct: 540 NSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVL 599
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAG 353
G+Q+H+ ++K G V N ++ Y+K + F M D D +SWN++I+G
Sbjct: 600 ELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISG 659
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
++ + + EA++ + M+ G + T+S ILN + + A+E G + H ++ +S+
Sbjct: 660 YIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESD 719
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
VV+ SALVDMY+KCGR++ A K+F+ ++ +N SWN+M+ GYA+HGLGR+A+EI+ M
Sbjct: 720 VVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLR 779
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
++ P+ TF+ VLSAC H GLVE G YF M+ DHGI P+++H + V+ L G+
Sbjct: 780 SRESPDHVTFVSVLSACSHAGLVERGLEYFE-MMPDHGILPQIEHYSCVIDLLGRAGKID 838
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKD---LVLGRYAAEKILSTDPEDTSAHIMLSN 590
+ E+I+ PIEPN ++WR +L C+ KD + LGR A+ +L +P++ +++ SN
Sbjct: 839 KIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASN 898
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQ 650
+A MW++TAK R M++ + KK+ G SW L + +H F + +++E +N
Sbjct: 899 FHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNF 958
Query: 651 LSVHLFDGGYVPDPIYS 667
L ++ + GYVP Y+
Sbjct: 959 LIQNIRNAGYVPLTEYA 975
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 153/575 (26%), Positives = 280/575 (48%), Gaps = 20/575 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G + ++ NHL+ Y K +R+ A ++FDEMPERN +SW+ L+SG+ G+ E A
Sbjct: 87 LIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEA 146
Query: 61 LNYFRLMVCCV---LEPNYYTYVGAVSACASRGDARSG--KEIHGRMYRSGLELNSHVSN 115
FR M+ V P +T+ + AC G R G ++HG + ++ N+ V N
Sbjct: 147 FRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCN 206
Query: 116 CLINMYGKC--GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
LI+MYG C G AQ VFD + R+ I+W +L+S Y + G+ +F ++
Sbjct: 207 ALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDS 266
Query: 174 AISEFSCASVLGACAV-----LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
I G+ G+ V Q+ V K D +V L++ +A+
Sbjct: 267 RIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLT 326
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
D A +F +++ + + LI G + + EA+ +FV ++ + ++ T+ +L A
Sbjct: 327 DEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNAD-TYVVLLSAL 385
Query: 289 ADV---KETIG-GRQLHSLIIKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHD 343
A+ +E + GR +H +++ G + V+N +++ Y+KC +E + K F M+ D
Sbjct: 386 AEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATD 445
Query: 344 VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHC 403
+SWN +I+ + + EA+ M P+ + + L+ + + + G+Q HC
Sbjct: 446 RISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHC 505
Query: 404 CIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML-VGYAQHGLGR 462
VK G D + + + LV MY +CG ++D KVF+ ++ + VSWNTM+ V +
Sbjct: 506 DAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPIS 565
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
E +++++ M + PN TFI +L+A + ++E G ++++ HG+ ++
Sbjct: 566 EIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMK-HGVMEDNVVDNAL 624
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ +A G + + + W ++SG
Sbjct: 625 ISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISG 659
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 207/426 (48%), Gaps = 16/426 (3%)
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
GDA S + +H + + GL + + N L+N Y K L++A VFD ERN++SW L+
Sbjct: 75 GDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLV 134
Query: 150 SSYCQCGEHVHGLKIF---LLSRKSGVAISEFSCASVLGACAVLGNLKVG--MQIHSLVF 204
S Y G ++F L ++G + F+ ++L AC G ++G +Q+H LV
Sbjct: 135 SGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVS 194
Query: 205 KCALEFDKFVAMGLINLYAKCE--KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEA 262
K + V LI++Y C LA RVF + DL W+AL+ YA+ G
Sbjct: 195 KTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVAST 254
Query: 263 IDLFVKMFSSG----LMPSEVTF-SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
LF M L P+E TF S + A + Q+ ++K G SS +V +
Sbjct: 255 FTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGS 314
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL---KDMLFEG 374
++ +++ L +E+ F + + + V+ N LI G + EA+++ ++ +
Sbjct: 315 ALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVN 374
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF-DSNVVIGSALVDMYAKCGRLNDA 433
+ S + S + G+ H +++ G D + + + LV+MYAKCG + A
Sbjct: 375 ADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESA 434
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
K+F + + + +SWNT++ Q+G EA+ YS+M+++ I P++ I LS+C +
Sbjct: 435 SKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGL 494
Query: 494 GLVEEG 499
L+ G
Sbjct: 495 KLLTAG 500
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/663 (31%), Positives = 347/663 (52%), Gaps = 71/663 (10%)
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
C L+ + + + + +C + IH R+ ++ + N L++ YGKCG
Sbjct: 15 CFLDSSPFAKL--LDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFED 72
Query: 130 AQFVFDASLERNSIS-------------------------------WVSLLSSYCQCGEH 158
A+ VFD +RN+ S W +++S + Q
Sbjct: 73 ARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRF 132
Query: 159 VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
L+ F+ ++E+S S L ACA L +L +G+QIH+L+ K D ++ L
Sbjct: 133 EEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSAL 192
Query: 219 INLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE 278
+++Y+KC + A R F + + ++ +W++LI Y Q G A +A+++FV M +G+ P E
Sbjct: 193 VDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDE 252
Query: 279 VTFSYVLGAFADVKETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFD 337
+T + V+ A A G Q+H+ ++K + + + N ++D Y+KC + E+ FD
Sbjct: 253 ITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFD 312
Query: 338 EMD-------------------------------EHDVVSWNALIAGHLASCHYGEAIEL 366
M E +VVSWNALIAG+ + EA+ L
Sbjct: 313 RMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRL 372
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF------DSNVVIGSAL 420
+ E P YT+ N+LN +++ ++ G+Q H I+K GF +S++ +G++L
Sbjct: 373 FLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSL 432
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMY KCG + D VF+ + +++VSWN M+VGYAQ+G G ALEI+ M + KP+
Sbjct: 433 IDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDH 492
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
T IGVLSAC H GLVEEG YF+SM + G++P DH +V L G A + I+
Sbjct: 493 VTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQ 552
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+ P++P+ VVW LL+ CK H ++ LG+Y AEK++ DP ++ +++LSN+YAE W +
Sbjct: 553 TMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKD 612
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
+VRK M+++ + K GCSW E+Q+++H F D+H V+ L+ + GY
Sbjct: 613 VVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGY 672
Query: 661 VPD 663
VP+
Sbjct: 673 VPE 675
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/491 (31%), Positives = 253/491 (51%), Gaps = 40/491 (8%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N +YN +L + KF ++++A +F MPE + SW+A++SGF+Q E AL +F M
Sbjct: 84 NTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMH 143
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
N Y++ A+SACA D G +IH + +S L+ ++ + L++MY KCG+++
Sbjct: 144 SEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVA 203
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
AQ FD RN +SW SL++ Y Q G L++F++ +GV E + ASV+ ACA
Sbjct: 204 CAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACA 263
Query: 189 VLGNLKVGMQIHSLVFKC-ALEFDKFVAMGLINLYAKCEKLDLASRVF------------ 235
++ G+QIH+ V K D + L+++YAKC +++ A VF
Sbjct: 264 SWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSET 323
Query: 236 -------------------SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
SN+ ++ +W+ALI GY Q G+ EA+ LF+ + + P
Sbjct: 324 SMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWP 383
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF------SSFTFVANTVLDFYSKCELLE 330
+ TF +L A A++ + GRQ H+ I+K GF S FV N+++D Y KC ++E
Sbjct: 384 THYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVE 443
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
+ F+ M E DVVSWNA+I G+ + + A+E+ + ML G P+ T +L+ S
Sbjct: 444 DGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACS 503
Query: 391 DIPAIEWGKQT-HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSW 448
+E G++ H + G + +VD+ + G L++A + + + + V W
Sbjct: 504 HAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVW 563
Query: 449 NTMLVGYAQHG 459
++L HG
Sbjct: 564 GSLLAACKVHG 574
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG ++ N L+ MY+K + D +F+ M ER+V+SW+A+I G++Q G AL
Sbjct: 420 SGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEI 479
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE-IHGRMYRSGLELNSHVSNCLINMYG 122
FR M+ +P++ T +G +SAC+ G G+ H GL C++++ G
Sbjct: 480 FRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLG 539
Query: 123 KCGLLSSAQ-FVFDASLERNSISWVSLLSSYCQCGEHVHG 161
+ G L A + ++ +++ W SLL++ C+ VHG
Sbjct: 540 RAGCLDEANDLIQTMPMQPDNVVWGSLLAA-CK----VHG 574
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/666 (31%), Positives = 353/666 (53%), Gaps = 4/666 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG-MPEVA 60
+ +G + N L+ MY K + A K+F+ M RN++SW++++ S+ G E
Sbjct: 222 LKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECC 281
Query: 61 LNYFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
+ RL++ L P+ T V + ACA+ G+ R G +HG ++ G+ V+N L+
Sbjct: 282 GVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLV 341
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISE 177
+MY KCG L A+ +FD + +N +SW +++ Y + G+ ++ + R+ V ++E
Sbjct: 342 DMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNE 401
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ +VL AC+ L +IH F+ D+ VA + YAKC LD A RVF
Sbjct: 402 VTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCG 461
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
++ +++W+ALIG +AQ G +++DLF+ M SG+ P T +L A A +K G
Sbjct: 462 MEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCG 521
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+++H +++ G F+ +++ Y +C + FD+M+ +V WN +I G +
Sbjct: 522 KEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQN 581
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA++ + ML G P + +L S + A+ GK+ H +K + +
Sbjct: 582 ELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVT 641
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
AL+DMYAKCG + ++ +FD ++ K+ WN ++ GY HG G +A+E++ +MQ +
Sbjct: 642 CALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGR 701
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ TF+GVL AC H GLV EG Y M +G+ P+++H A VV + GQ A +
Sbjct: 702 PDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALK 761
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
+ P EP+ +W LLS C+ + DL +G ++K+L +P +++LSN+YA
Sbjct: 762 LVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGK 821
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
WDE KVR+ MKE L KD GCSW E+ ++ F S + + + + +L +
Sbjct: 822 WDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISK 881
Query: 658 GGYVPD 663
GY PD
Sbjct: 882 IGYKPD 887
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 153/561 (27%), Positives = 285/561 (50%), Gaps = 13/561 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF-RLM 67
+V+ ++ MY +D++ +FD E+++ ++AL+SG+S+ + A++ F L+
Sbjct: 127 DVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELL 186
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
L P+ +T ACA D G+ +H ++G ++ V N LI MYGKCG +
Sbjct: 187 SATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFV 246
Query: 128 SSAQFVFDASLERNSISWVSLL---SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
SA VF+ RN +SW S++ S GE K L+S + G+ + +V+
Sbjct: 247 ESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVI 306
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA +G +++GM +H L FK + + V L+++Y+KC L A +F ++
Sbjct: 307 PACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVV 366
Query: 245 AWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+ +I GY++ G +L +M + +EVT VL A + + + +++H
Sbjct: 367 SWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGY 426
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+ GF VAN + Y+KC L+ + + F M+ V SWNALI H + G++
Sbjct: 427 AFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKS 486
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
++L M+ G P+ +T ++L + + + GK+ H +++ G + + IG +L+ +
Sbjct: 487 LDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSL 546
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y +C + + +FD + +K+LV WN M+ G++Q+ L EAL+ + M IKP +
Sbjct: 547 YIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAV 606
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA---CRGQTRRAYEFIK 540
GVL AC + + G + ++ H +S +++ ++A C Q++ ++ +
Sbjct: 607 TGVLGACSQVSALRLGKEVHSFALKAH-LSEDAFVTCALIDMYAKCGCMEQSQNIFDRVN 665
Query: 541 SSPIEPNKVVWRCLLSGCKTH 561
E ++ VW +++G H
Sbjct: 666 ----EKDEAVWNVIIAGYGIH 682
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 178/347 (51%), Gaps = 13/347 (3%)
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKC-ALEFDKFVAMGLINLYAKCEKLDLASR 233
IS+ + +L AC N+ VG ++H+LV L D ++ +I +Y+ C +
Sbjct: 90 ISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRG 149
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVK 292
VF + DL ++AL+ GY++ +AI LF+++ S + L P T V A A V
Sbjct: 150 VFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVA 209
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
+ G +H+L +K G S FV N ++ Y KC +E ++K F+ M ++VSWN+++
Sbjct: 210 DVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMY 269
Query: 353 GHLASCHYGEAIELLKDMLF---EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+ +GE + K +L EG P++ T ++ + + + G H K G
Sbjct: 270 ACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLG 329
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
V + ++LVDMY+KCG L +AR +FD KN+VSWNT++ GY++ G R E+
Sbjct: 330 ITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQ 389
Query: 470 MMQ-ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
MQ E K++ N+ T + VL AC G H S+ HG + R
Sbjct: 390 EMQREEKVRVNEVTVLNVLPAC-------SGEHQLLSLKEIHGYAFR 429
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 132/258 (51%), Gaps = 14/258 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ +G + L+ +Y++ S + + +FD+M ++++ W+ +I+GFSQ +P A
Sbjct: 528 MLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEA 587
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR M+ ++P G + AC+ R GKE+H ++ L ++ V+ LI+M
Sbjct: 588 LDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDM 647
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLK---IFLLSRKSGVAISE 177
Y KCG + +Q +FD E++ W +++ Y G H HGLK +F L + G
Sbjct: 648 YAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGY---GIHGHGLKAIELFELMQNKGGRPDS 704
Query: 178 FSCASVLGACAVLGNLKVGM----QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
F+ VL AC G + G+ Q+ +L + + + + ++++ + +L A +
Sbjct: 705 FTFLGVLIACNHAGLVTEGLKYLGQMQNL-YGVKPKLEHYAC--VVDMLGRAGQLTEALK 761
Query: 234 VFSNI-QLPDLTAWSALI 250
+ + + PD WS+L+
Sbjct: 762 LVNEMPDEPDSGIWSSLL 779
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/674 (32%), Positives = 378/674 (56%), Gaps = 11/674 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SGF ++ + L+ + +F +DA+ +F++M RNV+S + L+ G + E A
Sbjct: 784 SGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKV 843
Query: 64 FRLMVCCVLEPNYYTYVGAVSACAS----RGDARSGKEIHGRMYRSGLELNS-HVSNCLI 118
F M V N +YV +SA + R G+E+H + R+GL N + N L+
Sbjct: 844 FHEMKDLV-GINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLV 902
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
NMY K G ++ A VF+ +E++S+SW SL+S Q + FL R++G S F
Sbjct: 903 NMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNF 962
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S L +CA LG + +G QIH K L+ D V+ L+ LYA+ +VFS +
Sbjct: 963 TLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLM 1022
Query: 239 QLPDLTAWSALIGGYAQL-GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
D +W+++IG + +A+ F++M G S VTF +L A + +
Sbjct: 1023 PEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVS 1082
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSWNALIAGHLA 356
Q+H+L++K S T + N +L Y KC + E K F M E D VSWN++I+G++
Sbjct: 1083 HQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIH 1142
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ +A++L+ M+ +G + +T++ +L+ + + +E G + H C ++ +S+VV+
Sbjct: 1143 NELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVV 1202
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
GSALVDMY+KCGR++ A + F+ + +N+ SWN+M+ GYA+HG G +AL++++ M +
Sbjct: 1203 GSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQ 1262
Query: 477 KPND-NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
P+ +GVLSAC H+G VEEG+ +F SM + +SPR++H + +V L G+
Sbjct: 1263 PPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEV 1322
Query: 536 YEFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
+FI S P++PN ++WR +L C ++ LGR AAE +L +P++ +++L+N+YA
Sbjct: 1323 GDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYA 1382
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W++ AK R MKE ++KK+ GCSW +++ +H F + +++ + +L+
Sbjct: 1383 SGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNR 1442
Query: 654 HLFDGGYVPDPIYS 667
+ D GY+P Y+
Sbjct: 1443 KMRDAGYIPQTKYA 1456
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 165/575 (28%), Positives = 291/575 (50%), Gaps = 25/575 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF N+ N L+ +YV+ + AQKLFDEM RN+++W+ LISG++Q G P+ A
Sbjct: 571 IKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEAC 630
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDA--RSGKEIHGRMYRSGLELNSHVSNCLIN 119
FR MV PN+Y + A+ AC G + + G +IHG + ++ + V N LI+
Sbjct: 631 ARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLIS 690
Query: 120 MYGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS-- 176
MYG C + A+ VFD RNSISW S++S Y + G+ V +F +K G+ S
Sbjct: 691 MYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFK 750
Query: 177 --EFSCASVL-GACAVLG-NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
E++ S++ AC+ + L V Q+ + V K D +V L++ +A+ D A
Sbjct: 751 PNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAK 810
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV- 291
+F + + ++ + + L+ G + + A +F +M + S+ ++ +L AF++
Sbjct: 811 NIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD-SYVVLLSAFSEFS 869
Query: 292 ---KETIGGRQLHSLIIKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
+ GR++H+ +I+ G + + N +++ Y+K + ++ F+ M E D VSW
Sbjct: 870 VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSW 929
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
N+LI+G + +A E M G P+ +T + L+ + + I G+Q HC +K
Sbjct: 930 NSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLK 989
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG-REALE 466
G D++V + +AL+ +YA+ G + KVF + + VSWN+++ + +A++
Sbjct: 990 LGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVK 1049
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
+ M + TFI +LSA + L E H ++++ + +S D A L
Sbjct: 1050 YFLEMMRGGWGLSRVTFINILSAVSSLSLHEVS-HQIHALVLKYCLS---DDTAIGNALL 1105
Query: 527 ACRGQTRRAYE----FIKSSPIEPNKVVWRCLLSG 557
+C G+ E F + S ++V W ++SG
Sbjct: 1106 SCYGKCGEMNECEKIFARMSETR-DEVSWNSMISG 1139
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 234/481 (48%), Gaps = 23/481 (4%)
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
+ +E+H + + G N +SN LIN+Y + G L SAQ +FD RN ++W L+S
Sbjct: 560 SEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 619
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG--NLKVGMQIHSLVFKCALE 209
Y Q G+ F ++G + ++ S L AC G K+G+QIH L+ K
Sbjct: 620 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 679
Query: 210 FDKFVAMGLINLYAKC-EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
D V LI++Y C + + A VF I + + +W+++I Y++ G A DLF
Sbjct: 680 SDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSS 739
Query: 269 MFSSGL----MPSEVTF-SYVLGAFADVKETIGG-RQLHSLIIKMGFSSFTFVANTVLDF 322
M GL P+E TF S + A + V + Q+ + + K GF +V + ++
Sbjct: 740 MQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSG 799
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
+++ L +++ F++M +VVS N L+ G L GEA + + + N +Y
Sbjct: 800 FARFGLTDDAKNIFEQMGVRNVVSMNGLMVG-LVKQKQGEAAAKVFHEMKDLVGINSDSY 858
Query: 383 SNILNISSDIPAIEW----GKQTHCCIVKPGFDSN-VVIGSALVDMYAKCGRLNDARKVF 437
+L+ S+ +E G++ H +++ G + N V IG+ LV+MYAK G + DA VF
Sbjct: 859 VVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVF 918
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ + K+ VSWN+++ G Q+ +A E + M+ P++ T I LS+C +
Sbjct: 919 ELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASL---- 974
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVH-LFACRGQTRRAYEFIKSSPIEP--NKVVWRCL 554
GW I G+ +D SV + L A +T E +K + P ++V W +
Sbjct: 975 -GWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSV 1033
Query: 555 L 555
+
Sbjct: 1034 I 1034
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 118/226 (52%), Gaps = 7/226 (3%)
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
++ L S TF ++ + + R+LH IK GF F++NT+++ Y + L
Sbjct: 537 NTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLG 596
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI-- 388
+ K FDEM ++V+W LI+G+ + EA +DM+ G PN Y + + L
Sbjct: 597 SAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQ 656
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC-GRLNDARKVFDHLSSKNLVS 447
S + G Q H I K + S+VV+ + L+ MY C NDAR VFD + +N +S
Sbjct: 657 ESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSIS 716
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKI----KPNDNTFIGVLSA 489
WN+++ Y++ G A +++S MQ+ + KPN+ TF +++A
Sbjct: 717 WNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITA 762
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%)
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T+ +++N E ++ H +K GF N+ + + L+++Y + G L A+K+FD +
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
S++NLV+W ++ GY Q+G EA + M PN F L AC G
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/653 (33%), Positives = 358/653 (54%), Gaps = 5/653 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP--EVALNYFRLMVCCV 71
N+L+ Y K ++ A+ +F+ + +NV+S++ LI G S G L FR M+
Sbjct: 47 NNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANN 106
Query: 72 LEPNYYTYVGAVSACA-SRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
+ P+ +T+ G +A A + G +++H ++ + V + L+N Y K G + A
Sbjct: 107 ILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEA 166
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
+ +FD ERN +SW +++S Y L +F L R ++EF SVL A
Sbjct: 167 RKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCP 226
Query: 191 GNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
+ G Q+H +V K LEF V L+ +YAKC L+ + +F + WSAL
Sbjct: 227 EFVDSGKQVHCVVVKNGVLEFVS-VLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSAL 285
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I GY+Q G + +A+ LF KM +G +PSE T VL A +DV G+Q H ++K G+
Sbjct: 286 ITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGY 345
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
+ + A ++D Y+K ++ K FD + E D+V W ++IAG++ + EA+ +
Sbjct: 346 ETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGR 405
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M PN T +++L S++ A+E GKQ H +K G + I SAL MYAKCG
Sbjct: 406 MQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGS 465
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L + +F + +++VSWN M+ G +Q+G GREALE++ M+ KP+ TF+ VLSA
Sbjct: 466 LEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSA 525
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C H+G+V+ GW YFN M + + PR++H A +V + + G+ A EFI+S+ I+
Sbjct: 526 CSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMC 585
Query: 550 VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK 609
+WR LL C+ H + LG YA EK++ ++SA+++LS++Y + +VR++MK
Sbjct: 586 LWRILLPACRNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMK 645
Query: 610 EKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+ ++K+TGCSW EL++ +H F Q ++ + +L H+ D GY P
Sbjct: 646 VRGVRKETGCSWIELKSHVHVFVVGDQIHPQIEEIQGAIWRLRKHMKDDGYRP 698
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/467 (30%), Positives = 242/467 (51%), Gaps = 32/467 (6%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V + L+ Y K + +A+KLFD MPERN++SW+ +ISG++ M + AL F LM
Sbjct: 146 DVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMR 205
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
N + + +SA SGK++H + ++G+ V N L+ MY KCG L+
Sbjct: 206 LVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLN 265
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+ +F+ ++N+I+W +L++ Y Q G+ LK+F +G SEF+ VL AC+
Sbjct: 266 YSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACS 325
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ ++ G Q H + K E + A L+++YAK A + F + PDL W++
Sbjct: 326 DVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTS 385
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I GY Q GK EA+ ++ +M ++P+E+T + VL A +++ G+Q+H+ IK G
Sbjct: 386 IIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYG 445
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
+ + + Y+KC LEE + F M + D+VSWNA+I+G + H EA+EL +
Sbjct: 446 LGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFE 505
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG-------FDSNVVIG---- 417
+M EG P+ T+ +L+ S H IVK G FD ++
Sbjct: 506 EMRLEGTKPDHITFVTVLSACS-----------HMGIVKRGWAYFNMMFDEFCLVPRVEH 554
Query: 418 -SALVDMYAKCGRLNDARK-----VFDHLSSKNLVSWNTMLVGYAQH 458
+ +VD+ ++ G+LN+A++ + DH + W +L H
Sbjct: 555 YACMVDVLSRAGKLNEAKEFIESAIIDH----GMCLWRILLPACRNH 597
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 152/522 (29%), Positives = 253/522 (48%), Gaps = 8/522 (1%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLINMYGKCGLLSSAQF 132
P ++ + A + + G+ +H + + L ++++N LI Y KCG L A+
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR--KSGVAISEFSCASVLGACAV- 189
VF+ +N +S+ L+ G + L R + + + V A A+
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALN 124
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
LG Q+H L K A D FV L+N Y K + A ++F + +L +W+ +
Sbjct: 125 LGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTM 184
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I GYA A EA+ +F M +E F+ VL A + G+Q+H +++K G
Sbjct: 185 ISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGV 244
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
F V N ++ Y+KC L SL F+ + + ++W+ALI G+ + +A++L
Sbjct: 245 LEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSK 304
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M + G P+ +T +L SD+ AIE GKQTH ++K G+++ + +ALVDMYAK G
Sbjct: 305 MHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGF 364
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
DARK FD L +LV W +++ GY Q+G EAL +Y MQ KI PN+ T VL A
Sbjct: 365 TGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKA 424
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C ++ +E+G I+ +G+ P + +++ ++A G I ++ + V
Sbjct: 425 CSNLAALEQGKQIHARTIK-YGLGPELSIRSALSTMYAKCGSLEEGV-LIFRRMLQRDIV 482
Query: 550 VWRCLLSGCKT--HKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
W ++SG H L + ++ T P+ + +LS
Sbjct: 483 SWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLS 524
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 218/415 (52%), Gaps = 19/415 (4%)
Query: 192 NLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
+LK G +H+ + K L ++A LI YAKC L A VF N++ ++ +++ LI
Sbjct: 22 SLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLI 81
Query: 251 GGYAQLGKACE--AIDLFVKMFSSGLMPSEVTFSYVLGAFA-DVKETIGGRQLHSLIIKM 307
G + G ++LF +M ++ ++P TF V A A ++ RQ+H L IK
Sbjct: 82 HGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKT 141
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
FV +++++FY K + E+ K FD M E ++VSW +I+G+ + EA+ +
Sbjct: 142 ASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVF 201
Query: 368 KDM-LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M L EG+ N + ++++L+ ++ GKQ HC +VK G V + +ALV MYAK
Sbjct: 202 GLMRLVEGNL-NEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAK 260
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG LN + +F+ S KN ++W+ ++ GY+Q G +AL+++S M P++ T +GV
Sbjct: 261 CGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGV 320
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA---CRGQTRRAYEFIKSSP 543
L AC + +EEG +++ G ++ ++V ++A G R+ ++F+
Sbjct: 321 LKACSDVAAIEEGKQTHGYLLKS-GYETQIYTATALVDMYAKFGFTGDARKGFDFL---- 375
Query: 544 IEPNKVVWRCLLSG----CKTHKDLVL-GRYAAEKILSTDPEDTSAHIMLSNVYA 593
+EP+ V+W +++G K + L + GR KIL + S SN+ A
Sbjct: 376 LEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAA 430
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 182/374 (48%), Gaps = 26/374 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G V N L+ MY K +N + LF+ ++N I+WSALI+G+SQ G A
Sbjct: 239 VVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKA 298
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M P+ +T VG + AC+ GK+ HG + +SG E + + L++M
Sbjct: 299 LKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDM 358
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G A+ FD LE + + W S+++ Y Q G++ L ++ + + +E +
Sbjct: 359 YAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTM 418
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASVL AC+ L L+ G QIH+ K L + + L +YAKC L+ +F +
Sbjct: 419 ASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQ 478
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+A+I G +Q G EA++LF +M G P +TF VL A +
Sbjct: 479 RDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACS----------- 527
Query: 301 HSLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDE--MDEHDVVS 346
H I+K G++ F + + ++D S+ L E+ K F E + +H +
Sbjct: 528 HMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEA-KEFIESAIIDHGMCL 586
Query: 347 WNALIAGHLASCHY 360
W L+ C+Y
Sbjct: 587 WRILLPACRNHCNY 600
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 12/190 (6%)
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-PGFDSNVVIGSALVDMYAKCGRLNDA 433
H P ++ N+L +D +++ G+ H I+K P S + + L+ YAKCG L+ A
Sbjct: 3 HPPQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGA 62
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGRE--ALEIYSMMQENKIKPNDNTFIGVLSACV 491
+ VF++L KN+VS+N ++ G + +G LE++ M N I P+ +TF GV +A
Sbjct: 63 KLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAA 122
Query: 492 HIGLVEEGWHYFNSMIRDHGI-SPRMDHI---ASVVHLFACRGQTRRAYEFIKSSPIEPN 547
+ G ++ + GI + +D + +S+V+ + G A + P E N
Sbjct: 123 ----LNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMP-ERN 177
Query: 548 KVVWRCLLSG 557
V W ++SG
Sbjct: 178 LVSWTTMISG 187
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/658 (33%), Positives = 353/658 (53%), Gaps = 10/658 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFS---QIGMPEVALNYFR 65
++ N LL YVK DA LFDEMPERN +S+ L G++ +G+ Y R
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYACQDPVGL------YSR 136
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
L E N + + + S A +H + + G + N+ V LIN Y CG
Sbjct: 137 LHREG-HELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCG 195
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ SA+ VF+ L ++ + W ++S Y + G L++ G + ++ + L
Sbjct: 196 SVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALK 255
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
A LG +H + K E D V +GL+ LY + + A +VF+ + D+
Sbjct: 256 ASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVP 315
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
WS +I + Q G +A+D+F++M ++P+E T S +L A K + G QLH L++
Sbjct: 316 WSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV 375
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K+GF +V+N ++D Y+KCE ++ ++K F E+ +VVSWN +I G+ G+A+
Sbjct: 376 KVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALN 435
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
+ ++ L T+S+ L + + ++E G Q H +K V + ++L+DMYA
Sbjct: 436 MFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYA 495
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KCG + A+ VF+ + + ++ SWN ++ GY+ HGLGR+AL I+ +M+ + KPN TF+G
Sbjct: 496 KCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLG 555
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
VLS C + GL+++G F SMI DHGI P ++H +V LF GQ +A I+ P E
Sbjct: 556 VLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYE 615
Query: 546 PNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVR 605
P+ ++WR +LS + R +AE+IL +P+D + +++LSN+YA A W A +R
Sbjct: 616 PSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIR 675
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
K MKEK +KK+ G SW E Q +H+FS ++ ++ L++ GYVPD
Sbjct: 676 KSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPD 733
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 256/524 (48%), Gaps = 19/524 (3%)
Query: 50 GFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL 109
GFS + E ++ + +V C+ + + Y + C + D+ S K IH + + G L
Sbjct: 27 GFS-VQTAESSVQWSDSVVPCL---DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCL 82
Query: 110 NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
+ +N L+N Y K G A +FD ERN++S+V+L Y C + V L SR
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGY-ACQDPVG-----LYSR 136
Query: 170 --KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK 227
+ G ++ S L L ++ +HS + K + + FV LIN Y+ C
Sbjct: 137 LHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGS 196
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+D A VF I D+ W+ ++ Y + G +++ L +M G MP+ TF L A
Sbjct: 197 VDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKA 256
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
+ + +H I+K + V +L Y++ + ++ K F+EM ++DVV W
Sbjct: 257 SIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
+ +IA + +A+++ M PN +T S+ILN + G+Q H +VK
Sbjct: 317 SFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
GFD +V + +AL+D+YAKC +++ A K+F LSSKN+VSWNT++VGY G G +AL +
Sbjct: 377 VGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNM 436
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA 527
+ N++ + TF L AC + +E G I+ + + R+ S++ ++A
Sbjct: 437 FREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNN-AKRVAVSNSLIDMYA 495
Query: 528 CRGQTRRAYEFIKSSPIEPNKVV-WRCLLSGCKTHKDLVLGRYA 570
G + A + +E V W L+SG TH LGR A
Sbjct: 496 KCGDIKVAQTVF--NEMETIDVASWNALISGYSTHG---LGRQA 534
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 250/494 (50%), Gaps = 12/494 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ N L+ Y ++ A+ +F+ + ++++ W+ ++S + + G E +
Sbjct: 172 IVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDS 231
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M PN YT+ A+ A G K +HG++ ++ EL+ V L+ +
Sbjct: 232 LQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQL 291
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G +S A VF+ + + + W +++ +CQ G + IF+ R+ V +EF+
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTL 351
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L CA+ +G Q+H LV K + D +V+ LI++YAKCEK+D A ++F+ +
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSS 411
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+ +I GY LG+ +A+++F + + + +EVTFS LGA A + G Q+
Sbjct: 412 KNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQV 471
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L IK + V+N+++D Y+KC ++ + F+EM+ DV SWNALI+G+
Sbjct: 472 HGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLG 531
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSA 419
+A+ + M PN T+ +L+ S+ I+ G+ I G + + +
Sbjct: 532 RQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTC 591
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVG----YAQHGLGREALEIYSMMQEN 474
+V ++ + G+L+ A + + + +++ W ML Y + R A EI
Sbjct: 592 MVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEIL------ 645
Query: 475 KIKPNDNTFIGVLS 488
KI P D +LS
Sbjct: 646 KINPKDEATYVLLS 659
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/681 (32%), Positives = 385/681 (56%), Gaps = 13/681 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEM--PERNVISWSALISGFSQIGMPE 58
+ TS + + N L+ +Y K + A +F M +R+V+S+S++IS F+
Sbjct: 78 LTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCL 137
Query: 59 VALNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS-NC 116
A+ F +L++ + PN Y + + AC G ++G + G + ++G +SHV C
Sbjct: 138 KAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGY-FDSHVCVGC 196
Query: 117 -LINMYGK-CGL--LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKS 171
LI+M+ K C L L SA+ VFD E+N ++W +++ Q G + + +FL + S
Sbjct: 197 ELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSS 256
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G F+ ++ CA + L +G ++HS V + L D V L+++YAKC + A
Sbjct: 257 GYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEA 316
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACE--AIDLFVKMF-SSGLMPSEVTFSYVLGAF 288
+VF ++ ++ +W+AL+ GY + G E A+ +F M G+ P+ TFS VL A
Sbjct: 317 RKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKAC 376
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
A + + G Q+H IK+G S+ V N ++ Y+K +E + K FD + E ++VS
Sbjct: 377 ASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSET 436
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
+ ++ + +L +++ + G + +TY+++L+ ++ I I G+Q H +VK
Sbjct: 437 VVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKI 496
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
GF +++ + +AL+ MY+KCG A +VF+ + N+++W +++ G+A+HG +ALE++
Sbjct: 497 GFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELF 556
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
M E +KPND T+I VLSAC H+GL++E W +F SM +HGI PRM+H A +V L
Sbjct: 557 YNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGR 616
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIML 588
G A EFI S P + + +VWR L C+ H++ LG +AA+ IL +P D + +I+L
Sbjct: 617 SGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILL 676
Query: 589 SNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVM 648
SN+YA W++ A +RK MK+K + K+ G SW E++N++H F + ++E +
Sbjct: 677 SNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKL 736
Query: 649 NQLSVHLFDGGYVPDPIYSSH 669
++L++ + + GYVP+ + H
Sbjct: 737 DELALKIKNVGYVPNTDFVLH 757
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 143/290 (49%), Gaps = 16/290 (5%)
Query: 279 VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE 338
+T S +L K T G+ LH + T + N+++ YSK + F
Sbjct: 53 ITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQS 112
Query: 339 MD--EHDVVSWNALIAGHLASCHYGEAIELLKDMLFE-GHCPNLYTYSNILNISSDIPAI 395
M+ + DVVS++++I+ + + +A+E+ +L + G PN Y ++ ++
Sbjct: 113 MENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFF 172
Query: 396 EWGKQTHCCIVKPG-FDSNVVIGSALVDMYAKCGRLND---ARKVFDHLSSKNLVSWNTM 451
+ G ++K G FDS+V +G L+DM+ K L D ARKVFD + KN+V+W M
Sbjct: 173 KTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLM 232
Query: 452 LVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
+ AQ+G EA++++ M+ + P+ T G++S C I + G + +IR
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRS- 291
Query: 511 GISPRMDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G+ + S+V ++A G + R+ ++ ++ E N + W L++G
Sbjct: 292 GLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMR----EHNVMSWTALVNG 337
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 347/661 (52%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G +V + L+ MY K ++DA + F M ERN +SW A I+G Q +
Sbjct: 178 VKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGM 237
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M L + Y A +CA+ + +++H ++ + V ++++Y
Sbjct: 238 ELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVY 297
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G L A+ F N + +++ + G +++F +SGV S +
Sbjct: 298 AKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLS 357
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
V ACA + G+Q+H L K + D V +++LY KC+ L A VF ++
Sbjct: 358 GVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQR 417
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +W+A+I Q + I +M SG+ P + T+ VL A A ++ G +H
Sbjct: 418 DSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVH 477
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
IK G FV++TV+D Y KC + E+ K D + ++VSWN++I+G +
Sbjct: 478 GKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSE 537
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA +ML G P+ +TY+ +L+ +++ IE GKQ H I+K + I S LV
Sbjct: 538 EAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLV 597
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAKCG + D+ +F+ + VSWN M+ GYA HG G EALE++ MQ + PN
Sbjct: 598 DMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHA 657
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL AC H+GL+++G YF+ M + + P+++H A +V + + A EFI+S
Sbjct: 658 TFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRS 717
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
PIE + VVW+ LLS CK +D+ + AA +L DP+D S +I+LSNVYA + W +
Sbjct: 718 MPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDV 777
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
++ R++M++ L+K+ GCSW E+Q++MH F + +++E++N L + GY
Sbjct: 778 SRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLSGYE 837
Query: 662 P 662
P
Sbjct: 838 P 838
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/502 (30%), Positives = 261/502 (51%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H + +++N +L YV + A LF MP+ +V+SW+ LISG+ Q GM ++
Sbjct: 82 HRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSME 141
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + + T + +C D G +IH ++GLE + + L++MYGKC
Sbjct: 142 MSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRS 201
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A F ERNS+SW + ++ Q ++ G+++F+ ++ G+ +S+ + AS +
Sbjct: 202 LDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRS 261
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA + L Q+H+ K D+ V ++++YAK L A R F + ++
Sbjct: 262 CAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETC 321
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+A++ G + G EA+ LF M SG+ ++ S V A A+VK G Q+H L +K
Sbjct: 322 NAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVK 381
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
GF V N +LD Y KC+ L E+ F EM++ D VSWNA+IA + Y + I
Sbjct: 382 SGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAH 441
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
L +ML G P+ +TY ++L + + ++E+G H +K G + + S +VDMY K
Sbjct: 442 LNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCK 501
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + +A+K+ D + + LVSWN+++ G++ EA +S M + +KP+ T+ V
Sbjct: 502 CGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATV 561
Query: 487 LSACVHIGLVEEGWHYFNSMIR 508
L C ++ +E G +I+
Sbjct: 562 LDTCANLATIELGKQIHGQIIK 583
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 160/617 (25%), Positives = 275/617 (44%), Gaps = 78/617 (12%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
++++ + A A R +G+ H RM SG + VSNCL+ MY +CG + A VFD
Sbjct: 20 FSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDT 79
Query: 137 SLERNSISWVSLL-------------------------------SSYCQCGEHVHGLKIF 165
R+++SW ++L S YCQ G + + +
Sbjct: 80 MPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLS 139
Query: 166 LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC 225
+ + GVA+ + A +L +C L +L +G+QIH+L K LE D L+++Y KC
Sbjct: 140 MEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKC 199
Query: 226 EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
LD A R F + + +W A I G Q + ++LFV+M GL S+ ++
Sbjct: 200 RSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAF 259
Query: 286 GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
+ A + RQLH+ IK FSS V ++D Y+K L ++ + F + H+V
Sbjct: 260 RSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVE 319
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
+ NA++ G + + EA++L + M G ++ + S + + +++ G Q HC
Sbjct: 320 TCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLA 379
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
VK GFD +V + +A++D+Y KC L +A VF + ++ VSWN ++ Q+ + +
Sbjct: 380 VKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTI 439
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHI-----GLVEEGWHYFNSMIRDHGISPRM---- 516
+ M + ++P+D T+ VL AC + GLV G + + D +S +
Sbjct: 440 AHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMY 499
Query: 517 -------------DHIA--------SVVHLFACRGQTRRAYEFIK---SSPIEPNKVVWR 552
D I S++ F+ Q+ A F ++P+ +
Sbjct: 500 CKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYA 559
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK-----I 607
+L C + LG+ +I+ + ML + Y + + D AK +
Sbjct: 560 TVLDTCANLATIELGKQIHGQIIKQE--------MLGDEYISSTLVDMYAKCGNMPDSLL 611
Query: 608 MKEKSLKKDTGCSWTEL 624
M EK+ K D SW +
Sbjct: 612 MFEKARKLDF-VSWNAM 627
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 121/296 (40%), Gaps = 37/296 (12%)
Query: 277 SEVTFS--YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+ TFS Y L A A G+ H+ ++ GF TFV+N +L Y++C +
Sbjct: 16 ATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHG 75
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM----------LFEGHCP------- 377
FD M D VSWN ++ ++ + A L M L G+C
Sbjct: 76 VFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNS 135
Query: 378 --------------NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ T + +L + + G Q H VK G +++V GSALVDM
Sbjct: 136 VGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDM 195
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y KC L+DA + F + +N VSW + G Q+ +E++ MQ + + +
Sbjct: 196 YGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAY 255
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ---TRRAY 536
+C + + I++ S R+ A +V ++A G RRA+
Sbjct: 256 ASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTA-IVDVYAKAGNLVDARRAF 310
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/638 (32%), Positives = 358/638 (56%), Gaps = 13/638 (2%)
Query: 7 HPNVITY--NHLLLMYVKFSRIND--AQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
HP + N LL Y + A +L DEMP RN +S++ LIS +S+ G+P AL
Sbjct: 29 HPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSRAGLPGRALE 88
Query: 63 YFRLMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F L + +TY A++AC+ D R+GK +H GL +SN L +MY
Sbjct: 89 TFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMY 148
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
CG + A+ VFDA+ E + +SW SLLS Y + G LK+F L G+ + F+
Sbjct: 149 ASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALG 208
Query: 182 SVLGACAVLGNL--KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S++ CA ++ + +H V K L+ D F+A +I++YAK L A +F ++
Sbjct: 209 SIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVP 268
Query: 240 LPDLTAWSALIGGY----AQLGKAC--EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
P++ ++A+I G+ A +GK EA+ L+ +M S G+ PSE TFS +L A E
Sbjct: 269 DPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGE 328
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+Q+H ++K F ++ + ++D YS +E+ + F + + D+V+W ++I+G
Sbjct: 329 FGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISG 388
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ + + +A+ L ++ + G P+L+T S+++N + + G+Q C +K GF+
Sbjct: 389 CVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRF 448
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+G++ + M A+ G ++ + F + S+++VSW+ ++ +AQHG R+AL I++ M
Sbjct: 449 TAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMN 508
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
K+ PN+ TF+ VL+AC H GLV++G Y+ M ++G+SP + H+ VV L G+
Sbjct: 509 AKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLA 568
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A FI+ S + VVWR LL+ C+ H D+ G+ A++I+ +P ++++++L N+Y
Sbjct: 569 DAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYL 628
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+A +K R +MKE+ +KK+ G SW EL++ +H F
Sbjct: 629 DAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSF 666
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 228/468 (48%), Gaps = 10/468 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G V N L MY + +A+++FD E + +SW++L+SG+ + G E L
Sbjct: 130 VLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETL 189
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARS--GKEIHGRMYRSGLELNSHVSNCLIN 119
F LM L N + + CAS D + +HG + ++GL+ + +++ +I+
Sbjct: 190 KVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMID 249
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ----CGEHV--HGLKIFLLSRKSGV 173
MY K G L++A +F + + N I + ++++ +C+ G+ V L ++ + G+
Sbjct: 250 MYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGM 309
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
SEF+ +S+L AC + G G QIH V K + D ++ LI+LY+ ++ R
Sbjct: 310 QPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYR 369
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
F ++ D+ W+++I G Q +A+ LF + GL P T S V+ A A +
Sbjct: 370 CFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAV 429
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G Q+ L IK GF+ FT + N+ + ++ ++ + F EM+ DVVSW+A+I+
Sbjct: 430 ARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISS 489
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDS 412
H +A+ + +M+ PN T+ N+L S ++ G + + + G
Sbjct: 490 HAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSP 549
Query: 413 NVVIGSALVDMYAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQHG 459
+ + +VD+ + GRL DA + D + V W ++L HG
Sbjct: 550 TIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHG 597
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 205/414 (49%), Gaps = 19/414 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGF----SQIG- 55
++ +G ++ + ++ MY K + +A LF +P+ NVI ++A+I+GF + +G
Sbjct: 232 VVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGK 291
Query: 56 -MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
+ AL+ + M ++P+ +T+ + AC G+ GK+IHG++ + + ++
Sbjct: 292 EVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIG 351
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
+ LI++Y G + F + +++ ++W S++S Q L++F S G+
Sbjct: 352 SALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLK 411
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLAS 232
F+ +SV+ ACA L + G QI L K F++F AMG I++ A+ +D +
Sbjct: 412 PDLFTMSSVMNACASLAVARTGEQIQCLAIKYG--FNRFTAMGNSFIHMCARSGDVDAVT 469
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
R F ++ D+ +WSA+I +AQ G A +A+ +F +M ++ + P+EVTF VL A +
Sbjct: 470 RRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGG 529
Query: 293 ETIGGRQLHSLII-KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNAL 350
G + + ++ + G S V+D + L ++ + H D V W +L
Sbjct: 530 LVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSL 589
Query: 351 IAGHLASCH-YG--EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
LASC +G E +L+ D + + + +Y + N+ D + +T
Sbjct: 590 ----LASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKT 639
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/660 (32%), Positives = 360/660 (54%), Gaps = 3/660 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVIS-WSALISGFSQIGMPEV 59
++T G ++ L+ Y+ + A+ +FD M IS W+ L++G+++ M
Sbjct: 29 VVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVE 88
Query: 60 ALNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
AL F +L+ L+P+ YTY AC GK IH + ++GL ++ V + L+
Sbjct: 89 ALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLV 148
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MYGKC A ++F+ E++ W +++S Y Q G L+ F L R+ G +
Sbjct: 149 GMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSV 208
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ + + +CA L +L GM+IH + D F++ L+++Y KC L++A +F +
Sbjct: 209 TITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQM 268
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ AW+++I GY G I LF +M++ G+ P+ T S ++ + + G+
Sbjct: 269 PKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGK 328
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H I+ FV ++++D Y KC +E + K F + + VVSWN +I+G++A
Sbjct: 329 FVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEG 388
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA+ L +M + T++++L S + A+E GK+ H I++ D+N V+
Sbjct: 389 KLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMG 448
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAKCG +++A VF L ++LVSW +M+ Y HG ALE+++ M ++ +KP
Sbjct: 449 ALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKP 508
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ F+ +LSAC H GLV+EG +YFN MI +GI PR++H + ++ L G+ AYE
Sbjct: 509 DRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEI 568
Query: 539 IKSSP-IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
++ +P I + + L S C+ H+++ LG A ++ DP+D+S +I+LSN+YA A+
Sbjct: 569 LQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHK 628
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
WDE VR MKE LKK+ GCSW E+ K+ F + + + ++ LS H+ D
Sbjct: 629 WDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMED 688
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 185/377 (49%), Gaps = 4/377 (1%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP- 241
+L AC +LK G IH V L+ D F+ LIN Y C D A VF N++ P
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFADVKETIGGRQL 300
+++ W+ L+ GY + EA++LF K+ L P T+ V A + + G+ +
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMI 128
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK G V ++++ Y KC E+++ F+EM E DV WN +I+ + S ++
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A+E M G PN T + ++ + + + G + H ++ GF + I SAL
Sbjct: 189 KDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMY KCG L A ++F+ + K +V+WN+M+ GY G ++++ M +KP
Sbjct: 249 VDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTL 308
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
T ++ C + EG IR+ I P + +S++ L+ G+ A + K
Sbjct: 309 TTLSSLIMVCSRSARLLEGKFVHGYTIRNR-IQPDVFVNSSLMDLYFKCGKVELAEKIFK 367
Query: 541 SSPIEPNKVVWRCLLSG 557
P + V W ++SG
Sbjct: 368 LIP-KSKVVSWNVMISG 383
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/672 (32%), Positives = 365/672 (54%), Gaps = 18/672 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N L+ +Y K K+FD + ERN +SW++LIS E+AL FR M+
Sbjct: 128 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 187
Query: 69 CCVLEPNYYTYVGAVSACASRGDARS---GKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
+EP+ +T V AC++ GK++H R G ELNS + N L+ MYGK G
Sbjct: 188 DEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMG 246
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L+S++ + + R+ ++W ++LSS CQ + + L+ GV F+ +SVL
Sbjct: 247 KLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLP 306
Query: 186 ACAVLGNLKVGMQIHSLVFK-CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC+ L L+ G ++H+ K +L+ + FV L+++Y C+++ RVF + +
Sbjct: 307 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIG 366
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W+A+I GYAQ EA+ LF++M S+GL+ + T + V+ A +H
Sbjct: 367 LWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGF 426
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
++K G FV N ++D YS+ ++ + + F +M++ D+V+WN +I G++ S + +A
Sbjct: 427 VVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDA 486
Query: 364 IELLKDM-LFEGHC----------PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
+ +L M + E PN T IL + + A+ GK+ H +K +
Sbjct: 487 LLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 546
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+V +GSALVDMYAKCG L +RKVFD + +N+++WN +++ Y HG ++A+++ MM
Sbjct: 547 DVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMM 606
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+KPN+ TFI V +AC H G+V EG F +M +D+G+ P DH A VV L G+
Sbjct: 607 VQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRV 666
Query: 533 RRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
+ AY+ I P +K W LL C+ H +L +G AA+ ++ +P S +++L+N+
Sbjct: 667 KEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI 726
Query: 592 YAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
Y+ A +W + +VR+ MK + ++K+ GCSW E +++H F + Q L + L
Sbjct: 727 YSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETL 786
Query: 652 SVHLFDGGYVPD 663
+ GY+PD
Sbjct: 787 WERMRKEGYIPD 798
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 257/526 (48%), Gaps = 27/526 (5%)
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVS 114
+ E L Y ++V + +P+ + + + A A D GK+IH +Y+ G ++S V+
Sbjct: 74 LREAVLTYIDMIVLGI-KPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVA 132
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N L+N+Y KCG + VFD ERN +SW SL+SS C + L+ F V
Sbjct: 133 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVE 192
Query: 175 ISEFSCASVLGACA---VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
S F+ SV AC+ + L +G Q+H+ + E + F+ L+ +Y K KL +
Sbjct: 193 PSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASS 251
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+ + + DL W+ ++ Q + EA++ +M G+ P T S VL A + +
Sbjct: 252 KVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHL 311
Query: 292 KETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ G++LH+ +K G +FV + ++D Y C+ + + FD M + + WNA+
Sbjct: 312 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAM 371
Query: 351 IAGHLASCHYGEAIELLKDM-LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
I G+ + + EA+ L +M G N T + ++ A + H +VK G
Sbjct: 372 ITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRG 431
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
D + + +AL+DMY++ G+++ A+++F + ++LV+WNT++ GY +AL +
Sbjct: 432 LDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLH 491
Query: 470 MMQ--ENK---------IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
MQ E K +KPN T + +L +C + + +G I+++ ++ +
Sbjct: 492 KMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN-LATDVAV 550
Query: 519 IASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+++V ++A C +R+ ++ I PI N + W ++ H
Sbjct: 551 GSALVDMYAKCGCLQMSRKVFDQI---PIR-NVITWNVIVMAYGMH 592
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 126/266 (47%), Gaps = 14/266 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + N L+ MY + +I+ A+++F +M +R++++W+ +I+G+ E A
Sbjct: 427 VVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDA 486
Query: 61 LNYFRLMVC-----------CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL 109
L M L+PN T + + +CA+ GKEIH ++ L
Sbjct: 487 LLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 546
Query: 110 NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
+ V + L++MY KCG L ++ VFD RN I+W ++ +Y G + + +
Sbjct: 547 DVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMM 606
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKL 228
GV +E + SV AC+ G + G++I +++ +E +++L + ++
Sbjct: 607 VQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRV 666
Query: 229 DLASRVFSNI--QLPDLTAWSALIGG 252
A ++ + I AWS+L+G
Sbjct: 667 KEAYQLINLIPRNFDKAGAWSSLLGA 692
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 13/202 (6%)
Query: 298 RQLHSLIIKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
RQ H +++ +S T VA+TV SK + +S H W L+ +
Sbjct: 22 RQKHPYLLRATPTSVTDDVASTVYGAPSK--FISQS---------HSPEWWIDLLRSKVR 70
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD-SNVV 415
S EA+ DM+ G P+ + + +L +D+ ++ GKQ H + K G+ +V
Sbjct: 71 SNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVT 130
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ + LV++Y KCG KVFD +S +N VSWN+++ ALE + M +
Sbjct: 131 VANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDED 190
Query: 476 IKPNDNTFIGVLSACVHIGLVE 497
++P+ T + V AC + + E
Sbjct: 191 VEPSSFTLVSVALACSNFPMPE 212
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/625 (33%), Positives = 346/625 (55%), Gaps = 10/625 (1%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY K + A++LFD MPERN+IS+++LISG++Q+G E A+ F L+ + +T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y GA+ C R D G+ +HG + +GL + N LI+MY KCG L A +FD
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV---LGNLKV 195
ER+ +SW SL+S Y + G L + + G+ ++ ++ SVL AC + G ++
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
GM IH K +EFD V L+++YAK L A ++FS + ++ ++A+I G+ Q
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 256 LGK-----ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
+ + + EA LF+ M GL PS TFS VL A + K GRQ+H+LI K F
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S F+ + +++ Y+ E+ ++ F + D+ SW ++I H+ + A +L +
Sbjct: 391 SDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ- 449
Query: 371 LFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
LF H P YT S +++ +D A+ G+Q +K G D+ + ++ + MYAK G
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGN 509
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ A +VF + + ++ +++ M+ AQHG EAL I+ M+ + IKPN F+GVL A
Sbjct: 510 MPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C H GLV +G YF M D+ I+P H +V L G+ A I SS + + V
Sbjct: 570 CCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV 629
Query: 550 VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK 609
WR LLS C+ +KD V+G+ AE+++ +PE + ++++L N+Y ++ + +VR++M+
Sbjct: 630 TWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMR 689
Query: 610 EKSLKKDTGCSWTELQNKMHYFSTS 634
++ +KK+ SW + N+ H F+ +
Sbjct: 690 DRGVKKEPALSWIVIGNQTHSFAVA 714
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 150/488 (30%), Positives = 240/488 (49%), Gaps = 20/488 (4%)
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV 146
A G GK HG M +S L ++ N L+NMY KC L A+ +FD ERN IS+
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFN 117
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
SL+S Y Q G + +++FL +R++ + + +F+ A LG C +L +G +H LV
Sbjct: 118 SLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVN 177
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
L F+ LI++Y+KC KLD A +F D +W++LI GY ++G A E ++L
Sbjct: 178 GLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLL 237
Query: 267 VKMFSSGLMPSEVTFSYVLGAFA-DVKETI--GGRQLHSLIIKMGFSSFTFVANTVLDFY 323
KM GL + VL A ++ E G +H K+G V +LD Y
Sbjct: 238 AKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMY 297
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY-----GEAIELLKDMLFEGHCPN 378
+K L+E++K F M +VV++NA+I+G L EA +L DM G P+
Sbjct: 298 AKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPS 357
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T+S +L S +E+G+Q H I K F S+ IGSAL+++YA G D + F
Sbjct: 358 PSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFA 417
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
S +++ SW +M+ + Q+ A +++ + + I+P + T ++SAC +
Sbjct: 418 STSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSS 477
Query: 499 GWHYFNSMIRDHGISPRMDHIASV----VHLFACRGQTRRAYE-FIKSSPIEPNKVVWRC 553
G I+ + I +D SV + ++A G A + FI+ P+ +
Sbjct: 478 GEQ-----IQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ--NPDVATYSA 530
Query: 554 LLSGCKTH 561
++S H
Sbjct: 531 MISSLAQH 538
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y + ++ ++ GK H ++K + + + + L++MY KC L AR++FD +
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
+N++S+N+++ GY Q G +A+E++ +E +K + T+ G L C ++ G
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-E 168
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ ++ +G+S ++ I ++ +++ G+ +A E ++V W L+SG
Sbjct: 169 LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISG 223
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/658 (31%), Positives = 358/658 (54%), Gaps = 23/658 (3%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N + NHL+ MY RN +SW+++I+ Q G AL F M+
Sbjct: 85 NTVLGNHLITMY-----------------GRNPVSWASVIAAHVQNGRAGDALGLFSSML 127
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ + AV AC GD +G+++H +S + V N L+ MY K GL+
Sbjct: 128 RSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVD 187
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA-ISEFSCASVLGAC 187
+F+ +++ ISW S+++ + Q G + L++F G +EF S AC
Sbjct: 188 DGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRAC 247
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+G+ + G QIH L K L+ D +V L ++YA+C+ LD A F I+ PDL +W+
Sbjct: 248 GAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWN 307
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+++ Y+ G EA+ LF +M SGL P +T +L A GR +HS ++K+
Sbjct: 308 SIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKL 367
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
G V N++L Y++C L ++ F E+ + DVV+WN+++ H E ++L
Sbjct: 368 GLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLF 427
Query: 368 KDMLFEGHCPNL--YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L P+L + +N+L+ S+++ E KQ H K G + ++ + L+D YA
Sbjct: 428 S--LLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYA 485
Query: 426 KCGRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG L+DA ++F+ + +++++ SW++++VGYAQ G +EA +++S M+ I+PN TFI
Sbjct: 486 KCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFI 545
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVL+AC +G V EG +Y++ M ++GI P +H + +V L A G+ A FI P
Sbjct: 546 GVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPF 605
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP+ ++W+ LL+ K H D+ +G+ AAE IL+ DP ++A+++L N+YA + W+E A++
Sbjct: 606 EPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARL 665
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+K M+ +KK G SW +L+ ++ F + + +++ ++ + + + GYVP
Sbjct: 666 KKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEMIKAGYVP 723
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 205/427 (48%), Gaps = 25/427 (5%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSG-------LELNSHVSNCLINMYGKCGLLSSAQ 131
Y VSAC+ G+ +H + S L N+ + N LI MYG
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG--------- 97
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
RN +SW S+++++ Q G L +F +SG A +F+ S + AC LG
Sbjct: 98 --------RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
++ G Q+H+ K D V L+ +Y+K +D +F I+ DL +W ++I
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 209
Query: 252 GYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
G+AQ G EA+ +F +M G P+E F A V G Q+H L IK
Sbjct: 210 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 269
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
+V ++ D Y++C+ L+ + F ++ D+VSWN+++ + EA+ L +M
Sbjct: 270 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 329
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
G P+ T +L A+ G+ H +VK G D +V + ++L+ MYA+C L
Sbjct: 330 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 389
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ A VF + +++V+WN++L AQH E L+++S++ +++ + + VLSA
Sbjct: 390 SSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSAS 449
Query: 491 VHIGLVE 497
+G E
Sbjct: 450 AELGYFE 456
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 3/255 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V N LL MY + S ++ A +F E+ +++V++W+++++ +Q PE
Sbjct: 364 LVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEV 423
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F L+ + + +SA A G K++H +++GL + +SN LI+
Sbjct: 424 LKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDT 483
Query: 121 YGKCGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG L A +F+ R+ SW SL+ Y Q G +F R G+ + +
Sbjct: 484 YAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVT 543
Query: 180 CASVLGACAVLGNLKVGMQIHSLV-FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
VL AC+ +G + G +S++ + + + +++L A+ KL A+ +
Sbjct: 544 FIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQM 603
Query: 239 QL-PDLTAWSALIGG 252
PD+ W L+
Sbjct: 604 PFEPDIIMWKTLLAA 618
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/655 (33%), Positives = 340/655 (51%), Gaps = 51/655 (7%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA--LNYFRLM 67
V N L+ +Y K R+ +A+ +F+ + ++V+SW+ +I+G+SQ G + + F+ M
Sbjct: 40 VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRM 99
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
PN +T+ G +A ++ DA G+ H + + V + L+NMY K GL
Sbjct: 100 RAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLT 159
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A+ VFD ERNS+SW +++S Y L +F L R+ +EF SVL A
Sbjct: 160 PEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSAL 219
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ + G QIH + K L V L+ +YAKC LD A + F + WS
Sbjct: 220 TLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWS 279
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A+I G AQ G + +A+ LF M SG+ PSE TF V+ A +D+ G+Q+H ++K+
Sbjct: 280 AMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKL 339
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
GF S +V ++D Y+KC + ++ K FD + E D+V W ++I G++ + +A+ L
Sbjct: 340 GFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLY 399
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M EG PN T +++L S + A+E GKQ H VK GF V IGSAL MYAKC
Sbjct: 400 GRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKC 459
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G L D VF + +++++SWN M+ G +Q+G G+EALE++ MQ KP+ TF+ +L
Sbjct: 460 GCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNIL 519
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC H+GLVE GW YF M + G+ PR++H A +V + + G+ + A EF +S+ I
Sbjct: 520 SACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATI--- 576
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
+ MW++ +VR++
Sbjct: 577 ----------------------------------------------DHGMWEDVERVRRM 590
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
MK + + K+ GCSW EL++ +H F Q D+H + QLS + D GY P
Sbjct: 591 MKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEP 645
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 155/528 (29%), Positives = 263/528 (49%), Gaps = 28/528 (5%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V + L+ MY K +A+K+FD MPERN +SW+ +ISG++ + AL FRLM
Sbjct: 142 DVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMR 201
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
N + + +SA +GK+IH ++GL V N L+ MY KCG L
Sbjct: 202 REEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLD 261
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A F+ S ++NSI+W ++++ Q G+ LK+F SG+ SEF+ V+ AC+
Sbjct: 262 DALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACS 321
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
LG G Q+H + K E +V L+++YAKC + A + F +Q PD+ W++
Sbjct: 322 DLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTS 381
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+IGGY Q G+ +A+ L+ +M G++P+E+T + VL A + + G+Q+H+ +K G
Sbjct: 382 MIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYG 441
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F + + + Y+KC L++ F M DV+SWNA+I+G + EA+EL +
Sbjct: 442 FGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFE 501
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIE--WGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+M EG P+ T+ NIL+ S + +E WG + G D V + +VD+ ++
Sbjct: 502 EMQLEGTKPDYVTFVNILSACSHMGLVERGWG-YFRMMFDEFGMDPRVEHYACMVDILSR 560
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
G+L +A + + + HG+ + + MM+ +
Sbjct: 561 AGKLKEAIEFTESAT--------------IDHGMWEDVERVRRMMKLRGVSKEPGCSWIE 606
Query: 487 LSACVHIGLVEEGWH-----------YFNSMIRDHGISPRMDHIASVV 523
L + VH+ +V++ H + ++D G P D ++ +
Sbjct: 607 LKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPATDSFSAAL 654
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 213/371 (57%), Gaps = 11/371 (2%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+L+ G +H+ + K + ++A L+NLYAKC++L A VF IQ D+ +W+ +I
Sbjct: 21 SLQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIIN 79
Query: 252 GYAQLGKACEA--IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
GY+Q G + + ++LF +M + P+ TF+ V A + + + GGR H++ IKM
Sbjct: 80 GYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDS 139
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
FV +++++ Y K L E+ K FD M E + VSW +I+G+ + EA+ L +
Sbjct: 140 CRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRL 199
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M E N + ++++L+ + + GKQ HC VK G S V +G+ALV MYAKCG
Sbjct: 200 MRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGS 259
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L+DA + F+ S KN ++W+ M+ G AQ G +AL+++S M + I+P++ TF+GV++A
Sbjct: 260 LDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINA 319
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRG--QTRRAYEFIKSSPIEP 546
C +G EG + +++ G ++ + ++V ++A C R+ +++++ EP
Sbjct: 320 CSDLGAAWEGKQVHDYLLK-LGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQ----EP 374
Query: 547 NKVVWRCLLSG 557
+ V+W ++ G
Sbjct: 375 DIVLWTSMIGG 385
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 152/286 (53%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G V N L+ MY K ++DA + F+ ++N I+WSA+I+G +Q G + AL
Sbjct: 236 VKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKAL 295
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + P+ +T+VG ++AC+ G A GK++H + + G E +V L++MY
Sbjct: 296 KLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMY 355
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + A+ FD E + + W S++ Y Q GE+ L ++ G+ +E + A
Sbjct: 356 AKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMA 415
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SVL AC+ L L+ G QIH+ K + + L +YAKC L + VF +
Sbjct: 416 SVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR 475
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
D+ +W+A+I G +Q G EA++LF +M G P VTF +L A
Sbjct: 476 DVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSA 521
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + L+ MY K S I DA+K FD + E +++ W+++I G+ Q G E AL+ +
Sbjct: 340 GFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLY 399
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M + PN T + AC+S GK+IH R + G L + + L MY KC
Sbjct: 400 GRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKC 459
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L VF R+ ISW +++S Q G L++F + G + ++L
Sbjct: 460 GCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNIL 519
Query: 185 GACAVLGNLKVGMQIHSLVF 204
AC+ +G ++ G ++F
Sbjct: 520 SACSHMGLVERGWGYFRMMF 539
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 95/177 (53%), Gaps = 17/177 (9%)
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+++ GK H I+K S V I ++LV++YAKC RL +A+ VF+ + +K++VSWN ++
Sbjct: 21 SLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIIN 79
Query: 454 GYAQHGLGREA--LEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
GY+QHG + +E++ M+ PN +TF GV +A LV+ H
Sbjct: 80 GYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAST--LVDAAGGRLA-----HA 132
Query: 512 ISPRMDHI------ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
++ +MD +S+++++ G T A + + P E N V W ++SG + K
Sbjct: 133 VAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMP-ERNSVSWATMISGYASQK 188
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/553 (35%), Positives = 326/553 (58%), Gaps = 3/553 (0%)
Query: 110 NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC--QCGEHVHGLKIFLL 167
N +V L+NMY K G++S A+ VFD +RNS SW ++++ Y +C E L +L
Sbjct: 46 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 105
Query: 168 SRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK 227
+ SEF +VL A +V L +G Q+H L+ K L V L+ +YAK
Sbjct: 106 -EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGC 164
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ A VF + + + WSA+I GYAQ G+A A+ +F +M ++G P+E TF VL A
Sbjct: 165 MGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNA 224
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
+D+ G+Q H L++K+GF +V + ++D Y+KC + ++ + FD++ E D+V W
Sbjct: 225 SSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLW 284
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
A+++GH+ + + EA+ L M EG P+ T ++ L + I A+E GKQ H IVK
Sbjct: 285 TAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVK 344
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
G +GSAL MY+KCG L D VF + +++++WN+++ G++Q+G G AL++
Sbjct: 345 YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDL 404
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA 527
+ M+ P++ TFI +L AC H+GLV+ GW YF+ M +D+G++PR+DH A +V + +
Sbjct: 405 FEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILS 464
Query: 528 CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIM 587
G + A +FI+S I+ +WR +L C++ +D +G YA E+++ D+SA+I+
Sbjct: 465 RAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYIL 524
Query: 588 LSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEV 647
LSN+YA W++ +VR +M+ + + KD GCSW EL +++H F + +++
Sbjct: 525 LSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQ 584
Query: 648 MNQLSVHLFDGGY 660
+ +L+ H+ D GY
Sbjct: 585 LRRLAKHMKDEGY 597
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/435 (31%), Positives = 233/435 (53%), Gaps = 2/435 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
NV LL MY K ++DA+++FD MP+RN SWS +++G++ E A + FRLM+
Sbjct: 46 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 105
Query: 69 C-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
C E + + +SA + G+++HG + + GL V N L+ MY K G +
Sbjct: 106 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 165
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+A VF++S ERNSI+W ++++ Y Q GE + +F +G +EF+ VL A
Sbjct: 166 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 225
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ LG L VG Q H L+ K E +V L+++YAKC + A F + D+ W+
Sbjct: 226 SDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWT 285
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A++ G+ Q G+ EA+ L+ +M G++PS+ T + L A A + G+QLH+ I+K
Sbjct: 286 AMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKY 345
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
G V + + YSKC LE+ + F + + DV++WN++I+G + A++L
Sbjct: 346 GLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLF 405
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAK 426
++M EG P+ T+ NIL S + ++ G + + K G + + +VD+ ++
Sbjct: 406 EEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSR 465
Query: 427 CGRLNDARKVFDHLS 441
G L +A+ + ++
Sbjct: 466 AGMLKEAKDFIESIT 480
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 182/354 (51%), Gaps = 2/354 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G V N L+ MY K + A +F+ ERN I+WSA+I+G++Q G + A
Sbjct: 140 IVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSA 199
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F M P +T+VG ++A + G GK+ HG M + G E+ +V + L++M
Sbjct: 200 VSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDM 259
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG ++ A+ FD E + + W +++S + Q GEH L ++ K G+ S+ +
Sbjct: 260 YAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTI 319
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS L ACA + L+ G Q+H+ + K L V L +Y+KC L+ VF I
Sbjct: 320 ASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPD 379
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ AW+++I G++Q G A+DLF +M G +P +TF +L A + + G +
Sbjct: 380 RDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEY 439
Query: 301 HSLIIK-MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIA 352
SL+ K G + ++D S+ +L+E+ + + +H W ++
Sbjct: 440 FSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLG 493
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/671 (31%), Positives = 351/671 (52%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G +V + L+ MY K + DA + F M ERN +SW A I+G Q L
Sbjct: 163 VKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGL 222
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M L + Y +CA+ + +++H ++ + V ++++Y
Sbjct: 223 ELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVY 282
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K L A+ F + + +++ + G L++F +SG+ S +
Sbjct: 283 AKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLS 342
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
V ACA + G+Q+H L K + D V +++LY KC+ L A VF ++
Sbjct: 343 GVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQR 402
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +W+A+I Q + I +M G+ P + T+ VL A A ++ G +H
Sbjct: 403 DSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVH 462
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
IK G FV++TV+D Y KC ++ E+ K D + ++VSWN++I+G +
Sbjct: 463 GKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSE 522
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA + +ML G P+ +TY+ +L+ +++ IE GKQ H I+K + I S LV
Sbjct: 523 EAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLV 582
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAKCG + D+ +F+ + VSWN M+ GYA HG G EALE++ MQ+ + PN
Sbjct: 583 DMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHA 642
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL AC H+GL+++G YF M + + P+++H A +V + + A +FI+S
Sbjct: 643 TFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRS 702
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P+E + V+W+ LLS CK +D+ + AA +L DP+D+S +I+LSNVYAE+ W +
Sbjct: 703 MPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDV 762
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
++ R++M++ LKK+ GCSW E+Q++MH F + +++E++N L V + GY
Sbjct: 763 SRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSGYE 822
Query: 662 PDPIYSSHFEE 672
P + +E
Sbjct: 823 PASALFAEVDE 833
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 291/557 (52%), Gaps = 6/557 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H + +++N +L Y A LF MP+ +V+SW+AL+SG+ Q GM ++
Sbjct: 67 HRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVE 126
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + P+ T + AC D G +IH ++GLE++ + L++MYGKC
Sbjct: 127 MARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRS 186
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A F ERNS+SW + ++ Q ++ GL++F+ ++ G+ +S+ + ASV +
Sbjct: 187 LEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRS 246
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA + L Q+H+ K D+ V ++++YAK + L A R F ++ + A
Sbjct: 247 CAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQAC 306
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+A++ G + G EA+ LF M SG+ V+ S V A A+VK + G Q+H L IK
Sbjct: 307 NAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIK 366
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
GF V N +LD Y KC+ L E+ F EM++ D VSWNA+IA + Y + I
Sbjct: 367 SGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAY 426
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
L +ML G P+ +TY ++L + + ++E+G H +K G + + S +VDMY K
Sbjct: 427 LNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCK 486
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + +A+K+ D + + LVSWN+++ G++ + EA + +S M + +KP+ T+ V
Sbjct: 487 CGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATV 546
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS-VVHLFA-CRGQTRRAYEFIKSSPI 544
L C ++ +E G +I+ + ++I+S +V ++A C F K+ +
Sbjct: 547 LDTCANLATIELGKQIHGQIIKQEMLGD--EYISSTLVDMYAKCGNMPDSLLMFEKAQKL 604
Query: 545 EPNKVVWRCLLSGCKTH 561
+ V W ++ G H
Sbjct: 605 --DFVSWNAMICGYALH 619
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 165/646 (25%), Positives = 287/646 (44%), Gaps = 82/646 (12%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
++++ + A A R +G+ H RM SG + VSNCL+ MY +CG + A+ VFD
Sbjct: 5 FSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDV 64
Query: 137 SLERNSISWVSLLSSYCQCGEHVHGLKIF-------------LLS--------------- 168
R+++SW ++L++Y G+ +F LLS
Sbjct: 65 MPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLS 124
Query: 169 ---RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC 225
+ GVA + A +L AC L +L +G+QIH++ K LE D L+++Y KC
Sbjct: 125 VEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKC 184
Query: 226 EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
L+ A R F + + +W A I G Q + ++LFV+M GL S+ ++ V
Sbjct: 185 RSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVF 244
Query: 286 GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
+ A + RQLH+ IK FS+ V ++D Y+K + L ++ + F + H V
Sbjct: 245 RSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQ 304
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
+ NA++ G + + EA++L + M G ++ + S + + +++ G Q HC
Sbjct: 305 ACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLA 364
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
+K GFD +V + +A++D+Y KC L +A VF + ++ VSWN ++ Q+ + +
Sbjct: 365 IKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTI 424
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR-----DHGISPRM---- 516
+ M ++P+D T+ VL AC + +E G I+ D +S +
Sbjct: 425 AYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMY 484
Query: 517 -------------DHIA--------SVVHLFACRGQTRRAYEFIKSS---PIEPNKVVWR 552
D I S++ F+ Q+ A +F ++P+ +
Sbjct: 485 CKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYA 544
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK-----I 607
+L C + LG+ +I+ + ML + Y + + D AK +
Sbjct: 545 TVLDTCANLATIELGKQIHGQIIKQE--------MLGDEYISSTLVDMYAKCGNMPDSLL 596
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
M EK+ K D SW N M F+ +++ E M Q +V
Sbjct: 597 MFEKAQKLDF-VSW----NAMICGYALHGQGFEALEMFERMQQANV 637
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 103/250 (41%), Gaps = 33/250 (13%)
Query: 277 SEVTFS--YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+ TFS Y L A A G+ H+ ++ GF TFV+N +L Y++C +
Sbjct: 1 ATATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARG 60
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM----------LFEGHC-------- 376
FD M D VSWN ++ + + G A L M L G+C
Sbjct: 61 VFDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDS 120
Query: 377 -------------PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
P+ T + +L + + G Q H VK G + +V GSALVDM
Sbjct: 121 VGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDM 180
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y KC L DA + F + +N VSW + G Q+ LE++ MQ + + +
Sbjct: 181 YGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAY 240
Query: 484 IGVLSACVHI 493
V +C I
Sbjct: 241 ASVFRSCAAI 250
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/593 (33%), Positives = 343/593 (57%), Gaps = 11/593 (1%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
YV + C + ++IH + ++G ++ + L+N+Y KCG + +A+ VFD
Sbjct: 72 YVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELP 131
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
RN +SW +L++ Y + +++F ++G + ++ + L A + L + ++G Q
Sbjct: 132 RRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQ 191
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
IH K +EFD + L +LY+KC L+ A + F I+ ++ +W+ +I + G+
Sbjct: 192 IHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGE 251
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
A + FV+M S + P+E T + L ++ G Q+HSL IK+GF S + N+
Sbjct: 252 AATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNS 311
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH----------LASCHYG-EAIELL 367
++ Y KC + E+ K FDEM+ +V+WNA+IAGH LA+ G EA+ +
Sbjct: 312 IMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIF 371
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+ G P+L+T+S++L++ S + A+E G+Q H +K GF S+VV+G+ALV+MY KC
Sbjct: 372 LKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKC 431
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G + A K F +S + L+SW +M+ GYAQ+G ++AL ++ M+ ++PN TF+GVL
Sbjct: 432 GSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVL 491
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC H G+V+E YF M ++ I+P MDH A ++ +F G+ A++FIK +EPN
Sbjct: 492 SACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPN 551
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
+ +W L++GC++ L LG YAAE++L+ P+DT + +L N+Y A W E ++VRK+
Sbjct: 552 EFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKM 611
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
MKE+ L + SW +++K++ F + + Q +++E++ L GY
Sbjct: 612 MKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHEKAKSFGY 664
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/504 (29%), Positives = 254/504 (50%), Gaps = 23/504 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G H + L+ +Y K + A+K+FDE+P RNV+SW+ L++G+ PE+A
Sbjct: 95 IVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELA 154
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ FR M+ P YT A+SA + GK+IHG + +E ++ + N L ++
Sbjct: 155 VQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSL 214
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L A F ++N ISW +++S++ GE GL+ F+ V +EF+
Sbjct: 215 YSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTL 274
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S L C V+ +L +G QIHSL K E + + ++ LY KC + A ++F ++
Sbjct: 275 TSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMET 334
Query: 241 PDLTAWSALIGGYAQL---------GKAC--EAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
L W+A+I G+A++ C EA+ +F+K+ SG+ P TFS VL +
Sbjct: 335 ISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCS 394
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ G Q+H+ IK GF S V +++ Y+KC +E + K F EM ++SW +
Sbjct: 395 SLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTS 454
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I G+ + +A+ L +DM G PN T+ +L+ S ++ + ++K
Sbjct: 455 MITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALD-YFQMMKNE 513
Query: 410 FDSNVVIG--SALVDMYAKCGRLNDARKVFDHLSSKNLVS----WNTMLVGYAQHGLGRE 463
+ V+ + L+DM+ + GRL++A FD + +L W+ ++ G G+
Sbjct: 514 YKITPVMDHYACLIDMFVRLGRLDEA---FDFIKEMDLEPNEFIWSILIAGCRSQ--GKL 568
Query: 464 ALEIYSMMQENKIKPNDNTFIGVL 487
L Y+ Q +KP D +L
Sbjct: 569 ELGFYAAEQLLNLKPKDTETYNLL 592
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 211/440 (47%), Gaps = 45/440 (10%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
+ G + +L C + +IH+ + K D F+ L+N+YAKC ++
Sbjct: 62 REGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTME 121
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A +VF + ++ +W+ L+ GY K A+ +F +M +G P+ T L A +
Sbjct: 122 TARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASS 181
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
D+ G+Q+H IK + N++ YSKC LE ++K F + + +V+SW
Sbjct: 182 DLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTT 241
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I+ + ++ +ML E PN +T ++ L++ + +++ G Q H +K G
Sbjct: 242 VISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLG 301
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ-----------H 458
F+SN+ I ++++ +Y KCG +++A+K+FD + + +LV+WN M+ G+A+ H
Sbjct: 302 FESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAH 361
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
G EAL I+ + + +KP+ TF VLS C + +E+G I+ +S +
Sbjct: 362 QCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVG 421
Query: 519 IA------------------------------SVVHLFACRGQTRRA---YEFIKSSPIE 545
A S++ +A GQ ++A +E ++ + +
Sbjct: 422 TALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVR 481
Query: 546 PNKVVWRCLLSGCKTHKDLV 565
PNK+ + +LS C +H +V
Sbjct: 482 PNKITFVGVLSAC-SHAGMV 500
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/681 (33%), Positives = 367/681 (53%), Gaps = 25/681 (3%)
Query: 4 SGFHPNVITYNHL---------LLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQI 54
+GF P+ +T L +L +F ++D+ +VI W+ +S F Q
Sbjct: 855 TGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDD-DGSDVIVWNKALSRFLQR 913
Query: 55 GMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
G A++ F M+ + + T+V ++ A GK+IHG + RSGL+ V
Sbjct: 914 GEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVG 973
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS-------SYCQCGEHVHGLKIFLL 167
NCLINMY K G +S A+ VF E + ISW +++S C G VH L+ LL
Sbjct: 974 NCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLL 1033
Query: 168 SRKSGVAISEFSCASVLGACAVL-GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
+F+ ASVL AC+ L G + QIH+ K + D FV+ LI++Y+K
Sbjct: 1034 P-------DQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRG 1086
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
K++ A +F N DL +W+A++ GY G +A+ L++ M SG ++T
Sbjct: 1087 KMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAK 1146
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
A + G+Q+H++++K GF+ FV + VLD Y KC +E + + F E+ D V+
Sbjct: 1147 AAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVA 1206
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
W +I+G + + A+ M P+ YT++ ++ S + A+E G+Q H IV
Sbjct: 1207 WTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIV 1266
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
K + + ++LVDMYAKCG + DAR +F +++ + SWN M+VG AQHG +EAL+
Sbjct: 1267 KLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQ 1326
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
+ M+ + P+ TFIGVLSAC H GLV E + F SM +++GI P ++H + +V
Sbjct: 1327 FFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDAL 1386
Query: 527 ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI 586
+ G+ A + I S P E + ++R LL+ C+ D G+ AEK+L+ +P D++A++
Sbjct: 1387 SRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYV 1446
Query: 587 MLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHE 646
+LSNVYA AN W+ A R +M++ ++KKD G SW +L+NK+H F + + ++
Sbjct: 1447 LLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYN 1506
Query: 647 VMNQLSVHLFDGGYVPDPIYS 667
+ + + + GYVPD ++
Sbjct: 1507 KVEYIMKRIREEGYVPDTDFA 1527
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 238/465 (51%), Gaps = 2/465 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG V N L+ MYVK ++ A+ +F +M E ++ISW+ +ISG + G+ E +
Sbjct: 961 VMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECS 1020
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACAS-RGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ F ++ L P+ +T + AC+S G +IH ++G+ L+S VS LI+
Sbjct: 1021 VGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALID 1080
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y K G + A+F+F + SW +++ Y G+ L++++L ++SG + +
Sbjct: 1081 VYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQIT 1140
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ A L LK G QIH++V K D FV G++++Y KC +++ A RVFS I
Sbjct: 1141 LVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP 1200
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PD AW+ +I G + G+ A+ + +M S + P E TF+ ++ A + + GRQ
Sbjct: 1201 SPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQ 1260
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ I+K+ + FV +++D Y+KC +E++ F + + SWNA+I G +
Sbjct: 1261 IHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGN 1320
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
EA++ K M G P+ T+ +L+ S + + + K G + + S
Sbjct: 1321 AKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYS 1380
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGRE 463
LVD ++ GR+ +A KV + + S L+ + + RE
Sbjct: 1381 CLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRE 1425
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 140/570 (24%), Positives = 267/570 (46%), Gaps = 49/570 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFS-QIGMP 57
++TSG HP+ N+L+ MY K ++ A+KLFD P+ R++++W+A++S +
Sbjct: 682 ILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKS 741
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
+ FRL+ V+ +T C + + +HG + GL+ + V+ L
Sbjct: 742 HDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGAL 801
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+N+Y K GL+ A+ +FD R+ + W ++ +Y + +F ++G +
Sbjct: 802 VNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDD 861
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCA---LEFDKFVAMGLINLYAKCEKLDLASRV 234
V ++ S V KC LE +F A A+++
Sbjct: 862 -----------------VTLRTLSRVVKCKKNILELKQFKA--------------YATKL 890
Query: 235 FS-NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
F + D+ W+ + + Q G+A EA+D FV M +S + +TF +L A +
Sbjct: 891 FMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNC 950
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+Q+H ++++ G V N +++ Y K + + F +M+E D++SWN +I+G
Sbjct: 951 LELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISG 1010
Query: 354 ----HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW-GKQTHCCIVKP 408
L C G + LL+D L P+ +T +++L S + + Q H C +K
Sbjct: 1011 CTLSGLEECSVGMFVHLLRDSLL----PDQFTVASVLRACSSLEGGYYLATQIHACAMKA 1066
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
G + + +AL+D+Y+K G++ +A +F + +L SWN ++ GY G +AL +Y
Sbjct: 1067 GVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLY 1126
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
+MQE+ + + T + A + +++G ++++ G + + + V+ ++
Sbjct: 1127 ILMQESGERSDQITLVNAAKAAGGLVGLKQG-KQIHAVVVKRGFNLDLFVTSGVLDMYLK 1185
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
G+ A P P+ V W ++SGC
Sbjct: 1186 CGEMESARRVFSEIP-SPDDVAWTTMISGC 1214
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 196/416 (47%), Gaps = 34/416 (8%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE--RNSISWVSLLSSY 152
GK H R+ SG + V+N LI MY KCG LSSA+ +FD + + R+ ++W ++LS+
Sbjct: 675 GKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSAL 734
Query: 153 CQCGEHVH-GLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
+ H G +F L R+S V+ + + A V C + + +H K L++D
Sbjct: 735 AAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWD 794
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
FVA L+N+YAK + A +F + + D+ W+ ++ Y EA+ LF +
Sbjct: 795 VFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHR 854
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
+G P +VT + K + +Q + K
Sbjct: 855 TGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATK------------------------- 889
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
L +D+ D DV+ WN ++ L EA++ DM+ + T+ +L + +
Sbjct: 890 -LFMYDD-DGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAG 947
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ +E GKQ H +++ G D V +G+ L++MY K G ++ AR VF ++ +L+SWNTM
Sbjct: 948 LNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTM 1007
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
+ G GL ++ ++ + + + P+ T VL AC + EG +Y + I
Sbjct: 1008 ISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSL----EGGYYLATQI 1059
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 158/391 (40%), Gaps = 50/391 (12%)
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
C S+L +L +G + H+ + D+FV LI +YAKC L A ++F
Sbjct: 659 CFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTP 718
Query: 240 LP--DLTAWSALIGGYA-QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
DL W+A++ A K+ + LF + S + + T + V
Sbjct: 719 DTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSA 778
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
LH +K+G FVA +++ Y+K L+ E+ FD M DVV WN ++ ++
Sbjct: 779 SESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVD 838
Query: 357 SCHYGEAIELLKDMLFEGHCPN---LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+C EA+ L + G P+ L T S ++ +I + KQ K
Sbjct: 839 TCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILEL---KQFKAYATK------ 889
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ MY G +++ WN L + Q G EA++ + M
Sbjct: 890 -------LFMYDDDG--------------SDVIVWNKALSRFLQRGEAWEAVDCFVDMIN 928
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR--MDHIASV----VHLFA 527
+++ + TF+ +L+ + +E G HGI R +D + SV ++++
Sbjct: 929 SRVACDGLTFVVMLTVVAGLNCLELGKQI-------HGIVMRSGLDQVVSVGNCLINMYV 981
Query: 528 CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
G RA E + + W ++SGC
Sbjct: 982 KAGSVSRARSVFGQMN-EVDLISWNTMISGC 1011
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/721 (30%), Positives = 369/721 (51%), Gaps = 68/721 (9%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPER--NVISWSALISGFSQIGMPEVALNYF 64
H N+ T+N ++ V SR++DA+KLFDEMP R + +SW+ +ISG+SQ G + F
Sbjct: 71 HRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETF 130
Query: 65 RLMVCCVLE--PNY--YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
LM+ + NY +++ + AC S GD+R ++H + + G + + + N ++ M
Sbjct: 131 SLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGM 190
Query: 121 YGKCGLLSSAQFVF-------------------------------DASLERNSISWVSLL 149
Y KCG + A+ VF + ER+ +SW +L+
Sbjct: 191 YVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLI 250
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
S + Q G V L +F+ G + + + SVL ACA +LK G +H+ + +
Sbjct: 251 SIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHS 310
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
D GLI++YAKC LDLA RVF +++ D +W++LI G G +A+ LF +M
Sbjct: 311 LDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQM 370
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
S ++ E +LG + G LH IK G S V N ++ Y+KC
Sbjct: 371 RRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDT 430
Query: 330 EES--------LKT-----------------------FDEMDEHDVVSWNALIAGHLASC 358
+++ L+ FD M E ++V+WN++++ ++ +
Sbjct: 431 DKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNG 490
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
E ++L M G P+ T++ + +D+ ++ G Q K G NV + +
Sbjct: 491 FSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVAN 550
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
++V MY++CG + +A+ FD + K+L+SWN ML +AQ+GLG + ++ + M + + KP
Sbjct: 551 SIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKP 610
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N +++ VLS C H+GLV EG HYF+SM R GISP +H + +V L G +A +
Sbjct: 611 NHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDL 670
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I+ P +PN VW LL C+ H DL L AA+K++ D E + +++LSN+Y+E+
Sbjct: 671 IEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGEL 730
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
D A +RK+MK K ++ GCSW E+ N++H F+ + Q +++ + ++ + D
Sbjct: 731 DNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDT 790
Query: 659 G 659
G
Sbjct: 791 G 791
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 144/565 (25%), Positives = 246/565 (43%), Gaps = 107/565 (18%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERN------------- 141
+++H ++ SGL+ + + N L++MY CGL A VF + RN
Sbjct: 27 ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86
Query: 142 --------------------SISWVSLLSSYCQCGEHVHGLKIFLL----SRKSGVAISE 177
S+SW +++S Y Q G H + F L + G
Sbjct: 87 SSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP 146
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
FS SV+ AC LG+ ++ +Q+H+LV K + + ++ +Y KC +DLA VF +
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206
Query: 238 IQLPDLTAWSALIGGYAQL-------------------------------GKACEAIDLF 266
I+ P L W+++I GY+Q+ G + + +F
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMF 266
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
V+M + G P+ +T+ VL A A + G LH+ I++M S N ++D Y+KC
Sbjct: 267 VEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKC 326
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---EAIELLKDMLFEGHCPNLYTYS 383
L+ + + F + EHD +SWN+LI G + H+G +A+ L M + +
Sbjct: 327 GCLDLAKRVFKSLREHDHISWNSLITGVV---HFGLGEDALILFNQMRRSSVVLDEFILP 383
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC---------------- 427
IL + S G+ H +K G S+ +G+A++ MYAKC
Sbjct: 384 TILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR 443
Query: 428 ---------------GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
G + AR FD + +N+V+WN+ML Y Q+G E L++Y M+
Sbjct: 444 NTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMR 503
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
N ++P+ TF + AC + +V+ G + G+S + S+V +++ G
Sbjct: 504 SNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATK-FGLSLNVSVANSIVTMYSRCGLI 562
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSG 557
+ A S + + + W +L+
Sbjct: 563 KEAKNTFDSID-DKDLISWNAMLAA 586
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG------ 55
I SG + N ++ MY K + A +F MP RN ISW+A+I+ FS+ G
Sbjct: 406 IKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKAR 465
Query: 56 -----MPEV--------------------ALNYFRLMVCCVLEPNYYTYVGAVSACASRG 90
MPE L + M ++P++ T+ ++ ACA
Sbjct: 466 GYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLA 525
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
+ G ++ + GL LN V+N ++ MY +CGL+ A+ FD+ +++ ISW ++L+
Sbjct: 526 IVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLA 585
Query: 151 SYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH---SLVFKCA 207
++ Q G + + F K+ + S SVL C+ +G + G + VF +
Sbjct: 586 AFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGIS 645
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALIG 251
+ F M ++L + L+ A + + P+ T WSAL+G
Sbjct: 646 PTNEHFSCM--VDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLG 688
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 6/162 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G NV N ++ MY + I +A+ FD + ++++ISW+A+++ F+Q G+ ++ F
Sbjct: 541 GLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTF 600
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINMYGK 123
M+ +PN+ +YV +S C+ G GK M R G+ + +C++++ G+
Sbjct: 601 EDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGR 660
Query: 124 CGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHGLKI 164
GLL A+ + + + N+ W +LL S C H H L++
Sbjct: 661 AGLLEQAKDLIEGMPFKPNATVWSALLGS---CRVH-HDLRL 698
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/670 (32%), Positives = 364/670 (54%), Gaps = 3/670 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEVA 60
I G+ V N ++ MY K + +N A++LFD MPE+ +V+SW+++IS +S G A
Sbjct: 243 IKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEA 302
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M L PN YT+V A+ AC + G IH + +S +N V+N LI M
Sbjct: 303 LRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAM 362
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G + A +F + ++ISW S+LS + Q G + L+ + R +G +
Sbjct: 363 YARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAV 422
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S++ A A GN GMQIH+ K L+ D V L+++YAK + +F +
Sbjct: 423 ISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPD 482
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+ +I G+AQ G A++LF ++ G+ + S +L A + +K +++
Sbjct: 483 KDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEI 542
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS II+ G S + N ++D Y +C ++ + + F+ ++ DVVSW ++I+ ++ +
Sbjct: 543 HSYIIRKGLSDLV-LQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLA 601
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+EL M G P+ + +IL+ ++ + A++ GK+ H +++ GF + S L
Sbjct: 602 NEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTL 661
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYA+CG L +R VF+ + +K+LV W +M+ Y HG GR A++++ M++ I P+
Sbjct: 662 VDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDH 721
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
F+ VL AC H GL+ EG + SM ++ + P +H +V L AY+F+K
Sbjct: 722 IAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVK 781
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+EP VW LL C+ H + LG AA+K+L DPE+ ++++SNVYA W +
Sbjct: 782 GMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKD 841
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF-DGG 659
+VR MK LKK+ GCSW E+ NK+H F + Q +++ ++Q++ L +GG
Sbjct: 842 VEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGG 901
Query: 660 YVPDPIYSSH 669
YV + H
Sbjct: 902 YVAQTKFVLH 911
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 168/566 (29%), Positives = 305/566 (53%), Gaps = 11/566 (1%)
Query: 1 MITS-GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV 59
MITS +V L+ MY K + DA+KLFD MP + + +W+A+I + G P
Sbjct: 140 MITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLG 199
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+L +R M + + T+ + AC D R G E+HG + G V+N ++
Sbjct: 200 SLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVG 259
Query: 120 MYGKCGLLSSAQFVFDASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY KC L+ A+ +FD E+ + +SW S++S+Y G+ + L++F +K+ +A + +
Sbjct: 260 MYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTY 319
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ + L AC +K GM IH+ V K + + FVA LI +YA+ K+ A+ +F N+
Sbjct: 320 TFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNM 379
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D +W++++ G+ Q G EA+ + +M +G P V ++ A A T+ G
Sbjct: 380 DDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGM 439
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+ +K G S V N+++D Y+K ++ FD+M + DVVSW +IAGH +
Sbjct: 440 QIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNG 499
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ A+EL +++ EG ++ S+IL S + I K+ H I++ G S++V+ +
Sbjct: 500 SHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQN 558
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+VD+Y +CG ++ A ++F+ + K++VSW +M+ Y +GL EALE++ +M+E ++P
Sbjct: 559 GIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEP 618
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG---QTRRA 535
+ + + +LSA + +++G +IR G +++V ++A G ++R
Sbjct: 619 DSISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGSLASTLVDMYARCGTLEKSRNV 677
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ FI++ + V+W +++ H
Sbjct: 678 FNFIRNKDL----VLWTSMINAYGMH 699
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 220/421 (52%), Gaps = 2/421 (0%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLINMYGKCGLLSSAQFVFDA 136
Y + C S+ G+++H M S NS +S L+ MYGKCG L A+ +FD
Sbjct: 116 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 175
Query: 137 SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
+ +W +++ +Y GE + L+++ R SG+ + + +L AC +L + + G
Sbjct: 176 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCG 235
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-QLPDLTAWSALIGGYAQ 255
++H L K FVA ++ +Y KC L+ A ++F + + D+ +W+++I Y+
Sbjct: 236 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 295
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G++ EA+ LF +M + L P+ TF L A D G +H+ ++K + FV
Sbjct: 296 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 355
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
AN ++ Y++ + E+ F MD+ D +SWN++++G + + Y EA++ +M G
Sbjct: 356 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 415
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+L +I+ S+ G Q H +K G DS++ +G++LVDMYAK +
Sbjct: 416 KPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC 475
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+FD + K++VSW T++ G+AQ+G ALE++ +Q I + +L AC + L
Sbjct: 476 IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKL 535
Query: 496 V 496
+
Sbjct: 536 I 536
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 208/386 (53%), Gaps = 1/386 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S ++ NV N L+ MY +F ++ +A +F M + + ISW++++SGF Q G+ A
Sbjct: 344 VLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEA 403
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L ++ M +P+ + ++A A G+ +G +IH ++GL+ + V N L++M
Sbjct: 404 LQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDM 463
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K + +FD +++ +SW ++++ + Q G H L++F + G+ +
Sbjct: 464 YAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMI 523
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L AC+ L + +IHS + + L D + G++++Y +C +D A+R+F I+
Sbjct: 524 SSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEF 582
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+++I Y G A EA++LF M +G+ P ++ +L A A + G+++
Sbjct: 583 KDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEI 642
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +I+ GF +A+T++D Y++C LE+S F+ + D+V W ++I +
Sbjct: 643 HGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCG 702
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNIL 386
AI+L + M E P+ + +L
Sbjct: 703 RAAIDLFRRMEDESIAPDHIAFVAVL 728
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/669 (32%), Positives = 361/669 (53%), Gaps = 4/669 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF ++ + L+ MY K +DA+++FD + ++N+I W+A++ +SQ G +
Sbjct: 244 IKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVM 303
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M+ C + P+ +TY +S CA G+++H + + N V+N LI+MY
Sbjct: 304 ELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMY 363
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G L A F+ R+ ISW +++ Y Q +F G+ E S A
Sbjct: 364 AKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLA 423
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L AC + L+ G Q H L K LE + F LI++Y+KC + A + +S++
Sbjct: 424 SILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPER 483
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ + +ALI GYA L E+I+L +M GL PSE+TF+ ++ + I G Q+H
Sbjct: 484 SVVSVNALIAGYA-LKNTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIH 542
Query: 302 SLIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSWNALIAGHLASCH 359
I+K G F+ ++L Y + L ++ F E +V W ALI+GH+ +
Sbjct: 543 CAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNEC 602
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
A+ L ++M P+ T+ +L + + ++ G++ H I GFD + + SA
Sbjct: 603 SDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSA 662
Query: 420 LVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
LVDMYAKCG + + +VF+ L++K +++SWN+M+VG+A++G + AL+++ M ++ I P
Sbjct: 663 LVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITP 722
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+D TF+GVL+AC H G V EG F+ M+ +GI PR+DH A +V L G + A EF
Sbjct: 723 DDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEF 782
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I +EPN ++W LL C+ H D G+ AA+K++ +P+ +S +++LSN+YA + W
Sbjct: 783 IDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNW 842
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
DE +R+ M +K ++K GCSW + + + F + ++ + + L+ + D
Sbjct: 843 DEARSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAGDISHSSYDEISKALKHLTALIKDN 902
Query: 659 GYVPDPIYS 667
D + S
Sbjct: 903 NRFQDIVIS 911
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 175/554 (31%), Positives = 296/554 (53%), Gaps = 6/554 (1%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPEVALNYFR 65
P+ + +L Y+ +++DA +LF +MP RNV++W+ +ISG ++ E AL +F
Sbjct: 147 PDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFH 206
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M ++ + T +SA AS G +H + G E + +V++ LINMYGKC
Sbjct: 207 QMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQ 266
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ A+ VFDA ++N I W ++L Y Q G + +++FL G+ EF+ S+L
Sbjct: 267 MPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILS 326
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
CA L+VG Q+HS + K + FV LI++YAK L A + F ++ D +
Sbjct: 327 TCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHIS 386
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+A+I GY Q A LF +M G++P EV+ + +L A ++K G+Q H L +
Sbjct: 387 WNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSV 446
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K+G + F ++++D YSKC ++++ KT+ M E VVS NALIAG+ A + E+I
Sbjct: 447 KLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGY-ALKNTKESIN 505
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD-SNVVIGSALVDMY 424
LL +M G P+ T+++++++ + G Q HC IVK G + +G++L+ MY
Sbjct: 506 LLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMY 565
Query: 425 AKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
RL DA +F SS K++V W ++ G+ Q+ AL +Y M++N I P+ TF
Sbjct: 566 MDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATF 625
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ VL AC + + +G +S+I G +++V ++A G + + + +
Sbjct: 626 VTVLQACALLSSLHDG-REIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELA 684
Query: 544 IEPNKVVWRCLLSG 557
+ + + W ++ G
Sbjct: 685 TKKDVISWNSMIVG 698
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 251/488 (51%), Gaps = 42/488 (8%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ +T+ +SACA + G+ +H + +SGLE S LI++Y KC L+ A+ +
Sbjct: 45 PDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTI 104
Query: 134 FDAS--LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
F ++ +++SW +L+S Y Q G L IF R S V
Sbjct: 105 FASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVP----------------- 147
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP--DLTAWSAL 249
D+ + ++N Y KLD A ++F + +P ++ AW+ +
Sbjct: 148 -------------------DQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVM 188
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I G+A+ EA+ F +M G+ S T + VL A A + G +H+ IK GF
Sbjct: 189 ISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGF 248
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
S +VA+++++ Y KC++ +++ + FD + + +++ WNA++ + + +EL D
Sbjct: 249 ESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLD 308
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M+ G P+ +TY++IL+ + +E G+Q H I+K F SN+ + +AL+DMYAK G
Sbjct: 309 MISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGA 368
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L +A K F+H++ ++ +SWN ++VGY Q + A ++ M + I P++ + +LSA
Sbjct: 369 LKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSA 428
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C +I ++E G F+ + G+ + +S++ +++ G + A++ S P E + V
Sbjct: 429 CGNIKVLEAG-QQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMP-ERSVV 486
Query: 550 VWRCLLSG 557
L++G
Sbjct: 487 SVNALIAG 494
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 232/469 (49%), Gaps = 16/469 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I F N+ N L+ MY K + +A K F+ M R+ ISW+A+I G+ Q + A
Sbjct: 344 IIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGA 403
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ FR M+ + P+ + +SAC + +G++ H + GLE N + LI+M
Sbjct: 404 FSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDM 463
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYC-----QCGEHVHGLKIFLLSRKSGVAI 175
Y KCG + A + + ER+ +S +L++ Y + +H ++I G+
Sbjct: 464 YSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTKESINLLHEMQIL------GLKP 517
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF-DKFVAMGLINLYAKCEKLDLASRV 234
SE + AS++ C + +G+QIH + K L +F+ L+ +Y ++L A+ +
Sbjct: 518 SEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANIL 577
Query: 235 FSNI-QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
FS L + W+ALI G+ Q + A++L+ +M + + P + TF VL A A +
Sbjct: 578 FSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSS 637
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIA 352
GR++HSLI GF ++ ++D Y+KC ++ S++ F+E+ + DV+SWN++I
Sbjct: 638 LHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIV 697
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-PGFD 411
G + + A+++ +M P+ T+ +L S + G+Q +V G +
Sbjct: 698 GFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIE 757
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
V + +VD+ + G L +A + D L N + W +L HG
Sbjct: 758 PRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHG 806
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 174/342 (50%), Gaps = 40/342 (11%)
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDL 230
SG + +F+ A L ACA L NL +G +HS V K LE F LI+LYAKC L
Sbjct: 41 SGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTC 100
Query: 231 ASRVFSNIQLPDL--TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
A +F++ P L +W+ALI GY Q G EA+ +F KM +S + P +V VL A+
Sbjct: 101 ARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQVALVTVLNAY 159
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM--DEHDVVS 346
I +G L+++ + F +M +VV+
Sbjct: 160 ----------------ISLG-------------------KLDDACQLFQQMPIPIRNVVA 184
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
WN +I+GH + HY EA+ M G + T +++L+ + + A+ G H +
Sbjct: 185 WNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAI 244
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
K GF+S++ + S+L++MY KC +DAR+VFD +S KN++ WN ML Y+Q+G +E
Sbjct: 245 KQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVME 304
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
++ M I P++ T+ +LS C +E G +++I+
Sbjct: 305 LFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIK 346
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/637 (32%), Positives = 346/637 (54%), Gaps = 4/637 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG-MPEVALNYFRLMVCCVL 72
N L M+V+F + DA +F +M ERN+ SW+ L+ G+++ G E Y R++ +
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGV 192
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+P+ YT+ + C D G+E+H + R G EL+ V N LI MY KCG + SA+
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
+FD R+ ISW +++S Y + G GLK+F R V + SV+ AC +LG+
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
++G IH+ V D V L +Y A ++FS + D+ +W+ +I G
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISG 372
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y +AID + M + P E+T + VL A A + + G +LH L IK S+
Sbjct: 373 YEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
VAN +++ YSKC+ ++++L F + +V+SW ++IAG + EA+ + M
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKM 492
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
PN T + L + I A+ GK+ H +++ G + + +AL+DMY +CGR+N
Sbjct: 493 TLQ-PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNI 551
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A F+ K++ SWN +L GY++ G G +E++ M + +++P++ TFI +L C
Sbjct: 552 AWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGK 610
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
+V +G YF+ M ++G++P + H A VV L G+ + A++FI+ P+ P+ VW
Sbjct: 611 SQMVRQGLMYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWG 669
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL+ C+ H ++ LG +A++I D +I+L N+YA+ W E AKVR++MKE
Sbjct: 670 ALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENG 729
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMN 649
L D GCSW E++ K+H F + Q +++ V++
Sbjct: 730 LTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLD 766
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/536 (26%), Positives = 246/536 (45%), Gaps = 37/536 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ ++ N L+ MYVK + A+ LFD MP R++ISW+A+ISG+ + GM
Sbjct: 222 VVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEG 281
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M ++P+ T +SAC GD R G++IH + +G ++ V N L M
Sbjct: 282 LKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQM 341
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G A+ +F ++ +SW +++S Y + + + + V E +
Sbjct: 342 YLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITV 401
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+VL ACA LG+L G+++H L K L VA LIN+Y+KC+ +D A +F NI
Sbjct: 402 AAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPR 461
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+++I G + EA+ +F + L P+ +T + L A A + + G+++
Sbjct: 462 KNVISWTSIIAGLRLNNRCFEAL-IFFRQMKMTLQPNAITLTAALAACARIGALMCGKEI 520
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +++ G F+ N +LD Y +C + + F+ + DV SWN L+ G+
Sbjct: 521 HAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSERGQG 579
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+EL M+ P+ T+ ++L + G + + G N+ + +
Sbjct: 580 SVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACV 639
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML--------------------------V 453
VD+ + G L +A K + + + W +L V
Sbjct: 640 VDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSV 699
Query: 454 G--------YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
G YA G RE ++ MM+EN + + + VH L ++ +H
Sbjct: 700 GYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYH 755
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 191/403 (47%), Gaps = 2/403 (0%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
+V V C + G +++ S L+ + N + M+ + G L A +VF
Sbjct: 96 VFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKM 155
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
ERN SW L+ Y + G + ++ + GV ++ VL C + +L G
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
++H V + E D V LI +Y KC + A +F + D+ +W+A+I GY +
Sbjct: 216 REVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
G E + LF M + P +T + V+ A + + GR +H+ +I GF+ V
Sbjct: 276 GMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
N++ Y E+ K F MD D+VSW +I+G+ + +AI+ + M +
Sbjct: 336 NSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVK 395
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ T + +L+ + + ++ G + H +K S V++ + L++MY+KC ++ A +
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
F ++ KN++SW +++ G + EAL + M+ ++PN
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPN 497
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 175/352 (49%), Gaps = 1/352 (0%)
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
L C G+ +K+ ++ VA+ E +++ C + G +++S+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+ + ++ + L A VF + +L +W+ L+GGYA+ G EAI L+ +
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185
Query: 269 M-FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
M + G+ P TF VL + + GR++H +++ G+ V N ++ Y KC
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
++ + FD M D++SWNA+I+G+ + E ++L M P+L T +++++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVIS 305
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ G+ H ++ GF ++ + ++L MY G +A K+F + K++VS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVS 365
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
W TM+ GY + L +A++ Y MM ++ +KP++ T VLSAC +G ++ G
Sbjct: 366 WTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 53/289 (18%)
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMM 471
+V +G+A + M+ + G L DA VF +S +NL SWN ++ GYA+ G EA+ +Y M+
Sbjct: 128 SVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRML 187
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
+KP+ TF VL C I + G ++R +G +D + +++ ++ G
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVR-YGYELDIDVVNALITMYVKCGD 246
Query: 532 TRRAYEFIKSSP----------------------------------IEPNKVVWRCLLSG 557
+ A P ++P+ + ++S
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISA 306
Query: 558 CKTHKDLVLGRYAAEKILSTD-PEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
C+ D LGR +++T D S L+ +Y A W E K+ M K +
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDI--- 363
Query: 617 TGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPI 665
SWT + + Y F + ID + +M+Q SV PD I
Sbjct: 364 --VSWTTMISGYEY----NFLPEKAIDTYRMMDQDSVK-------PDEI 399
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/658 (31%), Positives = 356/658 (54%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF +V + L+ Y + I+DA+ LFD MP ++ + W+ +++G+ + G + A F
Sbjct: 177 GFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVF 236
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M PN T+ +S CAS G ++HG + SGLE++S V+N L+ MY KC
Sbjct: 237 MEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKC 296
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L A+ +FD + + ++W ++S Y Q G +F + + + +S L
Sbjct: 297 GHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFL 356
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+ L+ G +IH + + + D F+ LI++Y KC +++A ++F D+
Sbjct: 357 PLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIV 416
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+A+I GY G A+++F + + + VT + VL A A + G++LH I
Sbjct: 417 VCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHI 476
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K G +V + ++D Y+KC L+ + +TF + + D V WN++I + EAI
Sbjct: 477 LKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAI 536
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L + M G + + S L+ +++PA+ +GK+ H +++ F S++ SAL+DMY
Sbjct: 537 DLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMY 596
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+KCG L+ A +VFD + KN VSWN+++ Y HG +++L ++ M + I+P+ TF+
Sbjct: 597 SKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFL 656
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
++SAC H G V+EG HYF M + GI RM+H A +V LF G+ A+ I S P
Sbjct: 657 AIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPF 716
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
P+ VW LL C+ H ++ L A+ + DP+++ +++LSNV+A A W+ K+
Sbjct: 717 SPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKI 776
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
R +MKE+ ++K GCSW ++ N H F + + Q ++ ++ L + L GYVP
Sbjct: 777 RSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVP 834
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/566 (29%), Positives = 285/566 (50%), Gaps = 6/566 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ +G N I LL MYV DA+ +F ++ W+ +I GF+ +G + A
Sbjct: 72 MLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFA 131
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L ++ M+ C P+ YT+ + AC G+ +H ++ G EL+ V + LI
Sbjct: 132 LLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKF 191
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G + A+++FD ++ + W +L+ Y + G+ + +F+ R++ + +
Sbjct: 192 YSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTF 251
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A VL CA + G Q+H LV LE D VA L+ +YAKC L A R+F +
Sbjct: 252 ACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPK 311
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL W+ +I GY Q G EA LF +M S+ + P +TFS L ++ G+++
Sbjct: 312 TDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEI 371
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H II+ G S F+ + ++D Y KC +E + K FD+ D+V A+I+G++ +
Sbjct: 372 HCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMN 431
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A+E+ + +L E N T +++L + + A+ GK+ H I+K G + +GSA+
Sbjct: 432 NNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAI 491
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMYAKCGRL+ A + F +S K+ V WN+M+ +Q+G EA++++ M K +
Sbjct: 492 MDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDC 551
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA--SVVHLFACRGQTRRAYEF 538
+ LSAC ++ + G M+R + R D A +++ +++ G A
Sbjct: 552 VSISAALSACANLPALHYGKEIHAFMMRG---AFRSDLFAESALIDMYSKCGNLDLACRV 608
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDL 564
+ E N+V W +++ H L
Sbjct: 609 FDTME-EKNEVSWNSIIAAYGNHGRL 633
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 244/461 (52%), Gaps = 2/461 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+++SG + N LL MY K + DA++LFD MP+ ++++W+ +ISG+ Q G + A
Sbjct: 274 VVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEA 333
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M+ ++P+ T+ + + R GKEIH + R+G+ L+ + + LI++
Sbjct: 334 SCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDI 393
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + A+ +FD + + +++S Y G + + L+IF + + + +
Sbjct: 394 YFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTL 453
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASVL ACA L L +G ++H + K +V ++++YAKC +LDLA + F I
Sbjct: 454 ASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISD 513
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+++I +Q GK EAIDLF +M +G V+ S L A A++ G+++
Sbjct: 514 KDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEI 573
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +++ F S F + ++D YSKC L+ + + FD M+E + VSWN++IA +
Sbjct: 574 HAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRL 633
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
+++ L ML +G P+ T+ I++ ++ G C+ + G + + +
Sbjct: 634 KDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYAC 693
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+VD++ + GRLN+A + + + S + W T+L HG
Sbjct: 694 MVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHG 734
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 234/481 (48%), Gaps = 6/481 (1%)
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
V + C G++ H +M +G+ N + L+ MY CG A+ +F
Sbjct: 50 VSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRL 109
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQI 199
S W ++ + G+ L + G +++ V+ AC L ++ +G +
Sbjct: 110 WCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVV 169
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
H + E D FV LI Y++ + A +F + D W+ ++ GY + G
Sbjct: 170 HDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDW 229
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
A +F++M + P+ VTF+ VL A G QLH L++ G + VANT+
Sbjct: 230 DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTL 289
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
L Y+KC L ++ + FD M + D+V+WN +I+G++ + EA L +M+ P+
Sbjct: 290 LAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDS 349
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
T+S+ L + S+ + GK+ HC I++ G +V + SAL+D+Y KC + ARK+FD
Sbjct: 350 ITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQ 409
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ ++V M+ GY +G+ ALEI+ + + +++ N T VL AC + + G
Sbjct: 410 RTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLG 469
Query: 500 WHYFNSMIRD-HGISPRMDHIASVVHLFACRGQTRRAYE-FIKSSPIEPNKVVWRCLLSG 557
++++ HG S + ++++ ++A G+ A++ FI S + + V W +++
Sbjct: 470 KELHGHILKNGHGGSCYVG--SAIMDMYAKCGRLDLAHQTFIGIS--DKDAVCWNSMITS 525
Query: 558 C 558
C
Sbjct: 526 C 526
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/692 (30%), Positives = 374/692 (54%), Gaps = 40/692 (5%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
NV ++N ++ Y R+++A++LFD+MPERN +SW +ISG+ I A + F M
Sbjct: 294 NVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMC 353
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
V P+ +V +SA D + ++G E + V + ++N Y + G L
Sbjct: 354 RTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLD 413
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A F+ ERN SW ++++++ QCG ++++ + VA +++ A A
Sbjct: 414 LAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATK----TAMMTAYA 469
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+G + Q L+F L + +I Y + L A +F + + + +W+A
Sbjct: 470 QVGRI----QKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAA 525
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I G+ Q ++ EA++L +++ SG +PS+ +F+ L A A++ + GR +HSL IK G
Sbjct: 526 MIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTG 585
Query: 309 FSSFTFVANTVLDFYSKCE-------------------------------LLEESLKTFD 337
++V N ++ Y+KC +L+++ F+
Sbjct: 586 CQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFE 645
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
+M + DVVSW A+I+ ++ + H A++L DML G PN T +++L+ ++ AI+
Sbjct: 646 KMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKL 705
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
G+Q H I K GFD+ + +G++L+ MY KCG D VF+ + +L++WN +LVG AQ
Sbjct: 706 GEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQ 764
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
+GLG+EA++I+ M+ I P+ +F+GVL AC H GLV+EGW +FNSM + +GI P +
Sbjct: 765 NGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVY 824
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILST 577
H +V L G A I++ P++P+ V+W LL C+ H+++ LG+ AE++
Sbjct: 825 HYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQM 884
Query: 578 DPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFA 637
++ +++LSN++A MWD+ A++RK+MK++ L K+ G SW +++NK+H F T
Sbjct: 885 TKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRT 944
Query: 638 QFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
Q +++ + + GY+PD + H
Sbjct: 945 HDQIEEIYSALKEYYGCFRATGYMPDTNFVLH 976
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/581 (26%), Positives = 274/581 (47%), Gaps = 54/581 (9%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +G+ +V+ + +L Y + ++ A F+ MPERN SW+ +I+ F+Q G + A+
Sbjct: 388 IKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAI 447
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ V E T ++A A G + + I + L N N +I Y
Sbjct: 448 QLYER----VPEQTVATKTAMMTAYAQVGRIQKARLIFDEI----LNPNVVAWNAIIAGY 499
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+ G+L A+ +F +NS SW ++++ + Q E L++ + +SG S+ S
Sbjct: 500 TQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFT 559
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S L ACA +G++++G IHSL K +F+ +V GLI++YAKC ++ S VF I++
Sbjct: 560 SALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVK 619
Query: 242 DLTAWSALIGG-------------------------------YAQLGKACEAIDLFVKMF 270
D +W++LI G Y Q G A+DLF+ M
Sbjct: 620 DTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDML 679
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
+ G+ P+++T + +L A ++ G Q H+LI K+GF +F FV N+++ Y KC E
Sbjct: 680 ARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YE 738
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
+ F+EM EHD+++WNA++ G + EAI++ + M EG P+ ++ +L S
Sbjct: 739 DGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACS 798
Query: 391 DIPAIEWG-KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSW 448
++ G + K G V + +VD+ + G L++A + +++ K + V W
Sbjct: 799 HAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIW 858
Query: 449 NTMLVGYAQHG---LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
+L H LG+ E M KP T++ + + G+ ++
Sbjct: 859 EALLGACRIHRNVELGQRVAERLFQM----TKPKSATYVLLSNLFASQGMWDKVAE-IRK 913
Query: 506 MIRDHGISPRMD----HIASVVHLFACRGQTRRAYEFIKSS 542
+++D G++ + + +H F +T E I S+
Sbjct: 914 LMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSA 954
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 145/582 (24%), Positives = 273/582 (46%), Gaps = 52/582 (8%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V+++N ++ Y + ++++A+ LFD +N+ +W+ L++G+++ G E A F M
Sbjct: 201 DVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMT 260
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
E N ++ +S GD ++ +++ M E N N ++ Y C +S
Sbjct: 261 ----ERNVVSWNAMISGYVQNGDLKNARKLFDEM----PEKNVASWNSVVTGYCHCYRMS 312
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ +FD ERNS+SW+ ++S Y ++ +F+ ++ + VL A
Sbjct: 313 EARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAIT 372
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L +L++ + + K E D V ++N Y + LDLA F + + +W+
Sbjct: 373 GLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTT 432
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I +AQ G+ +AI L+ ++ + T + ++ A+A V G Q LI
Sbjct: 433 MIAAFAQCGRLDDAIQLYERVPEQTV----ATKTAMMTAYAQV----GRIQKARLIFDEI 484
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
+ N ++ Y++ +L+E+ F +M + SW A+IAG + + EA+ELL
Sbjct: 485 LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLI 544
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
++ G P+ ++++ L+ ++I +E G+ H +K G N + + L+ MYAKCG
Sbjct: 545 ELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCG 604
Query: 429 R-------------------------------LNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
L+DAR VF+ + +++VSW ++ Y Q
Sbjct: 605 NVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQ 664
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
G G AL+++ M IKPN T +LSAC ++G ++ G F+++I G +
Sbjct: 665 AGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLG-EQFHALIFKLGFDTFLF 723
Query: 518 HIASVVHL-FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
S++ + F C + + + P E + + W +L GC
Sbjct: 724 VGNSLITMYFKCGYED--GFCVFEEMP-EHDLITWNAVLVGC 762
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 215/489 (43%), Gaps = 37/489 (7%)
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ--------------CGEHVH 160
N I G+ G + A+ VF+ ++R+ +SW S+++ Y Q G+++
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234
Query: 161 GLKIFLL--SRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF-----DKF 213
I L +++ + + S+ V N + + + K A + +K
Sbjct: 235 TWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKN 294
Query: 214 VAM--GLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
VA ++ Y C ++ A +F + + +W +I GY + EA D+FVKM
Sbjct: 295 VASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCR 354
Query: 272 SGLMPSEVTFSYVLGAFA--DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
+ P + F VL A D E IG L + IK G+ V + +L+ Y++ L
Sbjct: 355 TVARPDQSIFVVVLSAITGLDDLELIGS--LRPIAIKTGYEGDVVVGSAILNAYTRNGSL 412
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
+ ++ F+ M E + SW +IA +AI+L + + + + T + ++
Sbjct: 413 DLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQ----TVATKTAMMTAY 468
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
+ + I+ + I+ P NVV +A++ Y + G L +A+ +F + KN SW
Sbjct: 469 AQVGRIQKARLIFDEILNP----NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWA 524
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
M+ G+ Q+ REALE+ + + P+D++F LSAC +IG VE G +S+
Sbjct: 525 AMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIG-RVIHSLAIK 583
Query: 510 HGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRY 569
G + ++ ++A G ++ ++ + V W L+SG + L R
Sbjct: 584 TGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVK-DTVSWNSLISGLSENYMLDDARV 642
Query: 570 AAEKILSTD 578
EK+ D
Sbjct: 643 VFEKMPKRD 651
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 17/218 (7%)
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
F NT + + +EE+ + F+EM + DVVSWN++I G+ + EA +LF+
Sbjct: 172 FQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEA-----RLLFD 226
Query: 374 GHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
N+ T++ +L + IE ++ + + + NVV +A++ Y + G L +
Sbjct: 227 AFVGKNIRTWTILLTGYAKEGRIEEARE----VFESMTERNVVSWNAMISGYVQNGDLKN 282
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
ARK+FD + KN+ SWN+++ GY EA E++ M E N +++ ++S VH
Sbjct: 283 ARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPER----NSVSWMVMISGYVH 338
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
I E W F M R R D VV L A G
Sbjct: 339 ISDYWEAWDVFVKMCR---TVARPDQSIFVVVLSAITG 373
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 163/402 (40%), Gaps = 93/402 (23%)
Query: 203 VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEA 262
+F+C + +G +++ A RVF+ + D+ +W+++I GY+Q GK EA
Sbjct: 171 LFQCNTRIQELGRLG---------RVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEA 221
Query: 263 IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
LF AF G+ + + I +L
Sbjct: 222 RLLF-------------------DAFV-------GKNIRTWTI-------------LLTG 242
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
Y+K +EE+ + F+ M E +VVSWNA+I+G++ + A +L +M
Sbjct: 243 YAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMP----------- 291
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+ NV +++V Y C R+++AR++FD +
Sbjct: 292 ----------------------------EKNVASWNSVVTGYCHCYRMSEARELFDQMPE 323
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
+N VSW M+ GY EA +++ M +P+ + F+ VLSA + +E
Sbjct: 324 RNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSL 383
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG---CK 559
I+ G + +++++ + G A F ++ P E N+ W +++ C
Sbjct: 384 RPIAIKT-GYEGDVVVGSAILNAYTRNGSLDLAMHFFETMP-ERNEYSWTTMIAAFAQCG 441
Query: 560 THKDLV-LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
D + L E+ ++T +A+ + + ++DE
Sbjct: 442 RLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDE 483
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/670 (32%), Positives = 364/670 (54%), Gaps = 3/670 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEVA 60
I G+ V N ++ MY K + +N A++LFD MPE+ +V+SW+++IS +S G A
Sbjct: 207 IKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEA 266
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M L PN YT+V A+ AC + G IH + +S +N V+N LI M
Sbjct: 267 LRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAM 326
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G + A +F + ++ISW S+LS + Q G + L+ + R +G +
Sbjct: 327 YARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAV 386
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S++ A A GN GMQIH+ K L+ D V L+++YAK + +F +
Sbjct: 387 ISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPD 446
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+ +I G+AQ G A++LF ++ G+ + S +L A + +K +++
Sbjct: 447 KDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEI 506
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS II+ G S + N ++D Y +C ++ + + F+ ++ DVVSW ++I+ ++ +
Sbjct: 507 HSYIIRKGLSDLV-LQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLA 565
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+EL M G P+ + +IL+ ++ + A++ GK+ H +++ GF + S L
Sbjct: 566 NEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTL 625
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYA+CG L +R VF+ + +K+LV W +M+ Y HG GR A++++ M++ I P+
Sbjct: 626 VDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDH 685
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
F+ VL AC H GL+ EG + SM ++ + P +H A +V L AY+F+K
Sbjct: 686 IAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVK 745
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+EP VW LL C+ H + LG AA+K+L DPE+ ++++SNVY+ W +
Sbjct: 746 GMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKD 805
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF-DGG 659
VR MK LKK+ GCSW E+ NK+H F + Q +++ ++Q++ L +GG
Sbjct: 806 VEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGG 865
Query: 660 YVPDPIYSSH 669
YV + H
Sbjct: 866 YVAQTKFVLH 875
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 168/566 (29%), Positives = 305/566 (53%), Gaps = 11/566 (1%)
Query: 1 MITS-GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV 59
MITS +V L+ MY K + DA+KLFD MP + + +W+A+I + G P
Sbjct: 104 MITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLG 163
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+L +R M + + T+ + AC D R G E+HG + G V+N ++
Sbjct: 164 SLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVG 223
Query: 120 MYGKCGLLSSAQFVFDASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY KC L+ A+ +FD E+ + +SW S++S+Y G+ + L++F +K+ +A + +
Sbjct: 224 MYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTY 283
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ + L AC +K GM IH+ V K + + FVA LI +YA+ K+ A+ +F N+
Sbjct: 284 TFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNM 343
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D +W++++ G+ Q G EA+ + +M +G P V ++ A A T+ G
Sbjct: 344 DDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGM 403
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+ +K G S V N+++D Y+K ++ FD+M + DVVSW +IAGH +
Sbjct: 404 QIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNG 463
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ A+EL +++ EG ++ S+IL S + I K+ H I++ G S++V+ +
Sbjct: 464 SHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQN 522
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+VD+Y +CG ++ A ++F+ + K++VSW +M+ Y +GL EALE++ +M+E ++P
Sbjct: 523 GIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEP 582
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG---QTRRA 535
+ + + +LSA + +++G +IR G +++V ++A G ++R
Sbjct: 583 DSISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGSLASTLVDMYARCGTLEKSRNV 641
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ FI++ + V+W +++ H
Sbjct: 642 FNFIRNKDL----VLWTSMINAYGMH 663
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 220/421 (52%), Gaps = 2/421 (0%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLINMYGKCGLLSSAQFVFDA 136
Y + C S+ G+++H M S NS +S L+ MYGKCG L A+ +FD
Sbjct: 80 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 139
Query: 137 SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
+ +W +++ +Y GE + L+++ R SG+ + + +L AC +L + + G
Sbjct: 140 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYG 199
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-QLPDLTAWSALIGGYAQ 255
++H L K FVA ++ +Y KC L+ A ++F + + D+ +W+++I Y+
Sbjct: 200 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 259
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G++ EA+ LF +M + L P+ TF L A D G +H+ ++K + FV
Sbjct: 260 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 319
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
AN ++ Y++ + E+ F MD+ D +SWN++++G + + Y EA++ +M G
Sbjct: 320 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 379
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+L +I+ S+ G Q H +K G DS++ +G++LVDMYAK +
Sbjct: 380 KPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC 439
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+FD + K++VSW T++ G+AQ+G ALE++ +Q I + +L AC + L
Sbjct: 440 IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKL 499
Query: 496 V 496
+
Sbjct: 500 I 500
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 207/386 (53%), Gaps = 1/386 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S ++ NV N L+ MY +F ++ +A +F M + + ISW++++SGF Q G+ A
Sbjct: 308 VLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEA 367
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L ++ M +P+ + ++A A G+ G +IH ++GL+ + V N L++M
Sbjct: 368 LQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDM 427
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K + +FD +++ +SW ++++ + Q G H L++F + G+ +
Sbjct: 428 YAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMI 487
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L AC+ L + +IHS + + L D + G++++Y +C +D A+R+F I+
Sbjct: 488 SSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEF 546
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+++I Y G A EA++LF M +G+ P ++ +L A A + G+++
Sbjct: 547 KDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEI 606
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +I+ GF +A+T++D Y++C LE+S F+ + D+V W ++I +
Sbjct: 607 HGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCG 666
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNIL 386
AI+L + M E P+ + +L
Sbjct: 667 RAAIDLFRRMEDESIAPDHIAFVAVL 692
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/636 (32%), Positives = 353/636 (55%), Gaps = 6/636 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G N+ + L+ MY K ++ A K+F+ + ERN + W+A+I G++ G +
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVM 413
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + +T+ +S CA D G + H + + L N V N L++MY
Sbjct: 414 ELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMY 473
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC- 180
KCG L A+ +F+ +R+++SW +++ Y Q +F+ G+ +S+ +C
Sbjct: 474 AKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGI-VSDGACL 532
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS L AC + L G Q+H L KC L+ LI++Y+KC ++ A +VFS++
Sbjct: 533 ASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPE 592
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ + +ALI GY+Q EA+ LF +M + G+ PSE+TF+ ++ A + G Q
Sbjct: 593 WSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQF 651
Query: 301 HSLIIKMGFSS-FTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSWNALIAGHLASC 358
H IIK GFSS ++ ++L Y + E+ F E+ +V W +++GH +
Sbjct: 652 HGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
Y EA++ K+M +G P+ T+ +L + S + ++ G+ H I D + + +
Sbjct: 712 FYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN 771
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
L+DMYAKCG + + +VFD + + N+VSWN+++ GYA++G +AL+I+ M+++ I
Sbjct: 772 TLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIM 831
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P++ TF+GVL+AC H G V +G F MI +GI R+DH+A +V L G + A +
Sbjct: 832 PDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADD 891
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FI++ ++P+ +W LL C+ H D + G AAE+++ +P+++SA+++LSN+YA
Sbjct: 892 FIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGR 951
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
W+E +RK M+++ +KK G SW ++ + H F+
Sbjct: 952 WEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAA 987
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 174/561 (31%), Positives = 298/561 (53%), Gaps = 8/561 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M G P+ + + ++ Y+ ++ DA+ LF EMP +V++W+ +ISG + G VA
Sbjct: 252 MRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVA 311
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ YF M ++ T +SA + G +H + GL N +V + L++M
Sbjct: 312 IEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + +A VF+A ERN + W +++ Y GE +++F+ + SG I +F+
Sbjct: 372 YSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L CAV +L++G Q HS++ K L + FV L+++YAKC L+ A ++F ++
Sbjct: 432 TSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCD 491
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +W+ +IGGY Q EA DLF++M S G++ + L A +V G+Q+
Sbjct: 492 RDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQV 551
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L +K G ++++D YSKC ++E++ K F M E VVS NALIAG+ + +
Sbjct: 552 HCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGY-SQNNL 610
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN-VVIGSA 419
EA+ L ++ML +G P+ T++ I+ ++ G Q H I+K GF S +G +
Sbjct: 611 EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGIS 670
Query: 420 LVDMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+ +Y R+ +A +F LSS K++V W M+ G++Q+G EAL+ Y M+ + P
Sbjct: 671 LLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALP 730
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS--VVHLFACRGQTRRAY 536
+ TF+ VL C + + EG +S+I ++ +D + S ++ ++A G + +
Sbjct: 731 DQATFVTVLRVCSVLSSLREG-RAIHSLI--FHLAHDLDELTSNTLIDMYAKCGDMKSSS 787
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
+ N V W L++G
Sbjct: 788 QVFDEMRRRSNVVSWNSLING 808
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 165/562 (29%), Positives = 281/562 (50%), Gaps = 46/562 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI G N L+ MY K R+ DAQ++FD + + N + W+ L SG+ + G+PE A
Sbjct: 186 MIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEA 245
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M P++ +V +IN
Sbjct: 246 VIVFERMRGEGHRPDHLAFV-----------------------------------TVINT 270
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G L A+ +F + ++W ++S + + G + ++ FL RKS V + +
Sbjct: 271 YISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTL 330
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A ++ NL +G+ +H+ K L + +V L+++Y+KCEK++ A++VF ++
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ W+A+I GYA G++ + ++LF+ M SSG + TF+ +L A + G Q
Sbjct: 391 RNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQF 450
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS+IIK + FV N ++D Y+KC LE++ + F+ M + D VSWN +I G++ +
Sbjct: 451 HSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENE 510
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA +L M G + ++ L +++ + GKQ HC VK G D + GS+L
Sbjct: 511 SEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSL 570
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMY+KCG + DARKVF + ++VS N ++ GY+Q+ L EA+ ++ M + P++
Sbjct: 571 IDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKGVNPSE 629
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF ++ AC + G + +I+ G S +++ + L +RR E
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQIIK-WGFSSEGEYLG--ISLLGLYMNSRRMAEACA 686
Query: 541 -----SSPIEPNKVVWRCLLSG 557
SSP + V+W ++SG
Sbjct: 687 LFSELSSP--KSIVLWTGMMSG 706
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 143/480 (29%), Positives = 242/480 (50%), Gaps = 36/480 (7%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N ++ +Y K ++++ A+K F+ + E++V +W++++S +S IG P L F + ++
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIF 157
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN +T+ +S A + G++IH M + GLE NS+ L++MY KC L AQ V
Sbjct: 158 PNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRV 217
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD ++ N++ W L S Y + G + +F R G
Sbjct: 218 FDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEG--------------------- 256
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
D + +IN Y KL A +F + PD+ AW+ +I G+
Sbjct: 257 --------------HRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGH 302
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G AI+ F+ M S + + T VL A V G +H+ IK+G +S
Sbjct: 303 GKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 362
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+V ++++ YSKCE +E + K F+ ++E + V WNA+I G+ + + +EL DM
Sbjct: 363 YVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSS 422
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G+ + +T++++L+ + +E G Q H I+K N+ +G+ALVDMYAKCG L DA
Sbjct: 423 GYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDA 482
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
R++F+H+ ++ VSWNT++ GY Q EA +++ M I + L AC ++
Sbjct: 483 RQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNV 542
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 221/465 (47%), Gaps = 38/465 (8%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
R GK +H + G++ + N ++++Y KC +S A+ F+ SLE++ +W S+LS Y
Sbjct: 77 RIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFN-SLEKDVTAWNSMLSMY 135
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
G+ L+ F+ ++ + ++F+ + VL A N++ G QIH + K LE +
Sbjct: 136 SSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNS 195
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
+ L+++YAKC++L A RVF I P+ W+ L GY + G EA+ +F +M
Sbjct: 196 YCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGE 255
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G P + F TV++ Y L+++
Sbjct: 256 GHRPDHLAFV-----------------------------------TVINTYISLGKLKDA 280
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
F EM DVV+WN +I+GH AIE +M T ++L+ +
Sbjct: 281 RLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
++ G H +K G SN+ +GS+LV MY+KC ++ A KVF+ L +N V WN M+
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMI 400
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
GYA +G + +E++ M+ + +D TF +LS C +E G F+S+I +
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQ-FHSIIIKKKL 459
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ + ++V ++A G A + + + + V W ++ G
Sbjct: 460 TKNLFVGNALVDMYAKCGALEDARQIFEHM-CDRDNVSWNTIIGG 503
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 180/365 (49%), Gaps = 38/365 (10%)
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L++G +HS ++ + + +++LYAKC ++ A + F++++ D+TAW++++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLSM 134
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y+ +G+ + + FV +F + + P++ TFS VL A GRQ+H +IKMG
Sbjct: 135 YSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERN 194
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
++ ++D Y+KC+ L ++ + FD + + + V W L +G++ + EA+ + + M
Sbjct: 195 SYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRG 254
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EGH P+ + ++N Y G+L D
Sbjct: 255 EGHRPDHLAFVTVINT-----------------------------------YISLGKLKD 279
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
AR +F + S ++V+WN M+ G+ + G A+E + M+++ +K +T VLSA
Sbjct: 280 ARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
+ ++ G I+ G++ + +S+V +++ + + A + + E N V+W
Sbjct: 340 VANLDLGLVVHAEAIK-LGLASNIYVGSSLVSMYS-KCEKMEAAAKVFEALEERNDVLWN 397
Query: 553 CLLSG 557
++ G
Sbjct: 398 AMIRG 402
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 165/329 (50%), Gaps = 28/329 (8%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+ +HS + +G S + N ++D Y+KC + + K F+ + E DV +WN++++ + +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSS 137
Query: 357 SCHYGEA----IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
G+ + L ++++F PN +T+S +L+ S+ +E+G+Q HC ++K G +
Sbjct: 138 IGQPGKVLRSFVSLFENLIF----PNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
N G ALVDMYAKC RL DA++VFD + N V W + GY + GL EA+ ++ M+
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+P+ F+ V++ + +G +++ F M P D +A V + G
Sbjct: 254 GEGHRPDHLAFVTVINTYISLGKLKDARLLFGEM-------PSPDVVAWNVMI---SGHG 303
Query: 533 RRAYEFI--------KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYA-AEKILSTDPEDTS 583
+R E + + S ++ + +LS +L LG AE I +
Sbjct: 304 KRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIY 363
Query: 584 AHIMLSNVYAEANMWDETAKVRKIMKEKS 612
L ++Y++ + AKV + ++E++
Sbjct: 364 VGSSLVSMYSKCEKMEAAAKVFEALEERN 392
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 87/167 (52%), Gaps = 9/167 (5%)
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
A+ GK H + G DS +G+A+VD+YAKC +++ A K F+ L K++ +WN+ML
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLS 133
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
Y+ G + L + + EN I PN TF VLS VE G SMI+ G+
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIK-MGLE 192
Query: 514 PRMDHIASVVHLFA-CR--GQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++V ++A C G +R ++ I ++PN V W CL SG
Sbjct: 193 RNSYCGGALVDMYAKCDRLGDAQRVFDGI----VDPNTVCWTCLFSG 235
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/650 (32%), Positives = 354/650 (54%), Gaps = 3/650 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N +L M V+F I A ++F +MPER+V SW+ ++ G+ ++G E AL+ + M+ +
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT+ + C D R G+E+H + R G V N L+ MY KCG + +A+ V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD + ISW ++++ + + E GL++FL ++ V + + SV A +L +
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++H K D LI +Y ++ A ++FS ++ D +W+A+I GY
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G +A++++ M + P +VT + L A A + G +LH L GF +
Sbjct: 375 EKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
VAN +L+ Y+K + ++++++ F M E DVVSW+++IAG + EA+ + ML
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML-- 492
Query: 374 GHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
GH PN T+ L+ + A+ GK+ H +++ G S + +AL+D+Y KCG+ +
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A F S K++VSWN ML G+ HGLG AL +++ M E P++ TF+ +L AC
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
G+V +GW F+ M I P + H A +V L + G+ AY I PI+P+ VW
Sbjct: 613 AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWG 672
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL+GC+ H+ + LG AA+ IL +P D + H++L ++Y +A W + A+VRK M+EK
Sbjct: 673 ALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKG 732
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
L++D GCSW E++ H F T + Q +++ V++ + + G+ P
Sbjct: 733 LEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAP 782
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 224/477 (46%), Gaps = 6/477 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF V N L+ MY K I A+K+FD M + ISW+A+I+G + E L F
Sbjct: 227 GFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELF 286
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ ++PN T A + KE+HG + G ++ N LI MY
Sbjct: 287 LTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSL 346
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A +F ++++SW +++S Y + G L+++ L V+ + + AS L
Sbjct: 347 GRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASAL 406
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA LG L VG+++H L VA L+ +YAK + +D A VF + D+
Sbjct: 407 AACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVV 466
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+WS++I G+ ++ EA+ F M + P+ VTF L A A G+++H+ +
Sbjct: 467 SWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYV 525
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
++ G S +V N +LD Y KC + F E DVVSWN +++G +A A+
Sbjct: 526 LRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIAL 585
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALVDM 423
L M+ G P+ T+ +L S + G + H K N+ + +VD+
Sbjct: 586 SLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDL 645
Query: 424 YAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG---LGREALEIYSMMQENKI 476
++ G+L +A + + + K + W +L G H LG A ++ ++ N +
Sbjct: 646 LSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDV 702
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 241/514 (46%), Gaps = 9/514 (1%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YV C R +G R + N +++M + G + A V
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F ER+ SW ++ Y + G L ++ +G+ ++ VL C + +
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G ++H+ V + + V L+ +YAKC + A +VF + + D +W+A+I G+
Sbjct: 214 RMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGH 273
Query: 254 AQLGKACEA-IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
+ CEA ++LF+ M + + P+ +T + V A + E +++H +K GF+
Sbjct: 274 FE-NHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID 332
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
N+++ Y+ + ++ K F M+ D +SW A+I+G+ + +A+E+ M
Sbjct: 333 VAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMEL 392
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
P+ T ++ L + + ++ G + H GF VV+ +AL++MYAK ++
Sbjct: 393 HNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDK 452
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A +VF ++ K++VSW++M+ G+ + EAL + M +KPN TFI LSAC
Sbjct: 453 AIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML-GHVKPNSVTFIAALSACAA 511
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY-EFIKSSPIEPNKVVW 551
G + G ++R GI +++ L+ GQT A+ +F S E + V W
Sbjct: 512 TGALRSGKEIHAYVLR-CGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHS--EKDVVSW 568
Query: 552 RCLLSGCKTH--KDLVLGRYAAEKILSTDPEDTS 583
+LSG H D+ L + + P++ +
Sbjct: 569 NIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVT 602
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 169/358 (47%), Gaps = 11/358 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF +V N L+ MY R+ DA K+F M ++ +SW+A+ISG+ + G P+ AL
Sbjct: 325 VKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKAL 384
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ LM + P+ T A++ACA G G ++H G V+N L+ MY
Sbjct: 385 EVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMY 444
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K + A VF E++ +SW S+++ +C L F V + +
Sbjct: 445 AKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFI 503
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ L ACA G L+ G +IH+ V +C + + +V L++LY KC + A FS
Sbjct: 504 AALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEK 563
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W+ ++ G+ G A+ LF +M G P EVTF +L A + I G +L
Sbjct: 564 DVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELF 623
Query: 302 SLIIKMGFSSFTFVANT-----VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
++ + F+ V N ++D S+ L E+ + M + D W AL+ G
Sbjct: 624 HMMTE----KFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 677
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/668 (30%), Positives = 359/668 (53%), Gaps = 1/668 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N + L+ Y+++ +I+ A KLFD + +++ + W+ +++G+++ G + + F
Sbjct: 164 GMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGF 223
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
LM + PN T+ +S CAS+ G ++HG + SGL+ + N L++MY KC
Sbjct: 224 SLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKC 283
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G A +F ++++W ++S Y Q G L F SGV + +S+L
Sbjct: 284 GRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLL 343
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+ + NL+ QIH + + ++ D F+ LI+ Y KC + +A ++FS D+
Sbjct: 344 PSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVV 403
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
++A+I GY G +A+++F + + P+E+T +L + GR+LH I
Sbjct: 404 VFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFI 463
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK GF + + V+D Y+KC + + + F + + D+VSWN++I S + AI
Sbjct: 464 IKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAI 523
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ + M G C + + S L+ +++P+ +GK H ++K +V S L+DMY
Sbjct: 524 DIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMY 583
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTF 483
AKCG L A VFD + KN+VSWN+++ Y HG +++L ++ M++++ +P+ TF
Sbjct: 584 AKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITF 643
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ ++S C H+G V+EG +F SM +D+GI P+ +H A VV LF G+ AYE +KS P
Sbjct: 644 LEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMP 703
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
P+ VW LL + HK++ L + A+ +++ DP ++ ++++SN +A W+ K
Sbjct: 704 FPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTK 763
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
VR +MKE+ ++K G SW E+ H F + + ++ ++N L L GY+P
Sbjct: 764 VRSLMKEREVQKIPGYSWIEINKITHLFVSGDVNHPESSHIYSLLNSLLEELRLEGYIPQ 823
Query: 664 PIYSSHFE 671
P H E
Sbjct: 824 PYLPLHPE 831
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/555 (27%), Positives = 290/555 (52%), Gaps = 4/555 (0%)
Query: 12 TYNHLLLMYVKFSRINDAQKLFDEMPER--NVISWSALISGFSQIGMPEVALNYFRLMVC 69
T +L MY ++ K+F + R ++ W+++IS F ++G+ AL ++ M+C
Sbjct: 68 TDERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLC 127
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
+ P+ T+ V AC + + + + + + G++ N V++ LI Y + G +
Sbjct: 128 FGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDV 187
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A +FD L+++ + W +L+ Y +CG +K F L R ++ + + VL CA
Sbjct: 188 AGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCAS 247
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
+ +G+Q+H LV L+F+ + L+++Y+KC + D A ++F + D W+ +
Sbjct: 248 KLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCM 307
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I GY Q G E++ F +M SSG++P +TFS +L + + + RQ+H I++
Sbjct: 308 ISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSI 367
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
S F+ + ++D Y KC + + K F + + DVV + A+I+G+L + +A+E+ +
Sbjct: 368 SLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRW 427
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
++ PN T +IL + + A++ G++ H I+K GFD+ IG A++DMYAKCGR
Sbjct: 428 LVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGR 487
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+N A ++F LS +++VSWN+M+ AQ A++I+ M + I + + LSA
Sbjct: 488 MNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSA 547
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C ++ G MI+ H ++ + ++++ ++A G + A + E N V
Sbjct: 548 CANLPSESFGKAIHGFMIK-HSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMK-EKNIV 605
Query: 550 VWRCLLSGCKTHKDL 564
W +++ H L
Sbjct: 606 SWNSIIAAYGNHGKL 620
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 239/478 (50%), Gaps = 15/478 (3%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF---DASLERNS 142
C++ R GK++H + + + +S+ ++ MY CG S+ +F D+ L +S
Sbjct: 41 CSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL--SS 98
Query: 143 I-SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA--ISEFSCASVLGACAVLGNLKVGMQI 199
I W S++SS+ + G L + GV+ +S F C ++ AC L N K +
Sbjct: 99 IRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPC--LVKACVALKNFKGIEFL 156
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
V ++ ++FVA LI Y + K+D+A ++F + D W+ ++ GYA+ G +
Sbjct: 157 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGAS 216
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
I F M + P+ VTF VL A G QLH L++ G + N++
Sbjct: 217 DSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSL 276
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
L YSKC ++++K F M D V+WN +I+G++ S E++ +M+ G P+
Sbjct: 277 LSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDA 336
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
T+S++L S +E+ +Q HC I++ ++ + SAL+D Y KC ++ A+K+F
Sbjct: 337 ITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQ 396
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+S ++V + M+ GY +GL +ALE++ + + KI PN+ T + +L + ++ G
Sbjct: 397 CNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLG 456
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI----KSSPIEPNKVVWRC 553
+I+ G R + +V+ ++A G+ AYE K + N ++ RC
Sbjct: 457 RELHGFIIK-KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRC 513
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 234/455 (51%), Gaps = 3/455 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG N LL MY K R +DA KLF M + ++W+ +ISG+ Q G+ E +
Sbjct: 261 VVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEES 320
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F M+ + P+ T+ + + + + ++IH + R + L+ +++ LI+
Sbjct: 321 LIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDA 380
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC +S AQ +F + + + +++S Y G ++ L++F K ++ +E +
Sbjct: 381 YFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITL 440
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L L LK+G ++H + K + + +I++YAKC +++LA +F +
Sbjct: 441 VSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSK 500
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+++I AQ AID+F +M SG+ V+ S L A A++ G+ +
Sbjct: 501 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAI 560
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +IK + + +T++D Y+KC L+ ++ FD M E ++VSWN++IA +
Sbjct: 561 HGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKL 620
Query: 361 GEAIELLKDMLFE-GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
+++ L +M+ + G+ P+ T+ I+++ + ++ G + + + G +
Sbjct: 621 KDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYA 680
Query: 419 ALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
+VD++ + GRL++A + + + W T+L
Sbjct: 681 CVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLL 715
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 182/378 (48%), Gaps = 6/378 (1%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI--QL 240
+L C+ L L+ G Q+H+ V + D + ++ +YA C ++F + +L
Sbjct: 37 LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ W+++I + ++G +A+ + KM G+ P TF ++ A +K G L
Sbjct: 97 SSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFL 156
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
+ +G FVA++++ Y + ++ + K FD + + D V WN ++ G+
Sbjct: 157 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGAS 216
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
I+ M + PN T+ +L++ + I+ G Q H +V G D I ++L
Sbjct: 217 DSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSL 276
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MY+KCGR +DA K+F +S + V+WN M+ GY Q GL E+L + M + + P+
Sbjct: 277 LSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDA 336
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVH-LFACRGQTRRAYEFI 539
TF +L + +E ++R H IS + ++++ F CRG + F
Sbjct: 337 ITFSSLLPSVSKFENLEYCRQIHCYIMR-HSISLDIFLTSALIDAYFKCRGVSMAQKIFS 395
Query: 540 KSSPIEPNKVVWRCLLSG 557
+ + ++ VV+ ++SG
Sbjct: 396 QCNSVD--VVVFTAMISG 411
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 110/266 (41%), Gaps = 40/266 (15%)
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
S +L S++ + GKQ H ++ + ++ MYA CG ++ K+F L S
Sbjct: 35 SLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDS 94
Query: 443 K--NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+ ++ WN+++ + + GL +AL Y M + P+ +TF ++ ACV + +G
Sbjct: 95 RLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF-KGI 153
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFACRGQTR--------------------------- 533
+ + + G+ +S++ + G+
Sbjct: 154 EFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKC 213
Query: 534 -------RAYEFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPEDTSA 584
+ + ++ I PN V + C+LS C K DL + + + D E +
Sbjct: 214 GASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIK 273
Query: 585 HIMLSNVYAEANMWDETAKVRKIMKE 610
+ +LS +Y++ +D+ K+ ++M
Sbjct: 274 NSLLS-MYSKCGRFDDAIKLFRMMSR 298
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/650 (32%), Positives = 354/650 (54%), Gaps = 3/650 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N +L M V+F I A ++F +MPER+V SW+ ++ G+ ++G E AL+ + M+ +
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT+ + C D R G+E+H + R G V N L+ MY KCG + +A+ V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD + ISW ++++ + + E GL++FL ++ V + + SV A +L +
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++H K D LI +Y ++ A ++FS ++ D +W+A+I GY
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G +A++++ M + P +VT + L A A + G +LH L GF +
Sbjct: 375 EKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
VAN +L+ Y+K + ++++++ F M E DVVSW+++IAG + EA+ + ML
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML-- 492
Query: 374 GHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
GH PN T+ L+ + A+ GK+ H +++ G S + +AL+D+Y KCG+ +
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A F S K++VSWN ML G+ HGLG AL +++ M E P++ TF+ +L AC
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
G+V +GW F+ M I P + H A +V L + G+ AY I PI+P+ VW
Sbjct: 613 AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWG 672
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL+GC+ H+ + LG AA+ IL +P D + H++L ++Y +A W + A+VRK M+EK
Sbjct: 673 ALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKG 732
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
L++D GCSW E++ H F T + Q +++ V++ + + G+ P
Sbjct: 733 LEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAP 782
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 224/477 (46%), Gaps = 6/477 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF V N L+ MY K I A+K+FD M + ISW+A+I+G + E L F
Sbjct: 227 GFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELF 286
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ ++PN T A + KE+HG + G ++ N LI MY
Sbjct: 287 LTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSL 346
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A +F ++++SW +++S Y + G L+++ L V+ + + AS L
Sbjct: 347 GRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASAL 406
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA LG L VG+++H L VA L+ +YAK + +D A VF + D+
Sbjct: 407 AACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVV 466
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+WS++I G+ ++ EA+ F M + P+ VTF L A A G+++H+ +
Sbjct: 467 SWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYV 525
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
++ G S +V N +LD Y KC + F E DVVSWN +++G +A A+
Sbjct: 526 LRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIAL 585
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALVDM 423
L M+ G P+ T+ +L S + G + H K N+ + +VD+
Sbjct: 586 SLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDL 645
Query: 424 YAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG---LGREALEIYSMMQENKI 476
++ G+L +A + + + K + W +L G H LG A ++ ++ N +
Sbjct: 646 LSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDV 702
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 241/514 (46%), Gaps = 9/514 (1%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YV C R +G R + N +++M + G + A V
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F ER+ SW ++ Y + G L ++ +G+ ++ VL C + +
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G ++H+ V + + V L+ +YAKC + A +VF + + D +W+A+I G+
Sbjct: 214 RMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGH 273
Query: 254 AQLGKACEA-IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
+ CEA ++LF+ M + + P+ +T + V A + E +++H +K GF+
Sbjct: 274 FE-NHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID 332
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
N+++ Y+ + ++ K F M+ D +SW A+I+G+ + +A+E+ M
Sbjct: 333 VAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMEL 392
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
P+ T ++ L + + ++ G + H GF VV+ +AL++MYAK ++
Sbjct: 393 HNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDK 452
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A +VF ++ K++VSW++M+ G+ + EAL + M +KPN TFI LSAC
Sbjct: 453 AIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML-GHVKPNSVTFIAALSACAA 511
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY-EFIKSSPIEPNKVVW 551
G + G ++R GI +++ L+ GQT A+ +F S E + V W
Sbjct: 512 TGALRSGKEIHAYVLR-CGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHS--EKDVVSW 568
Query: 552 RCLLSGCKTH--KDLVLGRYAAEKILSTDPEDTS 583
+LSG H D+ L + + P++ +
Sbjct: 569 NIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVT 602
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 169/358 (47%), Gaps = 11/358 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF +V N L+ MY R+ DA K+F M ++ +SW+A+ISG+ + G P+ AL
Sbjct: 325 VKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKAL 384
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ LM + P+ T A++ACA G G ++H G V+N L+ MY
Sbjct: 385 EVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMY 444
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K + A VF E++ +SW S+++ +C L F V + +
Sbjct: 445 AKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFI 503
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ L ACA G L+ G +IH+ V +C + + +V L++LY KC + A FS
Sbjct: 504 AALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEK 563
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W+ ++ G+ G A+ LF +M G P EVTF +L A + I G +L
Sbjct: 564 DVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELF 623
Query: 302 SLIIKMGFSSFTFVAN-----TVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
++ + F+ V N ++D S+ L E+ + M + D W AL+ G
Sbjct: 624 HMMTE----KFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 677
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/647 (30%), Positives = 351/647 (54%), Gaps = 31/647 (4%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N L+ +Y++ A+++F +MP R+ ++++ LISG +Q E AL F
Sbjct: 173 GFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIF 232
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M L P+ T ++ACAS GD + G ++H ++++G+ + + L+++Y KC
Sbjct: 233 EEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKC 292
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + +A +F+ N + W +L ++ Q + ++F + +G+ ++F+ +L
Sbjct: 293 GDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCIL 352
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C G + +G QIHSL K E D +V+ LI++Y+K L+ A RV ++ D+
Sbjct: 353 RTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+++I GY Q +A+ F +M G+ P + + + A +K G Q+H+ +
Sbjct: 413 SWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARV 472
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
G+S + N +++ Y++C + E+ +F+E++ D ++WN L++G S + EA+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ M G N++T+ + L+ S+++ I+ GKQ H ++K G +G+AL+ +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG DA+ F +S +N VSWNT++ +QHG G EAL+ + M+
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMK------------ 640
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
+EG YF SM +GI PR DH A V+ +F GQ RA +F++ PI
Sbjct: 641 ------------KEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPI 688
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+ +VWR LLS CK HK++ +G AA+ +L +P D++++++LSN YA W +V
Sbjct: 689 AADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQV 748
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
RK+M+++ ++K+ G SW E++N +H F F G LH + Q+
Sbjct: 749 RKMMRDRGVRKEPGRSWIEVKNVVHAF-------FVGDRLHPLAEQI 788
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/561 (29%), Positives = 308/561 (54%), Gaps = 4/561 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
IT G + I N L+ +Y K + A+++F+E+ R+ +SW A++SG++Q G+ E AL
Sbjct: 69 ITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEAL 128
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+R M + P Y +S+C G+ +H + Y+ G + V N LI +Y
Sbjct: 129 WLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLY 188
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+CG A+ VF R+++++ +L+S + QC H L+IF + SG++ + +
Sbjct: 189 LRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTIS 248
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L ACA LG+L+ G Q+HS +FK + D + L++LY KC ++ A +F+
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRT 308
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+ ++ + Q+ ++ +LF +M ++G+ P++ T+ +L E G Q+H
Sbjct: 309 NVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIH 368
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
SL +K GF S +V+ ++D YSK LE++ + + + E DVVSW ++IAG++ +
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCK 428
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A+ K+M G P+ ++ ++ + I A+ G Q H + G+ +V I +ALV
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALV 488
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
++YA+CGR+ +A F+ + K+ ++WN ++ G+AQ GL EAL+++ M ++ +K N
Sbjct: 489 NLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA-YEFIK 540
TF+ LSA ++ +++G +I+ G S + +++ L+ G A EF +
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSE 607
Query: 541 SSPIEPNKVVWRCLLSGCKTH 561
S E N+V W +++ C H
Sbjct: 608 MS--ERNEVSWNTIITSCSQH 626
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 157/480 (32%), Positives = 250/480 (52%), Gaps = 9/480 (1%)
Query: 82 AVSACASRGDARSGK---EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
A+ AC RG+ R + EIH + GL + V N LI++Y K GL+ A+ VF+
Sbjct: 47 ALRAC--RGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELS 104
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
R+++SWV++LS Y Q G L ++ ++GV + + +SVL +C G
Sbjct: 105 ARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRS 164
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H+ +K + FV LI LY +C LA RVF ++ D ++ LI G+AQ
Sbjct: 165 VHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAH 224
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
A+++F +M SSGL P VT S +L A A + + G QLHS + K G SS + +
Sbjct: 225 GEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGS 284
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+LD Y KC +E +L F+ + +VV WN ++ ++ EL M G PN
Sbjct: 285 LLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPN 344
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
+TY IL + I+ G+Q H VK GF+S++ + L+DMY+K G L AR+V +
Sbjct: 345 QFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
L K++VSW +M+ GY QH ++AL + MQ+ I P++ +S C I + +
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQ 464
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE-PNKVVWRCLLSG 557
G ++ + G S + ++V+L+A G+ R A+ + IE +++ W L+SG
Sbjct: 465 GLQ-IHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEE--IEHKDEITWNGLVSG 521
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 246/533 (46%), Gaps = 34/533 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +G + I LL +YVK + A +F+ NV+ W+ ++ F QI +
Sbjct: 270 LFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKS 329
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M + PN +TY + C G+ G++IH ++G E + +VS LI+M
Sbjct: 330 FELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDM 389
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A+ V + E++ +SW S+++ Y Q L F +K G+
Sbjct: 390 YSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGL 449
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS + CA + ++ G+QIH+ V+ D + L+NLYA+C ++ A F I+
Sbjct: 450 ASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEH 509
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+ L+ G+AQ G EA+ +F++M SG+ + TF L A A++ E G+Q+
Sbjct: 510 KDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQI 569
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK G S T V N ++ Y KC E++ F EM E + VSWN +I
Sbjct: 570 HARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRG 629
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA++ M EG L + ++ SD I + C+
Sbjct: 630 LEALDFFDQMKKEG----LSYFKSM----SDKYGIRPRPDHYACV--------------- 666
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN--KIK 477
+D++ + G+L+ A+K + + + + + W T+L H + +E+ + ++ +++
Sbjct: 667 IDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVH----KNIEVGELAAKHLLELE 722
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH----IASVVHLF 526
P+D+ +LS + M+RD G+ + +VVH F
Sbjct: 723 PHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAF 775
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/653 (30%), Positives = 346/653 (52%), Gaps = 2/653 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEVALNYFRLMVCCVLEP 74
L+ MYVK + A+++FD MP + NV W+ ++ G+++ E +L F M + P
Sbjct: 349 LVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITP 408
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
+ + + AR G HG + + G V N LI+ Y K ++ +A VF
Sbjct: 409 DEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVF 468
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D +++ISW S++S G + +++F+ G + + SVL ACA
Sbjct: 469 DRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWF 528
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
VG +H K L + +A L+++Y+ C +++F N+ ++ +W+A+I Y
Sbjct: 529 VGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYT 588
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
+ G + L +M G+ P + VL FA + G+ +H I+ G
Sbjct: 589 RAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLP 648
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
VAN +++ Y C +EE+ FD + D++SWN LI G+ + E+ L DML +
Sbjct: 649 VANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQF 708
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
PN T + IL + I ++E G++ H ++ GF + +ALVDMY KCG L AR
Sbjct: 709 K-PNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVAR 767
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+FD L+ KNL+SW M+ GY HG G++A+ ++ M+ + ++P+ +F +L AC H G
Sbjct: 768 VLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSG 827
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
L EGW +FN+M +++ I P++ H +V L + G + A+EFI+S PIEP+ +W L
Sbjct: 828 LTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSL 887
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
L GC+ H+D+ L A+++ +PE+T +++L+N+YAEA W+ K++ + + L+
Sbjct: 888 LHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLR 947
Query: 615 KDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
++TGCSW E++ K+H F + + E ++ ++ + + G+ P YS
Sbjct: 948 ENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYS 1000
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 158/559 (28%), Positives = 270/559 (48%), Gaps = 20/559 (3%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPER--NVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
L+L Y+K + A+ +FDEMP R +V W++L+S +++ G + ++ FR M CC
Sbjct: 134 KRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCG 193
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ P+ + + AS G G+ IHG + + GL V+N LI +Y +CG + A
Sbjct: 194 VSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAM 253
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD+ R++ISW S +S Y G H + +F G IS + SVL ACA LG
Sbjct: 254 QVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELG 313
Query: 192 NLKVGMQIHSLVFKCAL---------EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP- 241
VG +H K L D+ + L+ +Y KC + A RVF +
Sbjct: 314 FELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKG 373
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+ ++GGYA+ + E++ LF +M G+ P E S +L + G H
Sbjct: 374 NVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAH 433
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
++K+GF + V N ++ FY+K +++ ++ FD M D +SWN++I+G ++
Sbjct: 434 GYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNS 493
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EAIEL M +GH + T ++L + G+ H VK G + +AL+
Sbjct: 494 EAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALL 553
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY+ C + ++F +++ KN+VSW M+ Y + GL + + M + IKP+
Sbjct: 554 DMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVF 613
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRG--QTRRAYEF 538
VL +++G IR+ G+ + +++ ++ CR + R ++
Sbjct: 614 AVTSVLHGFAGDESLKQGKSVHGYAIRN-GMEKLLPVANALMEMYVNCRNMEEARLVFDH 672
Query: 539 IKSSPIEPNKVVWRCLLSG 557
+ + I + W L+ G
Sbjct: 673 VTNKDI----ISWNTLIGG 687
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 250/496 (50%), Gaps = 11/496 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ +Y + + DA ++FD M R+ ISW++ ISG+ G + A++ F M E
Sbjct: 237 NALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTE 296
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL---------ELNSHVSNCLINMYGKC 124
+ T + + ACA G GK +HG +SGL ++ + + L+ MY KC
Sbjct: 297 ISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKC 356
Query: 125 GLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
G + SA+ VFDA + ++ W ++ Y + E L +F + G+ E + + +
Sbjct: 357 GDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCL 416
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L L + G+ H + K V LI+ YAK +D A VF + D
Sbjct: 417 LKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDT 476
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+++I G G EAI+LFV+M+ G T VL A A GR +H
Sbjct: 477 ISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGY 536
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+K G T +AN +LD YS C + + F M + +VVSW A+I + + + +
Sbjct: 537 SVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKV 596
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
LL++M+ +G P+++ +++L+ + +++ GK H ++ G + + + +AL++M
Sbjct: 597 AGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEM 656
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y C + +AR VFDH+++K+++SWNT++ GY+++ E+ ++S M + KPN T
Sbjct: 657 YVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLL-QFKPNTVTM 715
Query: 484 IGVLSACVHIGLVEEG 499
+L A I +E G
Sbjct: 716 TCILPAVASISSLERG 731
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 196/388 (50%), Gaps = 5/388 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF N L+ Y K + I++A +FD MP ++ ISW+++ISG + G+ A
Sbjct: 436 LVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEA 495
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M E + T + + ACA G+ +HG ++GL + ++N L++M
Sbjct: 496 IELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDM 555
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG--EHVHGLKIFLLSRKSGVAISEF 178
Y C S +F ++N +SW ++++SY + G + V GL ++ G+ F
Sbjct: 556 YSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMV--LDGIKPDVF 613
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ SVL A +LK G +H + +E VA L+ +Y C ++ A VF ++
Sbjct: 614 AVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHV 673
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +W+ LIGGY++ A E+ LF M P+ VT + +L A A + GR
Sbjct: 674 TNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGR 732
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H+ ++ GF ++ +N ++D Y KC L + FD + + +++SW +IAG+
Sbjct: 733 EIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHG 792
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNIL 386
+A+ L + M G P+ ++S IL
Sbjct: 793 CGKDAVALFEQMRGSGVEPDTASFSAIL 820
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 213/449 (47%), Gaps = 20/449 (4%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLE--LNSHVSNCLINMYGKCGLLSSAQFVFD 135
+Y V C + + H + R+G + S + L+ Y KCG L A+ VFD
Sbjct: 96 SYCAVVQLCGEERSLEAARRAHA-LVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFD 154
Query: 136 ASLER--NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
R + W SL+S+Y + G+ G+ +F + GV+ + + VL A LG++
Sbjct: 155 EMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSI 214
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
G IH L+ K L VA LI LY++C ++ A +VF ++ D +W++ I GY
Sbjct: 215 TEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGY 274
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF---- 309
G A+DLF KM+S G S VT VL A A++ + G+ +H +K G
Sbjct: 275 FSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDL 334
Query: 310 ----SSFTFVANTVLDF-YSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEA 363
S + L F Y KC + + + FD M + +V WN ++ G+ + + E+
Sbjct: 335 ESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEES 394
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ L + M G P+ + S +L + + G H +VK GF + + +AL+
Sbjct: 395 LLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISF 454
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
YAK +++A VFD + ++ +SWN+++ G +GL EA+E++ M + + T
Sbjct: 455 YAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTL 514
Query: 484 IGVLSACVH-----IGLVEEGWHYFNSMI 507
+ VL AC +G V G+ +I
Sbjct: 515 LSVLPACARSHYWFVGRVVHGYSVKTGLI 543
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV--V 415
C G+ L+ + +G + +Y ++ + + ++E ++ H +V+ G + V
Sbjct: 74 CQAGDLAAALRLLGSDGGV-GVRSYCAVVQLCGEERSLEAARRAHA-LVRAGTGGIIGSV 131
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSK--NLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+G LV Y KCG L AR VFD + + ++ W +++ YA+ G +E + ++ MQ
Sbjct: 132 LGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQC 191
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEG 499
+ P+ + VL +G + EG
Sbjct: 192 CGVSPDAHAVSCVLKCIASLGSITEG 217
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/600 (33%), Positives = 326/600 (54%), Gaps = 19/600 (3%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
N V + +CA + GK++H M G + LINMY KCG + A VF
Sbjct: 10 NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69
Query: 135 -DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
D ERN ++ +++S + G G + + R GV +++ V+ C + +
Sbjct: 70 YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV 129
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
K +IH + K LE D FV L+N Y K ++ A +VF + + D+ W+A+I GY
Sbjct: 130 K---KIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGY 186
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
A++G EA+++F +M G+ PS T + +L FA + G+ +H +++KMG+ S
Sbjct: 187 AKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGV 246
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V+N ++D Y KC+ + ++L F+ ++E D+ SWN++I+ H + + L ML
Sbjct: 247 SVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGS 306
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD--------SNVVIGSALVDMYA 425
G P+L T + +L S + A+ G++ H ++ G N+++ +A++DMYA
Sbjct: 307 GILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYA 366
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KCG +N+A K+FD +S K++ SWN M++GY HG EAL ++S M E + KPN+ T +G
Sbjct: 367 KCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVG 426
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
VLSAC H G V G + M G+ P ++H V+ + G AYE ++ PI+
Sbjct: 427 VLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQ 486
Query: 546 PNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVR 605
N VVWR LL C+ H + L AA ++L +PE +++++SNVY ++E +VR
Sbjct: 487 ANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVR 546
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPI 665
K MKE+++KK GCSW EL++ +H F T G H +N L+ L D G++ D +
Sbjct: 547 KTMKEQNVKKTPGCSWIELKDGVHVFRT-------GDRTHSELNALTNQLCDIGFILDEV 599
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 226/470 (48%), Gaps = 14/470 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLF-DEMPERNVISWSALISGFSQIGMPEV 59
MIT GF P+ + L+ MY K ++ +A +F D ERNV +++A+ISGF G+
Sbjct: 37 MITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNVFAYNAIISGFVSNGLASK 96
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+++ M + P+ YT+ V C + K+IHG + + GLEL+ V + L+N
Sbjct: 97 GFQFYKKMRLEGVMPDKYTFPCVVRTCC---EVMEVKKIHGCLLKMGLELDVFVGSALVN 153
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y K G + AQ VF R+ + W ++++ Y + G L++F GVA S F+
Sbjct: 154 TYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFT 213
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+L A G+L G +H +V K + V+ LI++Y KC+ + A +F I
Sbjct: 214 ITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMIN 273
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +W+++I + Q G + LF KM SG++P VT + VL A + + + GR+
Sbjct: 274 EKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGRE 333
Query: 300 LHSLIIKMGFS--------SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
+H +I G V+N V+D Y+KC + +LK FD M + DV SWN +I
Sbjct: 334 IHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMI 393
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GF 410
G+ + EA+ + M PN T +L+ + + G+ + G
Sbjct: 394 MGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGV 453
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+ + ++DM + G L DA ++ + N V W +L HG
Sbjct: 454 IPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHG 503
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/640 (32%), Positives = 351/640 (54%), Gaps = 1/640 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF-RLMVCCVL 72
N+ L + VK + + DA+ LFD++P+R+ +SW+ +ISG+ AL F ++ + L
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+ + + C + G +HG ++GL + V + L++MY K G + +
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VFD RN+++W ++++ + G GL F +S V ++ A L A A G
Sbjct: 173 VFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGA 232
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L G IH+ K + + FVA L +Y KC KLD F ++ D+ +W+ ++
Sbjct: 233 LNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTA 292
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y Q+GK + F +M +S ++P+E TFS V+ A+ G QLH+ ++ +GF +
Sbjct: 293 YIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNA 352
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
VAN+++ YSKC L K F M D+++W+ +IA + + EA E L M
Sbjct: 353 LSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRS 412
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EG PN + +++L++ + +E GKQ H ++ G + ++ SAL+ MYAKCG + +
Sbjct: 413 EGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAE 472
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A K+F +++SW M+ GYA+HG +EA+E++ +Q+ ++P+ TFIGVL+AC H
Sbjct: 473 ASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSH 532
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
G+V+ G++YFNSM +D+ I+P +H ++ L G+ A I+S PI+ + VVW
Sbjct: 533 AGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWS 592
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL C+ H D+ G+ AA ++L DP HI L+N++A W E A +R +MK K
Sbjct: 593 TLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKG 652
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
+ K+ G S ++++ + F + + QG D++ ++ +L+
Sbjct: 653 VVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELA 692
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 235/467 (50%), Gaps = 16/467 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G +V + LL MY+K I + K+FDEMP RN ++W+A+I+G + G E L
Sbjct: 143 VKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGL 202
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
YF M +E + Y Y A+ A A G G+ IH + + G + NS V+N L MY
Sbjct: 203 AYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMY 262
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG L F + +SW +++++Y Q G+ GL+ F R S V +E++ +
Sbjct: 263 NKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFS 322
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+V+ CA LK G Q+H+ V VA ++ LY+KC +L S+VF +++
Sbjct: 323 AVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR 382
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ WS +I Y+Q+G EA + +M S G P+E + VL + G+QLH
Sbjct: 383 DIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLH 442
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ ++ +G + V + ++ Y+KC + E+ K F + + D++SW A+I+G+ H
Sbjct: 443 AHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQ 502
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG--------KQTHCCIVKPGFDSN 413
EAIEL +++ G P+ T+ +L S ++ G K H K +
Sbjct: 503 EAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHY--- 559
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG 459
++D+ + GRL+DA + + + + V W+T+L HG
Sbjct: 560 ----GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHG 602
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 225/464 (48%), Gaps = 11/464 (2%)
Query: 107 LELNSHVSNCL--------INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
L LN+H SN + + + K L A+ +FD +R+ +SW +++S Y +
Sbjct: 37 LTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDS 96
Query: 159 VHGLKIFLLSR-KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
L++F R +S + I F + L C + N G +H K L FV
Sbjct: 97 SEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSA 156
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
L+++Y K ++ + +VF + + W+A+I G + G + + F M S +
Sbjct: 157 LLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYD 216
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
++ L A AD GR +H+ +K GF +FVAN++ Y+KC L+ L TF
Sbjct: 217 SYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFR 276
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
+M DVVSW ++ ++ ++ K M PN YT+S +++ ++ ++W
Sbjct: 277 KMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKW 336
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
G+Q H ++ GF + + + ++++ +Y+KCG L KVF + +++++W+T++ Y+Q
Sbjct: 337 GEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQ 396
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
G G EA E S M+ KPN+ VLS C + ++E+G ++ + G+
Sbjct: 397 VGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQG-KQLHAHVLSVGLEQTSM 455
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++++ ++A G A + S + + + W ++SG H
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDS-WKDDIISWTAMISGYAEH 498
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 7/228 (3%)
Query: 279 VTFSYVLGAFADVKETIGGRQLH----SLIIKMGFSSFTFVA--NTVLDFYSKCELLEES 332
V ++ + A A K R L+ SL + FS+ +A N L K L+++
Sbjct: 9 VKRNFTVLAVAGAKTNDNPRHLYTKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDA 68
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP-NLYTYSNILNISSD 391
FD++ + D VSW +I+G++ S EA+ L M + + + S L
Sbjct: 69 RDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGL 128
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+G H VK G ++V +GSAL+DMY K G + + KVFD + ++N V+W +
Sbjct: 129 GLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAV 188
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ G + G L +S M +K++ + + L A G + G
Sbjct: 189 ITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHG 236
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+++ G + + L++MY K I +A K+F + + ++ISW+A+ISG+++ G + A
Sbjct: 445 VLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEA 504
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS------ 114
+ F + L P+ T++G ++AC + +G G Y + + + H++
Sbjct: 505 IELFENIQKVGLRPDSVTFIGVLTAC-----SHAGMVDLGFYYFNSMSKDYHITPSKEHY 559
Query: 115 NCLINMYGKCGLLSSAQ-FVFDASLERNSISWVSLLSSYCQ------CGEHVHGLKIFLL 167
C+I++ + G L A+ + ++ + + W +LL + C+ CG+ + L
Sbjct: 560 GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRA-CRIHGDVDCGQRAAAEVLKLD 618
Query: 168 SRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV 203
+G I+ + + G N+++ M+ +V
Sbjct: 619 PNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVV 654
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/627 (32%), Positives = 343/627 (54%), Gaps = 4/627 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + + L+ MY K RI +A+ LFD+MPER+ +SW+++I+G+SQ G+ E A
Sbjct: 67 ILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEA 126
Query: 61 LNYFRLMVCCV----LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
F M+ L + +T + AC G +R GK +HG + G + + VS
Sbjct: 127 CGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGS 186
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+ MY KCG+L A FD ++ ++W ++++ Y Q +++F G +
Sbjct: 187 TVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPN 246
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+ + VL A + + VG H+ V K D FVA L+++Y+K ++ R F
Sbjct: 247 DTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFG 306
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ +L +++ALI GY+ +GK EA+ ++ ++ S G+ P TF + + +
Sbjct: 307 EMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAE 366
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G Q+H +K G S V N++++FYSKC + +L+ F+ ++ + V W +I+G
Sbjct: 367 GAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQ 426
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ +A+ M + ++ S+++ S A+E G+ H ++K G D + +
Sbjct: 427 NGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYV 486
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
GSA++DMY+KCG + DA+KVF + KN+VSWN+M+ GYAQ+G +EAL ++ M + I
Sbjct: 487 GSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGI 546
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P TF+G+L AC H GLVEEG +++N M+ ++GI P M+H +V L G A
Sbjct: 547 LPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAE 606
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
F+ SS +W LLS C HK+ +G AA+ L +P +S++ LSN+YA
Sbjct: 607 AFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIYASKE 666
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTE 623
+W E +++R +MK+ ++K+ GCSW E
Sbjct: 667 LWSEVSRIRDLMKDMGVEKEPGCSWIE 693
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 164/526 (31%), Positives = 278/526 (52%), Gaps = 6/526 (1%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG 95
M E NV+ W++ I+ ++ G+ + AL+ F M+ +EPN TY +SACA
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
+H + + G VS+ LI+MY K + A+F+FD ER+ +SW S+++ Y Q
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 156 GEHVHGLKIFLLSRKS----GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
G + +F S + +S+F+ A+VL AC LG ++G +H K + D
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
FV+ + +Y KC LD+A F I+ D+ AW+ +I GYAQ EAI+LF +M
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
G P++ TF VL A + ++ GR H+ ++K+G S FVA ++D YSK +E+
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIED 300
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+ F EM + ++VS+NALI G+ Y EA+ + + EG P+ +T+ + + S
Sbjct: 301 VERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSV 360
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ G Q H VK G DS+V +G+++V+ Y+KCG + A + F+ ++ N V W +
Sbjct: 361 SSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGI 420
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
+ G+AQ+G G +AL + M++ K ++ + V+ A VE+G H ++ + G
Sbjct: 421 ISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRH-LHAHVMKSG 479
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ + ++V+ +++ G A + P E N V W +++G
Sbjct: 480 LDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP-EKNVVSWNSMITG 524
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/670 (31%), Positives = 378/670 (56%), Gaps = 15/670 (2%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE-RNVISWSALISGFSQIGMPEVAL 61
T + + N LL MY K + A+++FD M R+++SW+A+ ++ G + AL
Sbjct: 72 TEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEAL 131
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARS-GKEIHGRMYRSGL-ELNSHVSNCLIN 119
M+ L PN +T A AC RS G + G ++G + V LI+
Sbjct: 132 VLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALID 191
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
M+ + G L +A+ VF+ +ER + W +++ Y Q G +++FL + G ++
Sbjct: 192 MFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYT 251
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE---KLDLASRVFS 236
+S++ ACA G+ +G Q+HSLV + L D V+ GL+++Y K + ++ A +VF
Sbjct: 252 MSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFK 311
Query: 237 NIQLPDLTAWSALIGGYAQLG-KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ ++ +W+ALI GY Q G + A++L +M + + P+ +T+S +L A A++ +
Sbjct: 312 RMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQD 371
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA-GH 354
GRQ+H+ ++K + V N ++ Y++ +EE+ K FD++ E +++S ++ I
Sbjct: 372 SGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETG 431
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
++ + IE + + + +T++++L+ ++ + G+Q H +K GF+S+
Sbjct: 432 RSNASWSSQIESMDVGV------STFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDK 485
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
I ++LV MY++CG L+DA + FD + N++SW +++ A+HG AL ++ M
Sbjct: 486 GISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMIL 545
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+ +KPND T+I VLSAC H+GLV+EG YF SM +DH + PRM+H A +V L A G +
Sbjct: 546 SGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQ 605
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A EFI P + + +VW+ LL C+T++++ +G AA ++ +P+D + +++LSN+YA
Sbjct: 606 EALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYA 665
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
+WDE A++R +M+ ++L K+TG SW + N +H F + + +++ + L
Sbjct: 666 HGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIR 725
Query: 654 HLFDGGYVPD 663
+ D GYVPD
Sbjct: 726 EIKDIGYVPD 735
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 247/515 (47%), Gaps = 52/515 (10%)
Query: 95 GKEIHGRMYRSG-LELNSHVSNCLINMYGKCGLLSSAQFVFDASLE-RNSISWVSLLSSY 152
G+ +H R+ + L+ ++ V+N L+ MY KCG + +A+ VFD R+ +SW ++
Sbjct: 62 GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF-- 210
+ G L + +SG+ + F+ + AC G L L F F
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHAC-FPGELFRSSGGTVLGFAIKTGFWG 180
Query: 211 -DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
D V LI+++A+ L A +VF+ + + W+ +I Y Q G A +A++LF+ M
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGM 240
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL- 328
G P T S ++ A A+ G+QLHSL++++G S T V+ ++D Y+K ++
Sbjct: 241 LEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQME 300
Query: 329 --LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE--AIELLKDMLFEGHCPNLYTYSN 384
+E + K F M H+V+SW ALI+G++ C E A+ELL +ML E PN TYS+
Sbjct: 301 QSMECARKVFKRMPTHNVMSWTALISGYV-QCGGQENNAVELLCEMLNESIEPNHLTYSS 359
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
+L +++ + G+Q H ++K + V+G+ALV MYA+ G + +ARK FD L +N
Sbjct: 360 LLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERN 419
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
L+S ++ + GR S ++ + + TF +LSA +GL +G
Sbjct: 420 LLSTSSDI-----GETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHA 474
Query: 505 SMIR-----DHGISPRM----------------------DH----IASVVHLFACRGQTR 533
I+ D GIS + DH S++ A G
Sbjct: 475 LSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAE 534
Query: 534 RAYEFIKS---SPIEPNKVVWRCLLSGCKTHKDLV 565
RA S ++PN V + +LS C +H LV
Sbjct: 535 RALSLFHDMILSGVKPNDVTYIAVLSAC-SHVGLV 568
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 91/162 (56%), Gaps = 6/162 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQIGMPEVA 60
I +GF + N L+ MY + ++DA + FDEM + NVISW+++IS ++ G E A
Sbjct: 477 IKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERA 536
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG--LELNSHVSNCLI 118
L+ F M+ ++PN TY+ +SAC+ G + GKE M + + H + C++
Sbjct: 537 LSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYA-CMV 595
Query: 119 NMYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHV 159
++ + GL+ A +F+ + + +++ W +LL + C+ E++
Sbjct: 596 DLLARSGLVQEALEFINEMPCKADALVWKTLLGA-CRTYENI 636
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/671 (32%), Positives = 366/671 (54%), Gaps = 6/671 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISW-SALISGFSQIGMPEV 59
++T G +V +L+ +YV + + A+ +FD + IS + L++G+++ M +
Sbjct: 29 VVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDE 88
Query: 60 ALNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
AL F +LM L+P+ YTY + AC G+ IH + + GL ++ V + L+
Sbjct: 89 ALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLV 148
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY KC A +FD +++ W +++S Y Q G+ L+ F + R+ G
Sbjct: 149 GMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSV 208
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ + + +CA L +L G +IH + D FV+ L+++Y KC +L++A VF +
Sbjct: 209 TITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQM 268
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ AW+++I GY G I LF +M+S G+ P+ T + L A + + + G+
Sbjct: 269 PNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGK 328
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H II+ F+ ++++D Y KC +E + F M + VSWN +I+G++
Sbjct: 329 FVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEG 388
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+A+ L +M P+ T++++L S + A+E G++ H IV+ +N V+
Sbjct: 389 KLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMG 448
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAKCG + +A VF L ++LVSW +M+ Y HG EALE+++ M ++ +KP
Sbjct: 449 ALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKP 508
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ +LSAC H GLV++G ++FN MI +GI PR++H + ++ L G+ AYE
Sbjct: 509 DRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEI 568
Query: 539 IKSSP-IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
++S+P I + + L S C+ HK+L LG AE ++ DP+D+S +I+LSN+YA
Sbjct: 569 LQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGK 628
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
WDE VR MK+ LKK+ GCSW E+ K+ F + + + +++ L+ H+ D
Sbjct: 629 WDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSHMED 688
Query: 658 GGYVPDPIYSS 668
PIY S
Sbjct: 689 EC---KPIYMS 696
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 8/278 (2%)
Query: 284 VLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHD 343
+L A + K G+ LH ++ +G + +V ++ Y C L + + FD ++
Sbjct: 9 LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPF 68
Query: 344 VVSW-NALIAGHLASCHYGEAIELL-KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
+S N L+AG+ +C Y EA+ L K M + P+ YTY ++L + + G+
Sbjct: 69 EISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMI 128
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H C+VK G ++V+GS+LV MYAKC A K+FD + K++ WNT++ Y Q G
Sbjct: 129 HTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKF 188
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI-- 519
EAL + MM+ +P+ T +S+C + ++ G ++ + G RMD
Sbjct: 189 EEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELV-NSGF--RMDSFVS 245
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
A++V ++ GQ A E + P V W +++G
Sbjct: 246 AALVDMYGKCGQLEMAIEVFEQMP-NKTVVAWNSMING 282
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/636 (31%), Positives = 355/636 (55%), Gaps = 6/636 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G N+ + L+ MY K ++ A K+F+ + E+N + W+A+I G++ G +
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVM 413
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + +T+ +S CA+ D G + H + + L N V N L++MY
Sbjct: 414 ELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMY 473
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC- 180
KCG L A+ +F+ +R++++W +++ SY Q +F G+ +S+ +C
Sbjct: 474 AKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGI-VSDGACL 532
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS L AC + L G Q+H L KC L+ D LI++Y+KC + A +VFS++
Sbjct: 533 ASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPE 592
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ + +ALI GY+Q EA+ LF +M + G+ PSE+TF+ ++ A + G Q
Sbjct: 593 WSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQF 651
Query: 301 HSLIIKMGFSS-FTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSWNALIAGHLASC 358
H I K GFSS ++ ++L Y + E+ F E+ +V W +++GH +
Sbjct: 652 HGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
Y EA++ K+M +G P+ T+ +L + S + ++ G+ H I D + + +
Sbjct: 712 FYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN 771
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
L+DMYAKCG + + +VFD + + N+VSWN+++ GYA++G +AL+I+ M+++ I
Sbjct: 772 TLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIM 831
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P++ TF+GVL+AC H G V +G F MI +GI R+DH+A +V L G + A +
Sbjct: 832 PDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADD 891
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FI++ ++P+ +W LL C+ H D + G +AEK++ +P+++SA+++LSN+YA
Sbjct: 892 FIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGC 951
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
W++ +RK+M+++ +KK G SW +++ + H F+
Sbjct: 952 WEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAA 987
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/561 (29%), Positives = 289/561 (51%), Gaps = 8/561 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M G P+ + + ++ Y++ ++ DA+ LF EM +V++W+ +ISG + G VA
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ YF M ++ T +SA + G +H + GL N +V + L++M
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + +A VF+A E+N + W +++ Y GE +++F+ + SG I +F+
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L CA +L++G Q HS++ K L + FV L+++YAKC L+ A ++F +
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+ +IG Y Q EA DLF +M G++ + L A V G+Q+
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L +K G ++++D YSKC +++++ K F + E VVS NALIAG+ + +
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNL 610
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN-VVIGSA 419
EA+ L ++ML G P+ T++ I+ ++ G Q H I K GF S +G +
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Query: 420 LVDMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+ MY + +A +F LSS K++V W M+ G++Q+G EAL+ Y M+ + + P
Sbjct: 671 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS--VVHLFACRGQTRRAY 536
+ TF+ VL C + + EG +S+I ++ +D + S ++ ++A G + +
Sbjct: 731 DQATFVTVLRVCSVLSSLREG-RAIHSLI--FHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
+ N V W L++G
Sbjct: 788 QVFDEMRRRSNVVSWNSLING 808
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 165/560 (29%), Positives = 284/560 (50%), Gaps = 42/560 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI G N L+ MY K RI+DA+++F+ + + N + W+ L SG+ + G+PE A
Sbjct: 186 MIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEA 245
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M P++ +V +IN
Sbjct: 246 VLVFERMRDEGHRPDHLAFV-----------------------------------TVINT 270
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G L A+ +F + ++W ++S + + G ++ F RKS V + +
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A ++ NL +G+ +H+ K L + +V L+++Y+KCEK++ A++VF ++
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ W+A+I GYA G++ + ++LF+ M SSG + TF+ +L A + G Q
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS+IIK + FV N ++D Y+KC LE++ + F+ M + D V+WN +I ++ +
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA +L K M G + ++ L + + + GKQ HC VK G D ++ GS+L
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL 570
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMY+KCG + DARKVF L ++VS N ++ GY+Q+ L EA+ ++ M + P++
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSE 629
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA-SVVHLFA-CRGQTRRAYEF 538
TF ++ AC + G F+ I G S +++ S++ ++ RG T F
Sbjct: 630 ITFATIVEACHKPESLTLGTQ-FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 539 IK-SSPIEPNKVVWRCLLSG 557
+ SSP + V+W ++SG
Sbjct: 689 SELSSP--KSIVLWTGMMSG 706
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 244/486 (50%), Gaps = 36/486 (7%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N ++ +Y K ++++ A+K FD + E++V +W++++S +S IG P L F + +
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN +T+ +S CA + G++IH M + GLE NS+ L++MY KC +S A+ V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ ++ N++ W L S Y + G + +F R G
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG--------------------- 256
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
D + +IN Y + KL A +F + PD+ AW+ +I G+
Sbjct: 257 --------------HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGH 302
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G AI+ F M S + + T VL A V G +H+ IK+G +S
Sbjct: 303 GKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 362
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+V ++++ YSKCE +E + K F+ ++E + V WNA+I G+ + + +EL DM
Sbjct: 363 YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS 422
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G+ + +T++++L+ + +E G Q H I+K N+ +G+ALVDMYAKCG L DA
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 482
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
R++F+ + ++ V+WNT++ Y Q EA +++ M I + L AC H+
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542
Query: 494 GLVEEG 499
+ +G
Sbjct: 543 HGLYQG 548
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 221/463 (47%), Gaps = 38/463 (8%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
R GK +H + G++ + N ++++Y KC +S A+ FD LE++ +W S+LS Y
Sbjct: 77 RIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDF-LEKDVTAWNSMLSMY 135
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
G+ L+ F+ ++ + ++F+ + VL CA N++ G QIH + K LE +
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
+ L+++YAKC+++ A RVF I P+ W+ L GY + G EA+ +F +M
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G P + F TV++ Y + L+++
Sbjct: 256 GHRPDHLAFV-----------------------------------TVINTYIRLGKLKDA 280
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
F EM DVV+WN +I+GH AIE +M T ++L+ +
Sbjct: 281 RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
++ G H +K G SN+ +GS+LV MY+KC ++ A KVF+ L KN V WN M+
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
GYA +G + +E++ M+ + +D TF +LS C +E G F+S+I +
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKL 459
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+ + ++V ++A G A + + + + V W ++
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTII 501
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 179/365 (49%), Gaps = 38/365 (10%)
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L++G +HS ++ + + +++LYAKC ++ A + F ++ D+TAW++++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y+ +GK + + FV +F + + P++ TFS VL A GRQ+H +IKMG
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
++ ++D Y+KC+ + ++ + F+ + + + V W L +G++ + EA+ + + M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EGH P+ + ++N Y + G+L D
Sbjct: 255 EGHRPDHLAFVTVINT-----------------------------------YIRLGKLKD 279
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
AR +F +SS ++V+WN M+ G+ + G A+E + M+++ +K +T VLSA
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
+ ++ G I+ G++ + +S+V +++ + + A + + E N V W
Sbjct: 340 VANLDLGLVVHAEAIK-LGLASNIYVGSSLVSMYS-KCEKMEAAAKVFEALEEKNDVFWN 397
Query: 553 CLLSG 557
++ G
Sbjct: 398 AMIRG 402
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 161/320 (50%), Gaps = 10/320 (3%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+ +HS + +G S + N ++D Y+KC + + K FD + E DV +WN++++ + +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
G+ + + PN +T+S +L+ + +E+G+Q HC ++K G + N
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
G ALVDMYAKC R++DAR+VF+ + N V W + GY + GL EA+ ++ M++
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
+P+ F+ V++ + +G +++ F M SP + ++ RG A
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEM-----SSPDVVAWNVMISGHGKRGCETVAI 312
Query: 537 EF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYA-AEKILSTDPEDTSAHIMLSNVY 592
E+ ++ S ++ + +LS +L LG AE I + L ++Y
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 593 AEANMWDETAKVRKIMKEKS 612
++ + AKV + ++EK+
Sbjct: 373 SKCEKMEAAAKVFEALEEKN 392
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 89/167 (53%), Gaps = 9/167 (5%)
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
A+ GK H + G DS +G+A+VD+YAKC +++ A K FD L K++ +WN+ML
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
Y+ G + L + + EN+I PN TF VLS C VE G SMI+ G+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLE 192
Query: 514 PRMDHIASVVHLFA-CR--GQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++V ++A C RR +E+I ++PN V W CL SG
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI----VDPNTVCWTCLFSG 235
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/653 (32%), Positives = 353/653 (54%), Gaps = 2/653 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDE-MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEP 74
L+ MYV + + +++FD + + V W+ ++S +++IG ++ F+ M +
Sbjct: 492 LVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITG 551
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
N YT+ + A+ G K IHG +Y+ G + V N LI Y K G + SA +F
Sbjct: 552 NSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLF 611
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D +R+ +SW S++S G L+ F+ V + + + + ACA +G+L
Sbjct: 612 DELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLS 671
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
+G +H K + L+++Y+KC L+ A + F + + +W++LI Y
Sbjct: 672 LGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYV 731
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
+ G +AI LF +M S G+ P + + VL A A GR +H+ I K +
Sbjct: 732 REGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLP 791
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V+N ++D Y+KC +EE+ F ++ D+VSWN +I G+ + EA++L +M E
Sbjct: 792 VSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES 851
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P+ T + +L + A+E G+ H CI++ G+ S + + +AL+DMY KCG L AR
Sbjct: 852 R-PDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHAR 910
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+FD + K+L++W M+ G HGLG EA+ + M+ IKP++ TF +L AC H G
Sbjct: 911 LLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSG 970
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
L+ EGW +FNSMI + + P+++H A +V L A G +AY I++ PI+P+ +W L
Sbjct: 971 LLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGAL 1030
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
L GC+ H D+ L AE + +P++ +++L+N+YAEA W+E K+R+ + ++ LK
Sbjct: 1031 LCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLK 1090
Query: 615 KDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
K GCSW E+Q K F ++ A Q + ++N L + + + G+ P Y+
Sbjct: 1091 KSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYA 1143
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 146/539 (27%), Positives = 269/539 (49%), Gaps = 8/539 (1%)
Query: 48 ISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL 107
I F ++G A+ R+ L+ N Y+ + + CA + GK +H + +G+
Sbjct: 425 ICKFCEVGDLRNAVELLRMSQKSELDLNAYSSI--LQLCAEHKCLQEGKMVHSVISSNGI 482
Query: 108 ELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSI-SWVSLLSSYCQCGEHVHGLKIFL 166
+ + L+ MY CG L + +FD L N + W ++S Y + G++ + +F
Sbjct: 483 PIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFK 542
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
+K G+ + ++ + +L A LG + +IH V+K V LI Y K
Sbjct: 543 KMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSG 602
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
++D A ++F + D+ +W+++I G G + A++ FV+M + T +
Sbjct: 603 EVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVA 662
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
A A+V GR LH +K FS NT+LD YSKC L ++++ F++M + VVS
Sbjct: 663 ACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVS 722
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
W +LIA ++ Y +AI L +M +G P++Y+ +++L+ + +++ G+ H I
Sbjct: 723 WTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIR 782
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
K + + +AL+DMYAKCG + +A VF + K++VSWNTM+ GY+++ L EAL+
Sbjct: 783 KNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALK 842
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
+++ MQ+ +P+ T +L AC + +E G ++R+ G S + +++ ++
Sbjct: 843 LFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRN-GYSSELHVANALIDMY 900
Query: 527 ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH--KDLVLGRYAAEKILSTDPEDTS 583
G A P E + + W ++SGC H + + + +I P++ +
Sbjct: 901 VKCGSLVHARLLFDMIP-EKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEIT 958
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 233/460 (50%), Gaps = 11/460 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N L+ Y K ++ A KLFDE+ +R+V+SW+++ISG G AL +F
Sbjct: 583 GFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFF 642
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ + + T V +V+ACA+ G G+ +HG+ ++ +N L++MY KC
Sbjct: 643 VQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKC 702
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L+ A F+ ++ +SW SL+++Y + G + +++F GV+ +S SVL
Sbjct: 703 GNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVL 762
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA +L G +H+ + K + V+ L+++YAKC ++ A VFS I + D+
Sbjct: 763 HACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIV 822
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ +IGGY++ EA+ LF +M P +T + +L A + GR +H I
Sbjct: 823 SWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCI 881
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
++ G+SS VAN ++D Y KC L + FD + E D+++W +I+G EAI
Sbjct: 882 LRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAI 941
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIE--WG---KQTHCCIVKPGFDSNVVIGSA 419
+ M G P+ T+++IL S + WG C ++P + +
Sbjct: 942 ATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHY----AC 997
Query: 420 LVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH 458
+VD+ A+ G L+ A + + + K + W +L G H
Sbjct: 998 MVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIH 1037
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ + N L+ MYVK + A+ LFD +PE+++I+W+ +ISG G+ A
Sbjct: 881 ILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEA 940
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
+ F+ M ++P+ T+ + AC+ G G M +E C+++
Sbjct: 941 IATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVD 1000
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVH 160
+ + G LS A + ++ ++ W +LL CG +H
Sbjct: 1001 LLARTGNLSKAYNLIETMPIKPDATIWGALL-----CGCRIH 1037
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/640 (32%), Positives = 350/640 (54%), Gaps = 1/640 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF-RLMVCCVL 72
N+ L + VK + + DA+ LFD++P+R+ +SW+ +ISG+ AL F ++ + L
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+ + + C + G +HG + GL + V + L++MY K G + +
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VFD RN+++W ++++ + G GL F +S V ++ A L A A G
Sbjct: 173 VFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGA 232
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L G IH+ K + + FVA L +Y KC KLD F ++ D+ +W+ ++
Sbjct: 233 LNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTA 292
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y Q+GK + F +M +S ++P+E TFS V+ A+ G QLH+ ++ +GF +
Sbjct: 293 YIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNA 352
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
VAN+++ YSKC L K F M D+++W+ +IA + + EA E L M
Sbjct: 353 LSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRS 412
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EG PN + +++L++ + +E GKQ H ++ G + ++ SAL+ MYAKCG + +
Sbjct: 413 EGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAE 472
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A K+F +++SW M+ GYA+HG +EA+E++ +Q+ ++P+ TFIGVL+AC H
Sbjct: 473 ASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSH 532
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
G+V+ G++YFNSM +D+ I+P +H ++ L G+ A I+S PI+ + VVW
Sbjct: 533 AGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWS 592
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL C+ H D+ G+ AA ++L DP HI L+N++A W E A +R +MK K
Sbjct: 593 TLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKG 652
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
+ K+ G S ++++ + F + + QG D++ ++ +L+
Sbjct: 653 VVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELA 692
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 234/467 (50%), Gaps = 16/467 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G +V + LL MY+K I + K+FDEMP RN ++W+A+I+G + G E L
Sbjct: 143 VKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGL 202
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
YF M +E + Y Y A+ A A G G+ IH + + G + NS V+N L MY
Sbjct: 203 AYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMY 262
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG L F + +SW +++++Y Q G+ GL+ F R S V +E++ +
Sbjct: 263 NKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFS 322
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+V+ CA LK G Q+H+ V VA ++ LY+KC +L S+VF +++
Sbjct: 323 AVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR 382
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ WS +I Y+Q+G EA + +M S G P+E + VL + G+QLH
Sbjct: 383 DIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLH 442
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ ++ +G + V + ++ Y+KC + E+ K F + + D++SW A+I+G+ H
Sbjct: 443 AHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQ 502
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG--------KQTHCCIVKPGFDSN 413
EAIEL +++ G P+ T+ +L S ++ G K H K +
Sbjct: 503 EAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHY--- 559
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG 459
++D+ + GRL+DA + + + + V W+T+L HG
Sbjct: 560 ----GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHG 602
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 225/464 (48%), Gaps = 11/464 (2%)
Query: 107 LELNSHVSNCL--------INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
L LN+H SN + + + K L A+ +FD +R+ +SW +++S Y +
Sbjct: 37 LTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDS 96
Query: 159 VHGLKIFLLSR-KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
L++F R +S + I F + L C + N G +H K L FV
Sbjct: 97 SEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSA 156
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
L+++Y K ++ + +VF + + W+A+I G + G + + F M S +
Sbjct: 157 LLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYD 216
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
++ L A AD GR +H+ +K GF +FVAN++ Y+KC L+ L TF
Sbjct: 217 SYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFR 276
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
+M DVVSW ++ ++ ++ K M PN YT+S +++ ++ ++W
Sbjct: 277 KMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKW 336
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
G+Q H ++ GF + + + ++++ +Y+KCG L KVF + +++++W+T++ Y+Q
Sbjct: 337 GEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQ 396
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
G G EA E S M+ KPN+ VLS C + ++E+G ++ + G+
Sbjct: 397 VGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQG-KQLHAHVLSVGLEQTSM 455
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++++ ++A G A + S + + + W ++SG H
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDS-WKDDIISWTAMISGYAEH 498
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 7/228 (3%)
Query: 279 VTFSYVLGAFADVKETIGGRQLH----SLIIKMGFSSFTFVA--NTVLDFYSKCELLEES 332
V ++ + A A K R L+ SL + FS+ +A N L K L+++
Sbjct: 9 VKRNFTVLAVAGAKTNDNPRHLYTKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDA 68
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP-NLYTYSNILNISSD 391
FD++ + D VSW +I+G++ S EA+ L M + + + S L
Sbjct: 69 RDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGL 128
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+G H VK G ++V +GSAL+DMY K G + + KVFD + ++N V+W +
Sbjct: 129 GLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAV 188
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ G + G L +S M +K++ + + L A G + G
Sbjct: 189 ITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHG 236
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+++ G + + L++MY K I +A K+F + + ++ISW+A+ISG+++ G + A
Sbjct: 445 VLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEA 504
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS------ 114
+ F + L P+ T++G ++AC + +G G Y + + + H++
Sbjct: 505 IELFENIQKVGLRPDSVTFIGVLTAC-----SHAGMVDLGFYYFNSMSKDYHITPSKEHY 559
Query: 115 NCLINMYGKCGLLSSAQ-FVFDASLERNSISWVSLLSSYCQ------CGEHVHGLKIFLL 167
C+I++ + G L A+ + ++ + + W +LL + C+ CG+ + L
Sbjct: 560 GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRA-CRIHGDVDCGQRAAAEVLKLD 618
Query: 168 SRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV 203
+G I+ + + G N+++ M+ +V
Sbjct: 619 PNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVV 654
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/670 (32%), Positives = 354/670 (52%), Gaps = 9/670 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V N LL MY K + DA ++F++MPE +++SW+ +ISGF + +L +F
Sbjct: 139 GVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFF 198
Query: 65 RLMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
R MV + PN V ++ +C+S G+EIHG + +SGL++ ++ + LI MY K
Sbjct: 199 RSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMK 258
Query: 124 CGLLSSAQFVFDA-----SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
CG + +A+ +F++ S+ RN++ W ++S Y G L +F+ G+
Sbjct: 259 CGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYS 318
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S+ C+ ++ G QIH L+FK L+ + V L+++Y KC + ++F
Sbjct: 319 TMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRS 378
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFADVKETIGG 297
Q +L WSA+I AQ G +A++LF + GL S + + VL A + + G
Sbjct: 379 QNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVA-VLRACSSLTLKPEG 437
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
Q+H L KMGF S FV + ++D Y+KC + S K F + + D+VSWNALI+G+
Sbjct: 438 MQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQD 497
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA++ +DM E PN T + IL++ + + + K+ H +++ G S V++
Sbjct: 498 ECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVS 557
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
++L+ YAKCG +N + F+ + +N VSWN++++G H E + ++ M + IK
Sbjct: 558 NSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIK 617
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ TF +LSAC H G V+EG YF SM+ D + P+++ +V L G +AY+
Sbjct: 618 PDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYD 677
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
I + P P+ +W LL CK H D +L A I P ++L+N+Y
Sbjct: 678 LIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGK 737
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
E +KVR +K+ LKK GCSW E+ N H F + Q +++ + L+ +
Sbjct: 738 GREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHIFIAGDRSHSQSDEIYAAVESLTTEIKR 797
Query: 658 GGYVPDPIYS 667
GY+P IYS
Sbjct: 798 AGYIPQ-IYS 806
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 142/477 (29%), Positives = 237/477 (49%), Gaps = 8/477 (1%)
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
D G++IHG + + G+ + V N L+ MY KCG++ A +F+ E + +SW +++S
Sbjct: 124 DVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMIS 183
Query: 151 SYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ + ++ L F + + G+ + +C S + +C+ L +L G +IH +V K L+
Sbjct: 184 GFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLD 243
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD-----LTAWSALIGGYAQLGKACEAID 264
++++ LI +Y KC + A +F++I D W+ +I GY G +A+
Sbjct: 244 VEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALL 303
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
LF+KM G+ P T + ++ + G+Q+H LI K G + V +LD Y
Sbjct: 304 LFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYL 363
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
KC + LK F H+++ W+A+I+ S +A+EL + E +
Sbjct: 364 KCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVA 423
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
+L S + G Q H K GF S+V +GSALVD+YAKC + ++KVF LS K+
Sbjct: 424 VLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKD 483
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
LVSWN ++ GYAQ EAL+ + MQ +I+PN T +LS C H+ ++
Sbjct: 484 LVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHG 543
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+IR G+ + S++ +A G + + P E N V W ++ G H
Sbjct: 544 YLIR-QGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMP-ERNDVSWNSIILGMGMH 598
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 183/361 (50%), Gaps = 18/361 (4%)
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
C+L F KF N K L++++ + + + + + +I Y + G +AI +
Sbjct: 43 CSLRFQKFN----YNPIQKWSSKPLSTKIQTFVSV---SFANNVIREYTEDGFFDDAIGV 95
Query: 266 FVKMFSSGLMPSEVT-FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
++KM G+ E F ++ AF + + GRQ+H ++K+G V N++L Y
Sbjct: 96 YLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYW 155
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE-GHCPN-LYTY 382
KC ++E++++ F++M E D+VSWN +I+G S Y ++ + M++E G PN +
Sbjct: 156 KCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACV 215
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
S+IL+ SS + ++ G++ H +VK G D + S+L++MY KCG + +A +F+ +
Sbjct: 216 SSILSCSS-LQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILD 274
Query: 443 K-----NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
K N V WN M+ GY +G +AL ++ M IKP+ +T + + S C +
Sbjct: 275 KDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIA 334
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G + +I G+ + +++ ++ G + + S N ++W ++S
Sbjct: 335 FG-KQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQ-NHNLIMWSAVISN 392
Query: 558 C 558
C
Sbjct: 393 C 393
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G V+ N L+ Y K IN + F++MPERN +SW+++I G +
Sbjct: 545 LIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEM 604
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
+ F MV ++P++ T+ +SAC+ G G + M L+ C+++
Sbjct: 605 IVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVD 664
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHV 159
+ G+ G L+ A + + W SLL S G+ +
Sbjct: 665 LLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEI 705
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/653 (32%), Positives = 354/653 (54%), Gaps = 9/653 (1%)
Query: 12 TYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
T N+L+ Y K + +N A ++FDEMP R+ +SW+A+IS F+ G + M
Sbjct: 30 TANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDLDTTWQLLGAMRRST 89
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ T+ + A G + G+++H M + GL N + L++MY KCG +
Sbjct: 90 HAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGY 149
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VF + ERN +SW +L++SY + G+ + GV I + + + +L
Sbjct: 150 VVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDDGTVSPLLTLLDNAM 209
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALI 250
K+ MQ+H + K LE V I Y++C L A RVF L DL W++++
Sbjct: 210 FYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDGAVLCRDLVTWNSML 269
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
G Y K A +F+ M + G P T++ ++GA + + G+ LH L+IK G
Sbjct: 270 GAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLD 329
Query: 311 SFTFVANTVLDFY----SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
+ V+N ++ Y +C +E++L+ F MD D +WN+++AG++ +A+ L
Sbjct: 330 NSVPVSNALISMYIRFNDRC--MEDALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRL 387
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M + YT+S ++ SD+ ++ G+Q H +K GFD+N +GS+L+ MY+K
Sbjct: 388 FLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSK 447
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + DARK F+ S N + WN+++ GYAQHG G AL+++ MM+E K+K + TF+ V
Sbjct: 448 CGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAV 507
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L+AC H GLVEEG ++ SM D GI PR +H A + L+ G ++A +++ P EP
Sbjct: 508 LTACSHNGLVEEGCNFIESMESDFGIPPRQEHYACAIDLYGRAGHLKKATALVETMPFEP 567
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+ +V + LL C+ D+ L A+ +L +PE+ +++LS +Y MW E A V +
Sbjct: 568 DAMVLKTLLGACRFCGDIELASQIAKILLELEPEEHCTYVILSEMYGRFKMWGEKASVTR 627
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS--VHLFD 657
+M+E+ +KK G SW E++N +H F+ + Q +++ ++ QL+ + LFD
Sbjct: 628 MMRERGVKKVPGWSWIEVKNNVHAFNAEDHSHPQCEEIYILLQQLNEGIKLFD 680
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 232/466 (49%), Gaps = 5/466 (1%)
Query: 99 HGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
H R + G + + +N LI Y KC L+SA VFD R+++SW +++S++ G+
Sbjct: 16 HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDL 75
Query: 159 VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
++ R+S A + S+L A +G LK+G Q+HS++ K L + F L
Sbjct: 76 DTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSAL 135
Query: 219 INLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE 278
+++YAKC ++D VF ++ + +W+ L+ Y+++G A + M G+ +
Sbjct: 136 LDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDD 195
Query: 279 VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD- 337
T S +L + QLH I+K G F V N + YS+C L+++ + FD
Sbjct: 196 GTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDG 255
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
+ D+V+WN+++ +L A ++ DM G P+ YTY+ I+ S
Sbjct: 256 AVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKTC 315
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR--LNDARKVFDHLSSKNLVSWNTMLVGY 455
GK H ++K G D++V + +AL+ MY + + DA ++F + K+ +WN++L GY
Sbjct: 316 GKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILAGY 375
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
Q GL +AL ++ M+ I+ + TF V+ +C + ++ G F+ + G
Sbjct: 376 VQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLG-QQFHVLALKVGFDTN 434
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+S++ +++ G A + +++ + N +VW ++ G H
Sbjct: 435 SYVGSSLIFMYSKCGIIEDARKSFEATS-KDNAIVWNSIIFGYAQH 479
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 229/453 (50%), Gaps = 22/453 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ G NV + + LL MY K R++D +F MPERN +SW+ L++ +S++G ++A
Sbjct: 120 MLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMA 179
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDA----RSGKEIHGRMYRSGLELNSHVSNC 116
F ++ C LE G VS + D + ++H ++ + GLEL + V N
Sbjct: 180 ---FWVLSCMELE-GVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNA 235
Query: 117 LINMYGKCGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
I Y +C L A+ VFD A L R+ ++W S+L +Y + K+FL + G
Sbjct: 236 TITAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEP 295
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK--LDLASR 233
++ ++GAC+V + G +H LV K L+ V+ LI++Y + ++ A R
Sbjct: 296 DAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALR 355
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+F ++ L D W++++ GY Q+G + +A+ LF++M + TFS V+ + +D+
Sbjct: 356 IFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLAT 415
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+Q H L +K+GF + ++V ++++ YSKC ++E++ K+F+ + + + WN++I G
Sbjct: 416 LQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFG 475
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ A++L M + T+ +L S +E G C +S+
Sbjct: 476 YAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEG-----CNFIESMESD 530
Query: 414 VVIG------SALVDMYAKCGRLNDARKVFDHL 440
I + +D+Y + G L A + + +
Sbjct: 531 FGIPPRQEHYACAIDLYGRAGHLKKATALVETM 563
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
THC +K G ++ + L+ YAKC LN A +VFD + ++ VSWN ++ +A G
Sbjct: 15 THCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGD 74
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
++ M+ + + TF +L ++G ++ G + M++ G+S + +
Sbjct: 75 LDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLK-VGLSENVFSGS 133
Query: 521 SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+++ ++A G+ Y +S P E N V W L++
Sbjct: 134 ALLDMYAKCGRVDDGYVVFQSMP-ERNYVSWNTLVA 168
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N + L+ MY K I DA+K F+ + N I W+++I G++Q G +AL+ F
Sbjct: 430 GFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLF 489
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINMYGK 123
+M ++ ++ T+V ++AC+ G G M G+ C I++YG+
Sbjct: 490 YMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQEHYACAIDLYGR 549
Query: 124 CGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGE 157
G L A + + E +++ +LL + CG+
Sbjct: 550 AGHLKKATALVETMPFEPDAMVLKTLLGACRFCGD 584
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 344/627 (54%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G ++ + L+ MY ++ A+++FD M ER+ + W+ ++ G+ + G A+ F
Sbjct: 177 GLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLF 236
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R+M +PN+ T +S CA+ D SG ++H + GLE V+N L++MY KC
Sbjct: 237 RVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKC 296
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L A +F + ++W ++S Q G L++F +KSG+ + AS+L
Sbjct: 297 QCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLL 356
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A L K G +IH + + D F+ L+++Y KC + +A VF + D+
Sbjct: 357 PALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVV 416
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
S +I GY + A+ +F + + G+ P+ V + L A A + G++LH +
Sbjct: 417 IGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYV 476
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K + +V + ++D YSKC L+ S F +M D V+WN++I+ + EA+
Sbjct: 477 LKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEAL 536
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L + M+ EG N T S+IL+ + +PAI +GK+ H I+K +++ SAL+DMY
Sbjct: 537 DLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMY 596
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG L A +VF+H+ KN VSWN+++ Y HGL +E++++ MQE K + TF+
Sbjct: 597 GKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFL 656
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
++SAC H G V+EG F M ++ I P+++H++ +V L++ G+ +A +FI P
Sbjct: 657 ALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPF 716
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+P+ +W LL C+ H+++ L A++++ DP + ++++SN+ A A WD +K+
Sbjct: 717 KPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKM 776
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYF 631
R++MK+K ++K G SW ++ N H F
Sbjct: 777 RRLMKDKKVQKIPGYSWVDVNNTSHLF 803
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/559 (29%), Positives = 282/559 (50%), Gaps = 19/559 (3%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNV---ISWSALISGFSQIGMPEVALNYFRLMVC- 69
L+ MYV R DA +F +P + W+ LI GF+ G +A+ ++ M
Sbjct: 80 TRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAH 139
Query: 70 -CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
P+ +T V +CA+ G G+ +H GL+ + +V + LI MY GLL
Sbjct: 140 PSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLD 199
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ VFD ER+ + W ++ Y + G+ + +F + R SG + + A L CA
Sbjct: 200 GAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCA 259
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+L G+Q+H+L K LE + VA L+++YAKC+ L+ A R+F + DL W+
Sbjct: 260 AEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNG 319
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I G Q G +A+ LF M SGL P VT + +L A ++ G+++H I++
Sbjct: 320 MISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNC 379
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F+ + ++D Y KC + + FD DVV + +I+G++ + A+++ +
Sbjct: 380 AHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFR 439
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+L G PN ++ L + + A+ G++ H ++K ++ + SAL+DMY+KCG
Sbjct: 440 YLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCG 499
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
RL+ + +F +S+K+ V+WN+M+ +AQ+G EAL+++ M +K N+ T +LS
Sbjct: 500 RLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILS 559
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGI---SP-RMDHIA--SVVHLFACRGQTRRAYEFIKSS 542
AC + + Y+ I HGI P R D A +++ ++ G A +
Sbjct: 560 ACAGLPAI-----YYGKEI--HGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHM 612
Query: 543 PIEPNKVVWRCLLSGCKTH 561
P E N+V W ++S H
Sbjct: 613 P-EKNEVSWNSIISAYGAH 630
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 203/437 (46%), Gaps = 12/437 (2%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL-----ELNSHVSNCLINMYGKCGLLS 128
P Y + + C + G IH R SGL + + L+ MY
Sbjct: 34 PCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFR 93
Query: 129 SAQFVFDASLER----NSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCAS 182
A VF +SL R ++ W L+ + G H + + + + S +
Sbjct: 94 DAVAVF-SSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPY 152
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
V+ +CA LG L +G +H L+ D +V LI +YA LD A VF + D
Sbjct: 153 VVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERD 212
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
W+ ++ GY + G A+ LF M +SG P+ T + L A + + G QLH+
Sbjct: 213 CVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHT 272
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
L +K G VANT++ Y+KC+ LEE+ + F M D+V+WN +I+G + + +
Sbjct: 273 LAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDD 332
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+ L DM G P+ T +++L +++ + GK+ H IV+ +V + SALVD
Sbjct: 333 ALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVD 392
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
+Y KC + A+ VFD S ++V +TM+ GY + + A++++ + IKPN
Sbjct: 393 IYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVM 452
Query: 483 FIGVLSACVHIGLVEEG 499
L AC + + G
Sbjct: 453 VASTLPACASMAAMRIG 469
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/649 (32%), Positives = 353/649 (54%), Gaps = 1/649 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N +L M V+F A ++F +MPER+V SW+ ++ G+ + G+ + AL+ + M+ +
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVR 186
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT+ + +C D R G+E+H + R G V N L+ MY KCG + +A+ V
Sbjct: 187 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKV 246
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD+ + ISW ++++ + + GE GL++FL V + + SV A +L ++
Sbjct: 247 FDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDV 306
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++H L K D LI +YA + A VFS + D W+A+I GY
Sbjct: 307 TFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGY 366
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G +A++++ M + + P ++T + L A A + G +LH L GF S+
Sbjct: 367 EKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYI 426
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V N +L+ Y+K + ++++++ F M E DVVSW+++IAG + EA+ + ML +
Sbjct: 427 VVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD 486
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN T+ L + A+ GK+ H +++ G + + +AL+D+Y KCG+ A
Sbjct: 487 VK-PNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYA 545
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
F +K++VSWN M+ G+ HG G AL ++ M + P++ TF+ +L AC
Sbjct: 546 WAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRG 605
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G+V EGW F+SM + I P + H A +V L + GQ AY FI PI P+ VW
Sbjct: 606 GMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGA 665
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL+GC+ H+ + LG AA+ +L+ +P D H++L ++YA+A +WD+ A+VRK M+EK L
Sbjct: 666 LLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKGL 725
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
D+GCSW E++ +H F T + Q +++ V+ + + GY P
Sbjct: 726 DHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAP 774
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 216/456 (47%), Gaps = 3/456 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF V N L+ MY K + A+K+FD M + ISW+A+I+G + G L F
Sbjct: 219 GFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELF 278
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ ++PN T A D KE+HG + G + N LI MY
Sbjct: 279 LTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASL 338
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G++ A+ VF R++++W +++S Y + G L+++ L + V+ + + AS L
Sbjct: 339 GMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASAL 398
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA LG+L VG+++H L V ++ +YAK +++D A VF + D+
Sbjct: 399 AACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVV 458
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+WS++I G+ + EA+ F M + + P+ VTF L A A G+++H+ +
Sbjct: 459 SWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHV 517
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
++ G ++ N ++D Y KC + F DVVSWN +IAG +A H A+
Sbjct: 518 LRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTAL 577
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALVDM 423
M+ G CP+ T+ +L S + G + H K N+ + +VD+
Sbjct: 578 SFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDL 637
Query: 424 YAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
++ G+L +A + + + + W +L G H
Sbjct: 638 LSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIH 673
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 199/411 (48%), Gaps = 1/411 (0%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YV C R G + N +++M + G A V
Sbjct: 86 PDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRV 145
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F ER+ SW ++ Y + G L ++ +GV ++ VL +C + +
Sbjct: 146 FAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDW 205
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G ++H+ V + + V L+ +YAKC + A +VF ++ + D +W+A+I G+
Sbjct: 206 RMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGH 265
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G+ ++LF+ M + P+ +T + V A + + +++H L +K GF+
Sbjct: 266 FENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDV 325
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
N+++ Y+ ++ ++ F MD D ++W A+I+G+ + +A+E+ M
Sbjct: 326 AFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVN 385
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
P+ T ++ L + + +++ G + H GF S +V+ +A+++MYAK R++ A
Sbjct: 386 NVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKA 445
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+VF + K++VSW++M+ G+ + EAL + M + +KPN TFI
Sbjct: 446 IEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFI 495
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 169/359 (47%), Gaps = 13/359 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF +V N L+ MY + A+ +F M R+ ++W+A+ISG+ + G P+ AL
Sbjct: 317 VKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKAL 376
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ LM + P+ T A++ACA G G ++H G V+N ++ MY
Sbjct: 377 EVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMY 436
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K + A VF E++ +SW S+++ +C + L F + V + +
Sbjct: 437 AKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYF-RHMLADVKPNSVTFI 495
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ L ACA G L+ G +IH+ V +C +E++ ++ LI+LY KC + A F
Sbjct: 496 AALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAK 555
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL- 300
D+ +W+ +I G+ G A+ F +M G P EVTF +L A + G +L
Sbjct: 556 DVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELF 615
Query: 301 HSLIIKMGFSSFTFVAN-----TVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
HS+ K ++ V N ++D S+ L E+ +EM D W AL+ G
Sbjct: 616 HSMTEK-----YSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNG 669
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/693 (30%), Positives = 363/693 (52%), Gaps = 41/693 (5%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V ++N ++ Y ++ DA LF +MP+RN+++W+ +ISG+ +I + FR+M
Sbjct: 156 DVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMH 215
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK-CGLL 127
P+ + +SA D + + + ++G E + + ++N+Y + L
Sbjct: 216 HEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASAL 275
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A FD +ERN +W +++++ G + ++ + S+ + + L C
Sbjct: 276 DIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIP-SQTALLTGLARC 334
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ ++ +F+ + +I Y + +D A +F + + +W+
Sbjct: 335 GRITEARI-------LFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWA 387
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+I GYAQ G++ EA+DL + +G++PS + + A + + GRQ+HSL +K
Sbjct: 388 GMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKA 447
Query: 308 GFSSFTFVANTVLDFYSKCE-------------------------------LLEESLKTF 336
G ++V N ++ Y KC +LE++ F
Sbjct: 448 GCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIF 507
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
D M DVVSW +I+ + + EA+E K ML E PN + +L++ + + +
Sbjct: 508 DNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAK 567
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G+Q H +K G DS +++ +AL+ MY KCG D+ KVFD + +++ +WNT + G A
Sbjct: 568 LGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSMEERDIFTWNTFITGCA 626
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
QHGLGREA+++Y M+ + PN+ TF+G+L+AC H GLV+EGW +F SM RD+G++P +
Sbjct: 627 QHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLL 686
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
+H A +V L G + A +FI PIEP+ V+W LL CK HK+ +GR AAEK+ +
Sbjct: 687 EHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFT 746
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRF 636
T+P + ++MLSN+Y+ MW E A++RKIMK++ + K+ GCSW +++NK+H F T
Sbjct: 747 TEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDK 806
Query: 637 AQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ ++ + L L GYVPD + H
Sbjct: 807 QHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLH 839
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 152/615 (24%), Positives = 268/615 (43%), Gaps = 91/615 (14%)
Query: 22 KFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVG 81
+ R+ +A+++FD MP R++I+W+++IS + GM E A R++ + N T
Sbjct: 45 RLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDA----RILFDAISGGNVRTATI 100
Query: 82 AVSACASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFVFDASL-- 138
+S G AR G+ + R G+ E N+ N +++ Y + G ++ A+ +FDA
Sbjct: 101 LLS-----GYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSR 155
Query: 139 -----------------------------ERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
+RN ++W ++S Y + +H G IF +
Sbjct: 156 DVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMH 215
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK-CEKL 228
G + + + ASVL A L +L V + LV K E D + ++N+Y + L
Sbjct: 216 HEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASAL 275
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
D+A + F + + WS +I + G+ ID + ++ + S + + +L
Sbjct: 276 DIAIKFFDGMVERNEYTWSTMIAALSHGGR----IDAAIAVYGRDPVKSIPSQTALLTGL 331
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
A R L I S+ N ++ Y + +++E+ + FD M + +SW
Sbjct: 332 ARCGRITEARILFEQIPDPIVVSW----NAMITGYMQNGMVDEAKELFDRMPFRNTISWA 387
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
+IAG+ + EA++LL+ + G P+L + ++ S I A+E G+Q H VK
Sbjct: 388 GMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKA 447
Query: 409 GFDSNVVIGSALVDMYAKC-------------------------------GRLNDARKVF 437
G N + +AL+ MY KC L DAR +F
Sbjct: 448 GCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIF 507
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D++ S+++VSW T++ YAQ G EA+E + M KPN +LS C +G +
Sbjct: 508 DNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAK 567
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHL-FACR-GQTRRAYEFIKSSPIEPNKVVWRCLL 555
G I+ HG+ + +++ + F C + + ++ ++ I W +
Sbjct: 568 LGQQIHTVAIK-HGMDSELIVANALMSMYFKCGCADSHKVFDSMEERDI----FTWNTFI 622
Query: 556 SGCKTHKDLVLGRYA 570
+GC H LGR A
Sbjct: 623 TGCAQHG---LGREA 634
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 202/421 (47%), Gaps = 41/421 (9%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P V+++N ++ Y++ +++A++LFD MP RN ISW+ +I+G++Q G E AL+ + +
Sbjct: 350 PIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQAL 409
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC--- 124
+ P+ + + AC+ G +G+++H ++G + NS+V N LI+MYGKC
Sbjct: 410 HRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNM 469
Query: 125 ----------------------------GLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
+L A+ +FD L R+ +SW +++S+Y Q
Sbjct: 470 EYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAE 529
Query: 157 EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
++ F + +L C LG+ K+G QIH++ K ++ + VA
Sbjct: 530 RGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVAN 589
Query: 217 GLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
L+++Y KC D + +VF +++ D+ W+ I G AQ G EAI ++ M S G++P
Sbjct: 590 ALMSMYFKCGCAD-SHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLP 648
Query: 277 SEVTFSYVLGAFADVKETIGGRQ-LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK- 334
+EVTF +L A + G Q S+ G + ++D + ++ + K
Sbjct: 649 NEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKF 708
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK---DMLFEGHCPNLYTYSNILNISSD 391
+D E D V W+AL L +C + E+ + + LF N Y + NI S
Sbjct: 709 IYDMPIEPDTVIWSAL----LGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSS 764
Query: 392 I 392
+
Sbjct: 765 L 765
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/551 (21%), Positives = 234/551 (42%), Gaps = 73/551 (13%)
Query: 109 LNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLS 168
L+ + I + G L A+ VFDA R+ I+W S++S+YC G +
Sbjct: 31 LDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSG----------ML 80
Query: 169 RKSGVAISEFSCASVLGACAVL-GNLKVGMQIHS-LVFKCALEFDKFVAMGLINLYAKCE 226
+ + S +V A +L G ++G + + VF E + +++ Y +
Sbjct: 81 EDARILFDAISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNG 140
Query: 227 KLDLASRVFSNI-----------------------------QLP--DLTAWSALIGGYAQ 255
+ +A R+F + Q+P +L W+ +I GY +
Sbjct: 141 DITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVR 200
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
+ + + D+F M G P + F+ VL A +++ L L++K GF S +
Sbjct: 201 IEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVI 260
Query: 316 ANTVLDFYSK-CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
++L+ Y++ L+ ++K FD M E + +W+ +IA A H G +
Sbjct: 261 GTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIA---ALSHGGRIDAAIA------ 311
Query: 375 HCPNLYTYSNILNISSDIPAI----EWGKQTHCCIVKPGFDSNVVIG-SALVDMYAKCGR 429
+Y + +I S + G+ T I+ +V+ +A++ Y + G
Sbjct: 312 ----VYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGM 367
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+++A+++FD + +N +SW M+ GYAQ+G EAL++ + N + P+ ++ A
Sbjct: 368 VDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLA 427
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQ--TRRAYEFIKSSPIEP 546
C HIG +E G +S+ G +++ ++ CR R+ + ++
Sbjct: 428 CSHIGALETG-RQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVK---- 482
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+ V W ++ + L R+ + +LS D + + + YA+A DE + K
Sbjct: 483 DTVSWNSFIAALVQNNMLEDARHIFDNMLS---RDVVSWTTIISAYAQAERGDEAVEFFK 539
Query: 607 IMKEKSLKKDT 617
M + K ++
Sbjct: 540 TMLHEHEKPNS 550
>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 783
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/660 (29%), Positives = 365/660 (55%), Gaps = 37/660 (5%)
Query: 12 TYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
T+N +++ Y R++DA+KLF P +N ISW+ALISG+ + G A N F M
Sbjct: 61 TWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDG 120
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
++PN YT + C S G++IHG ++G +L+ +V N L+ MY +C +S A+
Sbjct: 121 IKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAE 180
Query: 132 FVFDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
++F+ E+N+++W S+L+ Y Q G ++ F R+ G ++++ SVL ACA +
Sbjct: 181 YLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASV 240
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
+VG+Q+H + K + + +V LI++YAKC +++ A + +++ D+ +W+++I
Sbjct: 241 SACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMI 300
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQLHSLIIKMGF 309
G + G EA+ +F +M + + T +L FA + + H LI+K G+
Sbjct: 301 VGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGY 360
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
+++ V N ++D Y+K +++ +LK F+ M E DV+SW AL+ G+ + Y EA++L +
Sbjct: 361 ATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCN 420
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M G P+ +++L+ S+++ +E+G+Q H +K GF S++ + ++LV MY KCG
Sbjct: 421 MRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGS 480
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L DA +F+ + ++L++W ++VGYA++
Sbjct: 481 LEDANVIFNSMEIRDLITWTCLIVGYAKN------------------------------- 509
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
GL+E+ YF+SM +GI+P +H A ++ LF G + + + +EP+
Sbjct: 510 ----GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDAT 565
Query: 550 VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK 609
VW+ +L+ + H ++ G AA+ ++ +P + ++ LSN+Y+ A DE A VR++MK
Sbjct: 566 VWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMK 625
Query: 610 EKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+++ K+ GCSW E + K+H F + + ++++ ++++ + + + GY D ++ H
Sbjct: 626 SRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALH 685
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 151/533 (28%), Positives = 253/533 (47%), Gaps = 31/533 (5%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQIGMPEVA 60
I +GF +V N LL MY + RI++A+ LF+ M E+N ++W+++++G+SQ G A
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKA 211
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ FR + + N YT+ ++ACAS R G ++H + +SG + N +V + LI+M
Sbjct: 212 IECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDM 271
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + SA+ + + + +SW S++ + G L +F + + I +F+
Sbjct: 272 YAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTI 331
Query: 181 ASVLGACAV-LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L A+ +K+ H L+ K K V L+++YAK +D A +VF +
Sbjct: 332 PSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMI 391
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +W+AL+ G G EA+ LF M G+ P ++ + VL A A++ G+Q
Sbjct: 392 EKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQ 451
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H IK GF S V N+++ Y+KC LE++ F+ M+ D+++W LI G+ +
Sbjct: 452 VHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGL 511
Query: 360 YGEAIELLKDM-LFEGHCPNLYTYSNILNI---SSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+A M G P Y+ ++++ S D +E + H V+P +
Sbjct: 512 LEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVE--QLLHQMEVEP----DAT 565
Query: 416 IGSALVDMYAKCGRLND---ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+ A++ K G + + A K L N V + + Y+ G EA + +M+
Sbjct: 566 VWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMK 625
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGW--HYFNSMIRDHGISPRMDHIASVV 523
I C VEE H F S R H PRM I S V
Sbjct: 626 SRNISKE--------PGC---SWVEEKGKVHSFMSEDRRH---PRMVEIYSKV 664
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 219/432 (50%), Gaps = 18/432 (4%)
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSL--VFKCALEFDKFVAMGLINLYAKCEKLD 229
G I ++ + L + +LG+L ++ +F E D+F +I Y+ +L
Sbjct: 17 GSCIHSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLS 76
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A ++F + + + +W+ALI GY + G EA +LF +M S G+ P+E T VL
Sbjct: 77 DAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCT 136
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWN 348
+ + G Q+H IK GF V N +L Y++C+ + E+ F+ M+ E + V+W
Sbjct: 137 SLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWT 196
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
+++ G+ + +AIE +D+ EG+ N YT+ ++L + + A G Q HCCIVK
Sbjct: 197 SMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS 256
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
GF +N+ + SAL+DMYAKC + AR + + + ++VSWN+M+VG + GL EAL ++
Sbjct: 257 GFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMF 316
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVE-EGWHYFNSMIRDHGISPRMDHIASVVHLFA 527
M E +K +D T +L+ C + E + + +I G + ++V ++A
Sbjct: 317 GRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYA 375
Query: 528 CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK-----------DLVLGRYAAEKILS 576
RG A + + IE + + W L++G TH ++ +G +KI++
Sbjct: 376 KRGIMDSALKVFEGM-IEKDVISWTALVTG-NTHNGSYDEALKLFCNMRVGGITPDKIVT 433
Query: 577 TDPEDTSAHIML 588
SA + L
Sbjct: 434 ASVLSASAELTL 445
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 181/375 (48%), Gaps = 8/375 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF N+ + L+ MY K + A+ L + M +V+SW+++I G + G+ A
Sbjct: 253 IVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEA 312
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACA-SRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L+ F M ++ + +T ++ A SR + + H + ++G V+N L++
Sbjct: 313 LSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVD 372
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY K G++ SA VF+ +E++ ISW +L++ G + LK+F R G+ +
Sbjct: 373 MYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIV 432
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
ASVL A A L L+ G Q+H K V L+ +Y KC L+ A+ +F++++
Sbjct: 433 TASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME 492
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS-GLMPSEVTFSYVLGAFADVKETIGGR 298
+ DL W+ LI GYA+ G +A F M + G+ P ++ ++ F + +
Sbjct: 493 IRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFV--- 549
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSK---CELLEESLKTFDEMDEHDVVSWNALIAGHL 355
++ L+ +M V +L K E E + KT E++ ++ V + L +
Sbjct: 550 KVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYS 609
Query: 356 ASCHYGEAIELLKDM 370
A+ EA + + M
Sbjct: 610 AAGRQDEAANVRRLM 624
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/640 (33%), Positives = 353/640 (55%), Gaps = 6/640 (0%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A+ LFD++P + ++ALI +S G Y L + +PN YT+ + AC++
Sbjct: 82 ARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSA 141
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
D RS + +H R+GL + VS L+++Y KC A VF R+ ++W ++
Sbjct: 142 LLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAM 201
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSL-VFKCA 207
L+ Y G++ + LL + A + + ++L A G L G +H+ V C+
Sbjct: 202 LAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHGALSQGRAVHAYSVRACS 260
Query: 208 LEFDK---FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
L K V L+++YAKC L ASRVF + + + WSAL+GG+ G+ EA
Sbjct: 261 LHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFS 320
Query: 265 LFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
LF M + GL S + + L A A++ + G+QLH+L+ K G + N++L Y
Sbjct: 321 LFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMY 380
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+K L++++ FD+M D VS++AL++G++ + EA + + M P++ T
Sbjct: 381 AKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMV 440
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+++ S + A++ GK H ++ G S I +AL+DMYAKCGR++ +R++FD + ++
Sbjct: 441 SLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPAR 500
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
++VSWNTM+ GY HGLG+EA ++ M+ +P+D TFI ++SAC H GLV EG +F
Sbjct: 501 DIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWF 560
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+ M +GI+PRM+H +V L A G AY+FI+ P++ + VW LL C+ HK+
Sbjct: 561 HMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKN 620
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
+ LG+ + I PE T ++LSN+++ A +DE A+VR I KE+ KK GCSW E
Sbjct: 621 IDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIE 680
Query: 624 LQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ +H F + Q ++++ ++ + V + GY D
Sbjct: 681 INGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRAD 720
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 234/483 (48%), Gaps = 20/483 (4%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G H ++ L+ +Y K + A +F MP R+V++W+A+++G++ G Y
Sbjct: 158 AGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHG------KY 211
Query: 64 FRLMVCCVL-----EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH-----V 113
+ C +L PN T V + A G G+ +H R+ L+ H V
Sbjct: 212 SDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRA-CSLHDHKDGVLV 270
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
L++MY KCG L A VF+A RN ++W +L+ + CG + +F G+
Sbjct: 271 GTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGL 330
Query: 174 A-ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+S S AS L ACA L +L +G Q+H+L+ K L D L+++YAK +D A+
Sbjct: 331 CFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQAT 390
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
+F + + D ++SAL+ GY Q GKA EA +F KM + + P T ++ A + +
Sbjct: 391 TLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLA 450
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
G+ H +I G +S T + N ++D Y+KC ++ S + FD M D+VSWN +IA
Sbjct: 451 ALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIA 510
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-THCCIVKPGFD 411
G+ EA L DM + P+ T+ +++ S + GK+ H K G
Sbjct: 511 GYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGIT 570
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSM 470
+ +VD+ A+ G L++A + + K ++ W +L H ++ SM
Sbjct: 571 PRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSM 630
Query: 471 MQE 473
+Q+
Sbjct: 631 IQQ 633
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 40/237 (16%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G N L+ MY K RI+ ++++FD MP R+++SW+ +I+G+ G+ + A
Sbjct: 462 VIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEA 521
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE-IHGRMYRSGLELNSHVSNCLIN 119
F M EP+ T++ +SAC+ G GK H ++ G+ +++
Sbjct: 522 TALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVD 581
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+ + G L A QF+ L+ + W +L
Sbjct: 582 LLARGGFLDEAYQFIQGMPLKADVRVWGAL------------------------------ 611
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALE-FDKFVAMGLINLYAKCEKLDLASRV 234
LGAC V N+ +G Q+ S++ + E FV + N+++ + D A+ V
Sbjct: 612 -----LGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLS--NIFSAAGRFDEAAEV 661
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/649 (32%), Positives = 352/649 (54%), Gaps = 1/649 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N +L M V+F A ++F +MPER+V SW+ ++ G+ + G+ E AL+ + M+ +
Sbjct: 133 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVR 192
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT+ + +C D R G+E+H + R G V N L+ MY KCG + +A+ V
Sbjct: 193 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKV 252
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD+ + ISW ++++ + + GE GL++FL + V + + SV A +L ++
Sbjct: 253 FDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDI 312
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++H L K D LI +YA + A VFS + D +W+A+I GY
Sbjct: 313 TFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGY 372
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G +A++++ M + + P ++T + L A A + G +LH L GF S+
Sbjct: 373 EKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYV 432
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V N +L+ Y+K + ++++++ F M E DVVSW+++IAG + EA+ + ML +
Sbjct: 433 VVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD 492
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN T+ L + A+ GK+ H +++ G + +AL+D+Y KCG+ A
Sbjct: 493 VK-PNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYA 551
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
F +K++VSWN M+ G+ HG G AL ++ M + P++ TF+ +L AC
Sbjct: 552 WAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRG 611
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G+V EGW F+SM + I P + H A +V L + GQ AY FI PI P+ VW
Sbjct: 612 GMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGA 671
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL+GC+ H+ + LG AA+ +L +P D H++L ++YA+A +WD+ A+VRK M+EK L
Sbjct: 672 LLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKGL 731
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
D+GCSW E++ +H F T + Q +++ V+ + + G P
Sbjct: 732 DHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAP 780
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 217/456 (47%), Gaps = 3/456 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF V N L+ MY K + A+K+FD M + ISW+A+I+G + G L F
Sbjct: 225 GFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELF 284
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ ++PN T A D KE+HG + G + N LI MY
Sbjct: 285 LTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASL 344
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G++ A+ VF R+++SW +++S Y + G L+++ L + V+ + + AS L
Sbjct: 345 GMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASAL 404
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA LG+L VG+++H L V L+ +YAK +++D A VF + D+
Sbjct: 405 AACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVV 464
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+WS++I G+ + EA+ F M + + P+ VTF L A A G+++H+ +
Sbjct: 465 SWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHV 523
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
++ G + ++ N ++D Y KC + F DVVSWN +IAG +A + A+
Sbjct: 524 LRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETAL 583
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALVDM 423
M+ G CP+ T+ +L S + G + H K N+ + +VD+
Sbjct: 584 SFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDL 643
Query: 424 YAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
++ G+L +A + + + + W +L G H
Sbjct: 644 LSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIH 679
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 200/411 (48%), Gaps = 1/411 (0%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YV C R G + N +++M + G A V
Sbjct: 92 PDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRV 151
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F ER+ SW ++ Y + G L ++ +GV ++ VL +C + +
Sbjct: 152 FAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDW 211
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G ++H+ V + + V L+ +YAKC + A +VF ++ + D +W+A+I G+
Sbjct: 212 RMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGH 271
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G+ ++LF+ M + P+ +T + V A + + +++H L +K GF++
Sbjct: 272 FENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDV 331
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
N+++ Y+ ++ ++ F MD D +SW A+I+G+ + +A+E+ M
Sbjct: 332 AFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVN 391
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
P+ T ++ L + + +++ G + H GF S VV+ +AL++MYAK R++ A
Sbjct: 392 NVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKA 451
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+VF + K++VSW++M+ G+ + EAL + M + +KPN TFI
Sbjct: 452 IEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFI 501
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 168/359 (46%), Gaps = 13/359 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF +V N L+ MY + A+ +F M R+ +SW+A+ISG+ + G P+ AL
Sbjct: 323 VKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKAL 382
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ LM + P+ T A++ACA G G ++H G V+N L+ MY
Sbjct: 383 EVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMY 442
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K + A VF E++ +SW S+++ +C + L F + V + +
Sbjct: 443 AKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYF-RHMLADVKPNSVTFI 501
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ L ACA G L+ G +IH+ V +C + ++ ++ LI+LY KC + A F
Sbjct: 502 AALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAK 561
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL- 300
D+ +W+ +I G+ G A+ F +M G P EVTF +L A + G +L
Sbjct: 562 DVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELF 621
Query: 301 HSLIIKMGFSSFTFVAN-----TVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
HS+ K ++ V N ++D S+ L E+ +EM D W AL+ G
Sbjct: 622 HSMTDK-----YSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNG 675
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/688 (31%), Positives = 378/688 (54%), Gaps = 31/688 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDE--MPERNVISWSALISGFSQIGMPEV 59
I +GF + + MY + + DAQ++FDE + +++ W+++I+ + G
Sbjct: 148 IRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVE 207
Query: 60 ALNYFRLMVCC-VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
L F MV V+ P TY V+AC S G+ + G +HGR+ ++GLE +++ N L+
Sbjct: 208 VLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLE-ATNLWNSLV 266
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAIS 176
YGKCG L A +F+ ++ +SW +++++ Q GE + L +F +L + V +
Sbjct: 267 TFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPN 326
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+ S+L A + L L+ G +IH+ +F+ +LE D + LI Y+KC ++ A +F
Sbjct: 327 RVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFE 386
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ L D+ +W++++ GY Q + D+F +M SG+ P + + + A + +++ G
Sbjct: 387 RLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAAS--RDSSG 444
Query: 297 ------GRQLHSLIIKM---GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
G+++H I++ G S + V+N +L Y+K + ++ K F M D SW
Sbjct: 445 LIYFRRGKEIHGYILRRITPGGVSLS-VSNAILKMYAKFNRIADAEKIFKGMKNRDSYSW 503
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
NA++ G+ + + + + + D+L +G + + S +L + +++ GKQ H + K
Sbjct: 504 NAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAK 563
Query: 408 -------PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
P DS + I +AL+ MY+KCG + DA +VF + K++ SW M+ G A HGL
Sbjct: 564 LFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGL 623
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
EAL+++ M+ + IKPN TF+ +L AC H GLV+EG +YF+SM D+G+SP ++H A
Sbjct: 624 AVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYA 683
Query: 521 SVVHLFACRGQTRRAYEFIK-----SSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKI 574
++ LF GQ RA ++ P + + +W+ LL C K L LG AA KI
Sbjct: 684 CMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKI 743
Query: 575 LSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTS 634
L +PED + +I+L+N+YA + +W++ KVRK M++K L+K+ GCSW + N+ H F
Sbjct: 744 LELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAG 803
Query: 635 RFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
Q +++E + QL+ GYVP
Sbjct: 804 DVYHPQRKEIYEKLAQLNYSCRRMGYVP 831
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 160/557 (28%), Positives = 289/557 (51%), Gaps = 25/557 (4%)
Query: 25 RINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVS 84
R+ AQ+LFD P R+VISWSALI+ +S+ G A F+ M+ L+PN ++ +
Sbjct: 70 RLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLK 129
Query: 85 ACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS--LERNS 142
S G+ +++HG R+G L+S + I MY +CG+L AQ VFD + L +
Sbjct: 130 VSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDI 189
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRKSG-VAISEFSCASVLGACAVLGNLKVGMQIHS 201
+ W S++++Y G V L++F G VA +E + ASV+ AC G K G +H
Sbjct: 190 LLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHG 249
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACE 261
+ K LE + L+ Y KC L AS++F I D+ +W+A+I Q G+
Sbjct: 250 RIIKAGLEATN-LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGEN 308
Query: 262 AIDLFVKMFS--SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
A+ LF +M + P+ VTF +L A + + GR++H+ I ++ T + N++
Sbjct: 309 ALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSL 368
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
+ FYSKC + ++ + F+ + D++SWN+++AG+ + G ++ K M+ G P+
Sbjct: 369 ITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDS 428
Query: 380 YTYSNILNI----SSDIPAIEWGKQTHCCIVK---PGFDSNVVIGSALVDMYAKCGRLND 432
++ + I N SS + GK+ H I++ PG ++ + +A++ MYAK R+ D
Sbjct: 429 HSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPG-GVSLSVSNAILKMYAKFNRIAD 487
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A K+F + +++ SWN M+ GY+++ + L I+ + + + + +L++C
Sbjct: 488 AEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGR 547
Query: 493 IGLVEEG--WHYFNSMIRDHGISPRMDHIASV----VHLFACRGQTRRAYE-FIKSSPIE 545
+ ++ G +H + + + P D + S+ + +++ G + A + F+K +E
Sbjct: 548 LVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLK---ME 604
Query: 546 PNKVV-WRCLLSGCKTH 561
V W +++GC H
Sbjct: 605 RKDVFSWTAMITGCAHH 621
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/679 (32%), Positives = 374/679 (55%), Gaps = 12/679 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG ++ + L+ + + +++A+ ++ + ERN ++ + LI+G + E A
Sbjct: 304 VLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAA 363
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDA----RSGKEIHGRMYRSG-LELNSHVSN 115
F + N TYV +SA A A R G+E+H + R+G + VSN
Sbjct: 364 AEIF-MGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSN 422
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
L+NMY KCG + A VF R+ ISW +++++ Q G + + L R++ +
Sbjct: 423 GLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGP 482
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
S F+ S L +CA LG L G Q+H K L D V+ L+ +Y +C ++ +F
Sbjct: 483 SNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIF 542
Query: 236 SNIQLPDLTAWSALIGGYAQ-LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
+++ D+ +W++++G A E++ +F M SGL+P++VTF L A +
Sbjct: 543 NSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVL 602
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
G+Q+HS+++K G + V N ++ Y+K ++ + F M D +SWN++I+G
Sbjct: 603 ELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISG 662
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
++ + H EA++ + M+ + T+S +LN + + A+E G + H ++ +S+
Sbjct: 663 YIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESD 722
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
VV+ SALVDMY+KCGR++ A KVF +S KN SWN+M+ GYA+HGLGR+ALEI+ MQE
Sbjct: 723 VVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQE 782
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+ P+ TF+ VLSAC H GLVE G YF ++ D+GI PR++H + V+ L G+
Sbjct: 783 SGESPDHVTFVSVLSACSHAGLVERGLDYFE-LMEDYGILPRIEHYSCVIDLLGRAGELD 841
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHK---DLVLGRYAAEKILSTDPEDTSAHIMLSN 590
+ E++K P++PN ++WR +L C+ K + LG A+ +L +P++ +++ S
Sbjct: 842 KIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSK 901
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQ 650
+A W++TAK R MK ++KK+ G SW L + +H F + +++E +N
Sbjct: 902 FHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNF 961
Query: 651 LSVHLFDGGYVPDPIYSSH 669
L + + GYVP Y H
Sbjct: 962 LIQKIRNAGYVPLTEYVLH 980
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 151/580 (26%), Positives = 289/580 (49%), Gaps = 31/580 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G ++ NHL+ Y K +R++ A+++FD MP RN +SW+ LISG G+PE A
Sbjct: 91 VVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDA 150
Query: 61 LNYFRLMV-----CCVLEPNYYTYVGAVSACASRGDARSG--KEIHGRMYRSGLELNSHV 113
FR M+ C P +T+ + AC G R G ++HG + ++ N+ V
Sbjct: 151 FPLFRAMLREGPGC---RPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTV 207
Query: 114 SNCLINMYGKCGLLSS--AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSR 169
N LI+MYG C + AQ VFD + R+ I+W +L+S Y + G+ + +F +
Sbjct: 208 CNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYD 267
Query: 170 KSGVAI--SEFSCASVLGACAVLGNLKVGM--QIHSLVFKCALEFDKFVAMGLINLYAKC 225
SG+ + +E + S++ A L + +G+ Q+ V K D +V L++ +A+
Sbjct: 268 DSGIELRPTEHTFGSLITA-TYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARH 326
Query: 226 EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
LD A ++ ++ + + LI G + A ++F+ S + + T+ +L
Sbjct: 327 GMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD-TYVVLL 385
Query: 286 GAFADVKET----IGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
A A+ GR++H+ +++ G V+N +++ Y+KC ++++ + F M+
Sbjct: 386 SAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLME 445
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS--DIPAIEWG 398
D +SWN +I L Y EA ++ L + ++ I +SS + + G
Sbjct: 446 ARDRISWNTIITA-LDQNGYCEA-AMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAG 503
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML-VGYAQ 457
+Q HC VK G + + +ALV MY +CGR+++ ++F+ +S+ ++VSWN+++ V +
Sbjct: 504 QQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASS 563
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
E+++++S M ++ + PN TF+ L+A + ++E G + M++ HG++
Sbjct: 564 QAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLK-HGVTEDNA 622
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+++ +A G + + W ++SG
Sbjct: 623 VDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISG 662
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 212/422 (50%), Gaps = 17/422 (4%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
S + +H + + GL + ++N L+N Y K L +A+ VFD RN++SW L+S +
Sbjct: 83 SPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHV 142
Query: 154 QCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVG--MQIHSLVFKCALE 209
G +F +L G + F+ SVL AC G ++G +Q+H LV K
Sbjct: 143 LSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFT 202
Query: 210 FDKFVAMGLINLYAKCE--KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
+ V LI++Y C LA RVF + DL W+AL+ YA+ G A LF
Sbjct: 203 SNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFR 262
Query: 268 KMF--SSG--LMPSEVTFSYVLGAFADVKETIG-GRQLHSLIIKMGFSSFTFVANTVLDF 322
M SG L P+E TF ++ A ++G QL ++K G SS +V + ++
Sbjct: 263 AMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSA 322
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
+++ +L+E+ + + E + V+ N LIAG L +GEA + + N+ TY
Sbjct: 323 FARHGMLDEAKDIYLGLKERNAVTLNGLIAG-LVKQQHGEAAAEIFMGARDSAAVNVDTY 381
Query: 383 ----SNILNISSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSALVDMYAKCGRLNDARKVF 437
S I S+ + G++ H +++ G + + + LV+MYAKCG ++ A +VF
Sbjct: 382 VVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVF 441
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ +++ +SWNT++ Q+G A+ Y +M++N I P++ I LS+C +GL+
Sbjct: 442 QLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLA 501
Query: 498 EG 499
G
Sbjct: 502 AG 503
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/629 (33%), Positives = 351/629 (55%), Gaps = 1/629 (0%)
Query: 40 NVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIH 99
+VI+W+ +S F Q G A++ F M+ + + T+V +S A GK+IH
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929
Query: 100 GRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHV 159
G + RSGL+ V NCLINMY K G +S A+ VF E + +SW +++S G
Sbjct: 930 GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989
Query: 160 HGLKIFLLSRKSGVAISEFSCASVLGACAVLGN-LKVGMQIHSLVFKCALEFDKFVAMGL 218
+ +F+ + G+ +F+ ASVL AC+ LG + QIH+ K + D FV+ L
Sbjct: 990 CSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTL 1049
Query: 219 INLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE 278
I++Y+K K++ A +F N DL +W+A++ GY G +A+ L++ M SG ++
Sbjct: 1050 IDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQ 1109
Query: 279 VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE 338
+T + A + G+Q+ ++++K GF+ FV + VLD Y KC +E + + F+E
Sbjct: 1110 ITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNE 1169
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
+ D V+W +I+G + + A+ M P+ YT++ ++ S + A+E G
Sbjct: 1170 IPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQG 1229
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
+Q H VK + + ++LVDMYAKCG + DAR +F ++ + SWN M+VG AQH
Sbjct: 1230 RQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQH 1289
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
G EAL+ + M+ + P+ TFIGVLSAC H GLV E + F SM + +GI P ++H
Sbjct: 1290 GNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEH 1349
Query: 519 IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD 578
+ +V + G+ R A + I S P E + ++R LL+ C+ D G+ AEK+L+ +
Sbjct: 1350 YSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALE 1409
Query: 579 PEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQ 638
P D++A+++LSNVYA AN W+ A R +M++ ++KKD G SW +L+NK+H F +
Sbjct: 1410 PSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSH 1469
Query: 639 FQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
+ ++ + + + + GY+PD ++
Sbjct: 1470 EETDVIYNKVEYIMKRIREEGYLPDTDFA 1498
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 230/442 (52%), Gaps = 2/442 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG V N L+ MYVK ++ A+ +F +M E +++SW+ +ISG + G+ E +
Sbjct: 932 VVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECS 991
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDA-RSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ F ++ L P+ +T + AC+S G +IH ++G+ L+S VS LI+
Sbjct: 992 VGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLID 1051
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y K G + A+F+F + SW +++ Y G+ L++++L ++SG ++ +
Sbjct: 1052 VYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQIT 1111
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
A+ A L LK G QI ++V K D FV G++++Y KC +++ A R+F+ I
Sbjct: 1112 LANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIP 1171
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PD AW+ +I G + G+ A+ + M S + P E TF+ ++ A + + GRQ
Sbjct: 1172 SPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQ 1231
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ +K+ + FV +++D Y+KC +E++ F + + SWNA+I G +
Sbjct: 1232 IHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGN 1291
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
EA++ ++M G P+ T+ +L+ S + + + K G + + S
Sbjct: 1292 AEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYS 1351
Query: 419 ALVDMYAKCGRLNDARKVFDHL 440
LVD ++ GR+ +A KV +
Sbjct: 1352 CLVDALSRAGRIREAEKVISSM 1373
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/565 (24%), Positives = 261/565 (46%), Gaps = 38/565 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPE 58
++TSG HP+ N+L+ MY K ++ A+KLFD P+ R++++W+A++S +
Sbjct: 652 ILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKARD- 710
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
+ FRL+ + +T C + + +HG + GL+ + V+ L+
Sbjct: 711 -GFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALV 769
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
N+Y K G + A+ +FD R+ + W ++ +Y G L +F ++G+ +
Sbjct: 770 NIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDV 829
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ C + +K + LE+ L L A KL +
Sbjct: 830 TL------CTLARVVKSKQNV--------LEWQ------LKQLKAYGTKLFMYDDDDDG- 868
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ AW+ + + Q G+ EA+D FV M +S + +TF +L A + G+
Sbjct: 869 --SDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGK 926
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG----H 354
Q+H ++++ G V N +++ Y K + + F +M+E D+VSWN +I+G
Sbjct: 927 QIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSG 986
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI-PAIEWGKQTHCCIVKPGFDSN 413
L C G ++LL+ L P+ +T +++L S + Q H C +K G +
Sbjct: 987 LEECSVGMFVDLLRGGLL----PDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLD 1042
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ + L+D+Y+K G++ +A +F + +L SWN M+ GY G +AL +Y +MQE
Sbjct: 1043 SFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQE 1102
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+ + N T A + +++G +++ G + + I+ V+ ++ G+
Sbjct: 1103 SGERANQITLANAAKAAGGLVGLKQG-KQIQAVVVKRGFNLDLFVISGVLDMYLKCGEME 1161
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGC 558
A P P+ V W ++SGC
Sbjct: 1162 SARRIFNEIP-SPDDVAWTTMISGC 1185
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 194/402 (48%), Gaps = 27/402 (6%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE--RNSISWVSLLSSY 152
GK H R+ SG + ++N LI MY KCG LSSA+ +FD + + R+ ++W ++LS++
Sbjct: 645 GKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAH 704
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
G +F L R+S V+ + + A V C + + +H K L++D
Sbjct: 705 ADKARD--GFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDV 762
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
FVA L+N+YAK ++ A +F + L D+ W+ ++ Y G EA+ LF + +
Sbjct: 763 FVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRT 822
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
GL P +VT L K+ + QL L G F + +
Sbjct: 823 GLRPDDVTLC-TLARVVKSKQNVLEWQLKQL-KAYGTKLFMYDDDDD------------- 867
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
DV++WN ++ L EA++ DM+ + T+ +L++ + +
Sbjct: 868 --------GSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGL 919
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+E GKQ H +V+ G D V +G+ L++MY K G ++ AR VF ++ +LVSWNTM+
Sbjct: 920 NCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMI 979
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
G A GL ++ ++ + + P+ T VL AC +G
Sbjct: 980 SGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLG 1021
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 157/387 (40%), Gaps = 45/387 (11%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI--Q 239
S+L +L +G + H+ + D+F+ LI +Y+KC L A ++F
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
DL W+A++ +A KA + LF + S + + T + V
Sbjct: 691 SRDLVTWNAILSAHAD--KARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAES 748
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH +K+G FVA +++ Y+K + E+ FD M DVV WN ++ ++ +
Sbjct: 749 LHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGL 808
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILN-ISSDIPAIEWG-KQTHCCIVKPGFDSNVVIG 417
EA+ L + G P+ T + + S +EW KQ G
Sbjct: 809 EYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKA------------YG 856
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ L MY +D +++WN L + Q G EA++ + M +++
Sbjct: 857 TKLF-MYDDDDDGSD------------VIAWNKTLSWFLQRGETWEAVDCFVDMINSRVA 903
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR--MDHIASV----VHLFACRGQ 531
+ TF+ +LS + +E G HGI R +D + SV ++++ G
Sbjct: 904 CDGLTFVVMLSVVAGLNCLELGKQI-------HGIVVRSGLDQVVSVGNCLINMYVKTGS 956
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGC 558
RA E + V W ++SGC
Sbjct: 957 VSRARTVFWQMN-EVDLVSWNTMISGC 982
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/664 (31%), Positives = 355/664 (53%), Gaps = 2/664 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ +G N I LL MYV DA+ +F ++ W+ +I GF+ +G + A
Sbjct: 72 MLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFA 131
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L ++ M+ C P+ YT+ + AC G+ +H ++ G EL+ V + LI
Sbjct: 132 LLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKF 191
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G + A+++FD ++ + W +L+ Y + G+ + +F+ R++ + +
Sbjct: 192 YSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTF 251
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA--MGLINLYAKCEKLDLASRVFSNI 238
A VL CA + G Q+H LV LE D VA LI++Y KC +++A ++F
Sbjct: 252 ACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQR 311
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +A+I GY G A+++F + + + VT + VL A A + G+
Sbjct: 312 TPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGK 371
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+LH I+K G +V + ++D Y+KC L+ + +TF + + D V WN++I +
Sbjct: 372 ELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNG 431
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EAI+L + M G + + S L+ +++PA+ +GK+ H +++ F S++ S
Sbjct: 432 KPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAES 491
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMY+KCG L+ A +VFD + KN VSWN+++ Y HG +++L ++ M + I+P
Sbjct: 492 ALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQP 551
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ ++SAC H G V+EG HYF M + GI RM+H A +V LF G+ A+
Sbjct: 552 DHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGM 611
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I S P P+ VW LL C+ H ++ L A+ + DP+++ +++LSNV+A A W
Sbjct: 612 INSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQW 671
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
+ K+R +MKE+ ++K GCSW ++ N H F + + Q ++ ++ L + L
Sbjct: 672 ESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKE 731
Query: 659 GYVP 662
GYVP
Sbjct: 732 GYVP 735
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 229/489 (46%), Gaps = 8/489 (1%)
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
V + C G++ H +M +G+ N + L+ MY CG A+ +F
Sbjct: 50 VSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRL 109
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQI 199
S W ++ + G+ L + G +++ V+ AC L ++ +G +
Sbjct: 110 WCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVV 169
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
H + E D FV LI Y++ + A +F + D W+ ++ GY + G
Sbjct: 170 HDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDW 229
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT- 318
A +F++M + P+ VTF+ VL A G QLH L++ G + VANT
Sbjct: 230 DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTF 289
Query: 319 -VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
++D Y KC +E + K FD+ D+V A+I+G++ + A+E+ + +L E
Sbjct: 290 ALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRA 349
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
N T +++L + + A+ GK+ H I+K G + +GSA++DMYAKCGRL+ A + F
Sbjct: 350 NSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTF 409
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+S K+ V WN+M+ +Q+G EA++++ M K + + LSAC ++ +
Sbjct: 410 IGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALH 469
Query: 498 EGWHYFNSMIRDHGISPRMDHIA--SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
G M+R + R D A +++ +++ G A + E N+V W ++
Sbjct: 470 YGKEIHAFMMRG---AFRSDLFAESALIDMYSKCGNLDLACRVFDTME-EKNEVSWNSII 525
Query: 556 SGCKTHKDL 564
+ H L
Sbjct: 526 AAYGNHGRL 534
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/628 (32%), Positives = 350/628 (55%), Gaps = 3/628 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF +V N LL++Y +NDA++LFDEMPER+V+SW+ +I S G A NY+
Sbjct: 189 GFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYY 248
Query: 65 RLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
M+ V++PN + + + A+ D + IH + GL+ N L++ YGK
Sbjct: 249 FWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGK 308
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + + VF+ ++E+N +SW S+++ G L F + +G + + +S+
Sbjct: 309 CGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSI 368
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L L K G +IH + E D F+A LI++YAK AS +F N+ ++
Sbjct: 369 LPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNI 428
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+A+I YA EAI ++M +G P+ VTF+ VL A A + G+++H++
Sbjct: 429 VSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAM 488
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+++G +S FV+N+++D Y+KC L + F+ D VS+N LI G+ + ++
Sbjct: 489 GVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQS 547
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ L +M G P++ ++ +++ +++ A++ GK+ H ++ S++ + ++L+D
Sbjct: 548 LNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDF 607
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y KCGR++ A ++F+ + K++ SWNTM++GY G A+ ++ M+++ ++ + ++
Sbjct: 608 YTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSY 667
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
I VLSAC H GLVE GW YF+ M+ + P H +V L G A + I+ P
Sbjct: 668 IAVLSACSHGGLVERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLP 726
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
I P+ +W LL C+ + ++ LGR AAE + P+ +I+LSN+YAE WDE K
Sbjct: 727 IAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANK 786
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+R++MK + KK+ GCSW ++ +++H F
Sbjct: 787 IRELMKSRGAKKNPGCSWVQIYDQVHAF 814
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 270/515 (52%), Gaps = 8/515 (1%)
Query: 2 ITSGFHPNVITY-NHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQI--GM 56
I +GF P ++ L+L Y KF LF++ + R W+ LI S G
Sbjct: 81 ILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNCRTAFLWNTLIRAHSIAWNGT 140
Query: 57 PEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
+ Y R MV ++ + +T+ + C+ D G E+HG +++ G + + +V N
Sbjct: 141 FDGFETYNR-MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNT 199
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKI-FLLSRKSGVAI 175
L+ +YG CG L+ A+ +FD ER+ +SW +++ G++ F + +S +
Sbjct: 200 LLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKP 259
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ S S+L A L + ++ +IH K L+ L++ Y KC + +VF
Sbjct: 260 NLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVF 319
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ + +W+++I G A G+ +A++ F M +G P+ VT S +L +++
Sbjct: 320 NETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFK 379
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+++H ++MG + F+AN+++D Y+K E+ F +D ++VSWNA+IA +
Sbjct: 380 AGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYA 439
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+ EAI + M G CPN T++N+L + + + GK+ H V+ G S++
Sbjct: 440 LNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLF 499
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ ++L+DMYAKCG L+ AR VF+ S K+ VS+N +++GY++ ++L ++S M+
Sbjct: 500 VSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLG 558
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
KP+ +F+GV+SAC ++ +++G +R+H
Sbjct: 559 KKPDVVSFVGVISACANLAALKQGKEVHGVALRNH 593
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 246/515 (47%), Gaps = 12/515 (2%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC--LINMYGKCGLLSSAQFVF 134
Y ++ ++ C+ K++H +G L VS C LI Y K S +F
Sbjct: 55 YIHINLLTLCSKVQSLLQTKQVHALGILNGF-LPRSVSLCASLILNYAKFQHPGSFCSLF 113
Query: 135 DASLE--RNSISWVSLLSSYCQCGEHV-HGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
+ + + R + W +L+ ++ G + + + GV + + + VL C+
Sbjct: 114 NQTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSF 173
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
++ GM++H +VFK + D +V L+ LY C L+ A R+F + D+ +W+ +IG
Sbjct: 174 DICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIG 233
Query: 252 GYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
+ G EA + + M S + P+ V+ +L A +++ R++H +K+G
Sbjct: 234 LLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLD 293
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S N ++D Y KC ++ + F+E E + VSWN++I G +A+ + M
Sbjct: 294 SQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMM 353
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
+ G PN T S+IL + ++ + GK+ H ++ G ++++ I ++L+DMYAK G
Sbjct: 354 IDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHS 413
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+A +F +L +N+VSWN M+ YA + L EA+ MQE PN TF VL AC
Sbjct: 414 TEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPAC 473
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
+G + G ++M G++ + S++ ++A G A +S ++V
Sbjct: 474 ARLGFLGPG-KEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTS--RKDEVS 530
Query: 551 WRCLLSGCKTHKDLV--LGRYAAEKILSTDPEDTS 583
+ L+ G D + L ++ ++L P+ S
Sbjct: 531 YNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVS 565
>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 692
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 224/662 (33%), Positives = 350/662 (52%), Gaps = 20/662 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP--E 58
++ +G +V N L+ +Y K I A+ +F+ + ++V+SW+ LI+G+SQ G
Sbjct: 36 LLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYS 95
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
+ F+ M PN +T+ G +A +S + G + H ++ + V + LI
Sbjct: 96 FVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLI 155
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
NMY K G + A+ VFD ERN++SW +++S Y ++FLL R+ A +F
Sbjct: 156 NMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFLLMRREEGAHDKF 215
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
SVL A V + G QIH L K L V L+ +Y KC LD A + F
Sbjct: 216 IYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELS 275
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D WSA+I GYAQ G + EA++LF M +G PSE TF V+ A +D+ G+
Sbjct: 276 GDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGK 335
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H +K G+ + +KC L ++ K FD + E D+V W SC
Sbjct: 336 QIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWT--------SC 387
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
M E P+ T +++L S + A+E GKQ H +K GF V IGS
Sbjct: 388 R----------MQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGS 437
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL MYAKCG L D VF + S+++++WN M+ G +Q+G G +ALE++ ++ KP
Sbjct: 438 ALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKP 497
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ VLSAC H+GLVE G YF M+ + GI PR++H A +V + + G+ EF
Sbjct: 498 DYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEF 557
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I+S+ I+ +WR LL C+ +++ LG YA EK++ +++SA+I+LS++Y
Sbjct: 558 IESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRS 617
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
D+ +VR++MK + + K+ GCSW EL++++H F Q + + + +L H+ D
Sbjct: 618 DDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDE 677
Query: 659 GY 660
Y
Sbjct: 678 CY 679
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 238/489 (48%), Gaps = 22/489 (4%)
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
+L P + ++V + C + D + GK IH ++ R+G + +++N L+N+Y KCG + A
Sbjct: 5 LLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKA 64
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGE--HVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+ VF++ ++ +SW L++ Y Q G + +++F R + + + V A +
Sbjct: 65 KLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAAS 124
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
G+Q H+L K + +D FV LIN+Y K + A +VF I + +W+
Sbjct: 125 SSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWAT 184
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I GYA A EA +LF+ M + ++ VL A G+Q+H L +K G
Sbjct: 185 IISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNG 244
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
S V N ++ Y KC L+++ KTF+ + D ++W+A+I G+ + EA+ L
Sbjct: 245 LLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFY 304
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+M G+ P+ +T+ ++N SDI A+E GKQ H +K G++ + + AKCG
Sbjct: 305 NMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCG 364
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
L DARK FD+L ++V W + MQ +I P++ T VL
Sbjct: 365 SLVDARKGFDYLKEPDIVLWTS------------------CRMQMERIMPHELTMASVLR 406
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC + +E+G I+ +G S + +++ ++A G + P +
Sbjct: 407 ACSSLAALEQGKQIHAQTIK-YGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP-SRDI 464
Query: 549 VVWRCLLSG 557
+ W ++SG
Sbjct: 465 MTWNAMISG 473
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/628 (32%), Positives = 350/628 (55%), Gaps = 3/628 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF +V N LL++Y +NDA++LFDEMPER+V+SW+ +I S G A NY+
Sbjct: 40 GFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYY 99
Query: 65 RLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
M+ V++PN + + + A+ D + IH + GL+ N L++ YGK
Sbjct: 100 FWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGK 159
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + + VF+ ++E+N +SW S+++ G L F + +G + + +S+
Sbjct: 160 CGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSI 219
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L L K G +IH + E D F+A LI++YAK AS +F N+ ++
Sbjct: 220 LPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNI 279
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+A+I YA EAI ++M +G P+ VTF+ VL A A + G+++H++
Sbjct: 280 VSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAM 339
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+++G +S FV+N+++D Y+KC L + F+ D VS+N LI G+ + ++
Sbjct: 340 GVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQS 398
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ L +M G P++ ++ +++ +++ A++ GK+ H ++ S++ + ++L+D
Sbjct: 399 LNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDF 458
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y KCGR++ A ++F+ + K++ SWNTM++GY G A+ ++ M+++ ++ + ++
Sbjct: 459 YTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSY 518
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
I VLSAC H GLVE GW YF+ M+ + P H +V L G A + I+ P
Sbjct: 519 IAVLSACSHGGLVERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLP 577
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
I P+ +W LL C+ + ++ LGR AAE + P+ +I+LSN+YAE WDE K
Sbjct: 578 IAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANK 637
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+R++MK + KK+ GCSW ++ +++H F
Sbjct: 638 IRELMKSRGAKKNPGCSWVQIYDQVHAF 665
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 237/435 (54%), Gaps = 2/435 (0%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
+T+ + C+ D G E+HG +++ G + + +V N L+ +YG CG L+ A+ +FD
Sbjct: 11 HTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDE 70
Query: 137 SLERNSISWVSLLSSYCQCGEHVHGLKI-FLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
ER+ +SW +++ G++ F + +S + + S S+L A L + ++
Sbjct: 71 MPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEM 130
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
+IH K L+ L++ Y KC + +VF+ + +W+++I G A
Sbjct: 131 TRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLAC 190
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G+ +A++ F M +G P+ VT S +L +++ G+++H ++MG + F+
Sbjct: 191 KGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFI 250
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
AN+++D Y+K E+ F +D ++VSWNA+IA + + EAI + M G
Sbjct: 251 ANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGE 310
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
CPN T++N+L + + + GK+ H V+ G S++ + ++L+DMYAKCG L+ AR
Sbjct: 311 CPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARN 370
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
VF+ S K+ VS+N +++GY++ ++L ++S M+ KP+ +F+GV+SAC ++
Sbjct: 371 VFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAA 429
Query: 496 VEEGWHYFNSMIRDH 510
+++G +R+H
Sbjct: 430 LKQGKEVHGVALRNH 444
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 207/417 (49%), Gaps = 6/417 (1%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
+ GV + + + VL C+ ++ GM++H +VFK + D +V L+ LY C L+
Sbjct: 3 RRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLN 62
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAF 288
A R+F + D+ +W+ +IG + G EA + + M S + P+ V+ +L
Sbjct: 63 DARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPIS 122
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
A +++ R++H +K+G S N ++D Y KC ++ + F+E E + VSWN
Sbjct: 123 AALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWN 182
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
++I G +A+ + M+ G PN T S+IL + ++ + GK+ H ++
Sbjct: 183 SIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRM 242
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
G ++++ I ++L+DMYAK G +A +F +L +N+VSWN M+ YA + L EA+
Sbjct: 243 GTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFV 302
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
MQE PN TF VL AC +G + G +R G++ + S++ ++A
Sbjct: 303 IQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVR-IGLTSDLFVSNSLIDMYAK 361
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV--LGRYAAEKILSTDPEDTS 583
G A +S ++V + L+ G D + L ++ ++L P+ S
Sbjct: 362 CGCLHSARNVFNTS--RKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVS 416
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 124/249 (49%), Gaps = 8/249 (3%)
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M G+ + TF +VL +D + G ++H ++ K+GF + +V NT+L Y C
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILN 387
L ++ + FDEM E DVVSWN +I + Y EA M+ PNL + ++L
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
IS+ + E ++ HC VK G DS V +ALVD Y KCG + +VF+ KN VS
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
WN+++ G A G +AL + MM + +PN T +L V + + G
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEI----- 235
Query: 508 RDHGISPRM 516
HG S RM
Sbjct: 236 --HGFSMRM 242
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 332/592 (56%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L + + YV + C + D + K++H + +S +E N+HV N L+++Y +CG L A+
Sbjct: 24 LITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEAR 83
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFDA ++++ SW ++++ Y + +++F GV + + +L ACA L
Sbjct: 84 CVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLS 143
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
LK G ++H+ + LE D V L+ +Y KC ++ A R+F N+ D+ +W+ +IG
Sbjct: 144 ALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIG 203
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
YAQ G EA L ++M G P+ +T+ +L A A +++H + G
Sbjct: 204 AYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLEL 263
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V ++ Y+K ++++ FD M DVVSWN +I EA +L M
Sbjct: 264 DVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQ 323
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
EG P+ + +ILN + A+EW K+ H + G + +V +G+ALV MY+K G ++
Sbjct: 324 TEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSID 383
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
DAR VFD + +N+VSWN M+ G AQHGLG++ALE++ M + +KP+ TF+ VLSAC
Sbjct: 384 DARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACS 443
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
H GLV+EG + +M + +GI P + H +V L G+ A FI + ++P++ W
Sbjct: 444 HAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATW 503
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
LL C+T+ ++ LG A++ L DP++ + +++LSN+YAEA WD + VR +M+E+
Sbjct: 504 GALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRER 563
Query: 612 SLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++K+ G SW E+ NK+H F + + + +++E +++ + GY+PD
Sbjct: 564 GIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPD 615
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 238/455 (52%), Gaps = 4/455 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I S N N+LL +Y++ R+ +A+ +FD + +++ SW+A+I+G+ + E A
Sbjct: 54 IIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDA 113
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ FR M ++PN TY+ + ACAS + GKE+H + GLE + V L+ M
Sbjct: 114 MRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRM 173
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG ++ A+ +FD + + ISW ++ +Y Q G ++ L + G + +
Sbjct: 174 YGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITY 233
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L ACA G LK ++H LE D V L+ +YAK +D A VF +++
Sbjct: 234 VSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKV 293
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+ +IG +A+ G+ EA DLF++M + G P + F +L A A +++
Sbjct: 294 RDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKI 353
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + G V ++ YSK ++++ FD M +VVSWNA+I+G LA
Sbjct: 354 HRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISG-LAQHGL 412
Query: 361 GE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
G+ A+E+ + M G P+ T+ +L+ S ++ G+ + + + G + +V +
Sbjct: 413 GQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCN 472
Query: 419 ALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
+VD+ + GRL +A+ D+++ + +W +L
Sbjct: 473 CMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALL 507
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 209/411 (50%), Gaps = 8/411 (1%)
Query: 164 IFLLSR-KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
+ L++R + G+ F VL C +L Q+H + K +E + V L+++Y
Sbjct: 14 VVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVY 73
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
+C +L A VF + +W+A+I GY + A +A+ LF +M G+ P+ T+
Sbjct: 74 IECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYM 133
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
+L A A + G+++H+ I G S V +L Y KC + E+ + FD + H
Sbjct: 134 IILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNH 193
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
D++SW +I + S + EA L+ M EG PN TY +ILN + A++W K+ H
Sbjct: 194 DIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVH 253
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
+ G + +V +G+ALV MYAK G ++DAR VFD + +++VSWN M+ +A+HG G
Sbjct: 254 RHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGH 313
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW-HYFNSMIRDHGISPRMDHIAS 521
EA +++ MQ KP+ F+ +L+AC G +E W + D G+ + +
Sbjct: 314 EAYDLFLQMQTEGCKPDAIMFLSILNACASAGALE--WVKKIHRHALDSGLEVDVRVGTA 371
Query: 522 VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
+VH+++ G A + N V W ++SG H LG+ A E
Sbjct: 372 LVHMYSKSGSIDDARVVFDRMKVR-NVVSWNAMISGLAQHG---LGQDALE 418
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 135/237 (56%)
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
EAI + + GL+ + VL K+ + +Q+H IIK V N +L
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
Y +C L+E+ FD + + SWNA+IAG++ H +A+ L ++M EG PN
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
TY IL + + A++WGK+ H CI G +S+V +G+AL+ MY KCG +N+AR++FD+L
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ +++SW M+ YAQ G G+EA + M++ KPN T++ +L+AC G ++
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALK 247
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/635 (31%), Positives = 354/635 (55%), Gaps = 11/635 (1%)
Query: 8 PNVITYNHLLLMYVKFSR--INDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF- 64
P++ N LL Y + + A++L DEMP RN +S++ LI +S+ G E +L F
Sbjct: 43 PSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFL 102
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
++ + +TY A++AC+ G + GK +H GL VSN L++MY +C
Sbjct: 103 HAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARC 162
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A+ VFD + ER+ +SW SL+S Y + G H L++F L R+ + ++ F+ SV+
Sbjct: 163 GDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVI 222
Query: 185 GACAV-LGNLK-VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
C+ G+++ + +H V K L+ D F+A ++++YAK L A +F ++ P+
Sbjct: 223 KCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPN 282
Query: 243 LTAWSALIGGYAQLGKAC------EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ ++A+I G + A EA+ L+ ++ S G+ P+E TFS V+ A +
Sbjct: 283 VVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEF 342
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+Q+H ++K F F+ + ++D Y +E+ + F + + DVV+W A+I+G +
Sbjct: 343 GKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQ 402
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ + A+ L ++L G P+ +T S+++N + + + G+Q C K GFD +
Sbjct: 403 NELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAM 462
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
G++ + MYA+ G + A + F + S ++VSW+ ++ +AQHG R+AL+ ++ M K+
Sbjct: 463 GNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKV 522
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
PN+ TF+GVL+AC H GLV+EG Y+ M ++G+ P + H VV L G+ A
Sbjct: 523 VPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAE 582
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
FI+ S VVW+ LL C+ H+D+ G+ A++I+ P + ++ L N+Y +A
Sbjct: 583 AFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAG 642
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+K+R +MKE+ +KK+ G SW EL++ +H F
Sbjct: 643 ELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSF 677
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 236/462 (51%), Gaps = 12/462 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G V N L+ MY + + +A+++FD ER+ +SW++L+SG+ ++G E L
Sbjct: 141 VLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEML 200
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARS---GKEIHGRMYRSGLELNSHVSNCLI 118
F LM C + N + +G+V C S GD + +HG + ++GL+ + +++ ++
Sbjct: 201 RVFALMRRCAMGLNSFA-LGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMV 259
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH------GLKIFLLSRKSG 172
+MY K G LS A +F + L+ N + + ++++ C+ VH L ++ + G
Sbjct: 260 DMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRG 319
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+ +EF+ +SV+ AC + G+++ G QIH V K + D F+ LI+LY ++
Sbjct: 320 MEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGF 379
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
R F ++ D+ W+A+I G Q A+ LF ++ GL P T S V+ A A +
Sbjct: 380 RCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLA 439
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
G Q+ K GF FT + N+ + Y++ +E +++ F EM+ HDVVSW+A+I+
Sbjct: 440 VVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIIS 499
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFD 411
H +A++ +M+ PN T+ +L S ++ G + + + ++ G
Sbjct: 500 SHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLC 559
Query: 412 SNVVIGSALVDMYAKCGRLNDARK-VFDHLSSKNLVSWNTML 452
V + +VD+ + GRL DA + D + V W ++L
Sbjct: 560 PTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLL 601
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 196/415 (47%), Gaps = 23/415 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP--- 57
++ +G ++ + ++ MY K +++A LF + + NV+ ++A+I+G +
Sbjct: 243 VVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHK 302
Query: 58 EV---ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
EV AL+ + + +EP +T+ + AC GD GK+IHG++ + + + +
Sbjct: 303 EVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIG 362
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
+ LI++Y + F + +++ ++W +++S Q L +F G+
Sbjct: 363 SALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLK 422
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLAS 232
F+ +SV+ ACA L ++ G Q+ K FD+F AMG I++YA+ ++ A
Sbjct: 423 PDPFTISSVMNACASLAVVRTGEQMQCFATKSG--FDRFTAMGNSCIHMYARSGNVEAAI 480
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD-- 290
+ F ++ D+ +WSA+I +AQ G A +A+ F +M + ++P+E+TF VL A +
Sbjct: 481 QRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGG 540
Query: 291 -VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHD-VVSWN 348
V E G R + ++ G V+D + L ++ + HD V W
Sbjct: 541 LVDE--GLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQ 598
Query: 349 ALIAGHLASCHYGEAIE---LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
+L L SC +E L+ D + E + Y N+ N+ D + G +
Sbjct: 599 SL----LGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSK 649
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/673 (32%), Positives = 366/673 (54%), Gaps = 7/673 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +V N L+ M+ FS + +A +FD M E ++ISW+A+IS ++ G+ +
Sbjct: 973 IIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRES 1032
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M E N T +S C+S + + G+ IHG + + GL+ N + N L+ +
Sbjct: 1033 LRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTL 1092
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G A+ VF A ER+ ISW S+++ Y Q G+ + GLKI + G ++ +
Sbjct: 1093 YSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTF 1152
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS L AC+ L +H+L+ V L+ +Y K + A +V +
Sbjct: 1153 ASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQ 1212
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQ 299
PD W+ALIGG+A+ + EA+ + + G+ + +T VLGA + + + G
Sbjct: 1213 PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMP 1272
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ I+ GF S +V N+++ Y+KC L S FD + ++WNA++A A+ H
Sbjct: 1273 IHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVA---ANAH 1329
Query: 360 YG---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+G EA+++ +M G + +++S L ++++ +E G+Q H ++K GF+S++ +
Sbjct: 1330 HGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHV 1389
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+A +DMY KCG ++D K+ +++ +SWN ++ +A+HG ++A E + M +
Sbjct: 1390 TNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 1449
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+ TF+ +LSAC H GLV+EG Y++SM R+ G+ P ++H ++ L G+ A
Sbjct: 1450 KPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAE 1509
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
FIK P+ PN + WR LL+ C+ H +L L R AE +L DP D SA+++ SNV A +
Sbjct: 1510 GFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSG 1569
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W++ +RK M ++KK CSW +L++K+H F Q + + +L
Sbjct: 1570 KWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTK 1629
Query: 657 DGGYVPDPIYSSH 669
+ GYVPD ++ H
Sbjct: 1630 EAGYVPDTSFALH 1642
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 305/559 (54%), Gaps = 7/559 (1%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L+P+ Y + + C + + G IH + +G + H++ LI Y K G + +A+
Sbjct: 28 LDPSLYLKI--LQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAAR 85
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD ER+ +SW +++S Y Q G +F R GV ++F+ S L AC L
Sbjct: 86 NVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLR 145
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
L +G+Q+ + K + FV L++ ++KC K++ AS +F + D+ +W+A+IG
Sbjct: 146 CLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIG 205
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
GYA G A ++ +F M GL+P T VL A A+ I Q+H +I ++G+ S
Sbjct: 206 GYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGS 265
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EAIELLKDM 370
+ V +++ Y+K L + M + D+ S ALI G+ Y +A++L K+M
Sbjct: 266 YDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEM 325
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSNVVIGSALVDMYAKCG 428
+ ++LNI +++ + G Q H +K P +D V +G+AL+DMYAK G
Sbjct: 326 NQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYD--VAMGNALIDMYAKSG 383
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ DA++ FD + KN++SW +++ GYA+HG G A+ +Y M+ KPND TF+ +L
Sbjct: 384 EIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLF 443
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H GL EG FN+M+ + I PR +H + +V LFA +G AY + I+ N
Sbjct: 444 ACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNA 503
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
+W +L + + LG+ AA + + PE++ +++L+++Y+ A +WD+ K+RK+M
Sbjct: 504 SLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLM 563
Query: 609 KEKSLKKDTGCSWTELQNK 627
+E+S KK+ G S+ + K
Sbjct: 564 EERSTKKNAGYSFFQATKK 582
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 166/581 (28%), Positives = 294/581 (50%), Gaps = 3/581 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G +V L+ Y + +AQKLF+EMP+ NV+SW++L+ G+S G P
Sbjct: 872 VVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEV 931
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
LN ++ M + N T+ S+C D G ++ G + + G E + V+N LI+M
Sbjct: 932 LNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISM 991
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ + A +VFD E + ISW +++S+Y G L+ F R + +
Sbjct: 992 FSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTL 1051
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L C+ + NLK G IH LV K L+ + + L+ LY++ + + A VF +
Sbjct: 1052 SSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTE 1111
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL +W++++ Y Q GK + + + ++ G + + VTF+ L A ++ + I + +
Sbjct: 1112 RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIV 1171
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+LII GF F V N ++ Y K ++ E+ K M + D V+WNALI GH +
Sbjct: 1172 HALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEP 1231
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNI-SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA++ K + +G N T ++L S+ ++ G H IV GF+S+ + ++
Sbjct: 1232 NEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNS 1291
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+ MYAKCG LN + +FD L +K+ ++WN M+ A HG G EAL+I+ M+ + +
Sbjct: 1292 LITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLD 1351
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+F G L+A ++ ++EEG + ++ G + + + ++ G+ + +
Sbjct: 1352 QFSFSGGLAATANLAVLEEG-QQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKML 1410
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE 580
PI +++ W L+S H R ++L P+
Sbjct: 1411 -PQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPK 1450
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 259/490 (52%), Gaps = 1/490 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I + + N L+ MY KF I A+ +FDEM RN SWS ++SG+ ++G+ E A+
Sbjct: 771 IVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAV 830
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRG-DARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M +EPN + ++AC+ G A G ++HG + ++G+ + +V L++
Sbjct: 831 GLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHF 890
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YG GL+ +AQ +F+ + N +SW SL+ Y G L ++ R+ GV+ ++ +
Sbjct: 891 YGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTF 950
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+V +C +L + +G Q+ + + E VA LI++++ ++ A VF ++
Sbjct: 951 ATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNE 1010
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+A+I YA G E++ F M + T S +L + V GR +
Sbjct: 1011 CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGI 1070
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L++K+G S + NT+L YS+ E++ F M E D++SWN+++A ++
Sbjct: 1071 HGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKC 1130
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ +++L ++L G N T+++ L S+ + K H I+ GF +++G+AL
Sbjct: 1131 LDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNAL 1190
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V MY K G + +A+KV + + V+WN ++ G+A++ EA++ Y +++E I N
Sbjct: 1191 VTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANY 1250
Query: 481 NTFIGVLSAC 490
T + VL AC
Sbjct: 1251 ITMVSVLGAC 1260
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 140/480 (29%), Positives = 249/480 (51%), Gaps = 33/480 (6%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
+GK +H + L +N LINMY K G + A++VFD RN SW ++LS Y
Sbjct: 762 AGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYV 821
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL-KVGMQIHSLVFKCALEFDK 212
+ G + + +F GV + F AS++ AC+ G + G Q+H V K + D
Sbjct: 822 RVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDV 881
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
+V L++ Y + A ++F + ++ +W++L+ GY+ G E ++++ +M
Sbjct: 882 YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQE 941
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G+ ++ TF+ V + +++ + G Q+ II+ GF VAN+++ +S +EE+
Sbjct: 942 GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 1001
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC---PNLYTYSNILNIS 389
FD M+E D++SWNA+I+ A H+G E L+ + H N T S++L++
Sbjct: 1002 CYVFDHMNECDIISWNAMIS---AYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVC 1058
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
S + ++WG+ H +VK G DSNV I + L+ +Y++ GR DA VF ++ ++L+SWN
Sbjct: 1059 SSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWN 1118
Query: 450 TMLVGYAQHGLGREALEIYS-MMQENKIKPNDNTFIGVLSAC-----------VHIGLVE 497
+M+ Y Q G + L+I + ++Q K+ N TF L+AC VH ++
Sbjct: 1119 SMMACYVQDGKCLDGLKILAELLQMGKVM-NHVTFASALAACSNPECLIESKIVHALIIV 1177
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G+H F +I + ++V ++ G A + +++ P +P++V W L+ G
Sbjct: 1178 AGFHDF--LIVGN----------ALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG 1224
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/507 (28%), Positives = 251/507 (49%), Gaps = 12/507 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+IT+GF ++ L++ YVK + A+ +FD MPER+V+SW+A++SG+SQ G E A
Sbjct: 56 LITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKA 115
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M C ++ N +TY A+ AC S G ++ G + + N V + L++
Sbjct: 116 FVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDF 175
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ KCG + A ++F +ER+ +SW +++ Y G +F + G+ ++
Sbjct: 176 HSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTL 235
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A A G L + QIH ++ + V LIN YAK L A + +
Sbjct: 236 GSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLK 295
Query: 241 PDLTAWSALIGGYAQLG-KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
DL + +ALI GYA G + +A+DLF +M + +V +L A++ G Q
Sbjct: 296 KDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQ 355
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ +K S + N ++D Y+K +E++ + FDEM+E +V+SW +LI+G+ +
Sbjct: 356 IHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGY 415
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV-KPGFDSNVVIGS 418
A+ L K M +G PN T+ ++L S G + +V K S
Sbjct: 416 GHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYS 475
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG---LGREAL-EIYSMMQE 473
+VD++A+ G L +A + + K+ S W +L + +G LG+EA +++M E
Sbjct: 476 CMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPE 535
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGW 500
N + ++ + S GL ++ W
Sbjct: 536 NSV-----NYVVLASIYSAAGLWDDAW 557
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 143/284 (50%), Gaps = 9/284 (3%)
Query: 282 SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
++ L F+++ + G+ LH+ I + F NT+++ YSK +E + FDEM
Sbjct: 748 NFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRH 807
Query: 342 HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI-EWGKQ 400
+ SW+ +++G++ Y EA+ L M G PN + ++++ S + + G Q
Sbjct: 808 RNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ 867
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
H +VK G +V +G+ALV Y G + +A+K+F+ + N+VSW +++VGY+ G
Sbjct: 868 VHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGN 927
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE---GWHYFNSMIRDHGISPRMD 517
E L +Y M++ + N NTF V S+C GL+E+ G+ +I+ +G +
Sbjct: 928 PGEVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQ-YGFEDSVS 983
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
S++ +F+ A ++ E + + W ++S H
Sbjct: 984 VANSLISMFSSFSSVEEAC-YVFDHMNECDIISWNAMISAYAHH 1026
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/673 (32%), Positives = 366/673 (54%), Gaps = 7/673 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +V N L+ M+ FS + +A +FD M E ++ISW+A+IS ++ G+ +
Sbjct: 323 IIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRES 382
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M E N T +S C+S + + G+ IHG + + GL+ N + N L+ +
Sbjct: 383 LRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTL 442
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G A+ VF A ER+ ISW S+++ Y Q G+ + GLKI + G ++ +
Sbjct: 443 YSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTF 502
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS L AC+ L +H+L+ V L+ +Y K + A +V +
Sbjct: 503 ASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQ 562
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQ 299
PD W+ALIGG+A+ + EA+ + + G+ + +T VLGA + + + G
Sbjct: 563 PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMP 622
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ I+ GF S +V N+++ Y+KC L S FD + ++WNA++A A+ H
Sbjct: 623 IHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVA---ANAH 679
Query: 360 YG---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+G EA+++ +M G + +++S L ++++ +E G+Q H ++K GF+S++ +
Sbjct: 680 HGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHV 739
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+A +DMY KCG ++D K+ +++ +SWN ++ +A+HG ++A E + M +
Sbjct: 740 TNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 799
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+ TF+ +LSAC H GLV+EG Y++SM R+ G+ P ++H ++ L G+ A
Sbjct: 800 KPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAE 859
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
FIK P+ PN + WR LL+ C+ H +L L R AE +L DP D SA+++ SNV A +
Sbjct: 860 GFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSG 919
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W++ +RK M ++KK CSW +L++K+H F Q + + +L
Sbjct: 920 KWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTK 979
Query: 657 DGGYVPDPIYSSH 669
+ GYVPD ++ H
Sbjct: 980 EAGYVPDTSFALH 992
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 166/581 (28%), Positives = 294/581 (50%), Gaps = 3/581 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G +V L+ Y + +AQKLF+EMP+ NV+SW++L+ G+S G P
Sbjct: 222 VVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEV 281
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
LN ++ M + N T+ S+C D G ++ G + + G E + V+N LI+M
Sbjct: 282 LNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISM 341
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ + A +VFD E + ISW +++S+Y G L+ F R + +
Sbjct: 342 FSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTL 401
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L C+ + NLK G IH LV K L+ + + L+ LY++ + + A VF +
Sbjct: 402 SSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTE 461
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL +W++++ Y Q GK + + + ++ G + + VTF+ L A ++ + I + +
Sbjct: 462 RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIV 521
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+LII GF F V N ++ Y K ++ E+ K M + D V+WNALI GH +
Sbjct: 522 HALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEP 581
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNI-SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA++ K + +G N T ++L S+ ++ G H IV GF+S+ + ++
Sbjct: 582 NEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNS 641
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+ MYAKCG LN + +FD L +K+ ++WN M+ A HG G EAL+I+ M+ + +
Sbjct: 642 LITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLD 701
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+F G L+A ++ ++EEG + ++ G + + + ++ G+ + +
Sbjct: 702 QFSFSGGLAATANLAVLEEG-QQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKML 760
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE 580
PI +++ W L+S H R ++L P+
Sbjct: 761 P-QPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPK 800
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 143/482 (29%), Positives = 257/482 (53%), Gaps = 1/482 (0%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVC 69
+ N L+ MY KF I A+ +FDEM RN SWS ++SG+ ++G+ E A+ F M
Sbjct: 129 IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 188
Query: 70 CVLEPNYYTYVGAVSACASRG-DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+EPN + ++AC+ G A G ++HG + ++G+ + +V L++ YG GL+
Sbjct: 189 LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVY 248
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+AQ +F+ + N +SW SL+ Y G L ++ R+ GV+ ++ + A+V +C
Sbjct: 249 NAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCG 308
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+L + +G Q+ + + E VA LI++++ ++ A VF ++ D+ +W+A
Sbjct: 309 LLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNA 368
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I YA G E++ F M + T S +L + V GR +H L++K+G
Sbjct: 369 MISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG 428
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
S + NT+L YS+ E++ F M E D++SWN+++A ++ + +++L
Sbjct: 429 LDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILA 488
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
++L G N T+++ L S+ + K H I+ GF +++G+ALV MY K G
Sbjct: 489 ELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLG 548
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ +A+KV + + V+WN ++ G+A++ EA++ Y +++E I N T + VL
Sbjct: 549 MMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLG 608
Query: 489 AC 490
AC
Sbjct: 609 AC 610
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 140/480 (29%), Positives = 249/480 (51%), Gaps = 33/480 (6%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
+GK +H + L +N LINMY K G + A++VFD RN SW ++LS Y
Sbjct: 112 AGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYV 171
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL-KVGMQIHSLVFKCALEFDK 212
+ G + + +F GV + F AS++ AC+ G + G Q+H V K + D
Sbjct: 172 RVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDV 231
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
+V L++ Y + A ++F + ++ +W++L+ GY+ G E ++++ +M
Sbjct: 232 YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQE 291
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G+ ++ TF+ V + +++ + G Q+ II+ GF VAN+++ +S +EE+
Sbjct: 292 GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 351
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC---PNLYTYSNILNIS 389
FD M+E D++SWNA+I+ A H+G E L+ + H N T S++L++
Sbjct: 352 CYVFDHMNECDIISWNAMIS---AYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVC 408
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
S + ++WG+ H +VK G DSNV I + L+ +Y++ GR DA VF ++ ++L+SWN
Sbjct: 409 SSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWN 468
Query: 450 TMLVGYAQHGLGREALEIYS-MMQENKIKPNDNTFIGVLSAC-----------VHIGLVE 497
+M+ Y Q G + L+I + ++Q K+ N TF L+AC VH ++
Sbjct: 469 SMMACYVQDGKCLDGLKILAELLQMGKVM-NHVTFASALAACSNPECLIESKIVHALIIV 527
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G+H F +I + ++V ++ G A + +++ P +P++V W L+ G
Sbjct: 528 AGFHDF--LIVGN----------ALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG 574
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 143/284 (50%), Gaps = 9/284 (3%)
Query: 282 SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
++ L F+++ + G+ LH+ I + F NT+++ YSK +E + FDEM
Sbjct: 98 NFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRH 157
Query: 342 HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI-EWGKQ 400
+ SW+ +++G++ Y EA+ L M G PN + ++++ S + + G Q
Sbjct: 158 RNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ 217
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
H +VK G +V +G+ALV Y G + +A+K+F+ + N+VSW +++VGY+ G
Sbjct: 218 VHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGN 277
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE---GWHYFNSMIRDHGISPRMD 517
E L +Y M++ + N NTF V S+C GL+E+ G+ +I+ +G +
Sbjct: 278 PGEVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQ-YGFEDSVS 333
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
S++ +F+ A ++ E + + W ++S H
Sbjct: 334 VANSLISMFSSFSSVEEAC-YVFDHMNECDIISWNAMISAYAHH 376
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/610 (33%), Positives = 333/610 (54%), Gaps = 45/610 (7%)
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
+ A S C S D G+++ +M + N + N ++ K G L A +F + E
Sbjct: 62 IDAYSKCGSLED---GRQVFDKMPQR----NIYTWNSVVTGLTKLGFLDEADSLFRSMPE 114
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQI 199
R+ +W S++S + Q L F + K G ++E+S ASVL AC+ L ++ G+Q+
Sbjct: 115 RDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQV 174
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
HSL+ K D ++ L+++Y+KC ++ A RVF + ++ +W++LI + Q G A
Sbjct: 175 HSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPA 234
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG-FSSFTFVANT 318
EA+D+F M S + P EVT + V+ A A + G+++H ++K + ++N
Sbjct: 235 VEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNA 294
Query: 319 VLDFYSKCELLEESLKTFD-------------------------------EMDEHDVVSW 347
+D Y+KC ++E+ FD +M E +VVSW
Sbjct: 295 FVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSW 354
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
NALIAG+ + EA+ L + E CP Y+++NIL +D+ + G Q H ++K
Sbjct: 355 NALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLK 414
Query: 408 PGF------DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
GF + ++ +G++L+DMY KCG + + VF + ++ VSWN M++G+AQ+G G
Sbjct: 415 HGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYG 474
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
EALE++ M E+ KP+ T IGVLSAC H G VEEG HYF+SM RD G++P DH
Sbjct: 475 NEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTC 534
Query: 522 VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPED 581
+V L G A I+ P++P+ V+W LL+ CK H+++ LG+Y AEK+L +P +
Sbjct: 535 MVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSN 594
Query: 582 TSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQG 641
+ +++LSN+YAE W++ VRK M+++ + K GCSW ++Q H F + +
Sbjct: 595 SGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRK 654
Query: 642 IDLHEVMNQL 651
+H +++ L
Sbjct: 655 KQIHSLLDIL 664
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 246/494 (49%), Gaps = 48/494 (9%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N+ T+N ++ K +++A LF MPER+ +W++++SGF+Q E AL YF +M
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
N Y++ +SAC+ D G ++H + +S + ++ + L++MY KCG ++
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
AQ VFD +RN +SW SL++ + Q G V L +F + +S V E + ASV+ ACA
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264
Query: 189 VLGNLKVGMQIHSLVFKC-ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA-- 245
L +KVG ++H V K L D ++ +++YAKC ++ A +F ++ + ++ A
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 246 -----------------------------WSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
W+ALI GY Q G+ EA+ LF + + P
Sbjct: 325 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCP 384
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF------SSFTFVANTVLDFYSKCELLE 330
+ +F+ +L A AD+ E G Q H ++K GF FV N+++D Y KC +E
Sbjct: 385 THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVE 444
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
E F +M E D VSWNA+I G + + EA+EL ++ML G P+ T +L+
Sbjct: 445 EGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
Query: 391 DIPAIEWGKQTHCCI-----VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-N 444
+E G+ + V P D + +VD+ + G L +A+ + + + + +
Sbjct: 505 HAGFVEEGRHYFSSMTRDFGVAPLRDHY----TCMVDLLGRAGFLEEAKSMIEEMPMQPD 560
Query: 445 LVSWNTMLVGYAQH 458
V W ++L H
Sbjct: 561 SVIWGSLLAACKVH 574
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 196/390 (50%), Gaps = 40/390 (10%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S F +V + L+ MY K +NDAQ++FDEM +RNV+SW++LI+ F Q G AL+
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV-SNCLINMYG 122
F++M+ +EP+ T +SACAS + G+E+HGR+ ++ N + SN ++MY
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYA 300
Query: 123 KCGLLSSAQFVFDA-------------------------------SLERNSISWVSLLSS 151
KC + A+F+FD+ ERN +SW +L++
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF- 210
Y Q GE+ L +F L ++ V + +S A++L ACA L L +GMQ H V K +F
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQ 420
Query: 211 -----DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
D FV LI++Y KC ++ VF + D +W+A+I G+AQ G EA++L
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALEL 480
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK-MGFSSFTFVANTVLDFYS 324
F +M SG P +T VL A GR S + + G + ++D
Sbjct: 481 FREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLG 540
Query: 325 KCELLEESLKTFDEMD-EHDVVSWNALIAG 353
+ LEE+ +EM + D V W +L+A
Sbjct: 541 RAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 152/291 (52%), Gaps = 32/291 (10%)
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
R +H+ +IK GFS+ F+ N ++D YSKC LE+ + FD+M + ++ +WN+++ G
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 358 CHYGEAIELLKDMLFEGHCP-------------------------------NLYTYSNIL 386
EA L + M C N Y+++++L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+ S + + G Q H I K F S+V IGSALVDMY+KCG +NDA++VFD + +N+V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
SWN+++ + Q+G EAL+++ MM E++++P++ T V+SAC + ++ G +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+++ + + + V ++A + + A S PI N + ++SG
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISG 329
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 121/300 (40%), Gaps = 77/300 (25%)
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL-- 445
I S + AI + + H ++K GF + + I + L+D Y+KCG L D R+VFD + +N+
Sbjct: 30 IKSKLSAI-YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYT 88
Query: 446 -----------------------------VSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+WN+M+ G+AQH EAL ++MM +
Sbjct: 89 WNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGF 148
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWH--------------YFNSMIRD-----------HG 511
N+ +F VLSAC + + +G Y S + D
Sbjct: 149 VLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQR 208
Query: 512 ISPRM--DHIASVVHLFACRGQTRRA------YEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+ M ++ S L C Q A ++ + S +EP++V ++S C +
Sbjct: 209 VFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA 268
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYA----------EANMWDETAKVRKIMKEKSL 613
+ +G+ +++ D I+LSN + EA ++ +R ++ E S+
Sbjct: 269 IKVGQEVHGRVVKNDK--LRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSM 326
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/709 (30%), Positives = 364/709 (51%), Gaps = 53/709 (7%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEM--PERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
H++ MY+ F+ A + + V W+ LI +G E L +R M
Sbjct: 81 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 140
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
P++YT+ + AC R G +H ++ SG E N V N L++MYG+CG +A+
Sbjct: 141 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 200
Query: 132 FVFDASLER---NSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGAC 187
VFD ER + +SW S++++Y Q G+ + +K+F ++ G+ S +VL AC
Sbjct: 201 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 260
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A +G G Q+H + L D FV ++++YAKC ++ A++VF +++ D+ +W+
Sbjct: 261 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWN 320
Query: 248 ALIGGYAQLGK-----------------------------------ACEAIDLFVKMFSS 272
A++ GY+Q+G+ EA+D+F +M
Sbjct: 321 AMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLC 380
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS-------SFTFVANTVLDFYSK 325
G P+ VT +L A + G++ H IK + V N ++D YSK
Sbjct: 381 GSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSK 440
Query: 326 CELLEESLKTFDEMDEHD--VVSWNALIAGHLASCHYGEAIELLKDMLFEGH--CPNLYT 381
C+ + + FD + D VV+W LI G+ EA+EL ML + PN +T
Sbjct: 441 CKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFT 500
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV-IGSALVDMYAKCGRLNDARKVFDHL 440
S L + + A+ +G+Q H +++ F+S ++ + + L+DMY+K G ++ AR VFD++
Sbjct: 501 ISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNM 560
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+N VSW +++ GY HG G EAL+I+ MQ+ + P+ TF+ VL AC H G+V++G
Sbjct: 561 HQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGI 620
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKT 560
+YFN M +D G+ P +H A +V L + G+ A E I+ P++P VW LLS C+
Sbjct: 621 NYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRV 680
Query: 561 HKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCS 620
+ ++ LG YAA ++L + + ++ +LSN+YA A W + A++R +MK +KK GCS
Sbjct: 681 YANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCS 740
Query: 621 WTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
W + + F ++ +++++ L + GYVPD ++ H
Sbjct: 741 WVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALH 789
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 237/498 (47%), Gaps = 58/498 (11%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNV---ISWSALISGFSQIGMP 57
+ SGF NV N L+ MY + +A+++FDEM ER V +SW+++++ + Q G
Sbjct: 171 VFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDS 230
Query: 58 EVALNYFRLMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
A+ F M + + P+ + V + ACAS G GK++HG RSGL + V N
Sbjct: 231 IRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNA 290
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+++MY KCG++ A VF+ ++ +SW ++++ Y Q G L +F R+ + ++
Sbjct: 291 VVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELN 350
Query: 177 EFSCASV-----------------------------------LGACAVLGNLKVGMQIHS 201
+ ++V L CA G L G + H
Sbjct: 351 VVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHC 410
Query: 202 LVFKCALEFDK-------FVAMGLINLYAKCEKLDLASRVFSNIQLPD--LTAWSALIGG 252
K L D+ V LI++Y+KC+ A +F I D + W+ LIGG
Sbjct: 411 HAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGG 470
Query: 253 YAQLGKACEAIDLFVKMFSSG--LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF- 309
AQ G+A EA++LF +M +MP+ T S L A A + GRQ+H+ +++ F
Sbjct: 471 NAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFE 530
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
S+ FVAN ++D YSK ++ + FD M + + VSW +L+ G+ EA+++ +
Sbjct: 531 SAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYE 590
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA----LVDMYA 425
M P+ T+ +L S ++ G + K D VV G+ +VD+ +
Sbjct: 591 MQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNK---DFGVVPGAEHYACMVDLLS 647
Query: 426 KCGRLNDARKVFDHLSSK 443
+ GRL++A ++ + K
Sbjct: 648 RAGRLDEAMELIRGMPMK 665
>gi|255583011|ref|XP_002532274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528034|gb|EEF30114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 631
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/632 (34%), Positives = 334/632 (52%), Gaps = 48/632 (7%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARS 94
MPERN+ISWS+++S +S+ G E AL F CC PN Y +SAC G +
Sbjct: 1 MPERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACVQVGGSID 60
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
K++HG +SG + N +V L+++Y K G + A+ VFD LE+++++W +++++ +
Sbjct: 61 -KQMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVK 119
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
G L++F R++ V + +SVLGAC+ L ++ G QIH V + +E D
Sbjct: 120 RGRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSF 179
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
LI+ Y K K+ A ++F + ++ +W+A+I GY Q EA+ LF++M G
Sbjct: 180 VNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGR 239
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
P + +L + ++ GRQ+H+ IK S F+ N ++D Y+KC L ++ K
Sbjct: 240 RPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARK 299
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
FD+M +VVS+NALI G+ EA+ L ++M P+ T+ ++L S+ + A
Sbjct: 300 VFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSA 359
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
+E GKQ H I K G + GSAL+D Y+KC L DAR VFD ++ K++V WN ML G
Sbjct: 360 LELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFG 419
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI--------------------- 493
Y Q EAL++Y+ +Q ++ KPN TF + +A ++
Sbjct: 420 YTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSH 479
Query: 494 ------------------------GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
G V++G HYF SM + I P +H A VV L
Sbjct: 480 PFTTNSLIDMYAKCGSLEDARKAFGHVKDGLHYFESMPK-FSIKPGTEHYACVVSLLGRS 538
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
G+ A EFI+ P EP VVWR LLS C+ ++ LG+YAAEK +S D D+ ++ +LS
Sbjct: 539 GKLYEAKEFIEKMPTEPEAVVWRSLLSACRVSGNVELGKYAAEKAISIDSTDSGSYTLLS 598
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSW 621
N+YA MW + KVR+ M + K+ G SW
Sbjct: 599 NIYASKGMWVDVKKVRERMDIAGVVKEAGHSW 630
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 179/336 (53%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V N L+ Y K ++ A+KLFD M +RNVISW+A+I+G+ Q A
Sbjct: 168 VLRRGIEIDVSFVNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREA 227
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M P+ + +++C S G+++H + +E + + N LI+M
Sbjct: 228 VKLFIEMTRLGRRPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDM 287
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L+ A+ VFD RN +S+ +L+ Y + + +F R ++ S +
Sbjct: 288 YAKCGSLNDARKVFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTF 347
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+LGA A L L++G QIH+L+ K + + F LI+ Y+KC L A VF +
Sbjct: 348 VSLLGASATLSALELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTE 407
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+A++ GY Q + EA+ L+ ++ S P+ VTF+ + A +++ G+Q
Sbjct: 408 KDIVVWNAMLFGYTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQF 467
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
H+ IIK G S F N+++D Y+KC LE++ K F
Sbjct: 468 HNHIIKTGLDSHPFTTNSLIDMYAKCGSLEDARKAF 503
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/693 (30%), Positives = 350/693 (50%), Gaps = 49/693 (7%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N++ N L+ Y + ++DA LFD M R+ +SWS ++ GF+++G F
Sbjct: 108 GMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTF 167
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R ++ C P+ YT + AC R K + L++MY KC
Sbjct: 168 RELIRCGARPDNYTLPFVIRAC------RDLKNLQ---------------MALVDMYVKC 206
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ A+F+FD ER+ ++W ++ Y +CG+ L +F R+ GV + + +V+
Sbjct: 207 REIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVV 266
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA LG + I + + + D + +I++YAKC ++ A +F ++ ++
Sbjct: 267 FACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVI 326
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+WSA+I Y G+ +A+DLF M SSG++P ++T + +L A + + RQ+H+
Sbjct: 327 SWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQA 386
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG----------- 353
G VAN ++ FYS L+++ FD M D VSW+ ++ G
Sbjct: 387 SVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCF 446
Query: 354 ----HLASC-------------HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
L C + E++ L M EG P+ ++ + + A+
Sbjct: 447 GTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMH 506
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
+ I + F +V++G+A++DM+AKCG + AR++FD + KN++SW+ M+ Y
Sbjct: 507 KARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYG 566
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
HG GR+AL+++ MM + I PN T + +L AC H GLVEEG +F+ M D+ + +
Sbjct: 567 YHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADV 626
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
H VV L G+ A + I+S +E ++ +W L C+THKD+VL AA +L
Sbjct: 627 KHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLE 686
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRF 636
P++ +I+LSN+YA A W++ AK R +M ++ LKK G +W E+ NK H FS
Sbjct: 687 LQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDT 746
Query: 637 AQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ +++E++ L L GYVPD + H
Sbjct: 747 THPRSKEIYEMLKSLGNKLELVGYVPDTNFVLH 779
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 216/457 (47%), Gaps = 36/457 (7%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L P +Y + A+ C + R ++H + G+ N V+N LI Y L A
Sbjct: 79 LNPKFY--ISALVNCRNLTQVR---QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAY 133
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
+FD R+S+SW ++ + + G++++ F + G ++ V+ AC L
Sbjct: 134 GLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLK 193
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
NL+ M L+++Y KC +++ A +F +Q DL W+ +IG
Sbjct: 194 NLQ---------------------MALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIG 232
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
GYA+ GKA E++ LF KM G++P +V V+ A A + R + I + F
Sbjct: 233 GYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQL 292
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
+ ++D Y+KC +E + + FD M+E +V+SW+A+IA + +A++L + ML
Sbjct: 293 DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMML 352
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
G P+ T +++L + + +Q H G N+++ + LV Y+ L+
Sbjct: 353 SSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALD 412
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
DA +FD + ++ VSW+ M+ G+A+ G + + +P++ T L C
Sbjct: 413 DAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYT----LPFC- 467
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
G E F+ M R+ G+ P D +A V +FAC
Sbjct: 468 --GNANESLVLFDKM-REEGVVP--DKVAMVTVVFAC 499
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/492 (40%), Positives = 292/492 (59%), Gaps = 6/492 (1%)
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
C ++L C L L G IH+L+ D + L+NLYAKC L A ++F +
Sbjct: 18 CHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMS 77
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET--IGG 297
D+ W+ALI GY+Q + +A+ L +M GL P++ T + +L A + V T + G
Sbjct: 78 SRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQG 137
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
RQLH L ++ G+ S +V+ +LD Y++C LEE+ FD M + VSWNALIAG+
Sbjct: 138 RQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+A L +ML E P +TYS++L + + ++E GK H ++K G +G
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ L+DMYAK G + DA+KVFD L+ +++VSWN+ML GY+QHGLG+ AL+ + M +I
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIA 317
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
PND TF+ VL+AC H GL++EG HYF+ M++ + + P++ H ++V L G RA +
Sbjct: 318 PNDITFLCVLTACSHAGLLDEGRHYFD-MMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQ 376
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FI PI+P VW LL C+ HK++ LG YAAE I D H++L N+YA A
Sbjct: 377 FISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGR 436
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
W++ AKVRK+MKE +KK+ CSW E++N++H F A Q ++H + Q+S + +
Sbjct: 437 WNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKE 496
Query: 658 GGYVPDPIYSSH 669
GYVPD SSH
Sbjct: 497 IGYVPD---SSH 505
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 214/439 (48%), Gaps = 39/439 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S F +++ N LL +Y K + A+KLFDEM R+V++W+ALI+G+SQ P+ A
Sbjct: 41 LLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDA 100
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRG--DARSGKEIHGRMYRSGLELNSHVSNCLI 118
L M+ L+PN +T + A + G D G+++HG R G + N +VS ++
Sbjct: 101 LLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAIL 160
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+MY +C L AQ +FD + +N +SW +L++ Y + G+ +F + V + F
Sbjct: 161 DMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHF 220
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +SVL ACA +G+L+ G +H+L+ K + FV L+++YAK ++ A +VF +
Sbjct: 221 TYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRL 280
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +W++++ GY+Q G A+ F +M + + P+++TF VL A + GR
Sbjct: 281 AKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGR 340
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLAS 357
++ K T++D + L+ +++ EM + W AL+
Sbjct: 341 HYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLG----- 395
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
A + K+M G Y I + S P TH
Sbjct: 396 -----ACRMHKNMELGG-----YAAECIFELDSHYPG------THV-------------- 425
Query: 418 SALVDMYAKCGRLNDARKV 436
L ++YA GR NDA KV
Sbjct: 426 -LLYNIYALAGRWNDAAKV 443
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 187/376 (49%), Gaps = 3/376 (0%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
C GK IH + S + + N L+N+Y KCG L A+ +FD R+ ++W
Sbjct: 25 CTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTW 84
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV--GMQIHSLV 203
+L++ Y Q L + + G+ ++F+ AS+L A + +G+ V G Q+H L
Sbjct: 85 TALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLC 144
Query: 204 FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
+ + + +V+ ++++YA+C L+ A +F + + +W+ALI GYA+ G+ +A
Sbjct: 145 LRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAF 204
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
LF M + P+ T+S VL A A + G+ +H+L+IK G FV NT+LD Y
Sbjct: 205 CLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMY 264
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+K +E++ K FD + + DVVSWN+++ G+ A++ ++ML PN T+
Sbjct: 265 AKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFL 324
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+L S ++ G+ + K + + +VD+ + G L+ A + + K
Sbjct: 325 CVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIK 384
Query: 444 NLVS-WNTMLVGYAQH 458
+ W +L H
Sbjct: 385 PTAAVWGALLGACRMH 400
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/569 (32%), Positives = 324/569 (56%), Gaps = 2/569 (0%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
C+ G G ++H G + ++N LI+MYGKC + A VFD LERN +SW
Sbjct: 14 CSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSW 73
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+L+ Y Q G L + SGV +EF+ ++ L AC LG ++ GMQIH + K
Sbjct: 74 TALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVK 133
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
E+ V I++Y+KC ++ +A +VF+ + +L +W+A+I G+ G +++ L
Sbjct: 134 SGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVL 193
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF--SSFTFVANTVLDFY 323
F +M G +P E TF+ L A + GG Q+H+ +I GF S +A+ ++D Y
Sbjct: 194 FQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLY 253
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+KC L E+ K FD +++ +++SW+ALI G + EA++L + + + + S
Sbjct: 254 AKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLS 313
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
++ + +D+ +E GKQ HC I+K ++ + ++++DMY KCG +A ++F + +
Sbjct: 314 IMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVR 373
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
N+VSW M+ GY +HGLG +A+ +++ MQ + I+ ++ ++ +LSAC H GL+ E YF
Sbjct: 374 NVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYF 433
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+ + +H + P ++H A +V + GQ + A I++ ++PN+ +W+ LLS C+ H +
Sbjct: 434 SRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGN 493
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
L +GR E + D ++ ++M+SN+YAEA W E +VRK++K K LKK+ G SW E
Sbjct: 494 LEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVE 553
Query: 624 LQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
+ ++H+F +HE++ ++
Sbjct: 554 INKEIHFFYGGDDTHPLTEKIHEMLKEME 582
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 256/487 (52%), Gaps = 16/487 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF ++I N L+ MY K SR++ A +FD M ERNV+SW+AL+ G+ Q G + +L
Sbjct: 31 VNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSL 90
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
M ++PN +T+ ++ AC + G +G +IHG +SG E S V N I+MY
Sbjct: 91 ALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMY 150
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A+ VF+ RN +SW ++++ + G L +F + G EF+
Sbjct: 151 SKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFT 210
Query: 182 SVLGACAVLGNLKVGMQIH-SLVFKC-ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S L AC LG ++ G QIH SL+ + + +A +++LYAKC L A +VF I+
Sbjct: 211 STLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIE 270
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+L +WSALI G+AQ G EA+DLF ++ S S ++G FAD+ G+Q
Sbjct: 271 QKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQ 330
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H I+K+ VAN+++D Y KC L EE+ + F EM +VVSW +I G+
Sbjct: 331 MHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGL 390
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ--THCC---IVKPGFDSNV 414
+AI L M +G + Y +L+ S I ++ + C +KP N+
Sbjct: 391 GEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKP----NI 446
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG---LGREALEI-YS 469
+ +VD+ + G+L +A+ + +++ K N W T+L HG +GRE EI +
Sbjct: 447 EHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFR 506
Query: 470 MMQENKI 476
M +N +
Sbjct: 507 MDTDNPV 513
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 205/384 (53%), Gaps = 6/384 (1%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L C+ G G+Q+H+ FD + LI++Y KC ++DLA VF +
Sbjct: 8 AKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLE 67
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+AL+ GY Q G A ++ L +M SG+ P+E TFS L A + G Q+
Sbjct: 68 RNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQI 127
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + +K GF + V N +D YSKC + + + F++M ++VSWNA+IAGH +
Sbjct: 128 HGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNG 187
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV--VIGS 418
+++ L + M +G P+ +T+++ L + AI G Q H ++ GF ++ +I S
Sbjct: 188 RKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIAS 247
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
A+VD+YAKCG L +A+KVFD + KNL+SW+ ++ G+AQ G EA++++ ++E+
Sbjct: 248 AIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNV 307
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIR-DHGISPRMDHIASVVHLFACRGQTRRAYE 537
+ ++ + LVE+G +++ G+ + + S++ ++ G T A
Sbjct: 308 DGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVAN--SIIDMYLKCGLTEEAER 365
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTH 561
+ N V W +++G H
Sbjct: 366 LFSEMQVR-NVVSWTVMITGYGKH 388
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/659 (31%), Positives = 350/659 (53%), Gaps = 5/659 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N L+ MY KF + A K+FD+MP+RN++SW++++ + G+ E + F+ ++
Sbjct: 230 DVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLL 289
Query: 69 CCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
L P+ T V + CA +G+ R G HG + GL V++ L++MY KCG
Sbjct: 290 NGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGY 349
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLG 185
L A+ +FD + E+N ISW S++ Y + + ++ + + V ++E + +VL
Sbjct: 350 LCEARVLFDTN-EKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLP 408
Query: 186 ACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C +IH + ++ D+ VA + YAKC L A VF ++ ++
Sbjct: 409 VCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVS 468
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ALIGG+ Q G +A+DL++ M SGL P T + +L A A +K G+++H +
Sbjct: 469 SWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSM 528
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
++ GF F+ +++ Y +C + + FD M+E ++V WN +I G + +A+
Sbjct: 529 LRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDAL 588
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ ML P+ + L S + A+ GK+ HC VK + + +L+DMY
Sbjct: 589 DMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMY 648
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG + ++ +FD + K V+WN ++ GY HG GR+A+E++ MQ +P+ TFI
Sbjct: 649 AKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFI 708
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
+L+AC H GLV EG Y M GI P+++H A VV + G+ A E + P
Sbjct: 709 ALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPD 768
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+P+ +W LLS C+ ++DL +G A K+L P+ ++++SN YA WDE K+
Sbjct: 769 KPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKM 828
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
R+ MKE L+KD GCSW E+ K+ F + Q + + + +L + GY PD
Sbjct: 829 RQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPD 887
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 169/598 (28%), Positives = 292/598 (48%), Gaps = 40/598 (6%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F +V+ L+ MY D+ +F+ +N+ W+AL+SG+ + + A+ F
Sbjct: 125 FQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFV 184
Query: 66 LMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ P+ +T + AC D R G+ +HG ++ + + V N LI MYGK
Sbjct: 185 EMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKF 244
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCG--EHVHGLKIFLLSRKSGVAISEFSCAS 182
G + SA VFD +RN +SW S++ + + G E +GL LL+ G+ + +
Sbjct: 245 GFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVT 304
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
V+ CA G +++GM H L K L + V L+++Y+KC L +RV + +
Sbjct: 305 VIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYL-CEARVLFDTNEKN 363
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ +W+++IGGY++ A +L KM + +EVT VL + + + +++H
Sbjct: 364 VISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIH 423
Query: 302 SLIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
++ GF S VAN + Y+KC L + F M+ V SWNALI GH+ +
Sbjct: 424 GYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFP 483
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A++L M G P+L+T +++L+ + + ++ GK+ H +++ GF+ + I +L
Sbjct: 484 RKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISL 543
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V +Y +CG++ A+ FD++ KNLV WNTM+ G++Q+ +AL+++ M +KI P++
Sbjct: 544 VSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDE 603
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDH------------------GISPRMDHIASV 522
+ IG L AC + + G ++ H G + +I
Sbjct: 604 ISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDR 663
Query: 523 VHL------------FACRGQTRRAYEFIKS---SPIEPNKVVWRCLLSGCKTHKDLV 565
VHL + G R+A E KS + P+ V + LL+ C H LV
Sbjct: 664 VHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTAC-NHAGLV 720
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 133/258 (51%), Gaps = 14/258 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ +GF + L+ +YV+ +I A+ FD M E+N++ W+ +I+GFSQ P A
Sbjct: 528 MLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDA 587
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ + P+ + +GA+ AC+ R GKE+H +S L +S V+ LI+M
Sbjct: 588 LDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDM 647
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLK---IFLLSRKSGVAISE 177
Y KCG + +Q +FD + ++W L++ Y G H HG K +F + +G
Sbjct: 648 YAKCGCMEQSQNIFDRVHLKGEVTWNVLITGY---GIHGHGRKAIELFKSMQNAGFRPDS 704
Query: 178 FSCASVLGACAVLGNLKVGM----QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+ ++L AC G + G+ Q+ SL F + + + ++++ + +L+ A
Sbjct: 705 VTFIALLTACNHAGLVAEGLEYLGQMQSL-FGIKPKLEHYAC--VVDMLGRAGRLNEALE 761
Query: 234 VFSNI-QLPDLTAWSALI 250
+ + + PD WS+L+
Sbjct: 762 LVNELPDKPDSRIWSSLL 779
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 136/289 (47%), Gaps = 10/289 (3%)
Query: 297 GRQLHSLI-IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
GR++H+ I F + + ++ YS C+ +S F+ ++ WNAL++G+L
Sbjct: 112 GRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYL 171
Query: 356 ASCHYGEAIELLKDML-FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ + +A+ + +M+ P+ +T ++ + + G+ H +K S+V
Sbjct: 172 RNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDV 231
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS--MMQ 472
+G+AL+ MY K G + A KVFD + +NLVSWN+++ ++G+ E+ ++ +
Sbjct: 232 FVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNG 291
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+ + P+ T + V+ C G V G F+ + G+ + +S++ +++ G
Sbjct: 292 DEGLMPDVATMVTVIPLCARQGEVRLGM-VFHGLALKLGLCGELKVNSSLLDMYSKCGYL 350
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPED 581
A ++ E N + W ++ G +D R A E + ED
Sbjct: 351 CEARVLFDTN--EKNVISWNSMIGGYSKDRDF---RGAFELLRKMQMED 394
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/659 (31%), Positives = 356/659 (54%), Gaps = 5/659 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLF--DEMPERNVISWSALISGFSQIGMPE 58
+ + GF N++ L+ Y A+ +F ++ P +V W+AL+S ++
Sbjct: 29 IFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCP-LDVSLWNALLSAYTNNFRFV 87
Query: 59 VALNYFRLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
AL F + C + P++YTY + AC G G+ IH + ++GL + V + L
Sbjct: 88 EALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSL 147
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+NMY KC A +FD +R+ W +++S Y + G+ LK F ++ G +
Sbjct: 148 MNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNS 207
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ V+ +C L NL+ G ++H + + + D FV L+++Y KC L++A VF
Sbjct: 208 VTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEK 267
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
I + W+A+I GY+ G + I+L ++M G P+ +T + ++ A + + G
Sbjct: 268 IPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHG 327
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+ +H I++ F+ +++DFY KC + + F + +++VVSWN +I+GH+
Sbjct: 328 KFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMV 387
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
++ +A+ + +M P+ T+S+ L+ S + A++ G++ H CI+ ++N ++
Sbjct: 388 GNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVM 447
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
AL+DMYAKCG +++ARK+F L ++LVSW +M+ Y HG EAL ++ MQ+ ++
Sbjct: 448 GALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVR 507
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
+ TF+ VLSAC H GLV+EG+ YFN M+ + I P ++H + ++ L G+ AYE
Sbjct: 508 ADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYE 567
Query: 538 FIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
++ S + + + L S C H + VLG + ++ DP+D S +I+LSN+YA N
Sbjct: 568 ILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYASVN 627
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
WDE KVR+ MKE LKK GCSW E+ ++H F + ++E +N L H+
Sbjct: 628 KWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFAEDKSNPLADGVYECLNILGCHM 686
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 151/491 (30%), Positives = 249/491 (50%), Gaps = 8/491 (1%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
+Y T + A+ C S + GK IH R++ G + N +S LI Y C +SA+ VF
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 135 DASLERNSIS-WVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGN 192
+ +S W +LLS+Y V L++F L+ S V ++ VL AC LG
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+ G +IH+ + K L +D FV L+N+YAKC++ A ++F D+ W+A+I
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISC 181
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y + GKA A+ F KM G P+ VTF+ V+ + + G+++H +I+
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLD 241
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
FV + ++D Y KC LE + + F+++ + ++WNA+I G+ IELL M
Sbjct: 242 AFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMND 301
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EG P L T ++I+ SS + GK H I++ D ++ I +L+D Y KCG ++
Sbjct: 302 EGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSS 361
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A +F +S +VSWN M+ G+ G +AL IY M+E+ +KP+ TF LSAC
Sbjct: 362 AETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQ 421
Query: 493 IGLVEEG--WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
+ +++G HY I +H + + +++ ++A G A + P + + V
Sbjct: 422 LAALDKGRELHY---CIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLP-KRDLVS 477
Query: 551 WRCLLSGCKTH 561
W ++ +H
Sbjct: 478 WTSMIFAYGSH 488
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/645 (31%), Positives = 356/645 (55%), Gaps = 1/645 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEVALNYFRLMVCCVLEP 74
L+ Y K R +A+ LF ++ +R N+++W+ +I GF + G+ E +L Y+ L ++
Sbjct: 180 LIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKV 239
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
++ +SAC GK++H + G E + +V L+ MYGKC ++ SA+ VF
Sbjct: 240 VSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVF 299
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
+ ++ W +L+S+Y G L+I+ + V F+ +VL + ++ G
Sbjct: 300 NEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYD 359
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
+G IH+ + K L+ + L+ +Y+K + A+ +FS ++ D+ AW ++I G+
Sbjct: 360 LGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFC 419
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q K EA+D F M + + P + ++ A +++ G +H +IK G F
Sbjct: 420 QNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVF 479
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
VA+++LD YSK E + F +M ++V+WN++I+ + + +I L +L
Sbjct: 480 VASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRND 539
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P+ +++++L S + A+ GK H +V+ ++ + + L+DMY KCG L A+
Sbjct: 540 LYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQ 599
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+F+ +S KNLV+WN+M+ GY HG +A+E++ M+ + IKP+D TF+ +LS+C H G
Sbjct: 600 HIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSG 659
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
L+EEG H F M GI PRM+H ++V L+ G AY F+K+ P+EP++ +W L
Sbjct: 660 LIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSL 719
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
L CK H +L LG A K+L+ +P S ++ L N+Y EA +WD TA +R MKEK LK
Sbjct: 720 LCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLK 779
Query: 615 KDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
K GCSW E++NK+ F + + ++++ ++ L ++ G
Sbjct: 780 KTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLSSLKRNMIKKG 824
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/604 (25%), Positives = 282/604 (46%), Gaps = 60/604 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-----NVISWSALISGFSQIG 55
+IT+G H + + L+ +YVK DA K+FD++P+ +V W+++I G+ + G
Sbjct: 79 IITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFG 138
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
E + F M S G + GK+IH + R+ L + +
Sbjct: 139 QLEEGMVQFGRM-------------------QSSG-YKEGKQIHSYIVRNMLNFDPFLET 178
Query: 116 CLINMYGKCGLLSSAQFVFDASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
LI+ Y KCG + A+++F +R N ++W ++ + + G + L+ +LL++ V
Sbjct: 179 ALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVK 238
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ S L AC + G Q+H K E D +V L+ +Y KC+ ++ A +V
Sbjct: 239 VVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKV 298
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F+ + ++ W+ALI Y G A +A+ ++ +M ++ T VL + +
Sbjct: 299 FNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLY 358
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
GR +H+ I+K S + + +L YSK + F M E DVV+W ++I+G
Sbjct: 359 DLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGF 418
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ Y EA++ + M + P+ ++I++ + + ++ G H ++K G +V
Sbjct: 419 CQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDV 478
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ S+L+DMY+K G A +F + KNLV+WN+++ Y ++ L ++ ++S + N
Sbjct: 479 FVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRN 538
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEG----------WHYFNSMIRDH--------GISPRM 516
+ P+ +F VL+A + + +G W F+ + + G+
Sbjct: 539 DLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYA 598
Query: 517 DHI------------ASVVHLFACRGQTRRAYEF---IKSSPIEPNKVVWRCLLSGCKTH 561
HI S++ + G+ +A E ++SS I+P+ V + LLS C H
Sbjct: 599 QHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSC-NH 657
Query: 562 KDLV 565
L+
Sbjct: 658 SGLI 661
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 246/487 (50%), Gaps = 30/487 (6%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
+TY + ACAS + + GK IH + +GL + ++++ LIN+Y KCG + A VFD
Sbjct: 54 FTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFD- 112
Query: 137 SLERNSIS------WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
L ++ +S W S++ Y + G+ G+ F + SG
Sbjct: 113 QLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSG------------------ 154
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-LPDLTAWSAL 249
K G QIHS + + L FD F+ LI+ Y KC + A +F ++ ++ AW+ +
Sbjct: 155 --YKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVM 212
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
IGG+ + G +++ ++ + + +F+ L A + G+Q+H IK+GF
Sbjct: 213 IGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGF 272
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
+V ++L Y KC+++E + K F+E+ + ++ WNALI+ ++ + + +A+ + K
Sbjct: 273 EDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQ 332
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M + +T N+L SS + G+ H IVK S++ I SAL+ MY+K G
Sbjct: 333 MKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGD 392
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
N A +F + +++V+W +++ G+ Q+ +EAL+ + M+ + +KP+ + ++SA
Sbjct: 393 SNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISA 452
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C + V+ G +I+ G+ + +S++ +++ G RA P++ N V
Sbjct: 453 CTGLEKVDLGCTIHGFVIKS-GLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLK-NLV 510
Query: 550 VWRCLLS 556
W ++S
Sbjct: 511 AWNSIIS 517
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 224/433 (51%), Gaps = 1/433 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF + + LL MY K I A+K+F+E+P++ + W+ALIS + G AL
Sbjct: 268 IKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDAL 327
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
++ M C + + +T + +++ + G G+ IH + + L+ + + + L+ MY
Sbjct: 328 RIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMY 387
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G + A +F ER+ ++W S++S +CQ ++ L F V A
Sbjct: 388 SKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMA 447
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S++ AC L + +G IH V K L+ D FVA L+++Y+K + A +FS++ L
Sbjct: 448 SIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLK 507
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+L AW+++I Y + +I+LF ++ + L P V+F+ VL A + V + G+ +H
Sbjct: 508 NLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVH 567
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
++++ V NT++D Y KC LL+ + F+ + E ++V+WN++I G+ +
Sbjct: 568 GYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECS 627
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFDSNVVIGSAL 420
+AIEL +M G P+ T+ ++L+ + IE G + +K G + + +
Sbjct: 628 KAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNI 687
Query: 421 VDMYAKCGRLNDA 433
VD+Y + G L DA
Sbjct: 688 VDLYGRAGCLGDA 700
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 203/421 (48%), Gaps = 32/421 (7%)
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
+ S Q +++ LK++ KS V + F+ S+L ACA L NL+ G IHS + L
Sbjct: 28 IKSLVQQRQYIEALKLY---TKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVF-----SNIQLPDLTAWSALIGGYAQLGKACEAI 263
D+++ LIN+Y KC A +VF S + + D+T W+++I GY + G+ E +
Sbjct: 85 HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGM 144
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
F +M SSG KE G+Q+HS I++ + F+ ++D Y
Sbjct: 145 VQFGRMQSSGY-----------------KE---GKQIHSYIVRNMLNFDPFLETALIDTY 184
Query: 324 SKCELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
KC E+ F ++ D ++V+WN +I G + + ++E E ++
Sbjct: 185 FKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSF 244
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+ L+ + +GKQ HC +K GF+ + + ++L+ MY KC + A KVF+ +
Sbjct: 245 TCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPD 304
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
K + WN ++ Y +G +AL IY M+ + + T + VL++ GL + G
Sbjct: 305 KEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLG-RL 363
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG-CKTH 561
++ I + + ++++ +++ G + A I S+ E + V W ++SG C+
Sbjct: 364 IHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANS-IFSTMKERDVVAWGSVISGFCQNR 422
Query: 562 K 562
K
Sbjct: 423 K 423
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 135/252 (53%), Gaps = 2/252 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG +V + LL MY KF A +F +MP +N+++W+++IS + + +P+++
Sbjct: 469 VIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLS 528
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+N F ++ L P+ ++ ++A +S GK +HG + R + + V N LI+M
Sbjct: 529 INLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDM 588
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCGLL AQ +F+ E+N ++W S++ Y GE +++F R SG+ + +
Sbjct: 589 YIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTF 648
Query: 181 ASVLGACAVLGNLKVGMQIHSLV-FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L +C G ++ G+ + ++ K +E + +++LY + L A N+
Sbjct: 649 LSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMP 708
Query: 240 L-PDLTAWSALI 250
+ PD + W +L+
Sbjct: 709 VEPDRSIWLSLL 720
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/648 (32%), Positives = 353/648 (54%), Gaps = 11/648 (1%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVC 69
+ N L++ Y K S A+++FDE+P+++V SW+ L+ G ++ G ++YF ++
Sbjct: 98 TVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILG 157
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
C + P+ Y A+ AC G+ +H ++ G + V+ L+ MY K G +
Sbjct: 158 CDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGD 217
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
+ VF++ RN +SW +++S + G + FL + + SV A
Sbjct: 218 SCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQ 277
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF-SN-----IQLPDL 243
LG+++ G I+ + F+ ++ + V LI+++AKC + + VF SN + LP
Sbjct: 278 LGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLP-- 335
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W+A+I G+ G EA+ LF++M + + T+ L + AD++ +QLH +
Sbjct: 336 --WNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGM 393
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
I K G S + N ++D Y+KC L+ K FD +E + +SW L+ + S + +A
Sbjct: 394 IWKSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDA 452
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ + M G PN T+S +L + + ++E+G+Q H K GF + + S L+DM
Sbjct: 453 LSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDM 512
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
YAKCG + DA KVF+ L +++SW M+ GYAQHG+ ++ALE++ M+ PN TF
Sbjct: 513 YAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATF 572
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ +L AC H GLV+EG YF+ M +G+ P ++H A VV + G+ A++FI P
Sbjct: 573 LCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMP 632
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
IEP++ VW LL C+ H ++ L + AA+K+LS +P+D +A ++LSN Y EA +
Sbjct: 633 IEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLN 692
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
VR +MK ++++K+TG SW + K+H F + Q D+++ +N L
Sbjct: 693 VRNMMKSQAMRKETGMSWICIGGKIHKFCSGDQYHPQKDDIYKTLNVL 740
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 233/463 (50%), Gaps = 5/463 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+IT GF LL MY K RI D+ K+F+ + RN +SW+A+ISGF G+ A
Sbjct: 190 VITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEA 249
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
N F M+ + PN ++ A GD G+ I+ + G++ N HV LI+M
Sbjct: 250 YNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDM 309
Query: 121 YGKCGLLSSAQFVFDASLERNSIS--WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+ KCG ++ + VF ++ ++ W +++S + G + +FL ++ + +
Sbjct: 310 FAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVY 369
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S L + A + +L+ Q+H +++K + L++ YAKC +LD ++F
Sbjct: 370 TYCSTLNSIADMRSLEYVKQLHGMIWKSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTW 428
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ + +W+ L+ Y+Q + +A+ +F +M G P++VTFS VL + A + G+
Sbjct: 429 EESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQ 488
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+HSL K GF+ V + ++D Y+KC + +++K F+ + + DV+SW A+I+G+
Sbjct: 489 QVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHG 548
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIG 417
+A+EL + M PN T+ +L S ++ G + H + G +
Sbjct: 549 MAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHY 608
Query: 418 SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+ +VD+ + GRL +A K + + W+T+L HG
Sbjct: 609 ACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHG 651
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 137/284 (48%), Gaps = 4/284 (1%)
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF--SSFTFVANTVLDFYSKCELLEESLK 334
SE + ++ AD + + +H +IK S T + N ++ YSKC + +
Sbjct: 60 SETSLIELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQ 119
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
FDE+ + V SW L+ G + Y + I+ ++L P+ Y S + + +
Sbjct: 120 VFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDS 179
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
I G+ H ++ GF S + ++L+ MYAK GR+ D+ KVF+ L ++N VSWN M+ G
Sbjct: 180 IVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISG 239
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
+ +GL EA + M +I+PN FI V A +G VE+G Y N + + G+
Sbjct: 240 FVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKG-RYINRIAFEIGMQS 298
Query: 515 RMDHIASVVHLFA-CRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ +++ +FA C T F+ + + W ++SG
Sbjct: 299 NIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISG 342
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/671 (31%), Positives = 354/671 (52%), Gaps = 16/671 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG + N LL +Y + A LF+ M ER+++SW+A I+ +Q G ++A
Sbjct: 154 IVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMA 212
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ M + P T V +S CA R + IH + SGLE VS L +
Sbjct: 213 LELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASA 269
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G L A+ VFD + ER+ +SW ++L +Y Q G +F G+ S+ +
Sbjct: 270 YARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTL 329
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ C+ +L+ G IH+ + L+ D + L+++Y +C + A +F I
Sbjct: 330 VNASTGCS---SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP- 385
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA----DVKETIG 296
+ +W+ +I G +Q G+ A++LF +M G+ P T+ +L A A + +
Sbjct: 386 GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAE 445
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE---MDEHDVVSWNALIAG 353
GR+LHS I+ G++S + V+ Y+ C ++E+ +F D HDVVSWNA+I+
Sbjct: 446 GRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISS 505
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
H A+ + M G PN T +L+ + A+ G H + G +SN
Sbjct: 506 LSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESN 565
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
V + +AL MY +CG L AR++F+ ++ +++V +N M+ Y+Q+GL EAL+++ MQ
Sbjct: 566 VFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQ 625
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+ +P++ +F+ VLSAC H GL +EGW F SM + +GI+P DH A V + G
Sbjct: 626 QEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWL 685
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
A E I+ ++P +VW+ LL C+ ++D+ GR A + DP D SA+++LSN+
Sbjct: 686 ADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNIL 745
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
A A WDE A+VR M+ + L+K G SW E+++++H F + + +++ + +L
Sbjct: 746 AGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLH 805
Query: 653 VHLFDGGYVPD 663
+ + GYVPD
Sbjct: 806 AEIREIGYVPD 816
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 162/551 (29%), Positives = 278/551 (50%), Gaps = 16/551 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
NHLL +Y+K + D +++F + R+ SW+ +I+ +++ G + A+ F M +
Sbjct: 66 NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVR 125
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
+ T++ + ACA GD G+ IH + SGLE S ++N L+++YG CG ++SA +
Sbjct: 126 CDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLL 185
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ +ER+ +SW + +++ Q G+ L++F + GV + + L CA +
Sbjct: 186 FE-RMERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCA---KI 241
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+ IHS+V + LE V+ L + YA+ LD A VF D+ +W+A++G Y
Sbjct: 242 RQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAY 301
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
AQ G EA LF +M G+ PS+VT + A GR +H+ ++ G
Sbjct: 302 AQHGHMSEAALLFARMLHEGIPPSKVTL---VNASTGCSSLRFGRMIHACALEKGLDRDI 358
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ N +LD Y++C EE+ F+ + + VSWN +IAG A+EL + M E
Sbjct: 359 VLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLE 417
Query: 374 GHCPNLYTYSNILNISSDIP----AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
G P TY N+L + P A+ G++ H IV G+ S IG+A+V MYA CG
Sbjct: 418 GMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGA 477
Query: 430 LNDARKVFDHLSSK---NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
+++A F + + ++VSWN ++ +QHG G+ AL + M + + PN T + V
Sbjct: 478 IDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAV 537
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L AC + EG + +R G+ + ++ ++ G A E + +E
Sbjct: 538 LDACAGAAALTEGV-IVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVER 596
Query: 547 NKVVWRCLLSG 557
+ V++ +++
Sbjct: 597 DVVIFNAMIAA 607
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 214/403 (53%), Gaps = 13/403 (3%)
Query: 90 GDAR---SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV 146
GD R G+ IH R+ GLE + N L+ +Y KC L + VF R+ SW
Sbjct: 40 GDDRLLSQGRRIHARIVSLGLE--EELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWT 97
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+++++Y + G+ + +F ++ GV + +VL ACA LG+L G IH+ + +
Sbjct: 98 TIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVES 157
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
LE +A L+++Y C + A +F ++ DL +W+A I AQ G A++LF
Sbjct: 158 GLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELF 216
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
+M G+ P+ +T L A +++ R +HS++ + G V+ + Y++
Sbjct: 217 QRMQLEGVRPARITLVITLSVCAKIRQA---RAIHSIVRESGLEQTLVVSTALASAYARL 273
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
L+++ + FD E DVVSWNA++ + H EA L ML EG P+ T ++
Sbjct: 274 GHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVT---LV 330
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
N S+ ++ +G+ H C ++ G D ++V+G+AL+DMY +CG +AR +F+ + N V
Sbjct: 331 NASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAV 389
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
SWNTM+ G +Q G + ALE++ MQ + P T++ +L A
Sbjct: 390 SWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA 432
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 226/510 (44%), Gaps = 71/510 (13%)
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L G +IH+ + LE + + L+ LY KCE L VFS +++ D +W+ +I
Sbjct: 45 LSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y + G+A AI +F +M G+ VTF VL A A + + GR +H+ I++ G
Sbjct: 103 YTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGK 162
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+ +AN +L Y C + ++ F+ M E D+VSWNA IA + S A+EL + M
Sbjct: 163 SVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQL 221
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EG P T L++ + I + H + + G + +V+ +AL YA+ G L+
Sbjct: 222 EGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQ 278
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC-- 490
A++VFD + +++VSWN ML YAQHG EA +++ M I P+ T + + C
Sbjct: 279 AKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSS 338
Query: 491 ------VHIGLVEEGWHY---FNSMIRDHGISPRMDHIASVVHLF--------------- 526
+H +E+G + + D + R HLF
Sbjct: 339 LRFGRMIHACALEKGLDRDIVLGNALLD--MYTRCGSPEEARHLFEGIPGNAVSWNTMIA 396
Query: 527 --ACRGQTRRAYEFIKSSPIE---PNKVVW--------------RCLLSGCKTHKDLVLG 567
+ +GQ +RA E + +E P + + R + G K H +V
Sbjct: 397 GSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSC 456
Query: 568 RYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV--RKIMKEKSLKKDTGCSWTELQ 625
YA+E + T + +YA DE A R M++ + D SW +
Sbjct: 457 GYASEPAIGT---------AVVKMYASCGAIDEAAASFQRGAMED---RHDV-VSWNAII 503
Query: 626 NKM--HYFSTSRFAQFQGIDLHEVM-NQLS 652
+ + H F+ +DLH V NQ++
Sbjct: 504 SSLSQHGHGKRALGFFRRMDLHGVAPNQIT 533
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/691 (32%), Positives = 368/691 (53%), Gaps = 34/691 (4%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF P V N LL Y + + A LF+ MP R+ +++++LI+ AL+
Sbjct: 93 GFTPAVA--NALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDAL 150
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRG-DARSGKEIHGRMYRSG-LELNSHVS-NCLINMY 121
R M+ + +T V + AC+ D R G+E H ++G L+ + + N L++MY
Sbjct: 151 RDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMY 210
Query: 122 GKCGLLSSAQFVFDASLERNS-----ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+ GL+ AQ +F + +S ++W +++S Q G +++ GV
Sbjct: 211 ARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPD 270
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ AS L AC+ L L +G ++H+ V K + L + FVA L+++YA E++ +A RVF
Sbjct: 271 GITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVF 330
Query: 236 SNIQ--LPDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVK 292
+ L W+A++ GYAQ G EA++LF +M + +G++PSE T + VL A A +
Sbjct: 331 DMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSE 390
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
G +H ++K G + FV N ++D Y++ +E + F ++ DVVSWN LI
Sbjct: 391 TFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLIT 450
Query: 353 GHLASCHYGEAIELLKDMLFEGH------------------CPNLYTYSNILNISSDIPA 394
G + H +A +L+++M +G PN T +L + + A
Sbjct: 451 GCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAA 510
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
GK+ H ++ DS++ +GSALVDMYAKCG L +R VFD L +N+++WN +++
Sbjct: 511 PAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMA 570
Query: 455 YAQHGLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
Y HGLG EA+ ++ M+ N+ KPN+ TFI L+AC H G+V+ G F+SM R+HG+
Sbjct: 571 YGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQ 630
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKS-SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
P D A V + G+ AY I S P E W L C+ H+++ LG AAE
Sbjct: 631 PTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAE 690
Query: 573 KILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
++ +P++ S +++L N+Y+ A +W+++++VR M+++ + K+ GCSW EL +H F
Sbjct: 691 RLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFM 750
Query: 633 TSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
A + +H M+ L + + GY PD
Sbjct: 751 AGESAHPESTLVHAHMDALWERMRNQGYTPD 781
>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 713
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/666 (33%), Positives = 356/666 (53%), Gaps = 23/666 (3%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ---IGMPEVALNYFRLMVCC 70
N L+ Y K ++ A +F+ + ++V+SW++LI+G+SQ I + FR M
Sbjct: 55 NVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQ 114
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL--LS 128
+ PN YT G A +S G++ H + + + +V L+ MY K GL L
Sbjct: 115 DILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLKYLY 174
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+ F +++ + L SS C L K + S++ +VL + A
Sbjct: 175 MVYYGFWLCYKKDVLR-RQLKSSIC------------FLEEKEKESDSDYVFTAVLSSLA 221
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAM--GLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
+ +G QIH + K L FVA+ L+ +Y+KCE L+ A ++F + + W
Sbjct: 222 ATVYVGLGRQIHGITVKNGLL--GFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITW 279
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
SA++ GY+Q G++ EAI LF +MFS+G+ PSE T VL A +D+ + G+QLHS ++K
Sbjct: 280 SAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLK 339
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
+GF F ++D Y+K L ++ K FD + E DV W +LI+G++ + EA+ L
Sbjct: 340 LGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALIL 399
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+ M G PN T +++L S + +E GKQ H +K GF V IGSAL MY K
Sbjct: 400 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTK 459
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG L D VF +K++VSWN M+ G + +G G EALE++ M +P+D TF+ +
Sbjct: 460 CGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNI 519
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
+SAC H G VE GW YF+ M G+ P++DH A +V + + GQ + EFI+S+ I+
Sbjct: 520 ISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKEFIESASIDH 579
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+WR LLS CK H + LG YA EK++S ++S ++ L+ +Y + +V K
Sbjct: 580 GLCLWRILLSACKNHGNCELGVYAGEKLMSLGSRESSTYVQLAGIYTALGRMRDVERVWK 639
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIY 666
+M+ + K+ GCSW L+N+ H F + + ++++ +S + + G+V +
Sbjct: 640 LMRTNGVSKEVGCSWIALKNQWHVFVVGDTMHPRIEETKDLVSLVSRQMLEEGFVT-VLN 698
Query: 667 SSHFEE 672
SS+ EE
Sbjct: 699 SSYVEE 704
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 155/286 (54%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G V N L+ MY K +N+A K+FD +RN I+WSA+++G+SQ G A+
Sbjct: 237 VKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAI 296
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M ++P+ YT VG ++AC+ GK++H + + G E + + L++MY
Sbjct: 297 KLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMY 356
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G L+ A+ FD ER+ W SL+S Y Q ++ L ++ + +G+ ++ + A
Sbjct: 357 AKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMA 416
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SVL AC+ L L++G Q+H K + + L +Y KC L+ + VF
Sbjct: 417 SVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNK 476
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
D+ +W+A+I G + G+ EA++LF +M + G P +VTF ++ A
Sbjct: 477 DVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISA 522
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 192/412 (46%), Gaps = 53/412 (12%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
NL G +H+ + + A L+N YAKC +L A +F+ I D+ +W++LI
Sbjct: 31 NLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLIT 90
Query: 252 GYAQLGKACEA---IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
GY+Q G + + LF +M + ++P+ T + + A + ++ GRQ H+L++KM
Sbjct: 91 GYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMS 150
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
+V +++ Y K L +L +YG + K
Sbjct: 151 SFGDIYVDTSLVGMYCKAGL------------------------KYLYMVYYGFWLCYKK 186
Query: 369 DMLF-------------EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
D+L E + Y ++ +L+ + + G+Q H VK G V
Sbjct: 187 DVLRRQLKSSICFLEEKEKESDSDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVA 246
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ +ALV MY+KC LN+A K+FD +N ++W+ M+ GY+Q+G EA++++S M
Sbjct: 247 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAG 306
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA---CRGQT 532
IKP++ T +GVL+AC I + EG +S + G + ++V ++A C
Sbjct: 307 IKPSEYTIVGVLNACSDICYLVEG-KQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 365
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD-----LVLGRYAAEKILSTDP 579
R+ ++ ++ E + +W L+SG + D ++ R I+ DP
Sbjct: 366 RKGFDCLQ----ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDP 413
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 94/192 (48%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF ++ L+ MY K + DA+K FD + ER+V W++LISG+ Q E AL +
Sbjct: 341 GFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILY 400
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R M + PN T + AC+S GK++HG + G L + + L MY KC
Sbjct: 401 RRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKC 460
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L VF + ++ +SW +++S G+ L++F G + + +++
Sbjct: 461 GSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNII 520
Query: 185 GACAVLGNLKVG 196
AC+ G ++ G
Sbjct: 521 SACSHKGFVERG 532
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 7/142 (4%)
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
+ + GR +H+ II+ G S+ T AN +++FY+KC L ++ F+ + DVVSWN+LI
Sbjct: 30 RNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLI 89
Query: 352 AGH-----LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
G+ ++S H ++L ++M + PN YT + I S + + G+Q H +V
Sbjct: 90 TGYSQNGGISSSH--TVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVV 147
Query: 407 KPGFDSNVVIGSALVDMYAKCG 428
K ++ + ++LV MY K G
Sbjct: 148 KMSSFGDIYVDTSLVGMYCKAG 169
>gi|357114780|ref|XP_003559172.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 846
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/672 (31%), Positives = 356/672 (52%), Gaps = 17/672 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQI------ 54
M+ +G+ P + N+LL +Y + + A+ LFD MP R+ ++W+ LI+G+S
Sbjct: 78 MLRAGYRPGLFLRNNLLAVYCRCGDMRHARLLFDGMPRRDAVTWNTLIAGYSSSSGGGGS 137
Query: 55 ----GMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELN 110
+AL FR + + +TY ++AC GD R G+ HG + SGL
Sbjct: 138 TGGGATTRLALAAFRDARRDGVAVDRFTYAAVLAACGGAGDGRHGRAAHGMVVASGLAET 197
Query: 111 SHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK 170
+ ++N +I+MY KCG++ + VFD + ER+ SW LLS+Y + G + + + +
Sbjct: 198 AFLTNSVIDMYAKCGMIDEVRLVFDRAEERDEASWNLLLSAYVRMGWPEVAVHVLVWMHR 257
Query: 171 SGVAISEFSCASVLGACAVL-GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
SGV + F+ +L AC+ L G+ V +H V K L+ D FV ++++YAK L+
Sbjct: 258 SGVKLDSFALGGILKACSELEGSEDVRRMLHGCVVKVGLDLDMFVGSAMVDMYAKNGGLE 317
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGK------ACEAIDLFVKMFSSGLMPSEVTFSY 283
A +VF I ++ +SA+I G+A+LG EAI LF + + PS TF
Sbjct: 318 EAIKVFDCIPNQNVVVYSAMIAGFARLGNDPCPEIRIEAIRLFSNLLRMRIKPSRFTFKS 377
Query: 284 VLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHD 343
VL GRQ+H+ +I GF F+AN +++ YSK + +SL+ F + D
Sbjct: 378 VLEVCNLTNALHCGRQIHAHVIFNGFQEDEFIANVLINLYSKARSVNDSLRCFHMTPKQD 437
Query: 344 VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHC 403
V +W ++I + ++ ++++L ++L G+ P+ +T SN++N + + KQ HC
Sbjct: 438 VFTWTSMITAFADNENFEKSLDLFIELLNVGNEPDQFTLSNVMNACAALSIPVTCKQIHC 497
Query: 404 CIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGRE 463
VK G D V G++ + MY G L ++K F+ ++ + +SW+TM++ YA HG E
Sbjct: 498 YTVKSGLDQFTVCGNSQIAMYRSMGDLKASKKTFEQITCLDTLSWSTMVLSYAVHGHENE 557
Query: 464 ALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV 523
AL + M++ ++ ND F+ VL AC +GL +EG+ +++SM +HG +P H ASVV
Sbjct: 558 ALLLLQKMKDCRVGINDIAFLAVLIACSQLGLADEGFRHYDSMKSEHGCAPNSKHKASVV 617
Query: 524 HLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTS 583
L G+ A +FI S E + ++W LL C+ H D G EK++ +P
Sbjct: 618 DLLCRVGKIAEAEDFILRSGSENDPILWHALLRACRIHGDKERGIKTGEKLMELEPFAAR 677
Query: 584 AHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGID 643
++++L N+Y +A + R +M+E+ + K+TG SW E +H F+ + Q
Sbjct: 678 SYVVLYNLYMDAGKISLAMRTRGLMRERGMSKETGISWAEFGGSIHCFADGDNSCLQNTA 737
Query: 644 LHEVMNQLSVHL 655
+H + +L + +
Sbjct: 738 VHTRLEELLIRV 749
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 209/418 (50%), Gaps = 17/418 (4%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
GK H M R+G + N L+ +Y +CG + A+ +FD R++++W +L++ Y
Sbjct: 71 GKLTHSHMLRAGYRPGLFLRNNLLAVYCRCGDMRHARLLFDGMPRRDAVTWNTLIAGYSS 130
Query: 155 CGEHVH----------GLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF 204
L F +R+ GVA+ F+ A+VL AC G+ + G H +V
Sbjct: 131 SSGGGGSTGGGATTRLALAAFRDARRDGVAVDRFTYAAVLAACGGAGDGRHGRAAHGMVV 190
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
L F+ +I++YAKC +D VF + D +W+ L+ Y ++G A+
Sbjct: 191 ASGLAETAFLTNSVIDMYAKCGMIDEVRLVFDRAEERDEASWNLLLSAYVRMGWPEVAVH 250
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-LHSLIIKMGFSSFTFVANTVLDFY 323
+ V M SG+ +L A ++++ + R+ LH ++K+G FV + ++D Y
Sbjct: 251 VLVWMHRSGVKLDSFALGGILKACSELEGSEDVRRMLHGCVVKVGLDLDMFVGSAMVDMY 310
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG------EAIELLKDMLFEGHCP 377
+K LEE++K FD + +VV ++A+IAG + EAI L ++L P
Sbjct: 311 AKNGGLEEAIKVFDCIPNQNVVVYSAMIAGFARLGNDPCPEIRIEAIRLFSNLLRMRIKP 370
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ +T+ ++L + + A+ G+Q H ++ GF + I + L+++Y+K +ND+ + F
Sbjct: 371 SRFTFKSVLEVCNLTNALHCGRQIHAHVIFNGFQEDEFIANVLINLYSKARSVNDSLRCF 430
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+++ +W +M+ +A + ++L+++ + +P+ T V++AC + +
Sbjct: 431 HMTPKQDVFTWTSMITAFADNENFEKSLDLFIELLNVGNEPDQFTLSNVMNACAALSI 488
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 11/271 (4%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+ HS +++ G+ F+ N +L Y +C + + FD M D V+WN LIAG+ +
Sbjct: 71 GKLTHSHMLRAGYRPGLFLRNNLLAVYCRCGDMRHARLLFDGMPRRDAVTWNTLIAGYSS 130
Query: 357 SCHYGE----------AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
S G A+ +D +G + +TY+ +L G+ H +V
Sbjct: 131 SSGGGGSTGGGATTRLALAAFRDARRDGVAVDRFTYAAVLAACGGAGDGRHGRAAHGMVV 190
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
G + ++++DMYAKCG +++ R VFD ++ SWN +L Y + G A+
Sbjct: 191 ASGLAETAFLTNSVIDMYAKCGMIDEVRLVFDRAEERDEASWNLLLSAYVRMGWPEVAVH 250
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
+ M + +K + G+L AC + E+ + + G+ M +++V ++
Sbjct: 251 VLVWMHRSGVKLDSFALGGILKACSELEGSEDVRRMLHGCVVKVGLDLDMFVGSAMVDMY 310
Query: 527 ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
A G A + P + N VV+ +++G
Sbjct: 311 AKNGGLEEAIKVFDCIPNQ-NVVVYSAMIAG 340
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/651 (31%), Positives = 348/651 (53%), Gaps = 1/651 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM- 67
N++ N L VK ++ A+ +FD+M R+ ISW+ LI+G+ AL F M
Sbjct: 56 NMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMW 115
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
V + + + A+ ACA + G+ +HG +SGL + VS+ LI+MY K G +
Sbjct: 116 VHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKI 175
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
VF+ + RN +SW ++++ G ++ GL F +S V + A L A
Sbjct: 176 EQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKAS 235
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A L G IH+ K + FV L +Y KC K D R+F +++PD+ +W+
Sbjct: 236 ADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWT 295
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
LI Y Q+G+ A++ F +M S + P++ TF+ V+ + A++ G Q+H ++++
Sbjct: 296 TLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRL 355
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
G + VAN+++ YSKC LL+ + F + D++SW+ +I+ + + EA + L
Sbjct: 356 GLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYL 415
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M EG PN + S++L++ + +E GKQ H ++ G D ++ SA++ MY+KC
Sbjct: 416 SWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKC 475
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G + +A K+F+ + +++SW M+ GYA+HG +EA+ ++ + +KP+ FIGVL
Sbjct: 476 GSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVL 535
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
+AC H G+V+ G++YF M + ISP +H ++ L G+ A I+S P +
Sbjct: 536 TACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTD 595
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
VVW LL C+ H D+ GR+ AE++L DP HI L+N+YA W E A +RK+
Sbjct: 596 DVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKL 655
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
MK K + K+ G SW + ++++ F A Q + V+ LS ++ D
Sbjct: 656 MKSKGVIKERGWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLLSANIGDA 706
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 166/588 (28%), Positives = 276/588 (46%), Gaps = 44/588 (7%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG +V + L+ MY+K +I ++F++M RNV+SW+A+I+G G L
Sbjct: 151 VKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGL 210
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
YF M + + +T+ A+ A A GK IH + + G + +S V N L MY
Sbjct: 211 LYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMY 270
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG +F+ + +SW +L+S+Y Q GE H ++ F RKS V+ ++++ A
Sbjct: 271 NKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFA 330
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+V+ +CA L K G QIH V + L VA +I LY+KC L AS VF I
Sbjct: 331 AVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRK 390
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +WS +I Y+Q G A EA D M G P+E S VL + G+Q+H
Sbjct: 391 DIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVH 450
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ ++ +G V + ++ YSKC ++E+ K F+ M +D++SW A+I G+ +
Sbjct: 451 AHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQ 510
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVVI 416
EAI L + + G P+ + +L + ++ G T+ + P +
Sbjct: 511 EAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHY--- 567
Query: 417 GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQ 472
L+D+ + GRL++A + + + V W+T+L HG GR E Q
Sbjct: 568 -GCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAE-----Q 621
Query: 473 ENKIKPNDN----TFIGVLSA------CVHI-------GLVEE-GWHY------FNSMIR 508
++ PN T + +A HI G+++E GW + N+ +
Sbjct: 622 LLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVA 681
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
P+ +HI +V+ L + A + I+S + + + C+LS
Sbjct: 682 GDQAHPQSEHITTVLKLLS--ANIGDAQQEIRSLHEDVEDLAYSCILS 727
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/640 (32%), Positives = 350/640 (54%), Gaps = 5/640 (0%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A+++FD +P + +++ALI +S G A++ +R M+ + PN YT+ + AC++
Sbjct: 52 ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSA 111
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
D +G+ IH GL + VS LI++Y +C A VF R+ ++W ++
Sbjct: 112 LADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAM 171
Query: 149 LSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
L+ Y G + H + L + + G+ + + S+L A G L G +H+ +
Sbjct: 172 LAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAY 231
Query: 208 LEFDK---FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
L+ ++ + L+++YAKC+ L A RVF + + + WSALIGG+ + EA +
Sbjct: 232 LDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFN 291
Query: 265 LFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
LF M G+ S + + L A + + G QLH+L+ K G + N++L Y
Sbjct: 292 LFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMY 351
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+K L+ E+ FDE+ D +S+ AL++G++ + EA + K M P++ T
Sbjct: 352 AKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMV 411
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+++ S + A++ G+ +H ++ G I ++L+DMYAKCGR++ +R+VFD + ++
Sbjct: 412 SLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPAR 471
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
++VSWNTM+ GY HGLG+EA ++ M+ +P+D TFI +++AC H GLV EG H+F
Sbjct: 472 DIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWF 531
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
++M +GI PRM+H +V L A G AY+FI+S P++ + VW LL C+ HK+
Sbjct: 532 DTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKN 591
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
+ LG+ + I PE T ++LSN+++ A +DE A+VR I K K KK GCSW E
Sbjct: 592 IDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIE 651
Query: 624 LQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ +H F + D++ ++ + + + GY D
Sbjct: 652 INGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQAD 691
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 223/459 (48%), Gaps = 15/459 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G H ++ L+ +Y++ +R A +F +MP R+V++W+A+++G++ GM A+ +
Sbjct: 129 GLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 188
Query: 65 RLMV-CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH---VSNCLINM 120
M L PN T V + A G G +H R+ L+ N + L++M
Sbjct: 189 LDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDM 248
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA-ISEFS 179
Y KC L A VF RN ++W +L+ + C +F G+ +S S
Sbjct: 249 YAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATS 308
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
AS L CA L +L++G Q+H+L+ K + D L+++YAK ++ A+ +F I
Sbjct: 309 VASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIA 368
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ D ++ AL+ GY Q GKA EA +F KM + + P T ++ A + + GR
Sbjct: 369 IKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRC 428
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H +I G + T + N+++D Y+KC ++ S + FD+M D+VSWN +IAG+
Sbjct: 429 SHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGL 488
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSNV 414
EA L M +G P+ T+ ++ S + GK TH + P + +
Sbjct: 489 GKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI 548
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTML 452
+VD+ A+ G L++A + + K ++ W +L
Sbjct: 549 ----CMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALL 583
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 241/509 (47%), Gaps = 29/509 (5%)
Query: 108 ELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLL 167
EL H++ G L+ A+ VFD ++ ++ +L+ +Y G + ++
Sbjct: 39 ELEQHIAR---------GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRS 89
Query: 168 SRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK 227
V ++++ VL AC+ L +L G IH+ L D FV+ LI+LY +C +
Sbjct: 90 MLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCAR 149
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLG 286
A+ VF+ + + D+ AW+A++ GYA G AI + M GL P+ T +L
Sbjct: 150 FGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLP 209
Query: 287 AFADVKETIGGRQLHSLIIKMGFSS---FTFVANTVLDFYSKCELLEESLKTFDEMDEHD 343
A G +H+ ++ + +LD Y+KC+ L + + F M +
Sbjct: 210 LLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRN 269
Query: 344 VVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTH 402
V+W+ALI G + EA L KDML EG C + + ++ L + + + + G Q H
Sbjct: 270 EVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLH 329
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
+ K G +++ G++L+ MYAK G +N+A +FD ++ K+ +S+ +L GY Q+G
Sbjct: 330 ALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAE 389
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
EA ++ MQ ++P+ T + ++ AC H+ ++ G S+I G++ S+
Sbjct: 390 EAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVI-IRGLALETSICNSL 448
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILST----- 577
+ ++A G+ + + P + V W +++G H LG+ A LS
Sbjct: 449 IDMYAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAGYGIHG---LGKEATTLFLSMKNQGF 504
Query: 578 DPEDTSAHIML-----SNVYAEANMWDET 601
+P+D + ++ S + E W +T
Sbjct: 505 EPDDVTFICLIAACSHSGLVTEGKHWFDT 533
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 6/256 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ SG H ++ N LL MY K IN+A LFDE+ ++ IS+ AL+SG+ Q G E A
Sbjct: 332 LAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEA 391
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F+ M C ++P+ T V + AC+ + G+ HG + GL L + + N LI+M
Sbjct: 392 FLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDM 451
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + ++ VFD R+ +SW ++++ Y G +FL + G + +
Sbjct: 452 YAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTF 511
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCAL--EFDKFVAMGLINLYAKCEKLDLASRVFSN 237
++ AC+ G + G ++ K + + ++ M ++L A+ LD A + +
Sbjct: 512 ICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICM--VDLLARGGFLDEAYQFIQS 569
Query: 238 IQL-PDLTAWSALIGG 252
+ L D+ W AL+G
Sbjct: 570 MPLKADVRVWGALLGA 585
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/655 (30%), Positives = 345/655 (52%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V L+ Y K + DA+K+FD MP R+V +W+++IS +S A F+ M
Sbjct: 194 DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 253
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ T++ + AC + + GK + + + EL+ V LI MY +C
Sbjct: 254 QEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPE 313
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A VF + N I+W ++++++ G L+ F + ++ G+ + + S+L
Sbjct: 314 DAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFT 373
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L+ +IH L+ + L+ + L+N+Y +CE D A VF ++LP+L +W++
Sbjct: 374 TPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNS 433
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+IG Y Q + +A+ LF M G+ P V F +LGA + +H + + G
Sbjct: 434 MIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESG 493
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
V ++++ Y+K L+ + EMDE + +WN LI G+ EA+E +
Sbjct: 494 LGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQ 553
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+ E + T+ ++LN + ++ GK H V+ G DS+V++ +AL +MY+KCG
Sbjct: 554 KLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCG 613
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ +AR++FD + ++ VSWN ML YAQHG E L++ M++ +K N TF+ VLS
Sbjct: 614 SMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLS 673
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
+C H GL+ EG YF+S+ D GI + +H +V L G+ + A ++I P+EP
Sbjct: 674 SCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGI 733
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
V W LL C+ KDL G+ AA K+L DP ++SA ++LSN+Y+E W AK+R+ M
Sbjct: 734 VTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAM 793
Query: 609 KEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ +KK G S +++NK+H F + + ++++ + +L + + GYVPD
Sbjct: 794 ASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPD 848
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/567 (28%), Positives = 280/567 (49%), Gaps = 11/567 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP-EVA 60
+ GF N + LL MY K + DAQ +F+EM E+NV++W+A++ +S G ++A
Sbjct: 85 LERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLA 144
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M+ ++ N T++ +++ R GK IH + S L+ V+ L+N
Sbjct: 145 VELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNT 204
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L+ A+ VFD R+ +W S++S+Y IF ++ G +
Sbjct: 205 YTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTF 264
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L AC L+ G + + + + E D FV LI +YA+C + A++VF ++
Sbjct: 265 LSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQ 324
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L WSA+I +A G EA+ F M G++P+ VTF +L F ++
Sbjct: 325 TNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRI 384
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H LI + G T + N +++ Y +CE +++ FD+++ +++SWN++I ++ +
Sbjct: 385 HLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERH 444
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A++L + M +G P+ + IL + K H C+ + G + ++ ++L
Sbjct: 445 DDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSL 504
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V+MYAK G L+ A + + + + +WN ++ GYA HG REALE Y +Q I +
Sbjct: 505 VNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDK 564
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA----SVVHLFACRGQTRRAY 536
TFI VL+AC + EG MI + + +D ++ ++++ G A
Sbjct: 565 VTFISVLNACTSSTSLAEG-----KMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENAR 619
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKD 563
S PI + V W +L H +
Sbjct: 620 RIFDSMPIR-SAVSWNGMLQAYAQHGE 645
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 161/545 (29%), Positives = 264/545 (48%), Gaps = 5/545 (0%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY + + DA F ++ RNV+SW+ +IS +S + AL F M+ + PN T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
V +++C S + R G +H G N+ V+ L+NMYGKCG L AQ VF+
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK--SGVAISEFSCASVLGACAVLGNLKVG 196
E+N ++W ++L Y G L + L +R GV + + +VL + L+ G
Sbjct: 121 EKNVVTWNAMLGVYSLQG-CCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG 179
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
IHS V + D FV L+N Y KC L A +VF + + W+++I Y+
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSIS 239
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
++ EA +F +M G VTF +L A + + G+ + I + F FV
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVG 299
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
++ Y++C E++ + F M + ++++W+A+I H GEA+ + M EG
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGIL 359
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
PN T+ ++LN + +E + H I + G D + +ALV++Y +C +DAR V
Sbjct: 360 PNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTV 419
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
FD L NL+SWN+M+ Y Q +AL+++ MQ+ I+P+ F+ +L AC IG
Sbjct: 420 FDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT-IGSH 478
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+ + + G+ S+V+++A G+ A E I E W L++
Sbjct: 479 GRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVA-EVILQEMDEQQITAWNVLIN 537
Query: 557 GCKTH 561
G H
Sbjct: 538 GYALH 542
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 232/488 (47%), Gaps = 6/488 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+ F ++ L+ MY + DA ++F M + N+I+WSA+I+ F+ G AL Y
Sbjct: 290 TSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRY 349
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
FR+M + PN T++ ++ + IH + GL+ + + N L+N+YG+
Sbjct: 350 FRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGR 409
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
C A+ VFD N ISW S++ Y QC H L++F ++ G+ + ++
Sbjct: 410 CESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTI 469
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
LGAC + + + +H V + L V L+N+YAK +LD+A + + +
Sbjct: 470 LGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQI 529
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
TAW+ LI GYA G++ EA++ + K+ + +VTF VL A G+ +HS
Sbjct: 530 TAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSN 589
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
++ G S V N + + YSKC +E + + FD M VSWN ++ + E
Sbjct: 590 AVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEV 649
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALVD 422
++L++ M EG N T+ ++L+ S I G Q H G + LVD
Sbjct: 650 LKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVD 709
Query: 423 MYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVG-YAQHGLGREALEIYSMMQENKIKPND 480
+ + G+L +A K + +V+W ++L Q L R L +++ + P +
Sbjct: 710 LLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLE---LDPGN 766
Query: 481 NTFIGVLS 488
++ VLS
Sbjct: 767 SSASVVLS 774
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G +VI N L MY K + +A+++FD MP R+ +SW+ ++ ++Q G E L
Sbjct: 591 VECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVL 650
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG-KEIHGRMYRSGLELNSHVSNCLINM 120
R M ++ N T+V +S+C+ G G + H + G+E+ + CL+++
Sbjct: 651 KLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDL 710
Query: 121 YGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
G+ G L A+ ++ LE ++W SLL +
Sbjct: 711 LGRAGKLQEAEKYISKMPLEPGIVTWASLLGA 742
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/671 (31%), Positives = 358/671 (53%), Gaps = 16/671 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG + N LL +Y + A LF++M ER+++SW+A I+ +Q G +A
Sbjct: 154 IVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIA 212
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ M + P T V A++ CA+ R + IH + SGLE VS L +
Sbjct: 213 LELFQRMQLEGVRPARITLVIALTVCAT---IRQAQAIHFIVRESGLEQTLVVSTALASA 269
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G L A+ VFD + ER+ +SW ++L +Y Q G +F G++ S+ +
Sbjct: 270 YARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTL 329
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ C+ +L+ G IH + L+ D + L+++Y +C + A +F I
Sbjct: 330 VNASTGCS---SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC 386
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA----DVKETIG 296
+ +W+ +I G +Q G+ A++LF +M G+ P T+ +L A A + +
Sbjct: 387 -NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAE 445
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE---MDEHDVVSWNALIAG 353
GR+LHS I+ G++S + V+ Y+ C ++E+ +F D HDVVSWNA+I+
Sbjct: 446 GRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISS 505
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
H A+ + M G PN T +L+ + A+ G+ H + G +SN
Sbjct: 506 LSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESN 565
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+ + +AL MY +CG L AR++F+ ++ +++V +N M+ Y+Q+GL EAL+++ MQ
Sbjct: 566 LFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQ 625
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+ +P++ +F+ VLSAC H GL +EGW F SM + +GI+P DH A V + G
Sbjct: 626 QEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWL 685
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
A E I+ ++P +VW+ LL C+ ++D+ GR A + DP D SA+++LSN+
Sbjct: 686 ADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNIL 745
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
A A WDE A+VR M+ + L+K+ G SW E+++++H F + + +++ + +L
Sbjct: 746 AGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLH 805
Query: 653 VHLFDGGYVPD 663
+ + GYVPD
Sbjct: 806 AEIREIGYVPD 816
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 159/551 (28%), Positives = 274/551 (49%), Gaps = 16/551 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
NHLL +Y+K + D +++F + R+ SW+ +I+ +++ G + A+ F M +
Sbjct: 66 NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVR 125
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
+ T++ + ACA GD G+ IH + SGL+ S ++N L+++YG CG ++SA +
Sbjct: 126 CDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLL 185
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ +ER+ +SW + +++ Q G+ L++F + GV + + L CA +
Sbjct: 186 FE-KMERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCA---TI 241
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+ IH +V + LE V+ L + YA+ L A VF D+ +W+A++G Y
Sbjct: 242 RQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAY 301
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
AQ G EA LF +M G+ PS+VT + A GR +H ++ G
Sbjct: 302 AQHGHMSEAALLFARMLHEGISPSKVTL---VNASTGCSSLRFGRMIHGCALEKGLDRDI 358
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ N +LD Y++C EE+ F + + VSWN +IAG A+EL + M E
Sbjct: 359 VLGNALLDMYTRCGSPEEARHLFKRIP-CNAVSWNTMIAGSSQKGQMKRAVELFQRMQLE 417
Query: 374 GHCPNLYTYSNILNISSDIP----AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
G P TY N+L + P A+ G++ H IV G+ S IG+A+V MYA CG
Sbjct: 418 GMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGA 477
Query: 430 LNDARKVFDHLSSK---NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
+++A F + + ++VSWN ++ +QHG G+ AL + M + + PN T + V
Sbjct: 478 IDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAV 537
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L AC + EG + +R G+ + ++ ++ G A E + +E
Sbjct: 538 LDACAGAAALTEG-EIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVER 596
Query: 547 NKVVWRCLLSG 557
+ V++ +++
Sbjct: 597 DVVIFNAMIAA 607
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 211/403 (52%), Gaps = 13/403 (3%)
Query: 90 GDAR---SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV 146
GD R G+ IH R+ GLE + N L+ +Y KC L + VF R+ SW
Sbjct: 40 GDDRLLSQGRRIHARIVSLGLE--EELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWT 97
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+++++Y + G+ + +F ++ GV + +VL ACA LG+L G IH+ + +
Sbjct: 98 TIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVES 157
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
L+ +A L+++Y C + A +F ++ DL +W+A I AQ G A++LF
Sbjct: 158 GLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELF 216
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
+M G+ P+ +T L A +++ + +H ++ + G V+ + Y++
Sbjct: 217 QRMQLEGVRPARITLVIALTVCATIRQA---QAIHFIVRESGLEQTLVVSTALASAYARL 273
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
L ++ + FD E DVVSWNA++ + H EA L ML EG P+ T ++
Sbjct: 274 GHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT---LV 330
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
N S+ ++ +G+ H C ++ G D ++V+G+AL+DMY +CG +AR +F + N V
Sbjct: 331 NASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC-NAV 389
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
SWNTM+ G +Q G + A+E++ MQ + P T++ +L A
Sbjct: 390 SWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEA 432
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 178/369 (48%), Gaps = 20/369 (5%)
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L G +IH+ + LE + + L+ LY KCE L VFS +++ D +W+ +I
Sbjct: 45 LSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y + G+A AI +F +M G+ VTF VL A A + + GR +H+ I++ G
Sbjct: 103 YTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGK 162
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+ +AN +L Y C + ++ F++M E D+VSWNA IA + S G A+EL + M
Sbjct: 163 SVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQL 221
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EG P T L + + I + H + + G + +V+ +AL YA+ G L
Sbjct: 222 EGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQ 278
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A++VFD + +++VSWN ML YAQHG EA +++ M I P+ T + + C
Sbjct: 279 AKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSS 338
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIA----SVVHLFACRGQTRRAYEFIKSSPIEPNK 548
+ F MI + +D +++ ++ G A K P N
Sbjct: 339 L--------RFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC--NA 388
Query: 549 VVWRCLLSG 557
V W +++G
Sbjct: 389 VSWNTMIAG 397
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/576 (33%), Positives = 324/576 (56%), Gaps = 3/576 (0%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
K+IH R+ GL+ + + LI+ G ++ A+ VFD W +++ Y +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
L ++ + + V+ F+ +L AC+ L +L++G +H+ VF+ + D FV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLT--AWSALIGGYAQLGKACEAIDLFVKMFSSG 273
GLI LYAKC +L A VF + LP+ T +W+A++ YAQ G+ EA+++F +M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ P V VL AF +++ GR +H+ ++KMG + ++ Y+KC + +
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
FD+M +++ WNA+I+G+ + + EAI++ +M+ + P+ + ++ ++ + +
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
++E + + + + + +V I SAL+DM+AKCG + AR VFD +++V W+ M+V
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
GY HG REA+ +Y M+ + PND TF+G+L AC H G+V EGW +FN M DH I+
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKIN 456
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEK 573
P+ H A V+ L G +AYE IK P++P VW LLS CK H+ + LG YAA++
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 574 ILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
+ S DP +T ++ LSN+YA A +WD A+VR MKEK L KD GCSW E++ ++ F
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576
Query: 634 SRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ + ++ + + L +GG+V + S H
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLH 612
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 222/439 (50%), Gaps = 3/439 (0%)
Query: 23 FSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGA 82
F I A+++FD++P + W+A+I G+S+ + AL + M + P+ +T+
Sbjct: 66 FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHL 125
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA--SLER 140
+ AC+ + G+ +H +++R G + + V N LI +Y KC L SA+ VF+ ER
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
+SW +++S+Y Q GE + L+IF RK V + SVL A L +LK G IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
+ V K LE + + + L +YAKC ++ A +F ++ P+L W+A+I GYA+ G A
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
EAID+F +M + + P ++ + + A A V R ++ + + + F+++ ++
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
D ++KC +E + FD + DVV W+A+I G+ EAI L + M G PN
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T+ +L + + G + + + ++D+ + G L+ A +V +
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Query: 441 SSKNLVS-WNTMLVGYAQH 458
+ V+ W +L +H
Sbjct: 486 PVQPGVTVWGALLSACKKH 504
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 183/376 (48%), Gaps = 29/376 (7%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFD--EMPERNVISWSALISGFSQIGMPEVALN 62
GF +V N L+ +Y K R+ A+ +F+ +PER ++SW+A++S ++Q G P AL
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F M ++P++ V ++A D + G+ IH + + GLE+ + L MY
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG +++A+ +FD N I W +++S Y + G + +F V S S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+ ACA +G+L+ ++ V + D F++ LI+++AKC ++ A VF D
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRD 388
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ WSA+I GY G+A EAI L+ M G+ P++VTF +L A HS
Sbjct: 389 VVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACN-----------HS 437
Query: 303 LIIKMGFSSFTFVAN-----------TVLDFYSKCELLEESLKTFDEMD-EHDVVSWNAL 350
+++ G+ F +A+ V+D + L+++ + M + V W AL
Sbjct: 438 GMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 351 IAGHLASCHYGEAIEL 366
L++C +EL
Sbjct: 498 ----LSACKKHRHVEL 509
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S + +V + L+ M+ K + A+ +FD +R+V+ WSA+I G+ G A++
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+R M + PN T++G + AC G R G RM + C+I++ G+
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGR 471
Query: 124 CGLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVH 160
G L A V + ++ W +LLS+ C +H H
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSA---CKKHRH 506
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/662 (29%), Positives = 352/662 (53%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
T G ++ + L+ MY + DA+++FD M ER+ + W+ ++ G+ + G A+
Sbjct: 174 TLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVE 233
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F M EPN+ T +S A+ D G ++H + GLE V+N L++MY
Sbjct: 234 LFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYA 293
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KC L +F + ++W ++S Q G L +F +KSG+ + S
Sbjct: 294 KCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVS 353
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L A L G ++H + + + D F+ L+++Y KC + +A V+ + + D
Sbjct: 354 LLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAID 413
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ S +I GY G + EA+ +F + G+ P+ V + VL A A + G++LHS
Sbjct: 414 VVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHS 473
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
+K + +V + ++D Y+KC L+ S F ++ D V+WN++I+ + E
Sbjct: 474 YALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEE 533
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+ L ++M EG + T S++L+ + +PAI +GK+ H ++K +++ SAL+D
Sbjct: 534 ALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALID 593
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MY KCG L A +VF+ + KN VSWN+++ Y +GL +E++ + MQE K + T
Sbjct: 594 MYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVT 653
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F+ ++SAC H G V+EG F M ++ I+PRM+H A +V L++ G+ +A E I
Sbjct: 654 FLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDM 713
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
P +P+ +W LL C+ H+++ L A++++ DP ++ ++++SN+ A A WD +
Sbjct: 714 PFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVS 773
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
KVR++MK+ ++K G SW ++ N H F + + D++ + + + L + GY+P
Sbjct: 774 KVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGYIP 833
Query: 663 DP 664
P
Sbjct: 834 MP 835
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 161/561 (28%), Positives = 282/561 (50%), Gaps = 8/561 (1%)
Query: 2 ITSGFHP-NVITYNHLLLMYVKFSRINDAQKLFDEMPERNV---ISWSALISGFSQIGMP 57
+T+G H + L+ MYV R DA +F +P + W+ LI G + G
Sbjct: 66 VTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDY 125
Query: 58 EVALNYFRLMVC--CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
AL ++ M P+ +T+ V +CA+ G G+ +H GL+ + V +
Sbjct: 126 RSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGS 185
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
LI MY GLL A+ VFD ER+ + W ++ Y + G +++F R SG
Sbjct: 186 ALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEP 245
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ + A L A +L G+Q+H+L K LE + VA L+++YAKC+ LD ++F
Sbjct: 246 NFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLF 305
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ DL W+ +I G Q G +A+ LF M SG+ P VT +L A D+
Sbjct: 306 GLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFN 365
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G++LH I++ F+ + ++D Y KC + + +D DVV + +I+G++
Sbjct: 366 QGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYV 425
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+ EA+++ + +L +G PN +++L + + A++ G++ H +K ++
Sbjct: 426 LNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCY 485
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ SAL+DMYAKCGRL+ + +F +S+K+ V+WN+M+ +AQ+G EAL ++ M
Sbjct: 486 VESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG 545
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+K ++ T VLSAC + + G +I+ I + ++++ ++ G A
Sbjct: 546 VKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGP-IRADLFAESALIDMYGKCGNLEWA 604
Query: 536 YEFIKSSPIEPNKVVWRCLLS 556
+ +S P E N+V W +++
Sbjct: 605 HRVFESMP-EKNEVSWNSIIA 624
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 208/427 (48%), Gaps = 8/427 (1%)
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLE-LNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
+ + C S G ++HGR +GL ++ + L+ MY A VF +SL
Sbjct: 43 LAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVF-SSL 101
Query: 139 ERN----SISWVSLLSSYCQCGEHVHGLKIFL--LSRKSGVAISEFSCASVLGACAVLGN 192
R ++ W L+ G++ L +L + S + V+ +CA LG
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+ +G +H L+ D FV LI +YA L A +VF + D W+ ++ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y + G A++LF M +SG P+ T + L A + G QLH+L +K G S
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
VANT++ Y+KC+ L++ K F M D+V+WN +I+G + + +A+ L DM
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK 341
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
G P+ T ++L +D+ GK+ H IV+ +V + SALVD+Y KC +
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRM 401
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A+ V+D + ++V +TM+ GY +G+ +EA++++ + E I+PN VL AC
Sbjct: 402 AQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACAS 461
Query: 493 IGLVEEG 499
+ ++ G
Sbjct: 462 MAAMKLG 468
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 165/336 (49%), Gaps = 10/336 (2%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALE-FDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL C +L +G+Q+H L D + L+ +Y + A VFS+ L
Sbjct: 44 AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSS--L 101
Query: 241 PDLTA-----WSALIGGYAQLGKACEAIDLFVKMFS--SGLMPSEVTFSYVLGAFADVKE 293
P A W+ LI G G A+ ++KM++ S +P TF YV+ + A +
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
GR +H +G FV + ++ Y+ LL ++ + FD M E D V WN ++ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
++ + A+EL DM G PN T + L++S+ + +G Q H VK G +S
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V + + LV MYAKC L+D K+F + +LV+WN M+ G Q+G +AL ++ MQ+
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK 341
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
+ I+P+ T + +L A + +G ++R+
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRN 377
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/567 (33%), Positives = 332/567 (58%), Gaps = 11/567 (1%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
YV + C + + +HG + ++G N V + L+N+Y KCG + A+ VF+
Sbjct: 67 YVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMP 126
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
RN ++W +L+ + Q + H + +F +G S ++ ++VL AC+ L +LK+G Q
Sbjct: 127 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQ 186
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
H+ + K L+FD V L +LY+KC +L+ A + FS I+ ++ +W++ + G
Sbjct: 187 FHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGA 246
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
+ + LFV+M S + P+E T + L ++ G Q+ SL IK G+ S V N+
Sbjct: 247 PVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNS 306
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH----------LASCHYG-EAIELL 367
+L Y K + E+ + F+ MD+ +V+WNA+IAGH L++C G EA+++
Sbjct: 307 LLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIF 366
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+ G P+L+T S++L++ S + AIE G+Q H +K GF S+V++ ++L+ MY KC
Sbjct: 367 SKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKC 426
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G + A K F +S++ +++W +M+ G++QHG+ ++AL I+ M ++PN TF+GVL
Sbjct: 427 GSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVL 486
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC H G+V + +YF M + + I P MDH +V +F G+ +A FIK EP+
Sbjct: 487 SACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPS 546
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
+ +W ++GC++H +L LG YA+E++LS P+D +++L N+Y A+ +D+ ++VRK+
Sbjct: 547 EFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKM 606
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTS 634
M+ + + K SW +++K++ F T+
Sbjct: 607 MEVEKVGKLKDWSWISIKDKVYSFKTN 633
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 247/508 (48%), Gaps = 28/508 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G H N + L+ +Y K + DA+++F+ MP RNV++W+ L+ GF Q P+ A
Sbjct: 90 VMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHA 149
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F+ M+ P+ YT + AC+S + G + H + + L+ ++ V + L ++
Sbjct: 150 IHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSL 209
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L A F E+N ISW S +S+ G V GL++F+ + +EF+
Sbjct: 210 YSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTL 269
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S L C + +L++G Q+ SL K E + V L+ LY K + A R F+ +
Sbjct: 270 TSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDD 329
Query: 241 PDLTAWSALIGGYAQL-----------GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
+ W+A+I G+AQ+ + EA+ +F K+ SG+ P T S VL +
Sbjct: 330 VSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCS 389
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ G Q+H+ IK GF S V+ +++ Y+KC +E + K F EM +++W +
Sbjct: 390 RMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTS 449
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN-------ISSDIPAIEWGKQTH 402
+I G +A+ + +DM G PN T+ +L+ +S + E ++ +
Sbjct: 450 MITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKY 509
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLG 461
+KP D +VDM+ + GRL A ++ + W+ + G H G
Sbjct: 510 --KIKPVMDHY----ECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSH--G 561
Query: 462 REALEIYSMMQENKIKPND-NTFIGVLS 488
L Y+ Q +KP D T++ +L+
Sbjct: 562 NLELGFYASEQLLSLKPKDPETYVLLLN 589
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/608 (33%), Positives = 337/608 (55%), Gaps = 9/608 (1%)
Query: 70 CVLEPNYYTYVG--AVSACASRGDARSGK----EIHGRMYRSGLELNSHVSNCLINMYGK 123
C+ P YT G + S AS D+ + K +IH R+ GL+ + + LI+
Sbjct: 6 CLASPFLYTNSGIHSDSFYASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSS 65
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
G ++ A+ VFD W +++ Y + L ++ + + V+ F+ +
Sbjct: 66 YGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHL 125
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L AC L +L++G +H+ VF+ E D FV GLI LYAKC +L A VF + LP+
Sbjct: 126 LKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPER 185
Query: 244 T--AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
T +W+A++ YAQ G+ EA+++F +M + P V VL AF +++ GR +H
Sbjct: 186 TIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIH 245
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ ++KMG + + ++ Y+KC + + FD+M +++ WNA+I+G+ +
Sbjct: 246 ASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAK 305
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+AI+L +M+ + P+ + ++ ++ + + ++E + + + + +V I SAL+
Sbjct: 306 DAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALI 365
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DM+AKCG + AR VFD +++V W+ M+VGY HG REA+ +Y M+ + + PND
Sbjct: 366 DMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDV 425
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+G+L AC H G+V EGW +FN M DH I+P+ H A ++ L G +AYE IK
Sbjct: 426 TFLGLLIACNHSGMVREGWWFFNRMA-DHKINPQQQHYACIIDLLGRAGHLDQAYEVIKC 484
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P++P VW LLS CK H+ + LG+YAA+++ S DP +T ++ LSN+YA A +WD
Sbjct: 485 MPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRV 544
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A+VR MKEK L KD GCSW E++ ++ F + + ++ + + L +GG+V
Sbjct: 545 AEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 604
Query: 662 PDPIYSSH 669
+ S H
Sbjct: 605 ANKDASLH 612
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 230/465 (49%), Gaps = 11/465 (2%)
Query: 23 FSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGA 82
+ I A+++FD++P V W+A+I G+S+ + AL + M + P+ +T+
Sbjct: 66 YGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHL 125
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA--SLER 140
+ AC + G+ +H +++R G E + V N LI +Y KC L A+ VF+ ER
Sbjct: 126 LKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPER 185
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
+SW +++S+Y Q GE V L+IF RK V + SVL A L +L+ G IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIH 245
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
+ V K LE + + + L +YAKC ++ A +F ++ P+L W+A+I GYA+ G A
Sbjct: 246 ASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAK 305
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
+AIDLF +M + + P ++ + + A A V R + + + + F+++ ++
Sbjct: 306 DAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALI 365
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
D ++KC +E + FD + DVV W+A+I G+ EAI L + M +G PN
Sbjct: 366 DMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDV 425
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T+ +L + + G + + + ++D+ + G L+ A +V +
Sbjct: 426 TFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCM 485
Query: 441 SSKNLVS-WNTMLVGYAQHG---LGREALEIYSMMQENKIKPNDN 481
+ V+ W +L +H LG+ Y+ Q I P++
Sbjct: 486 PVQPGVTVWGALLSACKKHRHVELGK-----YAAQQLFSIDPSNT 525
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 180/378 (47%), Gaps = 29/378 (7%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFD--EMPERNVISWSALISGFSQIGMPEVALN 62
GF +V N L+ +Y K R+ A+ +F+ +PER ++SW+A++S ++Q G P AL
Sbjct: 149 GFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALE 208
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F M ++P+ V ++A D G+ IH + + GLE + L MY
Sbjct: 209 IFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYA 268
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG +++A+ +FD N I W +++S Y + G + +F V S S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITS 328
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+ ACA +G+L+ + V + D F++ LI+++AKC ++ A VF D
Sbjct: 329 AISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRD 388
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ WSA+I GY G+A EAI L+ M G+ P++VTF +L A HS
Sbjct: 389 VVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACN-----------HS 437
Query: 303 LIIKMGFSSFTFVAN-----------TVLDFYSKCELLEESLKTFDEMD-EHDVVSWNAL 350
+++ G+ F +A+ ++D + L+++ + M + V W AL
Sbjct: 438 GMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 351 IAGHLASCHYGEAIELLK 368
L++C +EL K
Sbjct: 498 ----LSACKKHRHVELGK 511
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S + +V + L+ M+ K + A+ +FD +R+V+ WSA+I G+ G A++
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISL 411
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+R M + PN T++G + AC G R G RM + C+I++ G+
Sbjct: 412 YRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGR 471
Query: 124 CGLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVH 160
G L A V + ++ W +LLS+ C +H H
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSA---CKKHRH 506
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/709 (30%), Positives = 364/709 (51%), Gaps = 53/709 (7%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEM--PERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
H++ MY+ F+ A + + V W+ LI +G E L +R M
Sbjct: 62 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 121
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
P++YT+ + AC R G +H ++ SG E N V N L++MYG+CG +A+
Sbjct: 122 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 181
Query: 132 FVFDASLER---NSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGAC 187
VFD ER + +SW S++++Y Q G+ + +K+F ++ G+ S +VL AC
Sbjct: 182 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 241
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A +G G Q+H + L D FV ++++YAKC ++ A++VF +++ D+ +W+
Sbjct: 242 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWN 301
Query: 248 ALIGGYAQLGK-----------------------------------ACEAIDLFVKMFSS 272
A++ GY+Q+G+ EA+D+F +M
Sbjct: 302 AMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLC 361
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS-------SFTFVANTVLDFYSK 325
G P+ VT +L A + G++ H IK + V N ++D YSK
Sbjct: 362 GSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSK 421
Query: 326 CELLEESLKTFDEMDEHD--VVSWNALIAGHLASCHYGEAIELLKDMLFEGH--CPNLYT 381
C+ + + FD + D VV+W LI G+ EA+EL ML + PN +T
Sbjct: 422 CKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFT 481
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV-IGSALVDMYAKCGRLNDARKVFDHL 440
S L + + A+ +G+Q H +++ F+S ++ + + L+DMY+K G ++ AR VFD++
Sbjct: 482 ISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNM 541
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+N VSW +++ GY HG G EAL+I+ MQ+ + P+ TF+ VL AC H G+V++G
Sbjct: 542 HQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGI 601
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKT 560
+YFN M +D G+ P +H A +V L + G+ A E I+ P++P VW LLS C+
Sbjct: 602 NYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRV 661
Query: 561 HKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCS 620
+ ++ LG YAA ++L + + ++ +LSN+YA A W + A++R +MK +KK GCS
Sbjct: 662 YANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCS 721
Query: 621 WTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
W + + F ++ +++++ L + GYVPD ++ H
Sbjct: 722 WVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALH 770
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 144/498 (28%), Positives = 237/498 (47%), Gaps = 58/498 (11%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNV---ISWSALISGFSQIGMP 57
+ SGF NV N L+ MY + +A+++FDEM ER V +SW+++++ + Q G
Sbjct: 152 VFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDS 211
Query: 58 EVALNYFRLMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
A+ F M + + P+ + V + ACAS G GK++HG RSGL + V N
Sbjct: 212 IRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNA 271
Query: 117 LINMYGKCGLLSSAQFVF-----------------------------------DASLERN 141
+++MY KCG++ A VF + +E N
Sbjct: 272 VVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELN 331
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS 201
++W ++++ Y Q G L +F R G + + S+L CA+ G L G + H
Sbjct: 332 VVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHC 391
Query: 202 LVFKCALEFDK-------FVAMGLINLYAKCEKLDLASRVFSNIQLPD--LTAWSALIGG 252
K L D+ V LI++Y+KC+ A +F I D + W+ LIGG
Sbjct: 392 HAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGG 451
Query: 253 YAQLGKACEAIDLFVKMFSSG--LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF- 309
AQ G+A EA++LF +M +MP+ T S L A A + GRQ+H+ +++ F
Sbjct: 452 NAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFE 511
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
S+ FVAN ++D YSK ++ + FD M + + VSW +L+ G+ EA+++ +
Sbjct: 512 SAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYE 571
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA----LVDMYA 425
M G P+ T+ +L S ++ G + K D VV G+ +VD+ +
Sbjct: 572 MQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNK---DFGVVPGAEHYACMVDLLS 628
Query: 426 KCGRLNDARKVFDHLSSK 443
+ GRL++A ++ + K
Sbjct: 629 RAGRLDEAMELIRGMPMK 646
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/653 (32%), Positives = 334/653 (51%), Gaps = 88/653 (13%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN + + +C AR + +H R+ + + + N LI++YGKC L A+ +
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 134 FDASLERNSISWVSLLS---------------------SYCQCGEHVHG----------L 162
FD +RN+ +W SL+S C V G L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 163 KIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
+ F+ + ++E+S S L ACA L +L +G Q+H+LV K D ++ LI++Y
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
+KC + A VFS + +L W++LI Y Q G A EA+++FV+M SGL P EVT +
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFD---- 337
V+ A A + G Q+H+ ++K F + N ++D Y+KC + E+ + FD
Sbjct: 253 SVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI 312
Query: 338 ---------------------------EMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
+M + +VVSWNALIAG+ + EA+ L + +
Sbjct: 313 RNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLL 372
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
E P YT+ N+L S++ +G++L+DMY KCG +
Sbjct: 373 KRESIWPTHYTFGNLLK------------------------SDIFVGNSLIDMYMKCGSI 408
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
D +VF+ + ++ VSWN ++VGYAQ+G G EAL+I+ M KP+ T IGVL AC
Sbjct: 409 EDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCAC 468
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
H GLVEEG HYF SM +HG+ P DH +V L G A I++ P+ P+ VV
Sbjct: 469 SHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVV 527
Query: 551 WRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
W LL+ CK H ++ +G++AAEK+L DP ++ +++LSN+YAE W + +VRK+M++
Sbjct: 528 WGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQ 587
Query: 611 KSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ + K GCSW E+++++H F + ++ V+ L+ + GY+PD
Sbjct: 588 QGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPD 640
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 156/344 (45%), Gaps = 61/344 (17%)
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+P+ F+ +L + + G R +H+ I+ FS F+ N ++D Y KC+ L+++ K
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 335 TFDE-------------------------------MDEHDVVSWNALIAGHLASCHYGEA 363
FD M E D SWN++++G + E+
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+E M E N Y++ + L+ + + + G Q H + K + ++V +GSAL+DM
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y+KCG + A +VF + +NLV+WN+++ Y Q+G EALE++ M ++ ++P++ T
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA---------------- 527
V+SAC + ++EG +++ + + ++V ++A
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311
Query: 528 --------------CRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
R + +A F+ S + N V W L++G
Sbjct: 312 IRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAG 355
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L++D+ + PN ++ +L+ + + H I+ F + I + L+D+Y
Sbjct: 6 LVRDL----YLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYG 61
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KC L+DARK+FD + +N +WN+++ + G EA ++ M E P+ ++
Sbjct: 62 KCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPE----PDQCSWNS 117
Query: 486 VLSACVHIGLVEEGWHYFNSMIRD 509
++S EE YF M R+
Sbjct: 118 MVSGFAQHDRFEESLEYFVKMHRE 141
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/665 (30%), Positives = 372/665 (55%), Gaps = 3/665 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G NV + L+ +YVK I+DA+K+FD E+N++ W+A++ GF Q + E +
Sbjct: 351 VKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETI 410
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M LE + +T+V + AC + G+++H ++G++ + V+N +++MY
Sbjct: 411 QMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMY 470
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G + A+ +F ++S+SW +L+ E + + + G+A+ E S A
Sbjct: 471 SKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFA 530
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ + AC+ + ++ G QIHS K + + V LI+LY+K ++ + +V +++
Sbjct: 531 TAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDAS 590
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ +ALI G Q + EAI+LF ++ G PS TF+ +L ++ G+Q+H
Sbjct: 591 SIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVH 650
Query: 302 SLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLASCH 359
+K + T + +++ Y KC+LLE++ K +E+ +H ++V W A I+G+ + +
Sbjct: 651 CYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGY 710
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+++ + M + T++++L S++ A+ GK+ H IVK GF S SA
Sbjct: 711 SVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSA 770
Query: 420 LVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+DMY+KCG + + ++F L ++ N++ WN+M+VG+A++G EAL ++ MQE++IKP
Sbjct: 771 LMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKP 830
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+D T +GVL AC H GL+ EG H+F+SM + +GI PR+DH A ++ L G ++A E
Sbjct: 831 DDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEV 890
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I P + V+W L+ C+ HKD G+ AA+K++ +P+ +S ++ LS+++A A W
Sbjct: 891 IDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNW 950
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
E R+ M+EK + K GCSW + NK F + ++++++ L+ +
Sbjct: 951 VEAKVAREAMREKGVMKFPGCSWITVGNKQSVFVVQDTHHPDALSIYKMLDDLTGMMNKD 1010
Query: 659 GYVPD 663
G + +
Sbjct: 1011 GRIKE 1015
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/555 (29%), Positives = 290/555 (52%), Gaps = 3/555 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G P+ +T ++ R+ DA+ L + + ++W+A+I+ +SQ G+ +
Sbjct: 253 GSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLY 312
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M L P T+ +SA A+ G++IH + GL+ N V + LIN+Y K
Sbjct: 313 KDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKH 372
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G +S A+ VFD S E+N + W ++L + Q +++F R++ + +F+ SVL
Sbjct: 373 GCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVL 432
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
GAC L +L +G Q+H + K ++ D FVA ++++Y+K +D+A +FS I + D
Sbjct: 433 GACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSV 492
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ALI G A + EAI++ +M G+ EV+F+ + A +++ G+Q+HS
Sbjct: 493 SWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSAS 552
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK S V ++++D YSK +E S K +D +V NALI G + + EAI
Sbjct: 553 IKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAI 612
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSALVDM 423
EL + +L +G P+ +T+++IL+ + + GKQ HC +K + + +G +LV +
Sbjct: 613 ELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGI 672
Query: 424 YAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
Y KC L DA K+ + + KNLV W + GYAQ+G ++L ++ M+ ++ ++ T
Sbjct: 673 YLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEAT 732
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F VL AC + + +G + +I G ++++ +++ G ++E K
Sbjct: 733 FTSVLKACSEMAALTDG-KEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKEL 791
Query: 543 PIEPNKVVWRCLLSG 557
N + W ++ G
Sbjct: 792 KNRQNIMPWNSMIVG 806
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 243/492 (49%), Gaps = 35/492 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF +V L+ MY K ++DA+++FD + + I W+++I+G+ ++G + A
Sbjct: 183 VLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQA 242
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M P+ T V +S AS G + + R+ +
Sbjct: 243 LALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMT--------------- 287
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
++++W ++++SY Q G ++ +K G+ + +
Sbjct: 288 --------------------STVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTF 327
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L A A + G QIH+ K L+ + FV LINLY K + A +VF
Sbjct: 328 ASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTE 387
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+A++ G+ Q E I +F M + L + TF VLGA ++ GRQ+
Sbjct: 388 KNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQV 447
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + IK G + FVAN +LD YSK ++ + F + D VSWNALI G +
Sbjct: 448 HCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEE 507
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
GEAI +LK M F G + +++ +N S+I AIE GKQ H +K SN +GS+L
Sbjct: 508 GEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSL 567
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+D+Y+K G + +RKV H+ + ++V N ++ G Q+ EA+E++ + ++ KP++
Sbjct: 568 IDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSN 627
Query: 481 NTFIGVLSACVH 492
TF +LS C
Sbjct: 628 FTFTSILSGCTR 639
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 235/469 (50%), Gaps = 40/469 (8%)
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD--ASLERNSISWVSLL 149
AR+ +H R+ R GL L + + L+++YG+ G + A +S + S+L
Sbjct: 69 ARACGVLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVL 128
Query: 150 SSYCQCGEHVHGLKIFLLSRKS-GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
S + + G L F R S G +F A VL AC+ LG L+ G Q+H V K
Sbjct: 129 SCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGF 188
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
F GL+++YAKC ++D A R+F I PD W+++I GY ++G+ +A+ LF +
Sbjct: 189 CSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSR 248
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M G +P +VT ++ A + R +L+ ++ +S
Sbjct: 249 MEKMGSVPDQVTCVTIISTLASMGRLGDAR---TLLKRIRMTS----------------- 288
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
V+WNA+IA + S E L KDM +G P T+++IL+
Sbjct: 289 ---------------TVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSA 333
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
++++ A + G+Q H VK G D+NV +GS+L+++Y K G ++DA+KVFD + KN+V W
Sbjct: 334 AANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMW 393
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
N +L G+ Q+ L E ++++ M+ ++ +D TF+ VL AC+++ ++ G I+
Sbjct: 394 NAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIK 453
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ G+ + +++ +++ G A P++ + V W L+ G
Sbjct: 454 N-GMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVK-DSVSWNALIVG 500
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/594 (23%), Positives = 270/594 (45%), Gaps = 71/594 (11%)
Query: 47 LISGFSQIGMPEVALNYFRLMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS 105
++S ++ G P L+ F+ + C + P+ + +SAC+ G G+++H + +S
Sbjct: 127 VLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKS 186
Query: 106 GLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF 165
G + L++MY KCG + A+ +FD ++I W S+++ Y + G + L +F
Sbjct: 187 GFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALF 246
Query: 166 LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC 225
K G + +C +++ A +G
Sbjct: 247 SRMEKMGSVPDQVTCVTIISTLASMG---------------------------------- 272
Query: 226 EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
+L A + I++ AW+A+I Y+Q G E L+ M GLMP+ TF+ +L
Sbjct: 273 -RLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASIL 331
Query: 286 GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
A A++ GRQ+H+ +K G + FV +++++ Y K + ++ K FD E ++V
Sbjct: 332 SAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIV 391
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
WNA++ G + + E I++ + M + +T+ ++L ++ +++ G+Q HC
Sbjct: 392 MWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCIT 451
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
+K G D+++ + +A++DMY+K G ++ A+ +F + K+ VSWN ++VG A + EA+
Sbjct: 452 IKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAI 511
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR-----DHGISPRM---- 516
+ M+ I ++ +F ++AC +I +E G ++ I+ +H + +
Sbjct: 512 NMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLY 571
Query: 517 ------------------DHIASVVHLFACRGQTRRAYEFIK------SSPIEPNKVVWR 552
I + L Q R E I+ +P+ +
Sbjct: 572 SKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFT 631
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTD--PEDTSAHIMLSNVYAEANMWDETAKV 604
+LSGC V+G+ L + +DTS I L +Y + + ++ K+
Sbjct: 632 SILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKL 685
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK--NLVSWNTMLVGYAQHG 459
H I++ G +G ALVD+Y + GR+ A + + + + +++L +A+ G
Sbjct: 76 HARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARSG 135
Query: 460 LGREALEIYSMMQENKIKPNDNTFIG-VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
R+ L+ + ++ + D I VLSAC +G +E G +++ G +
Sbjct: 136 SPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKS-GFCSSVFC 194
Query: 519 IASVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA---- 571
A +V ++A G+ RR ++ I P+ + W +++G H+ +GRY
Sbjct: 195 QAGLVDMYAKCGEVDDARRMFDGIAC----PDTICWTSMIAG--YHR---VGRYQQALAL 245
Query: 572 ----EKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
EK+ S P+ + ++S + + + D +++I
Sbjct: 246 FSRMEKMGSV-PDQVTCVTIISTLASMGRLGDARTLLKRI 284
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/651 (32%), Positives = 344/651 (52%), Gaps = 1/651 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM- 67
N++ N L VK ++ ++ +FD+M R+ ISW+ LI+G+ AL F M
Sbjct: 89 NMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMW 148
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
V L+ + + A+ AC + G+ +HG +SGL + VS+ LI+MY K G +
Sbjct: 149 VQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKI 208
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
VF +RN +SW ++++ G ++ L F S V + A L A
Sbjct: 209 EQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKAS 268
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A L G IH+ K + FV L +Y KC K D R+F +++PD+ +W+
Sbjct: 269 ADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWT 328
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
LI Y Q G+ A++ F +M S + P++ TF+ V+ A A++ G Q+H ++++
Sbjct: 329 TLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRL 388
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
G VAN+++ YSK LL+ + F + D++SW+ +IA + + EA + L
Sbjct: 389 GLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYL 448
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M EG PN + S++L++ + +E GKQ H ++ G D ++ SAL+ MY+KC
Sbjct: 449 SWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKC 508
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G + +A K+F+ + N++SW M+ GYA+HG +EA+ ++ + +KP+ TFIGVL
Sbjct: 509 GSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVL 568
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
+AC H G+V+ G++YF M ++ ISP +H ++ L G+ A I+S P +
Sbjct: 569 TACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTD 628
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
VVW LL C+ H D+ GR+ AE++L DP HI L+N+YA W E A +RK+
Sbjct: 629 DVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKL 688
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
MK K + K+ G SW + +K++ F A Q + V+ LS ++ D
Sbjct: 689 MKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELLSANIGDA 739
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 163/567 (28%), Positives = 267/567 (47%), Gaps = 43/567 (7%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG +V + L+ MY+K +I ++F +M +RNV+SW+A+I+G G AL
Sbjct: 184 VKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEAL 243
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
YF M + + +T+ A+ A A GK IH + + G + +S V N L MY
Sbjct: 244 LYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMY 303
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG +F+ + +SW +L+++Y Q GE H ++ F RKS V+ ++++ A
Sbjct: 304 NKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFA 363
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+V+ ACA L K G QIH V + L VA ++ LY+K L AS VF I
Sbjct: 364 AVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRK 423
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +WS +I Y+Q G A EA D M G P+E S VL + G+Q+H
Sbjct: 424 DIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVH 483
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ ++ +G V + ++ YSKC +EE+ K F+ M ++++SW A+I G+ +
Sbjct: 484 AHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQ 543
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVVI 416
EAI L + + G P+ T+ +L S ++ G T+ + P +
Sbjct: 544 EAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHY--- 600
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHG---LGREALEIYSMMQ 472
++D+ + GRL++A + + + V W+T+L HG GR E Q
Sbjct: 601 -GCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAE-----Q 654
Query: 473 ENKIKPND-NTFI---------GVLSACVHI-------GLVEE-GWHY------FNSMIR 508
++ PN T I G HI G+++E GW + N+ +
Sbjct: 655 LLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVA 714
Query: 509 DHGISPRMDHIASVVHLFACR-GQTRR 534
P+ +HI +V+ L + G R+
Sbjct: 715 GDQAHPQSEHITTVLELLSANIGDARQ 741
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/718 (30%), Positives = 368/718 (51%), Gaps = 64/718 (8%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
PNVIT+N ++ Y K ++DA +LF MP R+V SW+ ++SG+ Q G AL+ F M
Sbjct: 90 PNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSM 149
Query: 68 VCCVLE-PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
PN +T+ + +C + G ++ G + + + + V L++M +CG
Sbjct: 150 RQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGA 209
Query: 127 L--SSAQF-----------------------------VFDASLERNSISWVSLLSSYCQC 155
+ +S QF +F + ER+ +SW ++S+ +
Sbjct: 210 MDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKS 269
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G L + + GV + S L ACA L +L+ G Q+H V + D +VA
Sbjct: 270 GRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVA 329
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
++ LYAKC A RVFS+++ + +W+ LIGG+ Q G E+++LF +M + +
Sbjct: 330 SAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMA 389
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE----- 330
+ + ++ + + G QLHSL +K G + V+N+++ Y+KC L+
Sbjct: 390 VDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELI 449
Query: 331 --------------------------ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
++ + FD+M +V++WNA++ ++ + +
Sbjct: 450 FNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGL 509
Query: 365 ELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
++ DML E P+ TY + +DI A + G Q VK G + + +A++ M
Sbjct: 510 KMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITM 569
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y+KCGR+++ARK FD LS K+LVSWN M+ GY+QHG+G++A+EI+ + KP+ ++
Sbjct: 570 YSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISY 629
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ VLS C H GLVEEG YF+ M RDH ISP ++H + +V L G A I P
Sbjct: 630 VAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMP 689
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
++P VW LLS CKTH + L AA+ + D + +++L+ +YA+A D++A+
Sbjct: 690 MKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQ 749
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
VRK+M++K +KK G SW E+ N++H F + Q I + E +++L + GYV
Sbjct: 750 VRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYV 807
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 241/490 (49%), Gaps = 40/490 (8%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+P +I N +L+ Y K ++ A ++F MPER+V+SW+ +IS S+ G AL+
Sbjct: 222 NPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVD 281
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + P+ TY +++ACA GK++H ++ R+ ++ +V++ ++ +Y KCG
Sbjct: 282 MHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGC 341
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
A+ VF + +RNS+SW L+ + Q G +++F R +A+ +F+ A+++
Sbjct: 342 FKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISG 401
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
C ++ +G Q+HSL K V+ LI++YAKC L A +F+ + D+ +W
Sbjct: 402 CCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSW 461
Query: 247 SALIGGYAQLGKACEAIDLF---------------------------VKMFSSGL----- 274
+ +I Y+Q+G +A + F +KM+S L
Sbjct: 462 TGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDV 521
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+P VT+ + AD+ G Q+ +K+G T V N V+ YSKC + E+ K
Sbjct: 522 IPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARK 581
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
FD + D+VSWNA+I G+ +AIE+ D+L +G P+ +Y +L+ S
Sbjct: 582 AFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGL 641
Query: 395 IEWGKQTHCCIVKPGFDSNVVIG----SALVDMYAKCGRLNDARKVFDHLSSKNLVS-WN 449
+E GK + + D N+ G S +VD+ + G L +A+ + D + K W
Sbjct: 642 VEEGKFYFDMMKR---DHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWG 698
Query: 450 TMLVGYAQHG 459
+L HG
Sbjct: 699 ALLSACKTHG 708
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/563 (25%), Positives = 261/563 (46%), Gaps = 83/563 (14%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
T + A +C + DAR+ + R + E N N ++N Y K G LS A +F
Sbjct: 65 TLLHAYLSCGALSDARN-------LLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGR 117
Query: 137 SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI-SEFSCASVLGACAVLGNLKV 195
R+ SW +++S Y Q G+ ++ L IF+ R++G ++ + F+ V+ +C LG +V
Sbjct: 118 MPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEV 177
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP-------------- 241
+Q+ L+ K + D V L+++ +C +D AS+ FS I+ P
Sbjct: 178 ALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAK 237
Query: 242 -----------------DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYV 284
D+ +W+ +I ++ G+ EA+D+ V M G+ P T++
Sbjct: 238 SHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSS 297
Query: 285 LGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDV 344
L A A + G+QLH +I+ +VA+ +++ Y+KC +E+ + F + + +
Sbjct: 298 LTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNS 357
Query: 345 VSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCC 404
VSW LI G L + E++EL M E + + + +++ + I G Q H
Sbjct: 358 VSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSL 417
Query: 405 IVKPGFDSNVVIGSALVDMYAKCGRLND-------------------------------A 433
+K G VV+ ++L+ MYAKCG L + A
Sbjct: 418 CLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKA 477
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS-MMQENKIKPNDNTFIGVLSACVH 492
R+ FD +S++N+++WN ML Y QHG + L++YS M+ E + P+ T++ + C
Sbjct: 478 REFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCAD 537
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNKV 549
IG + G ++ G+ + +V+ +++ G + R+A++F+ + V
Sbjct: 538 IGANKLGDQIIGHTVK-VGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDL----V 592
Query: 550 VWRCLLSGCKTHKDLVLGRYAAE 572
W +++G H +G+ A E
Sbjct: 593 SWNAMITGYSQHG---MGKQAIE 612
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 32/227 (14%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG V+ N L+ MY K + +A+ +F+ M ER+++SW+ +I+ +SQ+G A
Sbjct: 419 LKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAR 478
Query: 62 NYF-----------RLMVCCVLE---------------------PNYYTYVGAVSACASR 89
+F M+ ++ P++ TYV CA
Sbjct: 479 EFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADI 538
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
G + G +I G + GL L++ V N +I MY KCG +S A+ FD ++ +SW +++
Sbjct: 539 GANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMI 598
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
+ Y Q G ++IF G S +VL C+ G ++ G
Sbjct: 599 TGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEG 645
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 139/331 (41%), Gaps = 76/331 (22%)
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL--------------------------- 328
G R LHS +I +G +S F+ NT+L Y C
Sbjct: 43 GARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMNGY 102
Query: 329 -----LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTY 382
L ++++ F M DV SWN +++G+ S + A+++ M G PN +T+
Sbjct: 103 AKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTF 162
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
++ + E Q + K + + +ALVDM +CG ++ A K F + +
Sbjct: 163 GCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKN 222
Query: 443 KNLVSWNTMLVGYAQ-HGLG------------------------------REALEIYSMM 471
++ N+MLVGYA+ HG+ REAL++ M
Sbjct: 223 PTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDM 282
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD-HIAS-VVHLFA-- 527
++P+ T+ L+AC + +E G +IR+ P +D ++AS +V L+A
Sbjct: 283 HGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRN---LPHIDPYVASAMVELYAKC 339
Query: 528 -CRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
C + +R + SS + N V W L+ G
Sbjct: 340 GCFKEAKRVF----SSLRDRNSVSWTVLIGG 366
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 38/141 (26%)
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR------------------- 434
A+ + H ++ G S V + + L+ Y CG L+DAR
Sbjct: 40 ALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMM 99
Query: 435 -------------KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPND 480
++F + ++++ SWNT++ GY Q G AL+I+ SM Q PN
Sbjct: 100 NGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNA 159
Query: 481 NTFIGVLSACVHIGLVEEGWH 501
TF V+ +C + GWH
Sbjct: 160 FTFGCVMKSCGAL-----GWH 175
>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
Length = 691
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/582 (34%), Positives = 324/582 (55%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL MY K + A++LFD MPERN++S+ L+ +Q G E A FR + E
Sbjct: 100 NVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N + + + A +H ++ G + N+ V + LI+ Y C L+S A+ V
Sbjct: 160 VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHV 219
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ + ++++ W +++S Y + + ++F R SG + F+ SVL A L ++
Sbjct: 220 FNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSV 279
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G IH K + + V L+++YAKC + A F I D+ S +I Y
Sbjct: 280 VLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRY 339
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
AQ + +A +LF+++ S ++P+E + S VL A ++ + G+Q+H+ IK+G S
Sbjct: 340 AQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDL 399
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
FV N ++DFY+KC ++ SLK F + + + VSWN ++ G S EA+ + +M
Sbjct: 400 FVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAA 459
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
TYS++L + +I Q HC I K F+++ VIG++L+D YAKCG + DA
Sbjct: 460 QMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDA 519
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
KVF HL ++++SWN ++ GYA HG +ALE++ M ++ ++ ND TF+ +LS C
Sbjct: 520 LKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSST 579
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLV G F+SM DHGI P M+H +V L G+ A +FI P P+ +VWR
Sbjct: 580 GLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRA 639
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
LLS C HK++ LGR++AEKIL +P+D + +++LSN+YA A
Sbjct: 640 LLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAA 681
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/483 (29%), Positives = 248/483 (51%), Gaps = 8/483 (1%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGL--ELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
+ C +RGDAR G+ +HG + R G L+ +N L+NMYGK G L+SA+ +FD ER
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
N +S+V+L+ ++ Q G+ +F R G +++F ++L + + +H
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
S +K + + FV GLI+ Y+ C + A VF+ I D W+A++ Y++
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
A +F KM SG P+ + VL A + + G+ +H IK + V +L
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
D Y+KC ++++ F+ + DV+ + +I+ + S +A EL ++ PN Y
Sbjct: 306 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 365
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
+ S++L +++ +++GKQ H +K G +S++ +G+AL+D YAKC ++ + K+F L
Sbjct: 366 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
N VSWNT++VG++Q GLG EAL ++ MQ ++ T+ VL AC +
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485
Query: 501 HYFNSMIRDHGISPRMDHIA--SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
S+ + + D + S++ +A G R A + + +E + + W ++SG
Sbjct: 486 QIHCSIEKS---TFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGY 541
Query: 559 KTH 561
H
Sbjct: 542 ALH 544
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 245/489 (50%), Gaps = 10/489 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N + L+ Y S ++DA+ +F+ + ++ + W+A++S +S+ PE A F
Sbjct: 192 GHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVF 251
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M +PN + + A GK IHG ++ + HV L++MY KC
Sbjct: 252 SKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKC 311
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A+ F+ + I ++S Y Q ++ ++FL +S V +E+S +SVL
Sbjct: 312 GDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVL 371
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC + L G QIH+ K E D FV L++ YAKC +D + ++FS+++ +
Sbjct: 372 QACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEV 431
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ ++ G++Q G EA+ +F +M ++ + ++VT+S VL A A Q+H I
Sbjct: 432 SWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSI 491
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
K F++ T + N+++D Y+KC + ++LK F + E D++SWNA+I+G+ +A+
Sbjct: 492 EKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADAL 551
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFDSNVVIGSALVDM 423
EL M N T+ +L++ S + G + + G ++ + +V +
Sbjct: 552 ELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRL 611
Query: 424 YAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQH---GLGREALEIYSMMQENKIKPN 479
+ GRLNDA + + D S+ + + W +L H LGR +S + +I+P
Sbjct: 612 LGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR-----FSAEKILEIEPQ 666
Query: 480 DNTFIGVLS 488
D T +LS
Sbjct: 667 DETTYVLLS 675
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 163/338 (48%), Gaps = 6/338 (1%)
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFK--CALEFDKFVAMGLINLYAKCEKLDLAS 232
+ F+CA L C G+ + G +H V + D F A L+N+Y K L A
Sbjct: 57 VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG-AFA-D 290
R+F + ++ ++ L+ +AQ G A LF ++ G ++ + +L A A D
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
GG +HS K+G FV + ++D YS C L+ ++ F+ + D V W A+
Sbjct: 177 AAGLAGG--VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
++ + + A + M G PN + +++L + +P++ GK H C +K
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
D+ +G AL+DMYAKCG + DAR F+ + +++ + M+ YAQ +A E++
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+ + + PN+ + VL AC ++ ++ G N I+
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 392
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 12/256 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G ++ N L+ Y K + ++ + K+F + + N +SW+ ++ GFSQ G+ E AL
Sbjct: 391 IKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEAL 450
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F M + TY + ACAS R +IH + +S ++ + N LI+ Y
Sbjct: 451 SVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTY 510
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A VF +ER+ ISW +++S Y G+ L++F KS V ++ +
Sbjct: 511 AKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFV 570
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL------INLYAKCEKLDLASRVF 235
++L C+ G+ H L ++ D + + + L + +L+ A +
Sbjct: 571 ALLSVCS-----STGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFI 625
Query: 236 SNI-QLPDLTAWSALI 250
+I P W AL+
Sbjct: 626 GDIPSAPSAMVWRALL 641
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/650 (31%), Positives = 357/650 (54%), Gaps = 7/650 (1%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P+V+ L +K R+ DA LFD MP +NV++W+ ISG ++ G PE A F M
Sbjct: 68 PDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADM 127
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
+ + PN + A++ACA+ G G+++H R+G ++ + +CLI +Y +CG L
Sbjct: 128 LESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSL 187
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+A+ VF + + + SL+S+ C+ GE + + + G+ +E + S+L C
Sbjct: 188 RAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAEC 247
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+G QIH + K + + LI+ Y++ A VF N++ ++ +W
Sbjct: 248 P----RGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWC 303
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+++ + G+ +A+ +F +M S G+ P+E FS L A V GRQ+H IK
Sbjct: 304 SMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSV---CLGRQIHCSAIKR 360
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
+ V+N +L Y + + E +++ D+VSW A I+ + + +A+ LL
Sbjct: 361 DLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALL 420
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M EG PN Y +S+ L+ +D+ + G+Q HC +K G D V G+AL++MY+KC
Sbjct: 421 LQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKC 480
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
GR+ AR FD + + +++SWN+++ G AQHG ALE +S M + +P+D+TF+ VL
Sbjct: 481 GRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVL 540
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
C H GLV+EG +F M +G++P H A ++ + G+ A I++ P EP+
Sbjct: 541 VGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPD 600
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
++W+ LL+ CK H++L +G+ AA+K++ D+++++++SN+YA W + +VR+
Sbjct: 601 VLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRR 660
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
M E +KKD G SW E++N+++ F + +++++ +L V + D
Sbjct: 661 MDEIGVKKDAGWSWIEVKNEVNTFVAGDMSHPDSTSIYQMLAELLVVMQD 710
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 222/459 (48%), Gaps = 9/459 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + + L+ +Y + + A+++F M +V+ +++L+S + G A+
Sbjct: 163 VRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAV 222
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M L+PN +T ++ C RG G++IHG M + + + S LI+ Y
Sbjct: 223 DVLCQMTRQGLQPNEHTMTSMLAEC-PRG---IGEQIHGYMLKVMGSQSVYASTALIDFY 278
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+ G +A+ VF+ +N +SW S++ + G L++F GV +EF+ +
Sbjct: 279 SRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFS 338
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
L AC G++ +G QIH K L D V+ L+++Y + + V I+ P
Sbjct: 339 IALSAC---GSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENP 395
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
DL +W+A I Q G + +A+ L ++M S G P++ FS L + AD+ GRQLH
Sbjct: 396 DLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLH 455
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
L +K+G N +++ YSKC + + FD MD HDV+SWN+LI G
Sbjct: 456 CLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDAN 515
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV-KPGFDSNVVIGSAL 420
A+E +M P+ T+ ++L + ++ G+ + + G + +
Sbjct: 516 LALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACM 575
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
+DM + GR +A ++ +++ +++ W T+L H
Sbjct: 576 IDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLH 614
>gi|296085266|emb|CBI28998.3| unnamed protein product [Vitis vinifera]
Length = 732
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/631 (33%), Positives = 351/631 (55%), Gaps = 7/631 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF ++ + N+L+ MY K + K+F EMP +N++SW+ ++SG Q G E+
Sbjct: 102 IIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMG 161
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRG------DARSGKEIHGRMYRSGLELNSHVS 114
L + M+ L PN + ACA+ G + G++IHG + +S + ++ V
Sbjct: 162 LGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEVGFSTAVM 221
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N L++MY K G A VFD +++ ISW ++ + Q + + F +G+
Sbjct: 222 NSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLK 281
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ + + + C +L G+Q H L F+ + + V LIN++++C + +A V
Sbjct: 282 PNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLV 341
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F + + + +I GY EA++LF + GL E TFS L A +
Sbjct: 342 FDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQ 401
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
GRQ+H I+K GF+S +V +++L Y LL++S + F+ ++ D+VSW A+I+
Sbjct: 402 KLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISAL 461
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ + EAI LL + G P+ + + +I N + I A K H +VK G++++V
Sbjct: 462 VHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHV 521
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ SA++D YAKCG + +AR+VFD S ++++ +NTM++ YA HGL REA+E + M+
Sbjct: 522 FVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKL 581
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
++P+ TF+ V+SAC H+GLVE+G +F SM D+G+ P D+ +V LF+ G
Sbjct: 582 ATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLE 641
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A I++ P P +WR LL+GC+ H + LG +AA+K+L PE+ +A+++LS VY+
Sbjct: 642 DAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWAAKKLLQLVPENDAAYVLLSKVYS 701
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
E W + AKVRK M E+ L KD GCSW E+
Sbjct: 702 EEGSWSDAAKVRKGMIERGLWKDPGCSWIEI 732
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 199/405 (49%), Gaps = 6/405 (1%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
G +IH ++ + G + N LI MY KCG L+ VF +N +SW ++S Q
Sbjct: 95 GSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQ 154
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASV------LGACAVLGNLKVGMQIHSLVFKCAL 208
GE GL ++L ++G+ +EF+ V LG C V+GNL G QIH L+ + +
Sbjct: 155 NGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEV 214
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
F V L+++Y K A +VF +Q D+ +W+ + G +Q A E F K
Sbjct: 215 GFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHK 274
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
+ +GL P+ VTFS + + + + G Q H L + G S V +++++ +S+C
Sbjct: 275 LMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGA 334
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+ + FD + + N +I+G+ +CH EA+ L ++ G + T+S+ L
Sbjct: 335 MRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEA 394
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ G+Q H IVK GF S + S+L+ Y G L+D+ + F+ + +LVSW
Sbjct: 395 CFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSW 454
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
M+ G EA+ + + ++E KP++ F + + C I
Sbjct: 455 GAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGI 499
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 188/414 (45%), Gaps = 23/414 (5%)
Query: 169 RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
R A+S S C +LG+ QIH+ + K D F LI +Y KC L
Sbjct: 73 RNDPTALSTALTHSANSKCILLGS-----QIHAQIIKLGFCNDIFSQNNLIRMYTKCGFL 127
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYV---- 284
+VF + + +L +W+ ++ G Q G+ + ++++M +GL+P+E V
Sbjct: 128 AGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKAC 187
Query: 285 --LGAFADVKETIGGRQLHSLIIK--MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
LG V GRQ+H LII+ +GFS T V N+++D Y K +LK FD +
Sbjct: 188 AALGGCLVVGNLNFGRQIHGLIIQSEVGFS--TAVMNSLMDMYFKNGGGLYALKVFDRLQ 245
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
+ D++SWN + AG E ++ G PN T+S + + + G Q
Sbjct: 246 DKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQ 305
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
HC + G + S+L++M+++CG + A VFD K++ + N M+ GY +
Sbjct: 306 FHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCH 365
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
EAL ++ + ++ ++ TF L AC + G ++++ G + + +
Sbjct: 366 NAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKS-GFASQGYVCS 424
Query: 521 SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKI 574
S++ + G ++EF + V W ++S LV Y++E I
Sbjct: 425 SLLKCYVGFGLLDDSFEFFNGVE-RLDLVSWGAMISA------LVHKGYSSEAI 471
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/667 (32%), Positives = 352/667 (52%), Gaps = 10/667 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE-RNVISWSALISGFSQIGMPEVA 60
+ G + N L+ MY K ++ A ++F+ M + R+V SW+++ISG Q GM A
Sbjct: 191 VKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQA 250
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR M VL N YT VG + C G+E+H + +SG E+N N L+ M
Sbjct: 251 LDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC-NALLVM 309
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + SA VF E++ ISW S+LS Y Q G + ++ + G
Sbjct: 310 YTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACI 369
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+ A LG L G ++H+ K L+ D V L+++Y KC ++ ++ VF +++
Sbjct: 370 VSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRI 429
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +W+ +I YAQ + EA+++F + G+ + +L A + ++ + +QL
Sbjct: 430 KDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQL 489
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H I+ G V N ++D Y +C + SLK F+ +++ D+V+W ++I + S
Sbjct: 490 HCYAIRNGLLDLV-VKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLL 548
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ L +M P+ +IL + ++ GK+ H +++ F I S+L
Sbjct: 549 NEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSL 608
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMY+ CG L+ A KVF+ + K++V W M+ HG G++A++++ M + + P+
Sbjct: 609 VDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDH 668
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
+F+ +L AC H LV EG Y + M+ + + P +H A VV L GQT AYEFIK
Sbjct: 669 VSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIK 728
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
S P++P VVW LL C+ HK+ L AA ++L +P++ ++++SNV+AE W+
Sbjct: 729 SMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNN 788
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTS----RFAQFQGIDLHEVMNQLSVHLF 656
+VR + E+ L+KD CSW E+ N +H F+T R A+ + L E+ +L
Sbjct: 789 AKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRK--- 845
Query: 657 DGGYVPD 663
+GGY D
Sbjct: 846 EGGYTED 852
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 153/497 (30%), Positives = 254/497 (51%), Gaps = 6/497 (1%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM---VCCVL 72
LL MY K R+ DA+ LFD M R V SW+ALI + G AL +R M +
Sbjct: 101 LLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGV 160
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P+ T + A GD R G E+HG + GL+ ++ V+N LI MY KCG+L SA
Sbjct: 161 APDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMR 220
Query: 133 VFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VF+ + R+ SW S++S Q G + L +F +++ ++++ ++ VL C L
Sbjct: 221 VFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELA 280
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
L +G ++H+ + K E + L+ +Y KC ++D A RVF I D +W++++
Sbjct: 281 QLNLGRELHAALLKSGSEVN-IQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLS 339
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
Y Q G EAI+ +M G P + A + + G+++H+ IK S
Sbjct: 340 CYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDS 399
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
T V NT++D Y KC +E S FD M D +SW +I + S + EA+E+ ++
Sbjct: 400 DTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQ 459
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
EG + +IL S + I KQ HC ++ G ++V+ + ++D+Y +CG +
Sbjct: 460 KEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVY 518
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
+ K+F+ + K++V+W +M+ YA GL EAL +++ MQ ++P+ + +L A
Sbjct: 519 HSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIG 578
Query: 492 HIGLVEEGWHYFNSMIR 508
+ + +G +IR
Sbjct: 579 GLSSLAKGKEVHGFLIR 595
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 195/375 (52%), Gaps = 13/375 (3%)
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS-LVFKCA 207
L C+ G L++ L S+ G + + VL A + G+Q+H+ V +
Sbjct: 31 LKQLCKEGNLRQALRL-LTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGS 89
Query: 208 LEFDK-FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
LE D F+A L+ +Y KC ++ A +F + + +W+ALIG Y G ACEA+ ++
Sbjct: 90 LEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVY 149
Query: 267 VKM---FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
M +SG+ P T + VL A + G ++H L +K G TFVAN ++ Y
Sbjct: 150 RAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMY 209
Query: 324 SKCELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
+KC +L+ +++ F+ M D DV SWN++I+G L + + +A++L + M N YT
Sbjct: 210 AKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTT 269
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+L + +++ + G++ H ++K G + N+ + LV MY KCGR++ A +VF +
Sbjct: 270 VGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDE 328
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
K+ +SWN+ML Y Q+GL EA+E S M +P+ + + SA H+ GW
Sbjct: 329 KDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHL-----GWLL 383
Query: 503 FNSMIRDHGISPRMD 517
+ + I R+D
Sbjct: 384 NGKEVHAYAIKQRLD 398
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 11/248 (4%)
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF--DSNVVIGSA 419
+A+ LL G P Y +L++ + A+ G Q H V G + + +
Sbjct: 42 QALRLLTSQT-PGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATK 100
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ---ENKI 476
L+ MY KCGR+ DAR +FD +SS+ + SWN ++ Y G EAL +Y M+ + +
Sbjct: 101 LLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGV 160
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P+ T VL A G G ++ HG+ +++ ++A G A
Sbjct: 161 APDGCTLASVLKASGVEGDGRCGCEVHGLAVK-HGLDRSTFVANALIAMYAKCGILDSAM 219
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTH----KDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
+ + W ++SGC + + L L R +LS + T + +
Sbjct: 220 RVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTEL 279
Query: 593 AEANMWDE 600
A+ N+ E
Sbjct: 280 AQLNLGRE 287
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I FH + L+ MY ++ A K+F+ + ++++ W+A+I+ G + A
Sbjct: 593 LIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQA 652
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGK---EIHGRMYRSGLELNSHVSNCL 117
++ F+ M+ + P++ +++ + AC+ GK ++ YR LE C+
Sbjct: 653 IDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYR--LEPWQEHYACV 710
Query: 118 INMYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+++ G+ G A +F+ L+ S+ W SLL +
Sbjct: 711 VDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGA 745
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/652 (31%), Positives = 355/652 (54%), Gaps = 2/652 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N ++ MY K DA+++FD + +RN SWS L+ + Q M + AL ++ MV +
Sbjct: 6 NMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKEIS 65
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
+ YT ++AC D G+ + + G E + V+ LI+++ KCG L A+ V
Sbjct: 66 IDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESV 125
Query: 134 FDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
F + R+ IS +++ +Y + G++ L + R G+ F+ A++LGAC+
Sbjct: 126 FRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDF 185
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L G IH + + + V LI +YAKC L + +F + + D+ +W+A+I
Sbjct: 186 LLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAA 245
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y G +A LF +M + G P TFS +LGA A K GR LH I GF
Sbjct: 246 YTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRD 305
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+ N ++ +++C LE + + F +++ ++ +WN ++A + +A+ L K+ML
Sbjct: 306 FAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLL 365
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EG P+ +T+S++++ + + A+ GK H C GF+ +V++G+ALV+MYAKCG L D
Sbjct: 366 EGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLAD 425
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A+K FD +S+K++VSW+ M+ AQHG EALE+ +M I N+ T VL AC H
Sbjct: 426 AKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSH 485
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
G + EG YF + +D GI ++ + L G + A + + P + + V
Sbjct: 486 GGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALV 545
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL GCK H D+ G+ ++I++ +PE+ ++++L+N+YA A WD+ AK+R+ M++K
Sbjct: 546 TLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKG 605
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF-DGGYVPD 663
+K+ TGCS E ++K++ FS + + +++ + +L + + GYVPD
Sbjct: 606 VKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPD 657
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 210/391 (53%), Gaps = 1/391 (0%)
Query: 110 NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
++ ++N +I MYGKC A+ VFD +RN+ SW L+ Y Q + L+++
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
+ ++I ++ +SVL AC L +++ G + + E D VA LI+L+AKC L+
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 230 LASRVFSNI-QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
A VF ++ + D+ + +A+IG Y + GK A+D + KM S GL P T++ +LGA
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ + G+ +H I++ V N ++ Y+KC L++S F MD DVVSWN
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
A+IA + H +A L M GH P++YT+S+IL + +E G+ H I
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITAR 300
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
GFD + + + L+ M+ +CG L AR+ F + K L +WNTML YAQ G++AL +Y
Sbjct: 301 GFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLY 360
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
M P+ TF V+ +C +G + EG
Sbjct: 361 KNMLLEGFTPDRFTFSSVVDSCASLGALREG 391
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 205/442 (46%), Gaps = 44/442 (9%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N+ N L+ MY K + D++ LF M ++V+SW+A+I+ ++ G + A + F M
Sbjct: 204 NISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMC 263
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
P+ YT+ + ACAS G+ +H R+ G + + + N LI+M+ +CG L
Sbjct: 264 TLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLE 323
Query: 129 SAQFVFDASLERNSI-SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
SA+ F S+E+ + +W ++L++Y Q + L ++ G F+ +SV+ +C
Sbjct: 324 SARRYF-YSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSC 382
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A LG L+ G IH C E D + L+N+YAKC L A + F I D+ +WS
Sbjct: 383 ASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWS 442
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A+I AQ G A EA++L M G+ +EVT S VL A + GGR + M
Sbjct: 443 AMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSH-----GGRLYEGIDYFM 497
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI--AGHLASCHYGEAIE 365
G S DF E DE + V + L+ AG L EA
Sbjct: 498 GLSQ---------DFGI-------------ERDEENTVGFIDLLGRAGWLK-----EAEH 530
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV--KPGFDSNVVIGSALVDM 423
+L M F+ L T + D + GK IV +P + V+ L +M
Sbjct: 531 VLHTMPFKVSFVALVTLLGGCKVHGD---VRRGKALTKRIVALEPENPGSYVL---LNNM 584
Query: 424 YAKCGRLNDARKVFDHLSSKNL 445
YA GR +D K+ ++ K +
Sbjct: 585 YAAAGRWDDVAKLRRYMRKKGV 606
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 108/190 (56%), Gaps = 1/190 (0%)
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
TF+AN ++ Y KC+ E++ + FD + + + SW+ L+ ++ + Y EA+E+ K+M+
Sbjct: 2 TFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVR 61
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+ + YT S++L + + +E G+ + GF+ +VV+ ++L+ ++AKCG L +
Sbjct: 62 KEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEE 121
Query: 433 ARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
A VF + + ++++S M+ Y +HG AL+ Y M+ ++P+ T+ +L AC
Sbjct: 122 AESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACS 181
Query: 492 HIGLVEEGWH 501
+ +G H
Sbjct: 182 SPDFLLDGKH 191
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 123/254 (48%), Gaps = 2/254 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ GF + N+L+ M+ + + A++ F + ++ + +W+ +++ ++Q + A
Sbjct: 297 ITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDA 356
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L ++ M+ P+ +T+ V +CAS G R GK IH G E + + L+NM
Sbjct: 357 LFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNM 416
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L+ A+ FD ++ +SW +++++ Q G L++ L G+A +E +
Sbjct: 417 YAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTA 476
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+SVL AC+ G L G+ L +E D+ +G I+L + L A V +
Sbjct: 477 SSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMP 536
Query: 240 LP-DLTAWSALIGG 252
A L+GG
Sbjct: 537 FKVSFVALVTLLGG 550
>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/677 (31%), Positives = 371/677 (54%), Gaps = 22/677 (3%)
Query: 7 HPNVITYNHLLLMYVK-------------FSRINDAQKLFDEMPERNVISWSALISGFSQ 53
+P+ I YN LL MY +SR + +K+FD M +R V++W+ LI+ + +
Sbjct: 128 NPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVR 187
Query: 54 IGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL--NS 111
A+ F +M+ ++P+ ++V A +S GD ++ +HG + + G E +
Sbjct: 188 TERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDL 247
Query: 112 HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
+V + I MY + G L A+ VFD LERN+ W +++S++ Q + G+++F + +S
Sbjct: 248 YVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVES 307
Query: 172 -GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDL 230
AI E + S + A + L ++ Q+H+ V K V LI +Y++C +D
Sbjct: 308 EDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDT 367
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
+ ++F N+ D+ +W+ +I + Q G EA+ LF +M LM VT + +L A +D
Sbjct: 368 SFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASD 427
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM--DEHDVVSWN 348
++ G+Q H +++ G F + + ++D Y+K L+E + F++ E D +WN
Sbjct: 428 LRNPDIGKQTHGYLLRNGIQ-FEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWN 486
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
++++G+ + +A +L+ ML + PN+ T ++IL + I+WGKQ H ++
Sbjct: 487 SMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRN 546
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
D NV + +AL+DMY+K G + A VF + K++V+++TM++GY QHG+G AL ++
Sbjct: 547 DLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMF 606
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
MQ++ I+P+ T + VLSAC + GLV+EG F SM + I P +H V +
Sbjct: 607 HRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGR 666
Query: 529 RGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPED--TSAH 585
G+ +AYEF+ + N + +W LL+ C+ HK LG+ A+K+L + + T H
Sbjct: 667 AGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYH 726
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLH 645
++LSN+YAE W+ VRK M+E+ LKK+TG SW E+ M++F++ Q ++
Sbjct: 727 VLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQIY 786
Query: 646 EVMNQLSVHLFDGGYVP 662
++ +L + + GY P
Sbjct: 787 SMLEELLMEMKHAGYRP 803
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/535 (28%), Positives = 256/535 (47%), Gaps = 28/535 (5%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
T +P + T + L + +++ A++LFD +P + + W+ +I G P+ AL
Sbjct: 21 THSTNPKIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALL 80
Query: 63 YFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ M ++ + YTY + ACA + GK +H R + + V N L+NM
Sbjct: 81 FYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNM 140
Query: 121 YGKC------GLLSSA-------QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLL 167
Y C G + S + VFD +R ++W +L++ Y + + +K F +
Sbjct: 141 YSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSM 200
Query: 168 SRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF--DKFVAMGLINLYAKC 225
K G+ S S +V A + LG+ K +H ++ K E+ D +V I +YA+
Sbjct: 201 MMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAEL 260
Query: 226 EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYV 284
L+ A +VF N + W+ +I + Q + E I LF + S EVT
Sbjct: 261 GCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSA 320
Query: 285 LGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDV 344
+ A + +++ QLH+ +IK + V N ++ YS+C ++ S K FD M E DV
Sbjct: 321 ISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDV 380
Query: 345 VSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCC 404
VSWN +I+ + + EA+ L +M + + T + +L+ +SD+ + GKQTH
Sbjct: 381 VSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGY 440
Query: 405 IVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGR 462
+++ G + S L+DMYAK G + A+ VF+ S ++ +WN+M+ GY Q+GL
Sbjct: 441 LLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVD 499
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
+A I M + K+ PN T +L AC G ++ G HG S R D
Sbjct: 500 QAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQL-------HGFSIRND 547
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 219/453 (48%), Gaps = 23/453 (5%)
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG---VAISEFSCA 181
G L A+ +FDA +++ W +++ C +F + KS V ++ +
Sbjct: 42 GQLHLARQLFDALPRPSTVLWNTIIIGLV-CNNFPDEALLFYSNMKSSSPQVKCDSYTYS 100
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC-------------EKL 228
SVL ACA NL VG +H+ +C + + V L+N+Y+ C +
Sbjct: 101 SVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRC 160
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
DL +VF ++ + AW+ LI Y + + EA+ F M G+ PS V+F V AF
Sbjct: 161 DLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAF 220
Query: 289 ADVKETIGGRQLHSLIIKMG--FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
+ + + +H +++K+G + + +V ++ + Y++ LE + K FD E +
Sbjct: 221 SSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEV 280
Query: 347 WNALIAGHLASCHYGEAIEL-LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
WN +I+ + + E I+L + + E + T + ++ +S + E +Q H +
Sbjct: 281 WNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFV 340
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
+K + V + +AL+ MY++C ++ + K+FD++ K++VSWNTM+ + Q+GL EAL
Sbjct: 341 IKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEAL 400
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
++ M++ + + T +LSA + + G ++R+ MD + ++ +
Sbjct: 401 MLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD--SYLIDM 458
Query: 526 FACRGQTRRAYE-FIKSSPIEPNKVVWRCLLSG 557
+A G A F KS E ++ W ++SG
Sbjct: 459 YAKSGLIEAAQNVFEKSFSHERDQATWNSMMSG 491
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I + NV L+ MY K I A+ +F + E++++++S +I G+ Q GM E AL
Sbjct: 544 IRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESAL 603
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN--CLIN 119
F M ++P+ T V +SAC+ G G +I M R+ + + C+ +
Sbjct: 604 FMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESM-RTVYNIQPSTEHFCCVAD 662
Query: 120 MYGKCGLLSSA-QFVFDASLERNSIS-WVSLLSS 151
M G+ G + A +FV + N + W SLL++
Sbjct: 663 MLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAA 696
>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/677 (31%), Positives = 371/677 (54%), Gaps = 22/677 (3%)
Query: 7 HPNVITYNHLLLMYVK-------------FSRINDAQKLFDEMPERNVISWSALISGFSQ 53
+P+ I YN LL MY +SR + +K+FD M +R V++W+ LI+ + +
Sbjct: 104 NPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVR 163
Query: 54 IGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL--NS 111
A+ F +M+ ++P+ ++V A +S GD ++ +HG + + G E +
Sbjct: 164 TERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDL 223
Query: 112 HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
+V + I MY + G L A+ VFD LERN+ W +++S++ Q + G+++F + +S
Sbjct: 224 YVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVES 283
Query: 172 -GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDL 230
AI E + S + A + L ++ Q+H+ V K V LI +Y++C +D
Sbjct: 284 EDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDT 343
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
+ ++F N+ D+ +W+ +I + Q G EA+ LF +M LM VT + +L A +D
Sbjct: 344 SFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASD 403
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM--DEHDVVSWN 348
++ G+Q H +++ G F + + ++D Y+K L+E + F++ E D +WN
Sbjct: 404 LRNPDIGKQTHGYLLRNGIQ-FEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWN 462
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
++++G+ + +A +L+ ML + PN+ T ++IL + I+WGKQ H ++
Sbjct: 463 SMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRN 522
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
D NV + +AL+DMY+K G + A VF + K++V+++TM++GY QHG+G AL ++
Sbjct: 523 DLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMF 582
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
MQ++ I+P+ T + VLSAC + GLV+EG F SM + I P +H V +
Sbjct: 583 HRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGR 642
Query: 529 RGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPED--TSAH 585
G+ +AYEF+ + N + +W LL+ C+ HK LG+ A+K+L + + T H
Sbjct: 643 AGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYH 702
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLH 645
++LSN+YAE W+ VRK M+E+ LKK+TG SW E+ M++F++ Q ++
Sbjct: 703 VLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQIY 762
Query: 646 EVMNQLSVHLFDGGYVP 662
++ +L + + GY P
Sbjct: 763 SMLEELLMEMKHAGYRP 779
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 245/509 (48%), Gaps = 28/509 (5%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV--LEPNYYTYVGAVSAC 86
A++LFD +P + + W+ +I G P+ AL ++ M ++ + YTY + AC
Sbjct: 23 ARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKAC 82
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC------GLLSSA-------QFV 133
A + GK +H R + + V N L+NMY C G + S + V
Sbjct: 83 ADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKV 142
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD +R ++W +L++ Y + + +K F + K G+ S S +V A + LG+
Sbjct: 143 FDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDF 202
Query: 194 KVGMQIHSLVFKCALEF--DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
K +H ++ K E+ D +V I +YA+ L+ A +VF N + W+ +I
Sbjct: 203 KNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMIS 262
Query: 252 GYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
+ Q + E I LF + S EVT + A + +++ QLH+ +IK
Sbjct: 263 AFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAV 322
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
+ V N ++ YS+C ++ S K FD M E DVVSWN +I+ + + EA+ L +M
Sbjct: 323 TQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEM 382
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
+ + T + +L+ +SD+ + GKQTH +++ G + S L+DMYAK G +
Sbjct: 383 KKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLI 441
Query: 431 NDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
A+ VF+ S ++ +WN+M+ GY Q+GL +A I M + K+ PN T +L
Sbjct: 442 EAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILP 501
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
AC G ++ G HG S R D
Sbjct: 502 ACNPSGYIDWGKQL-------HGFSIRND 523
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 219/453 (48%), Gaps = 23/453 (5%)
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG---VAISEFSCA 181
G L A+ +FDA +++ W +++ C +F + KS V ++ +
Sbjct: 18 GQLHLARQLFDALPRPSTVLWNTIIIGLV-CNNFPDEALLFYSNMKSSSPQVKCDSYTYS 76
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC-------------EKL 228
SVL ACA NL VG +H+ +C + + V L+N+Y+ C +
Sbjct: 77 SVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRC 136
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
DL +VF ++ + AW+ LI Y + + EA+ F M G+ PS V+F V AF
Sbjct: 137 DLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAF 196
Query: 289 ADVKETIGGRQLHSLIIKMG--FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
+ + + +H +++K+G + + +V ++ + Y++ LE + K FD E +
Sbjct: 197 SSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEV 256
Query: 347 WNALIAGHLASCHYGEAIEL-LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
WN +I+ + + E I+L + + E + T + ++ +S + E +Q H +
Sbjct: 257 WNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFV 316
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
+K + V + +AL+ MY++C ++ + K+FD++ K++VSWNTM+ + Q+GL EAL
Sbjct: 317 IKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEAL 376
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
++ M++ + + T +LSA + + G ++R+ MD + ++ +
Sbjct: 377 MLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD--SYLIDM 434
Query: 526 FACRGQTRRAYE-FIKSSPIEPNKVVWRCLLSG 557
+A G A F KS E ++ W ++SG
Sbjct: 435 YAKSGLIEAAQNVFEKSFSHERDQATWNSMMSG 467
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I + NV L+ MY K I A+ +F + E++++++S +I G+ Q GM E AL
Sbjct: 520 IRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESAL 579
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN--CLIN 119
F M ++P+ T V +SAC+ G G +I M R+ + + C+ +
Sbjct: 580 FMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESM-RTVYNIQPSTEHFCCVAD 638
Query: 120 MYGKCGLLSSA-QFVFDASLERNSIS-WVSLLSS 151
M G+ G + A +FV + N + W SLL++
Sbjct: 639 MLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAA 672
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/621 (31%), Positives = 351/621 (56%), Gaps = 4/621 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G +V ++ +Y K ++ A K F MP RNV+SW+ +ISGF Q A
Sbjct: 274 VIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISA 333
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++F+ M + N YT ++AC + ++H ++++G L+S+VS+ LINM
Sbjct: 334 FHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINM 393
Query: 121 YGKCGLLSSAQFVF-DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y K G++ ++ VF + +N W ++S++ Q G +++F + G+ +F
Sbjct: 394 YSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFC 453
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+SVL +++ +L +G IH + K L D V L +Y+KC L+ + VF +
Sbjct: 454 SSSVL---SIIDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMP 510
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D +W+++I G+++ A +A+ LF +M + P ++T + L A + + G++
Sbjct: 511 DKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKE 570
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H ++ V +++ YSKC + + + FD + + D S ++L++G+ + +
Sbjct: 571 VHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGY 630
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A+ L ++ + +T S+++ + + +++ G Q H C+ K G ++ V +GS+
Sbjct: 631 IEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSS 690
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LV MY+KCG +++ KVF+ + +L+SW M+V YAQHG G EAL++Y +M++ KP+
Sbjct: 691 LVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPD 750
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+GVLSAC H G+VEEG+ + NSM +++GI P H A +V L G+ + A FI
Sbjct: 751 SVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFI 810
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ PIEP+ ++W LL+ CK H D+ LGR AA++++ +P + A++ LSN+ A+ W+
Sbjct: 811 NNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWE 870
Query: 600 ETAKVRKIMKEKSLKKDTGCS 620
+ K+R +M+ +KK+ G S
Sbjct: 871 DVMKIRSLMEGTGVKKEPGWS 891
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 161/564 (28%), Positives = 289/564 (51%), Gaps = 12/564 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF N ++ ++ K DA ++F ++ NV+ W+A+ISG + VAL
Sbjct: 174 LKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVAL 233
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F M C PN +T+ ++ACA+ + G+ + G + + G + V +I++Y
Sbjct: 234 DLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLY 293
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + A F RN +SW +++S + Q + + F RK G I+ ++
Sbjct: 294 AKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTIT 353
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-L 240
SVL AC +K +Q+HS +FK D V+ LIN+Y+K +DL+ RVF ++
Sbjct: 354 SVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMEST 413
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L W+ +I +AQ G A++LF +M GL P + S VL + GR +
Sbjct: 414 KNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSL---GRLI 470
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H I+K+G + V +++ YSKC LEES F++M + D VSW ++I G H
Sbjct: 471 HCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHA 530
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A++L ++ML E P+ T + L S + ++E GK+ H ++ V++G AL
Sbjct: 531 EQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGAL 590
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V+MY+KCG + AR+VFD L K+ S ++++ GYAQ+G +AL ++ ++ + +
Sbjct: 591 VNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDS 650
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG---QTRRAYE 537
T V+ A + ++ G ++ + G++ + +S+V +++ G + + +E
Sbjct: 651 FTVSSVIGAVAILNSLDIGTQ-LHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFE 709
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTH 561
I+ +P+ + W ++ H
Sbjct: 710 QIE----KPDLISWTAMIVSYAQH 729
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/501 (30%), Positives = 261/501 (52%), Gaps = 10/501 (1%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
T+ N N L+ Y K + + A +LFD+ P NVISW+ LISG +Q E +
Sbjct: 74 TAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWR 133
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F M +PN +TY +SAC + G G+ ++ ++G N +V +I+++
Sbjct: 134 NFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFA 193
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
K A VF L N + W +++S + E+ L +F + F+ +S
Sbjct: 194 KLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSS 253
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L ACA L L+ G + V KC D FV +I+LYAKC +D A + F + + +
Sbjct: 254 ILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRN 313
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD---VKETIGGRQ 299
+ +W+ +I G+ Q + A F +M G + T + VL A + +KE + Q
Sbjct: 314 VVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAV---Q 370
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSWNALIAGHLASC 358
LHS I K GF + V++ +++ YSK +++ S + F EM+ ++ W +I+ S
Sbjct: 371 LHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSG 430
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
G A+EL + ML EG P+ + S++L+I I ++ G+ HC I+K G +++ +GS
Sbjct: 431 STGRAVELFQRMLQEGLRPDKFCSSSVLSI---IDSLSLGRLIHCYILKIGLFTDISVGS 487
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+L MY+KCG L ++ VF+ + K+ VSW +M+ G+++H +A++++ M +I+P
Sbjct: 488 SLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRP 547
Query: 479 NDNTFIGVLSACVHIGLVEEG 499
+ T L+AC + +E+G
Sbjct: 548 DQMTLTAALTACSALHSLEKG 568
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 235/479 (49%), Gaps = 11/479 (2%)
Query: 87 ASRGDARSGKEIHGRMYRSG-LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
+ R R+ K +H ++ L+ N+ ++N L+ Y K + A +FD + N ISW
Sbjct: 56 SGRCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISW 115
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
L+S Q + F R SG ++F+ SVL AC LG+ G ++SL K
Sbjct: 116 NILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALK 175
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
+ +V G+I+L+AK + A RVF ++ ++ W+A+I G + + A+DL
Sbjct: 176 NGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDL 235
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F +M MP+ TFS +L A A ++E GR + +IK G FV ++D Y+K
Sbjct: 236 FCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAK 295
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C +++++K F M +VVSW +I+G + A K+M G N YT +++
Sbjct: 296 CRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSV 355
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGF--DSNVVIGSALVDMYAKCGRLNDARKVFDHL-SS 442
L ++ I+ Q H I K GF DSNV SAL++MY+K G ++ + +VF + S+
Sbjct: 356 LTACTEPVMIKEAVQLHSWIFKTGFYLDSNV--SSALINMYSKIGVVDLSERVFREMEST 413
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
KNL W M+ +AQ G A+E++ M + ++P+ VLS + L
Sbjct: 414 KNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSL----GRL 469
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ I G+ + +S+ +++ G +Y + P + N V W +++G H
Sbjct: 470 IHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDN-VSWASMITGFSEH 527
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/673 (31%), Positives = 365/673 (54%), Gaps = 9/673 (1%)
Query: 4 SGFHPNVITYNHLLLMYVK---FSRIND-----AQKLFDEMPERNVISWSALISGFSQIG 55
SG P+ ++ +L+ K F R + A KLF + +V W+ +S + Q G
Sbjct: 217 SGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAG 276
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
A++ FR M+ + + TY+ +S AS GK+IHG + R G + V+N
Sbjct: 277 EGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVAN 336
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
INMY K G ++ A+ +F E + ISW +++S + G L++F+ +SG+
Sbjct: 337 SAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLP 396
Query: 176 SEFSCASVLGACAVLG-NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+F+ SVL AC+ L + VG Q+H+ K + D FV+ LI++Y+K K++ A +
Sbjct: 397 DQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELL 456
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F N DL +W+A++ G+ EA+ LF M G ++TF+ A +
Sbjct: 457 FHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRL 516
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G+Q+H+++IKM F FV + +LD Y KC ++ + K F+++ D V+W +I+G
Sbjct: 517 QQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGC 576
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ + +A+ M G P+ YT++ ++ S + A+E GKQ H I+K +
Sbjct: 577 VENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDP 636
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ ++LVDMYAKCG + DA +F ++++++ WN M+VG AQHG EAL ++ M+
Sbjct: 637 FVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSR 696
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
+ P+ TFIGVLSAC H GL + + F+SM + +G+ P ++H + +V + G +
Sbjct: 697 GVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQE 756
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
A + + S P E + ++R LL+ C+ D G AEK+ + DP D++A+++LSN+YA
Sbjct: 757 AEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAA 816
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
AN W+ R +MK ++KK+ G SW +++NK+H F + + ++ + +
Sbjct: 817 ANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKR 876
Query: 655 LFDGGYVPDPIYS 667
+ + GYVPD ++
Sbjct: 877 IKEEGYVPDTEFA 889
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 146/598 (24%), Positives = 280/598 (46%), Gaps = 52/598 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIG--- 55
++TSG +P+ N+L+ MY K + A+KLFD P+ R++++++A+++ ++ G
Sbjct: 39 IVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELH 98
Query: 56 ---MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH 112
A + FRL+ V+ +T C G + + + G + GL+ +
Sbjct: 99 DVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVF 158
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
V+ L+N+Y K + A+ +FD R+ + W ++ +Y + G L +F +SG
Sbjct: 159 VAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSG 218
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+ S ++L + VG + VF+ LE + Y A+
Sbjct: 219 LRPDCVSVRTIL--------MGVGKKT---VFERELE--------QVRAY--------AT 251
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
++F D+T W+ + Y Q G+ EA+D F M S + +T+ +L A +
Sbjct: 252 KLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLN 311
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
G+Q+H +++ G+ F VAN+ ++ Y K + + + F +M E D++SWN +I+
Sbjct: 312 HLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVIS 371
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI-PAIEWGKQTHCCIVKPGFD 411
G S ++ L D+L G P+ +T +++L S + + G+Q H C +K G
Sbjct: 372 GCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIV 431
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+ + +AL+D+Y+K G++ +A +F + +L SWN M+ G+ REAL ++S+M
Sbjct: 432 LDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLM 491
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH------IASVVHL 525
E K + TF A + +++G H + +M I+ ++ +
Sbjct: 492 HERGEKADQITFANAAKAAGCLVRLQQGKQI-------HAVVIKMRFHYDLFVISGILDM 544
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPED 581
+ G+ + A + P P+ V W ++SGC ++ L Y ++ P++
Sbjct: 545 YLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDE 601
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 206/405 (50%), Gaps = 37/405 (9%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE--RNSISWVSLLSSY 152
GK H + SGL + +V+N LI MY KCG L SA+ +FD + + R+ +++ ++L++Y
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 153 CQCGEHVHGLK-------IFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
GE +H ++ IF L R+S + + + + + C + G+ + K
Sbjct: 92 AHTGE-LHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVK 150
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
L++D FVA L+N+YAK +++ A +F + + D+ W+ ++ Y ++G E + L
Sbjct: 151 IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGL 210
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F SGL P V+ +L K+T+ R+L + +++ FV +
Sbjct: 211 FSAFHRSGLRPDCVSVRTILMGVG--KKTVFERELEQV---RAYATKLFVCD-------- 257
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
D+ DV WN ++ +L + EA++ +DM+ + TY I
Sbjct: 258 --------------DDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVI 303
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L++ + + +E GKQ H +V+ G+D V + ++ ++MY K G +N AR++F + +L
Sbjct: 304 LSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDL 363
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+SWNT++ G A+ GL +L ++ + + + P+ T VL AC
Sbjct: 364 ISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRAC 408
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 167/405 (41%), Gaps = 45/405 (11%)
Query: 167 LSRKSGVAISEF--SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK 224
+SRK V+ S S+L +L +G + H+++ L D++V LI +YAK
Sbjct: 1 MSRKCSVSPSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAK 60
Query: 225 CEKLDLASRVFSNIQLP--DLTAWSALIGGYAQLG------KACEAIDLFVKMFSSGLMP 276
C L A ++F DL ++A++ YA G K EA +F + S ++
Sbjct: 61 CGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLT 120
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
+ T S + L +K+G FVA +++ Y+K + + E+ F
Sbjct: 121 TRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLF 180
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
D M DVV WN ++ ++ E + L G P+ + IL +
Sbjct: 181 DRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL--------MG 232
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
GK+T V L + A A K+F ++ WN L Y
Sbjct: 233 VGKKT-------------VFERELEQVRAY------ATKLFVCDDDSDVTVWNKTLSSYL 273
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
Q G G EA++ + M ++++ + T+I +LS + +E G +++R G +
Sbjct: 274 QAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVR-FGWDQFV 332
Query: 517 DHIASVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRCLLSGC 558
S ++++ G RR + +K E + + W ++SGC
Sbjct: 333 SVANSAINMYVKAGSVNYARRMFGQMK----EVDLISWNTVISGC 373
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I FH ++ + +L MY+K + A+K+F+++P + ++W+ +ISG + G E A
Sbjct: 526 VIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQA 585
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L + M ++P+ YT+ V AC+ GK+IH + + + V L++M
Sbjct: 586 LFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDM 645
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A +F R+ W +++ Q G L F + GV +
Sbjct: 646 YAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTF 705
Query: 181 ASVLGACA 188
VL AC+
Sbjct: 706 IGVLSACS 713
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/654 (32%), Positives = 344/654 (52%), Gaps = 8/654 (1%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
T+ + PN+ N L +K +I +A+ +F++M R+ ISW+ LI+G+ AL
Sbjct: 77 TAYYVPNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALI 136
Query: 63 YFRLM-VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M V L+ + + A+ ACA + G+ +HG +SGL + VS+ L++MY
Sbjct: 137 LFSNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMY 196
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G VF+ RN +SW +++ G + GL F +S V + A
Sbjct: 197 MKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFA 256
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
L A A G L G IH+ K +V L +Y+KC K D R+F + P
Sbjct: 257 VALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTP 316
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W+ LI Y Q+G A+D F +M S + P+E TF+ V+ A A++ T G Q+H
Sbjct: 317 DVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIH 376
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+++G V+N+++ YSKC LL+E+ FD M D++SW+ +I+ + H
Sbjct: 377 GHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAK 436
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA L M EG PN + +++L++ + +E GKQ H + G D ++ SAL+
Sbjct: 437 EAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALI 496
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
MY++ G L +A K+FD + + ++VSW M+ GYA+HG +EA+ ++ + + P+
Sbjct: 497 SMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYV 556
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TFIG+L+AC H GLV+ G++Y+ M ++ I+P +H ++ L G+ A +++
Sbjct: 557 TFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRN 616
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P + VVW LL C+ H DL +AAE++L P AHI L+N+Y+ + +E
Sbjct: 617 MPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEA 676
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
A VRK+MK K + K+ G SW ++++ F G+ H + Q++ L
Sbjct: 677 AHVRKLMKSKGVIKEPGWSWINSNDQLNTF-------VAGVQSHPLSKQITTIL 723
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/528 (28%), Positives = 245/528 (46%), Gaps = 30/528 (5%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG +V + L+ MY+K + +F+ M RNV+SW+A+I G G L
Sbjct: 178 VKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGL 237
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+YF M + + +T+ A+ A A G GK IH + + G ++V N L MY
Sbjct: 238 SYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMY 297
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC +F + +SW +L+ +Y Q G+ L F RKS V+ +E++ A
Sbjct: 298 SKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFA 357
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SV+ ACA L K G QIH + L V+ +I LY+KC L AS VF +
Sbjct: 358 SVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRK 417
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +WS +I Y Q A EA + M G P+E + VL + G+Q+H
Sbjct: 418 DIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVH 477
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ + +G T V + ++ YS+ L+E+ K FD + +D+VSW A+I G+ +
Sbjct: 478 AYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQ 537
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVVI 416
EAI L +++ G P+ T+ IL + ++ G T+ + P +
Sbjct: 538 EAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHY--- 594
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
++D+ + GRL++A + ++ + V W+T+L HG A I++ Q +
Sbjct: 595 -GCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRA--IWAAEQMLR 651
Query: 476 IKPNDN----TFIGVLSA------CVHI-------GLVEE-GWHYFNS 505
+ PN T + SA H+ G+++E GW + NS
Sbjct: 652 LHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINS 699
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 225/691 (32%), Positives = 363/691 (52%), Gaps = 38/691 (5%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P N LL Y + + A LFD MP R+ +++++LI+ AL+ R M
Sbjct: 92 PTPAVSNALLTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDM 151
Query: 68 VCCVLEPNYYTYVGAVSACASRG-DARSGKEIHGRMYRSG-LELNSHVS-NCLINMYGKC 124
+ +T V + AC+ D R G+E H ++G L+ + + N L++MY +
Sbjct: 152 LLEGHPLTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARL 211
Query: 125 GLLSSAQFVFDASLERNS-----ISW---VSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
GL+ AQ +F + + ++W VSLL +CGE + L + GV
Sbjct: 212 GLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMV---ARGVRPD 268
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ AS L AC+ L L +G ++H+ V K A L + FVA L+++YA E++ A VF
Sbjct: 269 GVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVF 328
Query: 236 SNIQLPD--LTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVK 292
+ + L W+A+I GYAQ G +A++LF +M + +G++PSE T + VL + A +
Sbjct: 329 DMVPAGERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSE 388
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
G +H ++K G + FV N ++D Y++ ++ + F ++ DVVSWN LI
Sbjct: 389 TFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLIT 448
Query: 353 GHLASCHYGEAIELLKDMLFEGH------------------CPNLYTYSNILNISSDIPA 394
G + H +A +L+++M +G PN T +L + + A
Sbjct: 449 GCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAA 508
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
GK+ H V+ DS+V +GSALVDMYAKCG L +R VFD L +N+++WN +++
Sbjct: 509 PARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMA 568
Query: 455 YAQHGLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
Y HGLG EA+ ++ M+ ++ KPN+ TFI L+AC H G+V+ G F SM R+HG+
Sbjct: 569 YGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVE 628
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKS-SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
P D A V + G+ AY I S P E W L C+ H+++ LG AAE
Sbjct: 629 PTPDLHACAVDILGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAE 688
Query: 573 KILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
++ +P++ S +++L N+Y+ A +W+++++VR M+++ + K+ GCSW EL +H F
Sbjct: 689 RLFELEPDEASHYVLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWIELDGVIHRFM 748
Query: 633 TSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
A + +H M+ L + D GY PD
Sbjct: 749 AGESAHPESTLVHAHMDALWERMRDQGYTPD 779
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 231/764 (30%), Positives = 379/764 (49%), Gaps = 108/764 (14%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +GF + LL MY + + DA LF+ MP RN+ SW A++S + G+ E A
Sbjct: 86 IKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAF 145
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+++ +E +++ + AC+ G G+++HG + + LN +VSN LI+MY
Sbjct: 146 LLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMY 205
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSS------------------------------ 151
GKCG L A+ V ER+S++W S++++
Sbjct: 206 GKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSW 265
Query: 152 ------YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+ Q G +++ + G+ + + A VL ACA L L +G Q+H + +
Sbjct: 266 SAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITR 325
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
+ V L+++Y +C + A+++F + ++ + + +I GY + G +A +L
Sbjct: 326 HDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKEL 385
Query: 266 F-------------------------------VKMFSSGLM-----PSEVTFSYVLGAFA 289
F MF + LM P T VL A A
Sbjct: 386 FDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACA 445
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
D G+++H+ I G S TFV +++ YSKC+ L + FDE+ E DV +WNA
Sbjct: 446 DTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNA 505
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL----------------------N 387
LI+G+ S LL+ M +G+ PN+YT+++IL
Sbjct: 506 LISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISK 565
Query: 388 ISSDI-------PA------IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
+ DI PA +E GKQ H +K G+D++V IG+ALVDMYAKCG L A+
Sbjct: 566 LRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQ 625
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+D +S+ NLVS N ML A HG G E + ++ M P+ TF+ VLS+CVH+G
Sbjct: 626 LAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVG 685
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
VE G +F+ ++ + + P + H S+V L + GQ AYE IK P+E + V+W L
Sbjct: 686 SVETGCEFFD-LMGYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGAL 744
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
L GC TH ++ LG AAE+++ +P ++ +++L+N++A A W + A+VR +MK++ +
Sbjct: 745 LGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDLARVRGMMKDRGMH 804
Query: 615 KDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
K GCSW E +N++H F + + +++ ++ L++H+ G
Sbjct: 805 KSPGCSWIEDKNEIHSFLACDRSHKRAEEIYATLDYLALHMKTG 848
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 161/601 (26%), Positives = 269/601 (44%), Gaps = 126/601 (20%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
N Y + +C + GK++H ++G + + + L+ MY +CGLL A F+F
Sbjct: 61 NTSKYASVLDSCKC---PKLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLF 117
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
+ RN SW ++LS Y G +F + + GV + F V AC+ LG+++
Sbjct: 118 ETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVE 177
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI---------------- 238
+G Q+H LV K + +V+ LI++Y KC LD A +V +
Sbjct: 178 LGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACA 237
Query: 239 --------------------QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE 278
+P++ +WSA+IGG+AQ G EAI++ +M GL+P+
Sbjct: 238 ANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNA 297
Query: 279 VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE--------LLE 330
T + VL A A ++ G+QLH I + F S V N ++D Y +C L+
Sbjct: 298 QTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLK 357
Query: 331 ESLKT-----------------------FDEMD----EHDVVSWNALIAGHLASCHYGEA 363
S+K FD MD E ++SWN++I+G++ + + EA
Sbjct: 358 FSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEA 417
Query: 364 IELLKDMLF-EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
+ ++ML EG P+ +T ++L +D ++ GK+ H + G S+ +G ALV+
Sbjct: 418 FSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVE 477
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH------------------------ 458
MY+KC L A+ FD + K++ +WN ++ GY +
Sbjct: 478 MYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYT 537
Query: 459 ------GL--GRE---ALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
GL R+ ++++S MQ +K++P+ T +L AC + +E G
Sbjct: 538 WNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERG-----KQA 592
Query: 508 RDHGISPRMD---HI-ASVVHLFACRGQTRR---AYEFIKSSPIEPNKVVWRCLLSGCKT 560
H I D HI A++V ++A G + AY+ I + PN V +L+ C
Sbjct: 593 HAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISN----PNLVSHNAMLTACAM 648
Query: 561 H 561
H
Sbjct: 649 H 649
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/576 (33%), Positives = 323/576 (56%), Gaps = 3/576 (0%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
K+IH R+ GL+ + + LI+ G ++ A+ VFD W +++ Y +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
L ++ + + V+ F+ +L AC+ L +L++G +H+ VF+ + D FV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLT--AWSALIGGYAQLGKACEAIDLFVKMFSSG 273
GLI LYAKC +L A VF + LP+ T +W+A++ YAQ G+ EA+++F M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ P V VL AF +++ GR +H+ ++KMG + ++ Y+KC + +
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
FD+M +++ WNA+I+G+ + + EAI++ +M+ + P+ + ++ ++ + +
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
++E + + + + + +V I SAL+DM+AKCG + AR VFD +++V W+ M+V
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
GY HG REA+ +Y M+ + PND TF+G+L AC H G+V EGW +FN M DH I+
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMA-DHKIN 456
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEK 573
P+ H A V+ L G +AYE IK P++P VW LLS CK H+ + LG YAA++
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 574 ILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
+ S DP +T ++ LSN+YA A +WD A+VR MKEK L KD GCSW E++ ++ F
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576
Query: 634 SRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ + ++ + + L +GG+V + S H
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLH 612
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 222/439 (50%), Gaps = 3/439 (0%)
Query: 23 FSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGA 82
F I A+++FD++P + W+A+I G+S+ + AL + M + P+ +T+
Sbjct: 66 FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHL 125
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA--SLER 140
+ AC+ + G+ +H +++R G + + V N LI +Y KC L SA+ VF+ ER
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
+SW +++S+Y Q GE + L+IF RK V + SVL A L +LK G IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
+ V K LE + + + L +YAKC ++ A +F ++ P+L W+A+I GYA+ G A
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
EAID+F +M + + P ++ + + A A V R ++ + + + F+++ ++
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
D ++KC +E + FD + DVV W+A+I G+ EAI L + M G PN
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T+ +L + + G + + + ++D+ + G L+ A +V +
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Query: 441 SSKNLVS-WNTMLVGYAQH 458
+ V+ W +L +H
Sbjct: 486 PVQPGVTVWGALLSACKKH 504
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 183/376 (48%), Gaps = 29/376 (7%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFD--EMPERNVISWSALISGFSQIGMPEVALN 62
GF +V N L+ +Y K R+ A+ +F+ +PER ++SW+A++S ++Q G P AL
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F M ++P++ V ++A D + G+ IH + + GLE+ + L MY
Sbjct: 209 IFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG +++A+ +FD N I W +++S Y + G + +F V S S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+ ACA +G+L+ ++ V + D F++ LI+++AKC ++ A VF D
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRD 388
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ WSA+I GY G+A EAI L+ M G+ P++VTF +L A HS
Sbjct: 389 VVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACN-----------HS 437
Query: 303 LIIKMGFSSFTFVAN-----------TVLDFYSKCELLEESLKTFDEMD-EHDVVSWNAL 350
+++ G+ F +A+ V+D + L+++ + M + V W AL
Sbjct: 438 GMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 351 IAGHLASCHYGEAIEL 366
L++C +EL
Sbjct: 498 ----LSACKKHRHVEL 509
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S + +V + L+ M+ K + A+ +FD +R+V+ WSA+I G+ G A++
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+R M + PN T++G + AC G R G M + C+I++ G+
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGR 471
Query: 124 CGLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVH 160
G L A V + ++ W +LLS+ C +H H
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSA---CKKHRH 506
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/657 (31%), Positives = 346/657 (52%), Gaps = 12/657 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSR--INDAQKLFDEMPERNVISWSALISGFSQIGMPEV 59
I G ++ N++L Y + S + A LFDEM R+ ++W+ +ISG+ G
Sbjct: 26 IKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGS 85
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVS--ACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
A ++ M L P+ YT+ + ACA R D G+++H + + G E + + + L
Sbjct: 86 AWELYKSMKSFGLMPDAYTFGSILKGVACACRLDV--GQQVHSLIVKMGYEEHVYAGSAL 143
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
++MY KC + A VF RNS+SW +L++ + G+H + + GV + +
Sbjct: 144 LDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDD 203
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ + +L K+ MQ+H + K ++FD V I Y++C L+ A RVF
Sbjct: 204 GTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDG 263
Query: 238 -IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ DL W++++ + + A LF+ M G P T++ ++ A
Sbjct: 264 AVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISA---CSHKDN 320
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFY--SKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G+ LH L+IK G + N V+ Y S +E++L F M+ D VSWN+++ G
Sbjct: 321 GKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGF 380
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ H A++L M F + Y +S +L SD+ ++ G+Q H VK GF+SN
Sbjct: 381 SQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESND 440
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ S+L+ MY+KCG + DARK F+ + + ++WN+++ YAQHG G AL ++ M++
Sbjct: 441 FVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDK 500
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
K+K + TF+ L+AC HIGLVE+G + SM D+GISPRM+H A V LF G
Sbjct: 501 KVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDE 560
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
A I+S P +P+ +VW+ LL C+ D+ L A +L +PE+ +++LSN+Y
Sbjct: 561 AKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHCTYVILSNMYGH 620
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
WDE A + ++M+E+ +KK G SW E++N++H F ++++++ QL
Sbjct: 621 LKRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRCHSHFEEIYQILEQL 677
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 229/457 (50%), Gaps = 8/457 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ +V + LL MY K R+ DA +F +P RN +SW+ALI+GF G + A
Sbjct: 128 IVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTA 187
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
R M + + T+ ++ + + ++H ++ + G++ ++ V N I
Sbjct: 188 FWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITS 247
Query: 121 YGKCGLLSSAQFVFDASL-ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y +CG L A+ VFD ++ R+ ++W S+L+++ K+FL ++ G ++
Sbjct: 248 YSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYT 307
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY--AKCEKLDLASRVFSN 237
+++ AC+ N G +H LV K LE + +I +Y + ++ A VF +
Sbjct: 308 YTTIISACSHKDN---GKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHS 364
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
++ D +W++++ G++Q G + A+ LFV M + + FS VL + +D+ G
Sbjct: 365 MESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLG 424
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+Q+H L +K GF S FVA++++ YSKC ++E++ K+F++ + ++WN+++ +
Sbjct: 425 QQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQH 484
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVI 416
A+ L M + + T+ L S I +E G+ + G +
Sbjct: 485 GQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEH 544
Query: 417 GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
+ VD++ + G L++A+ + + + + + W T+L
Sbjct: 545 YACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLL 581
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCEL--LEESLKTFDEMDEHDVVSWNALIAGHLASC 358
H IK+G S+ + N +L Y++C L + FDEM D V+WN +I+G++ S
Sbjct: 22 HCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSG 81
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
G A EL K M G P+ YT+ +IL + ++ G+Q H IVK G++ +V GS
Sbjct: 82 SLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGS 141
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAKC R+ DA VF + +N VSWN ++ G+ G A + M+E ++
Sbjct: 142 ALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRL 201
Query: 479 NDNTFIGVLS 488
+D TF +L+
Sbjct: 202 DDGTFSPLLT 211
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKC--GRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
THC +K G +++ + ++ Y +C G L A +FD +S ++ V+WNTM+ GY
Sbjct: 21 THCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNS 80
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
G A E+Y M+ + P+ TF +L ++ G +S+I G +
Sbjct: 81 GSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVG-QQVHSLIVKMGYEEHVYA 139
Query: 519 IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++++ ++A + R A+ K P N V W L++G
Sbjct: 140 GSALLDMYAKCERVRDAFMVFKCIP-RRNSVSWNALIAG 177
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 279/482 (57%), Gaps = 1/482 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
++L C V L G +H+ + + D + L+N+YAKC L+ A +VF +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D W+ LI GY+Q + C+A+ F +M G P+E T S V+ A A + G QLH
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+K GF S V + +LD Y++ L++++ FD ++ + VSWNALIAGH
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A+EL + ML +G P+ ++Y+++ S +E GK H ++K G G+ L+
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAK G ++DARK+FD L+ +++VSWN++L YAQHG G+EA+ + M+ I+PN+
Sbjct: 305 DMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
+F+ VL+AC H GL++EGWHY+ M +D GI P H +VV L G RA FI+
Sbjct: 365 SFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
PIEP +W+ LL+ C+ HK+ LG YAAE + DP+D H++L N+YA W++
Sbjct: 424 MPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDA 483
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A+VRK MKE +KK+ CSW E++N +H F + Q ++ ++ + + GYV
Sbjct: 484 ARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYV 543
Query: 662 PD 663
PD
Sbjct: 544 PD 545
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 211/437 (48%), Gaps = 37/437 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S F +++ N LL MY K + +A+K+F++MP+R+ ++W+ LISG+SQ P A
Sbjct: 86 ILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDA 145
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F M+ PN +T + A A+ G ++HG + G + N HV + L+++
Sbjct: 146 LLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDL 205
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + GL+ AQ VFDA RN +SW +L++ + + L++F + G S FS
Sbjct: 206 YTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSY 265
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+ GAC+ G L+ G +H+ + K + F L+++YAK + A ++F +
Sbjct: 266 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK 325
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W++L+ YAQ G EA+ F +M G+ P+E++F VL A + G
Sbjct: 326 RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 385
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCH 359
+ L+ K G + TV+D + L +L+ +EM E W AL L +C
Sbjct: 386 YELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKAL----LNACR 441
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+ EL Y ++ + D P +V+
Sbjct: 442 MHKNTEL-----------GAYAAEHVFELDPDDPG-----------------PHVI---- 469
Query: 420 LVDMYAKCGRLNDARKV 436
L ++YA GR NDA +V
Sbjct: 470 LYNIYASGGRWNDAARV 486
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 185/388 (47%), Gaps = 3/388 (0%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
G+ +H + +S + + N L+NMY KCG L A+ VF+ +R+ ++W +L+S Y
Sbjct: 78 QGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
Q L F + G + +EF+ +SV+ A A G Q+H KC + +
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
V L++LY + +D A VF ++ + +W+ALI G+A+ +A++LF M G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
PS +++ + GA + G+ +H+ +IK G F NT+LD Y+K + ++
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
K FD + + DVVSWN+L+ + EA+ ++M G PN ++ ++L S
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTML 452
++ G + + K G +VD+ + G LN A + + + + + W +L
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPND 480
H L Y+ ++ P+D
Sbjct: 438 NACRMH--KNTELGAYAAEHVFELDPDD 463
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y+ +L + + G+ H I++ F ++V+G+ L++MYAKCG L +ARKVF+ +
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
++ V+W T++ GY+QH +AL ++ M PN+ T V+ A
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 279/482 (57%), Gaps = 1/482 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
++L C V L G +H+ + + D + L+N+YAKC L+ A +VF +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D W+ LI GY+Q + C+A+ F +M G P+E T S V+ A A + G QLH
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+K GF S V + +LD Y++ L++++ FD ++ + VSWNALIAGH
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A+EL + ML +G P+ ++Y+++ S +E GK H ++K G G+ L+
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAK G ++DARK+FD L+ +++VSWN++L YAQHG G+EA+ + M+ I+PN+
Sbjct: 305 DMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
+F+ VL+AC H GL++EGWHY+ M +D GI P H +VV L G RA FI+
Sbjct: 365 SFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
PIEP +W+ LL+ C+ HK+ LG YAAE + DP+D H++L N+YA W++
Sbjct: 424 MPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDA 483
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A+VRK MKE +KK+ CSW E++N +H F + Q ++ ++ + + GYV
Sbjct: 484 ARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYV 543
Query: 662 PD 663
PD
Sbjct: 544 PD 545
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 211/437 (48%), Gaps = 37/437 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S F +++ N LL MY K + +A+K+F++MP+R+ ++W+ LISG+SQ P A
Sbjct: 86 ILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDA 145
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F M+ PN +T + A A+ G ++HG + G + N HV + L+++
Sbjct: 146 LLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDL 205
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + GL+ AQ VFDA RN +SW +L++ + + L++F + G S FS
Sbjct: 206 YTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSY 265
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+ GAC+ G L+ G +H+ + K + F L+++YAK + A ++F +
Sbjct: 266 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK 325
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W++L+ YAQ G EA+ F +M G+ P+E++F VL A + G
Sbjct: 326 RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 385
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCH 359
+ L+ K G + TV+D + L +L+ +EM E W AL L +C
Sbjct: 386 YELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKAL----LNACR 441
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+ EL Y ++ + D P +V+
Sbjct: 442 MHKNTEL-----------GAYAAEHVFELDPDDPG-----------------PHVI---- 469
Query: 420 LVDMYAKCGRLNDARKV 436
L ++YA GR NDA +V
Sbjct: 470 LYNIYASGGRWNDAARV 486
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 185/388 (47%), Gaps = 3/388 (0%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
G+ +H + +S + + N L+NMY KCG L A+ VF+ +R+ ++W +L+S Y
Sbjct: 78 QGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
Q L F + G + +EF+ +SV+ A A G Q+H KC + +
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
V L++LY + +D A VF ++ + +W+ALI G+A+ +A++LF M G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
PS +++ + GA + G+ +H+ +IK G F NT+LD Y+K + ++
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
K FD + + DVVSWN+L+ + EA+ ++M G PN ++ ++L S
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTML 452
++ G + + K G +VD+ + G LN A + + + + + W +L
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPND 480
H L Y+ ++ P+D
Sbjct: 438 NACRMH--KNTELGAYAAEHVFELDPDD 463
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y+ +L + + G+ H I++ F ++V+G+ L++MYAKCG L +ARKVF+ +
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
++ V+W T++ GY+QH +AL ++ M PN+ T V+ A
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 316/551 (57%), Gaps = 10/551 (1%)
Query: 120 MYGKCGLLSSAQFVF-DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY KC ++ A +F D + E N ++ +++S + G G + + R GV +F
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ + AC + +K +IH L+FK LE D F+ L+N Y K ++ A F +
Sbjct: 61 TFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 117
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ D+ W+A++ GYAQ+G+ ++ F +M ++PS T + +L FA + + GR
Sbjct: 118 PIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGR 177
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H +KMG+ S V+N+++D Y KC+ +E++L+ F+ M E D+ SWN++ + H
Sbjct: 178 IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCG 237
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD------S 412
+ + LL ML G P+L T + +L S + A+ G++ H ++ G
Sbjct: 238 DHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID 297
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+V++ +A++DMYAKCG + DA VF+ + +K++ SWN M++GY HG G EALE++S M
Sbjct: 298 DVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMC 357
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
E ++KP++ TF+GVLSAC H G V +G ++ M + ++P ++H V+ + GQ
Sbjct: 358 EVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQL 417
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
AYE + PIE N VVWR LL+ C+ HK VL AA+++ +PE +++++SNVY
Sbjct: 418 DEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVY 477
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
++E +VR M++++++K GCSW EL+N +H F ++ A + ++ +N L+
Sbjct: 478 GAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLNSLT 537
Query: 653 VHLFDGGYVPD 663
L + GYVPD
Sbjct: 538 ARLCEHGYVPD 548
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 220/450 (48%), Gaps = 14/450 (3%)
Query: 19 MYVKFSRINDAQKLF-DEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYY 77
MY K +++N A +F D E NV +++A+ISGF G PE +++ M + P+ +
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T+ A+ AC D K+IHG +++ GLEL+ + + L+N Y K GL+ AQ F+
Sbjct: 61 TFPCAIKACL---DVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 117
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
R+ + W ++++ Y Q G+ L+ F V S F+ +L AV+G+L G
Sbjct: 118 PIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGR 177
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
IH K + V+ LI++Y KC+ ++ A +F ++ D+ +W+++ + Q G
Sbjct: 178 IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCG 237
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS------S 311
+ L +M +G+ P VT + VL A + + + GR++H +I G
Sbjct: 238 DHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID 297
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
+ N V+D Y+KC + ++ F+ M DV SWN +I G+ + EA+E+ M
Sbjct: 298 DVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMC 357
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--SALVDMYAKCGR 429
P+ T+ +L+ S + G+ +K +D I + ++DM + G+
Sbjct: 358 EVQLKPDEVTFVGVLSACSHAGFVSQGR-NFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQ 416
Query: 430 LNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
L++A ++ + N V W +L H
Sbjct: 417 LDEAYELALTMPIEANPVVWRALLAACRLH 446
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 191/392 (48%), Gaps = 12/392 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V + L+ Y+KF + AQ F+E+P R+V+ W+A+++G++QIG E+ L F
Sbjct: 86 GLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETF 145
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R M + P+ +T G +S A GD +G+ IHG + G + VSN LI+MYGKC
Sbjct: 146 RRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKC 205
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ A +F+ E++ SW S+ S + QCG+H L++ +G+ + +VL
Sbjct: 206 KCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVL 265
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDK------FVAMGLINLYAKCEKLDLASRVFSNI 238
AC+ L L G +IH + L D + +I++YAKC + A VF +
Sbjct: 266 PACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERM 325
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +W+ +I GY G EA+++F +M L P EVTF VL A + GR
Sbjct: 326 XNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGR 385
Query: 299 Q-LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLA 356
L + K + V+D + L+E+ + M E + V W AL+A
Sbjct: 386 NFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRL 445
Query: 357 SCHYGEAIELLKDMLFE---GHCPNLYTYSNI 385
H A E+ +FE HC + SN+
Sbjct: 446 HKHAVLA-EVAAQRVFELEPEHCGSYVLMSNV 476
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/669 (31%), Positives = 348/669 (52%), Gaps = 7/669 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF ++ N LL MY K +A +F+ M ER+ +SW+ +ISGF Q G +
Sbjct: 65 LLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKS 124
Query: 61 LNYFRLMV--CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
L FR MV C N + A+S+CAS G EIHG + + G++ + + + LI
Sbjct: 125 LVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALI 184
Query: 119 NMYGKCGLLSSAQFVFDASLE-----RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
MY KCG + +A+ VF+ + RN W ++ Y L++F+ + G+
Sbjct: 185 EMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGI 244
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+ + VL C+ L +L VG QIH L+ L+ D V L+ +Y KC + + +
Sbjct: 245 SPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQ 304
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+F Q +L W +++ AQ G EA++ F + P V L A + +
Sbjct: 305 IFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSL 364
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G +H IKMGF S FV ++DFY KC +E + + F + D+VSWNALI+G
Sbjct: 365 KPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISG 424
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ EA++ +DM + PN T + IL++ + + + K+ HC +++ F++N
Sbjct: 425 FAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETN 484
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
++ ++L+ YAKCG ++ +R VF+ L +N V+WN++L+G+ HG E + M+E
Sbjct: 485 ALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKE 544
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
IKP+ TF +LS+C H G V+ GW YFNSM+ D+ + PR++ +V L G
Sbjct: 545 ANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLN 604
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
+AY+ I S P P+ +W LL+ CK H + L A I D ++L+N+Y
Sbjct: 605 QAYDLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFELDASSVGYRVLLANLYE 664
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
++ +E +VR +K+ LKK GCSW E+ N +H F ++ + D++ + LS+
Sbjct: 665 DSGNLNEVFRVRTDIKQMGLKKQPGCSWIEVDNSIHIFVAGDYSHDRSGDIYATIESLSL 724
Query: 654 HLFDGGYVP 662
+ GYVP
Sbjct: 725 EMKRVGYVP 733
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 149/519 (28%), Positives = 253/519 (48%), Gaps = 31/519 (5%)
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
D GK+IHG + + G + V N L+ MY KCG +A +F+ ER+S+SW +++S
Sbjct: 54 DVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMIS 113
Query: 151 SYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
+CQ G++V L +F ++ G + +C + L +CA + L G++IH + K +
Sbjct: 114 GFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGV 173
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA-----WSALIGGYAQLGKACEAI 263
+ D+F+ LI +Y KC + A VF I+ +L W+ +I GY A+
Sbjct: 174 DSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLAL 233
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
+LFV+M G+ P T VL + + + G+Q+H LI+ +G V +++ Y
Sbjct: 234 ELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMY 293
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
KC E SL+ F H++V W +++ + + EA+E + + + P+
Sbjct: 294 FKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILL 353
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
L S + G H +K GFDS+V +G ALVD Y KCG + A++VF LS++
Sbjct: 354 AALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTR 413
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL-------- 495
+LVSWN ++ G+AQ+ EAL+ + MQ +IKPN T +LS C H+ +
Sbjct: 414 DLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVH 473
Query: 496 --VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
+ W N+++ + S++ +A G + + P+ N+V W
Sbjct: 474 CYLLRHWFETNALVNN-----------SLISAYAKCGDIHSSRTVFEKLPVR-NEVTWNS 521
Query: 554 LLSGCKTH--KDLVLGRYAAEKILSTDPEDTSAHIMLSN 590
+L G H D + + K + P+ + +LS+
Sbjct: 522 ILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSS 560
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 204/442 (46%), Gaps = 42/442 (9%)
Query: 161 GLKIFLLSRKSGVAISEFSC-ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI 219
++++L + G + EF ++ A L ++ G QIH + K D FV L+
Sbjct: 22 AIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLL 81
Query: 220 NLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS--SGLMPS 277
+Y KC A +F ++ D +W+ +I G+ Q G +++ +F +M G +
Sbjct: 82 GMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHN 141
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
V L + A +K G ++H ++K G S F+ + +++ Y KC ++ + F+
Sbjct: 142 RVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFE 201
Query: 338 EMDEHDVVS-----WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
+ ++++V WN +I G++++ A+EL +ML G P+ T +L + S +
Sbjct: 202 RIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQL 261
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+ GKQ H I+ G D +V +G+AL++MY KCG + ++F + NLV W +++
Sbjct: 262 LDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVM 321
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW--HYF------- 503
+ AQ+G EALE +S + P+ + L AC + L G H F
Sbjct: 322 LNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFD 381
Query: 504 ------NSMIRDHGISPRMDHIASVVHLFA------------------CRGQTRRAYEFI 539
+++ +G M++ V + + C + +A+ +
Sbjct: 382 SDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDM 441
Query: 540 KSSPIEPNKVVWRCLLSGCKTH 561
+S I+PN V C+LS C TH
Sbjct: 442 QSKQIKPNTVTMACILSVC-TH 462
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 148/306 (48%), Gaps = 10/306 (3%)
Query: 261 EAIDLFVKMFSSGLMPSEVTF-SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
+AI +++ G E F ++ AF + + G+Q+H ++K GF FV N++
Sbjct: 21 DAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSL 80
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE--GHCP 377
L Y KC ++ F+ M+E D VSWN +I+G S Y +++ + + M+ E G
Sbjct: 81 LGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYH 140
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
N L+ + I + G + H +VK G DS+ + SAL++MY KCG + +A VF
Sbjct: 141 NRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVF 200
Query: 438 DH-----LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
+ L +N+ WN M++GY + ALE++ M E I P+ +T + VL C
Sbjct: 201 ERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQ 260
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
+ + G + +I G+ + +++ ++ G + + K S N V+W
Sbjct: 261 LLDLAVG-KQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQ-NHNLVMWG 318
Query: 553 CLLSGC 558
++ C
Sbjct: 319 SVMLNC 324
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/662 (32%), Positives = 359/662 (54%), Gaps = 17/662 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF T N +L Y+K ++ A +FD M R+ +SW+ +I G G +
Sbjct: 75 LLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKG 134
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +FR EPN T V A+ AC S G G ++HG + RSG V N L++M
Sbjct: 135 LWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSM 194
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
Y + A+ +FD ER+ ISW ++ Y Q GE L++FL ++ + + + +
Sbjct: 195 YADNDM-ERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGIT 253
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL ACA G++ +G +H +V L++D FV +I++Y+KC+ + A + F+ +
Sbjct: 254 MVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMP 313
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+++I G + K EA+ LF M +G EVT +L + + +
Sbjct: 314 CRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKF 373
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+HS++I+ G+ FV N+++D YSKC+L+E + K FD + D VSW+A+IAG
Sbjct: 374 IHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGK 433
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNIL---NISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
EAI L ++M PN T ++L ++S+D+ +W H ++ G + V +
Sbjct: 434 PDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKW---AHGIAIRRGLAAEVAV 490
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
G+A++DMYAKCG + +RK FD + KN+VSW M+ +GL R+AL + S M+ + +
Sbjct: 491 GTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGL 550
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KPN T + VLSAC H GLVEEG +F +M++DHG+ P ++H + +V + + G+ A
Sbjct: 551 KPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAM 610
Query: 537 EFIKSSP--IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
I+ P + +W LLS C++ + LG AA ++L +P+ ++ + + S++YA
Sbjct: 611 NLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAA 670
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF-----STSRFAQFQGI--DLHEV 647
+ +W + A++R ++K + ++ G S +++K F S R + G+ LH+
Sbjct: 671 SGLWADAARMRWLVKARGVRVVAGYSLVHVEDKAWRFVAGDESHPRAGEIWGVVEQLHDC 730
Query: 648 MN 649
M
Sbjct: 731 MK 732
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 246/481 (51%), Gaps = 13/481 (2%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
+ AC+S R GK IH + + G + + N +++ Y K G L SA FVFD+ R+S
Sbjct: 57 LKACSSL-PVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDS 115
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
+SW ++ + G GL F +R + + + AC LG ++ G+++H
Sbjct: 116 VSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGY 175
Query: 203 VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEA 262
+ + V L+++YA ++ A +F + D+ +WS +IGGY Q G+A A
Sbjct: 176 IIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMA 234
Query: 263 IDLFVKMFSSGLMPSE-VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
+ LF++M S+ + + +T VL A A+ + GR +H ++I G FV N+++D
Sbjct: 235 LQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIID 294
Query: 322 FYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYT 381
YSKC+ E + K F+EM + VSWN++I+G + + + EA+ L M G + T
Sbjct: 295 MYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVT 354
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
N+L K H +++ G++ N + ++L+D Y+KC + A K+FD L
Sbjct: 355 LVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLK 414
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA-CVHIGLVEEGW 500
+K+ VSW+ M+ G+ G EA+ ++ M + + KPN T + +L A V L W
Sbjct: 415 TKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKW 474
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ ++ R G++ + +++ ++A G+ +R+A++ I E N V W +++
Sbjct: 475 AHGIAIRR--GLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIP----EKNIVSWGAMIAA 528
Query: 558 C 558
C
Sbjct: 529 C 529
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+IL S +P + GK H ++K GFDS G++++D Y K G L+ A VFD + S+
Sbjct: 55 SILKACSSLP-VRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSR 113
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
+ VSWN M+ G+ G + L + + +PN +T + + AC +G +EEG
Sbjct: 114 DSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMH 173
Query: 504 NSMIR 508
+IR
Sbjct: 174 GYIIR 178
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/640 (32%), Positives = 352/640 (55%), Gaps = 5/640 (0%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A+++FD +P + +++ALI +S +G A++ +R M+ + PN YT+ + AC++
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSA 112
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
D R+G+ IH +GL + VS LI++Y +C A+ VF R+ ++W ++
Sbjct: 113 LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAM 172
Query: 149 LSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
L+ Y G + H + L + G+ + + S+L A G L G IH+ +
Sbjct: 173 LAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRAC 232
Query: 208 LEFDK---FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
LE ++ + L+++YAKC++L A RVF + + + WSALIGG+ + EA +
Sbjct: 233 LEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFN 292
Query: 265 LFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
LF M GL S + + L A + + G QLH+LI K G + +N++L Y
Sbjct: 293 LFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMY 352
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+K L+ E+ FDE+ D +S+ AL++G + + EA + K M P++ T
Sbjct: 353 AKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMV 412
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+++ S + A++ GK +H ++ G I ++L+DMYAKCG+++ +R+VFD + ++
Sbjct: 413 SLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPAR 472
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
++VSWNTM+ GY HGLG+EA ++ M+ P+D TFI +++AC H GLV EG H+F
Sbjct: 473 DVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWF 532
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
++M +GI PRM+H +V L A G AY+FI+S P++ + VW LL C+ HK+
Sbjct: 533 DTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKN 592
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
+ LG+ + I PE T ++LSN+++ A +DE A+VR I K K KK G SW E
Sbjct: 593 IDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIE 652
Query: 624 LQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ +H F + D++ ++ + V + GY D
Sbjct: 653 INGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQAD 692
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 222/459 (48%), Gaps = 15/459 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G H ++ L+ +Y++ +R A+ +F +MP R+V++W+A+++G++ GM A+ +
Sbjct: 130 GLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 189
Query: 65 RLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH---VSNCLINM 120
M L PN T V + A G G IH R+ LE N + L++M
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA-ISEFS 179
Y KC L A VF RN ++W +L+ + C +F G+ +S S
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
AS L CA L +L +G Q+H+L+ K + D + L+++YAK ++ A+ F I
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIA 369
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ D ++ AL+ G Q GKA EA +F KM + + P T ++ A + + G+
Sbjct: 370 VKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKC 429
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H +I G + T + N+++D Y+KC ++ S + FD+M DVVSWN +IAG+
Sbjct: 430 SHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGL 489
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSNV 414
EA L M +G P+ T+ ++ S + GK TH + P + +
Sbjct: 490 GKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI 549
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTML 452
+VD+ A+ G L++A + + K ++ W +L
Sbjct: 550 ----CMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 238/509 (46%), Gaps = 29/509 (5%)
Query: 108 ELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLL 167
EL H+S G L+ A+ VFD ++ ++ +L+ +Y G + ++
Sbjct: 40 ELEQHISR---------GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRS 90
Query: 168 SRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK 227
+ VA ++++ VL AC+ L +L+ G IH+ L D FV+ LI+LY +C +
Sbjct: 91 MLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCAR 150
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLG 286
A VF+ + + D+ AW+A++ GYA G AI + M GL P+ T +L
Sbjct: 151 FGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLP 210
Query: 287 AFADVKETIGGRQLHSLIIKMGFSS---FTFVANTVLDFYSKCELLEESLKTFDEMDEHD 343
A G +H+ ++ + +LD Y+KC+ L + + F M +
Sbjct: 211 LLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRN 270
Query: 344 VVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTH 402
V+W+ALI G + EA L KDML EG C + + ++ L + + + + G Q H
Sbjct: 271 DVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLH 330
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
I K G +++ ++L+ MYAK G +N+A FD ++ K+ +S+ +L G Q+G
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAE 390
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
EA ++ MQ ++P+ T + ++ AC H+ ++ G S+I G++ S+
Sbjct: 391 EAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVI-IRGLALETSICNSL 449
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD---- 578
+ ++A G+ + + P + V W +++G H LG+ A L
Sbjct: 450 IDMYAKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIHG---LGKEATTLFLGMKNQGF 505
Query: 579 -PEDTSAHIML-----SNVYAEANMWDET 601
P+D + ++ S + E W +T
Sbjct: 506 APDDVTFICLIAACSHSGLVTEGKHWFDT 534
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 127/253 (50%), Gaps = 6/253 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG H ++ N LL MY K IN+A FDE+ ++ IS+ AL+SG Q G E A
Sbjct: 336 SGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLV 395
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F+ M C +EP+ T V + AC+ + GK HG + GL L + + N LI+MY K
Sbjct: 396 FKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAK 455
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + ++ VFD R+ +SW ++++ Y G +FL + G A + + +
Sbjct: 456 CGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICL 515
Query: 184 LGACAVLGNLKVGMQ-IHSLVFKCAL--EFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ AC+ G + G ++ K + + ++ M ++L A+ LD A + ++ L
Sbjct: 516 IAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICM--VDLLARGGLLDEAYQFIQSMPL 573
Query: 241 -PDLTAWSALIGG 252
D+ W AL+G
Sbjct: 574 KADVRVWGALLGA 586
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/660 (31%), Positives = 361/660 (54%), Gaps = 3/660 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEV 59
M+ + + L+ MY KF DA ++F E+ ++ NV+ W+ +I GF G+ E
Sbjct: 196 MLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICES 255
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+L+ + L ++ ++ GA+ AC+ ++ G++IH + + GL + +V L++
Sbjct: 256 SLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLS 315
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG++ A+ VF +++ W +++++Y + L +F R+ V F+
Sbjct: 316 MYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFT 375
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++V+ C+VLG G +H+ +FK ++ + L+ LY+KC A VF +++
Sbjct: 376 LSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME 435
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLF--VKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
D+ AW +LI G + GK EA+ +F +K L P + V A A ++ G
Sbjct: 436 EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFG 495
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
Q+H +IK G FV ++++D YSKC L E +LK F M ++V+WN++I+ + +
Sbjct: 496 LQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRN 555
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+I+L ML +G P+ + +++L S ++ GK H ++ G S+ +
Sbjct: 556 NLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLK 615
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL+DMY KCG A +F + K+L++WN M+ GY HG AL ++ M++
Sbjct: 616 NALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGES 675
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+D TF+ ++SAC H G VEEG + F M +D+GI P M+H A++V L G AY
Sbjct: 676 PDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYS 735
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FIK+ PIE + +W CLLS +TH ++ LG +AEK+L +PE S ++ L N+Y EA +
Sbjct: 736 FIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGL 795
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
+E AK+ +MKEK L K GCSW E+ ++ + F + + ++ V+N+L ++ D
Sbjct: 796 KNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVD 855
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 247/500 (49%), Gaps = 15/500 (3%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
+T+ + AC++ + GK IHG + G + ++ L+NMY KCG L A VFD
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 137 SLE-------RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
+ R+ W S++ Y + G+ F GV FS + V+
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 190 LGNLKV--GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-LPDLTAW 246
GN + G QIH + + +L+ D F+ LI++Y K A RVF I+ ++ W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ +I G+ G ++DL++ ++ + +F+ LGA + + + GRQ+H ++K
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
MG + +V ++L YSKC ++ E+ F + + + WNA++A + + + A++L
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M + P+ +T SN+++ S + +GK H + K S I SAL+ +Y+K
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSK 420
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ--ENKIKPNDNTFI 484
CG DA VF + K++V+W +++ G ++G +EAL+++ M+ ++ +KP+ +
Sbjct: 421 CGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMT 480
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
V +AC + + G SMI+ G+ + +S++ L++ G A + S
Sbjct: 481 SVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMST 539
Query: 545 EPNKVVWRCLLSGCKTHKDL 564
E N V W ++S C + +L
Sbjct: 540 E-NMVAWNSMIS-CYSRNNL 557
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 207/425 (48%), Gaps = 22/425 (5%)
Query: 154 QCGEHVHGLKIFLLSRKSGVA---ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF 210
Q GE++ L ++ S+ G + S F+ S+L AC+ L NL G IH V +
Sbjct: 36 QKGEYLQALHLY--SKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRY 93
Query: 211 DKFVAMGLINLYAKCEKLDLASRVF-------SNIQLPDLTAWSALIGGYAQLGKACEAI 263
D F+A L+N+Y KC LD A +VF S + D+T W+++I GY + + E +
Sbjct: 94 DPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGV 153
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVK--ETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
F +M G+ P + S V+ G+Q+H +++ + +F+ ++D
Sbjct: 154 GCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALID 213
Query: 322 FYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
Y K L ++ + F E+ D+ +VV WN +I G S +++L ML + + L
Sbjct: 214 MYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY--MLAKNNSVKLV 271
Query: 381 --TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
+++ L S +G+Q HC +VK G ++ + ++L+ MY+KCG + +A VF
Sbjct: 272 STSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFS 331
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+ K L WN M+ YA++ G AL+++ M++ + P+ T V+S C +GL
Sbjct: 332 CVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNY 391
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG- 557
G + + I ++++ L++ G AY KS E + V W L+SG
Sbjct: 392 GKSVHAELFK-RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLISGL 449
Query: 558 CKTHK 562
CK K
Sbjct: 450 CKNGK 454
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/623 (33%), Positives = 342/623 (54%), Gaps = 2/623 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N L+ Y R DA+++FDEMP R+V+SW++L+S GM E A M+
Sbjct: 153 DVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMM 212
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ N + V + AC + D G +HG + + GL ++ N L++MYGK G L
Sbjct: 213 RSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLE 272
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
S+ VF+ E+N +SW S + + G H L++F L + V + +S+L A
Sbjct: 273 SSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALV 332
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
LG +G ++H + A+E D F+A L+++YAK + AS +F NI++ ++ +W+A
Sbjct: 333 DLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNA 392
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I Q G EA L ++M +G P+ T +L A + V G+Q+H+ I+
Sbjct: 393 MIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRS 452
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
S FV+N ++D Y+KC L + FD E D VS+N LI G+ S E++ L +
Sbjct: 453 LMSDLFVSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIVGYSQSQCCFESLHLFQ 511
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M G + ++ L+ S++ A + GK+ H +VK DS+ + ++L+D+Y K G
Sbjct: 512 QMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGG 571
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
L+ A K+F+ ++ K++ SWNTM++GY HG A E++ +M+++ I+ + ++I VLS
Sbjct: 572 MLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLS 631
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
C H GLV+ G YF+ MI + I P+ H A +V L GQ + E I++ P N
Sbjct: 632 VCSHGGLVDRGKKYFSQMIAQN-IKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANS 690
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
VW LL C+ H D+ L R AAE + PE++ + +L N+Y+E+ MW+E V+K+M
Sbjct: 691 DVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWNEANGVKKLM 750
Query: 609 KEKSLKKDTGCSWTELQNKMHYF 631
K + ++K+ SW + NK+ F
Sbjct: 751 KSRKVQKNPAYSWVQSGNKLQAF 773
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 152/490 (31%), Positives = 252/490 (51%), Gaps = 7/490 (1%)
Query: 16 LLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
LLL Y I A + P R+ W++L + +P AL + MV +
Sbjct: 53 LLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSRALASAALPCEALRVYNRMVRSGVR 112
Query: 74 PNYYTY---VGAVSACASRGDARSGKEIHGRMYRSGLEL-NSHVSNCLINMYGKCGLLSS 129
P+ T+ + A +A A G E+H R GL L + N L+ Y CG +
Sbjct: 113 PDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAAD 172
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A+ VFD R+ +SW SL+S+ G + + +SGV ++ S S+L AC
Sbjct: 173 ARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGT 232
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
+ G+ +H LV K L + L+++Y K L+ + VF+ +Q + +W++
Sbjct: 233 ERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSA 292
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
IG +A G + +++F M + P VT S +L A D+ G++LH I+
Sbjct: 293 IGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAV 352
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
S F+ANT++D Y+K E++ F+ ++ +VVSWNA+IA + EA L+ +
Sbjct: 353 ESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIE 412
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M G CPN +T N+L S + +++ GKQ H ++ S++ + +AL+D+YAKCG+
Sbjct: 413 MQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQ 472
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
LN AR +FD S K+ VS+NT++VGY+Q E+L ++ M+ I+ + +F+G LSA
Sbjct: 473 LNLARYIFDR-SEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSA 531
Query: 490 CVHIGLVEEG 499
C ++ ++G
Sbjct: 532 CSNLSAFKQG 541
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/600 (31%), Positives = 331/600 (55%), Gaps = 13/600 (2%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+EP+YY + + C + + IH + ++G + V L+N+Y KCG + +A+
Sbjct: 72 IEPSYY--LPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNAR 129
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
+FD+ RN ++W +L++ Y Q + + +F +SG S ++ L AC+ +
Sbjct: 130 KIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAIN 189
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
++K+G Q+H+ V K L++D + L +LY+K LD + VF +I ++ +W+A+I
Sbjct: 190 SIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVIS 249
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
+ GKA + F +M + P+E T + VL + GR +HSL IK+G+
Sbjct: 250 ACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQY 309
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---------- 361
+ N+++ Y KC ++E+ F +M ++V+WNA+I+GH +
Sbjct: 310 NLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSG 369
Query: 362 -EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ + ++ G P+L+T S++L + S + A+ G+Q H +K G+ S+VV+G+AL
Sbjct: 370 IEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTAL 429
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V+MY+KCG + A K F +S++ L+SW TM+ G AQHG +AL+++ M+ ++PN
Sbjct: 430 VNMYSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQ 489
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+GVL+AC H G+V+E YF M +++ I P MDH ++ +F + A++ I
Sbjct: 490 ITFVGVLAACCHSGMVDEALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIIN 549
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
EP++ +W L++GC+ LG YAAE++L +DT ++ L N+Y A W +
Sbjct: 550 KMDFEPSEFIWSILIAGCRNLGKQELGFYAAEQLLKLKLKDTETYVTLLNMYISAKRWQD 609
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
++VRK+MKE+ L K SW ++ K+H F T+ ++E++ +L GY
Sbjct: 610 VSRVRKLMKEEKLGKFNDWSWITIKEKIHSFKTTGRLHPHNAKMYELLEELLDKAKGSGY 669
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/508 (27%), Positives = 257/508 (50%), Gaps = 28/508 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G H ++ L+ +Y K + +A+K+FD + RNV++W+AL++G+ Q P +A
Sbjct: 100 IIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVVAWTALMTGYVQNSQPNIA 159
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F+ M+ P+ YT A++AC++ + GK++H + + L+ + + N L ++
Sbjct: 160 IDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIKYKLDYDPSIGNALCSL 219
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L S+ VF + E+N ISW +++S+ + G+ GL+ F + +EF+
Sbjct: 220 YSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAMGLRFFNEMLLEDIKPNEFTL 279
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL C V L +G +HSL K +++ + ++ LY KC +D A +F +
Sbjct: 280 TTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGS 339
Query: 241 PDLTAWSALIGGYAQ---LGK--------ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
+L W+A+I G+AQ L K EA+ +F+++ +G P T S VL +
Sbjct: 340 TNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLSSVLTVCS 399
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ G QLH+ IK G+ S V +++ YSKC + ++ K F EM ++SW
Sbjct: 400 RLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMSTRTLISWTT 459
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN-------ISSDIPAIEWGKQTH 402
+I G H +A++L +DM G PN T+ +L + + E ++ +
Sbjct: 460 MITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVDEALGYFEMMQKEY 519
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLG 461
+KP D L+ M+ K RL++A + + + + W+ ++ G LG
Sbjct: 520 R--IKPVMDHY----GCLIAMFVKLRRLDEAFDIINKMDFEPSEFIWSILIAGC--RNLG 571
Query: 462 REALEIYSMMQENKIKPNDN-TFIGVLS 488
++ L Y+ Q K+K D T++ +L+
Sbjct: 572 KQELGFYAAEQLLKLKLKDTETYVTLLN 599
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/640 (32%), Positives = 352/640 (55%), Gaps = 5/640 (0%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A+++FD +P + +++ALI +S +G A++ +R M+ + PN YT+ + AC++
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSA 112
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
D R+G+ IH +GL + VS LI++Y +C A+ VF R+ ++W ++
Sbjct: 113 LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAM 172
Query: 149 LSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
L+ Y G + H + L + G+ + + S+L A G L G IH+ +
Sbjct: 173 LAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRAC 232
Query: 208 LEFDK---FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
LE ++ + L+++YAKC++L A RVF + + + WSALIGG+ + EA +
Sbjct: 233 LEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFN 292
Query: 265 LFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
LF M GL S + + L A + + G QLH+LI K G + +N++L Y
Sbjct: 293 LFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMY 352
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+K L+ E+ FDE+ D +S+ AL++G + + EA + K M P++ T
Sbjct: 353 AKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMV 412
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+++ S + A++ GK +H ++ G I ++L+DMYAKCG+++ +R+VFD + ++
Sbjct: 413 SLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPAR 472
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
++VSWNTM+ GY HGLG+EA ++ M+ P+D TFI +++AC H GLV EG H+F
Sbjct: 473 DVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWF 532
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
++M +GI PRM+H +V L A G AY+FI+S P++ + VW LL C+ HK+
Sbjct: 533 DTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKN 592
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
+ LG+ + I PE T ++LSN+++ A +DE A+VR I K K KK G SW E
Sbjct: 593 IDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIE 652
Query: 624 LQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ +H F + D++ ++ + V + GY D
Sbjct: 653 INGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQAD 692
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 222/459 (48%), Gaps = 15/459 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G H ++ L+ +Y++ +R A+ +F +MP R+V++W+A+++G++ GM A+ +
Sbjct: 130 GLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 189
Query: 65 RLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH---VSNCLINM 120
M L PN T V + A G G IH R+ LE N + L++M
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA-ISEFS 179
Y KC L A VF RN ++W +L+ + C +F G+ +S S
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
AS L CA L +L +G Q+H+L+ K + D + L+++YAK ++ A+ F I
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIA 369
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ D ++ AL+ G Q GKA EA +F KM + + P T ++ A + + G+
Sbjct: 370 VKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKC 429
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H +I G + T + N+++D Y+KC ++ S + FD+M DVVSWN +IAG+
Sbjct: 430 SHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGL 489
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSNV 414
EA L M +G P+ T+ ++ S + GK TH + P + +
Sbjct: 490 GKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI 549
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTML 452
+VD+ A+ G L++A + + K ++ W +L
Sbjct: 550 ----CMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 221/459 (48%), Gaps = 16/459 (3%)
Query: 108 ELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLL 167
EL H+S G L+ A+ VFD ++ ++ +L+ +Y G + ++
Sbjct: 40 ELEQHISR---------GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRS 90
Query: 168 SRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK 227
+ VA ++++ VL AC+ L +L+ G IH+ L D FV+ LI+LY +C +
Sbjct: 91 MLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCAR 150
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLG 286
A VF+ + + D+ AW+A++ GYA G AI + M GL P+ T +L
Sbjct: 151 FGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLP 210
Query: 287 AFADVKETIGGRQLHSLIIKMGFSS---FTFVANTVLDFYSKCELLEESLKTFDEMDEHD 343
A G +H+ ++ + +LD Y+KC+ L + + F M +
Sbjct: 211 LLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRN 270
Query: 344 VVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTH 402
V+W+ALI G + EA L KDML EG C + + ++ L + + + + G Q H
Sbjct: 271 DVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLH 330
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
I K G +++ ++L+ MYAK G +N+A FD ++ K+ +S+ +L G Q+G
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAE 390
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
EA ++ MQ ++P+ T + ++ AC H+ ++ G S+I G++ S+
Sbjct: 391 EAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVI-IRGLALETSICNSL 449
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ ++A G+ + + P + V W +++G H
Sbjct: 450 IDMYAKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIH 487
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 127/253 (50%), Gaps = 6/253 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG H ++ N LL MY K IN+A FDE+ ++ IS+ AL+SG Q G E A
Sbjct: 336 SGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLV 395
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F+ M C +EP+ T V + AC+ + GK HG + GL L + + N LI+MY K
Sbjct: 396 FKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAK 455
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + ++ VFD R+ +SW ++++ Y G +FL + G A + + +
Sbjct: 456 CGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICL 515
Query: 184 LGACAVLGNLKVGMQ-IHSLVFKCAL--EFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ AC+ G + G ++ K + + ++ M ++L A+ LD A + ++ L
Sbjct: 516 IAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICM--VDLLARGGLLDEAYQFIQSMPL 573
Query: 241 -PDLTAWSALIGG 252
D+ W AL+G
Sbjct: 574 KADVRVWGALLGA 586
>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Glycine max]
Length = 686
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/658 (33%), Positives = 341/658 (51%), Gaps = 36/658 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G ++ N ++ +Y K SR +DA+ LFDEMP RN++S++ ++S F+ G P A
Sbjct: 29 IIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNIVSFTTMVSAFTNSGRPHEA 88
Query: 61 LNYFRLMV-CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L + M+ ++PN + Y + AC GD G +H + + LE ++ + N L++
Sbjct: 89 LTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQHVSEARLEFDTVLMNALLD 148
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG----------------------- 156
MY KCG L A+ VF +NS SW +L+ + + G
Sbjct: 149 MYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDAFNLFDQMPEPDLVSWNSI 208
Query: 157 -------EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
H L+ + G+ + F+ L AC +LG L +G QIH + K LE
Sbjct: 209 IAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACGLLGELTMGRQIHCCIIKSGLE 268
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFS-NIQLPD-LTAWSALIGGYAQLGKACEAIDLFV 267
+ LI++Y+ C+ LD A ++F N L + L W++++ GY G A+ +
Sbjct: 269 CSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLSGYVANGDWWRALGMIA 328
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
M SG TFS L Q+H LII G+ V + ++D Y+K
Sbjct: 329 CMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGYELDHVVGSILIDLYAKQG 388
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI-ELLKDMLFEGHCPNLYTYSNIL 386
+ +L+ F+ + DVV+W++LI G A G + L DM+ + + S +L
Sbjct: 389 NINSALRLFERLPNKDVVAWSSLIVG-CARLGLGTLVFSLFMDMVHLDLEIDHFVLSIVL 447
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+SS + +++ GKQ H +K G++S VI +AL DMYAKCG + DA +FD L + +
Sbjct: 448 KVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYAKCGEIEDALALFDCLYEIDTM 507
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
SW ++VG AQ+G +A+ I M E+ KPN T +GVL+AC H GLVEE W F S+
Sbjct: 508 SWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITILGVLTACRHAGLVEEAWTIFKSI 567
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVL 566
+HG++P +H +V +FA G+ + A I P +P+K +W LL C T+K+ L
Sbjct: 568 ETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMPFKPDKTIWCSLLDACGTYKNRHL 627
Query: 567 GRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
AE +L+T PED S +IMLSNVYA MWD +KVR+ +++ + K G SW E+
Sbjct: 628 ANIVAEHLLATSPEDASVYIMLSNVYASLGMWDNLSKVREAVRKVGI-KGAGKSWIEI 684
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 218/424 (51%), Gaps = 35/424 (8%)
Query: 82 AVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERN 141
A+ C + K +H + + GL + + N +I++Y KC A+ +FD RN
Sbjct: 9 ALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRN 68
Query: 142 SISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQI 199
+S+ +++S++ G L ++ +L K+ V ++F ++VL AC ++G++++GM +
Sbjct: 69 IVSFTTMVSAFTNSGRPHEALTLYNHMLESKT-VQPNQFLYSAVLKACGLVGDVELGMLV 127
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
H V + LEFD + L+++Y KC L A RVF I + T+W+ LI G+A+ G
Sbjct: 128 HQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLM 187
Query: 260 CEAIDLFVK------------------------------MFSSGLMPSEVTFSYVLGAFA 289
+A +LF + M GL TF L A
Sbjct: 188 RDAFNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACG 247
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE--HDVVSW 347
+ E GRQ+H IIK G + ++++D YS C+LL+E++K FD+ + W
Sbjct: 248 LLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVW 307
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
N++++G++A+ + A+ ++ M G + YT+S L + + Q H I+
Sbjct: 308 NSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIIT 367
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
G++ + V+GS L+D+YAK G +N A ++F+ L +K++V+W++++VG A+ GLG +
Sbjct: 368 RGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSL 427
Query: 468 YSMM 471
+ M
Sbjct: 428 FMDM 431
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 147/304 (48%), Gaps = 36/304 (11%)
Query: 286 GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
G F +K + LHSLIIK+G S+ F+ N+++ Y+KC +++ FDEM ++V
Sbjct: 14 GRFQAIKH---AKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNIV 70
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCC 404
S+ +++ S EA+ L ML PN + YS +L + +E G H
Sbjct: 71 SFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQH 130
Query: 405 IVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGRE- 463
+ + + + V+ +AL+DMY KCG L DA++VF + KN SWNT+++G+A+ GL R+
Sbjct: 131 VSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDA 190
Query: 464 -----------------------------ALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
AL+ SMM +K + TF L AC +G
Sbjct: 191 FNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACGLLG 250
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFIKSSPIEPNKVVWRC 553
+ G +I+ G+ I+S++ +++ C+ F K+SP+ + VW
Sbjct: 251 ELTMGRQIHCCIIKS-GLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNS 309
Query: 554 LLSG 557
+LSG
Sbjct: 310 MLSG 313
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/640 (31%), Positives = 347/640 (54%), Gaps = 5/640 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
+ L+ +YV F + A F +P + +I+W+A++ G +G A++++ M+ +
Sbjct: 71 SQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVT 130
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YTY + AC+S + G+ +H M+ + N +V +I+M+ KCG + A+ +
Sbjct: 131 PDNYTYPLVLKACSSLHALQLGRWVHETMH-GKTKANVYVQCAVIDMFAKCGSVEDARRM 189
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ +R+ SW +L+ GE + L +F R G+ AS+L AC L +
Sbjct: 190 FEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAV 249
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
K+GM + + E D +V+ +I++Y KC A RVFS++ D+ +WS LI GY
Sbjct: 250 KLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGY 309
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+Q E+ L++ M + GL + + + VL A ++ G+++H+ ++K G S
Sbjct: 310 SQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDV 369
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V + ++ Y+ C ++E+ F+ + D++ WN++I G+ + A + +
Sbjct: 370 VVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGA 429
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
H PN T +IL I + + A+ GK+ H + K G NV +G++L+DMY+KCG L
Sbjct: 430 EHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELG 489
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
KVF + +N+ ++NTM+ HG G + L Y M+E +PN TFI +LSAC H
Sbjct: 490 EKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHA 549
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GL++ GW +NSMI D+GI P M+H + +V L G AY+FI P+ P+ V+
Sbjct: 550 GLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGS 609
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL C+ H + L AE+IL +D+ +++LSN+YA W++ +KVR ++K+K L
Sbjct: 610 LLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGL 669
Query: 614 KKDTGCSWTELQNKMHYF-STSRF-AQFQGIDLHEVMNQL 651
+K G SW ++ + ++ F +TS F F I+ E +N L
Sbjct: 670 EKKPGSSWIQVGHCIYVFHATSAFHPAFAKIE--ETLNSL 707
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 224/452 (49%), Gaps = 3/452 (0%)
Query: 110 NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
+S ++ L+N+Y G L A F A + I+W ++L G + +
Sbjct: 66 SSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSML 125
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
+ GV ++ VL AC+ L L++G +H + + +V +I+++AKC ++
Sbjct: 126 QHGVTPDNYTYPLVLKACSSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVE 184
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A R+F + DL +W+ALI G G+ EA+ LF KM S GLMP V + +L A
Sbjct: 185 DARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACG 244
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
++ G L ++ GF S +V+N V+D Y KC E+ + F M DVVSW+
Sbjct: 245 RLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWST 304
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
LIAG+ +C Y E+ +L M+ G N +++L + ++ GK+ H ++K G
Sbjct: 305 LIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEG 364
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
S+VV+GSAL+ MYA CG + +A +F+ S K+++ WN+M+VGY G A +
Sbjct: 365 LMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFR 424
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
+ + +PN T + +L C +G + +G + + G+ + S++ +++
Sbjct: 425 RIWGAEHRPNFITVVSILPICTQMGALRQG-KEIHGYVTKSGLGLNVSVGNSLIDMYSKC 483
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
G + K + N + ++S C +H
Sbjct: 484 GFLELGEKVFKQMMVR-NVTTYNTMISACGSH 514
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 236/510 (46%), Gaps = 6/510 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
NV ++ M+ K + DA+++F+EMP+R++ SW+ALI G G AL FR M
Sbjct: 166 NVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMR 225
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
L P+ + AC + G + RSG E + +VSN +I+MY KCG
Sbjct: 226 SEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPL 285
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A VF + + +SW +L++ Y Q + K+++ G+A + SVL A
Sbjct: 286 EAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALG 345
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L LK G ++H+ V K L D V LI +YA C + A +F D+ W++
Sbjct: 346 KLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNS 405
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I GY +G A F +++ + P+ +T +L + G+++H + K G
Sbjct: 406 MIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSG 465
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
V N+++D YSKC LE K F +M +V ++N +I+ + + + +
Sbjct: 466 LGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYE 525
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKC 427
M EG+ PN T+ ++L+ S ++ G + ++ G + N+ S +VD+ +
Sbjct: 526 QMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRA 585
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN--KIKPNDNTFIG 485
G L+ A K + + L+G + +E+ ++ E ++K +D+
Sbjct: 586 GDLDGAYKFITRMPMTPDANVFGSLLGACRL---HNKVELTELLAERILQLKADDSGHYV 642
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
+LS G E SMI+D G+ +
Sbjct: 643 LLSNLYASGKRWEDMSKVRSMIKDKGLEKK 672
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 185/371 (49%), Gaps = 8/371 (2%)
Query: 192 NLKVGMQIHSLV-----FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
NL +H+L+ F+ A L+N+Y L A F + + AW
Sbjct: 42 NLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAW 101
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+A++ G +G +AI + M G+ P T+ VL A + + GR +H +
Sbjct: 102 NAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHE-TMH 160
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
+ +V V+D ++KC +E++ + F+EM + D+ SW ALI G + + EA+ L
Sbjct: 161 GKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLL 220
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+ M EG P+ ++IL + A++ G C V+ GF+S++ + +A++DMY K
Sbjct: 221 FRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCK 280
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG +A +VF H+ ++VSW+T++ GY+Q+ L +E+ ++Y M + N V
Sbjct: 281 CGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSV 340
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L A + L+++G N ++++ +S + A +V ++A G + A E I +
Sbjct: 341 LPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIV-MYANCGSIKEA-ESIFECTSDK 398
Query: 547 NKVVWRCLLSG 557
+ +VW ++ G
Sbjct: 399 DIMVWNSMIVG 409
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 139/286 (48%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SGF ++ N ++ MY K +A ++F M +V+SWS LI+G+SQ + + +
Sbjct: 260 VRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESY 319
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M+ L N + A + GKE+H + + GL + V + LI MY
Sbjct: 320 KLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMY 379
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
CG + A+ +F+ + +++ + W S++ Y G+ F + + +
Sbjct: 380 ANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVV 439
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L C +G L+ G +IH V K L + V LI++Y+KC L+L +VF + +
Sbjct: 440 SILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVR 499
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
++T ++ +I G+ + + + +M G P++VTF +L A
Sbjct: 500 NVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSA 545
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 132/254 (51%), Gaps = 2/254 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V+ + L++MY I +A+ +F+ +++++ W+++I G++ +G E A
Sbjct: 360 VLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESA 419
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
FR + PN+ T V + C G R GKEIHG + +SGL LN V N LI+M
Sbjct: 420 FFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDM 479
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L + VF + RN ++ +++S+ G+ GL + ++ G ++ +
Sbjct: 480 YSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTF 539
Query: 181 ASVLGACAVLGNLKVGMQIH-SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L AC+ G L G ++ S++ +E + +++L + LD A + + +
Sbjct: 540 ISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMP 599
Query: 240 L-PDLTAWSALIGG 252
+ PD + +L+G
Sbjct: 600 MTPDANVFGSLLGA 613
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/599 (33%), Positives = 327/599 (54%), Gaps = 1/599 (0%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ A+S C G G+ H + + GL + V LI+MY KCG + SA V
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
+D ++ + L+S+Y + G V ++F+ G + ++ +++L C + +
Sbjct: 171 YDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAI 230
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+ G Q+H+ V K + V L+ LY+KC ++ A VF +++ ++ +W+A I G+
Sbjct: 231 QEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGF 290
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q G +A+ F M SG+ P+E TFS VL + VK+ I GR H+ +IK G +S
Sbjct: 291 YQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGV 350
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLASCHYGEAIELLKDMLF 372
FV ++D YS ++E+ K F +M VSWNALIAG++ + +A+E M+
Sbjct: 351 FVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVK 410
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
E N +TYSNI S P++ Q H ++K +SN+ + S+L++ Y +CG L +
Sbjct: 411 EDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLEN 470
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A +VF +S ++VSWN+++ Y+Q+G +A+ + M E KP TF+ VLSAC H
Sbjct: 471 AVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSH 530
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
GLV+EG +F SM++D+ I P H + +V + GQ A +FIK ++P +WR
Sbjct: 531 SGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWR 590
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL+ C+ + +L + Y AEKIL +P D + ++ LSN+YAE W + R++M++K
Sbjct: 591 PLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKE 650
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSHFE 671
+ K+ GCSW E+ NKM+ F + A + ++E + QL + D GY P H E
Sbjct: 651 ISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVLHPE 709
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/546 (32%), Positives = 298/546 (54%), Gaps = 31/546 (5%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TY A+ A G+ +H + GL ++ + L++ Y +CG LS+A+ +FD
Sbjct: 805 TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
N W+ L + + G + L F +K G+ ++F S+L AC L + + G
Sbjct: 865 PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGE 924
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
+H+++ K + E D ++ LI +Y+KC ++ A RVF I DL +A++ GYAQ G
Sbjct: 925 NMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHG 984
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
EA+BL KM +G+ P+ V+++ ++ F+ V G + + S + ++ AN
Sbjct: 985 FVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQV----GDKSMVSEVFRL------MTAN 1034
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
V E DVVSW ++I+G + + H E + K+ML +G CP
Sbjct: 1035 GV---------------------EPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCP 1073
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ T S++L +++ + GK+ H + G + +V + SALVDMYAKCG +++A+ +F
Sbjct: 1074 SSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILF 1133
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ +N V+WN+++ GYA HG EA+E+++ M+E+ K + TF VL+AC H G+VE
Sbjct: 1134 YMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVE 1193
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G F M + I PR++H A +V L G+ AY+ IK+ P+EP+K VW LL
Sbjct: 1194 LGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGA 1253
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
C+ H ++ L AAE + +PE + ++LSN+YA+A W AK++K+MK++ K
Sbjct: 1254 CRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFP 1313
Query: 618 GCSWTE 623
GCSW E
Sbjct: 1314 GCSWIE 1319
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 239/475 (50%), Gaps = 3/475 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY K ++ A +++D+M + + + LIS +++ G A F + PN
Sbjct: 154 LIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPN 213
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
+YTY ++ C + + GK++H + + + V N L+ +Y KCG++ A+ VF+
Sbjct: 214 HYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFE 273
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+ +RN ISW + ++ + Q G+ LK F + R+SG+ +EF+ + VL +C + +
Sbjct: 274 SLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFID 333
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-QLPDLTAWSALIGGYA 254
G H+ V K + FV +I++Y+ ++D A + F + + +W+ALI GY
Sbjct: 334 GRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYV 393
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
K +A++ F +M + +E T+S + A + Q+HS +IK S
Sbjct: 394 LNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLH 453
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
VA+++++ Y++C LE +++ F ++ + DVVSWN++I + + +AI LL+ M+ EG
Sbjct: 454 VASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEG 513
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDA 433
+ P T+ +L+ S ++ G++ +V+ S +VD+ + G+L +A
Sbjct: 514 NKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENA 573
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
L+ K S L+ ++ + E Y + ++PND T LS
Sbjct: 574 LDFIKKLTMKPTASIWRPLLAACRYNSNLQMAE-YVAEKILDLEPNDATVYVTLS 627
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 216/472 (45%), Gaps = 48/472 (10%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL +Y K + +A+ +F+ + +RN+ISW+A I+GF Q G + AL F +M +E
Sbjct: 253 NALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIE 312
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN +T+ +++C D G+ H ++ + G+ V +I+MY G + A+
Sbjct: 313 PNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQ 372
Query: 134 FDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
F +++SW +L++ Y + ++ F K VA +EF+ +++ AC+ +
Sbjct: 373 FKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPS 432
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L +QIHS + K +E + VA LI Y +C L+ A +VF+ I D+ +W+++I
Sbjct: 433 LATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKA 492
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-LHSLIIKMGFSS 311
Y+Q G +AI L KM G P+ TF VL A + G++ S++
Sbjct: 493 YSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQP 552
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS-WNALIAGHLASCHYGEAIELLKDM 370
+ ++D + LE +L ++ S W L LA+C Y +++ +
Sbjct: 553 EETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPL----LAACRYNSNLQMAE-- 606
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
Y IL++ + D+ V + L +MYA+ GR
Sbjct: 607 ---------YVAEKILDLEPN-------------------DATVYV--TLSNMYAEVGRW 636
Query: 431 NDA---RKVFDH--LSSKNLVSW----NTMLVGYAQHGLGREALEIYSMMQE 473
DA R++ + +S + SW N M ++ E ++Y +++
Sbjct: 637 ADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQ 688
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 159/344 (46%), Gaps = 13/344 (3%)
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
S T++ + +A + GR LH+ ++ +G + T+ A ++ FY++C L + K F
Sbjct: 802 SSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLF 861
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
D++ ++ W L Y EA+ +M EG PN + +IL +
Sbjct: 862 DKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRR 921
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G+ H I+K F+S+ I SAL+ MY+KCG + A +VFD + K+LV N M+ GYA
Sbjct: 922 TGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYA 981
Query: 457 QHGLGREALEIYSMMQENKIKPND---NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
QHG EAL++ MQ+ +KPN NT I S +V E + ++ +G+
Sbjct: 982 QHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFR----LMTANGVE 1037
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIE---PNKVVWRCLLSGCKTHKDLVLGR-- 568
P + SV+ F ++ K + P+ V LL C +L G+
Sbjct: 1038 PDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEI 1097
Query: 569 YAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
+ ++ + +D L ++YA+ E + +M E++
Sbjct: 1098 HGYAMVIGVE-KDVYVRSALVDMYAKCGYISEAKILFYMMPERN 1140
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 184/444 (41%), Gaps = 101/444 (22%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ Y + ++++A+KLFD++P N+ W L ++ G E AL+ F M L PN
Sbjct: 844 LMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPN 903
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
+ + AC D R+G+ +H + ++ E ++++ + LI MY KCG + A VFD
Sbjct: 904 QFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFD 963
Query: 136 -----------------------------------ASLERNSISWVSLLSSYCQCGEHVH 160
A ++ N +SW +L++ + Q G+
Sbjct: 964 WIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSM 1023
Query: 161 GLKIFLLSRKSGV---------AISEF--------------------------SCASVLG 185
++F L +GV IS F + +S+L
Sbjct: 1024 VSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLP 1083
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
AC + NL+ G +IH +E D +V L+++YAKC + A +F + +
Sbjct: 1084 ACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVT 1143
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W++LI GYA G EAI+LF +M S +TF+ VL A + H+ ++
Sbjct: 1144 WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACS-----------HAGMV 1192
Query: 306 KMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIA 352
++G S F + ++D + L E+ M E D W AL
Sbjct: 1193 ELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGAL-- 1250
Query: 353 GHLASCHYGEAIELLK---DMLFE 373
L +C IEL + + LFE
Sbjct: 1251 --LGACRNHGNIELAEVAAEHLFE 1272
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 16/263 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRIND---AQKLFDEMP----ERNVISWSALISGFSQ 53
M +G PNV+++N L+ FS++ D ++F M E +V+SW+++ISGF Q
Sbjct: 996 MQQAGVKPNVVSWNTLI---AGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQ 1052
Query: 54 IGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV 113
+ F+ M+ P+ T + AC + + R GKEIHG G+E + +V
Sbjct: 1053 NFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYV 1112
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
+ L++MY KCG +S A+ +F ERN+++W SL+ Y G +++F +S
Sbjct: 1113 RSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDT 1172
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDL 230
+ + +VL AC+ G +++G + + ++ + + M ++L + KL
Sbjct: 1173 KLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACM--VDLLGRAGKLSE 1230
Query: 231 ASRVFSNIQL-PDLTAWSALIGG 252
A + + + PD W AL+G
Sbjct: 1231 AYDLIKAMPVEPDKFVWGALLGA 1253
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I S N+ + L+ Y + + +A ++F ++ + +V+SW+++I +SQ G P A
Sbjct: 443 LIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKA 502
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
+ R M+ +P T++ +SAC+ G + G+E M + ++ +C+++
Sbjct: 503 IFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVD 562
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ G+ G L +A F+ +++ + W LL++
Sbjct: 563 ILGRAGQLENALDFIKKLTMKPTASIWRPLLAA 595
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/653 (30%), Positives = 357/653 (54%), Gaps = 3/653 (0%)
Query: 20 YVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTY 79
++ + I A+ +FD++P+ +V+ W+ +I ++ G + ++ + M+ + P +T+
Sbjct: 51 HISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTF 110
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA--S 137
+ AC+S + G+ IH + GL ++ +VS L++MY KCG L AQ +F++
Sbjct: 111 PFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISH 170
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+R+ ++W ++++++ H + +++GV + + S+L L G
Sbjct: 171 QDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGK 230
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
IH+ + + + L+++YAKC L A ++F+ + + WSA+IGGY
Sbjct: 231 AIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHD 290
Query: 258 KACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
+A+ L+ M GL P+ T + +L A A + + G++LH +IK G T V
Sbjct: 291 SISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVG 350
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
N+++ Y+KC +++ ++ DEM D VS++A+I+G + + + +A+ + + M G
Sbjct: 351 NSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIA 410
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P L T +L S + A++ G H V GF ++ I +A++DMY+KCG++ +R++
Sbjct: 411 PYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREI 470
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
FD + +++++SWNTM++GY HGL EAL ++ +Q +KP+D T I VLSAC H GLV
Sbjct: 471 FDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLV 530
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
EG ++F+SM ++ I PRM H +V L A G AY FI+ P PN +W LL+
Sbjct: 531 TEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLA 590
Query: 557 GCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
C+THK++ +G ++KI PE T +++SN+Y+ WD+ A +R I + KK
Sbjct: 591 ACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKS 650
Query: 617 TGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
GCSW E+ +H F + Q +++ + +L V + GY D + H
Sbjct: 651 PGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLH 703
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 212/453 (46%), Gaps = 15/453 (3%)
Query: 16 LLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
LL MY K + AQ LF+ + +R++++W+A+I+ FS + ++ M +
Sbjct: 148 LLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVT 207
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN T V + GK IH R+ N + L++MY KC LL A+ +
Sbjct: 208 PNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKI 267
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLG 191
F+ ++N + W +++ Y L ++ +L G+ + + A++L ACA L
Sbjct: 268 FNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLC-IYGLNPTPATLATMLRACAQLT 326
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+LK G ++H + K ++ D V LI++YAKC +D A + D ++SA+I
Sbjct: 327 DLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIIS 386
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G Q G A +A+ +F +M SSG+ P T +L A + + G H + GF++
Sbjct: 387 GCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTN 446
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
T + N ++D YSKC + S + FD M D++SWN +I G+ EA+ L +++
Sbjct: 447 DTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQ 506
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGSALVDMYAK 426
G P+ T +L+ S + GK + +KP + +VD+ A+
Sbjct: 507 ALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYI----CMVDLLAR 562
Query: 427 CGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
G L++A + N+ W +L H
Sbjct: 563 AGNLDEAYTFIQRMPFVPNVRIWGALLAACRTH 595
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 185/369 (50%), Gaps = 9/369 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I + F NV+ LL MY K + A+K+F+ + ++N + WSA+I G+ AL
Sbjct: 237 IRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDAL 296
Query: 62 NYFRLMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M+C L P T + ACA D + GK++H M +SG++L++ V N LI+M
Sbjct: 297 ALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISM 356
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG++ +A D + ++++S+ +++S Q G L IF + SG+A +
Sbjct: 357 YAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETM 416
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++L AC+ L L+ G H D + +I++Y+KC K+ ++ +F +Q
Sbjct: 417 IALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQN 476
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+ +I GY G EA+ LF ++ + GL P +VT VL A + G+
Sbjct: 477 RDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYW 536
Query: 301 HSLIIKMGFSSFTFVANTV--LDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLAS 357
S + F+ +A+ + +D ++ L+E+ M +V W AL LA+
Sbjct: 537 FS-SMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGAL----LAA 591
Query: 358 CHYGEAIEL 366
C + IE+
Sbjct: 592 CRTHKNIEM 600
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 6/256 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI SG + N L+ MY K +++A DEM ++ +S+SA+ISG Q G E A
Sbjct: 338 MIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKA 397
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M + P T + + AC+ + G HG G ++ + N +I+M
Sbjct: 398 LLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDM 457
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG ++ ++ +FD R+ ISW +++ Y G V L +F + G+ + +
Sbjct: 458 YSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTL 517
Query: 181 ASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+VL AC+ G + G S + F ++ M ++L A+ LD A
Sbjct: 518 IAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICM--VDLLARAGNLDEAYTFIQR 575
Query: 238 IQ-LPDLTAWSALIGG 252
+ +P++ W AL+
Sbjct: 576 MPFVPNVRIWGALLAA 591
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/668 (31%), Positives = 357/668 (53%), Gaps = 15/668 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV---CC 70
N L+ MY + R++DA+K+F+ M RN++SW+AL++ + P L FR +
Sbjct: 103 NSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVAD---PRRGLELFRDCLEDLGG 159
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
P+ T V + CA+ +G+ +HG +SG + VSN L++MY KCG ++ A
Sbjct: 160 TAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADA 219
Query: 131 QFVF---DASLERNSISWVSLLSSYCQCGEH--VHGLKIFLLSRKSGVAISEFSCASVLG 185
+ F RN +SW +L Y + GE GL + + GV E + SVL
Sbjct: 220 ECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLP 279
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFD-KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C+ L L ++H+ V + L V LI Y +C L A RVF I ++
Sbjct: 280 VCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVS 339
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSS-GLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+ALIG +AQ G+A AI+LF +M ++ G P + +L A ++K + G+ H
Sbjct: 340 SWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGF 399
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
I++ G +F+ ++L Y +C + FD ++E D VSWN +IAG+ + GE+
Sbjct: 400 ILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGES 459
Query: 364 IELLKDMLFE--GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
++L ++M + GH P+L ++ L S++PA+ GK+ HC +K + + S+++
Sbjct: 460 LQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSII 519
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY+KCG ++DAR FD L +K+ VSW M+ GYA +G G+EA+ +Y M ++P+
Sbjct: 520 DMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGF 579
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
T++G+L AC H G++E+G +F M I +++H A V+ + + G+ A ++
Sbjct: 580 TYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEV 639
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P EP+ + +LS C H ++ LG+ A+K+L +P +++ SN+YA + WDE
Sbjct: 640 MPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEM 699
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
KVRK++++ + K+ GCSW ++ K++ F + + + ++ L + GY
Sbjct: 700 RKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGYA 759
Query: 662 PDPIYSSH 669
PD H
Sbjct: 760 PDTTVMLH 767
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 232/447 (51%), Gaps = 24/447 (5%)
Query: 44 WSALISGFSQIGMPEVALNYFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGR 101
W+ L++ S+ G AL ++ + P+ +T A+ +C RGD G+++H
Sbjct: 33 WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSC--RGD--DGRQVHAV 88
Query: 102 MYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH 160
+ GL + + V N L++MYG+CG + A+ VF+ RN +SW +L+++ +
Sbjct: 89 AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAV---ADPRR 145
Query: 161 GLKIF---LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
GL++F L A E + +VL CA L + G +H L K + V+
Sbjct: 146 GLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNV 205
Query: 218 LINLYAKCEKLDLASRVFSNIQLP-----DLTAWSALIGGYAQLGKACEAIDLF--VKMF 270
L+++YAKC ++ A F ++ P ++ +W+ ++GGYA+ G+A A L ++M
Sbjct: 206 LVDMYAKCGEMADAECAF--LEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQME 263
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS-SFTFVANTVLDFYSKCELL 329
G+ E+T VL + + E R+LH+ +++ G + V N ++ Y +C L
Sbjct: 264 ERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCL 323
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE-GHCPNLYTYSNILNI 388
+ + FD + V SWNALI H + AIEL ++M G P+ ++ ++L
Sbjct: 324 LHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLA 383
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
++ + GK H I++ G + + I +L+ +Y +CGR + AR +FD + K+ VSW
Sbjct: 384 CGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSW 443
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENK 475
NTM+ GY+Q+GL E+L+++ MQ K
Sbjct: 444 NTMIAGYSQNGLPGESLQLFREMQSKK 470
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 215/446 (48%), Gaps = 18/446 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE---RNVISWSALISGFSQIGMPE 58
+ SG+ N L+ MY K + DA+ F E P RNV+SW+ ++ G+++ G
Sbjct: 192 VKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAG 251
Query: 59 VALNYFRLMVC--CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH-VSN 115
A R M + + T + + C+ + +E+H + R GL L V N
Sbjct: 252 AAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPN 311
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVA 174
LI YG+CG L A VFD + SW +L+ ++ Q GE +++F ++ G
Sbjct: 312 ALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQK 371
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
FS S+L AC L +L G H + + LE D F+ + L+++Y +C + LA +
Sbjct: 372 PDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVL 431
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS--SGLMPSEVTFSYVLGAFADVK 292
F ++ D +W+ +I GY+Q G E++ LF +M S G PS + + L A +++
Sbjct: 432 FDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELP 491
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
G+++H +K +F++++++D YSKC ++++ FD + D VSW +I
Sbjct: 492 AVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMIT 551
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK----- 407
G+ + EA+ L M EG P+ +TY +L +E G C +
Sbjct: 552 GYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDG----LCFFQEMRNL 607
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDA 433
P ++ + + ++ M ++ GR DA
Sbjct: 608 PKIEAKLEHYACVIGMLSRAGRFADA 633
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 174/356 (48%), Gaps = 14/356 (3%)
Query: 145 WVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
W LL+ + G H L I LL+ GVA F+ L +C G Q+H++
Sbjct: 33 WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSC----RGDDGRQVHAV 88
Query: 203 VFKCAL-EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACE 261
K L + D FV L+++Y +C ++D A +VF + +L +W+AL+ A + E
Sbjct: 89 AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLE 148
Query: 262 AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
++ P E T VL A + GR +H L +K G+ + V+N ++D
Sbjct: 149 LFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVD 208
Query: 322 FYSKCELLEESLKTFDEMDE---HDVVSWNALIAGHLASCHYGEAIELLKDMLFE--GHC 376
Y+KC + ++ F E +VVSWN ++ G+ + G A LL++M E G
Sbjct: 209 MYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVP 268
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD-SNVVIGSALVDMYAKCGRLNDARK 435
+ T ++L + S +P + ++ H +V+ G + ++ +AL+ Y +CG L A +
Sbjct: 269 ADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACR 328
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSAC 490
VFD + SK + SWN ++ +AQ+G A+E++ M KP+ + +L AC
Sbjct: 329 VFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLAC 384
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/669 (31%), Positives = 357/669 (53%), Gaps = 10/669 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G ++ N ++ +Y K +++A +LFD+MPE+N+ISW++LI GFS+ G A
Sbjct: 237 VKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAY 296
Query: 62 NYFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
FR ++ L P+ T V + C+ G+ G IHG + GL V N LI+
Sbjct: 297 RAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALID 356
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK-----SGVA 174
MY KCG LS A +F ++ +SW S++ +Y + G + F L RK +
Sbjct: 357 MYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREG---FVFETFDLLRKMWMEEELME 413
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
++E + ++L AC L +H + + ++ + + I YAKC L A V
Sbjct: 414 VNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHV 473
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F + +++W+A+IGG+AQ G +A+D + +M G++P + + +L A +
Sbjct: 474 FFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLL 533
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G+++H +++ G +FVA ++L Y C F+ M + + V WNA+++G+
Sbjct: 534 QYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGY 593
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ EA+ L + ML +G P+ ++IL S + A+ GK+ HC +K +
Sbjct: 594 SQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDN 653
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +L+DMYAK G L ++++F+ L+ K + SWN M+ G+ HG G +A+E++ M+ +
Sbjct: 654 FVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRS 713
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
+P+ TF+GVL AC H GLV EG +Y M + + P ++H A V+ + G+
Sbjct: 714 DKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNE 773
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
A FI P EP+ +W LLS T+ DL +G AEK+L+ + ++I+LSN+YA
Sbjct: 774 ALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYAT 833
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
A WD VR+ MK+ SL+KD GCSW EL+ K++ F + ++ ++ N+L
Sbjct: 834 AGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQ 893
Query: 655 LFDGGYVPD 663
+ + GY PD
Sbjct: 894 IVEIGYTPD 902
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 113/210 (53%), Gaps = 10/210 (4%)
Query: 297 GRQLHSLIIKMGFSSFTFVANT-VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
GR+L ++ S FV NT ++ YS C ES FD + ++ WNAL++G++
Sbjct: 126 GRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYV 185
Query: 356 ASCHYGEAI----ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
+ Y EAI EL+ F+ P+ +T+ ++ + I GK H VK G
Sbjct: 186 RNELYDEAIHTFLELISVTEFQ---PDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLI 242
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
++ +G+A++ +Y KCG L++A ++FD + +NL+SWN+++ G++++G EA + +
Sbjct: 243 MDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSL 302
Query: 472 QE--NKIKPNDNTFIGVLSACVHIGLVEEG 499
E + + P+ T + +L C G V+ G
Sbjct: 303 LESGDGLIPDVATMVTLLPVCSGEGNVDVG 332
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 8/251 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G N LL +Y S+ + F+ M ++N + W+A++SG+SQ +P A
Sbjct: 543 VLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEA 602
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR M+ LEP+ + AC+ GKE+H ++ L ++ V+ L++M
Sbjct: 603 LSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDM 662
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L +Q +F+ + SW +++ + G+ +++F ++S F+
Sbjct: 663 YAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTF 722
Query: 181 ASVLGACAVLGNLKVGM----QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
VL AC G + G+ Q+ +L +K E + + +I++ + +L+ A +
Sbjct: 723 LGVLQACCHAGLVSEGLNYLAQMQTL-YKLEPELEHYAC--VIDMLGRAGRLNEALNFIN 779
Query: 237 NI-QLPDLTAW 246
+ + PD W
Sbjct: 780 EMPEEPDAKIW 790
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/638 (33%), Positives = 323/638 (50%), Gaps = 70/638 (10%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
++ H + ++GL ++H++ L++ Y + A V D E N S+ +L+ ++ +
Sbjct: 33 RQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKF 92
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
+ H L F G+ S + ACA L LK Q+H + + D FV
Sbjct: 93 HQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQ 152
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L+++Y KC ++ A RVF + PD+ +WSAL+ YA+ G EA LF +M SG+
Sbjct: 153 SSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQ 212
Query: 276 PSEV-----------------------------------TFSYVLGAFADVKETIGGRQL 300
P+ + T S VL A D+++ + G +
Sbjct: 213 PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILI 272
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG------- 353
H +IK G S V++ ++D Y KC E + FD+MD DV S NA I G
Sbjct: 273 HGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQV 332
Query: 354 ------------------------HLASCHYG----EAIELLKDMLFEGHCPNLYTYSNI 385
+A C EA+EL ++M G PN T +
Sbjct: 333 ESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCL 392
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L +I A+ GK HC ++ G ++V +GSAL+DMYAKCGR+ +R FD + +KNL
Sbjct: 393 LPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNL 452
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
V WN ++ GYA HG +EA+EI+ +MQ + KP+ +F VLSAC GL EEG +YFNS
Sbjct: 453 VCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNS 512
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
M +GI R++H A +V L + G+ +AY I+ P+ P+ VW LLS C+ H ++
Sbjct: 513 MSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVS 572
Query: 566 LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQ 625
LG AAEK+ +P + +I+LSN+YA MW+E +VR +MK K L+K+ GCSW E++
Sbjct: 573 LGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVK 632
Query: 626 NKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
NK+H + Q + E +++LS+ + GY P+
Sbjct: 633 NKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPE 670
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 134/524 (25%), Positives = 231/524 (44%), Gaps = 72/524 (13%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + LL Y DA + D +PE NV S+S LI FS+ A
Sbjct: 39 ILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHA 98
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ L P+ AV ACA + +++HG SG + +S V + L++M
Sbjct: 99 LSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHM 158
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA------ 174
Y KC + A VFD E + +SW +L+++Y + G ++F SGV
Sbjct: 159 YIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISW 218
Query: 175 ---ISEF--------------------------SCASVLGACAVLGNLKVGMQIHSLVFK 205
I+ F + +SVL A L +L +G+ IH V K
Sbjct: 219 NGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIK 278
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNI--------------------------- 238
L DK V+ LI++Y KC S+VF +
Sbjct: 279 QGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRL 338
Query: 239 --QLPD------LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
QL D + +W+++I +Q G+ EA++LF +M +G+ P+ VT +L A +
Sbjct: 339 FRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGN 398
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ + G+ H ++ G S+ +V + ++D Y+KC ++ S FD + ++V WNA+
Sbjct: 399 IAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAV 458
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPG 409
IAG+ EA+E+ M G P++ +++ +L+ S E G + K G
Sbjct: 459 IAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYG 518
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
++ V + +V + ++ G+L A + + + + W +L
Sbjct: 519 IEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALL 562
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 189/427 (44%), Gaps = 48/427 (11%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER----NVISWSALISGFSQIGMPEVAL 61
F P+V++++ L+ Y + +++A++LF EM + N+ISW+ +I+GF+ G+ A+
Sbjct: 176 FEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAV 235
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M EP+ T + A D G IHG + + GL + VS+ LI+MY
Sbjct: 236 LMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMY 295
Query: 122 GKCGLLSSAQFVFDA-----------------------------------SLERNSISWV 146
GKC S VFD +E N +SW
Sbjct: 296 GKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWT 355
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
S+++ Q G + L++F + +GV + + +L AC + L G H +
Sbjct: 356 SMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRR 415
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
+ D +V LI++YAKC ++ + F I +L W+A+I GYA GKA EA+++F
Sbjct: 416 GISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIF 475
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKET-IGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
M SG P ++F+ VL A + T G +S+ K G + ++ S+
Sbjct: 476 DLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSR 535
Query: 326 CELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAI---ELLKDMLFEGHCPNLYT 381
LE++ M D W AL L+SC + E+ + LFE N
Sbjct: 536 AGKLEQAYAMIRRMPVNPDACVWGAL----LSSCRVHNNVSLGEVAAEKLFELEPSNPGN 591
Query: 382 YSNILNI 388
Y + NI
Sbjct: 592 YILLSNI 598
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 3/175 (1%)
Query: 384 NILN-ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
ILN ++S ++ +Q H I+K G ++ + + L+ YA DA V D +
Sbjct: 17 TILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPE 76
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
N+ S++T++ +++ AL +S M + P++ + AC + ++
Sbjct: 77 PNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPA-RQ 135
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ + G +S+VH++ Q R A+ EP+ V W L++
Sbjct: 136 VHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAA 189
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/643 (32%), Positives = 360/643 (55%), Gaps = 3/643 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEVALNYFRLMVCCVLEP 74
L+ MY KF DA ++F E+ ++ NV+ W+ +I GF + E +L + L ++
Sbjct: 710 LIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSVKL 769
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
++ GA+ AC+ ++ G++IH + + GL+ + +VS L++MY KCG++ A+ VF
Sbjct: 770 VSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVF 829
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
+++ W +++++Y + L++F R+ V F+ ++V+ C++ G
Sbjct: 830 SCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYD 889
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G +H+ +FK ++ + L+ LY+KC A VF +++ D+ AW +LI G
Sbjct: 890 YGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLC 949
Query: 255 QLGKACEAIDLF--VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
+ GK EA+ +F +K L P + V+ A A ++ G Q+H +IK G
Sbjct: 950 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLN 1009
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
FV ++++D YSKC L E +LK F M ++V+WN++I+ + + +IEL ML
Sbjct: 1010 VFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLS 1069
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+G P+ + +++L S ++ GK H ++ G S+ + +AL+DMY KCG
Sbjct: 1070 QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKY 1129
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A +F + K+L++WN M+ GY HG R AL ++ +++ P+D TF+ ++SAC H
Sbjct: 1130 AENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNH 1189
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
G VEEG ++F M +D+GI P+M+H A++V L G+ AY FIK+ P E + +W
Sbjct: 1190 SGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWL 1249
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
CLLS +TH ++ LG +AEK+L +PE S ++ L N+Y EA + +E AK+ MKE+
Sbjct: 1250 CLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMKERG 1309
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
L+K GCSW E+ + + F + + ++ +V+N+L ++
Sbjct: 1310 LQKQPGCSWIEVSDISNVFFSGGSSSPIKAEIFKVLNRLKSNM 1352
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/499 (27%), Positives = 251/499 (50%), Gaps = 15/499 (3%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
+T+ + AC+S + SGK IHG + G + ++ L+NMY KCG L A VFD
Sbjct: 562 FTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 621
Query: 137 SLE-----RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
+ R+ S++ Y + G+ F GV FS + V+ G
Sbjct: 622 WSQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEG 681
Query: 192 NLKV--GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-LPDLTAWSA 248
N + G QIH + + +L+ D F+ LI++Y K A RVF I+ ++ W+
Sbjct: 682 NFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNV 741
Query: 249 LIGGYAQLGKACE-AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+I G+ + CE +++L++ S+ + +F+ LGA + + + GRQ+H ++KM
Sbjct: 742 MIVGFGG-SEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKM 800
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
G + +V+ ++L YSKC ++ E+ F + + + WNA++A ++ + + A+EL
Sbjct: 801 GLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELF 860
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M + P+ +T SN+++ S ++GK H + K S I SAL+ +Y+KC
Sbjct: 861 GFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKC 920
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ--ENKIKPNDNTFIG 485
G DA VF + K++V+W +++ G ++G +EAL+++ M+ ++ +KP+ +
Sbjct: 921 GCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTS 980
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
V++AC + + G SMI+ G + +S++ L++ G A + S E
Sbjct: 981 VINACAGLEALSFGLQVHGSMIKT-GQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPE 1039
Query: 546 PNKVVWRCLLSGCKTHKDL 564
N V W ++S C + +L
Sbjct: 1040 -NIVAWNSMIS-CYSRNNL 1056
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 206/422 (48%), Gaps = 18/422 (4%)
Query: 154 QCGEHVHGLKIFLL-SRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
Q GE++ L ++ S + S F+ S+L AC+ L NL G IH + +D
Sbjct: 537 QKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDP 596
Query: 213 FVAMGLINLYAKCEKLDLASRVF-----SNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
F+A L+N+Y KC LD A +VF S + D+T +++I GY + + E + F
Sbjct: 597 FIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFR 656
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVK--ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
+M G+ P + S V+ G+Q+H +++ +F+ ++D Y K
Sbjct: 657 RMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFK 716
Query: 326 CELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY--TY 382
L ++ + F E+ D+ +VV WN +I G S ++EL ML + + L ++
Sbjct: 717 FGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELY--MLAKSNSVKLVSTSF 774
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+ L S +G+Q HC +VK G D++ + ++L+ MY+KCG + +A VF +
Sbjct: 775 TGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVD 834
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
K L WN M+ Y ++ G ALE++ M++ + P+ T V+S C GL + G
Sbjct: 835 KRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSV 894
Query: 503 FNSMI-RDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG-CKT 560
+ R +P ++ ++++ L++ G AY KS E + V W L+SG CK
Sbjct: 895 HAELFKRPIQSTPAIE--SALLTLYSKCGCDTDAYLVFKSME-EKDMVAWGSLISGLCKN 951
Query: 561 HK 562
K
Sbjct: 952 GK 953
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI +G NV + L+ +Y K A K+F M N+++W+++IS +S+ +PE++
Sbjct: 1001 MIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELS 1060
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F LM+ + P+ + + A +S GK +HG R G+ ++H+ N LI+M
Sbjct: 1061 IELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDM 1120
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG A+ +F ++ I+W ++ Y G+ L +F +K+G + +
Sbjct: 1121 YVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTF 1180
Query: 181 ASVLGAC 187
S++ AC
Sbjct: 1181 LSLISAC 1187
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/671 (32%), Positives = 351/671 (52%), Gaps = 5/671 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF ++ L I A+ +F + +V ++ L+ GFS P +
Sbjct: 43 IVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSS 102
Query: 61 LNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L F L L+PN TY A+SA + D R+G IHG+ G + + + ++
Sbjct: 103 LAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVK 162
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEF 178
MY K + A+ VFD E+++I W +++S Y + +V +++F L +S +
Sbjct: 163 MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT 222
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +L A A L L++GMQIHSL K +V G I+LY+KC K+ +AS +F
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREF 282
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ PD+ A++A+I GY G+ ++ LF ++ SG T ++ +
Sbjct: 283 RRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYA-- 340
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H +K F S T V+ + YSK +E + K FDE E + SWNA+I+G+ +
Sbjct: 341 -IHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+AI L ++M PN T + IL+ + + A+ GK H + F+S++ + +
Sbjct: 400 LTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 459
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+ MYAKCG + +AR++FD + KN V+WNTM+ GY HG G+EAL I+S M + I P
Sbjct: 460 ALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAP 519
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
TF+ VL AC H GLV+EG FNSMI +G P + H A VV + G +RA +F
Sbjct: 520 TPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQF 579
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I++ PI+P VW LL C+ HKD L R +EK+ DP++ H++LSN+++ +
Sbjct: 580 IEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNY 639
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
+ A VR+ K++ L K G + E+ H F++ + Q +HE + +L + +
Sbjct: 640 PQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREA 699
Query: 659 GYVPDPIYSSH 669
GY P+ + H
Sbjct: 700 GYQPETELALH 710
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/571 (33%), Positives = 320/571 (56%), Gaps = 1/571 (0%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
R GK++H + +G + ++N L+NMY KCG L A +FD +RN +SW +++S
Sbjct: 22 RRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGL 81
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
Q + ++ F R G ++F+ +S + ACA LG++++G Q+H L K + +
Sbjct: 82 SQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSEL 141
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
FV L ++Y+KC + A +VF + D +W+A+I GY+++G+ EA+ F KM
Sbjct: 142 FVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDE 201
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
+ + LGA +K GR +HS ++K+GF S FV N + D YSK +E +
Sbjct: 202 EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESA 261
Query: 333 LKTFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
F E +VVS+ LI G++ + + + + ++ +G PN +T+S+++ ++
Sbjct: 262 SNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN 321
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
A+E G Q H ++K FD + + S LVDMY KCG L A + FD + ++WN++
Sbjct: 322 QAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSL 381
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
+ + QHGLG++A++I+ M + +KPN TFI +L+ C H GLVEEG YF SM + +G
Sbjct: 382 VSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYG 441
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA 571
+ P +H + V+ L G+ + A EFI P EPN W L C+ H D +G+ AA
Sbjct: 442 VVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAA 501
Query: 572 EKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
EK++ +P+++ A ++LSN+YA W++ VR M++ ++KK G SW ++ K H F
Sbjct: 502 EKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVF 561
Query: 632 STSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
++ + ++E ++ L + GYVP
Sbjct: 562 GAEDWSHPRKSAIYEKLDTLLDQIKAAGYVP 592
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 255/497 (51%), Gaps = 17/497 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G+ P NHL+ MY K ++ A KLFD MP+RN++SW+A+ISG SQ A
Sbjct: 31 LICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEA 90
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M C P + + A+ ACAS G GK++H + G+ V + L +M
Sbjct: 91 IRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDM 150
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A VF+ ++ +SW +++ Y + GE L F V I +
Sbjct: 151 YSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVL 210
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS-NIQ 239
S LGAC L K G +HS V K E D FV L ++Y+K ++ AS VF + +
Sbjct: 211 CSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSE 270
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +++ LI GY + + + + +FV++ G+ P+E TFS ++ A A+ G Q
Sbjct: 271 CRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQ 330
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH+ ++K+ F FV++ ++D Y KC LLE++++ FDE+ + ++WN+L++
Sbjct: 331 LHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGL 390
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG-- 417
+AI++ + M+ G PN T+ ++L S +E G + K VV G
Sbjct: 391 GKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKT---YGVVPGEE 447
Query: 418 --SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMM 471
S ++D+ + GRL +A++ + + N W + L HG +G+ A E
Sbjct: 448 HYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAE----- 502
Query: 472 QENKIKPNDNTFIGVLS 488
+ K++P ++ + +LS
Sbjct: 503 KLVKLEPKNSGALVLLS 519
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 207/419 (49%), Gaps = 35/419 (8%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A V+ A L+ G Q+H+L+ F+ L+N+Y+KC +LD A ++F +
Sbjct: 9 AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ 68
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L +W+A+I G +Q K EAI F M G +P++ FS + A A + G+Q+
Sbjct: 69 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L +K G S FV + + D YSKC + ++ K F+EM D VSW A+I G+ +
Sbjct: 129 HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEF 188
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ K M+ E + + + L + A ++G+ H +VK GF+S++ +G+AL
Sbjct: 189 EEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNAL 248
Query: 421 VDMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
DMY+K G + A VF S +N+VS+ ++ GY + + L ++ ++ I+PN
Sbjct: 249 TDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPN 308
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIR-----DHGISPRM-----------------D 517
+ TF ++ AC + +E+G +++ D +S + D
Sbjct: 309 EFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFD 368
Query: 518 HIA--------SVVHLFACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
I S+V +F G + A +E + ++PN + + LL+GC +H LV
Sbjct: 369 EIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGC-SHAGLV 426
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/658 (32%), Positives = 357/658 (54%), Gaps = 17/658 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF T N +L Y+K ++ A +FD M R+ +SW+ +I G G + L +F
Sbjct: 65 GFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWF 124
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R EPN T V A+ AC S G G ++HG + RSG V N L++MY
Sbjct: 125 RQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD- 183
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASV 183
+ A+ +FD ER+ ISW ++ Y Q GE L++FL ++ + + + + SV
Sbjct: 184 NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSV 243
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L ACA G++ +G +H +V L++D FV +I++Y+KC+ + A + F+ + +
Sbjct: 244 LKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNT 303
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+++I G + K EA+ LF M +G EVT +L + + + +HS+
Sbjct: 304 VSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSI 363
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+I+ G+ FV N+++D YSKC+L+E + K FD + D VSW+A+IAG EA
Sbjct: 364 VIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEA 423
Query: 364 IELLKDMLFEGHCPNLYTYSNIL---NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
I L ++M PN T ++L ++S+D+ +W H ++ G + V +G+A+
Sbjct: 424 IALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWA---HGIAIRRGLAAEVAVGTAI 480
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMYAKCG + +RK FD + KN+VSW M+ +GL R+AL + S M+ + +KPN
Sbjct: 481 LDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNV 540
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
T + VLSAC H GLVEEG +F +M++DHG+ P ++H + +V + + G+ A I+
Sbjct: 541 VTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIE 600
Query: 541 SSP--IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
P + +W LLS C++ + LG AA ++L +P+ ++ + + S++YA + +W
Sbjct: 601 KMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLW 660
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF-----STSRFAQFQGI--DLHEVMN 649
+ A++R ++K + ++ G S +++K F S R + G+ LH+ M
Sbjct: 661 ADAARMRWLVKARGVRVVAGYSLVHVEDKAWRFVAGDESHPRAGEIWGVVEQLHDCMK 718
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G ++ N ++ MY K A K F+EMP RN +SW+++ISG + A
Sbjct: 263 VICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEA 322
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M + T V + +C D K IH + R G ELN V N LI+
Sbjct: 323 LSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDA 382
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC L+ A +FD ++++SW ++++ + CG+ + +F ++ + +
Sbjct: 383 YSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTI 442
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L A +V +LK H + + L + V ++++YAKC ++ L+ + F I
Sbjct: 443 LSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPE 502
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
++ +W A+I G A +A+ L +M GL P+ VT VL A
Sbjct: 503 KNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSA 549
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%)
Query: 404 CIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGRE 463
C PGFDS G++++D Y K G L+ A VFD + S++ VSWN M+ G+ G +
Sbjct: 60 CSSLPGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDK 119
Query: 464 ALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
L + + +PN +T + + AC +G +EEG +IR
Sbjct: 120 GLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIR 164
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/669 (31%), Positives = 357/669 (53%), Gaps = 10/669 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G ++ N ++ +Y K +++A +LFD+MPE+N+ISW++LI GFS+ G A
Sbjct: 237 VKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAY 296
Query: 62 NYFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
FR ++ L P+ T V + C+ G+ G IHG + GL V N LI+
Sbjct: 297 RAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALID 356
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK-----SGVA 174
MY KCG LS A +F ++ +SW S++ +Y + G + F L RK +
Sbjct: 357 MYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREG---FVFETFDLLRKMWMEEELME 413
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
++E + ++L AC L +H + + ++ + + I YAKC L A V
Sbjct: 414 VNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHV 473
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F + +++W+A+IGG+AQ G +A+D + +M G++P + + +L A +
Sbjct: 474 FFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLL 533
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G+++H +++ G +FVA ++L Y C F+ M + + V WNA+++G+
Sbjct: 534 QYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGY 593
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ EA+ L + ML +G P+ ++IL S + A+ GK+ HC +K +
Sbjct: 594 SQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDN 653
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +L+DMYAK G L ++++F+ L+ K + SWN M+ G+ HG G +A+E++ M+ +
Sbjct: 654 FVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRS 713
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
+P+ TF+GVL AC H GLV EG +Y M + + P ++H A V+ + G+
Sbjct: 714 DKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNE 773
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
A FI P EP+ +W LLS T+ DL +G AEK+L+ + ++I+LSN+YA
Sbjct: 774 ALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYAT 833
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
A WD VR+ MK+ SL+KD GCSW EL+ K++ F + ++ ++ N+L
Sbjct: 834 AGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQ 893
Query: 655 LFDGGYVPD 663
+ + GY PD
Sbjct: 894 IVEIGYTPD 902
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 113/210 (53%), Gaps = 10/210 (4%)
Query: 297 GRQLHSLIIKMGFSSFTFVANT-VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
GR+L ++ S FV NT ++ YS C ES FD + ++ WNAL++G++
Sbjct: 126 GRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYV 185
Query: 356 ASCHYGEAI----ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
+ Y EAI EL+ F+ P+ +T+ ++ + I GK H VK G
Sbjct: 186 RNELYDEAIHTFLELISVTEFQ---PDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLI 242
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
++ +G+A++ +Y KCG L++A ++FD + +NL+SWN+++ G++++G EA + +
Sbjct: 243 MDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSL 302
Query: 472 QE--NKIKPNDNTFIGVLSACVHIGLVEEG 499
E + + P+ T + +L C G V+ G
Sbjct: 303 LESGDGLIPDVATMVTLLPVCSGEGNVDVG 332
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 8/251 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G N LL +Y S+ + F+ M ++N + W+A++SG+SQ +P A
Sbjct: 543 VLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEA 602
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR M+ LEP+ + AC+ GKE+H ++ L ++ V+ L++M
Sbjct: 603 LSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDM 662
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L +Q +F+ + SW +++ + G+ +++F ++S F+
Sbjct: 663 YAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTF 722
Query: 181 ASVLGACAVLGNLKVGM----QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
VL AC G + G+ Q+ +L +K E + + +I++ + +L+ A +
Sbjct: 723 LGVLQACCHAGLVSEGLNYLAQMQTL-YKLEPELEHYAC--VIDMLGRAGRLNEALNFIN 779
Query: 237 NI-QLPDLTAW 246
+ + PD W
Sbjct: 780 EMPEEPDAKIW 790
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/667 (29%), Positives = 360/667 (53%), Gaps = 9/667 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G ++ L+ +Y ++ ++ FD++P+++V +W+++IS + G A
Sbjct: 142 LVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEA 201
Query: 61 LN-YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ +++L++ + P++YT+ + AC + D G++IH ++ G + N V+ LI+
Sbjct: 202 IGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIH 258
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY + G A+ +FD R+ SW +++S Q G L + R G+ ++ +
Sbjct: 259 MYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVT 318
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L C LG++ M IH V K LEFD FV+ LIN+YAK L+ A + F +
Sbjct: 319 VVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMF 378
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ D+ +W+++I Y Q A FVKM +G P +T + A ++ R
Sbjct: 379 ITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRS 438
Query: 300 LHSLIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H I++ G+ + N V+D Y+K LL+ + K F+ + DV+SWN LI G+ +
Sbjct: 439 VHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNG 498
Query: 359 HYGEAIELLKDMLFEGH--CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
EAIE+ K M+ E PN T+ +IL + + A++ G + H ++K +V +
Sbjct: 499 LASEAIEVYK-MMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFV 557
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ L+D+Y KCGRL DA +F + ++ V+WN ++ + HG + L+++ M + +
Sbjct: 558 ATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGV 617
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+ TF+ +LSAC H G VEEG F +++++GI P + H +V L G AY
Sbjct: 618 KPDHVTFVSLLSACSHSGFVEEGKWCFR-LMQEYGIKPSLKHYGCMVDLLGRAGYLEMAY 676
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+FIK P++P+ +W LL C+ H ++ LG++A++++ D ++ +++LSN+YA
Sbjct: 677 DFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVG 736
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W+ KVR + +E+ LKK G S E+ K+ F T + + +++E + L+ +
Sbjct: 737 KWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMK 796
Query: 657 DGGYVPD 663
GY+PD
Sbjct: 797 SLGYIPD 803
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 152/535 (28%), Positives = 268/535 (50%), Gaps = 18/535 (3%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
K +H + +G + +S L+N+Y G +S ++ FD +++ +W S++S+Y
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194
Query: 155 CGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
G + F L S + ++ VL AC G L G +IH FK +++ F
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVF 251
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
VA LI++Y++ +A +F ++ D+ +W+A+I G Q G A +A+D+ +M G
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ + VT +L + + +H +IK G FV+N +++ Y+K LE++
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
K F +M DVVSWN++IA + + A M G P+L T ++ +I +
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431
Query: 394 AIEWGKQTHCCIVKPGF-DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+ + H I++ G+ +VVIG+A+VDMYAK G L+ A KVF+ + K+++SWNT++
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLI 491
Query: 453 VGYAQHGLGREALEIYSMMQENK-IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
GYAQ+GL EA+E+Y MM+E K I PN T++ +L A H+G +++G +I+
Sbjct: 492 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIK--- 548
Query: 512 ISPRMDHIAS--VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS--GCKTHKDLVLG 567
+ +D + ++ ++ G+ A P E + V W ++S G H + L
Sbjct: 549 TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCHGIHGHAEKTLK 607
Query: 568 RYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK---KDTGC 619
+ P D + L + + + +E ++M+E +K K GC
Sbjct: 608 LFGEMLDEGVKP-DHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC 661
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 145/289 (50%), Gaps = 9/289 (3%)
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
E+ F+++ F +T + LH+L++ G F++ +++ Y+ + S TFD
Sbjct: 119 EIDFNFL---FDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFD 175
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIE 396
++ + DV +WN++I+ ++ + H+ EAI +L P+ YT+ +L +
Sbjct: 176 QIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD-- 233
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G++ HC K GF NV + ++L+ MY++ G AR +FD + +++ SWN M+ G
Sbjct: 234 -GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLI 292
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
Q+G +AL++ M+ IK N T + +L C +G + +I+ HG+ +
Sbjct: 293 QNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIK-HGLEFDL 351
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
++++++A G A + + I + V W +++ + + D V
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFIT-DVVSWNSIIAAYEQNDDPV 399
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/638 (33%), Positives = 323/638 (50%), Gaps = 70/638 (10%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
++ H + ++GL ++H++ L++ Y + A V D E N S+ +L+ ++ +
Sbjct: 33 RQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKF 92
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
+ H L F G+ S + ACA L LK Q+H + + D FV
Sbjct: 93 HQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQ 152
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L+++Y KC ++ A RVF + PD+ +WSAL+ YA+ G EA LF +M SG+
Sbjct: 153 SSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQ 212
Query: 276 PSEV-----------------------------------TFSYVLGAFADVKETIGGRQL 300
P+ + T S VL A D+++ + G +
Sbjct: 213 PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILI 272
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG------- 353
H +IK G S V++ ++D Y KC E + FD+MD DV S NA I G
Sbjct: 273 HGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQV 332
Query: 354 ------------------------HLASCHYG----EAIELLKDMLFEGHCPNLYTYSNI 385
+A C EA+EL ++M G PN T +
Sbjct: 333 ESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCL 392
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L +I A+ GK HC ++ G ++V +GSAL+DMYAKCGR+ +R FD + +KNL
Sbjct: 393 LPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNL 452
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
V WN ++ GYA HG +EA+EI+ +MQ + KP+ +F VLSAC GL EEG +YFNS
Sbjct: 453 VCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNS 512
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
M +GI R++H A +V L + G+ +AY I+ P+ P+ VW LLS C+ H ++
Sbjct: 513 MSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVS 572
Query: 566 LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQ 625
LG AAEK+ +P + +I+LSN+YA MW+E +VR +MK K L+K+ GCSW E++
Sbjct: 573 LGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVK 632
Query: 626 NKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
NK+H + Q + E +++LS+ + GY P+
Sbjct: 633 NKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPE 670
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 139/541 (25%), Positives = 236/541 (43%), Gaps = 75/541 (13%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + LL Y DA + D +PE NV S+S LI FS+ A
Sbjct: 39 ILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHA 98
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ L P+ AV ACA + +++HG SG + +S V + L++M
Sbjct: 99 LSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHM 158
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA------ 174
Y KC + A VFD E + +SW +L+++Y + G ++F SGV
Sbjct: 159 YIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISW 218
Query: 175 ---ISEF--------------------------SCASVLGACAVLGNLKVGMQIHSLVFK 205
I+ F + +SVL A L +L +G+ IH V K
Sbjct: 219 NGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIK 278
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNI--------------------------- 238
L DK V+ LI++Y KC S+VF +
Sbjct: 279 QGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRL 338
Query: 239 --QLPD------LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
QL D + +W+++I +Q G+ EA++LF +M +G+ P+ VT +L A +
Sbjct: 339 FRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGN 398
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ + G+ H ++ G S+ +V + ++D Y+KC ++ S FD + ++V WNA+
Sbjct: 399 IAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAV 458
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPG 409
IAG+ EA+E+ M G P++ +++ +L+ S E G + K G
Sbjct: 459 IAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYG 518
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREAL 465
++ V + +V + ++ G+L A + + + + W +L H LG A
Sbjct: 519 IEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAA 578
Query: 466 E 466
E
Sbjct: 579 E 579
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 189/427 (44%), Gaps = 48/427 (11%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER----NVISWSALISGFSQIGMPEVAL 61
F P+V++++ L+ Y + +++A++LF EM + N+ISW+ +I+GF+ G+ A+
Sbjct: 176 FEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAV 235
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M EP+ T + A D G IHG + + GL + VS+ LI+MY
Sbjct: 236 LMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMY 295
Query: 122 GKCGLLSSAQFVFDA-----------------------------------SLERNSISWV 146
GKC S VFD +E N +SW
Sbjct: 296 GKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWT 355
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
S+++ Q G + L++F + +GV + + +L AC + L G H +
Sbjct: 356 SMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRR 415
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
+ D +V LI++YAKC ++ + F I +L W+A+I GYA GKA EA+++F
Sbjct: 416 GISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIF 475
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKET-IGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
M SG P ++F+ VL A + T G +S+ K G + ++ S+
Sbjct: 476 DLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSR 535
Query: 326 CELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAI---ELLKDMLFEGHCPNLYT 381
LE++ M D W AL L+SC + E+ + LFE N
Sbjct: 536 AGKLEQAYAMIRRMPVNPDACVWGAL----LSSCRVHNNVSLGEVAAEKLFELEPSNPGN 591
Query: 382 YSNILNI 388
Y + NI
Sbjct: 592 YILLSNI 598
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
+T N LN S ++ +Q H I+K G ++ + + L+ YA DA V D
Sbjct: 16 HTIFNCLN--STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDL 73
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ N+ S++T++ +++ AL +S M + P++ + AC + ++
Sbjct: 74 VPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPA 133
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ + G +S+VH++ Q R A+ EP+ V W L++
Sbjct: 134 -RQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAA 189
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 224/680 (32%), Positives = 360/680 (52%), Gaps = 47/680 (6%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ MY K I+ A+++FDE+ R+ +SW+++I+ + E+A++ FRLM+ +
Sbjct: 124 NSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVG 183
Query: 74 PNYYTYVGAVSACASRGDARS-GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P +T V AC++ + GK++H + R+G + + +N L+ MY K G + A+
Sbjct: 184 PTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKT 242
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
+FD +++ +SW +++SS Q L + +SGV + + ASVL AC+ L
Sbjct: 243 LFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEM 302
Query: 193 LKVGMQIHSLVF-KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
L G +IH+ V L + FV L+++Y C++ + VF + + W+A+I
Sbjct: 303 LGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIA 362
Query: 252 GYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
GY + EAI+LFV+M F GL P+ VT S VL A + + +HS ++K GF
Sbjct: 363 GYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFE 422
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
+V N ++D YS+ +E + F M+ D+VSWN +I G++ + +A+ LL DM
Sbjct: 423 KDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDM 482
Query: 371 ----------LFEGH--------CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
F+ + PN T +L + + A+ GK+ H VK
Sbjct: 483 QRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSK 542
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+V +GSALVDMYAKCG LN +R VF+ +S +N+++WN +++ Y HG G EAL+++ M
Sbjct: 543 DVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMV 602
Query: 473 E-----NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA 527
E +I+PN+ T+I + ++ H G+V+EG + F +M HGI P DH A +V L
Sbjct: 603 EEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLG 662
Query: 528 CRGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI 586
GQ AY IK+ P KV W LL CK H++L +G AA+ + DP
Sbjct: 663 RSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDP------- 715
Query: 587 MLSNVYAEANMWDETAK---VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGID 643
N+ D K + + MKEK ++K+ GCSW E +++H F + Q +
Sbjct: 716 ---------NVLDYGTKQSMLGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKE 766
Query: 644 LHEVMNQLSVHLFDGGYVPD 663
+HE + LS+ + GYVPD
Sbjct: 767 VHEYLETLSLRMKKEGYVPD 786
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 141/461 (30%), Positives = 239/461 (51%), Gaps = 22/461 (4%)
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
A++ + MV + P+ + + + A A D GK++H +++ G L + V N L+N
Sbjct: 69 AISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVN 128
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MYGKCG + +A+ VFD R+ +SW S++++ C+ E + +F L V + F+
Sbjct: 129 MYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFT 188
Query: 180 CASVLGACAVLGN-LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
SV AC+ L N L +G Q+H+ V + ++ F L+ +YAK ++ A +F
Sbjct: 189 LVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVF 247
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
DL +W+ +I +Q + EA+ M SG+ P+ VT + VL A + ++ G+
Sbjct: 248 DDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGK 307
Query: 299 QLHSLII-KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
++H+ ++ +FV ++D Y C+ E+ FD M + WNA+IAG++ +
Sbjct: 308 EIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRN 367
Query: 358 CHYGEAIELLKDMLFE-GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
EAIEL +M+FE G PN T S++L + + H C+VK GF+ + +
Sbjct: 368 EFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYV 427
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ---- 472
+AL+DMY++ GR+ AR +F ++ K++VSWNTM+ GY G +AL + MQ
Sbjct: 428 QNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQA 487
Query: 473 -----------ENK---IKPNDNTFIGVLSACVHIGLVEEG 499
+NK +KPN T + VL C + + +G
Sbjct: 488 EHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKG 528
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 229/491 (46%), Gaps = 32/491 (6%)
Query: 12 TYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
T N L+ MY K R+ +A+ LFD +++++SW+ +IS SQ E AL Y +M+
Sbjct: 223 TNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSG 282
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHG-RMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
+ PN T + AC+ GKEIH + + L NS V L++MY C
Sbjct: 283 VRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKG 342
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAV 189
+ VFD R W ++++ Y + +++F+ + + G++ + + +SVL AC
Sbjct: 343 RLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVR 402
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
+ IHS V K E DK+V L+++Y++ ++++A +F ++ D+ +W+ +
Sbjct: 403 CESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTM 462
Query: 250 IGGYAQLGKACEAIDLFVKMFSS------------------GLMPSEVTFSYVLGAFADV 291
I GY G+ +A++L M L P+ VT VL A +
Sbjct: 463 ITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAAL 522
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
G+++H+ +K S V + ++D Y+KC L S F++M +V++WN LI
Sbjct: 523 AALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLI 582
Query: 352 AGHLASCHYGEAIELLKDMLFEGHC-----PNLYTYSNILNISSDIPAIEWGKQT-HCCI 405
+ EA++L + M+ EG PN TY I S ++ G +
Sbjct: 583 MAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMK 642
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGRE 463
K G + + LVD+ + G++ +A + + S K + +W+++L H +
Sbjct: 643 AKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIH----Q 698
Query: 464 ALEIYSMMQEN 474
LEI + +N
Sbjct: 699 NLEIGEIAAKN 709
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 135/240 (56%), Gaps = 8/240 (3%)
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
+AI + M ++G+ P F VL A A +++ G+QLH+ + K G + T V N+++
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE---AIELLKDMLFEGHCP 377
+ Y KC ++ + + FDE+ D VSWN++I A+C + E A+ L + ML E P
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMIN---AACRFEEWELAVHLFRLMLLENVGP 184
Query: 378 NLYTYSNILNISSD-IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
+T ++ + S+ I + GKQ H +++ G D +ALV MYAK GR+ +A+ +
Sbjct: 185 TSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTL 243
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
FD K+LVSWNT++ +Q+ EAL +M ++ ++PN T VL AC H+ ++
Sbjct: 244 FDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEML 303
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 125/274 (45%), Gaps = 26/274 (9%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N L+ MY + RI A+ +F M ++++SW+ +I+G+ G + ALN
Sbjct: 420 GFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLL 479
Query: 65 RLMV------------------CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG 106
M L+PN T + + CA+ GKEIH +
Sbjct: 480 HDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQM 539
Query: 107 LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
L + V + L++MY KCG L+ ++ VF+ RN I+W L+ +Y G+ LK+F
Sbjct: 540 LSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFR 599
Query: 167 LSRKSG-----VAISEFSCASVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLIN 220
+ G + +E + ++ + + G + G+ + +++ K +E L++
Sbjct: 600 RMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVD 659
Query: 221 LYAKCEKLDLASRVFSNI--QLPDLTAWSALIGG 252
L + +++ A + + + + AWS+L+G
Sbjct: 660 LLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGA 693
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 74/138 (53%)
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+S + +AI +M+ G P+ + + +L ++ I + GKQ H + K G
Sbjct: 62 SSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTA 121
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ ++LV+MY KCG ++ AR+VFD +++++ VSWN+M+ + A+ ++ +M
Sbjct: 122 VPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLEN 181
Query: 476 IKPNDNTFIGVLSACVHI 493
+ P T + V AC ++
Sbjct: 182 VGPTSFTLVSVAHACSNL 199
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/670 (31%), Positives = 348/670 (51%), Gaps = 4/670 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE-RNVISWSALISGFSQIGMPEVA 60
+ SG + + N L+ MY K ++ A ++F+ M + R+V SW++ ISG Q GM A
Sbjct: 190 VKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEA 249
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR M N YT VG + CA G+E+H + + G E N N L+ M
Sbjct: 250 LDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALLVM 308
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG + SA VF +++ ISW S+LS Y Q + + F ++G
Sbjct: 309 YARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACI 368
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L A LG L G ++H+ K L+ D +A L+++Y KC ++ ++RVF +++
Sbjct: 369 VSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRI 428
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +W+ +I YAQ + EAI F G+ + +L A + +K +Q+
Sbjct: 429 KDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQV 488
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS I+ G + N ++D Y +C + +L F+ +D+ D+V+W +++ +
Sbjct: 489 HSYAIRNGLLDL-ILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLL 547
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ L ML G P+ IL + + ++ GK+ H +++ F + S+L
Sbjct: 548 HEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSL 607
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMY+ CG +N A KVFD K++V W M+ HG G++A+ I+ M E + P+
Sbjct: 608 VDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDH 667
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
+F+ +L AC H LV+EG Y + M+ + + P +H A VV L GQT AY+FIK
Sbjct: 668 VSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIK 727
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
S P+EP VVW LL C+ HK+ L A +K+L +P++ ++++SNV+AE W+
Sbjct: 728 SMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNN 787
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL-FDGG 659
++R M E+ L+KD CSW E+ N +H F+ + +H + +++ L +G
Sbjct: 788 VKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQ 847
Query: 660 YVPDPIYSSH 669
YV D + H
Sbjct: 848 YVEDTSFVLH 857
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 174/568 (30%), Positives = 285/568 (50%), Gaps = 11/568 (1%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVC----CV 71
LL MY K R+ DA +LFD MP R V SW+ALI G A+ +R M
Sbjct: 99 LLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAG 158
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
P+ T + AC + GD R G E+HG +SGL+ ++ V+N L+ MY KCGLL SA
Sbjct: 159 AAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSAL 218
Query: 132 FVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
VF+ + R+ SW S +S Q G + L +F + G +++ ++ VL CA L
Sbjct: 219 RVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAEL 278
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
L G ++H+ + KC EF+ L+ +YA+C +D A RVF I D +W++++
Sbjct: 279 AQLNHGRELHAALLKCGTEFN-IQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSML 337
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
Y Q EAID F +M +G P +L A + I GR++H+ +K
Sbjct: 338 SCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLD 397
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S +ANT++D Y KC +E S + FD M D VSW +IA + S Y EAI +
Sbjct: 398 SDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTA 457
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
EG + +IL S + +I KQ H ++ G ++++ + ++D+Y +CG +
Sbjct: 458 QKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEV 516
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
A +F+ L K++V+W +M+ +A++GL EA+ ++ M I+P+ +G+L A
Sbjct: 517 CYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAI 576
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDH-IASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
+ + +G +IR G P ++S+V +++ G A + + + + V
Sbjct: 577 AGLSSLTKGKEIHGFLIR--GKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCK-DVV 633
Query: 550 VWRCLLSGCKTHKDLVLGRYAAEKILST 577
+W +++ H Y +++L T
Sbjct: 634 LWTAMINATGMHGHGKQAIYIFKRMLET 661
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 175/325 (53%), Gaps = 9/325 (2%)
Query: 183 VLGACAVLGNLKVGMQIHS-LVFKCALEFDK--FVAMGLINLYAKCEKLDLASRVFSNIQ 239
VL AV + G Q+H+ V AL D F+A L+ +Y KC +L A R+F +
Sbjct: 61 VLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMP 120
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS----GLMPSEVTFSYVLGAFADVKETI 295
+ +W+ALIG G A EA+ ++ M +S G P T + VL A +
Sbjct: 121 ARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGR 180
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGH 354
G ++H L +K G T VAN ++ Y+KC LL+ +L+ F+ M D DV SWN+ I+G
Sbjct: 181 CGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGC 240
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ + + EA++L + M +G N YT +L + +++ + G++ H ++K G + N+
Sbjct: 241 VQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI 300
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ LV MYA+CG ++ A +VF + K+ +SWN+ML Y Q+ L EA++ + M +N
Sbjct: 301 QCNALLV-MYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQN 359
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEG 499
P+ + +LSA H+G + G
Sbjct: 360 GFNPDHACIVSLLSAVGHLGRLING 384
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 135/279 (48%), Gaps = 10/279 (3%)
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVT-FSYVLGAFADVKETIGG 297
+LP +A ++L + G EA+ + G P + +VL A + G
Sbjct: 16 KLPPASAGASL-RQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEG 74
Query: 298 RQLHSLIIK---MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
RQLH+ + +G F+A +L Y KC L ++ + FD M V SWNALI
Sbjct: 75 RQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGAC 134
Query: 355 LASCHYGEAIELLKDML----FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
L+S GEA+ + + M G P+ T +++L G + H VK G
Sbjct: 135 LSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGL 194
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHGLGREALEIYS 469
D + ++ +ALV MYAKCG L+ A +VF+ + +++ SWN+ + G Q+G+ EAL+++
Sbjct: 195 DRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFR 254
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
MQ + N T +GVL C + + G ++++
Sbjct: 255 RMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLK 293
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/666 (31%), Positives = 355/666 (53%), Gaps = 4/666 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G +V N L+ MY K +++A K+FD MPE N++SW+++I FS+ G +
Sbjct: 172 VIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDS 231
Query: 61 LNYFRLMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ M+ L P+ T V + CA G+ G IHG + GL V+N ++
Sbjct: 232 FDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVY 291
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG--VAISE 177
MY KCG L+ AQ F + +N +SW +++S++ G+ + + G + +E
Sbjct: 292 MYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANE 351
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ +VL AC L+ ++H F+ + + ++ I YAKC L+ A +VF
Sbjct: 352 VTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVE-LSNAFILAYAKCGALNSAEKVFHG 410
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
I +++W+ALIGG+AQ G +A+ L +M SG P T S +L A A +K G
Sbjct: 411 IGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYG 470
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+++H +++ G + FV ++L Y C + FD M + ++VSWNA+I+G+ +
Sbjct: 471 KEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQN 530
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
E++ L + L EG + ++ S + A+ GK+ H ++K + +G
Sbjct: 531 GLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVG 590
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+++DMYAK G + ++RKVFD L KN+ SWN ++V + HG G+EA+E+Y M++
Sbjct: 591 CSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQM 650
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ T+IG+L AC H GLVEEG YF M + I P+++H A ++ + A G+ A
Sbjct: 651 PDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALR 710
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
+ P E + +W LL C+T L +G A+K+L +P+ +++LSN+YA
Sbjct: 711 LVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGK 770
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
WD +VR++MKE L+KD GCSW E+ +++ F Q + ++ + +L + +
Sbjct: 771 WDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISE 830
Query: 658 GGYVPD 663
GY P+
Sbjct: 831 IGYKPN 836
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 164/621 (26%), Positives = 306/621 (49%), Gaps = 18/621 (2%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGM-PEVAL 61
++ + + + L+ MY D++ +FD M +N+I W+AL+SG+++ G+ +V
Sbjct: 72 STHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVK 131
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ L+ +P+ +T+ + AC D R G+ IHG + + GL L+ V N L+ MY
Sbjct: 132 VFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMY 191
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSC 180
GKCG + A VFD E N +SW S++ ++ + G + + + + G+ +
Sbjct: 192 GKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTV 251
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++L CA G + +GM IH L K L + V ++ +Y+KC L+ A F
Sbjct: 252 VTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNN 311
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG--LMPSEVTFSYVLGAFADVKETIGGR 298
++ +W+ +I ++ G EA +L +M G + +EVT VL A D + +
Sbjct: 312 KNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLK 371
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+LH + F ++N + Y+KC L + K F + + V SWNALI GH +
Sbjct: 372 ELHGYSFRHCFQHVE-LSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNG 430
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+A+ LL M + G P+ +T S++L + + ++++GK+ H +++ G +++ +G+
Sbjct: 431 DPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGT 490
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+L+ Y CG+ + AR +FD + KNLVSWN M+ GY+Q+GL E+L ++ I+
Sbjct: 491 SLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQS 550
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA-SVVHLFA---CRGQTRR 534
++ + V AC + + G +++ + + S++ ++A C ++R+
Sbjct: 551 HEIAIVSVFGACSQLSALRLGKEAHGYVLK--ALQTEDAFVGCSIIDMYAKSGCIKESRK 608
Query: 535 AYEFIKSSPIEPNKVVWRCLL--SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
++ +K + N W ++ G H + Y K + P D +I +
Sbjct: 609 VFDGLK----DKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMP-DRFTYIGILMAC 663
Query: 593 AEANMWDETAKVRKIMKEKSL 613
A + +E K K M+ +L
Sbjct: 664 GHAGLVEEGLKYFKEMQNFNL 684
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 153/294 (52%), Gaps = 7/294 (2%)
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT-VLDFYSKCELLEESL 333
+ ++ +L A + K+ GR+LH + +V NT ++ Y+ C +S
Sbjct: 40 LQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSR 99
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDI 392
FD M+ +++ WNAL++G+ + YG+ +++ D++ + P+ +T+ +++ I
Sbjct: 100 LVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGI 159
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+ G+ H ++K G +V +G+ALV MY KCG +++A KVFD + NLVSWN+M+
Sbjct: 160 LDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMI 219
Query: 453 VGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
++++G R++ ++ M+ E + P+ T + +L C G V+ G ++ G
Sbjct: 220 CAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVK-LG 278
Query: 512 ISPRMDHIASVVHLFACRGQTRRA-YEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
+S + ++V++++ G A F+K++ N V W ++S D+
Sbjct: 279 LSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNN--NKNVVSWNTMISAFSLEGDV 330
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 206/617 (33%), Positives = 339/617 (54%), Gaps = 7/617 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N+ N L+ MY K + +A+K+FD + R+ +SW+++IS ++ G + AL+ ++ M
Sbjct: 180 NLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMD 239
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
++P+ T+ A+ AC D GK IH R+ S +E + V + LINMY +CG +S
Sbjct: 240 ADGIQPDSITFTSALLACTKLVD---GKAIHARIVSSNME-SDFVGSALINMYARCGDVS 295
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
SA+ F+ ++ + W SL+++Y Q + L ++ GV + + LGACA
Sbjct: 296 SARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACA 355
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-QLPDLTAWS 247
LG LK G IHS VF+C + V L+ +YAKC +LD A VF+ + Q ++ W+
Sbjct: 356 SLGALKEGKAIHSRVFECGFQ-SLVVHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWT 414
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A+I YAQ G EA++L+ +M + G P+E TFS VL A + + G ++H +
Sbjct: 415 AMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENS 474
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
+S V N ++ Y+KC LE + F+ D+VSWNA+I + EA++L
Sbjct: 475 ELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLY 534
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-PGFDSNVVIGSALVDMYAK 426
+ M +G P+ T ++ L+ + +++ G++ H ++K F S++++ +ALV+MY +
Sbjct: 535 QTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGR 594
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CGRL AR +F+ + ++++SW M YAQ G + L++Y M + I+PN+ TF +
Sbjct: 595 CGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSI 654
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L C H GL+ G F M +H + P +H +V L G+ R A ++S P +P
Sbjct: 655 LVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQP 714
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+ V W +L CKTH D + AA ++ DPE+TS + +LS+++ A + E +V+
Sbjct: 715 DSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQL 774
Query: 607 IMKEKSLKKDTGCSWTE 623
MKE LKK G S E
Sbjct: 775 SMKEMGLKKPPGQSLIE 791
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 176/575 (30%), Positives = 285/575 (49%), Gaps = 12/575 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE-RNVISWSALISGFSQIGMPEV 59
++ +G N N L+ MY I+ A+ F + V ++ ++S + + G+
Sbjct: 68 LLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKAVACYNQMLSAYGKNGLWNR 127
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG--LELNSHVSNCL 117
AL + M EP+ TY + +C++ G R +EIH + + + N + N L
Sbjct: 128 ALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNAL 187
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+NMYGKCG + A+ VFD R+++SW S++SSY G L ++ G+
Sbjct: 188 VNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDS 247
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ S L AC L + G IH+ + +E D FV LIN+YA+C + A + F
Sbjct: 248 ITFTSALLACTKLVD---GKAIHARIVSSNMESD-FVGSALINMYARCGDVSSARQAFEK 303
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
IQ + W++L+ Y Q EA+DL+ +M G+ VT+ LGA A + G
Sbjct: 304 IQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEG 363
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSWNALIAGHLA 356
+ +HS + + GF S V +L Y+KC L+ + F+ + + +V W A+I+ +
Sbjct: 364 KAIHSRVFECGFQSLV-VHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQ 422
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ H EA+EL M+ EG PN YT+SN+L S +E G + H + SNV +
Sbjct: 423 AGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAV 482
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ALV MYAKCG L A+ F+ K+LVSWN M+ YAQHGLGREAL++Y M +
Sbjct: 483 QNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGV 542
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P++ T LSAC G ++ G + ++++ + ++V+++ G+ A
Sbjct: 543 LPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETAR 602
Query: 537 EFIKSSPIEPNKVVWRCLLS--GCKTHKDLVLGRY 569
+ + + + W + S + H D VL Y
Sbjct: 603 SMFEDMG-QRDVLSWTAMTSAYAQQGHADQVLDLY 636
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/594 (27%), Positives = 287/594 (48%), Gaps = 61/594 (10%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSIS- 144
C G GK +H + R+G N + N LI MYG CG + A+ F +++
Sbjct: 52 CGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKAVAC 111
Query: 145 WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF 204
+ +LS+Y + G L+++ + G + + VLG+C+ +G+L+ +IH+ +
Sbjct: 112 YNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASII 171
Query: 205 KCALEFDKFVAM--GLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEA 262
+ +++ L+N+Y KC ++ A +VF I+ D +W+++I YA G EA
Sbjct: 172 EAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEA 231
Query: 263 IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
+DL+ +M + G+ P +TF+ L A + + G+ +H+ I+ S FV + +++
Sbjct: 232 LDLYQQMDADGIQPDSITFTSALLACTKL---VDGKAIHARIVSSNMES-DFVGSALINM 287
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
Y++C + + + F+++ VV W +L+ ++ +CHY EA++L M EG + TY
Sbjct: 288 YARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTY 347
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
L + + A++ GK H + + GF S +V+ +AL+ MYAKCG L+ AR VF+ +
Sbjct: 348 VTALGACASLGALKEGKAIHSRVFECGFQS-LVVHTALLTMYAKCGELDAARAVFNRVRQ 406
Query: 443 K-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW- 500
K N+ W M+ YAQ G +EALE+Y M +PN+ TF VL+AC G +E G
Sbjct: 407 KRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMK 466
Query: 501 ---HYFNSMIRDH------------------------GISPRMDHIA--SVVHLFACRGQ 531
H NS + + S R D ++ +++ +A G
Sbjct: 467 IHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGL 526
Query: 532 TRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIML 588
R A Y+ + S + P++V LS C L LGR ++L +S +
Sbjct: 527 GREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQT 586
Query: 589 SNVYAEANMWDETAKVRKIMKEKSLKKDTG----CSWTELQNKMHYFSTSRFAQ 638
+ V NM+ + ++ +S+ +D G SWT + TS +AQ
Sbjct: 587 ALV----NMY---GRCGRLETARSMFEDMGQRDVLSWTAM--------TSAYAQ 625
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 50/317 (15%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y +L + ++ GK H +++ G N +G+ L+ MY CG ++ AR F + +
Sbjct: 45 YDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFA 104
Query: 442 S-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
S K + +N ML Y ++GL ALE+Y M E +P+ T+ VL +C +G + E
Sbjct: 105 SIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAR 164
Query: 501 HYFNS------MIRDH-------------------------GISPRMDHIA--SVVHLFA 527
S +IRD+ GI R D ++ S++ +A
Sbjct: 165 EIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNR-DAVSWTSMISSYA 223
Query: 528 CRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSA 584
G A Y+ + + I+P+ + + L C LV G+ +I+S++ E
Sbjct: 224 NNGFCDEALDLYQQMDADGIQPDSITFTSALLAC---TKLVDGKAIHARIVSSNMESDFV 280
Query: 585 HIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDL 644
L N+YA + + R+ EK K C WT L Y T + + +DL
Sbjct: 281 GSALINMYARCG---DVSSARQAF-EKIQNKHVVC-WTSLMTA--YVQTCHYR--EALDL 331
Query: 645 HEVMNQLSVHLFDGGYV 661
+ M+ VH YV
Sbjct: 332 YGRMDHEGVHADGVTYV 348
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F +++ L+ MY + R+ A+ +F++M +R+V+SW+A+ S ++Q G + L+ +
Sbjct: 578 FRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYL 637
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG--LELNSHVSNCLINMYGK 123
MV + PN T+ + C+ G G E M + + H C++++ G+
Sbjct: 638 EMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFL-CMVDLLGR 696
Query: 124 CGLLSSAQFVFDA-SLERNSISWVSLLSS 151
G L A+ + ++ + +S++W+++L S
Sbjct: 697 SGRLRDAEALVESMPYQPDSVAWLTVLGS 725
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 213/660 (32%), Positives = 354/660 (53%), Gaps = 17/660 (2%)
Query: 20 YVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA--LNYFRLMVCCVLEPNYY 77
++ ++ A LFD++P +V +++ LI +S A L+ +R M+ + PN Y
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T+ A+ AC++ D G+ IH +GL+ + VS L++MY KC L A +F
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL---GNLK 194
R+ ++W ++L+ Y G + H + LLS + + + ++++ +L G L
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVA-HLLSMQMQMHRLRPNASTLVALLPLLAQQGALA 245
Query: 195 VGMQIHSLVFKCALEFDK----------FVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
G +H+ + L ++ + L+++YAKC L A RVF + +
Sbjct: 246 QGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 305
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSL 303
WSALIGG+ + +A LF M + GL S + + L A A + G QLH+L
Sbjct: 306 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHAL 365
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+ K G + N++L Y+K L+++++ FDEM D VS++AL++G++ + EA
Sbjct: 366 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEA 425
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ K M P+ T +++ S + A++ G+ +H ++ G S I +AL+DM
Sbjct: 426 FLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDM 485
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
YAKCGR++ +R+VF+ + S+++VSWNTM+ GY HGLG+EA ++ M P+ TF
Sbjct: 486 YAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTF 545
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
I +LSAC H GLV EG H+F+ M +G++PRM+H +V L + G AYEFI+S P
Sbjct: 546 ICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMP 605
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
+ + VW LL C+ +K++ LG+ + I PE T ++LSN+Y+ A +DE A+
Sbjct: 606 LRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAE 665
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
VR I K + KK GCSW E+ +H F + Q +++ ++ + V + GY PD
Sbjct: 666 VRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPD 725
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 239/494 (48%), Gaps = 29/494 (5%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +G ++ LL MYVK + + DA +F MP R++++W+A+++G++ GM A+
Sbjct: 152 IHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAV 211
Query: 62 NYFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH------- 112
+ M + L PN T V + A +G G +H R+ L N +
Sbjct: 212 AHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTD 271
Query: 113 ---VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
+ L++MY KCG L A+ VFDA RN ++W +L+ + C +F
Sbjct: 272 GVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAML 331
Query: 170 KSGVA-ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
G+ +S S AS L ACA L +L++G Q+H+L+ K + D L+++YAK +
Sbjct: 332 AQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLI 391
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
D A +F + + D ++SAL+ GY Q G+A EA +F KM + + P T ++ A
Sbjct: 392 DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 451
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ + GR H +I G +S T + N ++D Y+KC ++ S + F+ M D+VSWN
Sbjct: 452 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWN 511
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THC 403
+IAG+ EA L +M G P+ T+ +L+ S + GK H
Sbjct: 512 TMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHG 571
Query: 404 CIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG----YAQHG 459
+ P + + +VD+ ++ G L++A + + + V L+G Y
Sbjct: 572 YGLTPRMEHYIC----MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNID 627
Query: 460 LGREALEIYSMMQE 473
LG+ ++ M+QE
Sbjct: 628 LGK---KVSRMIQE 638
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 44/245 (17%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G N L+ MY K RI+ ++++F+ MP R+++SW+ +I+G+ G+ + A
Sbjct: 467 VIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEA 526
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN--CLI 118
F M P+ T++ +SAC+ G GK M R G L + + C++
Sbjct: 527 TALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVM-RHGYGLTPRMEHYICMV 585
Query: 119 NMYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
++ + G L A +F+ L + WV+L
Sbjct: 586 DLLSRGGFLDEAYEFIQSMPLRADVRVWVAL----------------------------- 616
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALE-FDKFVAMGLINLYAKCEKLDLAS--RV 234
LGAC V N+ +G ++ ++ + E FV L N+Y+ + D A+ R+
Sbjct: 617 ------LGACRVYKNIDLGKKVSRMIQELGPEGTGNFVL--LSNIYSAAGRFDEAAEVRI 668
Query: 235 FSNIQ 239
+Q
Sbjct: 669 IQKVQ 673
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 204/664 (30%), Positives = 364/664 (54%), Gaps = 1/664 (0%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H NVI+ N +++ Y+K ++ A+ LFD M +R+V++W+ LI G++Q A N F
Sbjct: 70 HKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFAD 129
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + P++ T +S ++HG + + G + V N L++ Y K
Sbjct: 130 MCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRS 189
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A +F E++++++ +LL+ Y + G + + +F + G SEF+ A+VL A
Sbjct: 190 LGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA 249
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
+ +++ G Q+HS V KC ++ FVA L++ Y+K +++ A ++F + D ++
Sbjct: 250 GIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISY 309
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ LI A G+ E+++LF ++ + + F+ +L A+ GRQ+HS I
Sbjct: 310 NVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIV 369
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
S V N+++D Y+KC+ E+ + F ++ V W ALI+G++ + + ++L
Sbjct: 370 TDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKL 429
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+M + TY++IL +++ ++ GKQ H I++ G SNV GSALVDMYAK
Sbjct: 430 FVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAK 489
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + +A ++F + +N VSWN ++ YAQ+G G AL + M + ++PN +F+ +
Sbjct: 490 CGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSI 549
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L AC H GLVEEG YFNSM + + + PR +H AS+V + G+ A + + P EP
Sbjct: 550 LCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEP 609
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP-EDTSAHIMLSNVYAEANMWDETAKVR 605
++++W +L+ C+ HK+ L AA+++ + D + ++ +SN+YA A WD KV+
Sbjct: 610 DEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVK 669
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPI 665
K ++E+ ++K SW E++ K H FS + + Q ++ +++L + + GY PD
Sbjct: 670 KALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDST 729
Query: 666 YSSH 669
+ H
Sbjct: 730 CALH 733
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 251/497 (50%), Gaps = 6/497 (1%)
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ +PN + V RGD + +++ M N +N +I Y K G
Sbjct: 33 MIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHK----NVISTNTMIMGYLKSGN 88
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
LS+A+ +FD+ ++R+ ++W L+ Y Q + +F + G+ + A++L
Sbjct: 89 LSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSG 148
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
++ Q+H V K + V L++ Y K L LA +F ++ D +
Sbjct: 149 FTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTF 208
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+AL+ GY++ G +AI+LF KM G PSE TF+ VL A + + G+Q+HS ++K
Sbjct: 209 NALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVK 268
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
F FVAN +LDFYSK + + E+ K F EM E D +S+N LI + E++EL
Sbjct: 269 CNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLEL 328
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+++ F + ++ +L+I+++ +E G+Q H + S V++G++LVDMYAK
Sbjct: 329 FRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAK 388
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
C + +A ++F L+ ++ V W ++ GY Q GL + L+++ M KI + T+ +
Sbjct: 389 CDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASI 448
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L AC ++ + G + +IR +S +++V ++A G + A + + P+
Sbjct: 449 LRACANLASLTLGKQLHSRIIRSGCLSNVFSG-SALVDMYAKCGSIKEALQMFQEMPVR- 506
Query: 547 NKVVWRCLLSGCKTHKD 563
N V W L+S + D
Sbjct: 507 NSVSWNALISAYAQNGD 523
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 231/458 (50%), Gaps = 10/458 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ ++ N LL Y K + A LF M E++ ++++AL++G+S+ G A
Sbjct: 165 VVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDA 224
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+N F M P+ +T+ ++A D G+++H + + N V+N L++
Sbjct: 225 INLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDF 284
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K + A+ +F E + IS+ L++ G L++F + + +F
Sbjct: 285 YSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPF 344
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A++L A NL++G QIHS + V L+++YAKC+K A+R+F+++
Sbjct: 345 ATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAH 404
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
W+ALI GY Q G + + LFV+M + + T++ +L A A++ G+QL
Sbjct: 405 QSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQL 464
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS II+ G S F + ++D Y+KC ++E+L+ F EM + VSWNALI+ + +
Sbjct: 465 HSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDG 524
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSNVV 415
G A+ + M+ G PN ++ +IL S +E G Q T ++P +
Sbjct: 525 GHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHY-- 582
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
+++VDM + GR ++A K+ + + + W+++L
Sbjct: 583 --ASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSIL 618
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 213/660 (32%), Positives = 354/660 (53%), Gaps = 17/660 (2%)
Query: 20 YVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA--LNYFRLMVCCVLEPNYY 77
++ ++ A LFD++P +V +++ LI +S A L+ +R M+ + PN Y
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T+ A+ AC++ D G+ IH +GL+ + VS L++MY KC L A +F
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL---GNLK 194
R+ ++W ++L+ Y G + H + LLS + + + ++++ +L G L
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVA-HLLSMQMQMHRLRPNASTLVALLPLLAQQGALA 245
Query: 195 VGMQIHSLVFKCALEFDK----------FVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
G +H+ + L ++ + L+++YAKC L A RVF + +
Sbjct: 246 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 305
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSL 303
WSALIGG+ + +A LF M + GL S + + L A A + G QLH+L
Sbjct: 306 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHAL 365
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+ K G + N++L Y+K L+++++ FDEM D VS++AL++G++ + EA
Sbjct: 366 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEA 425
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ K M P+ T +++ S + A++ G+ +H ++ G S I +AL+DM
Sbjct: 426 FLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDM 485
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
YAKCGR++ +R+VF+ + S+++VSWNTM+ GY HGLG+EA ++ M P+ TF
Sbjct: 486 YAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTF 545
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
I +LSAC H GLV EG H+F+ M +G++PRM+H +V L + G AYEFI+S P
Sbjct: 546 ICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMP 605
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
+ + VW LL C+ +K++ LG+ + I PE T ++LSN+Y+ A +DE A+
Sbjct: 606 LRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAE 665
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
VR I K + KK GCSW E+ +H F + Q +++ ++ + V + GY PD
Sbjct: 666 VRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPD 725
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 239/494 (48%), Gaps = 29/494 (5%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +G ++ LL MYVK + + DA +F MP R++++W+A+++G++ GM A+
Sbjct: 152 IHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAV 211
Query: 62 NYFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH------- 112
+ M + L PN T V + A +G G +H R+ L N +
Sbjct: 212 AHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTD 271
Query: 113 ---VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
+ L++MY KCG L A+ VFDA RN ++W +L+ + C +F
Sbjct: 272 GVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAML 331
Query: 170 KSGVA-ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
G+ +S S AS L ACA L +L++G Q+H+L+ K + D L+++YAK +
Sbjct: 332 AQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLI 391
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
D A +F + + D ++SAL+ GY Q G+A EA +F KM + + P T ++ A
Sbjct: 392 DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 451
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ + GR H +I G +S T + N ++D Y+KC ++ S + F+ M D+VSWN
Sbjct: 452 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWN 511
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THC 403
+IAG+ EA L +M G P+ T+ +L+ S + GK H
Sbjct: 512 TMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHG 571
Query: 404 CIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG----YAQHG 459
+ P + + +VD+ ++ G L++A + + + V L+G Y
Sbjct: 572 YGLTPRMEHYIC----MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNID 627
Query: 460 LGREALEIYSMMQE 473
LG+ ++ M+QE
Sbjct: 628 LGK---KVSRMIQE 638
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 42/244 (17%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G N L+ MY K RI+ ++++F+ MP R+++SW+ +I+G+ G+ + A
Sbjct: 467 VIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEA 526
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE-IHGRMYRSGLELNSHVSNCLIN 119
F M P+ T++ +SAC+ G GK H + GL C+++
Sbjct: 527 TALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVD 586
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+ + G L A +F+ L + WV+L
Sbjct: 587 LLSRGGFLDEAYEFIQSMPLRADVRVWVAL------------------------------ 616
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALE-FDKFVAMGLINLYAKCEKLDLAS--RVF 235
LGAC V N+ +G ++ ++ + E FV L N+Y+ + D A+ R+
Sbjct: 617 -----LGACRVYKNIDLGKKVSRMIQELGPEGTGNFVL--LSNIYSAAGRFDEAAEVRII 669
Query: 236 SNIQ 239
+Q
Sbjct: 670 QKVQ 673
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 220/682 (32%), Positives = 350/682 (51%), Gaps = 36/682 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG----- 55
++ +G ++ N L+ Y ++DA KLFD MPERN++SW+++I FS G
Sbjct: 213 VVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDDGAF 272
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
MP+VA T V + CA + GK +HG + L+ V+N
Sbjct: 273 MPDVA-----------------TVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNN 315
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHG---LKIFLLSRKSG 172
L++MY K G + +Q +F + +N +SW +++ + G+ +HG L +L+
Sbjct: 316 ALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGD-IHGTFDLLRQMLAGSED 374
Query: 173 VAISEFSCASVLGAC---AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
V E + + + C +VL +LK ++H K +D+ +A + YAKC L
Sbjct: 375 VKADEVTILNAVPVCFDESVLPSLK---ELHCYSLKQEFVYDELLANAFVASYAKCGSLS 431
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A RVF I+ L +W+ALIGGYAQ ++D ++M +SGL+P T +L A +
Sbjct: 432 YAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACS 491
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+K G+++H II+ FV +VL Y C L FD M+++ +VSWN
Sbjct: 492 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNT 551
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I GHL + A+ L + M+ G P + + S +P++ G++ H +K
Sbjct: 552 VITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHL 611
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ N I +++DMYAK G + + KVF+ L K+ SWN M++GY HG +EA++++
Sbjct: 612 LEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFE 671
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
MQ P+D TF+GVL+AC H GL+ EG Y + M G+ P + H A V+ +
Sbjct: 672 EMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRA 731
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
GQ A EP+ +W LLS C+ H++L +G A K+ +PE +++LS
Sbjct: 732 GQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLS 791
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST-SRFAQ-FQGIDLHEV 647
N+YA WD+ +VR+ MKE SL+KD GCSW EL K+ F RF F+ ++ +
Sbjct: 792 NLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFE--EIKSL 849
Query: 648 MNQLSVHLFDGGYVPDPIYSSH 669
+ L + ++ GY PD H
Sbjct: 850 WSILEMKIWKMGYRPDTSSVQH 871
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 227/480 (47%), Gaps = 17/480 (3%)
Query: 15 HLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV-LE 73
++ MY +D++ FD + +N+ W+A+IS +S+ + L F M+ L
Sbjct: 125 RIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLL 184
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ +T+ + ACA D G +HG + ++GL + V N L++ YG G +S A +
Sbjct: 185 PDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKL 244
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF-SCASVLGACAVLGN 192
FD ERN +SW S++ + G+ G + + + +VL CA
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGD-------------DGAFMPDVATVVTVLPVCARERE 291
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+ VG +H K +L+ + V L+++Y+K + + +F ++ +W+ ++GG
Sbjct: 292 IGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGG 351
Query: 253 YAQLGKACEAIDLFVKMF--SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
++ G DL +M S + EVT + D ++LH +K F
Sbjct: 352 FSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFV 411
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
+AN + Y+KC L + + F + + SWNALI G+ S +++ M
Sbjct: 412 YDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQM 471
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
G P+ +T ++L+ S + ++ GK+ H I++ + ++ + +++ +Y CG L
Sbjct: 472 KNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 531
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ +FD + +LVSWNT++ G+ Q+G AL ++ M I+P + + V AC
Sbjct: 532 CTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGAC 591
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 163/332 (49%), Gaps = 26/332 (7%)
Query: 164 IFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF-KCALEFDKFVAMGLINLY 222
+FLL R++ +L A ++++G +IH LV L D + +I +Y
Sbjct: 79 VFLLVREA--------LGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMY 130
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTF 281
A C D + F ++ +L W+A+I Y++ E +++F+KM S + L+P TF
Sbjct: 131 AMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTF 190
Query: 282 SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
V+ A A + + G +H L++K G FV N ++ FY + ++LK FD M E
Sbjct: 191 PCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPE 250
Query: 342 HDVVSWNALIAGHLASCHYGEAIELLKDMLFEG-HCPNLYTYSNILNISSDIPAIEWGKQ 400
++VSWN++ I + D +G P++ T +L + + I GK
Sbjct: 251 RNLVSWNSM-------------IRVFSDNGDDGAFMPDVATVVTVLPVCAREREIGVGKG 297
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
H VK D +V+ +AL+DMY+K G + D++ +F ++KN+VSWNTM+ G++ G
Sbjct: 298 VHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGD 357
Query: 461 GREALEIYSMM--QENKIKPNDNTFIGVLSAC 490
++ M +K ++ T + + C
Sbjct: 358 IHGTFDLLRQMLAGSEDVKADEVTILNAVPVC 389
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 385 ILNISSDIPAIEWGKQTHCCIV-KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+L S IE G++ H + S+ V+ + ++ MYA CG +D+R FD L SK
Sbjct: 90 LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149
Query: 444 NLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSAC-----VHIGLVE 497
NL WN ++ Y+++ L E LE++ M+ + + P++ TF V+ AC V IGL
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
G ++ D + ++V + G A + P E N V W ++
Sbjct: 210 HGLVVKTGLVEDLFVG------NALVSFYGTHGFVSDALKLFDIMP-ERNLVSWNSMI 260
>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 913
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 199/622 (31%), Positives = 344/622 (55%), Gaps = 7/622 (1%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P+V+ L +K R+ DA LFD MP +NV++W+ ISG ++ G PE A F M
Sbjct: 68 PDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADM 127
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
+ + PN + A++ACA+ G G+++H R+G ++ + +CLI +Y +CG L
Sbjct: 128 LESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSL 187
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+A+ VF + + + SL+S+ C+ GE + + + G+ +E + S+L C
Sbjct: 188 RAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAEC 247
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+G QIH + K + + LI+ Y++ A VF N++ ++ +W
Sbjct: 248 P----RGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWC 303
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+++ + G+ +A+ +F +M S G+ P+E FS L A V GRQ+H IK
Sbjct: 304 SMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSV---CLGRQIHCSAIKR 360
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
+ V+N +L Y + + E +++ D+VSW A I+ + + +A+ LL
Sbjct: 361 DLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALL 420
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M EG PN Y +S+ L+ +D+ + G+Q HC +K G D V G+AL++MY+KC
Sbjct: 421 LQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKC 480
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
GR+ AR FD + + +++SWN+++ G AQHG ALE +S M + +P+D+TF+ VL
Sbjct: 481 GRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVL 540
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
C H GLV+EG +F M +G++P H A ++ + G+ A I++ P EP+
Sbjct: 541 VGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPD 600
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
++W+ LL+ CK H++L +G+ AA+K++ D+++++++SN+YA W + +VR+
Sbjct: 601 VLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRR 660
Query: 608 MKEKSLKKDTGCSWTELQNKMH 629
M E +KKD G SW E++N++
Sbjct: 661 MDEIGVKKDAGWSWIEVKNEVE 682
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 222/459 (48%), Gaps = 9/459 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + + L+ +Y + + A+++F M +V+ +++L+S + G A+
Sbjct: 163 VRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAV 222
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M L+PN +T ++ C RG G++IHG M + + + S LI+ Y
Sbjct: 223 DVLCQMTRQGLQPNEHTMTSMLAECP-RG---IGEQIHGYMLKVMGSQSVYASTALIDFY 278
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+ G +A+ VF+ +N +SW S++ + G L++F GV +EF+ +
Sbjct: 279 SRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFS 338
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
L AC G++ +G QIH K L D V+ L+++Y + + V I+ P
Sbjct: 339 IALSAC---GSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENP 395
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
DL +W+A I Q G + +A+ L ++M S G P++ FS L + AD+ GRQLH
Sbjct: 396 DLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLH 455
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
L +K+G N +++ YSKC + + FD MD HDV+SWN+LI G
Sbjct: 456 CLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDAN 515
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV-KPGFDSNVVIGSAL 420
A+E +M P+ T+ ++L + ++ G+ + + G + +
Sbjct: 516 LALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACM 575
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
+DM + GR +A ++ +++ +++ W T+L H
Sbjct: 576 IDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLH 614
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 202/642 (31%), Positives = 357/642 (55%), Gaps = 17/642 (2%)
Query: 7 HPNVITY--NHLLLMYVKFSRIND--AQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
HPN + N LL Y + A +L DEMP RN +S++ +I +S+ G+P ++L
Sbjct: 29 HPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSYNLVIVAYSRAGLPALSLA 88
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F + +TY A++AC+ D R+GK +H + GL +SN + +MY
Sbjct: 89 TFARARAWARVVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYA 148
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
+CG + A+ VFDA+ ER+ +SW +LLS Y + G L++F L + G+ + F+ S
Sbjct: 149 RCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGS 208
Query: 183 VLGACAV---------LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
++ CA +G ++ +H V K L+ D F+A +I++YAK L A
Sbjct: 209 IIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVA 268
Query: 234 VFSNIQLPDLTAWSALIGGYAQ---LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
+F ++ P++ +A+I G+ + A EA+ L+ ++ S G+ PSE +FS +L A
Sbjct: 269 LFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNL 328
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
E G+Q+H ++K F ++ + ++D YS +E+ + F + + DVV W ++
Sbjct: 329 AGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSV 388
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
I+G + + + EA+ L ++ + G P+++ S+++N + + G+Q C VK GF
Sbjct: 389 ISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGF 448
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
+ +G++ + M A+ G ++ A + F + S+++VSW+ ++ +A HG R+AL +++
Sbjct: 449 NRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNE 508
Query: 471 MQENKI-KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M + K+ PN+ TF+ +L+AC H GLV+EG Y+ M ++G+SP + H VV L
Sbjct: 509 MLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRA 568
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
G+ A FI+ S + VVWR LL+ C+ H D+ G+ A+KI+ +P ++++++L
Sbjct: 569 GRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADKIMDLEPTSSASYVILY 628
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
N+Y +A +K R +MKE+ +KK+ G SW EL + +H F
Sbjct: 629 NMYLDAGELSSASKTRDLMKERGVKKEPGLSWIELSSGVHSF 670
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F +V + L+ +Y + D + F +P+++V+ W+++ISG Q + E AL F+
Sbjct: 347 FQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQ 406
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
V C L P+ + ++ACAS AR+G++I +SG + + N I+M + G
Sbjct: 407 ESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSG 466
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA-ISEFSCASVL 184
+ +A F R+ +SW +++SS+ G L +F + VA +E + S+L
Sbjct: 467 DVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSIL 526
Query: 185 GACAVLGNLKVGMQIHSLV 203
AC+ G + G++ + ++
Sbjct: 527 TACSHGGLVDEGLRYYGIM 545
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 277/482 (57%), Gaps = 1/482 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
++L C V L G +H + + D + L+N+YAKC L+ A +VF +
Sbjct: 56 TLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPER 115
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D W+ LI GY+Q + +A+ LF +M G P+E T S V+ A A + G QLH
Sbjct: 116 DFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLH 175
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+K GF S V + +LD Y++ L++++ FD ++ + VSWNALIAGH C
Sbjct: 176 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTE 235
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A+EL + ML EG P+ ++Y+++ S +E GK H ++K G G+ L+
Sbjct: 236 KALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 295
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAK G ++DARK+FD L+ +++VSWN++L YAQHG G EA+ + M+ I+PN+
Sbjct: 296 DMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEI 355
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
+F+ VL+AC H GL++EGWHY+ M +D GI H ++V L G RA FI+
Sbjct: 356 SFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALRFIEE 414
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
PIEP +W+ LL+ C+ HK+ LG YAAE + DP+D H++L N+YA W++
Sbjct: 415 MPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDA 474
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A+VRK MKE +KK+ CSW E++N +H F + Q ++ ++ + + GYV
Sbjct: 475 ARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYV 534
Query: 662 PD 663
PD
Sbjct: 535 PD 536
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 212/438 (48%), Gaps = 39/438 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I S F +++ N LL MY K + +A+K+FD+MPER+ ++W+ LISG+SQ P A
Sbjct: 77 LIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDA 136
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ PN +T + A A+ G ++HG + G + N HV + L+++
Sbjct: 137 LVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDL 196
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYC-QCGEHVHGLKIFLLSRKSGVAISEFS 179
Y + GL+ AQ VFDA RN +SW +L++ + +CG L++F + G S FS
Sbjct: 197 YTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTE-KALELFQGMLREGFRPSHFS 255
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
AS+ GAC+ G L+ G +H+ + K + F L+++YAK + A ++F +
Sbjct: 256 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 315
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +W++L+ YAQ G EA+ F +M G+ P+E++F VL A + G
Sbjct: 316 KRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWH 375
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASC 358
+ L+ K G + T++D + L +L+ +EM E W AL L +C
Sbjct: 376 YYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKAL----LNAC 431
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ EL Y ++ + D P +V+
Sbjct: 432 RMHKNTEL-----------GAYAAEHVFELDPDDPG-----------------PHVI--- 460
Query: 419 ALVDMYAKCGRLNDARKV 436
L ++YA GR NDA +V
Sbjct: 461 -LYNIYASGGRWNDAARV 477
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 188/388 (48%), Gaps = 3/388 (0%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
G+ +HG + +S + ++N L+NMY KCG L A+ VFD ER+ ++W +L+S Y
Sbjct: 69 QGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYS 128
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
Q L +F + G + +EF+ +SV+ A A G Q+H KC + +
Sbjct: 129 QHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 188
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
V L++LY + +D A VF ++ + +W+ALI G+A+ +A++LF M G
Sbjct: 189 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREG 248
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
PS +++ + GA + G+ +H+ +IK G F NT+LD Y+K + ++
Sbjct: 249 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 308
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
K FD + + DVVSWN+L+ + EA+ ++M G PN ++ ++L S
Sbjct: 309 KIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSG 368
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTML 452
++ G + + K G +VD+ + G LN A + + + + + W +L
Sbjct: 369 LLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 428
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPND 480
H L Y+ ++ P+D
Sbjct: 429 NACRMH--KNTELGAYAAEHVFELDPDD 454
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 63/110 (57%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y+ +L + + G+ H +++ F ++V+ + L++MYAKCG L +ARKVFD +
Sbjct: 54 YNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMP 113
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
++ V+W T++ GY+QH +AL +++ M PN+ T V+ A
Sbjct: 114 ERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAA 163
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 322/581 (55%), Gaps = 1/581 (0%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
+ A + GK++H + R G N+ +SN +N+Y KCG L +FD +RN
Sbjct: 82 IQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNM 141
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
+SW S+++ + L F R G ++F+ +SVL AC LG ++ G Q+H L
Sbjct: 142 VSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCL 201
Query: 203 VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEA 262
V KC + FV L ++Y+KC +L A + F + D W+++I G+ + G +A
Sbjct: 202 VVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKA 261
Query: 263 IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
+ ++KM + + + L A + +K + G+ LH+ I+K+GF TF+ N + D
Sbjct: 262 LTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDM 321
Query: 323 YSKCELLEESLKTFD-EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYT 381
YSK + + F D +VS A+I G++ +A+ D+ G PN +T
Sbjct: 322 YSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFT 381
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
+++++ ++ +E G Q H +VK F + + S LVDMY KCG + + ++FD +
Sbjct: 382 FTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIE 441
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
+ + ++WNT++ ++QHGLGR A+E ++ M +KPN TF+ +L C H G+VE+G +
Sbjct: 442 NPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLN 501
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
YF+SM + +G+ P+ +H + V+ L G+ + A +FI + P EPN W L CK H
Sbjct: 502 YFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIH 561
Query: 562 KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSW 621
D+ ++AA+K++ +PE++ AH++LSN+YA+ W++ +RK++K+ ++ K G SW
Sbjct: 562 GDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSW 621
Query: 622 TELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+++NK H F ++ Q +++E ++ L + GYVP
Sbjct: 622 VDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVP 662
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 246/516 (47%), Gaps = 13/516 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G PN NH L +Y K ++ KLFD+M +RN++SW+++I+GF+ + A
Sbjct: 101 LIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEA 160
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M + + AC S G + G ++H + + G V + L +M
Sbjct: 161 LSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDM 220
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG LS A F+ ++++ W S++ + + G+ L ++ V I +
Sbjct: 221 YSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVL 280
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS-NIQ 239
S L AC+ L G +H+ + K E++ F+ L ++Y+K + AS VF +
Sbjct: 281 CSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSD 340
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ + +A+I GY ++ + +A+ FV + G+ P+E TF+ ++ A A+ + G Q
Sbjct: 341 CISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQ 400
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH ++K F FV++T++D Y KC L + S++ FDE++ D ++WN L+
Sbjct: 401 LHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGL 460
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
AIE M+ G PN T+ N+L S +E G + K G S
Sbjct: 461 GRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYS 520
Query: 419 ALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG-LGREALEIYSMMQENKI 476
++D+ + G+L +A +++ N+ W + L HG + R +M K+
Sbjct: 521 CVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLM---KL 577
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNS---MIRD 509
+P ++ +LS +I E+ W S MI+D
Sbjct: 578 EPENSGAHVLLS---NIYAKEKQWEDVQSLRKMIKD 610
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 222/707 (31%), Positives = 351/707 (49%), Gaps = 52/707 (7%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
+HL+ Y+ ++ A L P + V W++LI + G L+ F LM
Sbjct: 63 SHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLS 122
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
P+ YT+ AC R G H +G N V N L+ MY +CG LS A+
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDAR 182
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVL 190
VFD + +SW S++ SY + G+ L++F ++ + G + + +VL CA +
Sbjct: 183 KVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASV 242
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G +G Q H + + FV L+++YAK +D A+ VFSN+ + D+ +W+A++
Sbjct: 243 GTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMV 302
Query: 251 GGYAQLGKACEAIDLF-----------------------------------VKMFSSGLM 275
GY+Q+G+ +A+ LF +M SSG+
Sbjct: 303 AGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKM-------GFSSFTFVANTVLDFYSKCEL 328
P+EVT VL A V + G+++H IK G V N ++D Y+KC+
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 329 LEESLKTFDEMD--EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC---PNLYTYS 383
++ + FD + E DVV+W +I G+ +A+ELL +M FE C PN +T S
Sbjct: 423 VDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM-FEEDCQTRPNAFTIS 481
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDS-NVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
L + + A+ GKQ H ++ ++ + + + L+DMYAKCG + DAR VFD++
Sbjct: 482 CALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMME 541
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
KN V+W +++ GY HG G EAL I+ M+ K + T + VL AC H G++++G Y
Sbjct: 542 KNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
FN M D G+SP +H A +V L G+ A I+ P+EP VVW LLS C+ H
Sbjct: 602 FNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHG 661
Query: 563 DLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWT 622
+ LG YAA+KI + ++ +LSN+YA A W + ++R +M+ K +KK GCSW
Sbjct: 662 KVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWV 721
Query: 623 ELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
E F ++++V++ + D GYVP+ ++ H
Sbjct: 722 EGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALH 768
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 156/569 (27%), Positives = 270/569 (47%), Gaps = 66/569 (11%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+GF NV N L+ MY + ++DA+K+FDEMP +V+SW+++I ++++G P++AL
Sbjct: 156 TGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEM 215
Query: 64 FRLMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F M P+ T V + CAS G GK+ HG S + N V NCL++MY
Sbjct: 216 FSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYA 275
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK------------ 170
K G++ A VF ++ +SW ++++ Y Q G +++F ++
Sbjct: 276 KFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSA 335
Query: 171 -----------------------SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
SG+ +E + SVL CA +G L G +IH K
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 208 LEFDK-------FVAMGLINLYAKCEKLDLASRVFSNI--QLPDLTAWSALIGGYAQLGK 258
++ K V LI++YAKC+K+D+A +F ++ + D+ W+ +IGGY+Q G
Sbjct: 396 MDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 259 ACEAIDLFVKMFSSGLM--PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT-FV 315
A +A++L +MF P+ T S L A A + G+Q+H+ ++ ++ FV
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFV 515
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
+N ++D Y+KC + ++ FD M E + V+W +L+ G+ + EA+ + ++M G
Sbjct: 516 SNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGF 575
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGSALVDMYAKCGRL 430
+ T +L S I+ G + + V PG + + LVD+ + GRL
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHY----ACLVDLLGRAGRL 631
Query: 431 NDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQENKIKPNDNTFIGV 486
N A ++ + + V W +L HG LG A + + + N ND ++ +
Sbjct: 632 NAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASN----NDGSYTLL 687
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPR 515
+ + G ++ S++R GI R
Sbjct: 688 SNMYANAGRWKDVTR-IRSLMRHKGIKKR 715
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 140/544 (25%), Positives = 222/544 (40%), Gaps = 100/544 (18%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+TS N+ N L+ MY KF +++A +F MP ++V+SW+A+++G+SQIG E A+
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAV 315
Query: 62 NYF-----------------------------------RLMVCCVLEPNYYTYVGAVSAC 86
F R M+ ++PN T + +S C
Sbjct: 316 RLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Query: 87 ASRGDARSGKEIH--GRMYRSGLELNSH-----VSNCLINMYGKCGLLSSAQFVFD--AS 137
AS G GKEIH Y L N H V N LI+MY KC + A+ +FD +
Sbjct: 376 ASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSP 435
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKV 195
ER+ ++W ++ Y Q G+ L++ + + F+ + L ACA L L +
Sbjct: 436 KERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSI 495
Query: 196 GMQIHSLVFKCALE-FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G QIH+ + FV+ LI++YAKC + A VF N+ + W++L+ GY
Sbjct: 496 GKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYG 555
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-LHSLIIKMGFSSFT 313
G EA+ +F +M G VT VL A + G + + + G S
Sbjct: 556 MHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGP 615
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
++D + L +L+ +EM E V W AL L+ C +EL +
Sbjct: 616 EHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAL----LSCCRIHGKVELGE---- 667
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
Y I ++S+ N + L +MYA GR D
Sbjct: 668 -------YAAKKITELASN---------------------NDGSYTLLSNMYANAGRWKD 699
Query: 433 ARKVFDHLSSKNL-----VSW-------NTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
++ + K + SW T VG H A EIY ++ ++ + D
Sbjct: 700 VTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTH---PHAKEIYQVLSDHMQRIKD 756
Query: 481 NTFI 484
++
Sbjct: 757 IGYV 760
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 191/592 (32%), Positives = 328/592 (55%), Gaps = 3/592 (0%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P T+ + CA+R D +G+ +H ++ GL + + L NMY KC A+ V
Sbjct: 223 PVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRV 282
Query: 134 FDASLERNSISWVSLLSSYCQCG--EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
FD R+ ++W +L++ Y + G E G+ + + + G + SVL ACA
Sbjct: 283 FDRMPARDRVAWNALVAGYARNGLAEAAVGM-VVRMQEEDGERPDAVTLVSVLPACADAQ 341
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
L ++H+ + + V+ ++++Y KC +D A +VF +Q + +W+A+I
Sbjct: 342 ALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIK 401
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
GYA+ G A EA+ LF +M G+ ++V+ L A ++ GR++H L++++G S
Sbjct: 402 GYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLES 461
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V N ++ Y KC+ + + + FDE+ VSWNA+I G + +A+ L M
Sbjct: 462 NVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQ 521
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
E P+ +T +I+ +DI + H ++ D +V + +AL+DMYAKCGR++
Sbjct: 522 LENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVS 581
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
AR +F+ +++++WN M+ GY HG G+ A+E++ M+ + PN+ TF+ VLSAC
Sbjct: 582 IARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACS 641
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
H GLV+EG YF+SM D+G+ P M+H ++V L G+ A+ FI+ P+EP V+
Sbjct: 642 HAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVY 701
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
+L CK HK++ L +A++I +PE+ H++L+N+YA A++W + A+VR M++K
Sbjct: 702 GAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKK 761
Query: 612 SLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
L+K G S +L+N++H F + Q D++ + +L + GYVPD
Sbjct: 762 GLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPD 813
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 227/435 (52%), Gaps = 2/435 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ G P + L MY K R DA+++FD MP R+ ++W+AL++G+++ G+ E A
Sbjct: 251 LAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAA 310
Query: 61 LN-YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ R+ P+ T V + ACA + +E+H R G + +VS +++
Sbjct: 311 VGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILD 370
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y KCG + SA+ VFD +RNS+SW +++ Y + G+ L +F GV +++ S
Sbjct: 371 VYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVS 430
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ L AC LG L G ++H L+ + LE + V LI +Y KC++ DLA++VF +
Sbjct: 431 VLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELG 490
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+W+A+I G Q G + +A+ LF +M + P T ++ A AD+ + + R
Sbjct: 491 YKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARW 550
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H I++ +V ++D Y+KC + + F+ + V++WNA+I G+ +
Sbjct: 551 IHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGS 610
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
A+EL ++M G PN T+ ++L+ S ++ G++ + + G + +
Sbjct: 611 GKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYG 670
Query: 419 ALVDMYAKCGRLNDA 433
+VD+ + G+L++A
Sbjct: 671 TMVDLLGRAGKLHEA 685
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 177/369 (47%), Gaps = 4/369 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF V +L +Y K ++ A+K+FD M +RN +SW+A+I G+++ G AL
Sbjct: 354 VRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEAL 413
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ MV ++ + + A+ AC G G+ +H + R GLE N +V N LI MY
Sbjct: 414 ALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMY 473
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC A VFD + +SW +++ Q G +++F + V F+
Sbjct: 474 CKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLV 533
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S++ A A + + IH + L+ D +V LI++YAKC ++ +A +F++ +
Sbjct: 534 SIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDR 593
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-L 300
+ W+A+I GY G A++LF +M SSG +P+E TF VL A + G++
Sbjct: 594 HVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYF 653
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
S+ G T++D + L E+ +M +S + L +C
Sbjct: 654 SSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGIS---VYGAMLGACKL 710
Query: 361 GEAIELLKD 369
+ +EL ++
Sbjct: 711 HKNVELAEE 719
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 149/292 (51%), Gaps = 9/292 (3%)
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
+SG P TF+ +L A + GR +H+ + G S A + + Y+KC
Sbjct: 218 ASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPG 277
Query: 331 ESLKTFDEMDEHDVVSWNALIAGH----LASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
++ + FD M D V+WNAL+AG+ LA G + + ++ +G P+ T ++L
Sbjct: 278 DARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEE---DGERPDAVTLVSVL 334
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+D A+ ++ H V+ GFD V + +A++D+Y KCG ++ ARKVFD + +N V
Sbjct: 335 PACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSV 394
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
SWN M+ GYA++G EAL ++ M + D + + L AC +G ++EG +
Sbjct: 395 SWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELL 454
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
+R G+ ++ + +++ ++ +T A + + +V W ++ GC
Sbjct: 455 VR-IGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYK-TRVSWNAMILGC 504
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 2/254 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G NV N L+ MY K R + A ++FDE+ + +SW+A+I G +Q G E A
Sbjct: 454 LVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDA 513
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M ++P+ +T V + A A D + IHG R L+ + +V LI+M
Sbjct: 514 VRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 573
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG +S A+ +F+++ +R+ I+W +++ Y G +++F + SG +E +
Sbjct: 574 YAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTF 633
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL AC+ G + G + S+ LE +++L + KL A +
Sbjct: 634 LSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMP 693
Query: 240 L-PDLTAWSALIGG 252
+ P ++ + A++G
Sbjct: 694 MEPGISVYGAMLGA 707
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 225/659 (34%), Positives = 353/659 (53%), Gaps = 46/659 (6%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVC 69
+I+ N + Y K S+++ A++LFD+MP+R V+SW+ +IS +S+ G AL M
Sbjct: 72 IISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHR 131
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
++ + T+ +S CA R GK IH + +SG E V + L+ Y C +
Sbjct: 132 SHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGE 191
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF------------------------ 165
A+ VFD + RN + W +L Y C L +F
Sbjct: 192 ARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDG 251
Query: 166 ---------LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
L+ R +EF+ V+ AC LG L VG +H L+ KC LE+D +
Sbjct: 252 CGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGG 311
Query: 217 GLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
L+ Y +CE +D A RV + P L A ++LI G +G+ +A +F M + + P
Sbjct: 312 ALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGM--TEMNP 369
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHS--LIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
V+++ ++ +A +GG+ S L KM + F +NT++ YS+ ++++L+
Sbjct: 370 --VSYNLMIKGYA-----VGGQMDDSKRLFEKMPCRTI-FSSNTMISVYSRNGEIDKALE 421
Query: 335 TFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
F+E +E D V+WN++I+G++ S EA++L M T+S + + S +
Sbjct: 422 LFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLG 481
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+++ G+ H ++K F+SNV +G++L+DMY+KCG + +A+ F + S N+ +W ++
Sbjct: 482 SLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALIN 541
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
G+A HGLG EA+ ++ M E + PN TF+GVLSAC GLV EG F+SM R + ++
Sbjct: 542 GHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVT 601
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEK 573
P ++H A VV L G R A EFIK P+E + VVW LLS C DL +G AEK
Sbjct: 602 PTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEK 661
Query: 574 ILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
+ S DP+ S++++LSN+YA W E VRKI++ +KKD GCSW EL NK+H FS
Sbjct: 662 MFSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELNNKIHVFS 720
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 207/484 (42%), Gaps = 83/484 (17%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP-EVALNYFRLM 67
N + ++ +L+ YV + ++DA +F +MP R+V++W+ LISGFS+ G AL FRLM
Sbjct: 203 NEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRLM 262
Query: 68 V-CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC-- 124
+ PN +T+ V AC G G+ +HG + + GLE + + L+ Y +C
Sbjct: 263 MRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEA 322
Query: 125 -----------------------------GLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
G + A+ VF+ E N +S+ ++ Y
Sbjct: 323 IDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVG 382
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G+ ++F + C ++ F +
Sbjct: 383 GQMDDSKRLF----------EKMPCRTI-----------------------------FSS 403
Query: 216 MGLINLYAKCEKLDLASRVFSNIQ-LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
+I++Y++ ++D A +F + D W+++I GY G+ EA+ L++ M +
Sbjct: 404 NTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSI 463
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+ TFS + A + + G+ LH+ +IK F S +V +++D YSKC + E+
Sbjct: 464 QQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQT 523
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
+F + +V +W ALI GH EAI L M+ +G PN T+ +L+ S
Sbjct: 524 SFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGL 583
Query: 395 IEWGKQT-----HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSW 448
+ G + C V P + + VD+ + G + +A + + + V W
Sbjct: 584 VNEGMKIFHSMERCYSVTPTLEHYACV----VDLLGRSGHIREAEEFIKKMPLEADGVVW 639
Query: 449 NTML 452
+L
Sbjct: 640 GALL 643
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + F NV L+ MY K I +AQ F + NV +W+ALI+G + G+ A
Sbjct: 493 LIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEA 552
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR--SGLELNSHVSNCLI 118
++ F M+ L PN T+VG +SAC+ G G +I M R S H + C++
Sbjct: 553 ISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYA-CVV 611
Query: 119 NMYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
++ G+ G + A +F+ LE + + W +LLS+
Sbjct: 612 DLLGRSGHIREAEEFIKKMPLEADGVVWGALLSA 645
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 79/150 (52%), Gaps = 10/150 (6%)
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
S ++ + + YAK +L+ AR++FD + + +VSWNTM+ Y++HG EAL + M
Sbjct: 70 SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 129
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR-- 529
+ +K +++TF VLS C + + +G + ++ G S + + S + F
Sbjct: 130 HRSHMKLSESTFSSVLSVCARLRCLRDG-KLIHCLVLKSG-SESFELVGSALLYFYASCF 187
Query: 530 --GQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G+ RR ++ + + N+V+W +L G
Sbjct: 188 EIGEARRVFDVL----VRRNEVLWSLMLVG 213
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/599 (33%), Positives = 333/599 (55%), Gaps = 17/599 (2%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T + + +CA + GKE+H + ++ + LINMY KC L+ + VF+
Sbjct: 31 TCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFP 90
Query: 138 L--ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+N ++ +L++ + L ++ R G+A +F+ V+ AC + V
Sbjct: 91 THHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFV 150
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
+IH L+FK LE D FV L+N Y K + A RVF + + D+ W+A++ G+AQ
Sbjct: 151 VTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQ 210
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
+G+ EA+ +F +M +G++P T + VL F+ + + GR +H + KMG+ S V
Sbjct: 211 IGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVV 270
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC--HYGEAIELLKDMLFE 373
+N ++D Y KC+ + ++L F+ MDE D+ SWN++++ H C HYG + L M+
Sbjct: 271 SNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVH-ERCGDHYG-TLRLFDRMMGS 328
Query: 374 GHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG---------FDSNVVIGSALVDM 423
P+L T + +L + + A+ G++ H +V G FD +V++ +AL+DM
Sbjct: 329 SRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFD-DVLLNNALMDM 387
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
YAKCG + DAR VF ++ K++ SWN M+ GY HG G EAL+I+S M + ++ PN+ +F
Sbjct: 388 YAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISF 447
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+G+LSAC H G+V+EG + + M +G+SP ++H V+ + GQ AY+ + + P
Sbjct: 448 VGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMP 507
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
+ + V WR LL+ C+ H D L AA K++ +P+ ++++SNVY ++E +
Sbjct: 508 FKADPVGWRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVLE 567
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
R MK++++KK GCSW EL N +H F T Q ++ +N L+ L + GYVP
Sbjct: 568 WRYTMKQQNVKKRPGCSWIELVNGVHVFITGDRTHPQTEYIYAGLNSLTAVLQEHGYVP 626
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 206/418 (49%), Gaps = 28/418 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M G +V + L+ Y+KF + +A ++F+E+P R+V+ W+A+++GF+QIG E A
Sbjct: 158 MFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRFEEA 217
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M + P YT G +S + GD +G+ +HG + + G E VSN LI+M
Sbjct: 218 LGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNALIDM 277
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFS 179
YGKC + A VF+ E + SW S++S + +CG+H L++F + S V +
Sbjct: 278 YGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVT 337
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALE-------FDK-FVAMGLINLYAKCEKLDLA 231
+VL AC L L G +IH + L FD + L+++YAKC + A
Sbjct: 338 VTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDA 397
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD- 290
VF N++ D+ +W+ +I GY G EA+D+F +M + ++P+E++F +L A +
Sbjct: 398 RMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSACSHA 457
Query: 291 --VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSW 347
VKE +G L + K G S V+D + L E+ M + D V W
Sbjct: 458 GMVKEGLG--FLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGW 515
Query: 348 NALIAG-------HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI-EW 397
+L+A LA + IEL D HC N SN+ + + EW
Sbjct: 516 RSLLAACRLHNDTDLAEVAASKVIELEPD-----HCGNYVLMSNVYGVVGRYEEVLEW 568
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 226/472 (47%), Gaps = 15/472 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP---ERNVISWSALISGFSQIGMP 57
++ + F + + L+ MY K S I+ + ++F+ P +NV +++ALI+GF +P
Sbjct: 55 LLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFN-FPTHHNKNVFAYNALIAGFLANALP 113
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
+ AL + M + P+ +T+ + AC D +IHG M++ GLEL+ V + L
Sbjct: 114 QRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMFKVGLELDVFVGSAL 173
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+N Y K + A VF+ R+ + W ++++ + Q G L +F +GV
Sbjct: 174 VNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCR 233
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
++ VL +V+G+ G +H V K E V+ LI++Y KC+ + A VF
Sbjct: 234 YTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEM 293
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIG 296
+ D+ +W++++ + + G + LF +M SS + P VT + VL A + +
Sbjct: 294 MDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMH 353
Query: 297 GRQLHSLIIKMGFSSF--------TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
GR++H ++ G + + N ++D Y+KC + ++ F M E DV SWN
Sbjct: 354 GREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWN 413
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VK 407
+I G+ + GEA+++ M PN ++ +L+ S ++ G + K
Sbjct: 414 IMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESK 473
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH 458
G ++ + ++DM + G+L +A + + K + V W ++L H
Sbjct: 474 YGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAACRLH 525
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 205/662 (30%), Positives = 357/662 (53%), Gaps = 1/662 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N I+ N ++ ++KF +++ A++LFD M ER +SW+ LI G+ Q + A + M
Sbjct: 73 NTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMR 132
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+EP+Y T V +S +IH + + G E N V N L++ Y K L
Sbjct: 133 RGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLY 192
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A +F L ++++++ SL++ Y G + +++FL SG+ S+F+ A++L A
Sbjct: 193 LASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAV 252
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L + K G Q+H V K ++ FV L++ Y+K +++D ++F + D +++
Sbjct: 253 GLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNV 312
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I YA G+ E+ DLF K+ + + F+ +L GRQ+H I +G
Sbjct: 313 VITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVG 372
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
+ + V N ++D Y+KC +E+ K FD + V W A+I+ ++ + E I +
Sbjct: 373 ANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFS 432
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
DM G + T+++IL +++ +I G+Q H +++ GF SNV GSAL+D YAKCG
Sbjct: 433 DMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCG 492
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ DA K F + +N VSWN ++ YAQ+G L + M ++ KP+ +F+ VLS
Sbjct: 493 CMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H G VEE +FNSM + + ++P+ +H S+V + G+ A + + P EP++
Sbjct: 553 ACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSE 612
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILS-TDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
++W +L+ C+ HK+ L + AA+++ + D D + +I +SN+YA A WD AKV+K
Sbjct: 613 IMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKA 672
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
M+++ ++K SW E++++ H FS + + + + +N LS + GY PD +
Sbjct: 673 MRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCA 732
Query: 668 SH 669
H
Sbjct: 733 LH 734
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 143/506 (28%), Positives = 258/506 (50%), Gaps = 12/506 (2%)
Query: 57 PEVALNYFRLMVCCVLE----PNYYTYVGAVSACASRGDARSGKEIHGRM-YRSGLELNS 111
P+ +LN L+ +++ PN V+ RGD ++ +M ++ + LN
Sbjct: 20 PKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNM 79
Query: 112 HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
+S L K G LS A+ +FD +ER ++SW L+ Y Q + +++ R+
Sbjct: 80 MISGHL-----KFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRG 134
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G+ + ++L L V +QIH+ V K E++ V L++ Y K L LA
Sbjct: 135 GIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLA 194
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
S++F ++ D +++L+ GY+ G EAI+LF+++ +SG+ PS+ TF+ +L A +
Sbjct: 195 SQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGL 254
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
+T G+Q+H ++K F FV N +LD+YSK + ++E K F EM E D +S+N +I
Sbjct: 255 DDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVI 314
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
+ + + E+ +L + + F + ++ +L+I++ + G+Q HC + G +
Sbjct: 315 TSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGAN 374
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+ +ALVDMYAKC +A+K+FD+++ K+ V W M+ Y Q G E + ++S M
Sbjct: 375 FESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDM 434
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
+ + + TF +L AC ++ + G + +IR G + ++++ +A G
Sbjct: 435 RRTGVPADQATFASILRACANLASISLGRQLHSLLIRS-GFMSNVYSGSALLDTYAKCGC 493
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSG 557
A + P E N V W L+S
Sbjct: 494 MTDAIKSFGEMP-ERNSVSWNALISA 518
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 243/482 (50%), Gaps = 13/482 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ N++ N L+ Y K + A +LF M ++ +++++L++G+S G+ E A
Sbjct: 166 VIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEA 225
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F + ++P+ +T+ +SA D + G+++HG + ++ N V N L++
Sbjct: 226 IELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDY 285
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K + +F E + IS+ +++SY G+ +F + + +F
Sbjct: 286 YSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPF 345
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A++L NL++G QIH F+ V L+++YAKC A ++F NI
Sbjct: 346 ATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIAC 405
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
W+A+I Y Q GK E I++F M +G+ + TF+ +L A A++ GRQL
Sbjct: 406 KSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL 465
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HSL+I+ GF S + + +LD Y+KC + +++K+F EM E + VSWNALI+ + + +
Sbjct: 466 HSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNV 525
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE-----WGKQTHCCIVKPGFDSNVV 415
+ + M+ G+ P+ ++ ++L+ S +E + T V P +
Sbjct: 526 DGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHY-- 583
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVG---YAQHGLGREALEIYSMM 471
+++VD+ + GR ++A K+ + + + W+++L + H L ++A + M
Sbjct: 584 --TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNM 641
Query: 472 QE 473
++
Sbjct: 642 ED 643
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 217/718 (30%), Positives = 364/718 (50%), Gaps = 64/718 (8%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
PNVIT+N ++ Y K ++DA++LFD MP R+V SW+ L+SG+ Q L F M
Sbjct: 69 PNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSM 128
Query: 68 -VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
PN +T+ + +C + G ++ G ++ + V L++M+ +CG
Sbjct: 129 HRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGY 188
Query: 127 LSSAQFVF-------------------------------DASLERNSISWVSLLSSYCQC 155
+ A +F + ER+ +SW ++++ Q
Sbjct: 189 VDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQS 248
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G L + + + GV + + S L ACA L +L G Q+H+ V + + D +VA
Sbjct: 249 GRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVA 308
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
LI LYAKC A RVF+++Q + +W+ LIGG Q ++++LF +M + +
Sbjct: 309 SALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMA 368
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
+ + ++ + + GRQLHSL +K G + V+N+++ Y+KC L+ +
Sbjct: 369 IDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFV 428
Query: 336 FDEMDEHDVVSW-------------------------------NALIAGHLASCHYGEAI 364
F M E D+VSW NA++ ++ + +
Sbjct: 429 FSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGL 488
Query: 365 ELLKDMLFEGH-CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
++ ML + P+ TY + +DI A + G Q VK G NV + +A + M
Sbjct: 489 KMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITM 548
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y+KCGR+++A+K+FD L+ K++VSWN M+ GY+QHG+G++A + + M KP+ ++
Sbjct: 549 YSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISY 608
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ VLS C H GLV+EG YF+ M R HGISP ++H + +V L G A + I P
Sbjct: 609 VAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP 668
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
++P VW LLS CK H + L AA+ + D D+ ++++L+ +Y++A D++A+
Sbjct: 669 MKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQ 728
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
VRK+M++K +KK+ G SW E++NK+H F + Q I + M++L + GYV
Sbjct: 729 VRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYV 786
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 232/497 (46%), Gaps = 68/497 (13%)
Query: 82 AVSACASRGDARSGKEIHGRMYRSGL--------------------------------EL 109
A+ +C SRG + +HGR+ GL E
Sbjct: 10 ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEP 69
Query: 110 NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
N N ++N Y K G LS A+ +FD R+ SW +L+S Y Q + GL+ F+
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 170 KSGVAI-SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
+SG ++ + F+ V+ +C LG ++ Q+ L +K D V L++++ +C +
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189
Query: 229 DLASRVFSNIQLP-------------------------------DLTAWSALIGGYAQLG 257
D ASR+FS I+ P D+ +W+ +I +Q G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+ EA+ L V+M G+ T++ L A A + G+QLH+ +I+ +VA+
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
+++ Y+KC +E+ + F+ + + + VSW LI G L + +++EL M E
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ + + +++ + + G+Q H +K G + +V+ ++L+ +YAKCG L +A VF
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVF 429
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+S +++VSW +M+ Y+Q G +A E + M N T+ +L A + G E
Sbjct: 430 SSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEE 485
Query: 498 EGWHYFNSMIRDHGISP 514
+G +++M+ ++P
Sbjct: 486 DGLKMYSAMLSQKDVTP 502
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 38/285 (13%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG + ++ N L+ +Y K + +A+ +F M ER+++SW+++I+ +SQIG A
Sbjct: 398 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAR 457
Query: 62 NYFRLMVC--------------------------------CVLEPNYYTYVGAVSACASR 89
+F M + P++ TYV CA
Sbjct: 458 EFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADI 517
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
G + G +I G ++GL LN V+N I MY KCG +S AQ +FD ++ +SW +++
Sbjct: 518 GANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMI 577
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG---MQIHSLVFKC 206
+ Y Q G K F G S +VL C+ G ++ G + + V
Sbjct: 578 TGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGI 637
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALI 250
+ + F M ++L + L A + + + P W AL+
Sbjct: 638 SPGLEHFSCM--VDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 680
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 10/156 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G NV N + MY K RI++AQKLFD + ++V+SW+A+I+G+SQ GM + A
Sbjct: 531 VKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAA 590
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-----SGLELNSHVSNC 116
F M+ +P+Y +YV +S C+ G + GK M R GLE H S C
Sbjct: 591 KTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLE---HFS-C 646
Query: 117 LINMYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
++++ G+ G L+ A+ + D ++ + W +LLS+
Sbjct: 647 MVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/571 (33%), Positives = 319/571 (55%), Gaps = 1/571 (0%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
R GK++H + +G + ++N L+NMY KCG L A +FD +RN +SW +++S
Sbjct: 22 RRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGL 81
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
Q + ++ F R G ++F+ +S + ACA LG++++G Q+H L K + +
Sbjct: 82 SQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSEL 141
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
FV L ++Y+KC + A +VF + D +W+A+I GY+++G+ EA+ F KM
Sbjct: 142 FVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDE 201
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
+ + LGA +K GR +HS ++K+GF S FV N + D YSK +E +
Sbjct: 202 EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESA 261
Query: 333 LKTFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
F E +VVS+ LI G++ + + + + ++ +G PN +T+S+++ ++
Sbjct: 262 SNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN 321
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
A+E G Q H ++K FD + + S LVDMY KCG L A + FD + ++WN++
Sbjct: 322 QAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSL 381
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
+ + QHGLG++A++ + M + +KPN TFI +L+ C H GLVEEG YF SM + +G
Sbjct: 382 VSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYG 441
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA 571
+ P +H + V+ L G+ + A EFI P EPN W L C+ H D +G+ AA
Sbjct: 442 VVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAA 501
Query: 572 EKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
EK++ +P+++ A ++LSN+YA W++ VR M++ ++KK G SW ++ K H F
Sbjct: 502 EKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVF 561
Query: 632 STSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
++ + ++E ++ L + GYVP
Sbjct: 562 GAEDWSHXRKSAIYEKLDXLLDQIKAAGYVP 592
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 253/497 (50%), Gaps = 17/497 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G+ P NHL+ MY K ++ A KLFD MP+RN++SW+A+ISG SQ A
Sbjct: 31 LICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEA 90
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M C P + + A+ ACAS G GK++H + G+ V + L +M
Sbjct: 91 IRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDM 150
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A VF+ ++ +SW +++ Y + GE L F V I +
Sbjct: 151 YSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVL 210
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS-NIQ 239
S LGAC L K G +HS V K E D FV L ++Y+K ++ AS VF + +
Sbjct: 211 CSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSE 270
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +++ LI GY + + + + +FV++ G+ P+E TFS ++ A A+ G Q
Sbjct: 271 CRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQ 330
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH+ ++K+ F FV++ ++D Y KC LLE +++ FDE+ + ++WN+L++
Sbjct: 331 LHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGL 390
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG-- 417
+AI+ + M+ G PN T+ ++L S +E G + K VV G
Sbjct: 391 GKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKT---YGVVPGEE 447
Query: 418 --SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMM 471
S ++D+ + GRL +A++ + + N W + L HG +G+ A E
Sbjct: 448 HYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAE----- 502
Query: 472 QENKIKPNDNTFIGVLS 488
+ K++P ++ + +LS
Sbjct: 503 KLVKLEPKNSGALVLLS 519
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 208/420 (49%), Gaps = 37/420 (8%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A V+ A L+ G Q+H+L+ F+ L+N+Y+KC +LD A ++F +
Sbjct: 9 AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ 68
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L +W+A+I G +Q K EAI F M G +P++ FS + A A + G+Q+
Sbjct: 69 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L +K G S FV + + D YSKC + ++ K F+EM D VSW A+I G+ +
Sbjct: 129 HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEF 188
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ K M+ E + + + L + A ++G+ H +VK GF+S++ +G+AL
Sbjct: 189 EEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNAL 248
Query: 421 VDMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
DMY+K G + A VF S +N+VS+ ++ GY + + L ++ ++ I+PN
Sbjct: 249 TDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPN 308
Query: 480 DNTFIGVLSACVHIGLVEEGWH--------------YFNSMIRD---------HGISPRM 516
+ TF ++ AC + +E+G + +S++ D H I
Sbjct: 309 EFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQA-F 367
Query: 517 DHIA--------SVVHLFACRGQTRRAYEFIK---SSPIEPNKVVWRCLLSGCKTHKDLV 565
D I S+V +F G + A +F + ++PN + + LL+GC +H LV
Sbjct: 368 DEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGC-SHAGLV 426
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 187/483 (38%), Positives = 286/483 (59%), Gaps = 2/483 (0%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ +L C L LK G IH+ + E D + ++N+YAKC L+ A +F +
Sbjct: 109 SKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT 168
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+ LI GY+Q G+A EA+ LF KM G P+E T S +L A GRQL
Sbjct: 169 KDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQL 228
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +K G+ V +++LD Y++ + E+ F+ + +VVSWNALIAGH
Sbjct: 229 HAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEG 288
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ L ML +G P +TYS++L +S ++E GK H ++K G IG+ L
Sbjct: 289 EHVMRLFXQMLRQGFEPTHFTYSSVLACASS-GSLEQGKWVHAHVIKSGGQPIAYIGNTL 347
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMYAK G + DA+KVF L +++VSWN+++ GYAQHGLG EAL+++ M + K++PN+
Sbjct: 348 IDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNE 407
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ VL+AC H GL++EG +YF +++ H I ++ H +VV L G+ A +FI+
Sbjct: 408 ITFLSVLTACSHSGLLDEGQYYFE-LMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIE 466
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
PI+P VW LL C+ HK++ LG YAAE+I DP D+ H++LSN+YA A +
Sbjct: 467 EMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSD 526
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
AKVRK+MKE +KK+ CSW E++N++H F + + ++ + ++S + + GY
Sbjct: 527 AAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGY 586
Query: 661 VPD 663
VPD
Sbjct: 587 VPD 589
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 208/417 (49%), Gaps = 4/417 (0%)
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
L+ C LEP Y ++ C + G+ IH + S E + + N ++NMY KCG
Sbjct: 95 LINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCG 154
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L AQ +FD ++ +SW L+S Y Q G+ L +F G +EF+ +S+L
Sbjct: 155 SLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLK 214
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
A + G Q+H+ K + + V L+++YA+ + A +F+++ ++ +
Sbjct: 215 ASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVS 274
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ALI G+A+ G+ + LF +M G P+ T+S VL A A G+ +H+ +I
Sbjct: 275 WNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVI 333
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K G ++ NT++D Y+K ++++ K F + + D+VSWN++I+G+ EA++
Sbjct: 334 KSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQ 393
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L + ML PN T+ ++L S ++ G+ + K ++ V +VD+
Sbjct: 394 LFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLG 453
Query: 426 KCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
+ GRLN+A K + + K + W +L H L +Y+ Q ++ P+D+
Sbjct: 454 RAGRLNEANKFIEEMPIKPTAAVWGALLGACRMH--KNMDLGVYAAEQIFELDPHDS 508
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 213/435 (48%), Gaps = 38/435 (8%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
+S F +++ N +L MY K + +AQ LFD+MP ++++SW+ LISG+SQ G AL
Sbjct: 133 SSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALA 192
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F M+ +PN +T + A + G+++H + G ++N HV + L++MY
Sbjct: 193 LFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYA 252
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
+ + A+ +F++ +N +SW +L++ + + GE H +++F + G + F+ +S
Sbjct: 253 RWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSS 312
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
VL ACA G+L+ G +H+ V K + ++ LI++YAK + A +VF + D
Sbjct: 313 VL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQD 371
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ +W+++I GYAQ G EA+ LF +M + + P+E+TF VL A + G+
Sbjct: 372 IVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFE 431
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYG 361
L+ K + TV+D + L E+ K +EM + W AL L +C
Sbjct: 432 LMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGAL----LGACRMH 487
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+ ++L +Y I + DS + L
Sbjct: 488 KNMDL-----------GVYAAEQIFELDPH-------------------DSGPHV--LLS 515
Query: 422 DMYAKCGRLNDARKV 436
++YA GRL+DA KV
Sbjct: 516 NIYASAGRLSDAAKV 530
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 153/288 (53%), Gaps = 3/288 (1%)
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
L P +S +L +++ GR +H+ I F + N +L+ Y+KC LEE+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
FD+M D+VSW LI+G+ S EA+ L ML G PN +T S++L S P
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+ G+Q H +K G+D NV +GS+L+DMYA+ + +A+ +F+ L++KN+VSWN ++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
G+A+ G G + ++ M +P T+ VL AC G +E+G + ++ + G
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQG-KWVHAHVIKSGGQ 338
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
P +++ ++A G + A + + ++ + V W ++SG H
Sbjct: 339 PIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQH 385
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 83/152 (54%), Gaps = 1/152 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG P N L+ MY K I DA+K+F + +++++SW+++ISG++Q G+ A
Sbjct: 332 VIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEA 391
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ ++PN T++ ++AC+ G G+ M + +E ++++
Sbjct: 392 LQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDL 451
Query: 121 YGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
G+ G L+ A +F+ + ++ + W +LL +
Sbjct: 452 LGRAGRLNEANKFIEEMPIKPTAAVWGALLGA 483
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 185/483 (38%), Positives = 284/483 (58%), Gaps = 1/483 (0%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ +L C L LK G IH+ + E D + ++N+YAKC L+ A +F +
Sbjct: 109 SKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT 168
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+ LI GY+Q G+A EA+ LF KM G P+E T S +L A GRQL
Sbjct: 169 KDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQL 228
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +K G+ V +++LD Y++ + E+ F+ + +VVSWNALIAGH
Sbjct: 229 HAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEG 288
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ L ML +G P +TYS++ + ++E GK H ++K G IG+ L
Sbjct: 289 EHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTL 348
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMYAK G + DA+KVF L +++VSWN+++ GYAQHGLG EAL+++ M + K++PN+
Sbjct: 349 IDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNE 408
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ VL+AC H GL++EG +YF +++ H I ++ H +VV L G+ A +FI+
Sbjct: 409 ITFLSVLTACSHSGLLDEGQYYFE-LMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIE 467
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
PI+P VW LL C+ HK++ LG YAAE+I DP D+ H++LSN+YA A +
Sbjct: 468 EMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSD 527
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
AKVRK+MKE +KK+ CSW E++N++H F + + ++ + ++S + + GY
Sbjct: 528 AAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGY 587
Query: 661 VPD 663
VPD
Sbjct: 588 VPD 590
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 213/435 (48%), Gaps = 37/435 (8%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
+S F +++ N +L MY K + +AQ LFD+MP ++++SW+ LISG+SQ G AL
Sbjct: 133 SSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALA 192
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F M+ +PN +T + A + G+++H + G ++N HV + L++MY
Sbjct: 193 LFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYA 252
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
+ + A+ +F++ +N +SW +L++ + + GE H +++FL + G + F+ +S
Sbjct: 253 RWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSS 312
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
V ACA G+L+ G +H+ V K + ++ LI++YAK + A +VF + D
Sbjct: 313 VFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQD 372
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ +W+++I GYAQ G EA+ LF +M + + P+E+TF VL A + G+
Sbjct: 373 IVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFE 432
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYG 361
L+ K + TV+D + L E+ K +EM + W AL L SC
Sbjct: 433 LMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGAL----LGSCRMH 488
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+ ++L +Y I + DS + L
Sbjct: 489 KNMDL-----------GVYAAEQIFELDPH-------------------DSGPHV--LLS 516
Query: 422 DMYAKCGRLNDARKV 436
++YA GRL+DA KV
Sbjct: 517 NIYASAGRLSDAAKV 531
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 208/417 (49%), Gaps = 3/417 (0%)
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
L+ C LEP Y ++ C + G+ IH + S E + + N ++NMY KCG
Sbjct: 95 LINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCG 154
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L AQ +FD ++ +SW L+S Y Q G+ L +F G +EF+ +S+L
Sbjct: 155 SLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLK 214
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
A + G Q+H+ K + + V L+++YA+ + A +F+++ ++ +
Sbjct: 215 ASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVS 274
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ALI G+A+ G+ + LF++M G P+ T+S V A A G+ +H+ +I
Sbjct: 275 WNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVI 334
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K G ++ NT++D Y+K ++++ K F + + D+VSWN++I+G+ EA++
Sbjct: 335 KSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQ 394
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L + ML PN T+ ++L S ++ G+ + K ++ V +VD+
Sbjct: 395 LFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLG 454
Query: 426 KCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
+ GRLN+A K + + K + W +L H L +Y+ Q ++ P+D+
Sbjct: 455 RAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMH--KNMDLGVYAAEQIFELDPHDS 509
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 153/288 (53%), Gaps = 2/288 (0%)
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
L P +S +L +++ GR +H+ I F + N +L+ Y+KC LEE+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
FD+M D+VSW LI+G+ S EA+ L ML G PN +T S++L S P
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+ G+Q H +K G+D NV +GS+L+DMYA+ + +A+ +F+ L++KN+VSWN ++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
G+A+ G G + ++ M +P T+ V +AC G +E+G + ++ + G
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQG-KWVHAHVIKSGGQ 339
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
P +++ ++A G + A + + ++ + V W ++SG H
Sbjct: 340 PIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQH 386
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 83/152 (54%), Gaps = 1/152 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG P N L+ MY K I DA+K+F + +++++SW+++ISG++Q G+ A
Sbjct: 333 VIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEA 392
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ ++PN T++ ++AC+ G G+ M + +E ++++
Sbjct: 393 LQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDL 452
Query: 121 YGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
G+ G L+ A +F+ + ++ + W +LL S
Sbjct: 453 LGRAGRLNEANKFIEEMPIKPTAAVWGALLGS 484
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 205/662 (30%), Positives = 357/662 (53%), Gaps = 1/662 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N I+ N ++ ++KF +++ A++LFD M ER +SW+ LI G+ Q + A + M
Sbjct: 73 NTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMR 132
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+EP+Y T V +S +IH + + G E N V N L++ Y K L
Sbjct: 133 RGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLY 192
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A +F L ++++++ SL++ Y G + +++FL SG+ S+F+ A++L A
Sbjct: 193 LASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAV 252
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L + K G Q+H V K ++ FV L++ Y+K +++D ++F + D +++
Sbjct: 253 GLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNV 312
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I YA G+ E+ DLF K+ + + F+ +L GRQ+H I +G
Sbjct: 313 VITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVG 372
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
+ + V N ++D Y+KC +E+ K FD + V W A+I+ ++ + E I +
Sbjct: 373 ANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFS 432
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
DM G + T+++IL +++ +I G+Q H +++ GF SNV GSAL+D YAKCG
Sbjct: 433 DMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCG 492
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ DA K F + +N VSWN ++ YAQ+G L + M ++ KP+ +F+ VLS
Sbjct: 493 CMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H G VEE +FNSM + + ++P+ +H S+V + G+ A + + P EP++
Sbjct: 553 ACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSE 612
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILS-TDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
++W +L+ C+ HK+ L + AA+++ + D D + +I +SN+YA A WD AKV+K
Sbjct: 613 IMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKA 672
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
M+++ ++K SW E++++ H FS + + + + +N LS + GY PD +
Sbjct: 673 MRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCA 732
Query: 668 SH 669
H
Sbjct: 733 LH 734
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/506 (28%), Positives = 258/506 (50%), Gaps = 12/506 (2%)
Query: 57 PEVALNYFRLMVCCVLE----PNYYTYVGAVSACASRGDARSGKEIHGRM-YRSGLELNS 111
P+ +LN L+ +++ PN V+ RGD ++ +M ++ + LN
Sbjct: 20 PKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNM 79
Query: 112 HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
+S L K G LS A+ +FD +ER ++SW L+ Y Q + +++ R+
Sbjct: 80 MISGHL-----KFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRG 134
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G+ + ++L L V +QIH+ V K E++ V L++ Y K L LA
Sbjct: 135 GIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLA 194
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
S++F ++ D +++L+ GY+ G EAI+LF+++ +SG+ PS+ TF+ +L A +
Sbjct: 195 SQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGL 254
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
+T G+Q+H ++K F FV N +LD+YSK + ++E K F EM E D +S+N +I
Sbjct: 255 DDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVI 314
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
+ + + E+ +L + + F + ++ +L+I++ + G+Q HC + G +
Sbjct: 315 TSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGAN 374
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+ +ALVDMYAKC +A+K+FD+++ K+ V W M+ Y Q G E + ++S M
Sbjct: 375 FESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDM 434
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
+ + + TF +L AC ++ + G + +IR G + ++++ +A G
Sbjct: 435 RRTGVPADQATFASILRACANLASISLGRQLHSLLIRS-GFMSNVYSGSALLDTYAKCGC 493
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSG 557
A + P E N V W L+S
Sbjct: 494 MTDAIKSFGEMP-ERNSVSWNALISA 518
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 243/482 (50%), Gaps = 13/482 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ N++ N L+ Y K + A +LF M ++ +++++L++G+S G+ E A
Sbjct: 166 VIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEA 225
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F + ++P+ +T+ +SA D + G+++HG + ++ N V N L++
Sbjct: 226 IELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDY 285
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K + +F E + IS+ +++SY G+ +F + + +F
Sbjct: 286 YSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPF 345
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A++L NL++G QIH F+ V L+++YAKC A ++F NI
Sbjct: 346 ATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIAC 405
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
W+A+I Y Q GK E I++F M +G+ + TF+ +L A A++ GRQL
Sbjct: 406 KSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL 465
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HSL+I+ GF S + + +LD Y+KC + +++K+F EM E + VSWNALI+ + + +
Sbjct: 466 HSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNV 525
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE-----WGKQTHCCIVKPGFDSNVV 415
+ + M+ G+ P+ ++ ++L+ S +E + T V P +
Sbjct: 526 DGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHY-- 583
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVG---YAQHGLGREALEIYSMM 471
+++VD+ + GR ++A K+ + + + W+++L + H L ++A + M
Sbjct: 584 --TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNM 641
Query: 472 QE 473
++
Sbjct: 642 ED 643
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 191/567 (33%), Positives = 321/567 (56%), Gaps = 3/567 (0%)
Query: 106 GLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF 165
G + +SN LI MYGKCG L A VFD L+RN +SW +L+ + Q G + L +F
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 166 LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC 225
SGV ++F+ ++ L AC +L L +G QIH + K + V +I++Y+KC
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 226 EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
+++ A+ +F + + +L +W+A+I GY G +A+ LF KM G E TF+ L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181
Query: 286 GAFADVKETIGGRQLHSLIIKMGF--SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHD 343
A +D+ G Q+H+ +I GF S T VA ++D Y KC L + + F ++E
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH 241
Query: 344 VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHC 403
V+SW ALI G+ + E++EL + + + + S+++ + +D ++ GKQ H
Sbjct: 242 VISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHA 301
Query: 404 CIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGRE 463
+K ++ + ++++DMY KCG +N+A ++F + ++N++SW M+ GY +HGLG+E
Sbjct: 302 FAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKE 361
Query: 464 ALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV 523
A+ ++ MQ + +P+D T++ VL C H GLVE+G YF+ + HGI R++H A +V
Sbjct: 362 AIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMV 421
Query: 524 HLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTS 583
L G+ + A + S P+E N +W+ LLS C+ H DL LG+ +L D E+
Sbjct: 422 DLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPV 481
Query: 584 AHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGID 643
++M+SN+YA+A W E ++R+++K K LKK+ G SW E+ ++H+F
Sbjct: 482 NYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEK 541
Query: 644 LHEVMNQLSVHLFDG-GYVPDPIYSSH 669
+HE++ ++ + + GYV Y+ H
Sbjct: 542 IHEILKEMERRMKEELGYVYGVKYALH 568
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/466 (32%), Positives = 247/466 (53%), Gaps = 7/466 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF +++ N L++MY K R+ A +FD M +RNV+SW+AL+ G Q G P +L F
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M ++PN +T+ + AC G++IH ++G ++ + V N +I+MY KC
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G ++ A +F+ RN ISW ++++ Y G L +F ++ G + EF+ S L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEF--DKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
AC+ LG +K G QIH+ + + + VA LI+LY KC KL +A RVFS+I+
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH 241
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ +W+ALI GYAQ G E+++LF ++ S + S ++G FAD G+Q+H+
Sbjct: 242 VISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHA 301
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
IK+ V N++LD Y KC ++ E+ + F EM +V+SW +I G+ E
Sbjct: 302 FAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKE 361
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-PGFDSNVVIGSALV 421
AI L +M + P+ TY +L S +E G++ + G + V + +V
Sbjct: 362 AIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMV 421
Query: 422 DMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGRE 463
D+ + GRL +A+ + D + N+ W T+L HG LG+E
Sbjct: 422 DLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKE 467
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 195/397 (49%), Gaps = 11/397 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + N ++ MY K RIN+A +F+ MP RN+ISW+A+I+G++ G E AL
Sbjct: 100 VKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKAL 159
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL--ELNSHVSNCLIN 119
F+ M + +T+ + AC+ G + G +IH + G +N+ V+ LI+
Sbjct: 160 VLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALID 219
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y KCG L A+ VF E++ ISW +L+ Y Q G +++F R+S + + F
Sbjct: 220 LYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFI 279
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+S++G A ++ G Q+H+ K D V ++++Y KC ++ A R+FS +
Sbjct: 280 LSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMP 339
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+ +I GY + G EAI LF +M P +VT+ VL + G++
Sbjct: 340 ARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQE 399
Query: 300 LHSLIIKM-GFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLAS 357
S + G + ++D + L+E+ D M E +V W L L++
Sbjct: 400 YFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTL----LSA 455
Query: 358 CHYGEAIELLKD---MLFEGHCPNLYTYSNILNISSD 391
C +EL K+ +L N Y + NI +D
Sbjct: 456 CRVHGDLELGKEVGGILLRLDSENPVNYVMMSNIYAD 492
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 111/193 (57%)
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
MGF ++N ++ Y KC L + FD M + +VVSW AL+ GH+ + + E++ L
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M G PN +T+S L + ++ G+Q H VK GFD V+G++++DMY+K
Sbjct: 61 FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CGR+N+A +F+ + +NL+SWN M+ GY G +AL ++ MQE ++ TF
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180
Query: 487 LSACVHIGLVEEG 499
L AC +G ++EG
Sbjct: 181 LKACSDLGAIKEG 193
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 207/675 (30%), Positives = 353/675 (52%), Gaps = 17/675 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N+I NH++ MY DA+ FD + +RN+ SW+ L++ F+ G + L M
Sbjct: 78 NLILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMR 137
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ P+ T++ A+ +C R G IH + S LE++ VSN L+NMY KCG LS
Sbjct: 138 QDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLS 197
Query: 129 SAQFVFDASLER--NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
A+ VF A +ER N ISW + ++ G L+ F G+ ++ + ++L A
Sbjct: 198 HAKRVF-AKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSA 256
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ--LPDLT 244
C+ ++ G IHS + E + VA ++ +Y +C ++ A +VF + L D+
Sbjct: 257 CSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVV 316
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ ++ Y + +AI L+ +M L +VT+ +L A + ++ GR LH I
Sbjct: 317 SWNIMLSAYVHNDRGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQI 373
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL------ASC 358
+ V N ++ Y+KC E+ FD+M++ ++SW +I+ ++ +C
Sbjct: 374 VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEAC 433
Query: 359 H-YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
H + + +EL K+ + P+ + ILN +D+ A+E GK G S+ +G
Sbjct: 434 HLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVG 493
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKI 476
+A+V++Y KCG + + R++FD + S+ V WN M+ YAQ G EAL+++ M+ +
Sbjct: 494 TAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGV 553
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH-GISPRMDHIASVVHLFACRGQTRRA 535
+P+ +F+ +L AC H GL ++G YF SM ++ ++ + H V L G+ + A
Sbjct: 554 RPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEA 613
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
EF++ P++P+ V W LL+ C+ H+DL + A K+L +P + ++ LSN+YAE
Sbjct: 614 EEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAEL 673
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
W AKVRK M E+ +KK+ G S E+ MH F+T A + ++ E + +L +
Sbjct: 674 QKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQM 733
Query: 656 FDGGYVPDPIYSSHF 670
+ GYVPD HF
Sbjct: 734 KECGYVPDTKMVLHF 748
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 194/401 (48%), Gaps = 26/401 (6%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPEVAL 61
SGF ++ N ++ MY + + +A+K+FD M E R+V+SW+ ++S + + A+
Sbjct: 276 SGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAI 335
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
++ M L + TYV +SAC+S D G+ +H ++ LE N V N L++MY
Sbjct: 336 QLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMY 392
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ---CGEHVHGLKIFLLSRKSG----VA 174
KCG + A+ VFD +R+ ISW +++S+Y + E H + L K+G V
Sbjct: 393 AKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVK 452
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ ++L ACA + L+ G + C L DK V ++NLY KC +++ R+
Sbjct: 453 PDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRI 512
Query: 235 FSNI-QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
F + PD+ W+A+I YAQ G++ EA+ LF +M G+ P +F +L A +
Sbjct: 513 FDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGL 572
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE--SLKTFDEMDEH-----DVVS 346
G+ + + + + V T+ F +LL LK +E E D V+
Sbjct: 573 EDQGKSYFTSMT----TEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVA 628
Query: 347 WNALIAGHLASCHYGEAIELLKDML-FEGHCPNLY-TYSNI 385
W +L+A A E+ +L E C Y SNI
Sbjct: 629 WTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNI 669
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 165/325 (50%), Gaps = 7/325 (2%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK-CALEFDKFVAMGLINLYAKCEKL 228
K V + A +L CA L G +IHSL K L + + ++++YA C+
Sbjct: 36 KQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSP 95
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
A F ++ +L +W+ L+ +A G++ E + +M G+ P VTF LG+
Sbjct: 96 GDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSC 155
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSW 347
D + G ++H +++ V+N +L+ Y KC L + + F +M+ +V+SW
Sbjct: 156 GDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISW 215
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
+ + H + EA+ + ML G IL+ S ++ G+ H CI
Sbjct: 216 SIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIAL 275
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGREAL 465
GF+S +++ +A++ MY +CG + +ARKVFD + +++VSWN ML Y + G++A+
Sbjct: 276 SGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAI 335
Query: 466 EIYSMMQENKIKPNDNTFIGVLSAC 490
++Y MQ ++ + T++ +LSAC
Sbjct: 336 QLYQRMQ---LRADKVTYVSLLSAC 357
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 129/286 (45%), Gaps = 20/286 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ NVI N L+ MY K +A+ +FD+M +R++ISW+ +IS + + + A
Sbjct: 373 IVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEA 432
Query: 61 LNYFRLMV-------CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV 113
+ F+ M+ ++P+ +V ++ACA GK + + GL + V
Sbjct: 433 CHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAV 492
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
++N+YGKCG + + +FD R + W ++++ Y Q G+ LK+F G
Sbjct: 493 GTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEG 552
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM-----GLINLYAKCEK 227
V FS S+L AC+ G + Q S E+ + +L + +
Sbjct: 553 VRPDSFSFVSILLACSHTG---LEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGR 609
Query: 228 LDLASRVFSNIQL-PDLTAWSALIGG---YAQLGKACEAIDLFVKM 269
L A + + PD AW++L+ + L +A E + +++
Sbjct: 610 LKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRL 655
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 195/593 (32%), Positives = 327/593 (55%), Gaps = 10/593 (1%)
Query: 81 GAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
G + A A R G ++HG + + G ++ + N LI+MY KCG L A VF +R
Sbjct: 9 GLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDR 68
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRK-SGVAISEFSCASVLGACAVLGNLKVGMQI 199
N +SW +L+ + + G+ L++ R S A +E++ ++ L AC V+G+ G+ I
Sbjct: 69 NVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGI 128
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALIGGYAQLGK 258
H L + + VA L+ +Y+K ++ A RVF L + W+A++ GYA G
Sbjct: 129 HGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGH 188
Query: 259 ACEAIDLFVKM--FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS--SFTF 314
+A+ +F +M P E TF+ +L A + + T G Q+H+ + GFS S
Sbjct: 189 GRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAI 248
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
+A ++D Y KC L +++ F+ ++ +V+ W A++ GH EA+EL + G
Sbjct: 249 LAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSG 308
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P+ + S+++ + +D +E G+Q HC +K ++V G+++VDMY KCG ++A
Sbjct: 309 ARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAE 368
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
++F + + N+VSW TM+ G +HGLGREA+ ++ M+ ++P++ T++ +LSAC H G
Sbjct: 369 RMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAG 428
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
LV+E YF+ + RD + P+ +H A +V L G+ R A + I++ P+EP VW+ L
Sbjct: 429 LVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTL 488
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
LS C+ HKD+ +GR A + +L+ D ++ ++ LSNV AEA W E KVR M+ + LK
Sbjct: 489 LSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLK 548
Query: 615 KDTGCSWTELQNKMHYF---STSRFAQFQGIDLHEVMNQLSVHLFDG-GYVPD 663
K GCSW E+ ++H+F Q D+ V+ + + + GY D
Sbjct: 549 KQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNAD 601
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 145/482 (30%), Positives = 241/482 (50%), Gaps = 19/482 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + + N+L+ MYVK ++ A ++F M +RNV+SW+AL+ GF + G L
Sbjct: 34 GFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLL 93
Query: 65 -RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+ PN YT ++ AC GD +G IHG R+G + + V++ L+ +Y K
Sbjct: 94 GEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSK 153
Query: 124 CGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGV-AISEFSC 180
G + A+ VFD A L +W +++S Y G L +F + R G EF+
Sbjct: 154 GGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTF 213
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEF--DKFVAMGLINLYAKCEKLDLASRVFSNI 238
AS+L AC+ LG + G Q+H+ + + +A L+++Y KC +L +A +VF +
Sbjct: 214 ASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERL 273
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ ++ W+A++ G+AQ G+ EA++LF + + SG P S V+G AD GR
Sbjct: 274 ERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGR 333
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H IK + N+++D Y KC L +E+ + F EM +VVSW ++ G
Sbjct: 334 QVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHG 393
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSN 413
EA+ L ++M G P+ TY +L+ S ++ ++ CI V+P +
Sbjct: 394 LGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHY 453
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQH---GLGREALEIYS 469
+ +VD+ + G L +AR + + + V W T+L H +GREA ++
Sbjct: 454 ----ACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLL 509
Query: 470 MM 471
M
Sbjct: 510 AM 511
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 219/436 (50%), Gaps = 21/436 (4%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L A A +L+ G+Q+H + K D + LI++Y KC +LDLA VF ++
Sbjct: 8 AGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRD 67
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+AL+ G+ + G A + L +M + S P+E T S L A V +T G
Sbjct: 68 RNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVG 127
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASC 358
+H L ++ G+ VA++++ YSK + ++ + FD + +WNA+++G+ +
Sbjct: 128 IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAG 187
Query: 359 HYGEAIELLKDM-LFEG-HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD--SNV 414
H +A+ + ++M EG H P+ +T++++L S + A G Q H + GF SN
Sbjct: 188 HGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNA 247
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
++ ALVDMY KC RL A +VF+ L KN++ W ++VG+AQ G EALE++ +
Sbjct: 248 ILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRS 307
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA---SVVHLFACRGQ 531
+P+ + V+ LVE+G I+D P ++ S+V ++ G
Sbjct: 308 GARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKD----PTGTDVSAGNSIVDMYLKCGL 363
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA---EKILSTDPE-DTSAHIM 587
A + PN V W +++G H LGR A E++ + E D ++
Sbjct: 364 PDEAERMFREMRA-PNVVSWTTMVNGLGKHG---LGREAVALFEEMRAGGVEPDEVTYLA 419
Query: 588 LSNVYAEANMWDETAK 603
L + + A + DE +
Sbjct: 420 LLSACSHAGLVDECRR 435
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 149/291 (51%), Gaps = 5/291 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQIGMPEVA 60
+ +G+ + + + L+L+Y K RI DA+++FD + +W+A++SG++ G A
Sbjct: 133 VRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDA 192
Query: 61 LNYFRLMVC--CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL--NSHVSNC 116
L FR M +P+ +T+ + AC+ G R G ++H M SG N+ ++
Sbjct: 193 LLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGA 252
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
L++MY KC L A VF+ +N I W +++ + Q G+ L++F +SG
Sbjct: 253 LVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPD 312
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+SV+G A ++ G Q+H K D ++++Y KC D A R+F
Sbjct: 313 SHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFR 372
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
++ P++ +W+ ++ G + G EA+ LF +M + G+ P EVT+ +L A
Sbjct: 373 EMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSA 423
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 141/344 (40%), Gaps = 32/344 (9%)
Query: 1 MITSGFHP--NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPE 58
M SGF N I L+ MYVK R+ A ++F+ + +NVI W+A++ G +Q G
Sbjct: 236 MTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVT 295
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
AL FR P+ + V A G+++H + + N ++
Sbjct: 296 EALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIV 355
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+MY KCGL A+ +F N +SW ++++ + G + +F R GV E
Sbjct: 356 DMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEV 415
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEF-----DKFVAMG------LINLYAKCEK 227
+ ++L AC+ G LV +C F D+ V +++L + +
Sbjct: 416 TYLALLSACSHAG----------LVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGE 465
Query: 228 LDLASRVFSNIQL-PDLTAWSALIGG---YAQLGKACEAIDLFVKMFSSGLMP-SEVTFS 282
L A + + + P + W L+ + + EA D+ + M G P + VT S
Sbjct: 466 LREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAM--DGDNPVNYVTLS 523
Query: 283 YVLGAFADVKE--TIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
VL + +E + + K G S+ V V FY
Sbjct: 524 NVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYG 567
>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 993
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 215/672 (31%), Positives = 352/672 (52%), Gaps = 4/672 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG +V N L+ M+ R+ DA++LFD M ER+ ISW+A+IS +S +
Sbjct: 171 VVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKC 230
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
M ++P+ T VS CAS G IH SGL + + N L+NM
Sbjct: 231 FIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNM 290
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEF 178
Y G L A+ +F R+ ISW +++SSY Q V L+ LL G S
Sbjct: 291 YSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNS-M 349
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +S LGAC+ L G IH+++ + +L+ + L+ +Y+KC ++ RVF ++
Sbjct: 350 TFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESM 409
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-G 297
D+ + + L GGYA L A+ +F M +G+ P+ +T + G + + G
Sbjct: 410 PCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYG 469
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
LH+ + + G S ++ N+++ Y+ C LE S F ++ V+SWNA+IA ++
Sbjct: 470 MPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRH 529
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EAI+L D G+ + + + L+ S+++ ++E G Q H VK G D + +
Sbjct: 530 GRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVV 589
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+A +DMY KCG+++ K + + WNT++ GYA++G +EA + + M K
Sbjct: 590 NATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQK 649
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ TF+ +LSAC H GL+++G Y+NSM G+SP + H +V L G+ A +
Sbjct: 650 PDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEK 709
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FI P+ PN ++WR LLS +THK+L +GR AA+ +L DP D SA+++LSN+YA
Sbjct: 710 FIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNAR 769
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
W + K+R MK L K CSW +L+N++ F + ++ ++++ + L +
Sbjct: 770 WVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLRE 829
Query: 658 GGYVPDPIYSSH 669
GYV D + H
Sbjct: 830 VGYVADTSSALH 841
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 220/464 (47%), Gaps = 6/464 (1%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRG---DA 92
MP R SW +SG ++ G+ A R+M + + + V+AC RG A
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
G IH +R+GL N ++ L+++YG GL+ +AQ +F +RN +SW +++ +
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
G L + RK GV + + A+V+ C L + G+Q+ + V L
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
VA LI ++ ++ A R+F ++ D +W+A+I Y+ + + M
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
+ P T ++ A G +HSL + G + N +++ YS L+E+
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEA 300
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF--EGHCPNLYTYSNILNISS 390
F M DV+SWN +I+ ++ S EA+E L +L EG PN T+S+ L S
Sbjct: 301 ESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGP-PNSMTFSSALGACS 359
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
A+ G+ H I++ + ++IG++L+ MY+KC + D +VF+ + ++VS N
Sbjct: 360 SPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNV 419
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+ GYA A+ ++S M+ IKPN T I + C +G
Sbjct: 420 LTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG 463
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/406 (19%), Positives = 168/406 (41%), Gaps = 44/406 (10%)
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG---GRQL 300
++W + G A+ G A L M + S + ++ A G G +
Sbjct: 7 SSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAI 66
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+L + G ++ +L Y L+ + + F EM + +VVSW A++ ++
Sbjct: 67 HALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCM 126
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ + M EG N + ++++ + G Q +V G ++V + ++L
Sbjct: 127 EEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSL 186
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ M+ R+ DA ++FD + ++ +SWN M+ Y+ + + + S M+ ++KP+
Sbjct: 187 ITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDV 246
Query: 481 NTFIGVLSAC-----------VHIGLVEEGWH----YFNSMIRDHGISPRMDH------- 518
T ++S C +H V G H N+++ + + ++D
Sbjct: 247 TTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRN 306
Query: 519 ------------IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVL 566
I+S V +C + +++ PN + + L C + + L+
Sbjct: 307 MSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMN 366
Query: 567 GRYAAEKILSTDPEDTSAHIMLSN----VYAEANMWDETAKVRKIM 608
GR IL ++ +++ N +Y++ N ++T +V + M
Sbjct: 367 GRTIHAMILQRSLQNV---LLIGNSLLTMYSKCNSMEDTERVFESM 409
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 213/665 (32%), Positives = 354/665 (53%), Gaps = 10/665 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I+ NV N ++ Y K + A+ FD + +N SW ++++ ++Q G AL
Sbjct: 50 ISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAAL 109
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
+ ++ M L+PN Y + ACAS GK IH R+ + GL+L+ + N L+ M
Sbjct: 110 DLYKRMD---LQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTM 166
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L A+ +F+ R+ SW +++++Y Q G ++++ V S +
Sbjct: 167 YAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLY---EDMDVEPSVRTF 223
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL AC+ LG L G +IH+L+ E D + L+ +YA+C+ LD A+++F +
Sbjct: 224 TSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPR 283
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +WSA+I +A+ EAI+ + KM G+ P+ TF+ VL A A V + GR +
Sbjct: 284 RDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAV 343
Query: 301 HSLIIKMGFSSFTFVANTVL-DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H I+ G+ T V T L D Y+ L+E+ FD+++ D W LI G+ H
Sbjct: 344 HDQILGNGYK-ITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGH 402
Query: 360 YGEAIELLKDMLFEGHCP-NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+EL ++M P YS +++ + + A +Q H I G S+ V+ +
Sbjct: 403 RTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLAT 462
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+LV+MY++ G L AR+VFD +SS++ ++W T++ GYA+HG AL +Y M+ +P
Sbjct: 463 SLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEP 522
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
++ TF+ VL AC H GL E+G F S+ D+ + P + H + ++ L + G+ A E
Sbjct: 523 SELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEEL 582
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I + P+EPN V W LL + HKD+ +AA +I DP D +++++LSNV+A
Sbjct: 583 INAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNL 642
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
A VR M + +KK G SW E+ +++H F+ + + ++ + +LS + +
Sbjct: 643 AGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEA 702
Query: 659 GYVPD 663
GYVP+
Sbjct: 703 GYVPE 707
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 157/333 (47%), Gaps = 15/333 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ ++ L+ +Y + +++A+ LFD++ R+ W+ LI G+S+ G
Sbjct: 347 ILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGV 406
Query: 61 LNYFRLMVCCVLEP-NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L +R M P Y +SACAS G ++ H + G+ + ++ L+N
Sbjct: 407 LELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVN 466
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY + G L SA+ VFD R++++W +L++ Y + GEH L ++ G SE +
Sbjct: 467 MYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELT 526
Query: 180 CASVLGACAVLGNLKVGMQIH-SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
VL AC+ G + G Q+ S+ A+ + +I+L ++ +L A + + +
Sbjct: 527 FMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAM 586
Query: 239 QL-PDLTAWSALIGG---YAQLGKACEAIDLFVKM-----FSSGLMPSEVTFSYVLGAFA 289
+ P+ WS+L+G + + +A A K+ S L+ + + L A
Sbjct: 587 PVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMA 646
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
V+ T+ R + K SS+ VA+ + +F
Sbjct: 647 SVRNTMVARG----VKKRRGSSWIEVADQIHEF 675
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 195/658 (29%), Positives = 349/658 (53%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
T G ++ + L+ MY + DA+++FD M ER+ + W+ ++ G+ + G A+
Sbjct: 174 TLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVE 233
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F M EPN+ T +S A+ D G ++H + GLE V+N L++MY
Sbjct: 234 LFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYA 293
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KC L +F + ++W ++S Q G L +F +KSG+ + S
Sbjct: 294 KCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVS 353
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L A L G ++H + + + D F+ L+++Y KC + +A V+ + + D
Sbjct: 354 LLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAID 413
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ S +I GY G + EA+ +F + G+ P+ V + VL A A + G++LHS
Sbjct: 414 VVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHS 473
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
+K + +V + ++D Y+KC L+ S F ++ D V+WN++I+ + E
Sbjct: 474 YALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEE 533
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+ L ++M EG + T S++L+ + +PAI +GK+ H ++K +++ SAL+D
Sbjct: 534 ALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALID 593
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MY KCG L A +VF+ + KN VSWN+++ Y +GL +E++ + MQE K + T
Sbjct: 594 MYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVT 653
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F+ ++SAC H G V+EG F M ++ I+PRM+H A +V L++ G+ +A E I
Sbjct: 654 FLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDM 713
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
P +P+ +W LL C+ H+++ L A++++ DP ++ ++++SN+ A A WD +
Sbjct: 714 PFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVS 773
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
KVR++MK+ ++K G SW ++ N H F + + D++ + + + L + G+
Sbjct: 774 KVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGH 831
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/563 (28%), Positives = 282/563 (50%), Gaps = 12/563 (2%)
Query: 2 ITSGFHP-NVITYNHLLLMYVKFSRINDAQKLFDEMPERNV---ISWSALISGFSQIGMP 57
+T+G H + L+ MYV R DA +F +P + W+ LI G + G
Sbjct: 66 VTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDY 125
Query: 58 EVALNYFRLMVC--CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
AL ++ M P+ +T+ V +CA+ G G+ +H GL+ + V +
Sbjct: 126 RSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGS 185
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
LI MY GLL A+ VFD ER+ + W ++ Y + G +++F R SG
Sbjct: 186 ALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEP 245
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ + A L A +L G+Q+H+L K LE + VA L+++YAKC+ LD ++F
Sbjct: 246 NFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLF 305
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ DL W+ +I G Q G +A+ LF M SG+ P VT +L A D+
Sbjct: 306 GLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFN 365
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G++LH I++ F+ + ++D Y KC + + +D DVV + +I+G++
Sbjct: 366 QGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYV 425
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+ EA+++ + +L +G PN +++L + + A++ G++ H +K ++
Sbjct: 426 LNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCY 485
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ SAL+DMYAKCGRL+ + +F +S+K+ V+WN+M+ +AQ+G EAL ++ M
Sbjct: 486 VESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG 545
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA--SVVHLFACRGQTR 533
+K ++ T VLSAC + + G +I+ R D A +++ ++ G
Sbjct: 546 VKYSNVTISSVLSACASLPAIYYGKEIHGVVIKG---PIRADLFAESALIDMYGKCGNLE 602
Query: 534 RAYEFIKSSPIEPNKVVWRCLLS 556
A+ +S P E N+V W +++
Sbjct: 603 WAHRVFESMP-EKNEVSWNSIIA 624
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 208/427 (48%), Gaps = 8/427 (1%)
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLE-LNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
+ + C S G ++HGR +GL ++ + L+ MY A VF +SL
Sbjct: 43 LAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVF-SSL 101
Query: 139 ERN----SISWVSLLSSYCQCGEHVHGLKIFL--LSRKSGVAISEFSCASVLGACAVLGN 192
R ++ W L+ G++ L +L + S + V+ +CA LG
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+ +G +H L+ D FV LI +YA L A +VF + D W+ ++ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y + G A++LF M +SG P+ T + L A + G QLH+L +K G S
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
VANT++ Y+KC+ L++ K F M D+V+WN +I+G + + +A+ L DM
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK 341
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
G P+ T ++L +D+ GK+ H IV+ +V + SALVD+Y KC +
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRM 401
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A+ V+D + ++V +TM+ GY +G+ +EA++++ + E I+PN VL AC
Sbjct: 402 AQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACAS 461
Query: 493 IGLVEEG 499
+ ++ G
Sbjct: 462 MAAMKLG 468
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 165/336 (49%), Gaps = 10/336 (2%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALE-FDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL C +L +G+Q+H L D + L+ +Y + A VFS+ L
Sbjct: 44 AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSS--L 101
Query: 241 PDLTA-----WSALIGGYAQLGKACEAIDLFVKMFS--SGLMPSEVTFSYVLGAFADVKE 293
P A W+ LI G G A+ ++KM++ S +P TF YV+ + A +
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
GR +H +G FV + ++ Y+ LL ++ + FD M E D V WN ++ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
++ + A+EL DM G PN T + L++S+ + +G Q H VK G +S
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V + + LV MYAKC L+D K+F + +LV+WN M+ G Q+G +AL ++ MQ+
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK 341
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
+ I+P+ T + +L A + +G ++R+
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRN 377
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 191/657 (29%), Positives = 356/657 (54%), Gaps = 5/657 (0%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H N+ + N +L Y + AQ LF P RN +W+ ++ + G AL+ FR
Sbjct: 71 HKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRA 130
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ + P+ T ++ + +H + GL+ + V N L++ Y K GL
Sbjct: 131 MLGEGVIPDRVTVTTVLNLPGC-----TVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGL 185
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L++A+ VF +++++++ +++ + G H L++F R++G+ + F+ +S+L
Sbjct: 186 LAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTV 245
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
A + +L +G Q+H+LV + + FV L++ Y+KC+ LD R+F + D ++
Sbjct: 246 AAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSY 305
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ +I YA A + LF +M G + ++ +L + + G+Q+H+ ++
Sbjct: 306 NVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVL 365
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
+G +S + N ++D YSKC +L+ + F E +SW ALI G++ + + EA++L
Sbjct: 366 LGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQL 425
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
DM G P+ T+S+I+ SS + I G+Q H +++ G+ S+V GS LVDMYAK
Sbjct: 426 FSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAK 485
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG L++A + FD + +N +SWN ++ YA +G + A++++ M P+ TF+ V
Sbjct: 486 CGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSV 545
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L+AC H GL +E YF+ M + ISP +H A V+ G + + + P +
Sbjct: 546 LAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKA 605
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+ ++W +L C+ H + L R AA+K+ +P D + +++LSN+YA A W++ A V+K
Sbjct: 606 DPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKK 665
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
IM+++ ++K++G SW E++ K++ F+++ ++ + +++L + GY PD
Sbjct: 666 IMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPD 722
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 211/390 (54%), Gaps = 10/390 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G +V N LL Y K + A+++F EM +++ ++++A++ G S+ G+ AL
Sbjct: 162 IKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQAL 221
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + ++T+ ++ A G ++H + RS LN V+N L++ Y
Sbjct: 222 QLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFY 281
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYC--QCGEHVHGLKIFLLSRKSGVAISEFS 179
KC L + +FD ER+++S+ ++++Y QC V L++F +K G
Sbjct: 282 SKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATV--LRLFREMQKLGFDRQVLP 339
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
A++L L ++ +G QIH+ + L + + LI++Y+KC LD A FSN
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+W+ALI GY Q G+ EA+ LF M +GL P TFS ++ A + + GRQ
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LHS +I+ G+ S F + ++D Y+KC L+E+L+TFDEM E + +SWNA+I+ A H
Sbjct: 460 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVIS---AYAH 516
Query: 360 YGE---AIELLKDMLFEGHCPNLYTYSNIL 386
YGE AI++ + ML G P+ T+ ++L
Sbjct: 517 YGEAKNAIKMFEGMLHCGFNPDSVTFLSVL 546
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG+ +V + + L+ MY K +++A + FDEMPERN ISW+A+IS ++ G + A
Sbjct: 464 LIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNA 523
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDA-RSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ F M+ C P+ T++ ++AC+ G A K H ++ + C+I+
Sbjct: 524 IKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVID 583
Query: 120 MYGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
G+ G S Q + + + + I W S+L S
Sbjct: 584 TLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 616
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 215/672 (31%), Positives = 352/672 (52%), Gaps = 4/672 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG +V N L+ M+ R+ DA++LFD M ER+ ISW+A+IS +S +
Sbjct: 171 VVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKC 230
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
M ++P+ T VS CAS G IH SGL + + N L+NM
Sbjct: 231 FIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNM 290
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEF 178
Y G L A+ +F R+ ISW +++SSY Q V L+ LL G S
Sbjct: 291 YSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNS-M 349
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +S LGAC+ L G IH+++ + +L+ + L+ +Y+KC ++ RVF ++
Sbjct: 350 TFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESM 409
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-G 297
D+ + + L GGYA L A+ +F M +G+ P+ +T + G + + G
Sbjct: 410 PCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYG 469
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
LH+ + + G S ++ N+++ Y+ C LE S F ++ V+SWNA+IA ++
Sbjct: 470 MPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRH 529
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EAI+L D G+ + + + L+ S+++ ++E G Q H VK G D + +
Sbjct: 530 GRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVV 589
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+A +DMY KCG+++ K + + WNT++ GYA++G +EA + + M K
Sbjct: 590 NATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQK 649
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ TF+ +LSAC H GL+++G Y+NSM G+SP + H +V L G+ A +
Sbjct: 650 PDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEK 709
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FI P+ PN ++WR LLS +THK+L +GR AA+ +L DP D SA+++LSN+YA
Sbjct: 710 FIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNAR 769
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
W + K+R MK L K CSW +L+N++ F + ++ ++++ + L +
Sbjct: 770 WVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLRE 829
Query: 658 GGYVPDPIYSSH 669
GYV D + H
Sbjct: 830 VGYVADTSSALH 841
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 220/464 (47%), Gaps = 6/464 (1%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRG---DA 92
MP R SW +SG ++ G+ A R+M + + + V+AC RG A
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
G IH +R+GL N ++ L+++YG GL+ +AQ +F +RN +SW +++ +
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
G L + RK GV + + A+V+ C L + G+Q+ + V L
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
VA LI ++ ++ A R+F ++ D +W+A+I Y+ + + M
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
+ P T ++ A G +HSL + G + N +++ YS L+E+
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEA 300
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF--EGHCPNLYTYSNILNISS 390
F M DV+SWN +I+ ++ S EA+E L +L EG PN T+S+ L S
Sbjct: 301 ESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGP-PNSMTFSSALGACS 359
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
A+ G+ H I++ + ++IG++L+ MY+KC + D +VF+ + ++VS N
Sbjct: 360 SPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNV 419
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+ GYA A+ ++S M+ IKPN T I + C +G
Sbjct: 420 LTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG 463
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/406 (19%), Positives = 168/406 (41%), Gaps = 44/406 (10%)
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG---GRQL 300
++W + G A+ G A L M + S + ++ A G G +
Sbjct: 7 SSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAI 66
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+L + G ++ +L Y L+ + + F EM + +VVSW A++ ++
Sbjct: 67 HALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCM 126
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ + M EG N + ++++ + G Q +V G ++V + ++L
Sbjct: 127 EEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSL 186
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ M+ R+ DA ++FD + ++ +SWN M+ Y+ + + + S M+ ++KP+
Sbjct: 187 ITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDV 246
Query: 481 NTFIGVLSAC-----------VHIGLVEEGWH----YFNSMIRDHGISPRMDH------- 518
T ++S C +H V G H N+++ + + ++D
Sbjct: 247 TTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRN 306
Query: 519 ------------IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVL 566
I+S V +C + +++ PN + + L C + + L+
Sbjct: 307 MSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMN 366
Query: 567 GRYAAEKILSTDPEDTSAHIMLSN----VYAEANMWDETAKVRKIM 608
GR IL ++ +++ N +Y++ N ++T +V + M
Sbjct: 367 GRTIHAMILQRSLQNV---LLIGNSLLTMYSKCNSMEDTERVFESM 409
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 198/629 (31%), Positives = 351/629 (55%), Gaps = 6/629 (0%)
Query: 26 INDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSA 85
+ DA +LFDEM + + W+ +I GF+ G+ A+ ++ MV ++ + +TY + +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
A GK+IH + + G + +V N LI++Y K G A+ VF+ ER+ +SW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
S++S Y G+ L +F K G FS S LGAC+ + + K+G +IH +
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 206 CALEF-DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
+E D V ++++Y+K ++ A R+F+ + ++ AW+ +IG YA+ G+ +A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 265 LFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
F KM +GL P +T +L A A + GR +H ++ GF + ++D Y
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+C L+ + FD M E +V+SWN++IA ++ + A+EL +++ P+ T +
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+IL ++ ++ G++ H IVK + SN +I ++LV MYA CG L DARK F+H+ K
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
++VSWN++++ YA HG GR ++ ++S M +++ PN +TF +L+AC G+V+EGW YF
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
SM R++GI P ++H ++ L G A F++ P P +W LL+ + HKD
Sbjct: 556 ESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKD 615
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
+ + +AAE+I + ++T +++L N+YAEA W++ +++ +M+ K + + + S E
Sbjct: 616 ITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVE 675
Query: 624 LQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
+ K H F+ + ++EV++ +S
Sbjct: 676 AKGKSHVFTNGDRSHVATNKIYEVLDVVS 704
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 234/443 (52%), Gaps = 7/443 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +V N L+ +Y+K DA+K+F+EMPER+++SW+++ISG+ +G +
Sbjct: 156 VIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSS 215
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL-NSHVSNCLIN 119
L F+ M+ C +P+ ++ + A+ AC+ + GKEIH RS +E + V +++
Sbjct: 216 LMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILD 275
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEF 178
MY K G +S A+ +F+ ++RN ++W ++ Y + G F +S ++G+
Sbjct: 276 MYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVI 335
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ ++L A A+L G IH + + LI++Y +C +L A +F +
Sbjct: 336 TSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM 391
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
++ +W+++I Y Q GK A++LF +++ S L+P T + +L A+A+ GR
Sbjct: 392 AEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGR 451
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H+ I+K + S T + N+++ Y+ C LE++ K F+ + DVVSWN++I +
Sbjct: 452 EIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHG 511
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIG 417
++ L +M+ PN T++++L S ++ G + + + G D +
Sbjct: 512 FGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHY 571
Query: 418 SALVDMYAKCGRLNDARKVFDHL 440
++D+ + G + A++ + +
Sbjct: 572 GCMLDLIGRTGNFSAAKRFLEEM 594
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 218/448 (48%), Gaps = 7/448 (1%)
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
G ++ + + Y+ ++N + + L+ A +FD + ++ W ++
Sbjct: 43 GISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMI 102
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ CG ++ ++ + +GV F+ V+ + A + +L+ G +IH++V K
Sbjct: 103 KGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFV 162
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
D +V LI+LY K A +VF + D+ +W+++I GY LG ++ LF +M
Sbjct: 163 SDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEM 222
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF-TFVANTVLDFYSKCEL 328
G P + LGA + V G+++H ++ + V ++LD YSK
Sbjct: 223 LKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGE 282
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE-GHCPNLYTYSNILN 387
+ + + F+ M + ++V+WN +I + + +A + M + G P++ T N+L
Sbjct: 283 VSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLP 342
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
S AI G+ H ++ GF ++V+ +AL+DMY +CG+L A +FD ++ KN++S
Sbjct: 343 AS----AILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVIS 398
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
WN+++ Y Q+G ALE++ + ++ + P+ T +L A + EG ++
Sbjct: 399 WNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIV 458
Query: 508 RDHGISPRMDHIASVVHLFACRGQTRRA 535
+ S + + S+VH++A G A
Sbjct: 459 KSRYWSNTII-LNSLVHMYAMCGDLEDA 485
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 182/338 (53%), Gaps = 8/338 (2%)
Query: 222 YAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTF 281
+A ++ A ++F + D W+ +I G+ G EA+ + +M +G+ T+
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 282 SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
+V+ + A + G+++H+++IK+GF S +V N+++ Y K ++ K F+EM E
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 342 HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
D+VSWN++I+G+LA ++ L K+ML G P+ ++ + L S + + + GK+
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 402 HCCIVKPGFDS-NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
HC V+ ++ +V++ ++++DMY+K G ++ A ++F+ + +N+V+WN M+ YA++G
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 461 GREALEIYSMMQE-NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
+A + M E N ++P+ T I +L A + EG +R G P M
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMR-RGFLPHMVLE 368
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+++ ++ GQ + A E I E N + W +++
Sbjct: 369 TALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAA 405
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 130/241 (53%), Gaps = 12/241 (4%)
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
++ L+E++L+ FDEM++ D WN +I G + Y EA++ M+F G + +TY
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
++ + I ++E GK+ H ++K GF S+V + ++L+ +Y K G DA KVF+ +
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
+++VSWN+M+ GY G G +L ++ M + KP+ + + L AC H+ + G
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG--- 250
Query: 503 FNSMIRDHGISPRMDH-----IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
I H + R++ + S++ +++ G+ A E I + I+ N V W ++ G
Sbjct: 251 --KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA-ERIFNGMIQRNIVAWNVMI-G 306
Query: 558 C 558
C
Sbjct: 307 C 307
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 197/640 (30%), Positives = 344/640 (53%), Gaps = 4/640 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G ++ L+ +Y F R++ A+ +FD +P + +SW +I +
Sbjct: 28 LVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDI 87
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ ++ M C+ E + + + AC+ + G+++H ++ + G +S V L++M
Sbjct: 88 VGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDM 146
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + ++ VFD +L+RN SW S+++ Y Q GL +F R+ + ++ +
Sbjct: 147 YAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITL 206
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++ AC LG L G +H + KC +E ++ L++LYAKC + A VF +
Sbjct: 207 GILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHG 266
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+A+I GY Q G EA+ LF++ ++P++VT + V + + + GR +
Sbjct: 267 IDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSI 326
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L IK+G S V N+++DFY+KC++ ++ F+ + + DVV+WN++I+ +
Sbjct: 327 HGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSA 385
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF-DSNVVIGSA 419
EA+EL M P+ T ++L+ + + A++ G H VK G SNV +G+A
Sbjct: 386 YEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTA 445
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+ YAKCG AR +FD + K+ V+W+ M+ GY G GR +L I+ M + ++KPN
Sbjct: 446 LLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPN 505
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ F +LSAC H G++ EGW F + +D+ + P H +V L A G+ + A +FI
Sbjct: 506 EEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFI 565
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ P++P+ ++ L GC H LG A +++L P D ++++ N+YA W
Sbjct: 566 QKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMCNLYASDARWS 625
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQF 639
+ +VR++MK++ L K GCS E+ H FS SR A
Sbjct: 626 KVKQVRELMKQRGLMKTPGCSLMEMDVD-HDFSFSRAASL 664
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 226/461 (49%), Gaps = 3/461 (0%)
Query: 97 EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
E+H + GL + S L+++YG G L A+ VFD + +SW ++ Y
Sbjct: 23 EMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNS 82
Query: 157 EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
E + + R + VL AC+ N G ++H + K D FV
Sbjct: 83 EFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFT 141
Query: 217 GLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
GL+++YAKC +++ + VF ++ +WS++I GY Q A + + LF +M +
Sbjct: 142 GLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEA 201
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
+++T ++ A + G+ LH +IK G +++ +LD Y+KC ++ ++ F
Sbjct: 202 NQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVF 261
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
DE+ D+VSW A+I G+ + EA++L PN T +++ + S + +
Sbjct: 262 DELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLN 321
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G+ H +K G + ++ ++LVD YAKC DAR VF+ +S +++V+WN+++ ++
Sbjct: 322 LGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFS 380
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
Q+G EALE++ M+ + P+ T + VLSAC + ++ G F++ G+
Sbjct: 381 QNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVG-SSFHAYAVKRGLLSSN 439
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++ + + F + + I + + V W ++SG
Sbjct: 440 VYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISG 480
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 187/371 (50%), Gaps = 14/371 (3%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
N+ M++H+ + L D + L++LY +LDLA VF I PD +W +I
Sbjct: 17 NINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIR 76
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
Y + + + + +M V FS+VL A ++ + GR++H I+K G +
Sbjct: 77 WYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NP 135
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
+FV ++D Y+KC +E S FDE + +V SW+++IAG++ + + + L M
Sbjct: 136 DSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMR 195
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
E N T +++ + A+ GK H ++K G + + +AL+D+YAKCG +
Sbjct: 196 EELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVR 255
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
DAR VFD L ++VSW M+VGY Q+G EAL+++ ++ + PND T V S+C
Sbjct: 256 DARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCS 315
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRM---DHIA--SVVHLFACRGQTRRAYEFIKSSPIEP 546
+ + G HG+S ++ D I S+V +A + Q R ++ + +
Sbjct: 316 QLLNLNLGRSI-------HGLSIKLGSRDPIVTNSLVDFYA-KCQMNRDARYVFETISDR 367
Query: 547 NKVVWRCLLSG 557
+ V W ++S
Sbjct: 368 DVVAWNSIISA 378
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 191/657 (29%), Positives = 356/657 (54%), Gaps = 5/657 (0%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H N+ + N +L Y + AQ LF P RN +W+ ++ + G AL+ FR
Sbjct: 71 HKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRA 130
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ + P+ T ++ + +H + GL+ + V N L++ Y K GL
Sbjct: 131 MLGEGVIPDRVTVTTVLNLPGC-----TVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGL 185
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L++A+ VF +++++++ +++ + G H L++F R++G+ + F+ +S+L
Sbjct: 186 LAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTV 245
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
A + +L +G Q+H+LV + + FV L++ Y+KC+ LD R+F + D ++
Sbjct: 246 AAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSY 305
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ +I YA A + LF +M G + ++ +L + + G+Q+H+ ++
Sbjct: 306 NVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVL 365
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
+G +S + N ++D YSKC +L+ + F E +SW ALI G++ + + EA++L
Sbjct: 366 LGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQL 425
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
DM G P+ T+S+I+ SS + I G+Q H +++ G+ S+V GS LVDMYAK
Sbjct: 426 FSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAK 485
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG L++A + FD + +N +SWN ++ YA +G + A++++ M P+ TF+ V
Sbjct: 486 CGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSV 545
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L+AC H GL +E YF+ M + ISP +H A V+ G + + + P +
Sbjct: 546 LAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKA 605
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+ ++W +L C+ H + L R AA+K+ +P D + +++LSN+YA A W++ A V+K
Sbjct: 606 DPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKK 665
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
IM+++ ++K++G SW E++ K++ F+++ ++ + +++L + GY PD
Sbjct: 666 IMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPD 722
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 212/392 (54%), Gaps = 14/392 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G +V N LL Y K + A+++F EM +++ ++++A++ G S+ G+ AL
Sbjct: 162 IKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQAL 221
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + ++T+ ++ A G ++H + RS LN V+N L++ Y
Sbjct: 222 QLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFY 281
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYC--QCGEHVHGLKIFLLSRKSGVAISEFS 179
KC L + +FD ER+++S+ ++++Y QC V L++F +K G
Sbjct: 282 SKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATV--LRLFREMQKLGFDRQVLP 339
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
A++L L ++ +G QIH+ + L + + LI++Y+KC LD A FSN
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+W+ALI GY Q G+ EA+ LF M +GL P TFS ++ A + + GRQ
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LHS +I+ G+ S F + ++D Y+KC L+E+L+TFDEM E + +SWNA+I+ + H
Sbjct: 460 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAY---AH 516
Query: 360 YGEAIELLKDMLFEG--HC---PNLYTYSNIL 386
YGEA +K +FEG HC P+ T+ ++L
Sbjct: 517 YGEAKNAIK--MFEGMLHCGFNPDSVTFLSVL 546
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG+ +V + + L+ MY K +++A + FDEMPERN ISW+A+IS ++ G + A
Sbjct: 464 LIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNA 523
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARS-GKEIHGRMYRSGLELNSHVSNCLIN 119
+ F M+ C P+ T++ ++AC+ G A K H ++ + C+I+
Sbjct: 524 IKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVID 583
Query: 120 MYGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
G+ G S Q + + + + I W S+L S
Sbjct: 584 TLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 616
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 198/660 (30%), Positives = 353/660 (53%), Gaps = 1/660 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N + HL+ MY + + +AQ++F+ + ++V +W+ +I + Q G + AL F
Sbjct: 35 GFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMF 94
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M + P TYV ++ACAS + G EIHG++ + G E + V LINMY KC
Sbjct: 95 YQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKC 154
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A F R+ +SW +++++ Q + ++ + GV ++ + +V
Sbjct: 155 GSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVF 214
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A L G I+SLV +E D V +N++ L A R+F ++ D+
Sbjct: 215 NAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVV 274
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+ +I Y Q EA+ LF ++ G+ +++TF +L + + G+ +H L+
Sbjct: 275 TWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELV 334
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+ G+ VA ++ Y +CE ++ K F +M DV++W + + + EA+
Sbjct: 335 KEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEAL 394
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L ++M EG P T +L+ + + A++ G+Q H I++ GF +V+ +AL++MY
Sbjct: 395 QLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMY 454
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG++ +AR VF+ ++ ++++ WN+ML YAQHG E L++++ MQ + K + +F+
Sbjct: 455 GKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFV 514
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI-KSSP 543
VLSA H G V +G+ YF +M++D I+P + VV L G+ + A + + K S
Sbjct: 515 SVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSG 574
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
P+ ++W LL C+TH + AAE++L DP + A+++LSNVYA A WD +
Sbjct: 575 CLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNR 634
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+RK+M+ + +KK+ G S E+ N++H F + + ++ ++ L+ + GY+PD
Sbjct: 635 MRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPD 694
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 256/493 (51%), Gaps = 8/493 (1%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+P+ +V + C+S + G+ +H + G E N+ V LI MY +CG + AQ
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VF+ ++ +W ++ YCQ G++ L +F ++ V ++ + ++L ACA
Sbjct: 61 QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+LK GM+IH + + E D FV LIN+Y KC + A F ++ D+ +W+A+I
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
Q + A L+ +M G++P+++T V A+ D G+ ++SL+ S
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMES 240
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V N+ ++ + LL ++ + F++M + DVV+WN +I ++ + ++GEA+ L +
Sbjct: 241 DVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQ 300
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
+G N T+ +LN+ + + ++ GK H + + G+D +VV+ +AL+ +Y +C
Sbjct: 301 QDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPG 360
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
A K+F + SK++++W M V YAQ+G +EAL+++ MQ +P T + VL C
Sbjct: 361 QAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCA 420
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNK 548
H+ +++G +S I ++G M ++++++ G + R +E + I
Sbjct: 421 HLAALQKG-RQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDI---- 475
Query: 549 VVWRCLLSGCKTH 561
+VW +L H
Sbjct: 476 LVWNSMLGAYAQH 488
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 216/455 (47%), Gaps = 3/455 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF +V L+ MY K + A F + R+V+SW+A+I+ Q +A
Sbjct: 132 ILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALA 191
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+R M + PN T +A GK I+ + +E + V N +NM
Sbjct: 192 RWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNM 251
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+G GLL A+ +F+ ++R+ ++W +++ Y Q +++F ++ G+ ++ +
Sbjct: 252 FGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITF 311
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+L L +L G IH LV + + D VA L++LY +CE A ++F ++
Sbjct: 312 VLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGS 371
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+ + YAQ G EA+ LF +M G P+ T VL A + GRQ+
Sbjct: 372 KDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQI 431
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS II+ GF V +++ Y KC + E+ F++M + D++ WN+++ + +Y
Sbjct: 432 HSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYY 491
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
E ++L M +G + ++ ++L+ S ++ G Q +++ +
Sbjct: 492 DETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGC 551
Query: 420 LVDMYAKCGRLNDARKVFDHLSS--KNLVSWNTML 452
+VD+ + GR+ +A + LS + + W T+L
Sbjct: 552 VVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLL 586
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 200/669 (29%), Positives = 357/669 (53%), Gaps = 13/669 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G ++ L+ +Y ++ ++ FD++P+++V +W+++IS + G A
Sbjct: 142 LVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEA 201
Query: 61 LN-YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ +++L++ + P++YT+ + AC + D G+ IH ++ G + N V+ LI+
Sbjct: 202 IGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIH 258
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY + G A+ +FD R+ SW +++S Q G L + R G+ ++ +
Sbjct: 259 MYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVT 318
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L C LG++ M IH V K LEFD FV+ LIN+YAK L+ A + F +
Sbjct: 319 VVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMF 378
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ D+ +W+++I Y Q A FVKM +G P +T + A ++ R
Sbjct: 379 ITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRS 438
Query: 300 LHSLIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H I++ G+ + N V+D Y+K LL+ + K F+ + DV+SWN LI G+ +
Sbjct: 439 VHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNG 498
Query: 359 HYGEAIELLKDMLFEGHC----PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
EAIE+ K M C PN T+ +IL + + A++ G + H ++K +V
Sbjct: 499 LASEAIEVYKMM---EECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDV 555
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ + L+D+Y KCGRL DA +F + ++ V+WN ++ + HG + L+++ M +
Sbjct: 556 FVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDE 615
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
+KP+ TF+ +LSAC H G VEEG F +++++GI P + H +V L G
Sbjct: 616 GVKPDHVTFVSLLSACSHSGFVEEGKWCFR-LMQEYGIKPSLKHYGCMVDLLGRAGYLEM 674
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
AY FIK P++P+ +W LL C+ H ++ LG++A++++ D ++ +++LSN+YA
Sbjct: 675 AYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYAN 734
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
W+ KVR + +E+ LKK G S E+ K+ F T + + +++E + L+
Sbjct: 735 VGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAK 794
Query: 655 LFDGGYVPD 663
+ GY+PD
Sbjct: 795 MKSLGYIPD 803
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 152/535 (28%), Positives = 268/535 (50%), Gaps = 18/535 (3%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
K +H + +G + +S L+N+Y G +S ++ FD +++ +W S++S+Y
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 155 CGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
G + F L S + ++ VL AC G L G +IH FK +++ F
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVF 251
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
VA LI++Y++ +A +F ++ D+ +W+A+I G Q G A +A+D+ +M G
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ + VT +L + + +H +IK G FV+N +++ Y+K LE++
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
K F +M DVVSWN++IA + + A M G P+L T ++ +I +
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431
Query: 394 AIEWGKQTHCCIVKPGF-DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+ + H I++ G+ +VVIG+A+VDMYAK G L+ A KVF+ + K+++SWNT++
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLI 491
Query: 453 VGYAQHGLGREALEIYSMMQENK-IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
GYAQ+GL EA+E+Y MM+E K I PN T++ +L A H+G +++G +I+
Sbjct: 492 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIK--- 548
Query: 512 ISPRMDHIAS--VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS--GCKTHKDLVLG 567
+ +D + ++ ++ G+ A P E + V W ++S G H + L
Sbjct: 549 TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCHGIHGHAEKTLK 607
Query: 568 RYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK---KDTGC 619
+ P D + L + + + +E ++M+E +K K GC
Sbjct: 608 LFGEMLDEGVKP-DHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC 661
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 145/289 (50%), Gaps = 9/289 (3%)
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
E+ F+++ F +T + LH+L++ G F++ +++ Y+ + S TFD
Sbjct: 119 EIDFNFL---FDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFD 175
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIE 396
++ + DV +WN++I+ ++ + H+ EAI +L P+ YT+ +L +
Sbjct: 176 QIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD-- 233
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G++ HC K GF NV + ++L+ MY++ G AR +FD + +++ SWN M+ G
Sbjct: 234 -GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLI 292
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
Q+G +AL++ M+ IK N T + +L C +G + +I+ HG+ +
Sbjct: 293 QNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIK-HGLEFDL 351
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
++++++A G A + + I + V W +++ + + D V
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFIT-DVVSWNSIIAAYEQNDDPV 399
>gi|50428671|gb|AAT77022.1| putative PPR repeat protein [Oryza sativa Japonica Group]
gi|108712010|gb|ABF99805.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 725
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 198/638 (31%), Positives = 341/638 (53%), Gaps = 7/638 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ + + P + N+LL +Y + + A+ LFD MP R+ +SW+ LI+G+S +G +A
Sbjct: 1 MLRAAYRPGLFLRNNLLALYCRCGDMRHARLLFDGMPRRDAVSWNTLIAGYSGLGSCRLA 60
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR + +T+ A+++CA GD R G+ +HG SGL + ++N +I+M
Sbjct: 61 LDAFRDARASGDGVDRFTFAAALASCARVGDWRDGRVVHGLAVVSGLARTAFLTNSVIDM 120
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG++ + +FD + ER SW LLS+Y + G + + + +SGV + F+
Sbjct: 121 YAKCGMIDEVRLLFDRAEERGEASWNLLLSAYVRMGWPEVAVNVLVWMHRSGVKLDSFAL 180
Query: 181 ASVLGACAVLGNLK-VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+L AC+ LG+ + V +HS V K L+ D FV ++++YAK L+ A +VF I
Sbjct: 181 GGILKACSELGDSEDVRRMLHSCVVKVGLDLDVFVGSAMVDMYAKNGGLEEAIKVFDCIP 240
Query: 240 LPDLTAWSALIGGYAQLGK------ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
++ ++A+I G+A+LG EA+ LF M + PS+ TF VL
Sbjct: 241 NQNVVVYNAMIAGFARLGNDPCPEIRIEAVTLFSNMLKKRIKPSKFTFKSVLEVCNLTNA 300
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
GRQ+H+ +I G F+A+ +++ YSK + +SL+ FD + DV W ++I
Sbjct: 301 VRCGRQIHAHVILSGLQGDEFIASVLINLYSKARCVNDSLRCFDMTVKEDVFIWTSMITA 360
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ + H+ +A+ L +++L+ + +T S++++ + + KQ HC VK G D
Sbjct: 361 FVQNEHFEKALYLFRELLYTRKGTDQFTISSVMSACAALSVPTTCKQIHCHAVKTGLDQF 420
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V G++ + MY G L +++ F+ +S + SW+ M++ YA HG +ALE++ M+
Sbjct: 421 TVSGNSQIAMYRNIGDLKASKQTFEQISCLDTFSWSAMILSYAVHGYESKALELFEKMKN 480
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+ N++ + L AC H GL +EG Y+ + I D G S + A +V L G+
Sbjct: 481 LGVMMNESASLAALIACSHQGLGDEGLRYYENTIPDDGFSLDVKLKACMVDLLGRVGKIA 540
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A +FI SS E + ++W LL C+ H D EK++ +P S+++ML N+Y
Sbjct: 541 DAEDFIMSSGSENDPILWHALLRACRVHGDKERCTKIGEKLMELEPFSASSYVMLYNLYM 600
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+A + R +M+E+ + + G SWT+ +H F
Sbjct: 601 DAGKISLAMRTRGLMRERGISNEAGISWTDFGGSIHNF 638
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 225/659 (34%), Positives = 352/659 (53%), Gaps = 46/659 (6%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVC 69
+I+ N + Y K S+++ A++LFD+MP+R V+SW+ +IS +S+ G AL M
Sbjct: 32 IISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHR 91
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
++ + T+ +S CA R GK IH + +SG E V + L+ Y C +
Sbjct: 92 SHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGE 151
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF------------------------ 165
A+ VFD + RN + W +L Y C L +F
Sbjct: 152 ARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDG 211
Query: 166 ---------LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
L+ R +EF+ V+ AC LG L VG +H L+ KC LE+D +
Sbjct: 212 CGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGG 271
Query: 217 GLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
L+ Y +CE +D A RV + P L A ++LI G +G+ +A +F M + + P
Sbjct: 272 ALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGM--TEMNP 329
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHS--LIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
V+++ ++ +A +GG+ S L KM + F +NT++ YS+ ++++L+
Sbjct: 330 --VSYNLMIKGYA-----VGGQMDDSKRLFEKMPCRTI-FSSNTMISVYSRNGEIDKALE 381
Query: 335 TFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
F+E +E D V+WN++I+G++ S EA++L M T+S + + S +
Sbjct: 382 LFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLG 441
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
++ G+ H ++K F+SNV +G++L+DMY+KCG + +A+ F + S N+ +W ++
Sbjct: 442 SLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALIN 501
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
G+A HGLG EA+ ++ M E + PN TF+GVLSAC GLV EG F+SM R + ++
Sbjct: 502 GHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVT 561
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEK 573
P ++H A VV L G R A EFIK P+E + VVW LLS C DL +G AEK
Sbjct: 562 PTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEK 621
Query: 574 ILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
+ S DP+ S++++LSN+YA W E VRKI++ +KKD GCSW EL NK+H FS
Sbjct: 622 MFSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELNNKIHVFS 680
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 208/484 (42%), Gaps = 83/484 (17%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP-EVALNYFRLM 67
N + ++ +L+ YV + ++DA +F +MP R+V++W+ LISGFS+ G AL FRLM
Sbjct: 163 NEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRLM 222
Query: 68 V-CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC-- 124
+ PN +T+ V AC G G+ +HG + + GLE + + L+ Y +C
Sbjct: 223 MRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEA 282
Query: 125 -----------------------------GLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
G + A+ VF+ E N +S+ ++ Y
Sbjct: 283 IDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVG 342
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G+ ++F + C ++ F +
Sbjct: 343 GQMDDSKRLF----------EKMPCRTI-----------------------------FSS 363
Query: 216 MGLINLYAKCEKLDLASRVFSNIQ-LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
+I++Y++ ++D A +F + D W+++I GY G+ EA+ L++ M +
Sbjct: 364 NTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSI 423
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
++ TFS + A + + G+ LH+ +IK F S +V +++D YSKC + E+
Sbjct: 424 QQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQT 483
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
+F + +V +W ALI GH EAI L M+ +G PN T+ +L+ S
Sbjct: 484 SFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGL 543
Query: 395 IEWGKQT-----HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSW 448
+ G + C V P + + VD+ + G + +A + + + V W
Sbjct: 544 VNEGMKIFHSMERCYSVTPTLEHYACV----VDLLGRSGHIREAEEFIKKMPLEADGVVW 599
Query: 449 NTML 452
+L
Sbjct: 600 GALL 603
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + F NV L+ MY K I +AQ F + NV +W+ALI+G + G+ A
Sbjct: 453 LIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEA 512
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR--SGLELNSHVSNCLI 118
++ F M+ L PN T+VG +SAC+ G G +I M R S H + C++
Sbjct: 513 ISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYA-CVV 571
Query: 119 NMYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
++ G+ G + A +F+ LE + + W +LLS+
Sbjct: 572 DLLGRSGHIREAEEFIKKMPLEADGVVWGALLSA 605
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 79/150 (52%), Gaps = 10/150 (6%)
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
S ++ + + YAK +L+ AR++FD + + +VSWNTM+ Y++HG EAL + M
Sbjct: 30 SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 89
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR-- 529
+ +K +++TF VLS C + + +G + ++ G S + + S + F
Sbjct: 90 HRSHMKLSESTFSSVLSVCARLRCLRDG-KLIHCLVLKSG-SESFELVGSALLYFYASCF 147
Query: 530 --GQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G+ RR ++ + + N+V+W +L G
Sbjct: 148 EIGEARRVFDVL----VRRNEVLWSLMLVG 173
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 192/573 (33%), Positives = 313/573 (54%), Gaps = 2/573 (0%)
Query: 93 RSGKEIHGRMYR-SGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
+ G+++H M S LE N++++ L Y CGL+S A+ +FD + +NS W ++
Sbjct: 76 KQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRG 135
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
Y G + L ++ G F+ VL AC L +++G ++HS V C LE D
Sbjct: 136 YASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESD 195
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
+V L+ +YAK + A VF + DLT+W+ +I GYA+ + A +F M
Sbjct: 196 IYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGK 255
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT-FVANTVLDFYSKCELLE 330
+GL T +L A AD+K G+ +H ++ ++ F N++++ Y C +
Sbjct: 256 AGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMV 315
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
++ + F+ + D VSWN++I G+ + E++ L + M +G P+ T+ +L
Sbjct: 316 DARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACD 375
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
I A+ +G H +VK GFD+N ++G+ALVDMY+KCG L +R+VFD + K+LVSW+
Sbjct: 376 QIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSA 435
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
M+ GY HG GREA+ I M+ N + P++ F +LSAC H GLV EG F M +++
Sbjct: 436 MVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEY 495
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYA 570
+ P + H + +V L G AY I++ I+P +W LL+ + HK++ L +
Sbjct: 496 NVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEIS 555
Query: 571 AEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHY 630
A+K+ +P+ S++I LSN+YA WD+ +VR +++ K LKK GCS+ EL N +H
Sbjct: 556 AQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHR 615
Query: 631 FSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
F + Q D++ +N+L L + GY PD
Sbjct: 616 FLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPD 648
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 222/457 (48%), Gaps = 11/457 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N L Y ++ A+ +FD + +N W+ +I G++ G+P +L +R M+
Sbjct: 94 NTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREML 153
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
C + +TY + AC G+ +H + GLE + +V N L+ MY K G +
Sbjct: 154 CFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMG 213
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+A+ VFD ER+ SW +++S Y + + +F L K+G+ + +L ACA
Sbjct: 214 TARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACA 273
Query: 189 VLGNLKVGMQIHSLVFKCAL-EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
L +K G IH + ++ ++KF LI +Y C + A R+F ++ D +W+
Sbjct: 274 DLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWN 333
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
++I GYA+ G A E++ LF +M G P +VTF VLGA + G +HS ++K
Sbjct: 334 SMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKK 393
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
GF + T V ++D YSKC L S + FDEM + +VSW+A++AG+ EAI +L
Sbjct: 394 GFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISIL 453
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGSALVD 422
M P+ +++IL+ S + GK+ + VKP S +VD
Sbjct: 454 DGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHY----SCMVD 509
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQH 458
+ + G L++A + + K W +L H
Sbjct: 510 LLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLH 546
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 155/301 (51%), Gaps = 1/301 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G ++ N LL MY KF + A+ +FD M ER++ SW+ +ISG+++ A
Sbjct: 187 VVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTA 246
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLIN 119
F LM L + T +G +SACA + GK IHG R+ + N +N LI
Sbjct: 247 FLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIE 306
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY C + A+ +F+ ++++SW S++ Y + G+ L++F G + +
Sbjct: 307 MYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVT 366
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+VLGAC + L+ GM IHS + K + + V L+++Y+KC L + RVF +
Sbjct: 367 FIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMP 426
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
L +WSA++ GY G+ EAI + M ++ ++P F+ +L A + + G++
Sbjct: 427 DKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKE 486
Query: 300 L 300
+
Sbjct: 487 I 487
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF N I L+ MY K + ++++FDEMP+++++SWSA+++G+ G A
Sbjct: 390 LVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREA 449
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELN-----SHVSN 115
++ M + P+ + +SAC+ G GKEI +M + E N SH S
Sbjct: 450 ISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEK---EYNVKPALSHYS- 505
Query: 116 CLINMYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
C++++ G+ G L A + ++ S W +LL++
Sbjct: 506 CMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTA 542
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 181/535 (33%), Positives = 308/535 (57%), Gaps = 9/535 (1%)
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D + E N ++ +++S + G G + + R GV +F+ + AC + +K
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK 156
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
+IH L+FK LE D F+ L+N Y K ++ A F + + D+ W+A++ GYA
Sbjct: 157 ---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 213
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q+G+ ++ F +M ++PS T + L FA + + GR +H +KMG+ S
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V+N+++D Y KC+ +E++L+ F+ M E D+ SWN++++ H + + LL ML G
Sbjct: 274 VSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAG 333
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD------SNVVIGSALVDMYAKCG 428
P+L T + +L S + A+ G++ H ++ G +V++ +A++DMYAKCG
Sbjct: 334 IQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCG 393
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ DA VF+ +S+K++ SWN M++GY HG G EALE++S M E ++KP++ TF+GVLS
Sbjct: 394 SMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLS 453
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H G V +G ++ M + ++P ++H V+ + GQ AYE + PIE N
Sbjct: 454 ACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANP 513
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
VVWR LL+ C+ HK VL AA+++ +PE +++++SNVY ++E +VR M
Sbjct: 514 VVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTM 573
Query: 609 KEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++++++K GCSW EL+N +H F ++ A + ++ +N L+ L + GYVPD
Sbjct: 574 RQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSLTARLXEHGYVPD 628
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 210/434 (48%), Gaps = 13/434 (2%)
Query: 34 DEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDAR 93
D E NV +++A+ISGF G PE +++ M + P+ +T+ A+ AC D
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACL---DVL 153
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
K+IHG +++ GLEL+ + + L+N Y K GL+ AQ F+ R+ + W ++++ Y
Sbjct: 154 EIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 213
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
Q G+ L+ F V S F+ L AV+G+L G IH K +
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
V+ LI++Y KC+ ++ A +F ++ D+ +W++++ + Q G + L +M +G
Sbjct: 274 VSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAG 333
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS------SFTFVANTVLDFYSKCE 327
+ P VT + VL A + + + GR++H +I G + N V+D Y+KC
Sbjct: 334 IQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCG 393
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
+ ++ F+ M DV SWN +I G+ + EA+E+ M P+ T+ +L+
Sbjct: 394 SMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLS 453
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--SALVDMYAKCGRLNDARKVFDHLS-SKN 444
S + G+ +K +D I + ++DM + G+L++A ++ + N
Sbjct: 454 ACSHAGFVSQGR-NFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEAN 512
Query: 445 LVSWNTMLVGYAQH 458
V W +L H
Sbjct: 513 PVVWRALLAACRLH 526
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 197/397 (49%), Gaps = 22/397 (5%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V + L+ Y+KF + AQ F+E+P R+V+ W+A+++G++QIG E+ L F
Sbjct: 166 GLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETF 225
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R M + P+ +T G +S A GD +G+ IHG + G + VSN LI+MYGKC
Sbjct: 226 RRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKC 285
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ A +F+ E++ SW S++S + QCG+H L++ +G+ + +VL
Sbjct: 286 KCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVL 345
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDK------FVAMGLINLYAKCEKLDLASRVFSNI 238
AC+ L L G +IH + L D + +I++YAKC + A VF +
Sbjct: 346 PACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERM 405
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +W+ +I GY G EA+++F +M L P EVTF VL A + GR
Sbjct: 406 SNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGR 465
Query: 299 QLHSLIIKMGFSSFTFVANT------VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALI 351
+ +++M S VA T V+D + L+E+ + M E + V W AL+
Sbjct: 466 ---NFLVQM--KSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Query: 352 AGHLASCHYGEAIELLKDMLFE---GHCPNLYTYSNI 385
A H A E+ +FE HC + SN+
Sbjct: 521 AACRLHKHAVLA-EVAAQRVFELEPEHCGSYVLMSNV 556
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 202/659 (30%), Positives = 358/659 (54%), Gaps = 1/659 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF ++ N L+ MY + ++ A+++FDEMP R+++SW++LISG+S G E AL +
Sbjct: 136 GFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ + P+ +T + A A+ + G+ +HG +SG+ S V+N L+ MY K
Sbjct: 196 HELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKF 255
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ A+ VFD + R+S+++ +++ Y + +K+FL + SVL
Sbjct: 256 SRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFL-ENLDQFKPDILTVTSVL 314
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC L +L + I++ + + + V LI++YAKC + A VF++++ D
Sbjct: 315 CACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTV 374
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+++I GY Q G EA+ LF M +T+ ++ + + G+ LHS
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNG 434
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK G V+N ++D Y+KC + +SLK F+ M D V+WN +I+ + + +
Sbjct: 435 IKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGL 494
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ M P++ T+ L + + + A GK+ HCC+++ G++S + IG+AL++MY
Sbjct: 495 QVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMY 554
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+KCG L + +VF+ +S +++V+W M+ Y +G G +ALE + M+++ I P+ FI
Sbjct: 555 SKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFI 614
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
++ AC H GLVE+G F M + I P ++H A VV L + + +A EFI++ PI
Sbjct: 615 ALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPI 674
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP+ +W +L C+T D+ + +I+ +P+D I+ SN YA WD+ + +
Sbjct: 675 EPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLI 734
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
RK +++K +KK+ G SW E+ K+H F + + Q +H+ + L + GY+PD
Sbjct: 735 RKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPD 793
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 183/334 (54%), Gaps = 2/334 (0%)
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ S A + A + NL +IH+LV L+ F + LI+ Y+ + VF
Sbjct: 3 TRVSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVF 62
Query: 236 SNIQ-LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
+ ++ W+++I +++ G +A++ + K+ S + P + TF V+ A A + +
Sbjct: 63 RRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G ++ I++MGF S +V N ++D YS+ LL + + FDEM D+VSWN+LI+G+
Sbjct: 123 EMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGY 182
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ +Y EA+E+ ++ P+ +T S++L +++ ++ G+ H +K G +S
Sbjct: 183 SSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVS 242
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
V+ + L+ MY K R DAR+VFD + ++ V++NTM+ GY + + E+++++ + +
Sbjct: 243 VVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMF-LENLD 301
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+ KP+ T VL AC H+ + + +N M+R
Sbjct: 302 QFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLR 335
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 125/226 (55%), Gaps = 1/226 (0%)
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
M + V+ +++ A + R++H+L+I +G F + ++D YS SL
Sbjct: 1 MQTRVSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLS 60
Query: 335 TFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
F + +V WN++I + + +A+E + P+ YT+ +++ + +
Sbjct: 61 VFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
E G + I++ GF+S++ +G+ALVDMY++ G L+ AR+VFD + ++LVSWN+++
Sbjct: 121 DAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLIS 180
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
GY+ HG EALEIY ++ + I P+ T VL A ++ +V++G
Sbjct: 181 GYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQG 226
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 208/646 (32%), Positives = 340/646 (52%), Gaps = 5/646 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ + L+ Y KF A+K+FD M +RNV+ W+ +I +++ G +VA
Sbjct: 74 VIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVA 133
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ + +M ++P+ T +G +S + +H + + G + ++N ++N+
Sbjct: 134 FSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALANSMLNV 190
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + AQ +F+ R+ ISW SL+S Y Q G L++ + + G+ + +
Sbjct: 191 YCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTF 250
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S++ A A+ L VG +H + + LE D + LI +Y KC ++ A R+F +
Sbjct: 251 GSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMH 310
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+A+I G Q A A+ +F +M S +MPS T + VL A A++ G +
Sbjct: 311 KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSV 370
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H I++ N+++ Y+KC LE+S FD M D+VSWNA+++GH + H
Sbjct: 371 HGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHL 430
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A+ L +M P+ T ++L + I A+ GK H + K ++I +AL
Sbjct: 431 CKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTAL 490
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMY+KCG L A+K FD + ++LVSW++++ GY HG G AL +YS I+PN
Sbjct: 491 VDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNH 550
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
++ +LSAC H GLV++G +F+SM +D GI PR++H A +V L + G+ AY F K
Sbjct: 551 VIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYK 610
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+P+ V LL C+T ++ LG A +I+ P + ++ L++ YA WD
Sbjct: 611 RMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDG 670
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST--SRFAQFQGIDL 644
+V MK LKK G S+ EL + F T S QF+ I L
Sbjct: 671 VGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEIML 716
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 267/519 (51%), Gaps = 5/519 (0%)
Query: 43 SWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM 102
S++A+I+ S G L + M+ P+ +T+ V AC S G H R+
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 103 YRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGL 162
G +S+++ LIN Y K G SA+ VFD +RN + W +++ Y + GEH
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 163 KIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
++ + R+ G+ S + +L L +L+ +H+ V + D +A ++N+Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALANSMLNVY 191
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
KC +++ A +F + D+ +W++L+ GYAQLG E + L ++M + G+ P + TF
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
++ A A + G+ +H I++ G + + +++ Y KC + + + F+ M
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
DV+SW A+I+G + + A+ + + ML P+ T +++L +++ + G H
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
I++ ++ ++LV MYAKCG L + VFD +S +++VSWN ++ G+AQ+G
Sbjct: 372 GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLC 431
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
+AL +++ M++ + +P+ T + +L AC IG + +G + ++ + + P + ++
Sbjct: 432 KALLLFNEMRKARQRPDSITVVSLLQACASIGALHQG-KWIHNFVTKSCLGPCILIDTAL 490
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
V +++ G A + P + + V W +++G +H
Sbjct: 491 VDMYSKCGDLGSAQKCFDRMP-QQDLVSWSSIIAGYGSH 528
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 142/258 (55%), Gaps = 3/258 (1%)
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
SR + P +++A+I + G C+ + + M S+ P TF ++ A +
Sbjct: 2 SRAKPSFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSL 61
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
G H +I G+SS +++A ++++FYSK + + K FD MD+ +VV W +I
Sbjct: 62 DLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMI 121
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
+ + + A + M +G P+ T +L + S + + + H C+++ GF
Sbjct: 122 GCYTRAGEHDVAFSMYNIMRRQGIQPSSVT---MLGLLSGVLELVHLQCLHACVIQYGFG 178
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
S+V + ++++++Y KCGR+ DA+ +F+ + +++++SWN+++ GYAQ G RE L++ M
Sbjct: 179 SDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRM 238
Query: 472 QENKIKPNDNTFIGVLSA 489
+ + I+P+ TF ++SA
Sbjct: 239 KTDGIEPDQQTFGSLVSA 256
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 135/311 (43%), Gaps = 38/311 (12%)
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
S+NA+I + + + + ML P+ +T+ +++ + + G H +
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
+ G+ S+ I ++L++ Y+K G ARKVFD + +N+V W TM+ Y + G A
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 466 EIYSMMQENKIKPNDNTFIGVLSA--------CVHIGLVEEGW----HYFNSMIRDHGIS 513
+Y++M+ I+P+ T +G+LS C+H +++ G+ NSM+ +
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKC 194
Query: 514 PRMDHIASVVHLFACR---------------GQTRRAYEFI---KSSPIEPNKVVWRCLL 555
R++ ++ L R G R + + K+ IEP++ + L+
Sbjct: 195 GRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLV 254
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK--EKSL 613
S L +G+ IL E S HI S + M+ + V + E +
Sbjct: 255 SAAAMQSKLGVGKMVHGHILRAGLEQDS-HIETSLI----GMYLKCGNVNSAFRIFEGMM 309
Query: 614 KKDTGCSWTEL 624
KD SWT +
Sbjct: 310 HKDV-ISWTAM 319
>gi|326487167|dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 213/650 (32%), Positives = 367/650 (56%), Gaps = 15/650 (2%)
Query: 21 VKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYV 80
+K R+ DA LFD MP +NV++W++ +SG ++ G PE A F MV + N +
Sbjct: 40 MKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACN 99
Query: 81 GAVSACASRGDA--RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
A++ACA+ G R+G+++H R+G ++ V +CL+ +Y +CG +A+ V
Sbjct: 100 AALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARME 159
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
+ +++ SL+S+ C+ GE + GV +E + S+L AC L +G+Q
Sbjct: 160 SPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACC---PLVLGVQ 216
Query: 199 IHSLVFKCALEFDK--FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
IH + K A+ F + + + L++ Y++ + D+A VF N+Q ++ W ++ + +
Sbjct: 217 IHGYMIK-AMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRD 275
Query: 257 GKACEAIDLFVKMFSSGLM-PSEVTFSYVLGAFADVKETIG-GRQLHSLIIKMGFSSFTF 314
G+ +A+ LF +M S G++ P+E FS LGA E+I G QLHSL IK G +S
Sbjct: 276 GRPEDALQLFDEMISEGVVSPNEFAFSIALGAC----ESIALGSQLHSLAIKHGLASHLR 331
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V+N +L Y + L+++ F +++ D+VSW A I+ + + H +AI LL M +G
Sbjct: 332 VSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQG 391
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
PN Y +S++L+ +D+ ++ G+Q HC +K G D G+AL++MY+KCG++ AR
Sbjct: 392 LTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPAR 451
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
FD + +++ SWN+++ G+AQHG L+ +S M N +PN++T +GVL+AC H G
Sbjct: 452 LAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAG 511
Query: 495 LVEEGWHYFNS-MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
LV+EG +F S M +G H A +V + G+ A I+ P EP +VW+
Sbjct: 512 LVDEGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKT 571
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL+ C+ H +L GR AAEK++ +D+++++++S ++A W + VR+ M E +
Sbjct: 572 LLASCRLHGNLETGRLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGV 631
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+K+ G SW E++N++H F + ++ ++ +LS + D Y D
Sbjct: 632 RKEAGRSWVEVRNEVHTFVAQDVSHPDSPSIYRMLWELSDAMRDTAYDED 681
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 228/476 (47%), Gaps = 20/476 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + + L+ +Y + A+ + M +V+++++L+S + G +A
Sbjct: 124 VRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCRSGEFGMAA 183
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
M+ + PN +T ++AC G +IHG M ++ G + + S+ L++
Sbjct: 184 EALGQMMGHGVMPNEHTVTSILAACCP---LVLGVQIHGYMIKAMGFSQSVYTSSTLVDF 240
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG-VAISEFS 179
Y + G A+ VFD +N ++W +++ + + G L++F G V+ +EF+
Sbjct: 241 YSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEGVVSPNEFA 300
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ LGAC ++ +G Q+HSL K L V+ L+++Y + + +F I+
Sbjct: 301 FSIALGACE---SIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIE 357
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PD+ +W+A I Y Q G +AI L +M S GL P++ FS VL + AD+ GRQ
Sbjct: 358 DPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQ 417
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H L +K+G T N +++ YSKC + + FD MD DV SWN+LI GH
Sbjct: 418 FHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGH---AQ 474
Query: 360 YGEAIELLK---DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+GE +LK +M G PN T +L + ++ G + + + +
Sbjct: 475 HGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTP 534
Query: 417 G--SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALE 466
+ +VDM + GR +DA + + + ++ W T+L HG GR A E
Sbjct: 535 PHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLETGRLAAE 590
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
LD K + ++L FD M +VV+W + ++G + A E+ DM+ G N
Sbjct: 36 LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALND 95
Query: 380 Y--TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ + ++ A+ G+Q H V+ GF + +GS LV++YA+CG A V
Sbjct: 96 FACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVL 155
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ S ++V++ +++ + G A E M + + PN++T +L+AC + L
Sbjct: 156 ARMESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLVL-- 213
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
G MI+ G S + +++V ++ G+
Sbjct: 214 -GVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGE 246
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+ VV +D K GR+ DA +FD + KN+V+W + + G ++G A E+++ M
Sbjct: 27 AEVVRDCKRLDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADM 86
Query: 472 QENKIKPND 480
E+ + ND
Sbjct: 87 VESGVALND 95
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 216/718 (30%), Positives = 364/718 (50%), Gaps = 64/718 (8%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
PNVIT+N ++ Y K ++DA++LFD MP R+V SW+ L+SG+ Q L F M
Sbjct: 69 PNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSM 128
Query: 68 -VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
PN +T+ + +C + G ++ G ++ + V L++M+ +CG
Sbjct: 129 HRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGY 188
Query: 127 LSSAQFVF-------------------------------DASLERNSISWVSLLSSYCQC 155
+ A +F + ER+ +SW ++++ Q
Sbjct: 189 VDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQS 248
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G L + + + GV + + S L ACA L +L G Q+H+ V + + D +VA
Sbjct: 249 GRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVA 308
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
LI LYAKC A RVF+++Q + +W+ LIGG Q ++++LF +M + +
Sbjct: 309 SALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMA 368
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
+ + ++ + + GRQLHSL +K G + V+N+++ Y+KC L+ +
Sbjct: 369 IDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFV 428
Query: 336 FDEMDEHDVVSW-------------------------------NALIAGHLASCHYGEAI 364
F M E D+VSW NA++ ++ + +
Sbjct: 429 FSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGL 488
Query: 365 ELLKDMLFEGH-CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
++ ML + P+ TY + +DI A + G Q VK G NV + +A + M
Sbjct: 489 KMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITM 548
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y+KCGR+++A+K+FD L+ K++VSWN M+ GY+QHG+G++A + + M KP+ ++
Sbjct: 549 YSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISY 608
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ VLS C H GLV+EG YF+ M R HGISP ++H + +V L G A + I P
Sbjct: 609 VAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP 668
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
++P VW LLS CK H + L AA+ + D D+ ++++L+ +Y++A D++A+
Sbjct: 669 MKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQ 728
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
VRK+M++K +KK+ G SW E++NK+H F + Q I + +++L + GYV
Sbjct: 729 VRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYV 786
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 232/497 (46%), Gaps = 68/497 (13%)
Query: 82 AVSACASRGDARSGKEIHGRMYRSGL--------------------------------EL 109
A+ +C SRG + +HGR+ GL E
Sbjct: 10 ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEP 69
Query: 110 NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
N N ++N Y K G LS A+ +FD R+ SW +L+S Y Q + GL+ F+
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 170 KSGVAI-SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
+SG ++ + F+ V+ +C LG ++ Q+ L +K D V L++++ +C +
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189
Query: 229 DLASRVFSNIQLP-------------------------------DLTAWSALIGGYAQLG 257
D ASR+FS I+ P D+ +W+ +I +Q G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+ EA+ L V+M G+ T++ L A A + G+QLH+ +I+ +VA+
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
+++ Y+KC +E+ + F+ + + + VSW LI G L + +++EL M E
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ + + +++ + + G+Q H +K G + +V+ ++L+ +YAKCG L +A VF
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVF 429
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+S +++VSW +M+ Y+Q G +A E + M N T+ +L A + G E
Sbjct: 430 SSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTR----NAITWNAMLGAYIQHGAEE 485
Query: 498 EGWHYFNSMIRDHGISP 514
+G +++M+ ++P
Sbjct: 486 DGLKMYSAMLSQKDVTP 502
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 38/285 (13%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG + ++ N L+ +Y K + +A+ +F M ER+++SW+++I+ +SQIG A
Sbjct: 398 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAR 457
Query: 62 NYF-----------RLMVCCVLE---------------------PNYYTYVGAVSACASR 89
+F M+ ++ P++ TYV CA
Sbjct: 458 EFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADI 517
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
G + G +I G ++GL LN V+N I MY KCG +S AQ +FD ++ +SW +++
Sbjct: 518 GANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMI 577
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG---MQIHSLVFKC 206
+ Y Q G K F G S +VL C+ G ++ G + + V
Sbjct: 578 TGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGI 637
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALI 250
+ + F M ++L + L A + + + P W AL+
Sbjct: 638 SPGLEHFSCM--VDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 680
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 10/156 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G NV N + MY K RI++AQKLFD + ++V+SW+A+I+G+SQ GM + A
Sbjct: 531 VKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAA 590
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-----SGLELNSHVSNC 116
F M+ +P+Y +YV +S C+ G + GK M R GLE H S C
Sbjct: 591 KTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLE---HFS-C 646
Query: 117 LINMYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
++++ G+ G L+ A+ + D ++ + W +LLS+
Sbjct: 647 MVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 213/651 (32%), Positives = 355/651 (54%), Gaps = 5/651 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDE--MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
L+ +Y + A+ +FD+ +PE V + A+I+GF + FR+M C +E
Sbjct: 85 LIRVYSDLGFLGHARNVFDQCSLPETAVCN--AMIAGFLRNQQHMEVPRLFRMMGSCDIE 142
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N YT + A+ AC D G EI R G L+ +V + ++N K G L+ AQ V
Sbjct: 143 INSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKV 202
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD E++ + W S++ Y Q G +++FL G+ S + A++L AC G
Sbjct: 203 FDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLK 262
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
KVGM HS V + D FV L+++Y+ A+ VF ++ L +W+A+I GY
Sbjct: 263 KVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGY 322
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q G E+ LF ++ SG T ++ + + GR LHS II+ S
Sbjct: 323 VQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHL 382
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
++ ++D YSKC ++++ F M + +V++W A++ G + + +A++L M E
Sbjct: 383 VLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEE 442
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
N T ++++ + + ++ G+ H ++ G+ + VI SAL+DMYAKCG+++ A
Sbjct: 443 KVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSA 502
Query: 434 RKVFDH-LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
K+F++ K+++ N+M++GY HG GR AL +YS M E ++KPN TF+ +L+AC H
Sbjct: 503 EKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSH 562
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
GLVEEG F+SM RDH + P+ H A +V L + G+ A E +K P +P+ V
Sbjct: 563 SGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLE 622
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LLSGC+THK+ +G A++++S D ++ ++MLSN+YAEA W+ +R +M+ +
Sbjct: 623 ALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQG 682
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+KK G S E+ NK++ F S + D+++++ L + + GY+PD
Sbjct: 683 MKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPD 733
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 238/475 (50%), Gaps = 4/475 (0%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
K IH ++ ++ + S ++ LI +Y G L A+ VFD + ++++ + +
Sbjct: 64 KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
+H+ ++F + + I+ ++C L AC L + +VGM+I + +V
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
++N K L A +VF + D+ W+++IGGY Q G E+I +F++M GL
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
PS VT + +L A G HS ++ +G + FV +++D YS +
Sbjct: 244 PSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALV 303
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
FD M ++SWNA+I+G++ + E+ L + ++ G + T +++ S +
Sbjct: 304 FDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDL 363
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
E G+ H CI++ +S++V+ +A+VDMY+KCG + A VF + KN+++W MLVG
Sbjct: 364 ENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGL 423
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
+Q+G +AL+++ MQE K+ N T + ++ C H+G + +G IR HG +
Sbjct: 424 SQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIR-HGYAFD 482
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYA 570
++++ ++A G+ A + + + ++ ++ G H GRYA
Sbjct: 483 AVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGH---GRYA 534
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 219/445 (49%), Gaps = 10/445 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GFH ++ + ++ VK + DAQK+FD MPE++V+ W+++I G+ Q G+ ++
Sbjct: 172 VRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESI 231
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M+ L P+ T + AC G + G H + G+ + V L++MY
Sbjct: 232 QMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMY 291
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
G SA VFD+ R+ ISW +++S Y Q G +F +SG +
Sbjct: 292 SNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLV 351
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S++ C+ +L+ G +HS + + LE ++ ++++Y+KC + A+ VF +
Sbjct: 352 SLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKK 411
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+A++ G +Q G A +A+ LF +M + + VT ++ A + GR +H
Sbjct: 412 NVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVH 471
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF-DEMDEHDVVSWNALIAGHLASCHY 360
+ I+ G++ + + ++D Y+KC + + K F +E DV+ N++I G+ H
Sbjct: 472 AHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHG 531
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVV 415
A+ + M+ E PN T+ ++L S +E GK + V+P
Sbjct: 532 RYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHY-- 589
Query: 416 IGSALVDMYAKCGRLNDARKVFDHL 440
+ LVD++++ GRL +A ++ +
Sbjct: 590 --ACLVDLHSRAGRLEEADELVKQM 612
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 139/281 (49%), Gaps = 10/281 (3%)
Query: 280 TFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
FS +L F++ I + +H+ IIK S+ +F+A ++ YS L + FD+
Sbjct: 48 VFSSLLHQFSNT--LIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQC 105
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP---NLYTYSNILNISSDIPAIE 396
+ NA+IAG L + + E L + M G C N YT L +D+ E
Sbjct: 106 SLPETAVCNAMIAGFLRNQQHMEVPRLFRMM---GSCDIEINSYTCMFALKACTDLLDDE 162
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G + V+ GF ++ +GS++V+ K G L DA+KVFD + K++V WN+++ GY
Sbjct: 163 VGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYV 222
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
Q GL E+++++ M ++P+ T +L AC GL + G +S + G+ +
Sbjct: 223 QKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGM-CAHSYVLALGMGNDV 281
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ S+V +++ G T A + S + + W ++SG
Sbjct: 282 FVLTSLVDMYSNLGDTGSA-ALVFDSMCSRSLISWNAMISG 321
>gi|222626139|gb|EEE60271.1| hypothetical protein OsJ_13308 [Oryza sativa Japonica Group]
Length = 758
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 198/638 (31%), Positives = 341/638 (53%), Gaps = 7/638 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ + + P + N+LL +Y + + A+ LFD MP R+ +SW+ LI+G+S +G +A
Sbjct: 1 MLRAAYRPGLFLRNNLLALYCRCGDMRHARLLFDGMPRRDAVSWNTLIAGYSGLGSCRLA 60
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR + +T+ A+++CA GD R G+ +HG SGL + ++N +I+M
Sbjct: 61 LDAFRDARASGDGVDRFTFAAALASCARVGDWRDGRVVHGLAVVSGLARTAFLTNSVIDM 120
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG++ + +FD + ER SW LLS+Y + G + + + +SGV + F+
Sbjct: 121 YAKCGMIDEVRLLFDRAEERGEASWNLLLSAYVRMGWPEVAVNVLVWMHRSGVKLDSFAL 180
Query: 181 ASVLGACAVLGNLK-VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+L AC+ LG+ + V +HS V K L+ D FV ++++YAK L+ A +VF I
Sbjct: 181 GGILKACSELGDSEDVRRMLHSCVVKVGLDLDVFVGSAMVDMYAKNGGLEEAIKVFDCIP 240
Query: 240 LPDLTAWSALIGGYAQLGK------ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
++ ++A+I G+A+LG EA+ LF M + PS+ TF VL
Sbjct: 241 NQNVVVYNAMIAGFARLGNDPCPEIRIEAVTLFSNMLKKRIKPSKFTFKSVLEVCNLTNA 300
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
GRQ+H+ +I G F+A+ +++ YSK + +SL+ FD + DV W ++I
Sbjct: 301 VRCGRQIHAHVILSGLQGDEFIASVLINLYSKARCVNDSLRCFDMTVKEDVFIWTSMITA 360
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ + H+ +A+ L +++L+ + +T S++++ + + KQ HC VK G D
Sbjct: 361 FVQNEHFEKALYLFRELLYTRKGTDQFTISSVMSACAALSVPTTCKQIHCHAVKTGLDQF 420
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V G++ + MY G L +++ F+ +S + SW+ M++ YA HG +ALE++ M+
Sbjct: 421 TVSGNSQIAMYRNIGDLKASKQTFEQISCLDTFSWSAMILSYAVHGYESKALELFEKMKN 480
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+ N++ + L AC H GL +EG Y+ + I D G S + A +V L G+
Sbjct: 481 LGVMMNESASLAALIACSHQGLGDEGLRYYENTIPDDGFSLDVKLKACMVDLLGRVGKIA 540
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A +FI SS E + ++W LL C+ H D EK++ +P S+++ML N+Y
Sbjct: 541 DAEDFIMSSGSENDPILWHALLRACRVHGDKERCTKIGEKLMELEPFSASSYVMLYNLYM 600
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+A + R +M+E+ + + G SWT+ +H F
Sbjct: 601 DAGKISLAMRTRGLMRERGISNEAGISWTDFGGSIHNF 638
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 214/666 (32%), Positives = 355/666 (53%), Gaps = 11/666 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I+ NV N ++ Y K + A+ FD + +N SW ++++ ++Q G AL
Sbjct: 50 ISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAAL 109
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
+ ++ M L+PN Y + ACAS GK IH R+ + GL+L+ + N L+ M
Sbjct: 110 DLYKRMD---LQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTM 166
Query: 121 YGKCGLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG L A+ +F+ R S+S W +++++Y Q G ++++ V S +
Sbjct: 167 YAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLY---EDMDVEPSVRT 223
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL AC+ LG L G +IH+L+ E D + L+ +YA+C+ LD A+++F +
Sbjct: 224 FTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLP 283
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +WSA+I +A+ EAI+ + KM G+ P+ TF+ VL A A V + GR
Sbjct: 284 RRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRA 343
Query: 300 LHSLIIKMGFSSFTFVANTVL-DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H I+ G+ T V T L D Y+ L+E+ FD+++ D W LI G+
Sbjct: 344 VHDQILGNGYK-ITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQG 402
Query: 359 HYGEAIELLKDMLFEGHCP-NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
H +EL ++M P YS +++ + + A +Q H I G S+ V+
Sbjct: 403 HRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLA 462
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
++LV+MY++ G L AR+VFD +SS++ ++W T++ GYA+HG AL +Y M+ +
Sbjct: 463 TSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAE 522
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P++ TF+ VL AC H GL E+G F S+ D+ + P + H + ++ L + G+ A E
Sbjct: 523 PSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEE 582
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
I + P+EPN V W LL + HKD+ +AA +I DP D +++++LSNV+A
Sbjct: 583 LINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGN 642
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
A VR M + +KK G SW E+ +++H F+ + + ++ + +LS + +
Sbjct: 643 LAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKE 702
Query: 658 GGYVPD 663
GYVP+
Sbjct: 703 AGYVPE 708
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 157/333 (47%), Gaps = 15/333 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ ++ L+ +Y + +++A+ LFD++ R+ W+ LI G+S+ G
Sbjct: 348 ILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGV 407
Query: 61 LNYFRLMVCCVLEP-NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L +R M P Y +SACAS G ++ H + G+ + ++ L+N
Sbjct: 408 LELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVN 467
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY + G L SA+ VFD R++++W +L++ Y + GEH L ++ G SE +
Sbjct: 468 MYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELT 527
Query: 180 CASVLGACAVLGNLKVGMQIH-SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
VL AC+ G + G Q+ S+ A+ + +I+L ++ +L A + + +
Sbjct: 528 FMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAM 587
Query: 239 QL-PDLTAWSALIGG---YAQLGKACEAIDLFVKM-----FSSGLMPSEVTFSYVLGAFA 289
+ P+ WS+L+G + + +A A K+ S L+ + + L A
Sbjct: 588 PVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMA 647
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
V+ T+ R + K SS+ VA+ + +F
Sbjct: 648 SVRNTMVARG----VKKRRGSSWIEVADQIHEF 676
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 197/607 (32%), Positives = 327/607 (53%), Gaps = 42/607 (6%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
+ A A G G+++ +M + N N ++ K G L A +F + ER+
Sbjct: 62 IDAYAKCGSLEDGRQLFDKMPQR----NVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQ 117
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
+W S++S + Q L F + K G ++E++ AS L AC+ L ++ G+QIHSL
Sbjct: 118 CTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSL 177
Query: 203 VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEA 262
+ K D ++ L+++Y+KC ++ A +VF + ++ +W++LI Y Q G A EA
Sbjct: 178 IAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEA 237
Query: 263 IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG-FSSFTFVANTVLD 321
+ +F M S + P EVT + V+ A A + G+++H+ ++KM + ++N +D
Sbjct: 238 LKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVD 297
Query: 322 FYSKCELLEESLKTFD-------------------------------EMDEHDVVSWNAL 350
Y+KC ++E+ FD +M E +VVSWNAL
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
IAG+ + EA+ L + E CP YT++NIL +D+ + G Q H ++K GF
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGF 417
Query: 411 ------DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREA 464
+ ++ +G++L+DMY KCG + + VF + ++ VSWN M++G+AQ+G G EA
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA 477
Query: 465 LEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVH 524
LE++ M ++ KP+ T IGVLSAC H G VEEG HYF+SM RD G++P DH +V
Sbjct: 478 LELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 525 LFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSA 584
L G A I+ P++P+ V+W LL+ CK H+++ LG+Y AEK+ + ++
Sbjct: 538 LLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGP 597
Query: 585 HIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDL 644
+++LSN+YAE W + VRK+M+++ + K GCSW ++ H F + + +
Sbjct: 598 YVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQI 657
Query: 645 HEVMNQL 651
H +++ L
Sbjct: 658 HSLLDIL 664
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/494 (30%), Positives = 248/494 (50%), Gaps = 48/494 (9%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
NV T+N ++ K +++A LF MPER+ +W++++SGF+Q E AL YF +M
Sbjct: 85 NVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMH 144
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
N YT+ +SAC+ D G +IH + +S + ++ + L++MY KCG ++
Sbjct: 145 KEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVN 204
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
AQ VFD +RN +SW SL++ Y Q G V LK+F + +S V E + ASV+ ACA
Sbjct: 205 DAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACA 264
Query: 189 VLGNLKVGMQIHSLVFKC-ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA-- 245
L +KVG ++H+ V K L D ++ +++YAKC ++ A +F ++ + ++ A
Sbjct: 265 SLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 246 -----------------------------WSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
W+ALI GY Q G+ EA+ LF + + P
Sbjct: 325 SMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCP 384
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF------SSFTFVANTVLDFYSKCELLE 330
+ TF+ +L A AD+ + G Q H ++K GF FV N+++D Y KC +E
Sbjct: 385 THYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVE 444
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
E F +M E D VSWNA+I G + + EA+EL ++ML G P+ T +L+
Sbjct: 445 EGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACG 504
Query: 391 DIPAIEWGKQTHCCI-----VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-N 444
+E G+ + V P D + +VD+ + G L +A+ + + + + +
Sbjct: 505 HAGFVEEGRHYFSSMTRDFGVAPLRDHY----TCMVDLLGRAGFLEEAKSIIEEMPVQPD 560
Query: 445 LVSWNTMLVGYAQH 458
V W ++L H
Sbjct: 561 SVIWGSLLAACKVH 574
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 195/406 (48%), Gaps = 76/406 (18%)
Query: 163 KIFLLSRKSGVAISEFSCAS----VLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMG 217
KIFL K +S F+ +S +L +C L + ++ +H+ V K + F+
Sbjct: 4 KIFL---KLAGDLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNR 60
Query: 218 LINLYAKCEK-------------------------------LDLASRVFSNIQLPDLTAW 246
LI+ YAKC LD A +F ++ D W
Sbjct: 61 LIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
++++ G+AQ + EA+ F M G + +E TF+ L A + + + G Q+HSLI K
Sbjct: 121 NSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAK 180
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
S ++ + ++D YSKC + ++ + FDEM + +VVSWN+LI + + EA+++
Sbjct: 181 SPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKV 240
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-PGFDSNVVIGSALVDMYA 425
+ ML P+ T +++++ + + AI+ G++ H +VK +++++ +A VDMYA
Sbjct: 241 FQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYA 300
Query: 426 KCGRLNDARKVFD-------------------------------HLSSKNLVSWNTMLVG 454
KC R+ +AR +FD ++ +N+VSWN ++ G
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC-----VHIGL 495
Y Q+G EAL ++ +++ + P TF +L AC +H+G+
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGM 406
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 149/295 (50%), Gaps = 32/295 (10%)
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
I R +H+ +IK GFS+ F+ N ++D Y+KC LE+ + FD+M + +V +WN+++ G
Sbjct: 36 AIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTG 95
Query: 354 HLASCHYGEAIELLKDMLFEGHCP-------------------------------NLYTY 382
EA L + M C N YT+
Sbjct: 96 LTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTF 155
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
++ L+ S + + G Q H I K S+V IGSALVDMY+KCG +NDA++VFD +
Sbjct: 156 ASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGD 215
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
+N+VSWN+++ Y Q+G EAL+++ +M E+ ++P++ T V+SAC + ++ G
Sbjct: 216 RNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+++ + + + V ++A + + A S PI N + ++SG
Sbjct: 276 HARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMVSG 329
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG ++ N L+ MYVK + + +F +M ER+ +SW+A+I GF+Q G AL
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALEL 480
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GL-ELNSHVSNCLINMY 121
FR M+ +P++ T +G +SAC G G+ M R G+ L H + C++++
Sbjct: 481 FREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYT-CMVDLL 539
Query: 122 GKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
G+ G L A+ + + ++ +S+ W SLL++
Sbjct: 540 GRAGFLEEAKSIIEEMPVQPDSVIWGSLLAA 570
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 112/287 (39%), Gaps = 76/287 (26%)
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV-------------- 446
H ++K GF + V I + L+D YAKCG L D R++FD + +N+
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101
Query: 447 -----------------SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+WN+M+ G+AQH EAL ++MM + N+ TF LSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161
Query: 490 CVHIGLVEEGWH--------------YFNSMIRD-----------HGISPRMD--HIASV 522
C + + G Y S + D + M ++ S
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSW 221
Query: 523 VHLFACRGQTRRAYEFIK------SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
L C Q A E +K S +EP++V ++S C + + +G+ +++
Sbjct: 222 NSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVK 281
Query: 577 TDPEDTSAHIMLSNVYA----------EANMWDETAKVRKIMKEKSL 613
D I+LSN + EA ++ +R ++ E S+
Sbjct: 282 MDK--LRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSM 326
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 211/671 (31%), Positives = 355/671 (52%), Gaps = 10/671 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG V N L+ M+ I +A +FD+M ER+ ISW+++I+ G E +
Sbjct: 186 VIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKS 245
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L YF M + +Y T + C S + R G+ +HG + +SGLE N V N L++M
Sbjct: 246 LEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSM 305
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G A+FVF ER+ ISW S+++S+ G + L++ + ++ A + +
Sbjct: 306 YSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTF 365
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ L AC L LK+ +H+ V L + + L+ +Y K + A RV +
Sbjct: 366 TTALSACYNLETLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPD 422
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQ 299
D W+ALIGG+A + AI+ F + G+ + +T +L AF + + G
Sbjct: 423 RDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMP 482
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ I+ GF TFV ++++ Y++C L S FD + + +WNA+++ A+ H
Sbjct: 483 IHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILS---ANAH 539
Query: 360 YG---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
YG EA++L+ M +G + +++S I ++ ++ G+Q H I+K GF+SN +
Sbjct: 540 YGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYV 599
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+A +DMY KCG ++D ++ S++ SWN ++ A+HG ++A E + M + +
Sbjct: 600 LNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGL 659
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
+P+ TF+ +LSAC H GLV+EG YF+SM G+ ++H ++ L G+ A
Sbjct: 660 RPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAE 719
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
FI P+ P +VWR LL+ CK H +L L R AA+++ D D SA+++ SNV A
Sbjct: 720 NFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTR 779
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W + VRK M+ ++KK CSW +L+N++ F Q +++ + +L +
Sbjct: 780 RWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIR 839
Query: 657 DGGYVPDPIYS 667
+ GY+PD YS
Sbjct: 840 EAGYMPDTSYS 850
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 250/472 (52%), Gaps = 4/472 (0%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY KF I AQ +FD+MPERN SW+ L+SGF ++G + A+ +F M+ + P+ Y
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 79 YVGAVSACASRGDARSGK-EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
V+AC G G ++H + + GL + V L++ YG G ++ VF
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
E N +SW SL+ Y G + ++ R+ GV +E + A+V+ +C VL + +G
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+ V K L+ VA LI+++ C+ ++ AS VF +++ D +W+++I G
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
++++ F +M + +T S +L + GR LH +++K G S V N
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCN 300
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
++L YS+ E++ F +M E D++SWN+++A H+ + +Y A+ELL +ML
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT 360
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
N T++ L+ ++ + K H ++ G N++IG+ALV MY K G + A++V
Sbjct: 361 NYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVC 417
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ ++ V+WN ++ G+A + A+E +++++E + N T + +LSA
Sbjct: 418 KIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA 469
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 153/577 (26%), Positives = 280/577 (48%), Gaps = 8/577 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G +V LL Y F + + +F E+ E N++SW++L+ G++ G +
Sbjct: 85 VIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEV 144
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ +R + + N + +C D G ++ G + +SGL+ V+N LI+M
Sbjct: 145 MSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISM 204
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+G C + A VFD ER++ISW S++++ G L+ F R + +
Sbjct: 205 FGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITI 264
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+++L C NL+ G +H +V K LE + V L+++Y++ K + A VF ++
Sbjct: 265 SALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRE 324
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL +W++++ + G A++L ++M + + VTF+ L A ++ ET+ + +
Sbjct: 325 RDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNL-ETL--KIV 381
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +I +G + N ++ Y K + + + M + D V+WNALI GH +
Sbjct: 382 HAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEP 441
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILN--ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
AIE + EG N T N+L+ +S D ++ G H IV GF+ + S
Sbjct: 442 NAAIEAFNLLREEGVPVNYITIVNLLSAFLSPD-DLLDHGMPIHAHIVVAGFELETFVQS 500
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+L+ MYA+CG LN + +FD L++KN +WN +L A +G G EAL++ M+ + I
Sbjct: 501 SLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHL 560
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ +F + ++ L++EG +S+I HG + + + ++ G+ +
Sbjct: 561 DQFSFSVAHAIIGNLTLLDEG-QQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFR- 618
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL 575
I P ++ W L+S H R A ++L
Sbjct: 619 ILPQPRSRSQRSWNILISALARHGFFQQAREAFHEML 655
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 226/453 (49%), Gaps = 22/453 (4%)
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY K G + AQ VFD ERN SW +L+S + + G + ++ F + GV S +
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 180 CASVLGACAVLGNLKVG-MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
AS++ AC G + G Q+H+ V KC L D FV L++ Y + VF I
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ P++ +W++L+ GYA G E + ++ ++ G+ +E + V+ + + + + G
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+ +IK G + VAN+++ + C+ +EE+ FD+M E D +SWN++I + +
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
H +++E M + + T S +L + + WG+ H +VK G +SNV + +
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCN 300
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+L+ MY++ G+ DA VF + ++L+SWN+M+ + +G ALE+ M + +
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT 360
Query: 479 NDNTFIGVLSAC--------VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
N TF LSAC VH ++ G H+ N +I + ++V ++ G
Sbjct: 361 NYVTFTTALSACYNLETLKIVHAFVILLGLHH-NLIIGN-----------ALVTMYGKFG 408
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
A K P + ++V W L+ G +K+
Sbjct: 409 SMAAAQRVCKIMP-DRDEVTWNALIGGHADNKE 440
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 223/707 (31%), Positives = 349/707 (49%), Gaps = 52/707 (7%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
+HL+ Y+ ++ A L P + V W++LI + G L F LM
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS 122
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
P+ YT+ AC R G+ H +G N V N L+ MY +C LS A+
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVL 190
VFD + +SW S++ SY + G+ L++F ++ + G + +VL CA L
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G +G Q+H + + FV L+++YAKC +D A+ VFSN+ + D+ +W+A++
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 251 GGYAQLGKACEAIDLFVKM-----------------------------------FSSGLM 275
GY+Q+G+ +A+ LF KM SSG+
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKM-------GFSSFTFVANTVLDFYSKCEL 328
P+EVT VL A V + G+++H IK G V N ++D Y+KC+
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 329 LEESLKTFDEMD--EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC---PNLYTYS 383
++ + FD + E DVV+W +I G+ +A+ELL +M FE C PN +T S
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM-FEEDCQTRPNAFTIS 481
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDS-NVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
L + + A+ GKQ H ++ ++ + + + L+DMYAKCG ++DAR VFD++ +
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA 541
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
KN V+W +++ GY HG G EAL I+ M+ K + T + VL AC H G++++G Y
Sbjct: 542 KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
FN M G+SP +H A +V L G+ A I+ P+EP VVW LS C+ H
Sbjct: 602 FNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
Query: 563 DLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWT 622
+ LG YAAEKI ++ +LSN+YA A W + ++R +M+ K +KK GCSW
Sbjct: 662 KVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Query: 623 ELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
E F ++++V+ + D GYVP+ ++ H
Sbjct: 722 EGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALH 768
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 149/533 (27%), Positives = 250/533 (46%), Gaps = 67/533 (12%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF NV N L+ MY + ++DA+K+FDEM +V+SW+++I ++++G P+VAL
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 213
Query: 62 NYFRLMV----CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
F M C P+ T V + CAS G GK++H S + N V NCL
Sbjct: 214 EMFSRMTNEFGC---RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK------- 170
++MY KCG++ A VF ++ +SW ++++ Y Q G +++F ++
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 171 ----------------------------SGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
SG+ +E + SVL CA +G L G +IH
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 203 VFKCALEFDK-------FVAMGLINLYAKCEKLDLASRVFSNI--QLPDLTAWSALIGGY 253
K ++ K V LI++YAKC+K+D A +F ++ + D+ W+ +IGGY
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 254 AQLGKACEAIDLFVKMFSSGLM--PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
+Q G A +A++L +MF P+ T S L A A + G+Q+H+ ++ ++
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 312 FT-FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
FV+N ++D Y+KC + ++ FD M + V+W +L+ G+ + EA+ + +M
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVVIGSALVDMYA 425
G + T +L S I+ G + V PG + + LVD+
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHY----ACLVDLLG 626
Query: 426 KCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQEN 474
+ GRLN A ++ + + V W L HG LG A E + + N
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASN 679
>gi|326522859|dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 213/650 (32%), Positives = 367/650 (56%), Gaps = 15/650 (2%)
Query: 21 VKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYV 80
+K R+ DA LFD MP +NV++W++ +SG ++ G PE A F MV + N +
Sbjct: 40 MKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACN 99
Query: 81 GAVSACASRGDA--RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
A++ACA+ G R+G+++H R+G ++ V +CL+ +Y +CG +A+ V
Sbjct: 100 AALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARME 159
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
+ +++ SL+S+ C+ GE + GV +E + S+L AC L +G+Q
Sbjct: 160 SPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACC---PLVLGVQ 216
Query: 199 IHSLVFKCALEFDK--FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
IH + K A+ F + + + L++ Y++ + D+A VF N+Q ++ W ++ + +
Sbjct: 217 IHGYMIK-AMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRD 275
Query: 257 GKACEAIDLFVKMFSSGLM-PSEVTFSYVLGAFADVKETIG-GRQLHSLIIKMGFSSFTF 314
G+ +A+ LF +M S G++ P+E FS LGA E+I G QLHSL IK G +S
Sbjct: 276 GRPEDALQLFDEMISEGVVSPNEFAFSIALGAC----ESIALGSQLHSLAIKHGLASHLR 331
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V+N +L Y + L+++ F +++ D+VSW A I+ + + H +AI LL M +G
Sbjct: 332 VSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQG 391
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
PN Y +S++L+ +D+ ++ G+Q HC +K G D G+AL++MY+KCG++ AR
Sbjct: 392 LTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPAR 451
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
FD + +++ SWN+++ G+AQHG L+ +S M N +PN++T +GVL+AC H G
Sbjct: 452 LAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAG 511
Query: 495 LVEEGWHYFNS-MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
LV+EG +F S M +G H A +V + G+ A I+ P EP +VW+
Sbjct: 512 LVDEGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKT 571
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LL+ C+ H +L GR AAEK++ +D+++++++S ++A W + VR+ M E +
Sbjct: 572 LLASCRLHGNLETGRLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGV 631
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+K+ G SW E++N++H F + ++ ++ +LS + D Y D
Sbjct: 632 RKEAGRSWVEVRNEVHTFVAQDVSHPDSPSIYRMLWELSDAMRDTAYDED 681
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 228/476 (47%), Gaps = 20/476 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + + L+ +Y + A+ + M +V+++++L+S + G +A
Sbjct: 124 VRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCRSGEFGMAA 183
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
M+ + PN +T ++AC G +IHG M ++ G + + S+ L++
Sbjct: 184 EALGQMMGHGVMPNEHTVTSILAACCP---LVLGVQIHGYMIKAMGFSQSVYTSSTLVDF 240
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG-VAISEFS 179
Y + G A+ VFD +N ++W +++ + + G L++F G V+ +EF+
Sbjct: 241 YSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEGVVSPNEFA 300
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ LGAC ++ +G Q+HSL K L V+ L+++Y + + +F I+
Sbjct: 301 FSIALGACE---SIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIE 357
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PD+ +W+A I Y Q G +AI L +M S GL P++ FS VL + AD+ GRQ
Sbjct: 358 DPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQ 417
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H L +K+G T N +++ YSKC + + FD MD DV SWN+LI GH
Sbjct: 418 FHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGH---AQ 474
Query: 360 YGEAIELLK---DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+GE +LK +M G PN T +L + ++ G + + + +
Sbjct: 475 HGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTP 534
Query: 417 G--SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALE 466
+ +VDM + GR +DA + + + ++ W T+L HG GR A E
Sbjct: 535 PHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLETGRLAAE 590
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
LD K + ++L FD M +VV+W + ++G + A E+ DM+ G N
Sbjct: 36 LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALND 95
Query: 380 Y--TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ + ++ A+ G+Q H V+ GF + +GS LV++YA+CG A V
Sbjct: 96 FACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVL 155
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ S ++V++ +++ + G A E M + + PN++T +L+AC + L
Sbjct: 156 ARMESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLVL-- 213
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
G MI+ G S + +++V ++ G+
Sbjct: 214 -GVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGE 246
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+ VV +D K GR+ DA +FD + KN+V+W + + G ++G A E+++ M
Sbjct: 27 AEVVRDCKRLDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADM 86
Query: 472 QENKIKPND 480
E+ + ND
Sbjct: 87 VESGVALND 95
>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 201/652 (30%), Positives = 358/652 (54%), Gaps = 9/652 (1%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P+V+ L +K R++DA LFD MP +NV++W+ ISG ++ G PE A F M
Sbjct: 40 PDVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADM 99
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARS--GKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
+ + N + A++ACA+ G G+++H R+G ++ + +CLI +Y +CG
Sbjct: 100 LESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCG 159
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ +A+ VF + + + SL+S+ C+ G+ +++ + G+ +E + S+L
Sbjct: 160 SMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLA 219
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
C + +G QIH + K + + LI+ Y++ D+A VF N+ ++ +
Sbjct: 220 ECPRM----IGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVS 275
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W +++ + G+ +A+ +F +M S + P+E FS LGA V GRQ+H I
Sbjct: 276 WCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGACGSV---CLGRQIHCSAI 332
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K + V+N +L Y + + E +++ D+VSW A I+ + + +A+
Sbjct: 333 KCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVA 392
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
LL M EG PN Y +S+ L+ +D+ ++ G+Q HC +K G D V G+AL++MY+
Sbjct: 393 LLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYS 452
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KCG++ AR FD ++ +++SWN+++ G AQHG LE +S M + +P+D+TFI
Sbjct: 453 KCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIA 512
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
VL C H GLV+EG +F M +G++P H A ++ + G+ A IK+ P E
Sbjct: 513 VLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPFE 572
Query: 546 PNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVR 605
P+ ++W+ LL+ CK HK+L +G+ A +K++ D+++++++SN+YA W + +VR
Sbjct: 573 PDVLIWKTLLASCKLHKNLDIGKLATDKLMELSERDSASYVLMSNLYAMHEEWQDAERVR 632
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
+ M E +KKD G SW E++N++ F + +++++ +L V + D
Sbjct: 633 RRMDEIGVKKDAGWSWIEVKNEVSTFVARDTSHSDSASIYQMLAELVVVMQD 684
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 218/459 (47%), Gaps = 9/459 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + + L+ +Y + + A+++F M +V+ +++L+S + G A+
Sbjct: 137 VRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAV 196
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
M+ L+PN +T ++ C G++IHG M + + + S LI+ Y
Sbjct: 197 EVLCQMMRQGLQPNEHTMTSMLAECPR----MIGEQIHGYMLKVMGSQSVYASTALIDFY 252
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+ G A+ VF+ +N +SW S++ + G L++F V +EF+ +
Sbjct: 253 SRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFS 312
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
LGAC G++ +G QIH KC L D V+ L+++Y + + V I+ P
Sbjct: 313 IALGAC---GSVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENP 369
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
DL +W+A I Q G + +A+ L ++M S G P++ FS L + AD+ GRQLH
Sbjct: 370 DLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLH 429
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
L +K+G N +++ YSKC + + FD M+ HDV+SWN+LI G
Sbjct: 430 CLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAAN 489
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV-KPGFDSNVVIGSAL 420
+E +M G P+ T+ +L + ++ G+ + + G + +
Sbjct: 490 LVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACM 549
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
+DM + GR ++A + ++ +++ W T+L H
Sbjct: 550 IDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLASCKLH 588
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 181/569 (31%), Positives = 315/569 (55%), Gaps = 1/569 (0%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
K++H + R+ L+ ++ +I++Y LL A VF ++W S++ +
Sbjct: 24 AKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTD 82
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
L F+ R SG SVL +C ++ +L+ G +H + + ++ D +
Sbjct: 83 QSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
L+N+Y+K +D +VF + D+ +++ +I GYAQ G +A+ + +M +S L
Sbjct: 143 GNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDL 202
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
P T S VL F++ + + G+++H +I+ G S ++ ++++D Y+K +E+S +
Sbjct: 203 KPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSER 262
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
F + D +SWN+L+AG++ + Y EA+ L + M+ P +S+++ + +
Sbjct: 263 VFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLAT 322
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
+ GKQ H +++ GF N+ I SALVDMY+KCG + ARK+FD ++ + VSW +++G
Sbjct: 323 LHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMG 382
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
+A HG G EA+ ++ M+ +KPN F+ VL+AC H+GLV+E W YFNSM + +G++
Sbjct: 383 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 442
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKI 574
++H A+V L G+ AY+FI +EP VW LLS C HK+L L AEKI
Sbjct: 443 ELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 502
Query: 575 LSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTS 634
+ D E+ A++++ N+YA W E AK+R +++K L+K CSW E++NK H F +
Sbjct: 503 FTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSG 562
Query: 635 RFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ ++E + + + GYV D
Sbjct: 563 DRSHPSMDRINEFLKAVMEQMEKEGYVAD 591
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 230/446 (51%), Gaps = 4/446 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
++ +Y +++A +F + V++W ++I F+ + AL F M P+
Sbjct: 45 VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPD 104
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
+ + + +C D R G+ +HG + R G++ + + N L+NMY K + S + VF+
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFE 164
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
++ +S+ ++++ Y Q G + L++ S + F+ +SVL + ++
Sbjct: 165 LMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLK 224
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +IH V + ++ D ++ L+++YAK +++ + RVFS++ D +W++L+ GY Q
Sbjct: 225 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQ 284
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G+ EA+ LF +M S+ + P V FS V+ A A + G+QLH +++ GF F+
Sbjct: 285 NGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFI 344
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
A+ ++D YSKC ++ + K FD M+ HD VSW A+I GH H EA+ L ++M +G
Sbjct: 345 ASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 404
Query: 376 CPNLYTYSNILNISSDIPAIE--WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN + +L S + ++ WG V G + + +A+ D+ + G+L +A
Sbjct: 405 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY-GLNQELEHYAAVADLLGRAGKLEEA 463
Query: 434 RKVFDHLSSKNLVS-WNTMLVGYAQH 458
+ + S W+T+L + H
Sbjct: 464 YDFISKMRVEPTGSVWSTLLSSCSVH 489
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 201/395 (50%), Gaps = 13/395 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G ++ T N L+ MY K I+ +K+F+ MP ++V+S++ +I+G++Q GM E A
Sbjct: 131 IVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDA 190
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L R M L+P+ +T + + D GKEIHG + R G++ + ++ + L++M
Sbjct: 191 LRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDM 250
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K + ++ VF R+SISW SL++ Y Q G + L++F + V +
Sbjct: 251 YAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAF 310
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+SV+ ACA L L +G Q+H V + + F+A L+++Y+KC + A ++F + L
Sbjct: 311 SSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNL 370
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD---VKETIGG 297
D +W+A+I G+A G EA+ LF +M G+ P++V F VL A + V E G
Sbjct: 371 HDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG- 429
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS-WNALIAGHLA 356
+S+ G + V D + LEE+ +M S W+ L L+
Sbjct: 430 -YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTL----LS 484
Query: 357 SCHYGEAIEL---LKDMLFEGHCPNLYTYSNILNI 388
SC + +EL + + +F N+ Y + N+
Sbjct: 485 SCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNM 519
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/644 (32%), Positives = 339/644 (52%), Gaps = 5/644 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ + L+ Y KF A+K+FD M +RNV+ W+ +I +++ G +VA
Sbjct: 74 VIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVA 133
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ + +M ++P+ T +G +S + +H + + G + ++N ++N+
Sbjct: 134 FSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALANSMLNV 190
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + AQ +F+ R+ ISW SL+S Y Q G L++ + + G+ + +
Sbjct: 191 YCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTF 250
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S++ A A+ L VG +H + + LE D + LI +Y KC ++ A R+F +
Sbjct: 251 GSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMH 310
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+A+I G Q A A+ +F +M S +MPS T + VL A A++ G +
Sbjct: 311 KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSV 370
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H I++ N+++ Y+KC LE+S FD M D+VSWNA+++GH + H
Sbjct: 371 HGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHL 430
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A+ L +M P+ T ++L + I A+ GK H + K ++I +AL
Sbjct: 431 CKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTAL 490
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMY+KCG L A+K FD + ++LVSW++++ GY HG G AL +YS I+PN
Sbjct: 491 VDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNH 550
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
++ +LSAC H GLV++G +F+SM +D GI PR++H A +V L + G+ AY F K
Sbjct: 551 VIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYK 610
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+P+ V LL C+T ++ LG A +I+ P + ++ L++ YA WD
Sbjct: 611 RMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDG 670
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST--SRFAQFQGI 642
+V MK LKK G S+ EL + F T S QF+ I
Sbjct: 671 VGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEI 714
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 267/519 (51%), Gaps = 5/519 (0%)
Query: 43 SWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM 102
S++A+I+ S G L + M+ P+ +T+ V AC S G H R+
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 103 YRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGL 162
G +S+++ LIN Y K G SA+ VFD +RN + W +++ Y + GEH
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 163 KIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
++ + R+ G+ S + +L L +L+ +H+ V + D +A ++N+Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALANSMLNVY 191
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
KC +++ A +F + D+ +W++L+ GYAQLG E + L ++M + G+ P + TF
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
++ A A + G+ +H I++ G + + +++ Y KC + + + F+ M
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
DV+SW A+I+G + + A+ + + ML P+ T +++L +++ + G H
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
I++ ++ ++LV MYAKCG L + VFD +S +++VSWN ++ G+AQ+G
Sbjct: 372 GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLC 431
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
+AL +++ M++ + +P+ T + +L AC IG + +G + ++ + + P + ++
Sbjct: 432 KALLLFNEMRKARQRPDSITVVSLLQACASIGALHQG-KWIHNFVTKSCLGPCILIDTAL 490
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
V +++ G A + P + + V W +++G +H
Sbjct: 491 VDMYSKCGDLGSAQKCFDRMP-QQDLVSWSSIIAGYGSH 528
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 142/258 (55%), Gaps = 3/258 (1%)
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
SR + P +++A+I + G C+ + + M S+ P TF ++ A +
Sbjct: 2 SRAKPSFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSL 61
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
G H +I G+SS +++A ++++FYSK + + K FD MD+ +VV W +I
Sbjct: 62 DLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMI 121
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
+ + + A + M +G P+ T +L + S + + + H C+++ GF
Sbjct: 122 GCYTRAGEHDVAFSMYNIMRRQGIQPSSVT---MLGLLSGVLELVHLQCLHACVIQYGFG 178
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
S+V + ++++++Y KCGR+ DA+ +F+ + +++++SWN+++ GYAQ G RE L++ M
Sbjct: 179 SDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRM 238
Query: 472 QENKIKPNDNTFIGVLSA 489
+ + I+P+ TF ++SA
Sbjct: 239 KTDGIEPDQQTFGSLVSA 256
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 31/274 (11%)
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
S+NA+I + + + + ML P+ +T+ +++ + + G H +
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
+ G+ S+ I ++L++ Y+K G ARKVFD + +N+V W TM+ Y + G A
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 466 EIYSMMQENKIKPNDNTFIGVLSA--------CVHIGLVEEGW----HYFNSMIRDHGIS 513
+Y++M+ I+P+ T +G+LS C+H +++ G+ NSM+ +
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKC 194
Query: 514 PRMDHIASVVHLFACR---------------GQTRRAYEFI---KSSPIEPNKVVWRCLL 555
R++ ++ L R G R + + K+ IEP++ + L+
Sbjct: 195 GRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLV 254
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
S L +G+ IL E S HI S
Sbjct: 255 SAAAMQSKLGVGKMVHGHILRAGLEQDS-HIETS 287
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 214/652 (32%), Positives = 349/652 (53%), Gaps = 10/652 (1%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE-PNYY 77
+Y K + + A+K+FDE P NV W++ + + + E L F LM+C E P+ +
Sbjct: 45 LYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNF 104
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH--VSNCLINMYGKCGLLSSAQFVFD 135
T A+ ACA GK IHG + E+ S V + L+ +Y KCG + A VF+
Sbjct: 105 TIPIALKACAGLRMLELGKVIHG-FAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFE 163
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLK 194
+++ W S+++ Y Q + L +F + V + + SV+ ACA L N+K
Sbjct: 164 EFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVK 223
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAK--CEKLDLASRVFSNIQLPDLTAWSALIGG 252
G +H LV + + D + L+NLYAK CEK+ A+ +FS + D+ +WS +I
Sbjct: 224 AGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKI--AANLFSKMPEKDVISWSTMIAC 281
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
YA A EA++LF +M P+ VT L A A + G+++H + + GF
Sbjct: 282 YANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELD 341
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V+ ++D Y KC +E++ F + + DVVSW AL++G+ + +++ + ++ML
Sbjct: 342 FSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLS 401
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+G P+ IL SS++ + H +V+ GF+SNV +G++L+++Y+KCG L D
Sbjct: 402 DGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGD 461
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK-IKPNDNTFIGVLSACV 491
A K+F + +++V W++M+ Y HG G EALEI+ M +N ++PN+ TF+ +LSAC
Sbjct: 462 AVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACS 521
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
H GLVEEG F+ M+ D+ + P +H +V L GQ +A + I PI VW
Sbjct: 522 HAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVW 581
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
LL C+ H ++ +G AA+ + DP +I+LSN+YA WD A++R +KE+
Sbjct: 582 GALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKER 641
Query: 612 SLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
LKK G S E++ +H F S ++E++ +L + Y+PD
Sbjct: 642 GLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPD 693
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 254/465 (54%)
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
+ H+ +F L++D + +Y ++D AS VF +I P W+ +I G+A G
Sbjct: 738 KTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDG 797
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+ +++L+ KM GL P + F + L + A + + G+ +H ++ G S+ FV
Sbjct: 798 RFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDA 857
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
++D Y+KC +E + FD+M D+VSW ++I+G+ + + E + M G P
Sbjct: 858 ALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIP 917
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
N + ++L ++ A+ G+ H +++ GF+ ++++ +A++DMY+KCG L+ AR +F
Sbjct: 918 NRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLF 977
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D + K+LV W+ M+ Y HG GR+A++++ M + ++P+ TF VLSAC H GL+E
Sbjct: 978 DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLE 1037
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
EG YF M + I+ ++ + A +V L GQ A + I++ P+EP+ +W LL
Sbjct: 1038 EGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGA 1097
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
C+ H +L L A+ + DP H++LSN+YA + W+E KVRK+M + K
Sbjct: 1098 CRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQ 1157
Query: 618 GCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
G S E N++H F + Q L+ + +L+ + GYVP
Sbjct: 1158 GFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVP 1202
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 246/476 (51%), Gaps = 9/476 (1%)
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
+ RS ++H +++++G+ ++ + L ++Y KC L +A+ VFD + N W S L
Sbjct: 16 NGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLR 75
Query: 151 SYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC-AL 208
SYC+ + L++F L+ +G A F+ L ACA L L++G IH K +
Sbjct: 76 SYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEI 135
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
D FV L+ LY+KC ++ A +VF Q PD W++++ GY Q EA+ LF +
Sbjct: 136 GSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQ 195
Query: 269 M-FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK-- 325
M ++ VT V+ A A + G +H L+I+ F + N++L+ Y+K
Sbjct: 196 MVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTG 255
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
CE + +L F +M E DV+SW+ +IA + + EA+ L +M+ + PN T +
Sbjct: 256 CEKIAANL--FSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSA 313
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L + +E GK+ H V GF+ + + +AL+DMY KC ++A +F L K++
Sbjct: 314 LQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDV 373
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
VSW +L GYAQ+G+ +++ ++ M + I+P+ + +L+A +G+ ++
Sbjct: 374 VSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGY 433
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++R G + + AS++ L++ G A + K + + V+W +++ H
Sbjct: 434 VVRS-GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIH 487
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 219/434 (50%), Gaps = 15/434 (3%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV---CCVL 72
L+ +Y K ++ +A K+F+E + + W+++++G+ Q PE AL F MV C VL
Sbjct: 145 LVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVL 204
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+P T V VSACA + ++G +HG + R + + + N L+N+Y K G A
Sbjct: 205 DP--VTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAAN 262
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
+F E++ ISW ++++ Y L +F + + + S L ACAV N
Sbjct: 263 LFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRN 322
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L+ G +IH + E D V+ LI++Y KC D A +F + D+ +W AL+ G
Sbjct: 323 LEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSG 382
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
YAQ G A +++ +F M S G+ P V +L A +++ LH +++ GF+S
Sbjct: 383 YAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSN 442
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
FV ++++ YSKC L +++K F M DVV W+++IA + GEA+E+ M+
Sbjct: 443 VFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVK 502
Query: 373 EGHC-PNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVVIGSALVDMYAK 426
PN T+ +IL+ S +E G + H ++P + + +VD+ +
Sbjct: 503 NSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGI----MVDLLGR 558
Query: 427 CGRLNDARKVFDHL 440
G+L A + + +
Sbjct: 559 IGQLGKAMDIINRM 572
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/364 (32%), Positives = 182/364 (50%), Gaps = 17/364 (4%)
Query: 18 LMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYY 77
+MYV F+RI+ A +F+++P W+ +I GF+ G +L + M+ L+P+ +
Sbjct: 760 IMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKF 819
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
+ A+ +CA D + GK IH + G + V L++MY KCG + +A+ VFD
Sbjct: 820 AFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKM 879
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
R+ +SW S++S Y G + L F L R SGV + S SVL AC LG L+ G
Sbjct: 880 AVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGE 939
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
HS V + EFD VA ++++Y+KC LDLA +F DL WSA+I Y G
Sbjct: 940 WFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHG 999
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL-----IIKMGFSSF 312
+AIDLF +M +G+ PS VTF+ VL A + G+ L +I S++
Sbjct: 1000 HGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNY 1059
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIEL---LK 368
++D + L E++ + M E D W +L L +C ++L +
Sbjct: 1060 A----CMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSL----LGACRIHNNLDLAEKIA 1111
Query: 369 DMLF 372
D LF
Sbjct: 1112 DHLF 1115
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 146/288 (50%), Gaps = 1/288 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I F ++ N LL +Y K A LF +MPE++VISWS +I+ ++ A
Sbjct: 232 VIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEA 291
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
LN F M+ EPN T V A+ ACA + GK+IH G EL+ VS LI+M
Sbjct: 292 LNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDM 351
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC A +F +++ +SWV+LLS Y Q G + +F G+ +
Sbjct: 352 YMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAV 411
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+L A + LG + + +H V + + FV LI LY+KC L A ++F + +
Sbjct: 412 VKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIV 471
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGA 287
D+ WS++I Y G+ EA+++F +M +S + P+ VTF +L A
Sbjct: 472 RDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSA 519
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 207/440 (47%), Gaps = 23/440 (5%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
K+ H +++ GL+ +S + MY + +A VF+ S W ++ +
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G + L+++ + G+ +F+ L +CA L +L+ G IH + C D FV
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L+++YAKC ++ A VF + + DL +W+++I GYA G E + F M SSG++
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P+ V+ VL A ++ G HS +I+ GF VA ++D YSKC L+ +
Sbjct: 917 PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
FDE D+V W+A+IA + H +AI+L M+ G P+ T++ +L+ S +
Sbjct: 977 FDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLL 1036
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSA-LVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLV 453
E GK + + + + A +VD+ + G+L++A + +++ + S W ++L
Sbjct: 1037 EEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL- 1095
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
A I++ + + K D+ F H+ V G+H S I +
Sbjct: 1096 ---------GACRIHNNLDLAE-KIADHLF--------HLDPVHAGYHVLLSNI--YAAK 1135
Query: 514 PRMDHIASVVHLFACRGQTR 533
R + + V + A RG +
Sbjct: 1136 SRWNEVEKVRKMMARRGANK 1155
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 128/532 (24%), Positives = 231/532 (43%), Gaps = 37/532 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF+ NV L+ +Y K + DA KLF M R+V+ WS++I+ + G A
Sbjct: 434 VVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEA 493
Query: 61 LNYFRLMV-CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLI 118
L F MV + PN T++ +SAC+ G G +I RM L +S ++
Sbjct: 494 LEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMV 553
Query: 119 NMYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS-----YCQCGEHVHGLKIFLLSRKSG 172
++ G+ G L A + + + W +LL + + GE +L +G
Sbjct: 554 DLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAG 613
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
I + +V G + L+ ++ L K ++ + +
Sbjct: 614 YYILLSNIYAVDGKWDNVAELRTRIKERGL--------KKMFGQSMVEVRGGVHSFLASD 665
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
R + Q + L AQ+GK DL + +G + + F + A
Sbjct: 666 RFHPDSQ----KIYELLRKLEAQMGKEVYIPDLDFLLHDTGAV---LQFWQRIKATESKY 718
Query: 293 ETIGG-------------RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
+TIG ++ H+ I G + + Y ++ + F+++
Sbjct: 719 KTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDI 778
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
WN +I G + ++EL M+ +G P+ + + L + + ++ GK
Sbjct: 779 PNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGK 838
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
H +V G +++ + +ALVDMYAKCG + AR VFD ++ ++LVSW +M+ GYA +G
Sbjct: 839 VIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNG 898
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
E L + +M+ + + PN + + VL AC ++G + +G +F+S + G
Sbjct: 899 YNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKG-EWFHSYVIQTG 949
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 129/244 (52%), Gaps = 12/244 (4%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY K I A+ +FD+M R+++SW+++ISG++ G L +F LM + PN
Sbjct: 859 LVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPN 918
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
+ + + AC + G R G+ H + ++G E + V+ +++MY KCG L A+ +FD
Sbjct: 919 RVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFD 978
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLK---IFLLSRKSGVAISEFSCASVLGACAVLGN 192
+ ++ + W ++++SY G H HG K +F K+GV S + VL AC+ G
Sbjct: 979 ETAGKDLVCWSAMIASY---GIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035
Query: 193 LKVG---MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSA 248
L+ G Q+ + F A + + M ++L + +L A + N+ + PD + W +
Sbjct: 1036 LEEGKMYFQLMTEEFVIARKLSNYACM--VDLLGRAGQLSEAVDLIENMPVEPDASIWGS 1093
Query: 249 LIGG 252
L+G
Sbjct: 1094 LLGA 1097
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 83/154 (53%), Gaps = 4/154 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +GF +++ ++ MY K ++ A+ LFDE ++++ WSA+I+ + G A
Sbjct: 945 VIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKA 1004
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN--CLI 118
++ F MV + P++ T+ +SAC+ G GK ++ ++ + +SN C++
Sbjct: 1005 IDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGK-MYFQLMTEEFVIARKLSNYACMV 1063
Query: 119 NMYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
++ G+ G LS A + + +E ++ W SLL +
Sbjct: 1064 DLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGA 1097
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/566 (34%), Positives = 324/566 (57%), Gaps = 1/566 (0%)
Query: 97 EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
+I+ ++ +GL+ + L+N G +S A+ +FD + + W +++ Y + G
Sbjct: 93 QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152
Query: 157 EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
H ++++ + + V+ FS VL AC+ L L++G ++H +F+ E D FV
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQN 212
Query: 217 GLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
GL+ LYAKC ++ A+ VF + + +W+++I GYAQ G+ EA+ +F +M + + P
Sbjct: 213 GLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP 272
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
+ VL A+ DV++ G+ +H +IKMG + ++ Y+KC + + F
Sbjct: 273 DWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFF 332
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
++++ ++ WNA+I+G++ + + EAIEL + M + P+ T ++ + + I ++E
Sbjct: 333 NQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLE 392
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
+ I F ++V++ ++L+D YAKCG ++ AR VFD + K++V W+ M+VGY
Sbjct: 393 LARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYG 452
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
HG GRE++ ++ M++ + PND TF+G+L+AC + GLVEEGW F+ M RD+GI PR
Sbjct: 453 LHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRH 511
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
H A VV L G RAY F+ + PIEP VW LLS CK H+ + LG YAAE++ S
Sbjct: 512 QHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFS 571
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRF 636
DP +T ++ LSN+YA + +WD AKVR +M+EK L K G S E+ K+ F
Sbjct: 572 LDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDK 631
Query: 637 AQFQGIDLHEVMNQLSVHLFDGGYVP 662
+ ++ E + L L + G+VP
Sbjct: 632 THPRSKEIFEEVEDLERRLKEAGFVP 657
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 216/426 (50%), Gaps = 3/426 (0%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALN-YFRLMVCCVLEPNYYTYVGAVSACA 87
A+KLFD+ P+ +V W+A++ +S+ G A+ Y R+ V CV P+ +++ + AC+
Sbjct: 126 ARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACV-SPDGFSFPCVLKACS 184
Query: 88 SRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVS 147
+ G+ +HG+++R G E + V N L+ +Y KCG + A VF ++R +SW S
Sbjct: 185 ALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTS 244
Query: 148 LLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
++S Y Q G+ + L+IF RK+ V + SVL A + +L+ G IH V K
Sbjct: 245 IISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMG 304
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
LE + + + L +LYAKC + +A F+ ++ P L W+A+I GY + G A EAI+LF
Sbjct: 305 LECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFR 364
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
M S + P +T + + A A + R + I F + V +++D Y+KC
Sbjct: 365 LMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCG 424
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
++ + FD + + DVV W+A++ G+ E+I L M G PN T+ +L
Sbjct: 425 SVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLT 484
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ +E G + G + + +VD+ + G L+ A ++ + VS
Sbjct: 485 ACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVS 544
Query: 448 -WNTML 452
W +L
Sbjct: 545 VWGALL 550
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 143/283 (50%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF +V N L+ +Y K I A +F + +R ++SW+++ISG++Q G P AL F
Sbjct: 203 GFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIF 262
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M + P++ V + A D GK IHG + + GLE + L ++Y KC
Sbjct: 263 SEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKC 322
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A+ F+ + I W +++S Y + G +++F L + + + S +
Sbjct: 323 GHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSI 382
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA +G+L++ + + D V LI+ YAKC +D+A VF I D+
Sbjct: 383 AACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVV 442
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
WSA++ GY G+ E+I LF M +G+ P++VTF +L A
Sbjct: 443 VWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTA 485
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 116/238 (48%), Gaps = 1/238 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L +Y K + A+ F+++ ++I W+A+ISG+ + G E A+ FRLM + P+
Sbjct: 315 LTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPD 374
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
T +++ACA G + + + S + V+ LI+ Y KCG + A+FVFD
Sbjct: 375 SITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFD 434
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+++ + W +++ Y G+ + +F R++GV+ ++ + +L AC G ++
Sbjct: 435 RIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEE 494
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALIGG 252
G + + +E +++L + LD A N+ + P ++ W AL+
Sbjct: 495 GWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSA 552
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S F +VI L+ Y K ++ A+ +FD +P+++V+ WSA++ G+ G ++
Sbjct: 404 SEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIIL 463
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F M + PN T+VG ++AC + G G ++ RM G+E C++++ G+
Sbjct: 464 FHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGR 523
Query: 124 CGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHV 159
G L A FV + +E W +LLS+ C+ HV
Sbjct: 524 AGHLDRAYNFVMNMPIEPGVSVWGALLSA-CKIHRHV 559
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 214/672 (31%), Positives = 369/672 (54%), Gaps = 12/672 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG ++ + L+ + + +++A+ +F + ERN ++ + LI G + E A
Sbjct: 296 VLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEA 355
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACAS----RGDARSGKEIHGRMYRSGL-ELNSHVSN 115
+ F + N T+V +SA A G+E+HG + R+GL +L +SN
Sbjct: 356 VGIF-MGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSN 414
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
L+NMY KCG + A VF R+ +SW +++S Q G + + + R+ ++
Sbjct: 415 GLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISP 474
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
S F+ S L +CA L L G Q+H K L+ D V+ L+ +Y C + +F
Sbjct: 475 SNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIF 534
Query: 236 SNIQLPDLTAWSALIG-GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
+++ D+ +W++++G + E++++F M SGL P++VTF +L A + +
Sbjct: 535 NSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVL 594
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
G+Q+H++++K G V N ++ Y+K ++ + F M D VSWN++I+G
Sbjct: 595 ELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISG 654
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
++ + H E ++ + M+ + T+S +LN + + A+E G + H ++ +S+
Sbjct: 655 YIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESD 714
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
VV+ SAL+DMY+KCGR++ A KVF+ +S KN SWN+M+ GYA+HGLG +ALEI+ MQ
Sbjct: 715 VVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQR 774
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
N P+ TF+ VLSAC H GLV+ G YF M+ DHGI P ++H + V+ L G+
Sbjct: 775 NGACPDHVTFVSVLSACSHAGLVDRGLDYFE-MMEDHGILPHIEHYSCVIDLLGRAGKLL 833
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKD---LVLGRYAAEKILSTDPEDTSAHIMLSN 590
+ E+I P++PN ++WR +L C+ KD + LG+ A+ +L +P++ +++ SN
Sbjct: 834 KIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASN 893
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQ 650
YA W++TAK R M ++KK+ G SW L + +H F + +++E +N
Sbjct: 894 FYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNF 953
Query: 651 LSVHLFDGGYVP 662
L + + GYVP
Sbjct: 954 LIQKIKNAGYVP 965
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 157/578 (27%), Positives = 294/578 (50%), Gaps = 26/578 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G ++ NHL+ +Y K SR+ A+++FD M ERN +SW+ L+SG+ G+ + A
Sbjct: 82 LVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDEA 141
Query: 61 LNYFRLMVCCVLE---PNYYTYVGAVSACASRGD--ARSGKEIHGRMYRSGLELNSHVSN 115
F+ M+ E P +T+ + AC G ++HG + ++ N+ V N
Sbjct: 142 FRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCN 201
Query: 116 CLINMYGKC--GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
LI+MYG C GL AQ VFD + R+ I+W +L+S Y + G V +F+
Sbjct: 202 ALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDS 261
Query: 174 AI----SEFSCASVLGACAVLGNLKVGM--QIHSLVFKCALEFDKFVAMGLINLYAKCEK 227
AI +E + S++ A + L + G+ Q+ + V K D +V L++ +A+
Sbjct: 262 AIELRPNEHTFGSLITATS-LSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGM 320
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
LD A +F N++ + + LI G + + EA+ +F+ S ++ ++ TF +L A
Sbjct: 321 LDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTD-TFVVLLSA 379
Query: 288 FAD--VKET--IGGRQLHSLIIKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEH 342
A+ + E + GR++H I++ G ++N +++ Y+KC ++++ + F +
Sbjct: 380 VAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCAR 439
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS--DIPAIEWGKQ 400
D VSWN +I+ L + E + M+ +G C + ++ I +SS + + G+Q
Sbjct: 440 DRVSWNTIISV-LDQNGFCEGAMMNYCMMRQG-CISPSNFAAISGLSSCASLRLLTAGQQ 497
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML-VGYAQHG 459
HC VK G D + + +ALV MY CG +++ ++F+ ++ ++VSWN+++ V + H
Sbjct: 498 VHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHA 557
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
E++E++S M + + PN TF+ +LSA + ++E G ++++ HG
Sbjct: 558 PTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELG-KQVHAVVLKHGAIEDNAVD 616
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+++ +A G + S + V W ++SG
Sbjct: 617 NALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISG 654
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 159/589 (26%), Positives = 266/589 (45%), Gaps = 59/589 (10%)
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
RG+ + + +H + + GL + +SN L+N+Y K L++A+ VFD LERN++SW L
Sbjct: 69 RGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCL 128
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISE---FSCASVLGACAVLGN--LKVGMQIHSLV 203
+S Y G ++F G S F+ SVL AC G L +Q+H LV
Sbjct: 129 VSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLV 188
Query: 204 FKCALEFDKFVAMGLINLYAKCE-KLDL-ASRVFSNIQLPDLTAWSALIGGYAQLGKACE 261
K + V LI++Y C L L A +VF + DL W+AL+ YA+ G
Sbjct: 189 SKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVS 248
Query: 262 AIDLFVKMFSSG----LMPSEVTFSYVLGAFADVKETIGG-RQLHSLIIKMGFSSFTFVA 316
LF+ M L P+E TF ++ A + + G Q+ + ++K G SS +V
Sbjct: 249 TFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVG 308
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
+ ++ +++ +L+E+ F + E + V+ N LI G + EA+ + +
Sbjct: 309 SALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTR-DSFV 367
Query: 377 PNLYTYSNILNISSD--IP--AIEWGKQTHCCIVKPGF-DSNVVIGSALVDMYAKCGRLN 431
N T+ +L+ ++ IP + G++ H I++ G D + + + LV+MYAKCG ++
Sbjct: 368 VNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAID 427
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
A +VF L +++ VSWNT++ Q+G A+ Y MM++ I P++ I LS+C
Sbjct: 428 KASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCA 487
Query: 492 HIGLVEEG-----------------------------------WHYFNSMIRDHGISPRM 516
+ L+ G W FNSM +H I
Sbjct: 488 SLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMA-EHDIVSWN 546
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
+ +V A ++ + + S + PNKV + LLS L LG+ +L
Sbjct: 547 SIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLK 606
Query: 577 TDP-EDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
ED + L + YA++ D ++ S ++D SW +
Sbjct: 607 HGAIEDNAVDNALMSCYAKSGDMD---SCEQLFSSMSGRRD-AVSWNSM 651
>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 213/641 (33%), Positives = 347/641 (54%), Gaps = 2/641 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF + + L+ MY + + DA+K+FDEM R+++ WS++IS + + G+
Sbjct: 128 ILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREG 187
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M+C + P+ + AC G R K +HG + R G+ + +SN LI M
Sbjct: 188 LEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVM 247
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG L A+ +F+ +R++ W S++S+Y Q L +F+ + S V ++ +
Sbjct: 248 YSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTM 307
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF-VAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL +CA LG LK G +H V + A+ + LI+ Y+ C K+ ++ +I
Sbjct: 308 ISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIG 367
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+ LI YA+ G EA+ F M + G+MP + + + A A G+Q
Sbjct: 368 NENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQ 427
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H ++K GF FV N+++D YSKC + F+++ +V+WN +I G +
Sbjct: 428 IHGHVMKRGFFD-EFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGI 486
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA+ L +M N T+ + + S++ ++ GK H I+ G +++ I +A
Sbjct: 487 SVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTA 546
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMYAKCG L A+KVFD + K++VSW+TM+ + HG A ++ M + IKPN
Sbjct: 547 LVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPN 606
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ TF+ +LSAC H G V+EG YFN+M +GI P ++H AS+V L + G AYE I
Sbjct: 607 EVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEII 666
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
KS +W LL+GC+ + + + Y AE++ +DT + +LSN+YAE W
Sbjct: 667 KSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYTLLSNIYAEGGNWY 726
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQ 640
E+ KVR M+ LKK G S E+ K++ F + +++Q
Sbjct: 727 ESRKVRSKMEGMGLKKVPGYSTVEIDRKIYRFGSGDTSEWQ 767
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 147/570 (25%), Positives = 288/570 (50%), Gaps = 11/570 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISG--FSQIGMPE 58
++ + H N + LL Y + + ++ +F P + +S LI ++ +
Sbjct: 24 LVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNHLFREV 83
Query: 59 VALNYFRLMVCCVLEPN-YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
++L + + L N + Y + A G+ G+++HGR+ +SG + + L
Sbjct: 84 LSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRVIGTSL 143
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+ MYG+ L A+ VFD R+ + W S++S Y + G + GL++F G+
Sbjct: 144 VGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDS 203
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
SV AC +G L++ +H V + + D ++ LI +Y++C L A R+F
Sbjct: 204 VMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFEC 263
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
I + W+++I Y Q EA+D+F+KM S + P++VT VL + A + G
Sbjct: 264 IDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEG 323
Query: 298 RQLHSLIIK--MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
+ +H +++ MG + + ++DFYS C + K + ++VSWN LI+ +
Sbjct: 324 KSVHCFVLRNAMGVTGLD-LGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYA 382
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
EA+ M+ +G P+ ++ ++ ++ S+ +I++G+Q H ++K GF V
Sbjct: 383 REGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEFV 442
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
S L+DMY+KCG + A +F+ + K++V+WN M+ G++Q+G+ EAL ++ M +N+
Sbjct: 443 QNS-LMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNR 501
Query: 476 IKPNDNTFIGVLSACVHIGLVEEG-WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
++ N TF+ + AC ++G +++G W + ++ + +D ++V ++A G +
Sbjct: 502 LEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYID--TALVDMYAKCGDLQT 559
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
A + + S +E + V W +++ H +
Sbjct: 560 AQK-VFDSIVEKSVVSWSTMIAAHGIHGQI 588
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 160/317 (50%), Gaps = 6/317 (1%)
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
C+ L L Q+H+ + +L + + L+ Y++ L + VF PD
Sbjct: 10 TCSTLRRLT---QLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFM 66
Query: 246 WSALIGGYAQLGKACEAIDLF---VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+S LI + E + LF ++M S + V+ A V E I GR+LH
Sbjct: 67 FSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHG 126
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
I+K GF + +++ Y + L ++ K FDEM D+V W+++I+ ++ + Y E
Sbjct: 127 RILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYRE 186
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
+E+ + M+ EG P+ ++ I + K H +++ G + + ++L+
Sbjct: 187 GLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIV 246
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MY++CG L A+++F+ + ++ W +M+ Y Q+ EAL+++ MQ+++++PND T
Sbjct: 247 MYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVT 306
Query: 483 FIGVLSACVHIGLVEEG 499
I VL++C +G ++EG
Sbjct: 307 MISVLNSCARLGRLKEG 323
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/655 (30%), Positives = 343/655 (52%), Gaps = 2/655 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEVALNYFRLMVCCVL 72
+ L+ MYVK + A+++FD M + NV W+ ++ G++++G E +L+ F M +
Sbjct: 354 SKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGI 413
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P+ + + AR G HG + + G V N LI+ Y K ++ A
Sbjct: 414 APDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVL 473
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VF+ +++ISW S++S G + +++F+ G + + SVL ACA
Sbjct: 474 VFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRY 533
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
G +H K L + +A L+++Y+ C +++F ++ ++ +W+A+I
Sbjct: 534 WFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITS 593
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y + G + L +M G+ P + L AFA + G+ +H I+ G
Sbjct: 594 YMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKL 653
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
VAN +++ Y KC +EE+ FD + DV+SWN LI G+ + E+ L DML
Sbjct: 654 LPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLL 713
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+ PN T + IL ++ I ++E G++ H ++ GF + +ALVDMY KCG L
Sbjct: 714 QFR-PNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLV 772
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
AR +FD L+ KNL+SW M+ GY HG G+ A+ ++ M+ + I+P+ +F +L AC H
Sbjct: 773 ARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCH 832
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
GL EG +F +M +++ I P++ H +V L + G + A EFI+S PIEP+ +W
Sbjct: 833 SGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWV 892
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL GC+ HK++ L A+K+ +PE+T +++L+N+YAEA W+ K++ + +
Sbjct: 893 SLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRG 952
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
L+++TG SW E+++K+H F + E ++ ++ + G+ P Y+
Sbjct: 953 LRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYA 1007
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 258/497 (51%), Gaps = 12/497 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ +Y + R+ DA ++FD M R+ ISW+++I G G A++ F M E
Sbjct: 243 NALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTE 302
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL-----ELNSHVSNC-----LINMYGK 123
+ T + + ACA G GK +HG +SGL + S + + L+ MY K
Sbjct: 303 ISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVK 362
Query: 124 CGLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
CG ++SA+ VFDA + ++ W ++ Y + GE L +F+ + G+A E + +
Sbjct: 363 CGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISC 422
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L L + G+ H + K V LI+ YAK + A VF+ + D
Sbjct: 423 LLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQD 482
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+W+++I G + G EAI+LF++M++ G VT VL A A + GR +H
Sbjct: 483 TISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHG 542
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
+K G T +AN +LD YS C + + + F M + +VVSW A+I ++ + + +
Sbjct: 543 YSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDK 602
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
LL++M+ +G P+++ ++ L+ + +++ GK H ++ G + + + +AL++
Sbjct: 603 VAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALME 662
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MY KC + +AR +FD +++K+++SWNT++ GY+++ E+ ++S M + +PN T
Sbjct: 663 MYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLL-QFRPNAVT 721
Query: 483 FIGVLSACVHIGLVEEG 499
+L A I +E G
Sbjct: 722 MTCILPAAASISSLERG 738
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 238/479 (49%), Gaps = 13/479 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPER--NVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
L+L Y+K + +A+ +FD MP + +V W++L+S +++ G + A++ FR M CC
Sbjct: 140 KRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCG 199
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ P+ + + +S G G+ IHG + + GL V+N LI +Y +CG + A
Sbjct: 200 VSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAA 259
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD+ R++ISW S++ G H + +F G IS + SVL ACA LG
Sbjct: 260 RVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLG 319
Query: 192 NLKVGMQIHSLVFKCALEF----------DKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+G +H K L + D + L+ +Y KC + A RVF +
Sbjct: 320 YGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSK 379
Query: 242 -DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+ ++GGYA++G+ E++ LFV+M G+ P E S +L + G
Sbjct: 380 GNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVA 439
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H I+K+GF + V N ++ FY+K ++ +++ F+ M D +SWN++I+G ++
Sbjct: 440 HGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLN 499
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EAIEL M +G + T ++L + G+ H VK G + +AL
Sbjct: 500 SEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANAL 559
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
+DMY+ C ++F + KN+VSW M+ Y + GL + + M + I+P+
Sbjct: 560 LDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPD 618
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 195/388 (50%), Gaps = 5/388 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF N L+ Y K + I DA +F+ MP ++ ISW+++ISG S G+ A
Sbjct: 443 IVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEA 502
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M E + T + + ACA +G+ +HG ++GL + ++N L++M
Sbjct: 503 IELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDM 562
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG--EHVHGLKIFLLSRKSGVAISEF 178
Y C S +F + ++N +SW ++++SY + G + V GL ++ G+ F
Sbjct: 563 YSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMV--LDGIRPDVF 620
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S L A A +LK G +H + +E VA L+ +Y KC ++ A +F +
Sbjct: 621 AVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRV 680
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +W+ LIGGY++ E+ LF M P+ VT + +L A A + GR
Sbjct: 681 TNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGR 739
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H+ ++ GF ++ +N ++D Y KC L + FD + + +++SW +IAG+
Sbjct: 740 EIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHG 799
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNIL 386
AI L + M G P+ ++S IL
Sbjct: 800 FGKHAIALFEQMRGSGIEPDAASFSAIL 827
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN---- 413
C G+ L+ + +G ++ +Y ++ + + ++E K+ H I +
Sbjct: 77 CQAGDLAGALRLLGSDGGV-DVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKG 135
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSK--NLVSWNTMLVGYAQHGLGREALEIYSMM 471
V+G LV Y KCG L +AR VFD + + ++ W +++ YA+ G +EA+ ++ M
Sbjct: 136 SVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQM 195
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
Q + P+ + VL +G + EG + ++ G+ +++ +++ G+
Sbjct: 196 QCCGVSPDAHAVSCVLKCVSSLGSLTEG-EVIHGLLEKLGLGQACAVANALIAVYSRCGR 254
Query: 532 TRRAYEFIKSSPIEPNKVV-WRCLLSGC 558
A S + P + W ++ GC
Sbjct: 255 MEDAARVFDS--MHPRDAISWNSMIGGC 280
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 217/670 (32%), Positives = 346/670 (51%), Gaps = 97/670 (14%)
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL------------ 138
D +GK IH R+ ++GL L + N L+N Y K G + A VFD
Sbjct: 28 DPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILS 87
Query: 139 -------------------ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
E +S+SW +++ Y Q G+ + + +F V ++F+
Sbjct: 88 GYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFT 147
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK------------ 227
+VL +CA + L +G ++HS V K L VA L+N+YAK
Sbjct: 148 LTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMK 207
Query: 228 -------------------LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+DLA F + D+ +W+A+I GY Q G EA+D+F K
Sbjct: 208 LKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSK 267
Query: 269 MF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC- 326
M S P + T + L A A+++ G+Q+H+ II+ F +F V N ++ YSK
Sbjct: 268 MLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSG 327
Query: 327 ------ELLEESL--------------------------KTFDEMDEHDVVSWNALIAGH 354
+++E+S+ + FD + DVV+W A+I G+
Sbjct: 328 GVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGY 387
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ + +A+EL + M+ EG PN YT + +L++SS + +++ G+Q H + G S+V
Sbjct: 388 VQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSV 447
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ +AL+ MYAK G +NDAR VF+ + ++ ++W +M++ AQHGLG EAL ++ M E
Sbjct: 448 SVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLE 507
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
N IKP+ T++GVLSAC H+GLVE+G Y+N M H I P H A ++ LF G +
Sbjct: 508 NGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQ 567
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A+ FI++ PIEP+ + W LL+ CK HK++ L AAE++L +PE++ A+ L+NVY+
Sbjct: 568 EAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYS 627
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W+ A +RK MK+K +KKD G SW +++NK+H F Q ++E+M ++
Sbjct: 628 ACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWK 687
Query: 654 HLFDGGYVPD 663
+ G+VPD
Sbjct: 688 EIKKMGFVPD 697
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 140/529 (26%), Positives = 253/529 (47%), Gaps = 90/529 (17%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V ++N +L Y K R+ +A ++F+EMPE + +SW+A+I G++Q+G E A+ FR MV
Sbjct: 78 SVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMV 137
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK----- 123
+ P +T +++CA+ G+++H + + GL V+N L+NMY K
Sbjct: 138 SDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPV 197
Query: 124 --------------------------CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
GL+ AQ F+ +ER+ +SW +++S Y Q G
Sbjct: 198 TAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGF 257
Query: 158 HVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
L IF + S +F+ AS L ACA L NLK+G QIH+ + + EFD F A+
Sbjct: 258 DREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRT--EFDTFGAV 315
Query: 217 G--LINLYAKCEKLDLAS---------------------------------RVFSNIQLP 241
G LI++Y+K +++A R+F ++++
Sbjct: 316 GNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVR 375
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ AW+A+I GY Q G +A++LF M G P+ T + +L + + GRQ+H
Sbjct: 376 DVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIH 435
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHY 360
+ + G +S V+N ++ Y+K + ++ F+ + + D ++W ++I +A +
Sbjct: 436 ASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMI---IALAQH 492
Query: 361 G---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK-------QTHCCIVKPGF 410
G EA+ L + ML G P+ TY +L+ + + +E G+ H I P
Sbjct: 493 GLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSH 552
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
+ ++D++ + G L +A +++ ++++W ++L H
Sbjct: 553 ------YACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVH 595
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 150/334 (44%), Gaps = 73/334 (21%)
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
K+ G+ +H+ IIK G F+ N +++FY+K + ++ + FDEM V SWN ++
Sbjct: 27 KDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIIL 86
Query: 352 AGH-----LASCH--------------------------YGEAIELLKDMLFEGHCPNLY 380
+G+ L H + AI + ++M+ + P +
Sbjct: 87 SGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQF 146
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD-- 438
T +N+L + + + G++ H +VK G S + + ++L++MYAK G A+ VFD
Sbjct: 147 TLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRM 206
Query: 439 --------------HLSS---------------KNLVSWNTMLVGYAQHGLGREALEIYS 469
H+ S +++VSWN M+ GY QHG REAL+I+S
Sbjct: 207 KLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFS 266
Query: 470 -MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV----VH 524
M+ ++ KP+ T LSAC ++ ++ G I H I D +V +
Sbjct: 267 KMLMDSSSKPDKFTLASALSACANLENLKLG-----KQIHAHIIRTEFDTFGAVGNALIS 321
Query: 525 LFACRGQTRRAYEFIKSSPIEPNKVV-WRCLLSG 557
+++ G A + I+ S I V+ + LL G
Sbjct: 322 MYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDG 355
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 108/198 (54%), Gaps = 13/198 (6%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQIGMPEVALN 62
SG +V N L+ MY K INDA+ +F+ + +R+ I+W+++I +Q G+ E AL
Sbjct: 441 SGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALT 500
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG--LELNSHVSNCLINM 120
F M+ ++P++ TYVG +SAC G G+ + M + + SH + C+I++
Sbjct: 501 LFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYA-CMIDL 559
Query: 121 YGKCGLLSSAQ-FVFDASLERNSISWVSLLSSYCQCGEHVH-----GLKIFLLSRKSGVA 174
+G+ GLL A F+ + +E + I+W SLL+S C+ ++V ++ L+ ++ A
Sbjct: 560 FGRAGLLQEAHAFIENMPIEPDVIAWGSLLAS-CKVHKNVELAEVAAERLLLIEPENSGA 618
Query: 175 ISEFSCASVLGACAVLGN 192
S + A+V AC N
Sbjct: 619 YS--ALANVYSACGQWEN 634
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 208/657 (31%), Positives = 356/657 (54%), Gaps = 9/657 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G NV + L+ +Y K +DA+ +FD E+N++ W+A+++GF Q +PE A+
Sbjct: 362 VMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAI 421
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M+ L+ + +T+V + AC GK++H ++ ++++ V+N ++MY
Sbjct: 422 RMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMY 481
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G + A+ +F ++SISW +L Q E + + R G+ + S +
Sbjct: 482 SKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFS 541
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ + AC+ + + G QIH L K + + V LI+LY+K ++ + ++F+ +
Sbjct: 542 TAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDAS 601
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ +ALI G+ Q EAI LF ++ GL PS VTFS +L + + G+Q+H
Sbjct: 602 SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVH 661
Query: 302 SLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLASCH 359
+K G T + ++ Y K ++LE++ K EM +H ++ W A+I+G+ A
Sbjct: 662 CYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGY-AQNG 720
Query: 360 YGEAIELLKDMLFEGHC---PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
YG+ L HC + T++++L SD+ A GK+ H I K GF S
Sbjct: 721 YGD--HSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETA 778
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
SAL+DMY+KCG + + + F L +K +++ WN+M+VG+A++G EAL ++ M+E +
Sbjct: 779 TSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQ 838
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
IKP++ TF+GVL AC H GL+ EG H+F SM + +G++PR+DH A + L G + A
Sbjct: 839 IKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEA 898
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
E I P P+ VVW L+ C+ HKD G+ AA K++ +P+ +S +++LS+++A
Sbjct: 899 QEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAAT 958
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
W E R+ M+EK + K GCSW + NK F + ++E++ L+
Sbjct: 959 GNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLT 1015
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 165/559 (29%), Positives = 287/559 (51%), Gaps = 3/559 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M G P+ +T ++ R++ A L +MP + ++W+A+ISG +Q G+
Sbjct: 260 MDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNV 319
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L ++ M L P T+ +SA A+ G+++H GL+ N V + LIN+
Sbjct: 320 LGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINL 379
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG S A+ VFD S E+N + W ++L+ + Q +++F + + EF+
Sbjct: 380 YAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTF 439
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+LGAC L + +G Q+H + K ++ FVA +++Y+K + A +FS I
Sbjct: 440 VSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY 499
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +W+AL G AQ + EA+ + +M G+ P +V+FS + A ++++ T G+Q+
Sbjct: 500 KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI 559
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L IK G S V ++++D YSK +E S K F ++D +V NALIAG + + +
Sbjct: 560 HCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNE 619
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSA 419
EAI+L + +L +G P+ T+S+IL+ S GKQ HC +K G + ++G +
Sbjct: 620 DEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVS 679
Query: 420 LVDMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L +Y K L DA K+ + KNL W ++ GYAQ+G G +L + M+ ++
Sbjct: 680 LAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRS 739
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
++ TF VL AC + +G + +I G ++++ +++ G ++E
Sbjct: 740 DEATFASVLKACSDVTAFADG-KEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEA 798
Query: 539 IKSSPIEPNKVVWRCLLSG 557
K + + + W ++ G
Sbjct: 799 FKELKNKQDIMPWNSMIVG 817
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 156/634 (24%), Positives = 291/634 (45%), Gaps = 73/634 (11%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVL- 72
+ L+ +Y K R+ A ER + S+L+S ++ G P L FR + C
Sbjct: 105 DSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGG 164
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P+ + +SAC+ G G+++H + +SG + L++MY KCG + +A+
Sbjct: 165 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 224
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VFD ++I W S+++ Y + G + L +F K G A
Sbjct: 225 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP----------------- 267
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
D+ + +I+ A +LD A+ + + P AW+A+I G
Sbjct: 268 ------------------DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISG 309
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
+AQ G + L+ M S GL P+ TF+ +L A A++K + G+Q+H+ + G +
Sbjct: 310 HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN 369
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
FV +++++ Y+KC ++ FD E ++V WNA++ G + + EAI + + M+
Sbjct: 370 VFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 429
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+ +T+ +IL + + + GKQ HC +K D ++ + +A +DMY+K G + D
Sbjct: 430 YTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGD 489
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A+ +F + K+ +SWN + VG AQ+ EA+ + M+ + I P+D +F ++AC +
Sbjct: 490 AKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSN 549
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ---TRRAYEFIKSSPI----- 544
I E G I+ +GI +S++ L++ G +R+ + + +S I
Sbjct: 550 IRATETGKQIHCLAIK-YGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINA 608
Query: 545 --------------------------EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD 578
+P+ V + +LSGC + +G+ L +
Sbjct: 609 LIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSG 668
Query: 579 P--EDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
+DT + L+ +Y ++ M ++ K+ M +
Sbjct: 669 VLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD 702
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 234/490 (47%), Gaps = 35/490 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF +V L+ MY K + +A+++FD + + I WS++I+ + ++G + A
Sbjct: 194 VVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEA 253
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M P+ T V +S AS G
Sbjct: 254 LALFSRMDKMGSAPDQVTLVTIISTLASSGR----------------------------- 284
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
L A + ++++W +++S + Q G + L ++ R G+ + +
Sbjct: 285 ------LDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTF 338
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L A A + G Q+H+ L+ + FV LINLYAKC A VF
Sbjct: 339 ASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCE 398
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+A++ G+ Q EAI +F M L E TF +LGA + G+Q+
Sbjct: 399 KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQV 458
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + IK FVAN LD YSK + ++ F + D +SWNAL G +
Sbjct: 459 HCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEE 518
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ +LK M G P+ ++S +N S+I A E GKQ HC +K G SN +GS+L
Sbjct: 519 EEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSL 578
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+D+Y+K G + +RK+F + + ++V N ++ G+ Q+ EA++++ + ++ +KP+
Sbjct: 579 IDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSS 638
Query: 481 NTFIGVLSAC 490
TF +LS C
Sbjct: 639 VTFSSILSGC 648
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 196/403 (48%), Gaps = 36/403 (8%)
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
+++ + +HGR+ R G L + + L+ +Y K G + A + ER S + SLLS
Sbjct: 82 SQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSC 141
Query: 152 YCQCGEHVHGLKIFLLSR-KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF 210
+ + G L F R +G +F A VL AC+ +G L G Q+H V K
Sbjct: 142 HARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSS 201
Query: 211 DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF 270
F L+++YAKC + A RVF I PD WS++I Y ++G EA+ LF +M
Sbjct: 202 SVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMD 261
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
G P +VT ++ A GR L+
Sbjct: 262 KMGSAPDQVTLVTIISTLAS-----SGR------------------------------LD 286
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
+ +M V+WNA+I+GH S + L KDM G P T++++L+ ++
Sbjct: 287 HATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAA 346
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
++ A G+Q H V G D+NV +GS+L+++YAKCG +DA+ VFD KN+V WN
Sbjct: 347 NMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNA 406
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
ML G+ Q+ L EA+ ++ M ++ ++ TF+ +L AC ++
Sbjct: 407 MLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYL 449
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 136/304 (44%), Gaps = 45/304 (14%)
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
R LH I++ G + +++++ Y K + + E + ++L++ H S
Sbjct: 86 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145
Query: 358 CHYGEAIELLKDM-LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
G+ + + + G P+ + + +L+ S + + +G+Q HC +VK GF S+V
Sbjct: 146 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 205
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ALVDMYAKCG + +AR+VFD ++ + + W++M+ Y + G +EAL ++S M +
Sbjct: 206 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 265
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P+ T + ++S G R+DH A
Sbjct: 266 APDQVTLVTIISTLASSG--------------------RLDH----------------AT 289
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDL---VLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
+K P P+ V W ++SG L VLG Y + P ++ MLS A
Sbjct: 290 ALLKKMPT-PSTVAWNAVISG-HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLS---A 344
Query: 594 EANM 597
ANM
Sbjct: 345 AANM 348
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 208/657 (31%), Positives = 356/657 (54%), Gaps = 9/657 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G NV + L+ +Y K +DA+ +FD E+N++ W+A+++GF Q +PE A+
Sbjct: 352 VMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAI 411
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M+ L+ + +T+V + AC GK++H ++ ++++ V+N ++MY
Sbjct: 412 RMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMY 471
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G + A+ +F ++SISW +L Q E + + R G+ + S +
Sbjct: 472 SKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFS 531
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ + AC+ + + G QIH L K + + V LI+LY+K ++ + ++F+ +
Sbjct: 532 TAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDAS 591
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ +ALI G+ Q EAI LF ++ GL PS VTFS +L + + G+Q+H
Sbjct: 592 SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVH 651
Query: 302 SLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLASCH 359
+K G T + ++ Y K ++LE++ K EM +H ++ W A+I+G+ A
Sbjct: 652 CYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGY-AQNG 710
Query: 360 YGEAIELLKDMLFEGHC---PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
YG+ L HC + T++++L SD+ A GK+ H I K GF S
Sbjct: 711 YGD--HSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETA 768
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
SAL+DMY+KCG + + + F L +K +++ WN+M+VG+A++G EAL ++ M+E +
Sbjct: 769 TSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQ 828
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
IKP++ TF+GVL AC H GL+ EG H+F SM + +G++PR+DH A + L G + A
Sbjct: 829 IKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEA 888
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
E I P P+ VVW L+ C+ HKD G+ AA K++ +P+ +S +++LS+++A
Sbjct: 889 QEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAAT 948
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
W E R+ M+EK + K GCSW + NK F + ++E++ L+
Sbjct: 949 GNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLT 1005
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 164/555 (29%), Positives = 286/555 (51%), Gaps = 3/555 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G P+ +T ++ R++ A L +MP + ++W+A+ISG +Q G+ L +
Sbjct: 254 GSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY 313
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M L P T+ +SA A+ G+++H GL+ N V + LIN+Y KC
Sbjct: 314 KDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKC 373
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G S A+ VFD S E+N + W ++L+ + Q +++F + + EF+ S+L
Sbjct: 374 GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSIL 433
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
GAC L + +G Q+H + K ++ FVA +++Y+K + A +FS I D
Sbjct: 434 GACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSI 493
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+AL G AQ + EA+ + +M G+ P +V+FS + A ++++ T G+Q+H L
Sbjct: 494 SWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLA 553
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK G S V ++++D YSK +E S K F ++D +V NALIAG + + + EAI
Sbjct: 554 IKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAI 613
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSALVDM 423
+L + +L +G P+ T+S+IL+ S GKQ HC +K G + ++G +L +
Sbjct: 614 QLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGI 673
Query: 424 YAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
Y K L DA K+ + KNL W ++ GYAQ+G G +L + M+ ++ ++ T
Sbjct: 674 YLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEAT 733
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F VL AC + +G + +I G ++++ +++ G ++E K
Sbjct: 734 FASVLKACSDVTAFADG-KEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKEL 792
Query: 543 PIEPNKVVWRCLLSG 557
+ + + W ++ G
Sbjct: 793 KNKQDIMPWNSMIVG 807
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 156/634 (24%), Positives = 291/634 (45%), Gaps = 73/634 (11%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVL- 72
+ L+ +Y K R+ A ER + S+L+S ++ G P L FR + C
Sbjct: 95 DSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGG 154
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P+ + +SAC+ G G+++H + +SG + L++MY KCG + +A+
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VFD ++I W S+++ Y + G + L +F K G A
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP----------------- 257
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
D+ + +I+ A +LD A+ + + P AW+A+I G
Sbjct: 258 ------------------DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISG 299
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
+AQ G + L+ M S GL P+ TF+ +L A A++K + G+Q+H+ + G +
Sbjct: 300 HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN 359
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
FV +++++ Y+KC ++ FD E ++V WNA++ G + + EAI + + M+
Sbjct: 360 VFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 419
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+ +T+ +IL + + + GKQ HC +K D ++ + +A +DMY+K G + D
Sbjct: 420 YTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGD 479
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A+ +F + K+ +SWN + VG AQ+ EA+ + M+ + I P+D +F ++AC +
Sbjct: 480 AKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSN 539
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ---TRRAYEFIKSSPI----- 544
I E G I+ +GI +S++ L++ G +R+ + + +S I
Sbjct: 540 IRATETGKQIHCLAIK-YGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINA 598
Query: 545 --------------------------EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD 578
+P+ V + +LSGC + +G+ L +
Sbjct: 599 LIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSG 658
Query: 579 P--EDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
+DT + L+ +Y ++ M ++ K+ M +
Sbjct: 659 VLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD 692
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 234/490 (47%), Gaps = 35/490 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF +V L+ MY K + +A+++FD + + I WS++I+ + ++G + A
Sbjct: 184 VVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEA 243
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M P+ T V +S AS G
Sbjct: 244 LALFSRMDKMGSAPDQVTLVTIISTLASSGR----------------------------- 274
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
L A + ++++W +++S + Q G + L ++ R G+ + +
Sbjct: 275 ------LDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTF 328
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L A A + G Q+H+ L+ + FV LINLYAKC A VF
Sbjct: 329 ASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCE 388
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+A++ G+ Q EAI +F M L E TF +LGA + G+Q+
Sbjct: 389 KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQV 448
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + IK FVAN LD YSK + ++ F + D +SWNAL G +
Sbjct: 449 HCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEE 508
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ +LK M G P+ ++S +N S+I A E GKQ HC +K G SN +GS+L
Sbjct: 509 EEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSL 568
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+D+Y+K G + +RK+F + + ++V N ++ G+ Q+ EA++++ + ++ +KP+
Sbjct: 569 IDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSS 628
Query: 481 NTFIGVLSAC 490
TF +LS C
Sbjct: 629 VTFSSILSGC 638
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 193/399 (48%), Gaps = 36/399 (9%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
+ +HGR+ R G L + + L+ +Y K G + A + ER S + SLLS + +
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 156 GEHVHGLKIFLLSR-KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
G L F R +G +F A VL AC+ +G L G Q+H V K F
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
L+++YAKC + A RVF I PD WS++I Y ++G EA+ LF +M G
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 255
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
P +VT ++ A GR L+ +
Sbjct: 256 APDQVTLVTIISTLAS-----SGR------------------------------LDHATA 280
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
+M V+WNA+I+GH S + L KDM G P T++++L+ ++++ A
Sbjct: 281 LLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKA 340
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
G+Q H V G D+NV +GS+L+++YAKCG +DA+ VFD KN+V WN ML G
Sbjct: 341 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 400
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+ Q+ L EA+ ++ M ++ ++ TF+ +L AC ++
Sbjct: 401 FVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYL 439
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 136/304 (44%), Gaps = 45/304 (14%)
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
R LH I++ G + +++++ Y K + + E + ++L++ H S
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 358 CHYGEAIELLKDM-LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
G+ + + + G P+ + + +L+ S + + +G+Q HC +VK GF S+V
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ALVDMYAKCG + +AR+VFD ++ + + W++M+ Y + G +EAL ++S M +
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 255
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P+ T + ++S G R+DH A
Sbjct: 256 APDQVTLVTIISTLASSG--------------------RLDH----------------AT 279
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDL---VLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
+K P P+ V W ++SG L VLG Y + P ++ MLS A
Sbjct: 280 ALLKKMPT-PSTVAWNAVISG-HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLS---A 334
Query: 594 EANM 597
ANM
Sbjct: 335 AANM 338
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 191/554 (34%), Positives = 303/554 (54%), Gaps = 2/554 (0%)
Query: 111 SHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK 170
S ++ LI Y GL+ A+ +FD ER+ ++W +++ Y C H H +F
Sbjct: 43 SVLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMN 102
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC-EKLD 229
+ + F+ +SVL AC + L G +H L K L+ +V L+++YA C +D
Sbjct: 103 EELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMD 162
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A VF I L + +W+ LI GY + +F +M + + +FS + A
Sbjct: 163 DACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACT 222
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ G QLH+ + K GF S V N++LD Y +C E+ + F EM++ D+++WN
Sbjct: 223 SIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNT 282
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
LIAG+ S + E++ + M EG PN +T+++I+ + + + G+Q H I++ G
Sbjct: 283 LIAGYERS-NPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRG 341
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
D N+ + +AL+DMY+KCG + D+ +VF +S ++LVSW M++GY HG G EA+E++
Sbjct: 342 LDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFD 401
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M + I+P+ F+ +LSAC H GLV+EG YF M+ D+ ISP + VV L
Sbjct: 402 KMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRA 461
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
G+ AYE I+S P +P++ VW L CK H LG+ AA +IL P ++MLS
Sbjct: 462 GKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLS 521
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMN 649
N+YA W E A++RK+MK KK+TG SW E+ N ++ F + +++V+
Sbjct: 522 NIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLE 581
Query: 650 QLSVHLFDGGYVPD 663
L H+ + GYVPD
Sbjct: 582 NLIGHMKESGYVPD 595
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 220/441 (49%), Gaps = 10/441 (2%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P+V+ L+ Y I +A+ LFDEMPER+V++W+ +I+G++ A F M
Sbjct: 42 PSVLATT-LIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEM 100
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL- 126
+ L+PN +T + AC G+ +HG + GL+ +V N L++MY C +
Sbjct: 101 MNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVS 160
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ A VF +N +SW +L++ Y + GL++F V ++ FS + + A
Sbjct: 161 MDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRA 220
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
C +G+ G Q+H+ V K E + V ++++Y +C A+R F + DL W
Sbjct: 221 CTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITW 280
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ LI GY + E++ +F M S G P+ TF+ ++ A A + G+Q+H II+
Sbjct: 281 NTLIAGYER-SNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIR 339
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G ++N ++D YSKC + +S + F M D+VSW A++ G+ + EA+EL
Sbjct: 340 RGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVEL 399
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV----IGSALVD 422
M+ G P+ + IL+ S ++ G + +V D N+ I +VD
Sbjct: 400 FDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVG---DYNISPDQEIYGCVVD 456
Query: 423 MYAKCGRLNDARKVFDHLSSK 443
+ + G++ +A ++ + + K
Sbjct: 457 LLGRAGKVEEAYELIESMPFK 477
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 171/354 (48%), Gaps = 4/354 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFS-RINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
I G + N L+ MY ++DA +F + +N +SW+ LI+G++
Sbjct: 136 IKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGG 195
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M+ +E N +++ AV AC S G G+++H + + G E N V N +++M
Sbjct: 196 LRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDM 255
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +C S A F +R+ I+W +L++ Y + L +F + G + + F+
Sbjct: 256 YCRCSCFSEANRYFYEMNQRDLITWNTLIAGY-ERSNPTESLYVFSMMESEGFSPNCFTF 314
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S++ ACA L L G QIH + + L+ + ++ LI++Y+KC + + +VF +
Sbjct: 315 TSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSR 374
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL +W+A++ GY G EA++LF KM SG+ P V F +L A + G +
Sbjct: 375 RDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRY 434
Query: 301 HSLII-KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIA 352
L++ S + V+D + +EE+ + + M + D W +
Sbjct: 435 FKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLG 488
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 144/284 (50%), Gaps = 10/284 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N+ N +L MY + S ++A + F EM +R++I+W+ LI+G+ + P +L F
Sbjct: 241 GFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSN-PTESLYVF 299
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+M PN +T+ ++ACA+ G++IHGR+ R GL+ N +SN LI+MY KC
Sbjct: 300 SMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKC 359
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G ++ + VF R+ +SW +++ Y G +++F +SG+ ++L
Sbjct: 360 GNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAIL 419
Query: 185 GACAVLGNLKVGMQIHSL-VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PD 242
AC+ G + G++ L V + D+ + +++L + K++ A + ++ PD
Sbjct: 420 SACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPD 479
Query: 243 LTAWSALIGG-----YAQLGK--ACEAIDLFVKMFSSGLMPSEV 279
W +G + LGK A +DL M + +M S +
Sbjct: 480 ECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNI 523
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 197/596 (33%), Positives = 324/596 (54%), Gaps = 13/596 (2%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
+ A A R G ++HG + + G ++ + N LI+MY KCG L A VF +RN
Sbjct: 224 LRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNV 283
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRK-SGVAISEFSCASVLGACAVLGNLKVGMQIHS 201
+SW +L+ + Q G+ L++ R S A +E++ ++ L AC V ++ G+ IH
Sbjct: 284 VSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHG 343
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALIGGYAQLGKAC 260
L + E VA L+ LY+K ++ A RVF L L W+A+I GYA G
Sbjct: 344 LCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGR 403
Query: 261 EAIDLFVKMFSSGL------MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS--SF 312
+A+ +F +M P E TF+ +L A + G Q+H+ + GFS S
Sbjct: 404 DALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASN 463
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+A ++D Y KC L +++ F+ ++ + + W ++ GH EA+EL +
Sbjct: 464 AILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWR 523
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
G + + S+I+ + +D +E G+Q HC VK ++V G+++VDMY KCG ++
Sbjct: 524 SGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDE 583
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A ++F + ++N+VSW TM+ G +HGLGREA+ ++ M+ ++P++ T++ +LSAC H
Sbjct: 584 AERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSH 643
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
GLV+E YF+ + RD + P+ +H A +V L G+ R A + I++ P+EP VW+
Sbjct: 644 AGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQ 703
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LLS C+ HKD+ +GR A + +L+ D ++ ++ LSNV+AEA W E KVR M+ +
Sbjct: 704 TLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRRG 763
Query: 613 LKKDTGCSWTELQNKMHYF--STSRFAQFQGIDLHEVMNQLSVHLFDG-GYVPDPI 665
LKK GCSW E+ ++H+F A Q D+ V+ + + + GY D +
Sbjct: 764 LKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVREQLGYCADDV 819
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 235/485 (48%), Gaps = 29/485 (5%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + + N+L+ MY K ++ A ++F M +RNV+SW+AL+ GF Q G L
Sbjct: 247 GFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLL 306
Query: 65 -RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+ PN YT ++ AC D +G IHG R+G E + V++ L+ +Y K
Sbjct: 307 GEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSK 366
Query: 124 CGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI------- 175
G + A+ VFD A L R +W +++S Y G HG L+ R+
Sbjct: 367 GGRIGDARRVFDCAGLGRGLATWNAMISGYAHAG---HGRDALLVFREMRRRRRRHEDQH 423
Query: 176 --SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF--DKFVAMGLINLYAKCEKLDLA 231
EF+ AS+L AC LG + G Q+H+ + + +A L+++Y KC +L +A
Sbjct: 424 QPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVA 483
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+VF ++ + W+ ++ G+AQ G+ EA++LF + + SG S ++G AD
Sbjct: 484 MQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADF 543
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
GRQ+H +K + N+++D Y KC L +E+ + F E+ +VVSW +I
Sbjct: 544 ALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMI 603
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----V 406
G EA+ + ++M G P+ TY +L+ S ++ ++ CI V
Sbjct: 604 NGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTV 663
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQH---GLGR 462
+P + + +VD+ + G L +AR + + + V W T+L H +GR
Sbjct: 664 RPKAEHY----ACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGR 719
Query: 463 EALEI 467
EA ++
Sbjct: 720 EAGDV 724
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 219/441 (49%), Gaps = 27/441 (6%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L A A +L+ G+Q+H + K D + LI++YAKC +LD+A VF ++
Sbjct: 221 ADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRD 280
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+AL+ G+ Q G A + L +M +S P+E T S L A ++ G
Sbjct: 281 RNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVG 340
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASC 358
+H L ++ G+ VA++++ YSK + ++ + FD + +WNA+I+G+ +
Sbjct: 341 IHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAG 400
Query: 359 HYGEAIELLKDMLF------EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD- 411
H +A+ + ++M + H P+ +T++++L + A G Q H + GF
Sbjct: 401 HGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFST 460
Query: 412 -SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
SN ++ ALVDMY KCGRL A +VF+ L KN + W T++VG+AQ G EALE++
Sbjct: 461 ASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRR 520
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI-SPRMDHIA---SVVHLF 526
+ + + + ++ LVE+G + +G+ SP ++ S+V ++
Sbjct: 521 FWRSGARADAHVLSSIVGVLADFALVEQG-----RQVHCYGVKSPAGTDVSAGNSIVDMY 575
Query: 527 ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA---EKILSTDPE-DT 582
G A + P N V W +++G H LGR A E++ + E D
Sbjct: 576 LKCGLPDEAERMFREIPAR-NVVSWTTMINGLGKHG---LGREAVAMFEEMRAGGVEPDE 631
Query: 583 SAHIMLSNVYAEANMWDETAK 603
++ L + + A + DE +
Sbjct: 632 VTYLALLSACSHAGLVDECRR 652
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 150/295 (50%), Gaps = 9/295 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFD-EMPERNVISWSALISGFSQIGMPEVA 60
+ +G+ + + + L+L+Y K RI DA+++FD R + +W+A+ISG++ G A
Sbjct: 346 VRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDA 405
Query: 61 LNYFRLMVCCVL------EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL--NSH 112
L FR M +P+ +T+ + AC G R G ++H M SG N+
Sbjct: 406 LLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAI 465
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
++ L++MY KCG L A VF+ +N+I W +++ + Q G+ + L++F +SG
Sbjct: 466 LAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSG 525
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+S++G A ++ G Q+H K D ++++Y KC D A
Sbjct: 526 ARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAE 585
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
R+F I ++ +W+ +I G + G EA+ +F +M + G+ P EVT+ +L A
Sbjct: 586 RMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSA 640
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 124/245 (50%), Gaps = 8/245 (3%)
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
F + M + +L A A GG QLH + K+GF S T + N ++D Y+KC L
Sbjct: 209 FPTNPMERRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGEL 268
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH-CPNLYTYSNILNI 388
+ + + F M + +VVSW AL+ G L + LL +M PN YT S L
Sbjct: 269 DMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKA 328
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVS 447
+ G H V+ G++ + V+ S+LV +Y+K GR+ DAR+VFD + L +
Sbjct: 329 CCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLAT 388
Query: 448 WNTMLVGYAQHGLGREALEIYSMM------QENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
WN M+ GYA G GR+AL ++ M E++ +P++ TF +L AC +G EG
Sbjct: 389 WNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQ 448
Query: 502 YFNSM 506
+M
Sbjct: 449 VHAAM 453
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 318/594 (53%), Gaps = 2/594 (0%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
++ N T++ +++ R GK IH + S L+ V+ L+N Y KCG L+ A+
Sbjct: 6 VKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDAR 65
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD R+ +W S++S+Y IF + G + S+L AC
Sbjct: 66 KVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPE 125
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
NL+ G + + + + E D FV LI +YA+C + A++VF ++ +L WSA+I
Sbjct: 126 NLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIIT 185
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
+A G EA+ F M G++P+ VTF +L F ++H LI + G
Sbjct: 186 AFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDD 245
Query: 312 FTFVANTVLDFYSKCEL--LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
T ++N +++ Y +CE L+ + EMDE + +WN LI G+ EA+E +
Sbjct: 246 TTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQR 305
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
+ E + T+ ++LN + ++ GK H V+ G DS+V++ +AL +MY+KCG
Sbjct: 306 LQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGS 365
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ +AR++FD + ++ VSWN ML YAQHG E L++ M++ +K N TF+ VLS+
Sbjct: 366 MENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSS 425
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C H GL+ EG YF+S+ D GI + +H +V L G+ + A ++I P EP V
Sbjct: 426 CSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIV 485
Query: 550 VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK 609
W LL C+ HKDL G+ AA K+L DP ++SA ++LSN+Y+E W AK+R+ M
Sbjct: 486 TWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMA 545
Query: 610 EKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ +KK G S +++NK+H F + + ++++ + +L + + GYVPD
Sbjct: 546 SRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPD 599
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 234/488 (47%), Gaps = 14/488 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V L+ Y K + DA+K+FD MP R+V +W+++IS +S A F+ M
Sbjct: 44 DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 103
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ T++ + AC + + + GK + + + EL+ V LI MY +C
Sbjct: 104 HEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPE 163
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+A VF ++N I+W ++++++ G L+ F + ++ G+ + + S+L
Sbjct: 164 NAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFT 223
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE--KLDLASRVFSNIQLPDLTAW 246
L+ +IH L+ + L+ ++ L+N+Y +CE +LD+A + + +TAW
Sbjct: 224 TPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAW 283
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ LI GY G++ EA++ + ++ + +VTF VL A G+ +HS ++
Sbjct: 284 NVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVE 343
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G S V N + + YSKC +E + + FD M VSWN ++ + E ++L
Sbjct: 344 CGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKL 403
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA----LVD 422
++ M EG N T+ ++L+ S I G Q + G D + + + LVD
Sbjct: 404 IRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSL---GHDRGIEVKTEHYGCLVD 460
Query: 423 MYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH-GLGREALEIYSMMQENKIKPND 480
+ + G+L +A K + S+ +V+W ++L H L R L +++ + P +
Sbjct: 461 LLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLE---LDPGN 517
Query: 481 NTFIGVLS 488
++ VLS
Sbjct: 518 SSASVVLS 525
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 182/396 (45%), Gaps = 12/396 (3%)
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
GV + + +VL + L+ G IHS V + D FV L+N Y KC L A
Sbjct: 5 GVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDA 64
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+VF + + W+++I Y+ ++ EA +F +M G VTF +L A +
Sbjct: 65 RKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNP 124
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
+ G+ + I + F FV ++ Y++C E + + F M + ++++W+A+I
Sbjct: 125 ENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAII 184
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
H GEA+ + M EG PN T+ ++LN + +E + H I + G D
Sbjct: 185 TAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLD 244
Query: 412 SNVVIGSALVDMYAKC--GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ +ALV++Y +C G L+ A + + + + +WN ++ GY HG REALE Y
Sbjct: 245 DTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQ 304
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA----SVVHL 525
+Q I + TFI VL+AC + EG MI + + +D ++ ++
Sbjct: 305 RLQLEAIPVDKVTFISVLNACTSSTSLAEG-----KMIHSNAVECGLDSDVIVKNALTNM 359
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++ G A S PI + V W +L H
Sbjct: 360 YSKCGSMENARRIFDSMPIR-SAVSWNGMLQAYAQH 394
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 172/354 (48%), Gaps = 4/354 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+ F ++ L+ MY + +A ++F M ++N+I+WSA+I+ F+ G AL Y
Sbjct: 140 TSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRY 199
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
FR+M + PN T++ ++ + IH + GL+ + +SN L+N+YG+
Sbjct: 200 FRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGR 259
Query: 124 C--GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
C G L A+ + E+ +W L++ Y G L+ + + + + + +
Sbjct: 260 CETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFI 319
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SVL AC +L G IHS +C L+ D V L N+Y+KC ++ A R+F ++ +
Sbjct: 320 SVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIR 379
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-L 300
+W+ ++ YAQ G++ E + L KM G+ + +TF VL + + G Q
Sbjct: 380 SAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYF 439
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAG 353
HSL G T ++D + L+E+ K +M E ++V+W +L+
Sbjct: 440 HSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGA 493
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 144/294 (48%), Gaps = 2/294 (0%)
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M G+ + +TF VL + D G+ +HS + + S FV +++ Y+KC
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
L ++ K FD M V +WN++I+ + S GEA + + M EG + T+ +IL+
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ ++ GK I + F+ ++ +G+AL+ MYA+C +A +VF + KNL++W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+ ++ +A HG EAL + MMQ+ I PN TFI +L+ +EE + +I
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEE-LSRIHLLIT 239
Query: 509 DHGISPRMDHIASVVHLFA-CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+HG+ ++V+++ C E I E W L++G H
Sbjct: 240 EHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLH 293
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G +VI N L MY K + +A+++FD MP R+ +SW+ ++ ++Q G E L
Sbjct: 342 VECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVL 401
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG-KEIHGRMYRSGLELNSHVSNCLINM 120
R M ++ N T+V +S+C+ G G + H + G+E+ + CL+++
Sbjct: 402 KLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDL 461
Query: 121 YGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
G+ G L A+ ++ E ++W SLL +
Sbjct: 462 LGRAGKLQEAEKYISKMPSEPEIVTWASLLGA 493
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 205/665 (30%), Positives = 348/665 (52%), Gaps = 17/665 (2%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY DA+ FD + +RN+ SW+ L++ F+ G + L M + P+ T
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
++ A+ +C R G IH + S LE++ VSN L+NMY KCG LS A+ VF A +
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVF-AKM 119
Query: 139 ER--NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
ER N ISW + ++ G L+ F G+ ++ + ++L AC+ ++ G
Sbjct: 120 ERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 179
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ--LPDLTAWSALIGGYA 254
IHS + E + VA ++ +Y +C ++ A +VF + L D+ +W+ ++ Y
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
+ +AI L+ +M L P +VT+ +L A + ++ GR LH I+
Sbjct: 240 HNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 296
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL------ASCH-YGEAIELL 367
V N ++ Y+KC E+ FD+M++ ++SW +I+ ++ +CH + + +EL
Sbjct: 297 VGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELE 356
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
K+ + P+ + ILN +D+ A+E GK G S+ +G+A+V++Y KC
Sbjct: 357 KNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKC 416
Query: 428 GRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
G + +AR++FD + S+ V WN M+ YAQ G EAL+++ M+ ++P+ +F+ +
Sbjct: 417 GEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSI 476
Query: 487 LSACVHIGLVEEGWHYFNSMIRDH-GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
L AC H GL ++G YF SM ++ ++ + H V L G+ + A EF++ P++
Sbjct: 477 LLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVK 536
Query: 546 PNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVR 605
P+ V W LL+ C+ H+DL + A K+L +P + ++ LSN+YAE W AKVR
Sbjct: 537 PDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVR 596
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPI 665
K M E+ +KK+ G S E+ MH F+T A + ++ E + +L + + GYVPD
Sbjct: 597 KFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTK 656
Query: 666 YSSHF 670
HF
Sbjct: 657 MVLHF 661
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 196/401 (48%), Gaps = 26/401 (6%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPEVAL 61
SGF ++ N ++ MY + + +A+K+FD M E R+V+SW+ ++S + + A+
Sbjct: 189 SGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAI 248
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
++ M L P+ TYV +SAC+S D G+ +H ++ LE N V N L++MY
Sbjct: 249 QLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMY 305
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ---CGEHVHGLKIFLLSRKSG----VA 174
KCG + A+ VFD +R+ ISW +++S+Y + E H + L K+G V
Sbjct: 306 AKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVK 365
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ ++L ACA + L+ G + C L DK V ++NLY KC +++ A R+
Sbjct: 366 PDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRI 425
Query: 235 FSNI-QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
F + PD+ W+A+I YAQ G++ EA+ LF +M G+ P +F +L A +
Sbjct: 426 FDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGL 485
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES--LKTFDEMDEH-----DVVS 346
G+ + + + + V T+ F +LL LK +E E D V+
Sbjct: 486 EDQGKSYFTSMT----TEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVA 541
Query: 347 WNALIAGHLASCHYGEAIELLKDML-FEGHCPNLY-TYSNI 385
W +L+A A E+ +L E C Y SNI
Sbjct: 542 WTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNI 582
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 14/283 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ NVI N L+ MY K +A+ +FD+M +R++ISW+ +IS + + + A
Sbjct: 286 IVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEA 345
Query: 61 LNYFRLMV-------CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV 113
+ F+ M+ ++P+ +V ++ACA GK + + GL + V
Sbjct: 346 CHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAV 405
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
++N+YGKCG + A+ +FDA R + W ++++ Y Q G+ LK+F G
Sbjct: 406 GTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEG 465
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA-MGLI-NLYAKCEKLDL 230
V FS S+L AC+ G G + + + + G + +L + +L
Sbjct: 466 VRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKE 525
Query: 231 ASRVFSNIQL-PDLTAWSALIGG---YAQLGKACEAIDLFVKM 269
A + + PD AW++L+ + L +A E + +++
Sbjct: 526 AEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRL 568
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 198/654 (30%), Positives = 346/654 (52%), Gaps = 6/654 (0%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
+SG P L+L +V R+++A F + + +I GF+ +P AL
Sbjct: 52 SSGSRPK-----SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALA 106
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+R M+ P+ +T+ + CA G G+ H + + GL + + +N L+ +Y
Sbjct: 107 AYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYA 166
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCA 181
K GL+ A+ VFD R+ +SW +++ Y G L F ++ V
Sbjct: 167 KLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVI 226
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ L AC + L +G +IH + LE D V L+++Y KC + A VF+ + L
Sbjct: 227 AALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLR 286
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ W+ +IGGYA + +A D F++M G VT +L A A + ++ GR +H
Sbjct: 287 TVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVH 346
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ +++ F + +L+ Y K +E S K F ++ + +VSWN +IA ++ Y
Sbjct: 347 AYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQ 406
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EAI L ++L + P+ +T + ++ + +I KQ H IVK G+ + +I +A++
Sbjct: 407 EAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVM 466
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
MYA+CG + +R++FD + K+++SWNT+++GYA HG G+ ALE++ M+ + ++PN++
Sbjct: 467 HMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNES 526
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL+AC GL EGW FNSM +++G+ P+++H + L G+ R FI++
Sbjct: 527 TFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIEN 586
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
PI P +W LL+ + D+ + YAAE+I + +T +++LS++YA+A W++
Sbjct: 587 MPIAPTSRIWGSLLTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDV 646
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
++R +MKEK L++ S EL NK F + Q +HE + LS ++
Sbjct: 647 ERIRSLMKEKGLRRTEARSLVELNNKECSFVNGDMSHPQSEKIHEFSDILSRNI 700
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 194/391 (49%), Gaps = 1/391 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G +V T N L+ +Y K + DA+++FD MP R+++SW+ ++ G+ GM +A
Sbjct: 146 VIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALA 205
Query: 61 LNYFRLMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L FR M + + + + A++AC G+EIHG R GLE + V L++
Sbjct: 206 LACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVD 265
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG + A+ VF R ++W ++ Y V F+ R G + +
Sbjct: 266 MYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVT 325
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++L ACA + G +H+ V + + L+ +Y K K++ + ++F I
Sbjct: 326 AINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQIT 385
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
L +W+ +I Y + EAI LF+++ + L P T + V+ AF + +Q
Sbjct: 386 DKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQ 445
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+HS I+K+G+ T + N V+ Y++C + S + FD+M DV+SWN +I G+
Sbjct: 446 MHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQ 505
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
A+E+ +M G PN T+ ++L S
Sbjct: 506 GKIALEMFDEMKCSGMEPNESTFVSVLTACS 536
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 161/339 (47%), Gaps = 1/339 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G +V L+ MY K + A+ +F +MP R V++W+ +I G++ P A
Sbjct: 249 IRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAF 308
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F M + T + ++ACA + G+ +H + R + + L+ MY
Sbjct: 309 DCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMY 368
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
GK G + S++ +F ++ +SW +++++Y + + +FL + F+
Sbjct: 369 GKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMT 428
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+V+ A +LG+++ Q+HS + K + ++++YA+C + + +F +
Sbjct: 429 TVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGK 488
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA-DVKETIGGRQL 300
D+ +W+ +I GYA G+ A+++F +M SG+ P+E TF VL A + E G ++
Sbjct: 489 DVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEF 548
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
+S+ + G + D + L E L+ + M
Sbjct: 549 NSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENM 587
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 82/153 (53%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ + + N ++ MY + I ++++FD+MP ++VISW+ +I G++ G ++A
Sbjct: 450 IVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIA 509
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRG-DARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L F M C +EPN T+V ++AC+ G +A KE + G+ C+ +
Sbjct: 510 LEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTD 569
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ G+ G L +F+ + + S W SLL++
Sbjct: 570 LLGRAGELREVLRFIENMPIAPTSRIWGSLLTA 602
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 185/565 (32%), Positives = 322/565 (56%), Gaps = 11/565 (1%)
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
+H + ++G V + L+N+Y KCG++ +A+ VFD RN + W +L++ Y Q +
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
+++F +SG S F+ + L AC+ L ++ +G Q H+ + K + D +
Sbjct: 62 PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
L +LY+K LD + + F D+ +W+ +I G+A + LF++M + P+
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
+ T + VL + ++ + G Q+HSL K+G S + N+++ Y KC ++E+ F+
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241
Query: 338 EMDEHDVVSWNALIAGH-----LASCHYG------EAIELLKDMLFEGHCPNLYTYSNIL 386
M+ ++++WNA+IAGH LA ++ EA+ + + G P+L+T S+IL
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+ S + A+E G+Q H +K GF S+VV+G+ALVDMY KCG + ARK F +S++ L+
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLI 361
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
SW +M+ +A+HG + AL+++ M+ +PN TF+GVL+AC H G+V+E YF M
Sbjct: 362 SWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIM 421
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVL 566
+++ I P MDH +V +F G+ A++ IK +EPN+ +W L++GC+ H + L
Sbjct: 422 QKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEEL 481
Query: 567 GRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
G YAAE++L P T +++L N+Y A W++ + VR++MKE+ + K S ++
Sbjct: 482 GFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKG 541
Query: 627 KMHYFSTSRFAQFQGIDLHEVMNQL 651
++H F T+ +LH ++N L
Sbjct: 542 EVHSFKTNNRLHNHNAELHTLLNDL 566
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 152/525 (28%), Positives = 257/525 (48%), Gaps = 27/525 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G H + L+ +Y K + +A+K+FD +P RNV+ W+ L++G+ Q PEVA
Sbjct: 6 VIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVA 65
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M+ P+ +T A++AC+S GK+ H + + + +S + N L ++
Sbjct: 66 VEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSL 125
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L S+ F + E++ ISW +++S+ G GL++F+ V ++F+
Sbjct: 126 YSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTL 185
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL C+ + + +GMQ+HSL K E + + L+ LY KC +D A +F+ ++
Sbjct: 186 TSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEY 245
Query: 241 PDLTAWSALIGGYAQ---LGK--------ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
+L W+A+I G+AQ L K EA+ +++K+ SG P T S +L +
Sbjct: 246 KNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCS 305
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ G Q+H+ IK GF S V ++D Y KC +E + K F +M ++SW +
Sbjct: 306 RLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTS 365
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI---- 405
+I A++L +DM G PN T+ +L S ++ + +
Sbjct: 366 MITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEY 425
Query: 406 -VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGRE 463
+KP D LVDM+ + GRL++A V + + N W ++ G H G E
Sbjct: 426 KIKPVMDHY----GCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNH--GNE 479
Query: 464 ALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
L Y+ Q K+KP VL +++ + E W SM+R
Sbjct: 480 ELGFYAAEQLLKLKPRSTETYVVL---LNMYISAERWEDV-SMVR 520
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 214/671 (31%), Positives = 351/671 (52%), Gaps = 5/671 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF ++ L I A+ +F + +V ++ L+ GFS P +
Sbjct: 43 IILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSS 102
Query: 61 LNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L+ F L L+PN TY A+SA + D R+G+ IHG+ G + + + ++
Sbjct: 103 LSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVK 162
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEF 178
MY K + A+ VFD E+++I W +++S Y + +V +++F L +S +
Sbjct: 163 MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT 222
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +L A A L L++GMQIHSL K +V G I+LY+KC K+ + S +F
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF 282
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ PD+ A++A+I GY G+ ++ LF ++ SG T ++ +
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA-- 340
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H +K F S V+ + YSK +E + K FDE E + SWNA+I+G+ +
Sbjct: 341 -IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+AI L ++M PN T + IL+ + + A+ GK H + F+S++ + +
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 459
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+ MYAKCG + +AR++FD ++ KN V+WNTM+ GY HG G+EAL I+ M + I P
Sbjct: 460 ALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITP 519
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
TF+ VL AC H GLV+EG FNSMI +G P + H A +V + G +RA +F
Sbjct: 520 TPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQF 579
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I++ IEP VW LL C+ HKD L R +EK+ DP++ H++LSN+++ +
Sbjct: 580 IEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNY 639
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
+ A VR+ K++ L K G + E+ H F++ + Q +++E + +L + +
Sbjct: 640 PQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREA 699
Query: 659 GYVPDPIYSSH 669
GY P+ + H
Sbjct: 700 GYQPETELALH 710
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 218/666 (32%), Positives = 349/666 (52%), Gaps = 37/666 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF ++ N+++ +Y K S I DA+ +FDEMP RN++SW+ ++S + MP A
Sbjct: 29 IIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSVLTNSSMPHEA 88
Query: 61 LNYFRLMVCCVLE-PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L+ + M+ +E PN + Y + AC + GK +H ++++ L+++ + N L++
Sbjct: 89 LSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLD 148
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-------------- 165
MY KCG L AQ VF +N+ SW +L+ Y + G +K+F
Sbjct: 149 MYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSI 208
Query: 166 ---LLSRKS-------------GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
L+ S G+ + EF+ SVL AC L +G +IH + K E
Sbjct: 209 IAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFE 268
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFS----NIQLPD-LTAWSALIGGYAQLGKACEAID 264
+ LI++Y+ C+ L A+++F N + + L W++++ G+ G EA+
Sbjct: 269 SSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALS 328
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
+ M SG+ TFS VL + Q+H +I G+ V + ++D Y+
Sbjct: 329 MISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYA 388
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
K + +L+ F+ + + DVV+W++LI G A L DM+ G + + S
Sbjct: 389 KQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISI 448
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
+L S + + + GKQ H +K G++S V+ +AL+DMYAKCG + DA +F LS +
Sbjct: 449 VLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEID 508
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
+SW +++VG AQ+G EA+ + M E+ KPN T +GVL+AC H GLVEE W FN
Sbjct: 509 TMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFN 568
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
S+ +HG+ P +H +V + G+ A + I P +P+K +W LL C T+K+
Sbjct: 569 SIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNR 628
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
L AE +L+T PED S +IMLSNVYA MWD +KVR+ +K K KK G + E+
Sbjct: 629 DLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVK-KIGKKRAGKIFYEI 687
Query: 625 QNKMHY 630
K ++
Sbjct: 688 PFKFYF 693
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 246/513 (47%), Gaps = 38/513 (7%)
Query: 82 AVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERN 141
A C ++ K +H + +SG + + N +I++Y KC + A+ +FD RN
Sbjct: 9 AFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRN 68
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV-AISEFSCASVLGACAVLGNLKVGMQIH 200
+SW +++S L ++ +S + ++F ++VL AC ++ N+++G +H
Sbjct: 69 IVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVH 128
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
+F+ L+ D + L+++Y KC L A RVF I + T+W+ LI GYA+ G
Sbjct: 129 YHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLID 188
Query: 261 EAIDLFVK------------------------------MFSSGLMPSEVTFSYVLGAFAD 290
+A+ LF K M GL E TF VL A
Sbjct: 189 DAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGC 248
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS---- 346
E + GR++H IIK GF S + + ++D YS C+LL E+ K FD+ + VS
Sbjct: 249 SDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLA 308
Query: 347 -WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
WN++++GH+ + Y EA+ ++ M G + YT+S +L I + + Q H +
Sbjct: 309 LWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFV 368
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
+ G++ + V+GS L+D+YAK G +N+A ++F+ L K++V+W++++ G A+ G + A
Sbjct: 369 ITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAF 428
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
++ M ++ + VL AC + + G +S+ G +++ +
Sbjct: 429 SLFMDMIHLGLQIDHFVISIVLKACSSLASHQHG-KQVHSLCLKKGYESEGVVTTALIDM 487
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
+A G A E + + W ++ GC
Sbjct: 488 YAKCGDIEDALSLFGCLS-EIDTMSWTSIIVGC 519
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 130/252 (51%), Gaps = 13/252 (5%)
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
++ F Y + F +K + LHS IIK GF + F+ N ++ YSKC + ++ FD
Sbjct: 7 QIAFRYCI-RFRSIKN---AKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFD 62
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG-HCPNLYTYSNILNISSDIPAIE 396
EM ++VSW +++ S EA+ L +M+ PN + YS +L + +E
Sbjct: 63 EMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVE 122
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
GK H I + D ++V+ +AL+DMY KCG L DA++VF + KN SWNT+++GYA
Sbjct: 123 LGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYA 182
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
+ GL +A++++ M E I ++ G++ L F SM+ HG +M
Sbjct: 183 KQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRAL------RFVSMM--HGKGLKM 234
Query: 517 DHIASVVHLFAC 528
D L AC
Sbjct: 235 DEFTFPSVLKAC 246
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 182/374 (48%), Gaps = 31/374 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ITSG+ + + + L+ +Y K IN+A +LF+ +P+++V++WS+LI+G ++ G ++A
Sbjct: 368 VITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLA 427
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M+ L+ +++ + AC+S + GK++H + G E V+ LI+M
Sbjct: 428 FSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDM 487
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A +F E +++SW S++ Q G + + +SG ++ +
Sbjct: 488 YAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITI 547
Query: 181 ASVLGACAVLGNLKVGMQI-------HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
VL AC G ++ + H L+ C ++ ++++ + + + A +
Sbjct: 548 LGVLTACRHSGLVEEAWDVFNSIETNHGLI-PCPEHYN-----CMVDILGQAGRFEEAVK 601
Query: 234 VFSNIQL-PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG------ 286
+ S + PD T WS+L+G A + + ++ P +V+ +L
Sbjct: 602 LISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATS--PEDVSVYIMLSNVYAAL 659
Query: 287 ----AFADVKET---IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
+ + V+ET IG ++ + ++ F F F+ + L ++K L +K +
Sbjct: 660 GMWDSVSKVRETVKKIGKKRAGKIFYEIPF-KFYFMEHLHLG-HAKQGLNGGVVKVIYPI 717
Query: 340 DEHDVVSWNALIAG 353
E D+VSWN +IAG
Sbjct: 718 LEPDLVSWNNVIAG 731
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 116/274 (42%), Gaps = 29/274 (10%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G+ + L+ MY K I DA LF + E + +SW+++I G +Q G E A+
Sbjct: 470 LKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAI 529
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
+ M+ +PN T +G ++AC G ++ + + GL NC++++
Sbjct: 530 SLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDI 589
Query: 121 YGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCG------------EHV-----HGL 162
G+ G A + + + + + W SLL + CG EH+ +
Sbjct: 590 LGQAGRFEEAVKLISEMPFKPDKTIWSSLLGA---CGTYKNRDLANIVAEHLLATSPEDV 646
Query: 163 KIFLLSRKSGVAISEF-SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINL 221
++++ A+ + S + V +G + G + + FK F + + +G
Sbjct: 647 SVYIMLSNVYAALGMWDSVSKVRETVKKIGKKRAGKIFYEIPFK--FYFMEHLHLG---- 700
Query: 222 YAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
+AK +V I PDL +W+ +I G A
Sbjct: 701 HAKQGLNGGVVKVIYPILEPDLVSWNNVIAGLAD 734
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/654 (30%), Positives = 363/654 (55%), Gaps = 3/654 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G NV + L+ +YVK I+DA+K+FD E+N++ W+A++ GF Q + E +
Sbjct: 354 VKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETI 413
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M LE + +T+V + AC + G+++H ++ ++ + V+N +++MY
Sbjct: 414 QMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMY 473
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G + A+ +F ++S+SW +L+ E + + + G+A E S A
Sbjct: 474 SKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFA 533
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ + AC+ + + G QIH K + + V LI+LY+K ++ + +V +++
Sbjct: 534 TAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDAS 593
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ +ALI G Q + EAI+LF ++ G PS TF+ +L ++ G+Q+H
Sbjct: 594 SMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVH 653
Query: 302 SLIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLASCH 359
S +K + T + +++ Y KC+LLE++ K E+ +H ++V W A I+G+ + +
Sbjct: 654 SYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGY 713
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+++ + M + T++++L S+I A+ GK+ H I+K GF S SA
Sbjct: 714 SDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASA 773
Query: 420 LVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+DMY+KCG + + ++F L +K N++ WN+M+VG+A++G EAL ++ MQE+++KP
Sbjct: 774 LMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKP 833
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
++ T +GVL AC H GL+ EG + F+SM + +GI PR+DH A ++ L G + A E
Sbjct: 834 DEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEV 893
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I P + V+W L+ C+ HKD G+ AA+K++ +P+ +S ++ LS+++A A W
Sbjct: 894 IDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNW 953
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
E R+ M+EK + K GCSW + NK + F + ++++++ L+
Sbjct: 954 VEAKVAREAMREKGVMKFPGCSWITVGNKTNLFVVQDTHHPDTLGIYKMLDDLT 1007
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 165/555 (29%), Positives = 293/555 (52%), Gaps = 3/555 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G P+ +TY ++ R++DA+ L + + ++W+A+IS +SQ G+ +
Sbjct: 256 GSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLY 315
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M L P T+ +SA AS G++IH + GL+ N V + LIN+Y K
Sbjct: 316 KDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKH 375
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G +S A+ VFD S E+N + W ++L + Q +++F R++ + +F+ SVL
Sbjct: 376 GCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVL 435
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
GAC L +L +G Q+H + K +++ D FVA ++++Y+K +D+A +FS I D
Sbjct: 436 GACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSV 495
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ALI G A + EA+ + +M G+ P EV+F+ + A ++++ T G+Q+H
Sbjct: 496 SWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCAS 555
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK S V ++++D YSK +E S K +D +V NALI G + + EAI
Sbjct: 556 IKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAI 615
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSALVDM 423
EL + +L +G P+ +T+++IL+ + + GKQ H +K + + +G +LV +
Sbjct: 616 ELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGI 675
Query: 424 YAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
Y KC L DA K+ + KNLV W + GYAQ+G ++L ++ M+ + ++ ++ T
Sbjct: 676 YLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEAT 735
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F VL AC I + +G +I+ G ++++ +++ G ++E K
Sbjct: 736 FASVLKACSEIAALTDGKEIHGLIIKS-GFVSYETAASALMDMYSKCGDVISSFEIFKEL 794
Query: 543 PIEPNKVVWRCLLSG 557
+ N + W ++ G
Sbjct: 795 KNKQNIMPWNSMIVG 809
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 145/491 (29%), Positives = 240/491 (48%), Gaps = 35/491 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF + L+ MY K + DA+++FD + + I W+++I+G+ ++G + A
Sbjct: 186 VLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQA 245
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M P+ TYV +S AS G
Sbjct: 246 LALFSRMEKMGSAPDQVTYVTIISTLASMGR----------------------------- 276
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
LS A+ + ++++W +++SSY Q G ++ ++ G+ + +
Sbjct: 277 ------LSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTF 330
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L A A + G QIH+ K L+ + FV LINLY K + A +VF
Sbjct: 331 ASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTE 390
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+A++ G+ Q E I +F M + L + TF VLGA ++ GRQ+
Sbjct: 391 KNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQV 450
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + IK + FVAN +LD YSK ++ + F + D VSWNALI G +
Sbjct: 451 HCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEE 510
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ +LK M G P+ +++ +N S+I A E GKQ HC +K SN +GS+L
Sbjct: 511 EEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSL 570
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+D+Y+K G + +RKV H+ + ++V N ++ G Q+ EA+E++ + ++ KP++
Sbjct: 571 IDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSN 630
Query: 481 NTFIGVLSACV 491
TF +LS C
Sbjct: 631 FTFASILSGCT 641
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 207/411 (50%), Gaps = 38/411 (9%)
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD--ASLERNSISWVSLL 149
AR+ +H R+ R GL L + + L+++YG+ G + A + + S+L
Sbjct: 72 ARACGVLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVL 131
Query: 150 SSYCQCGEHVHGLKIFLLSRKS-GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
S + + G L F R S G +F A VL AC+ LG L+ G Q+H V K
Sbjct: 132 SCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGF 191
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
F GL+++YAKC ++ A RVF I PD W+++I GY ++G+ +A+ LF +
Sbjct: 192 CSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSR 251
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M G P +VT+ ++ A + GR
Sbjct: 252 MEKMGSAPDQVTYVTIISTLASM-----GR------------------------------ 276
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
L ++ + V+WNA+I+ + S E L KDM +G P T++++L+
Sbjct: 277 LSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSA 336
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
++ + A + G+Q H VK G D+NV +GS+L+++Y K G ++DA+KVFD + KN+V W
Sbjct: 337 AASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMW 396
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
N ML G+ Q+ L E ++++ M+ ++ +D TF+ VL AC+++ ++ G
Sbjct: 397 NAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIG 447
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 140/600 (23%), Positives = 275/600 (45%), Gaps = 83/600 (13%)
Query: 47 LISGFSQIGMPEVALNYFRLMVCCVL-EPNYYTYVGAVSACASRGDARSGKEIHGRMYRS 105
++S ++ G P L+ F+ + C + P+ + +SAC+ G G+++H + +S
Sbjct: 130 VLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKS 189
Query: 106 GLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF 165
G ++ L++MY KC + A+ VFD ++I W S+++ Y + G + L +F
Sbjct: 190 GFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALF 249
Query: 166 LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC 225
K G A + + +++ A +G
Sbjct: 250 SRMEKMGSAPDQVTYVTIISTLASMG---------------------------------- 275
Query: 226 EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
+L A + IQ+P AW+A+I Y+Q G E L+ M GLMP+ TF+ +L
Sbjct: 276 -RLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASML 334
Query: 286 GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
A A + G+Q+H+ +K G + FV +++++ Y K + ++ K FD E ++V
Sbjct: 335 SAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIV 394
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
WNA++ G + + E I++ + M + +T+ ++L ++ +++ G+Q HC
Sbjct: 395 MWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCIT 454
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
+K D+++ + +A++DMY+K G ++ A+ +F + K+ VSWN ++VG A + EA+
Sbjct: 455 IKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAV 514
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR-----DHGISPRMDHIA 520
+ M+ I P++ +F ++AC +I E G + I+ +H + +
Sbjct: 515 YMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVG------S 568
Query: 521 SVVHLFACRGQ---TRRAYEFIKSS---PI----------------------------EP 546
S++ L++ G +R+ + +S PI +P
Sbjct: 569 SLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKP 628
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD--PEDTSAHIMLSNVYAEANMWDETAKV 604
+ + +LSGC V+G+ L + +DTS I L +Y + + ++ K+
Sbjct: 629 SNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKL 688
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 202/610 (33%), Positives = 332/610 (54%), Gaps = 8/610 (1%)
Query: 51 FSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELN 110
S+ G A +F+ M + + Y+Y AC G+ +H RM R G+E
Sbjct: 56 LSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRM-RMGIENP 114
Query: 111 S-HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
S + NC++ MY +CG L A +FD + N++S +++S+Y + G + +F
Sbjct: 115 SVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRML 174
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
+SG ++L + L +G QIH+ V + L + + G++N+Y KC L
Sbjct: 175 ESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLV 234
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A RVF + + AW+ L+ GY Q G+A +A+ LFV + + G+ FS VL A A
Sbjct: 235 GAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACA 294
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
++E G+Q+H+ + K+G V ++DFY KC E + + F E+ E + VSW+A
Sbjct: 295 SLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSA 354
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCP-NLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
+I+G+ + EA++ K + + N +TY++I S + G Q H +K
Sbjct: 355 IISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKR 414
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
+ SAL+ MY+KCG L+DA +VF+ + + ++V+W + G+A +G EAL ++
Sbjct: 415 SLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLF 474
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
M +KPN TFI VL+AC H GLVE+G HY ++M+R + ++P +DH ++ ++A
Sbjct: 475 EKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYAR 534
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIML 588
G A F+K+ P EP+ + W+C LSGC THK+L LG+ A E++ DPEDT+ +++
Sbjct: 535 SGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLP 594
Query: 589 SNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVM 648
N+Y A W+E A+V K+M E+ LKK+ CSW + + K+H F Q +++E +
Sbjct: 595 FNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKL 654
Query: 649 NQLSVHLFDG 658
+ FDG
Sbjct: 655 KE-----FDG 659
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 231/455 (50%), Gaps = 3/455 (0%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+P+V+ N +L MY + + DA KLFDEM + N +S + +IS +++ G+ + A+ F
Sbjct: 113 NPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSR 172
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ +P Y + + + G++IH + R+GL N+ + ++NMY KCG
Sbjct: 173 MLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGW 232
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A+ VFD + ++W L+ Y Q G LK+F+ GV F + VL A
Sbjct: 233 LVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKA 292
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA L L+ G QIH+ V K LE + V L++ Y KC + A R F I+ P+ +W
Sbjct: 293 CASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSW 352
Query: 247 SALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
SA+I GY Q+ + EA+ F + S + ++ + T++ + A + + + G Q+H+ I
Sbjct: 353 SAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAI 412
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K + + ++ YSKC L+++ + F+ MD D+V+W A I+GH + EA+
Sbjct: 413 KRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALR 472
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-THCCIVKPGFDSNVVIGSALVDMY 424
L + M+ G PN T+ +L S +E GK + K + ++D+Y
Sbjct: 473 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIY 532
Query: 425 AKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
A+ G L++A + ++ + +SW L G H
Sbjct: 533 ARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTH 567
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 189/356 (53%), Gaps = 3/356 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G N ++ MYVK + A+++FD+M + ++W+ L+ G++Q G A
Sbjct: 208 VIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDA 267
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F ++ +E + + + + ACAS + R GK+IH + + GLE V L++
Sbjct: 268 LKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDF 327
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
Y KC SA F E N +SW +++S YCQ + +K F L K+ V ++ F+
Sbjct: 328 YIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFT 387
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+ AC+VL + +G Q+H+ K +L ++ LI +Y+KC LD A VF ++
Sbjct: 388 YTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMD 447
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PD+ AW+A I G+A G A EA+ LF KM S G+ P+ VTF VL A + G+
Sbjct: 448 NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKH 507
Query: 300 -LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
L +++ K + + ++D Y++ LL+E+L+ M E D +SW ++G
Sbjct: 508 YLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSG 563
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 191/410 (46%), Gaps = 3/410 (0%)
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
L S + G+ + F K+GV++S +S + AC L +L G +H+ +
Sbjct: 53 LVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIE 112
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+ ++ +Y +C L+ A ++F + + + + +I YA+ G +A+ LF +
Sbjct: 113 NPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSR 172
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M SG P ++ +L + + + GRQ+H+ +I+ G S + +++ Y KC
Sbjct: 173 MLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGW 232
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
L + + FD+M V+W L+ G+ + +A++L D++ EG + + +S +L
Sbjct: 233 LVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKA 292
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ + + +GKQ H C+ K G + V +G+ LVD Y KC A + F + N VSW
Sbjct: 293 CASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSW 352
Query: 449 NTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
+ ++ GY Q EA++ + S+ +N + N T+ + AC + G I
Sbjct: 353 SAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAI 412
Query: 508 RDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ I + A + C G A+E +S P+ V W +SG
Sbjct: 413 KRSLIGSQYGESALITMYSKC-GCLDDAHEVFESMD-NPDIVAWTAFISG 460
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 206/656 (31%), Positives = 341/656 (51%), Gaps = 32/656 (4%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
+Y + ++D+ +LF+ + ++W ++I ++ G+P +L F M+ L P++
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS-------AQ 131
+ + ACA D G+ +HG + R GL+ + + N L+NMY K L A
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170
Query: 132 FVFDASLERN-SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
V D ER S+ S+L G V ++ F + SC S
Sbjct: 171 QVLDEMTERTRSVRTASVLVG--NQGRKVSDIEAFNY---------DVSCRS-------- 211
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGL---INLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ Q+ + +K E+ + A L I + +D ++F + DL +W+
Sbjct: 212 --REFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWN 269
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+I G A+ G E + + +M + L P T S VL A+ + G+++H I+
Sbjct: 270 TIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQ 329
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
G + +VA++++D Y+KC + +S + F + E D +SWN++IAG + + + E ++
Sbjct: 330 GLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFF 389
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+ ML P Y++S+I+ + + + GKQ H I + GFD N+ I S+LVDMYAKC
Sbjct: 390 RQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC 449
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G + AR++FD + +++VSW M++G A HG +A+E++ M+ I+PN F+ VL
Sbjct: 450 GNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVL 509
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
+AC H GLV+E W YFNSM D GI+P ++H A+V L G+ AY+FI PI P
Sbjct: 510 TACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPT 569
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
VW LLS C+ HK++ + A +IL DP++T A+I+L+N+Y+ A W E AK R
Sbjct: 570 GSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRAS 629
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++ ++K CSW E++NK++ F + + E M L + GYVPD
Sbjct: 630 LRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPD 685
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 106/190 (55%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G V + L+ MY K +R+ D+ ++F + ER+ ISW+++I+G Q G+ + L
Sbjct: 327 IRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 386
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+FR M+ ++P Y++ + ACA GK++HG + R+G + N +++ L++MY
Sbjct: 387 KFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 446
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + +A+ +FD R+ +SW +++ G + +++F + G+ + +
Sbjct: 447 AKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFM 506
Query: 182 SVLGACAVLG 191
+VL AC+ G
Sbjct: 507 AVLTACSHAG 516
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 198/581 (34%), Positives = 310/581 (53%)
Query: 51 FSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELN 110
S+ G + A ++ + M + ++Y AC G+ IH R+ R+ +
Sbjct: 62 LSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPS 121
Query: 111 SHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK 170
+ NCL+ MY CG Q VFD L +N +SWV ++S+Y + GE +++F +
Sbjct: 122 GSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQA 181
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDL 230
SG+ + S+L +C L++G QIHS V + L + V + N+Y +C L+
Sbjct: 182 SGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEG 241
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
A VF + + W+ L+ GY Q K A++LF +M G+ E FS VL
Sbjct: 242 AKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCG 301
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+++ GRQ+HS I+K+G S V ++DFY KC +E + ++F + E + VSW+AL
Sbjct: 302 LEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSAL 361
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
I+G S + I++ + EG N + Y+++ + + G Q H +K G
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGL 421
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
S + SA+V MY+KCGRL+ AR+ F+ + + V+W ++ GYA HG EAL +
Sbjct: 422 VSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRR 481
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
MQ ++PN TFI VL+AC H GLV E Y SM RD+G+ P +DH ++ ++ G
Sbjct: 482 MQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAG 541
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN 590
+ A E I P EP+ + W+ LL GC H DL LG+ AAE + DP DT+ +I+L N
Sbjct: 542 LLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFN 601
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+Y+ W+E VRK+M E+ LKK+ CSW ++ ++H F
Sbjct: 602 LYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRF 642
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 148/504 (29%), Positives = 242/504 (48%), Gaps = 17/504 (3%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+P+ N LL MY D QK+FDEM +N++SW +IS +++ G E A+ F
Sbjct: 119 NPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSD 178
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + PN Y+ + +C GK+IH + R+ L N V + NMY +CG
Sbjct: 179 MQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGW 238
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A+ VFD +N+++W L+ Y Q + L++F GV + EF + VL
Sbjct: 239 LEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKV 298
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
C L + +G QIHS + K E + V L++ Y KC ++ A R F I P+ +W
Sbjct: 299 CCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSW 358
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
SALI G++Q G+ + I +F + S G++ + ++ V A A G Q H IK
Sbjct: 359 SALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIK 418
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G S+ + + ++ YSKC L+ + + F+ +DE D V+W A+I+G+ + EA+
Sbjct: 419 RGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGF 478
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGSALV 421
+ M G PN T+ +L S + KQ + VKP D ++
Sbjct: 479 FRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHY----DCMI 534
Query: 422 DMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN--KIKP 478
D Y++ G L +A ++ + + + +SW ++L G H L++ + EN ++ P
Sbjct: 535 DTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHC----DLKLGKIAAENLFRLDP 590
Query: 479 NDNT-FIGVLSACVHIGLVEEGWH 501
D +I + + G EE H
Sbjct: 591 GDTAGYILLFNLYSAFGKWEEAGH 614
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 182/365 (49%), Gaps = 12/365 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + + N+ + MYV+ + A+ +FD M +N ++W+ L+ G++Q EVA
Sbjct: 214 VIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVA 273
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M +E + + + + C D G++IH + + G E V L++
Sbjct: 274 LELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDF 333
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + SA F E N +SW +L+S + Q G +KIF R GV ++ F
Sbjct: 334 YVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIY 393
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SV ACA NL +G Q H K L + ++ +Y+KC +LD A R F +I
Sbjct: 394 TSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE 453
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL------GAFADVKET 294
PD AW+A+I GYA G A EA+ F +M S G+ P+ VTF VL G A+ K+
Sbjct: 454 PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQY 513
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
+G S+ G + ++D YS+ LL+E+L+ + M E D +SW +L+ G
Sbjct: 514 LG-----SMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568
Query: 354 HLASC 358
A C
Sbjct: 569 CWAHC 573
>gi|255562697|ref|XP_002522354.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538432|gb|EEF40038.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 704
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 213/629 (33%), Positives = 343/629 (54%), Gaps = 16/629 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPE-VALNYFRLMVCCVL 72
N+L+ MY +DAQKLFD MP +N IS++ALI+ + + E ++ F M L
Sbjct: 47 NNLIAMYAHCGSRSDAQKLFDRMPRKNAISYNALIAAYCRDSSYETLSFKLFSDMGIQRL 106
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
PN T+ + C D G +HG++ + G + V L+ MY CG L SA
Sbjct: 107 RPNGATFTSLLQVCCLLEDWFLGSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACK 166
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VF ++E++ + W S++S Y + L +F +SG ++F+C+ L AC+ LG
Sbjct: 167 VFGYAVEKDDVFWNSMISGYLKNDRIKESLSLFGEMVRSGTIFTQFTCSMALNACSKLGY 226
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
G IH+ V + D + L+++Y C A +FS IQ+P L +W+++I
Sbjct: 227 YSQGRIIHAQVIVSNILPDSALQNALLDMYYSCGDRRTALTLFSRIQIPSLISWNSMISW 286
Query: 253 YAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
+A+ + +A+ LFVK+ S P E TF+ ++ A + + T G+ LH+ +IK G
Sbjct: 287 FAKNEEGEKAMGLFVKLLGMSTCKPDEYTFTAIISATGEFRATDYGQPLHAQVIKAGLQW 346
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE---AIELLK 368
F+ N +L Y + +E + F M+E DVV W +I GH C G+ AI+L
Sbjct: 347 SVFIGNALLSMYFRNSDVEAARGVFSLMEEKDVVLWTEMIMGH---CRLGDGESAIKLFC 403
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M EGH + + S L++ +D+ ++ G+ H VK G ++ + + +LVDMYAK G
Sbjct: 404 KMRQEGHKSDSFALSGALSVCADLAILKQGQMLHTQAVKTGCEAEISVCGSLVDMYAKNG 463
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
L A+ +F + + +L WN+M+ GY+ HG+ EA+ +++ + E + P+ TF+ +LS
Sbjct: 464 NLQAAQLIFSQVCNPDLKCWNSMIGGYSHHGMAEEAVMLFAEVLECGLTPDQVTFLSLLS 523
Query: 489 ACVHIGLVEEG---WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI- 544
AC H GLVE+G W Y ++ +GI+P H + +V L + G A E I S
Sbjct: 524 ACNHSGLVEKGKFLWDY----MKKNGITPGPKHYSCMVSLLSRAGLLDEAEELITESTCS 579
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
E + +WR LLS C ++L +G AA+++L DPED++ +I+LSN+YA WD A++
Sbjct: 580 EEHLKLWRTLLSSCVNRRNLTVGARAAKQVLRLDPEDSATYILLSNLYAVTGRWDGVAEL 639
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFST 633
RK ++ L+KD G SW E +N +H FS+
Sbjct: 640 RKKIRGLMLEKDPGVSWIEAKNDIHVFSS 668
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 233/485 (48%), Gaps = 8/485 (1%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELN----SHVSNCLINMYGKCGLLSSAQFVFDASL 138
+ C + + +++H + + + +++N LI MY CG S AQ +FD
Sbjct: 11 IKKCTTINSLKKARQLHALILATTASTSYAQSPYLNNNLIAMYAHCGSRSDAQKLFDRMP 70
Query: 139 ERNSISWVSLLSSYCQCGEH-VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+N+IS+ +L+++YC+ + K+F + + + S+L C +L + +G
Sbjct: 71 RKNAISYNALIAAYCRDSSYETLSFKLFSDMGIQRLRPNGATFTSLLQVCCLLEDWFLGS 130
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
+H V + D V L+ +Y+ C L+ A +VF D W+++I GY +
Sbjct: 131 TLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACKVFGYAVEKDDVFWNSMISGYLKND 190
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+ E++ LF +M SG + ++ T S L A + + GR +H+ +I + + N
Sbjct: 191 RIKESLSLFGEMVRSGTIFTQFTCSMALNACSKLGYYSQGRIIHAQVIVSNILPDSALQN 250
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC- 376
+LD Y C +L F + ++SWN++I+ + +A+ L +L C
Sbjct: 251 ALLDMYYSCGDRRTALTLFSRIQIPSLISWNSMISWFAKNEEGEKAMGLFVKLLGMSTCK 310
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ YT++ I++ + + A ++G+ H ++K G +V IG+AL+ MY + + AR V
Sbjct: 311 PDEYTFTAIISATGEFRATDYGQPLHAQVIKAGLQWSVFIGNALLSMYFRNSDVEAARGV 370
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
F + K++V W M++G+ + G G A++++ M++ K + G LS C + ++
Sbjct: 371 FSLMEEKDVVLWTEMIMGHCRLGDGESAIKLFCKMRQEGHKSDSFALSGALSVCADLAIL 430
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
++G ++ G + S+V ++A G + A + I S P+ W ++
Sbjct: 431 KQGQMLHTQAVKT-GCEAEISVCGSLVDMYAKNGNLQAA-QLIFSQVCNPDLKCWNSMIG 488
Query: 557 GCKTH 561
G H
Sbjct: 489 GYSHH 493
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 174/355 (49%), Gaps = 3/355 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I S P+ N LL MY A LF + ++ISW+++IS F++ E A
Sbjct: 237 VIVSNILPDSALQNALLDMYYSCGDRRTALTLFSRIQIPSLISWNSMISWFAKNEEGEKA 296
Query: 61 LNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ F +L+ +P+ YT+ +SA G+ +H ++ ++GL+ + + N L++
Sbjct: 297 MGLFVKLLGMSTCKPDEYTFTAIISATGEFRATDYGQPLHAQVIKAGLQWSVFIGNALLS 356
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY + + +A+ VF E++ + W ++ +C+ G+ +K+F R+ G F+
Sbjct: 357 MYFRNSDVEAARGVFSLMEEKDVVLWTEMIMGHCRLGDGESAIKLFCKMRQEGHKSDSFA 416
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ L CA L LK G +H+ K E + V L+++YAK L A +FS +
Sbjct: 417 LSGALSVCADLAILKQGQMLHTQAVKTGCEAEISVCGSLVDMYAKNGNLQAAQLIFSQVC 476
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PDL W+++IGGY+ G A EA+ LF ++ GL P +VTF +L A G+
Sbjct: 477 NPDLKCWNSMIGGYSHHGMAEEAVMLFAEVLECGLTPDQVTFLSLLSACNHSGLVEKGKF 536
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEES--LKTFDEMDEHDVVSWNALIA 352
L + K G + + ++ S+ LL+E+ L T E + W L++
Sbjct: 537 LWDYMKKNGITPGPKHYSCMVSLLSRAGLLDEAEELITESTCSEEHLKLWRTLLS 591
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 218/455 (47%), Gaps = 11/455 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G+ ++ LL MY + A K+F E++ + W+++ISG+ + + +L+ F
Sbjct: 140 GYVNDICVQTMLLGMYSDCGDLESACKVFGYAVEKDDVFWNSMISGYLKNDRIKESLSLF 199
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
MV +T A++AC+ G G+ IH ++ S + +S + N L++MY C
Sbjct: 200 GEMVRSGTIFTQFTCSMALNACSKLGYYSQGRIIHAQVIVSNILPDSALQNALLDMYYSC 259
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQC--GEHVHGLKIFLLSRKSGVAISEFSCAS 182
G +A +F + ISW S++S + + GE GL + LL S E++ +
Sbjct: 260 GDRRTALTLFSRIQIPSLISWNSMISWFAKNEEGEKAMGLFVKLLG-MSTCKPDEYTFTA 318
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
++ A G +H+ V K L++ F+ L+++Y + ++ A VFS ++ D
Sbjct: 319 IISATGEFRATDYGQPLHAQVIKAGLQWSVFIGNALLSMYFRNSDVEAARGVFSLMEEKD 378
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ W+ +I G+ +LG AI LF KM G S L AD+ G+ LH+
Sbjct: 379 VVLWTEMIMGHCRLGDGESAIKLFCKMRQEGHKSDSFALSGALSVCADLAILKQGQMLHT 438
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG- 361
+K G + V +++D Y+K L+ + F ++ D+ WN++I G+ H+G
Sbjct: 439 QAVKTGCEAEISVCGSLVDMYAKNGNLQAAQLIFSQVCNPDLKCWNSMIGGY---SHHGM 495
Query: 362 --EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA+ L ++L G P+ T+ ++L+ + +E GK + K G S
Sbjct: 496 AEEAVMLFAEVLECGLTPDQVTFLSLLSACNHSGLVEKGKFLWDYMKKNGITPGPKHYSC 555
Query: 420 LVDMYAKCGRLNDARKVFDH--LSSKNLVSWNTML 452
+V + ++ G L++A ++ S ++L W T+L
Sbjct: 556 MVSLLSRAGLLDEAEELITESTCSEEHLKLWRTLL 590
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G + L+ MY K + AQ +F ++ ++ W+++I G+S GM E A+
Sbjct: 441 VKTGCEAEISVCGSLVDMYAKNGNLQAAQLIFSQVCNPDLKCWNSMIGGYSHHGMAEEAV 500
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F ++ C L P+ T++ +SAC G GK + M ++G+ +C++++
Sbjct: 501 MLFAEVLECGLTPDQVTFLSLLSACNHSGLVEKGKFLWDYMKKNGITPGPKHYSCMVSLL 560
Query: 122 GKCGLLSSAQFVFDASL--ERNSISWVSLLSS 151
+ GLL A+ + S E + W +LLSS
Sbjct: 561 SRAGLLDEAEELITESTCSEEHLKLWRTLLSS 592
>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
Length = 941
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 192/601 (31%), Positives = 327/601 (54%), Gaps = 10/601 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ + N N +Y K SR+ DA ++F +P ++ +SW+A++S +++ G+ A
Sbjct: 337 VLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDA 396
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASR------GDARS---GKEIHGRMYRSGLELNS 111
+ R M P+ T++ + +C+ G+++S G+++H +M +GL+ ++
Sbjct: 397 IFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDT 456
Query: 112 HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
++ N L+ MYG+CG L A+ F +RN SW L+S Q GE GL++
Sbjct: 457 YLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLE 516
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G ++ + S+LGAC+V G+L +G IH + LE D + L+N+Y CE LD A
Sbjct: 517 GTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEA 576
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
VF + D+ +W+ +I YA G EA+ L+ +M P VT VL A A +
Sbjct: 577 RLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASL 636
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
+ + G+ +H I+ G + FV V+ FY KCE +E++ + FD + + D+V WNA+I
Sbjct: 637 RALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDKDIVCWNAMI 696
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
+ + +A L +M+ PN T +L+ S +E G H G+
Sbjct: 697 GAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYL 756
Query: 412 SNVVIGSALVDMYAK-CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
S+ + +AL++MYAK CG L A+ F+ ++SKN+VSW++++ YA++G A ++
Sbjct: 757 SHTSVVNALINMYAKCCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWT 816
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M ++ + PN TF VL AC H GL +EGW YF SM DH + P +H +V+L A G
Sbjct: 817 MNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSG 876
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN 590
+ ++A F+ + P++P+ WR LL C+ H D G AA+++L +P +++A+++L N
Sbjct: 877 RVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGALAAKQLLDAEPRNSAAYVLLYN 936
Query: 591 V 591
+
Sbjct: 937 I 937
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 177/591 (29%), Positives = 286/591 (48%), Gaps = 56/591 (9%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T + AVSACA+ GD+ GK+IH R+ SGL + +SN L+ MYGKCG + A+ FD
Sbjct: 12 TLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAFDRM 71
Query: 138 LERNSISWVSLLSSYCQ--CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
ER+ ISW ++++ Y Q CG+ ++++ SR G E + AS+L AC G+LK
Sbjct: 72 PERDLISWNAMITVYAQHECGK--QAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKF 129
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +H + D+ V GLI++Y+ C LD A+ VF PD+ W+ +I Y +
Sbjct: 130 GRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTR 189
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
GK A + KM GL +E+TF VL + ++ G+ +H L + G +
Sbjct: 190 HGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRM 249
Query: 316 ANTVLDFYSKCEL-LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
N+++ Y KC +E+ + F + V+SW+A IA + + EAI+ + M EG
Sbjct: 250 ENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAY---GQHWEAIKTFELMNLEG 306
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
PN T +++L + + A E G++ H ++ + N + +A +YAKC R+ DA
Sbjct: 307 VKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADAS 366
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC---- 490
+VF + K+ VSWN ++ YA+ GL R+A+ + MQ P+D TFI +L +C
Sbjct: 367 RVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSA 426
Query: 491 ----------------VHIGLVEEGW----HYFNSMIRDHGISPRMDHIAS--------- 521
VH ++ G + N +++ +G +D +
Sbjct: 427 LLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRN 486
Query: 522 ------VVHLFACRGQTRRAYEFIKSSPI---EPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
++ L G+ E +KS + E NK+ + LL C DL LG+ E
Sbjct: 487 VFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHE 546
Query: 573 KILSTDPE-DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWT 622
+I + E D L N+Y DE +++ E+ + +D SWT
Sbjct: 547 RIRTKGLESDIITSNALLNMYTTCESLDEA----RLVFERMVFRDV-VSWT 592
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/522 (29%), Positives = 259/522 (49%), Gaps = 14/522 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+++SG +V+ N L+ MY K + +A+ FD MPER++ISW+A+I+ ++Q + A
Sbjct: 36 ILSSGLGASVLLSNSLVYMYGKCGSVEEARNAFDRMPERDLISWNAMITVYAQHECGKQA 95
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ + +P+ T+ ++AC + GD + G+ +H + + V N LI+M
Sbjct: 96 IQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISM 155
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y CG L A VF+ S + +W +++++Y + G+ + + G+ +E +
Sbjct: 156 YSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITF 215
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK-LDLASRVFSNIQ 239
+VL C+ L L+ G +H L L+F + LI++Y KC + D A VF I
Sbjct: 216 LTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRIS 275
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
P + +WSA I Y G+ EAI F M G+ P+ T + VL A A V GR+
Sbjct: 276 RPSVISWSAFIAAY---GQHWEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRR 332
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+L++ ++ T V N Y+KC + ++ + F + D VSWNA+++ +
Sbjct: 333 IHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGL 392
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW---------GKQTHCCIVKPGF 410
+ +AI L + M EG P+ T+ IL S ++ G+Q H ++ G
Sbjct: 393 FRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGL 452
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
D + +G+ LV MY +CG L+DAR F + +N+ SW ++ Q+G E LE+
Sbjct: 453 DGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKS 512
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
M + N TFI +L AC G + G + IR G+
Sbjct: 513 MDLEGTEANKITFISLLGACSVTGDLSLG-KTIHERIRTKGL 553
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 158/329 (48%), Gaps = 4/329 (1%)
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
GV E + + + ACA LG+ G QIH+ + L ++ L+ +Y KC ++ A
Sbjct: 5 GVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEA 64
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
F + DL +W+A+I YAQ +AI L+ G P EVTF+ +L A
Sbjct: 65 RNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFAS 124
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
+ GR LH + F S V N ++ YS C L+++ F+ DV +W +I
Sbjct: 125 GDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVI 184
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
A + A M EG N T+ +L+ S + +E GK H + G D
Sbjct: 185 AAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLD 244
Query: 412 SNVVIGSALVDMYAKCGRLND-ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
++ + ++L+ MY KC R D AR+VF +S +++SW+ + Y QH EA++ + +
Sbjct: 245 FSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHW---EAIKTFEL 301
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEG 499
M +KPN T VL AC +G E+G
Sbjct: 302 MNLEGVKPNATTLTSVLRACATVGAHEQG 330
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 191/425 (44%), Gaps = 48/425 (11%)
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G+ E+T + A A + +++ G+Q+H+ I+ G + ++N+++ Y KC +EE+
Sbjct: 5 GVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEA 64
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
FD M E D++SWNA+I + +AI+L EG P+ T++++LN
Sbjct: 65 RNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFAS 124
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+++G+ H + F S+ ++ + L+ MY+ CG L+DA VF+ ++ +W T++
Sbjct: 125 GDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVI 184
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF--------- 503
Y +HG A +S M + ++ N+ TF+ VL C + ++E G H
Sbjct: 185 AAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLD 244
Query: 504 ------NSMIRDHGISPRMDHIASVVHL-------------FACRGQ---TRRAYEFIKS 541
NS+I +G R A V L A GQ + +E +
Sbjct: 245 FSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHWEAIKTFELMNL 304
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD-PEDTSAHIMLSNVYAEANMWDE 600
++PN +L C T GR +L+ ++T+ +++YA+ + +
Sbjct: 305 EGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVAD 364
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
++V S+ SW + S +A+ QG+ + LS + G+
Sbjct: 365 ASRVF-----SSIPCKDAVSWNAI--------VSAYAK-QGLFRDAIF--LSRQMQVEGF 408
Query: 661 VPDPI 665
VPD I
Sbjct: 409 VPDDI 413
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 224/687 (32%), Positives = 364/687 (52%), Gaps = 40/687 (5%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMP---ERNVISWSALISGFSQIGMPEVALN 62
F N + N L+ MY K + DA++ FD +P +R+V++W+A+IS F + G AL
Sbjct: 172 FEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQ 231
Query: 63 YFRLM-VCCVLEPNYYTYVGAVSACASRG-----DARSGKEIHGRMYRSGLELNSHVSNC 116
FR M PN T+V + +C G D R+ IHGR+ +G+E + V
Sbjct: 232 LFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRA---IHGRIVGAGIEREAFVRTA 288
Query: 117 LINMYGKCGLLSSAQFVF----DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
L++ YGK G L A VF D + ++ +++S+ Q G L++F G
Sbjct: 289 LVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEG 348
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF-----DKFVAMGLINLYAKCEK 227
S + SVL AC++L +VG + V + A+E D + L+ YA+
Sbjct: 349 TKPSGVTLVSVLNACSML---QVGSAT-AFVLEQAMEVVSATRDNVLGTTLLTTYARSND 404
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
L A F IQ PD+ +W+A+ Y Q ++ EA+ LF +M G+ PS TF L A
Sbjct: 405 LPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTA 464
Query: 288 FADVKETIG---GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD--EH 342
A G+++ SL+ + G T VAN L+ Y+KC L ++ F+ +
Sbjct: 465 CAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARR 524
Query: 343 DVVSWNALIAGHLASCHYG---EAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWG 398
D ++WN+++A + H+G EA EL + M E PN T+ +L+ S+ +I G
Sbjct: 525 DCITWNSMLAAY---GHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQG 581
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS--KNLVSWNTMLVGYA 456
++ H +V GF+S+ VI +AL++MYAKCG L+DA+ +FD SS +++++W +++ GYA
Sbjct: 582 REIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYA 641
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
Q+G AL+++ MQ+ ++PN TFI L+AC H G +E+G + M DHGI P
Sbjct: 642 QYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPAS 701
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
H + +V L G+ A + ++ + + + + W LL CK K+L G AE+I+
Sbjct: 702 KHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQ 760
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRF 636
DPE S++I+L+++YA A W+E A +RK M +K ++ D GCS E+ ++H FS
Sbjct: 761 LDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDK 820
Query: 637 AQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ + +++ + +L + GYV D
Sbjct: 821 SHPKSEEIYLELERLHWSIKAAGYVAD 847
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 169/572 (29%), Positives = 282/572 (49%), Gaps = 28/572 (4%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
H + + L++M+ K + +A+ L D +V S +A+I + + G P+ A+ F
Sbjct: 76 LHNHSFLASDLIVMHAKCGNLAEAEALADRFA--SVYSCTAMIRAWMEHGRPDKAMELFD 133
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M + PN + + V+AC+ G+ +G+ IH ++ E NS + N LI+MY KCG
Sbjct: 134 RME---VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCG 190
Query: 126 LLSSAQFVFD---ASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCA 181
L A+ FD + +R+ ++W +++S++ + G L++F + R + +
Sbjct: 191 SLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFV 250
Query: 182 SVLGACAVLG--NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF--SN 237
SVL +C G +L+ IH + +E + FV L++ Y K LD A VF
Sbjct: 251 SVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKG 310
Query: 238 IQLP--DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ P L SA+I Q G E++ LF M G PS VT VL A + ++ +
Sbjct: 311 DEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQ--V 368
Query: 296 GGRQLHSLIIKMGFSSFT---FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
G L M S T + T+L Y++ L + TFD + DVVSWNA+ A
Sbjct: 369 GSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAA 428
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP---AIEWGKQTHCCIVKPG 409
+L EA+ L + ML EG P++ T+ L + P A GK+ + + G
Sbjct: 429 AYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAG 488
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGREALEI 467
+ + + +A ++MYAKCG L DAR VF+ +S ++ ++WN+ML Y HGLG+EA E+
Sbjct: 489 LEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFEL 548
Query: 468 YSMMQENK-IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
+ M+ K +KPN TF+ VL A + +G ++ + +G ++++++
Sbjct: 549 FQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQG-REIHARVVSNGFESDTVIQNALLNMY 607
Query: 527 ACRGQTRRAYE-FIKSSPIEPNKVVWRCLLSG 557
A G A F KSS + + + W L++G
Sbjct: 608 AKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAG 639
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 171/329 (51%), Gaps = 19/329 (5%)
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHS--LVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
A S + C +L AC L LK G ++H+ L + L F+A LI ++AKC L A
Sbjct: 42 APSTYGC--LLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEA 99
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+ + + + +A+I + + G+ +A++LF +M + P+ ++ A + +
Sbjct: 100 EALAD--RFASVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCL 154
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM---DEHDVVSWN 348
GR++HS I F + + N ++ YSKC L ++ + FD + + DVV+WN
Sbjct: 155 GNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWN 214
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGH-CPNLYTYSNILN--ISSDIPAIEWGKQTHCCI 405
A+I+ L + EA++L +DM +G PN T+ ++L+ + + + ++E + H I
Sbjct: 215 AMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRI 274
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVF----DHLSSKNLVSWNTMLVGYAQHGLG 461
V G + + +ALVD Y K G L+DA +VF D S +LV+ + M+ Q+G
Sbjct: 275 VGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWP 334
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSAC 490
+E+L ++ M KP+ T + VL+AC
Sbjct: 335 QESLRLFFAMNLEGTKPSGVTLVSVLNAC 363
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 132/264 (50%), Gaps = 28/264 (10%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEM--PERNVISWSALISGFSQIGMPEVAL 61
+G + N L MY K + DA+ +F+ + R+ I+W+++++ + G+ + A
Sbjct: 487 AGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAF 546
Query: 62 NYFRLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F+ M +++PN T+V + A SR G+EIH R+ +G E ++ + N L+NM
Sbjct: 547 ELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNM 606
Query: 121 YGKCGLLSSAQFVFD--ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
Y KCG L AQ +FD +S + + I+W SL++ Y Q G+ LK+F ++ GV +
Sbjct: 607 YAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHV 666
Query: 179 SCASVLGACAVLGNLKVGMQI-------HSLV-----FKCALEFDKFVAMGLINLYAKCE 226
+ S L AC G L+ G ++ H ++ F C +++L +C
Sbjct: 667 TFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSC-----------IVDLLGRCG 715
Query: 227 KLDLASRVFSNIQLPDLTAWSALI 250
+LD A ++ D+ W AL+
Sbjct: 716 RLDEAEKLLERTSQADVITWMALL 739
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPE 58
++++GF + + N LL MY K ++DAQ +FD+ + +VI+W++LI+G++Q G E
Sbjct: 588 VVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAE 647
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE-IHGRMYRSGLELNSHVSNCL 117
AL F M + PN+ T++ A++AC G G E + G G+ S +C+
Sbjct: 648 RALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCI 707
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
+++ G+CG L A+ + + + + + I+W++LL +
Sbjct: 708 VDLLGRCGRLDEAEKLLERTSQADVITWMALLDA 741
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 207/657 (31%), Positives = 355/657 (54%), Gaps = 9/657 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G NV + L+ +Y K +DA+ +FD E+N++ W+A+++GF Q +PE A+
Sbjct: 352 VMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAI 411
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M+ L+ + +T+V + AC GK++H ++ ++++ V+N ++MY
Sbjct: 412 RMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMY 471
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G + A+ +F ++SISW +L Q E + + R G+ + S +
Sbjct: 472 SKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFS 531
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ + AC+ + + G QIH L K + + V LI+LY+K ++ + ++F+ +
Sbjct: 532 TAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDAS 591
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ +ALI G+ Q EAI LF ++ GL PS VTFS +L + + G+Q+H
Sbjct: 592 SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVH 651
Query: 302 SLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLASCH 359
+K G T + ++ Y K ++LE++ K EM +H ++ W A+I+G+ A
Sbjct: 652 CYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGY-AQNG 710
Query: 360 YGEAIELLKDMLFEGHC---PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
YG+ L HC + T++++L SD+ A GK+ H I K GF S
Sbjct: 711 YGD--HSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETA 768
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
SAL+DMY+KCG + + + F L +K +++ WN+M+VG+A++G EAL ++ M+E +
Sbjct: 769 TSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQ 828
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
IKP++ TF+GVL AC H GL+ EG H+F M + +G++PR+DH A + L G + A
Sbjct: 829 IKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEA 888
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
E I P P+ VVW L+ C+ HKD G+ AA K++ +P+ +S +++LS+++A
Sbjct: 889 QEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAAT 948
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
W E R+ M+EK + K GCSW + NK F + ++E++ L+
Sbjct: 949 GNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLT 1005
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 165/559 (29%), Positives = 287/559 (51%), Gaps = 3/559 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M G P+ +T ++ R++ A L +MP + ++W+A+ISG +Q G+
Sbjct: 250 MDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNV 309
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L ++ M L P T+ +SA A+ G+++H GL+ N V + LIN+
Sbjct: 310 LGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINL 369
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG S A+ VFD S E+N + W ++L+ + Q +++F + + EF+
Sbjct: 370 YAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTF 429
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+LGAC L + +G Q+H + K ++ FVA +++Y+K + A +FS I
Sbjct: 430 VSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY 489
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +W+AL G AQ + EA+ + +M G+ P +V+FS + A ++++ T G+Q+
Sbjct: 490 KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI 549
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L IK G S V ++++D YSK +E S K F ++D +V NALIAG + + +
Sbjct: 550 HCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNE 609
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSA 419
EAI+L + +L +G P+ T+S+IL+ S GKQ HC +K G + ++G +
Sbjct: 610 DEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVS 669
Query: 420 LVDMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L +Y K L DA K+ + KNL W ++ GYAQ+G G +L + M+ ++
Sbjct: 670 LAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRS 729
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
++ TF VL AC + +G + +I G ++++ +++ G ++E
Sbjct: 730 DEATFASVLKACSDVTAFADG-KEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEA 788
Query: 539 IKSSPIEPNKVVWRCLLSG 557
K + + + W ++ G
Sbjct: 789 FKELKNKQDIMPWNSMIVG 807
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 156/634 (24%), Positives = 291/634 (45%), Gaps = 73/634 (11%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVL- 72
+ L+ +Y K R+ A ER + S+L+S ++ G P L FR + C
Sbjct: 95 DSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGG 154
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P+ + +SAC+ G G+++H + +SG + L++MY KCG + +A+
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VFD ++I W S+++ Y + G + L +F K G A
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP----------------- 257
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
D+ + +I+ A +LD A+ + + P AW+A+I G
Sbjct: 258 ------------------DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISG 299
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
+AQ G + L+ M S GL P+ TF+ +L A A++K + G+Q+H+ + G +
Sbjct: 300 HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN 359
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
FV +++++ Y+KC ++ FD E ++V WNA++ G + + EAI + + M+
Sbjct: 360 VFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 419
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+ +T+ +IL + + + GKQ HC +K D ++ + +A +DMY+K G + D
Sbjct: 420 YTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGD 479
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A+ +F + K+ +SWN + VG AQ+ EA+ + M+ + I P+D +F ++AC +
Sbjct: 480 AKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSN 539
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ---TRRAYEFIKSSPI----- 544
I E G I+ +GI +S++ L++ G +R+ + + +S I
Sbjct: 540 IRATETGKQIHCLAIK-YGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINA 598
Query: 545 --------------------------EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD 578
+P+ V + +LSGC + +G+ L +
Sbjct: 599 LIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSG 658
Query: 579 P--EDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
+DT + L+ +Y ++ M ++ K+ M +
Sbjct: 659 VLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD 692
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 234/490 (47%), Gaps = 35/490 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF +V L+ MY K + +A+++FD + + I WS++I+ + ++G + A
Sbjct: 184 VVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEA 243
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M P+ T V +S AS G
Sbjct: 244 LALFSRMDKMGSAPDQVTLVTIISTLASSGR----------------------------- 274
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
L A + ++++W +++S + Q G + L ++ R G+ + +
Sbjct: 275 ------LDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTF 328
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L A A + G Q+H+ L+ + FV LINLYAKC A VF
Sbjct: 329 ASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCE 388
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+A++ G+ Q EAI +F M L E TF +LGA + G+Q+
Sbjct: 389 KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQV 448
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + IK FVAN LD YSK + ++ F + D +SWNAL G +
Sbjct: 449 HCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEE 508
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ +LK M G P+ ++S +N S+I A E GKQ HC +K G SN +GS+L
Sbjct: 509 EEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSL 568
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+D+Y+K G + +RK+F + + ++V N ++ G+ Q+ EA++++ + ++ +KP+
Sbjct: 569 IDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSS 628
Query: 481 NTFIGVLSAC 490
TF +LS C
Sbjct: 629 VTFSSILSGC 638
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 193/399 (48%), Gaps = 36/399 (9%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
+ +HGR+ R G L + + L+ +Y K G + A + ER S + SLLS + +
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 156 GEHVHGLKIFLLSR-KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
G L F R +G +F A VL AC+ +G L G Q+H V K F
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
L+++YAKC + A RVF I PD WS++I Y ++G EA+ LF +M G
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 255
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
P +VT ++ A GR L+ +
Sbjct: 256 APDQVTLVTIISTLAS-----SGR------------------------------LDHATA 280
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
+M V+WNA+I+GH S + L KDM G P T++++L+ ++++ A
Sbjct: 281 LLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKA 340
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
G+Q H V G D+NV +GS+L+++YAKCG +DA+ VFD KN+V WN ML G
Sbjct: 341 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 400
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+ Q+ L EA+ ++ M ++ ++ TF+ +L AC ++
Sbjct: 401 FVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYL 439
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 136/304 (44%), Gaps = 45/304 (14%)
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
R LH I++ G + +++++ Y K + + E + ++L++ H S
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 358 CHYGEAIELLKDM-LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
G+ + + + G P+ + + +L+ S + + +G+Q HC +VK GF S+V
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ALVDMYAKCG + +AR+VFD ++ + + W++M+ Y + G +EAL ++S M +
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 255
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P+ T + ++S G R+DH A
Sbjct: 256 APDQVTLVTIISTLASSG--------------------RLDH----------------AT 279
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDL---VLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
+K P P+ V W ++SG L VLG Y + P ++ MLS A
Sbjct: 280 ALLKKMPT-PSTVAWNAVISG-HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLS---A 334
Query: 594 EANM 597
ANM
Sbjct: 335 AANM 338
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 208/696 (29%), Positives = 360/696 (51%), Gaps = 34/696 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNV------------------- 41
++ +GF P + +N L V+ ++I A++LFDEMP RN
Sbjct: 37 IVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRA 96
Query: 42 ------------ISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASR 89
+SW+ +I G+SQ P+ A N + M ++P++ T+ +S
Sbjct: 97 RELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDT 156
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
+ +IH + R G + V N L++ Y K L A +F ++S+S+ ++
Sbjct: 157 TTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMI 216
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ Y + G LK+F+ R S F+ A++LG ++ G QIH L K +
Sbjct: 217 TGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYV 276
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
+D FVA L++ Y+K + +DLA +F + D +++ +I GYA G+ ++ DLF ++
Sbjct: 277 WDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRL 336
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
+ F+ +L A GRQ H+ + S V N ++D Y+KCE
Sbjct: 337 QGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKF 396
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
E++ + F + + V W A+I+ ++ + EA+++ K+M E + T+++ L S
Sbjct: 397 EDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKAS 456
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
+++ ++ GKQ H +++ G S+V GS LVDMYA CG + DA +VF + +N+V WN
Sbjct: 457 ANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWN 516
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
++ Y+Q+G ++ M E+ + P+ +F+ VL+AC H GLVE+ YFNSM +
Sbjct: 517 ALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQV 576
Query: 510 HGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRY 569
+ + PR H A+++ + G+ A I P EP++V+W +L+ C+ HK+ L +
Sbjct: 577 YKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKK 636
Query: 570 AAEKILSTDP-EDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKM 628
AA+++ D D +A++ +SN+YAEA W+ AKV+K M+E+ +KK T SW E+ +++
Sbjct: 637 AADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRV 696
Query: 629 HYFSTSRFAQFQGIDLHEVMNQLSVHLFDG-GYVPD 663
H F+ + Q + +N L V L D GY PD
Sbjct: 697 HVFTANDRTHPQTEQIRRKINSL-VELMDKEGYKPD 731
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 197/630 (31%), Positives = 333/630 (52%), Gaps = 3/630 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V T N++L Y K + A LFDEMP R+ +SW+ +I+G G E + +
Sbjct: 28 GTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVL 87
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R M C E + YT+ + A G G+++H + + G N + + L++MY KC
Sbjct: 88 RCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKC 147
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L A F + + N++SW ++++ Y Q G+ + + G + + + A +L
Sbjct: 148 EKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLL 207
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF-SNIQLPDL 243
+ Q+H + K LE + LI Y+KC LD A R+F S+ + DL
Sbjct: 208 PLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDL 267
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W++L+ Y + A L + M G P +++ ++ A + + GR LH L
Sbjct: 268 VTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGL 327
Query: 304 IIKMGFSSFTFVANTVLDFYSKCEL--LEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+IK GF ++N ++ Y K + ++E+L F+ ++ D VSWN+++ G +
Sbjct: 328 VIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSE 387
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A++ M + Y++S +L SD+ + G+Q H +K G +SN + S+L+
Sbjct: 388 DAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLI 447
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
MY+KCG + DAR+ F+ S + ++WN ++ GYAQHG AL+++ +M+E K+K +
Sbjct: 448 FMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHI 507
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL+AC HIGLVE+G + M D+G+ PRM+H A V L+ G+ A I+
Sbjct: 508 TFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEE 567
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P +P+ VW+ L C++ ++ L A +L +PE+ +++LSN+Y WDE
Sbjct: 568 MPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEK 627
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
AKV+++MKE+ +KK G SW E+ N +H F
Sbjct: 628 AKVKRLMKERGVKKVPGWSWIEVNNNVHAF 657
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 229/469 (48%), Gaps = 11/469 (2%)
Query: 99 HGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
H + G + + N ++N Y KC L SA +FD R+S+SW ++++ + CG
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80
Query: 159 VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
+ R G + ++ S+L A G +G Q+HS++ K + + L
Sbjct: 81 EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140
Query: 219 INLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE 278
+++YAKCEKL+ A F +I + +W+A+I GYAQ G A L M G +
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200
Query: 279 VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD- 337
T++ +L D QLH IIK G + N ++ YSKC L+++ + FD
Sbjct: 201 GTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDS 260
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
D+V+WN+L+A +L A +LL DM G P+LY+Y++I++ +
Sbjct: 261 SAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNN 320
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKC--GRLNDARKVFDHLSSKNLVSWNTMLVGY 455
G+ H ++K GF+ +V I +AL+ MY K G + +A +F+ L K+ VSWN++L G
Sbjct: 321 GRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGL 380
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
+Q G +A++ + M+ + + +F VL +C + + G + + +G+
Sbjct: 381 SQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLG-QQIHVLALKYGLESN 439
Query: 516 MDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+S++ +++ G RR++E + + + W L+ G H
Sbjct: 440 EFVSSSLIFMYSKCGIIEDARRSFE----EASKNSSITWNALMFGYAQH 484
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 231/460 (50%), Gaps = 11/460 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ NV + LL MY K ++ DA F + + N +SW+A+I+G++Q G E A
Sbjct: 125 IIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETA 184
Query: 61 LNYFRLMVCCVLEPNYY---TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
F L+ C E TY + ++HG++ + GLEL + + N L
Sbjct: 185 ---FWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNAL 241
Query: 118 INMYGKCGLLSSAQFVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
I Y KCG L A+ +FD+S R+ ++W SLL++Y + K+ + ++ G
Sbjct: 242 ITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPD 301
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE--KLDLASRV 234
+S S++ AC G +H LV K E ++ LI++Y K + + A +
Sbjct: 302 LYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCI 361
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F +++ D +W++++ G +Q G + +A+ F+ M S+ + +FS VL + +D+
Sbjct: 362 FESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATF 421
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G+Q+H L +K G S FV+++++ YSKC ++E++ ++F+E ++ ++WNAL+ G+
Sbjct: 422 QLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGY 481
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSN 413
A++L M + + T+ +L S I +E G K C G
Sbjct: 482 AQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPR 541
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTML 452
+ + VD+Y + GRL +A+ + + + K + W T L
Sbjct: 542 MEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFL 581
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 221/673 (32%), Positives = 359/673 (53%), Gaps = 6/673 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG V N L+ M R++DA+KLF M ER+ +SW+AL+S +S G+ +
Sbjct: 171 VIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKS 230
Query: 61 LNYFRLMV-CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
F M +L + T +S CAS G +H R+GL V N L+N
Sbjct: 231 FRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVN 290
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISE 177
MY G L+ A+F+F R+ ISW +++SSY Q G ++ LK LL G
Sbjct: 291 MYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMT 350
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
FS S LGAC+ G L G +H++ + +L + V LI +Y KC ++ A R+F
Sbjct: 351 FS--SALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQL 408
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG- 296
+ D+ + + LIG YA L +A+ +F M + + +T +LG+F +
Sbjct: 409 MPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNY 468
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G LH+ I GF S +V+N+++ Y+KC LE S F + VVSWNA+IA ++
Sbjct: 469 GLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQ 528
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
H E+++L DM +G+ + + ++ S+ + ++E G Q H +K G ++ +
Sbjct: 529 HGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHV 588
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+A +DMY KCG++++ K+ + + WNT++ GYA++G +EA E + M
Sbjct: 589 VNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGR 648
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P+ TF+ +LSAC H GLV++G Y+NSM G+SP + H +V + G+ A
Sbjct: 649 TPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAE 708
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+FI+ P+ PN ++WR LLS +THK+L +GR AA+++L DP D SA+++LSN+YA +
Sbjct: 709 KFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSA 768
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W + +VR MK +L K CSW + + ++ F + ++ ++++ + L
Sbjct: 769 RWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKLR 828
Query: 657 DGGYVPDPIYSSH 669
+ GYV D + H
Sbjct: 829 EVGYVADTSSALH 841
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 238/473 (50%), Gaps = 2/473 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G NV LL +Y + DAQ+LF EMPERNV+SW+AL+ S G E AL Y
Sbjct: 73 AGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEALGY 132
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+R M + N + VS C S D +G ++ + SGL+ V+N LI+M G
Sbjct: 133 YRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGN 192
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC-AS 182
G + A+ +F ER+++SW +L+S Y G ++F R+ G+ + + S
Sbjct: 193 LGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCS 252
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
++ CA + G +HSL + L V L+N+Y+ KL A +F N+ D
Sbjct: 253 LISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRD 312
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
L +W+ +I Y Q G +A+ ++ + P +TFS LGA + + GR +H+
Sbjct: 313 LISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHA 372
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
+ +++ V N+++ Y KC +E++ + F M HDVVS N LI + +
Sbjct: 373 MTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTK 432
Query: 363 AIELLKDMLFEGHCPNLYTYSNIL-NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
A+++ M N T NIL + +S +G H + GF S+ + ++L+
Sbjct: 433 AMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLI 492
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
MYAKCG L + VF + ++++VSWN M+ QHG G E+L+++ M+ +
Sbjct: 493 TMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHD 545
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 223/458 (48%), Gaps = 4/458 (0%)
Query: 36 MPE--RNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDAR 93
MP+ R SW ISG + G A + R M + + + V+AC + R
Sbjct: 1 MPDDHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGR 60
Query: 94 S-GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
+ G IH ++GL +N ++ L+++YG + AQ +F ERN +SW +L+ +
Sbjct: 61 ACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVAL 120
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
G L + R+ +A + + A+V+ C L + G+Q+ S V L+
Sbjct: 121 SSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQV 180
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
VA LI++ ++ A ++F ++ D +W+AL+ Y+ G ++ +F M
Sbjct: 181 SVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRG 240
Query: 273 GLMPSE-VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
GL+ + T ++ A G +HSL ++ G S+ V N +++ YS L +
Sbjct: 241 GLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLAD 300
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+ F M D++SWN +I+ ++ + + +A++ L +L P+ T+S+ L S
Sbjct: 301 AEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSS 360
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
A+ G+ H ++ N+++G++L+ MY KC + DA ++F + + ++VS N +
Sbjct: 361 PGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNIL 420
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ YA G +A++++ M+ ++K N T + +L +
Sbjct: 421 IGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGS 458
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 144/315 (45%), Gaps = 4/315 (1%)
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQLHS 302
++W I G + G+ A + M G+ S + ++ A +E G +H+
Sbjct: 9 SSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHA 68
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
L K G ++ +L Y + + ++ + F EM E +VVSW AL+ ++ H E
Sbjct: 69 LTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEE 128
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+ + M E N ++ ++++ + G Q ++ G V + ++L+
Sbjct: 129 ALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLIS 188
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND-N 481
M GR++DA K+F + ++ VSWN ++ Y+ GL ++ ++S M+ + +D
Sbjct: 189 MLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDAT 248
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
T ++S C V G + +R G+ + + ++V++++ G+ A EF+
Sbjct: 249 TLCSLISVCASSDYVSYGSGVHSLCLRT-GLHSYIPVVNALVNMYSSAGKLADA-EFLFW 306
Query: 542 SPIEPNKVVWRCLLS 556
+ + + W ++S
Sbjct: 307 NMSRRDLISWNTMIS 321
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 197/663 (29%), Positives = 354/663 (53%), Gaps = 7/663 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H N ++ N ++ +VK ++ A+ LFD MP+R V++W+ L+ +++ + A FR
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 67 MV---CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH--VSNCLINMY 121
M C L P++ T+ + C + ++H + G + N VSN L+ Y
Sbjct: 136 MCRSSSCTL-PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSY 194
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+ L A +F+ E++S+++ +L++ Y + G + + +FL R+SG S+F+ +
Sbjct: 195 CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFS 254
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
VL A L + +G Q+H+L D V +++ Y+K +++ +F +
Sbjct: 255 GVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL 314
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +++ +I Y+Q + ++ F +M G F+ +L A++ GRQLH
Sbjct: 315 DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH 374
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ S V N+++D Y+KCE+ EE+ F + + VSW ALI+G++ +G
Sbjct: 375 CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHG 434
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
++L M + T++ +L S+ ++ GKQ H I++ G NV GS LV
Sbjct: 435 AGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLV 494
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAKCG + DA +VF+ + +N VSWN ++ +A +G G A+ ++ M E+ ++P+
Sbjct: 495 DMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
+ +GVL+AC H G VE+G YF +M +GI+P+ H A ++ L G+ A + +
Sbjct: 555 SILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 614
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP-EDTSAHIMLSNVYAEANMWDE 600
P EP++++W +L+ C+ HK+ L AAEK+ S + D +A++ +SN+YA A W++
Sbjct: 615 MPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
V+K M+E+ +KK SW E+ +K+H FS++ G ++ +N+L+ + GY
Sbjct: 675 VRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGY 734
Query: 661 VPD 663
PD
Sbjct: 735 KPD 737
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 180/352 (51%), Gaps = 2/352 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+T+GF + N +L Y K R+ + + LFDEMPE + +S++ +IS +SQ E +L
Sbjct: 277 VTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASL 336
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
++FR M C + + + +S A+ + G+++H + + + HV N L++MY
Sbjct: 337 HFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMY 396
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + A+ +F + +R ++SW +L+S Y Q G H GLK+F R S + + + A
Sbjct: 397 AKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFA 456
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+VL A A +L +G Q+H+ + + + F GL+++YAKC + A +VF +
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-L 300
+ +W+ALI +A G AI F KM SGL P V+ VL A + G +
Sbjct: 517 NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF 576
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALI 351
++ G + +LD + E+ K DEM E D + W++++
Sbjct: 577 QAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG NV + + L+ MY K I DA ++F+EMP+RN +SW+ALIS + G E A
Sbjct: 478 IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAA 537
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLIN 119
+ F M+ L+P+ + +G ++AC+ G G E M G+ C+++
Sbjct: 538 IGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLD 597
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
+ G+ G + A+ + D E + I W S+L++
Sbjct: 598 LLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%)
Query: 405 IVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREA 464
I+K GFD++ + +V+ + G+++ ARKV+D + KN VS NTM+ G+ + G A
Sbjct: 39 IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSA 98
Query: 465 LEIYSMMQENKI 476
+++ M + +
Sbjct: 99 RDLFDAMPDRTV 110
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 181/484 (37%), Positives = 290/484 (59%), Gaps = 2/484 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SVL C ++ G ++H+ + K E ++ LI LY KC L A RV +
Sbjct: 15 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ +W+A+I GY+Q G A EA+ LFV+M SG P+E TF+ VL + GRQ+H
Sbjct: 75 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
SL+IK F S FV +++LD Y+K + E+ + FD + E DVVS A+I+G+
Sbjct: 135 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 194
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA++L + + EG N TY+++L S + A++ G+Q H +++ VV+ ++L+
Sbjct: 195 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLI 254
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM-QENKIKPND 480
DMY+KCG L +R++FD + + ++SWN MLVGY++HGLGREA+E++ +M +ENK+KP+
Sbjct: 255 DMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDS 314
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMI-RDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ VLS C H G+ + G F M+ + G P ++H VV LF G+ A+EFI
Sbjct: 315 VTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFI 374
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
K P EP +W LL C+ H+++ +G + A ++L + E+ +++LSN+YA A WD
Sbjct: 375 KKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWD 434
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ VR++MKEK++ K+ G SW EL +H F S + + ++ + +LS+ + + G
Sbjct: 435 DVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAG 494
Query: 660 YVPD 663
YVP+
Sbjct: 495 YVPE 498
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 204/385 (52%), Gaps = 4/385 (1%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
LE + Y ++ C S+ R G+ +H M ++ E ++ LI +Y KC L A+
Sbjct: 6 LEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDAR 65
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
V D ERN +SW +++S Y Q G L +F+ SG A +EF+ A+VL +C
Sbjct: 66 RVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSS 125
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
++G QIHSLV K + E FV L+++YAK K+ A RVF + D+ + +A+I
Sbjct: 126 GFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIIS 185
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
GYAQLG EA+DLF ++ G+ + VT++ VL A + + GRQ+HS +++
Sbjct: 186 GYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPF 245
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
+ + N+++D YSKC L S + FD M E V+SWNA++ G+ EA+EL K M
Sbjct: 246 YVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMK 305
Query: 372 FEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIV--KPGFDSNVVIGSALVDMYAKCG 428
E P+ T+ +L+ S + G + +V K GF+ + +VD++ + G
Sbjct: 306 EENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAG 365
Query: 429 RLNDARKVFDHLSSKNLVS-WNTML 452
R+ +A + + + + W ++L
Sbjct: 366 RVEEAFEFIKKMPFEPTAAIWGSLL 390
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/509 (27%), Positives = 240/509 (47%), Gaps = 60/509 (11%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + + P V L+++Y K + DA+++ DEMPERNV+SW+A+ISG+SQ G A
Sbjct: 36 MIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEA 95
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ PN +T+ +++C S + G++IH + ++ E + V + L++M
Sbjct: 96 LHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDM 155
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+ VFD ER+ +S +++S Y Q G L +F ++ G+ + +
Sbjct: 156 YAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTY 215
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASVL A + L L G Q+HS V + L F + LI++Y+KC L + R+F ++
Sbjct: 216 ASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPE 275
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+A++ GY++ G EA++LF M + P VTF VL + GG +
Sbjct: 276 RTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSH-----GGME 330
Query: 300 LHSLII-------KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALI 351
L I K GF V+D + + +EE+ + +M E W +L
Sbjct: 331 DRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSL- 389
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
L +C + + + + + +L I S+
Sbjct: 390 ---LGACRVHQNVHIGE-----------FVARRLLEIESENAG----------------- 418
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV-----SW----NTMLVGYAQHGLGR 462
N VI L ++YA GR +D R V + + K ++ SW T+ +A
Sbjct: 419 -NYVI---LSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHP 474
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACV 491
E+++ ++E IK + ++ LS CV
Sbjct: 475 RKEEVFAKVRELSIKIKEAGYVPELS-CV 502
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y ++L AI G++ H ++K ++ V + + L+ +Y KC L DAR+V D +
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
+N+VSW M+ GY+Q G EAL ++ M + PN+ TF VL++C
Sbjct: 73 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCT 122
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 214/664 (32%), Positives = 343/664 (51%), Gaps = 2/664 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+IT+ + L+ Y + A+ +FD+ + + +A++ G+ Q G
Sbjct: 55 IITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRET 114
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F LM LE + + A+ ACAS D G EI G+E N V + +I+
Sbjct: 115 LELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISF 174
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
K G + AQ VFD ++ + W S++ Y Q G ++F SG+ S +
Sbjct: 175 LVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITM 234
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S++ AC +GNLK+G +H V L D V +++Y+K ++ A VF +
Sbjct: 235 TSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPT 294
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L +W+A+I G + G E+ DLF ++ S T +L + G+ L
Sbjct: 295 RNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKIL 354
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H I+ F S ++ ++D YSKC L+++ F+ M + +V++W A++ G + H
Sbjct: 355 HGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHA 413
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A+ L M EG N T+ ++++ + + +++ G+ H + + GF ++V +AL
Sbjct: 414 EDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTAL 473
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
VDMYAKCG++N A ++F H S SK++V WN+M+ GY HG G +A+ IY M E +KPN
Sbjct: 474 VDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPN 533
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ +LSAC H LVE+G FNSM RDH I P H A +V L + G+ A I
Sbjct: 534 QTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALI 593
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ P +P V LLSGC+THK++ LG ++K+L+ D + +IMLSN+YAEA WD
Sbjct: 594 EKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWD 653
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ +R +M+ + LKK G S E N +H F + +++ + L + G
Sbjct: 654 KVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSG 713
Query: 660 YVPD 663
YVPD
Sbjct: 714 YVPD 717
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 243/466 (52%), Gaps = 2/466 (0%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
K H ++ + L + V+ L+ Y L +A++VFD + + ++L Y Q
Sbjct: 49 KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G + L++F L R + + SC L ACA + ++GM+I S + +E ++FV
Sbjct: 109 GRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVG 168
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
+I+ K K+ A RVF + D+ W+++IGGY Q G A LF +M SG+
Sbjct: 169 SSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIK 228
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
PS +T + ++ A + G+ +H ++ +G + V + +D YSK +E +
Sbjct: 229 PSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWV 288
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F +M ++VSWNA+I+G + + GE+ +L ++ +L T ++L S ++
Sbjct: 289 FYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASL 348
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
GK H C ++ F+SN+++ +A+VD+Y+KCG L A VF+ + +N+++W MLVG
Sbjct: 349 ATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGL 407
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
AQ+G +AL +++ MQE I N TF+ ++ +C H+G ++ G + R G +
Sbjct: 408 AQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFR-LGFAFD 466
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ ++ ++V ++A G+ A I + V+W +++G H
Sbjct: 467 IVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMH 512
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
K I + H+ II S+ FVA ++ YS LE + FD+ + + NA++
Sbjct: 43 KNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAML 102
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
G+L S Y E +EL M + + + L + E G + V+ G +
Sbjct: 103 CGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGME 162
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
N +GS+++ K G++ +A++VFD + +K++V WN+++ GY Q G A +++ M
Sbjct: 163 KNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEM 222
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
+ IKP+ T ++ AC IG ++ G + + G+ + + S V +++ G
Sbjct: 223 HGSGIKPSPITMTSLIQACGGIGNLKLG-KCMHGYVLGLGLGNDILVLTSFVDMYSKMGD 281
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGC 558
A P N V W ++SGC
Sbjct: 282 IESARWVFYKMPTR-NLVSWNAMISGC 307
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 12/195 (6%)
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
LKD F ++ + ++L SS + W K TH I+ ++ + + LV Y+
Sbjct: 19 LKDGQFNQLPTIIHNFLSLLRESSK--NLIWVKSTHAQIITNSLSTDQFVATKLVKAYSD 76
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
L AR VFD + N ML GY Q G RE LE++ +M+ ++ + +
Sbjct: 77 LRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFA 136
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRM--DHIASVVHLFACRGQTRRAYEFIKSSPI 544
L AC E G +S + R + S + F G+ +R ++ +
Sbjct: 137 LKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGM----- 191
Query: 545 EPNK--VVWRCLLSG 557
PNK V W ++ G
Sbjct: 192 -PNKDVVCWNSIIGG 205
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 203/608 (33%), Positives = 315/608 (51%), Gaps = 71/608 (11%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC- 153
+ H R+ +S + + + N L++ Y + G L A+ VFD RN+ S+ +LLS+Y
Sbjct: 36 ARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYAR 95
Query: 154 ------------------QC--------------GEHVHGLKIFLLSRKSGVAISEFSCA 181
QC G L+ ++ +S A
Sbjct: 96 LGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFA 155
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S L ACA + + G Q+H LV + D + L+++YAKCE+ + A RVF +
Sbjct: 156 SALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPER 215
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ +W++LI Y Q G EA+ LFV+M ++G P EVT S V+ A A + GRQ+H
Sbjct: 216 NVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVH 275
Query: 302 SLIIKMGFSSFTFVANTVL-DFYSKCEL-------------------------------L 329
+ ++K V N L D Y+KC +
Sbjct: 276 AHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANV 335
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
E++ F +M E +V++WN LIA + + EAI L + + P YTY N+LN
Sbjct: 336 EDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNAC 395
Query: 390 SDIPAIEWGKQTHCCIVKPGF------DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+I ++ G+Q H ++K GF +S+V +G++LVDMY K G ++D KVF+ ++++
Sbjct: 396 GNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR 455
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
+ VSWN M+VGYAQ+G ++AL ++ M + P+ T IGVLSAC H GLV+EG YF
Sbjct: 456 DNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYF 515
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+SM DHGI+P DH +V L G + A E I P+EP+ V+W LL C+ HK+
Sbjct: 516 HSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKN 575
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
+ LG + A ++ DP+++ +++LSN+YAE W E +VR+ MK++ + K GCSW E
Sbjct: 576 VELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSWIE 635
Query: 624 LQNKMHYF 631
+ KM+ F
Sbjct: 636 IGRKMNVF 643
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 246/512 (48%), Gaps = 73/512 (14%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM------ 67
N L+ Y + R+ DA+++FDE+P RN S++AL+S ++++G P+ A F +
Sbjct: 56 NTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQC 115
Query: 68 ----VCCVLEP-----------------------NYYTYVGAVSACASRGDARSGKEIHG 100
V L N Y++ A+SACA+ D+R+G+++HG
Sbjct: 116 SYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHG 175
Query: 101 RMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH 160
+ RS + H+ + L++MY KC A+ VFDA ERN +SW SL++ Y Q G
Sbjct: 176 LVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGE 235
Query: 161 GLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC-ALEFDKFVAMGLI 219
L +F+ +G + E + +SV+ ACA L + G Q+H+ + KC L D + L+
Sbjct: 236 ALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALV 295
Query: 220 NLYAKCEK-------------------------------LDLASRVFSNIQLPDLTAWSA 248
++YAKC + ++ A VFS + ++ AW+
Sbjct: 296 DMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNV 355
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
LI YAQ G+ EAI LFV++ + P+ T+ VL A ++ + G+Q H ++K G
Sbjct: 356 LIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEG 415
Query: 309 F------SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
F S FV N+++D Y K +++ K F+ M D VSWNA+I G+ + +
Sbjct: 416 FRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKD 475
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALV 421
A+ L + ML P+ T +L+ ++ G++ H G + + +V
Sbjct: 476 ALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMV 535
Query: 422 DMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
D+ + G L +A ++ + + + V W ++L
Sbjct: 536 DLLGRAGHLKEAEELINDMPMEPDSVLWASLL 567
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 188/391 (48%), Gaps = 44/391 (11%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY K R DA+++FD MPERNV+SW++LI+ + Q G AL F M+ P+
Sbjct: 192 LVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPD 251
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLINMYGKCGL-------- 126
T +SACA R G+++H M + L + ++N L++MY KCG
Sbjct: 252 EVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIF 311
Query: 127 -----------------------LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLK 163
+ AQ VF +E+N I+W L+++Y Q GE ++
Sbjct: 312 DSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIR 371
Query: 164 IFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD------KFVAMG 217
+F+ ++ + + ++ +VL AC + +L++G Q H V K FD FV
Sbjct: 372 LFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNS 431
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
L+++Y K +D ++VF + D +W+A+I GYAQ G+A +A+ LF +M S P
Sbjct: 432 LVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPD 491
Query: 278 EVTFSYVLGAFADVKETIGGRQ-LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
VT VL A GR+ HS+ G + ++D + L+E+ +
Sbjct: 492 SVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELI 551
Query: 337 DEMD-EHDVVSWNALIAGHLASCHYGEAIEL 366
++M E D V W +L L +C + +EL
Sbjct: 552 NDMPMEPDSVLWASL----LGACRLHKNVEL 578
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 178/373 (47%), Gaps = 65/373 (17%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
NL H+ + K + + F+ L++ YA+ +L A RVF I L + +++AL+
Sbjct: 32 NLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLS 91
Query: 252 GYAQLGKACEAIDLF---------------------------------VKMFSSGLMPSE 278
YA+LG+ EA LF M + + +
Sbjct: 92 AYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNA 151
Query: 279 VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE 338
+F+ L A A K++ G Q+H L+ + + + + ++D Y+KCE E++ + FD
Sbjct: 152 YSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDA 211
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
M E +VVSWN+LI + + GEA+ L +M+ G P+ T S++++ + + A G
Sbjct: 212 MPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREG 271
Query: 399 KQTHCCIVK-PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS--------------- 442
+Q H +VK ++V+ +ALVDMYAKCGR +AR +FD + S
Sbjct: 272 RQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAK 331
Query: 443 ----------------KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
KN+++WN ++ YAQ+G EA+ ++ ++ + I P T+ V
Sbjct: 332 SANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNV 391
Query: 487 LSACVHIGLVEEG 499
L+AC +I ++ G
Sbjct: 392 LNACGNIADLQLG 404
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V N L+ MY+K I+D K+F+ M R+ +SW+A+I G++Q G + AL+ F
Sbjct: 421 GPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLF 480
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKE-IHGRMYRSGLELNSHVSNCLINMYGK 123
M+C P+ T +G +SAC G G+ H G+ + C++++ G+
Sbjct: 481 ERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGR 540
Query: 124 CGLLSSA-QFVFDASLERNSISWVSLLSS 151
G L A + + D +E +S+ W SLL +
Sbjct: 541 AGHLKEAEELINDMPMEPDSVLWASLLGA 569
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 97/249 (38%), Gaps = 43/249 (17%)
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+L S + ++ P + + H I+K + + LV YA+ GRL DAR+VF
Sbjct: 16 HLRASSPLADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVF 75
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D + +N S+N +L YA+ G EA ++ + + P+ ++ V++A G
Sbjct: 76 DEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPD----PDQCSYNAVVAALARHG--- 128
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
H A + A A +F+ N + LS
Sbjct: 129 ------------------RGHAADALRFLA----AMHADDFVL------NAYSFASALSA 160
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHI--MLSNVYAEANMWDETAKVRKIMKEKSLKK 615
C KD G +++ P HI L ++YA+ ++ +V M E+++
Sbjct: 161 CAAEKDSRTGEQ-VHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNV-- 217
Query: 616 DTGCSWTEL 624
SW L
Sbjct: 218 ---VSWNSL 223
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 191/485 (39%), Positives = 288/485 (59%), Gaps = 5/485 (1%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L C +LG LK G +H+ + D + ++ +YAKC L++A +VF + + D
Sbjct: 97 LLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKD 156
Query: 243 LTAWSALIGGYAQLG---KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ W+++I GY+Q G A A+ LF++M GL P+E S ++ + + G+Q
Sbjct: 157 VVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQ 216
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H K GF FV ++++D Y++C L ES FDE++ + VSWNALI+G
Sbjct: 217 IHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGE 276
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA+ L M EG +TYS +L SS ++E GK H ++K G +G+
Sbjct: 277 GEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNT 336
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKP 478
L+ MYAK G + DA+KVFD L ++VS N+ML+GYAQHGLG+EA+E++ MM +I+P
Sbjct: 337 LLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEP 396
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
ND TF+ VL+AC H GL++EG +YF +++ +G+ P++ H +VV LF G +A F
Sbjct: 397 NDITFLSVLTACSHAGLLDEGLYYF-ELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSF 455
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I+ PIEPN +W LL K HK+ +G YAA+K+L DP AH +LSN+YA A W
Sbjct: 456 IEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQW 515
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
+ AKVRK MK+ LKK+ CSW E++N +H FS + + Q ++E+ L+ + +
Sbjct: 516 KDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEI 575
Query: 659 GYVPD 663
GYVPD
Sbjct: 576 GYVPD 580
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 198/392 (50%), Gaps = 5/392 (1%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
LEP+ Y + C G + GK +H + S + + N ++ MY KCG L A+
Sbjct: 87 LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146
Query: 132 FVFDASLERNSISWVSLLSSYCQCG---EHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
VFD ++ ++W S+++ Y Q G L +FL + G+ +EF+ +S++ C
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
LG+ G QIH +K + + FV L+++YA+C +L + VF ++ + +W+A
Sbjct: 207 FLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNA 266
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
LI G+A+ G+ EA+ LFVKM G +E T+S +L + + G+ LH+ ++K G
Sbjct: 267 LISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSG 326
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
+V NT+L Y+K + ++ K FD + + DVVS N+++ G+ EA+EL +
Sbjct: 327 KKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFE 386
Query: 369 DMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+M+ PN T+ ++L S ++ G + K G + + + +VD++ +
Sbjct: 387 EMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRA 446
Query: 428 GRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
G L+ A+ + + N W +L H
Sbjct: 447 GLLDQAKSFIEEMPIEPNATIWGALLGASKMH 478
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 189/358 (52%), Gaps = 5/358 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPE-- 58
++ S F +++ N +L MY K + A+++FDEM ++V++W+++I+G+SQ G
Sbjct: 117 LMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSA 176
Query: 59 -VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
AL F MV L PN + V C G GK+IHG ++ G + N V + L
Sbjct: 177 TTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSL 236
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
++MY +CG L ++ VFD +N +SW +L+S + + GE L +F+ ++ G +E
Sbjct: 237 VDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATE 296
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
F+ +++L + + G+L+ G +H+ + K + +V L+++YAK + A +VF
Sbjct: 297 FTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDR 356
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVK-MFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ D+ + ++++ GYAQ G EA++LF + M + P+++TF VL A +
Sbjct: 357 LVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDE 416
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
G L+ K G TV+D + + LL+++ +EM E + W AL+
Sbjct: 417 GLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGA 474
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 126/229 (55%), Gaps = 3/229 (1%)
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
L P ++ +L + + G+ +H+ ++ F + + N++L Y+KC LE +
Sbjct: 87 LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGE---AIELLKDMLFEGHCPNLYTYSNILNISS 390
+ FDEM DVV+W ++I G+ + A+ L +M+ +G PN + S+++
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
+ + GKQ H C K GF NV +GS+LVDMYA+CG L ++R VFD L SKN VSWN
Sbjct: 207 FLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNA 266
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
++ G+A+ G G EAL ++ MQ + T+ +L + G +E+G
Sbjct: 267 LISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQG 315
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 95/184 (51%), Gaps = 5/184 (2%)
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ Y+ +L + + ++ GK H ++ F +++VI ++++ MYAKCG L AR+V
Sbjct: 89 PDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQV 148
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGRE---ALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
FD + K++V+W +M+ GY+Q G AL ++ M + ++PN+ ++ C +
Sbjct: 149 FDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFL 208
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G +G + +G + +S+V ++A G+ R + + N+V W
Sbjct: 209 GSCVDG-KQIHGCCWKYGFQENVFVGSSLVDMYARCGELRES-RLVFDELESKNEVSWNA 266
Query: 554 LLSG 557
L+SG
Sbjct: 267 LISG 270
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 228/687 (33%), Positives = 363/687 (52%), Gaps = 40/687 (5%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMP---ERNVISWSALISGFSQIGMPEVALN 62
F N + N L+ MY K + DA++ FD +P +R+V++W+A+IS F + G AL
Sbjct: 38 FEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQ 97
Query: 63 YFRLMV-CCVLEPNYYTYVGAVSACASRG-----DARSGKEIHGRMYRSGLELNSHVSNC 116
FR M PN T+V + +C G D R+ IHGR+ +G+E + V
Sbjct: 98 LFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRA---IHGRIVGAGIEREAFVRTA 154
Query: 117 LINMYGKCGLLSSAQFVF-DASLERNSISWVS---LLSSYCQCGEHVHGLKIFLLSRKSG 172
L++ YGK G L A VF S E S S V+ ++S+ Q G L++F G
Sbjct: 155 LVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEG 214
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF-----DKFVAMGLINLYAKCEK 227
S + SVL AC++L VG + V + A+E D + L+ YA+
Sbjct: 215 TKPSGVTLVSVLNACSML---PVGSAT-AFVLEQAMEVVSATRDNVLGTTLLTTYARSND 270
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
L A F IQ PD+ +W+A+ Y Q + EA+ LF +M G+ PS TF L A
Sbjct: 271 LSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTA 330
Query: 288 FADVKETIG---GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD--EH 342
A G+++ SL+ + G T VAN L+ Y+KC L ++ F+ +
Sbjct: 331 CAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRR 390
Query: 343 DVVSWNALIAGHLASCHYG---EAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWG 398
D ++WN+++A + H+G EA EL + M E PN T+ +L+ S+ +I G
Sbjct: 391 DCITWNSMLAAY---GHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQG 447
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS--KNLVSWNTMLVGYA 456
++ H +V GF+S+ VI +AL++MYAKCG L+DA+ +FD SS +++++W +++ GYA
Sbjct: 448 REIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYA 507
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
Q+G AL+++ MQ+ ++PN TFI L+AC H G +E+G + M DHGI P
Sbjct: 508 QYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPAS 567
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
H + +V L G+ A + ++ + + + + W LL CK K+L G AE+I+
Sbjct: 568 KHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQ 626
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRF 636
DPE S++I+L+++YA A W+E A +RK M +K ++ D GCS E+ ++H FS
Sbjct: 627 LDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDK 686
Query: 637 AQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ + +++ + +L + GYV D
Sbjct: 687 SHPKSEEIYLELERLHWSIKAAGYVAD 713
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 152/506 (30%), Positives = 250/506 (49%), Gaps = 23/506 (4%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ PN + + V+AC+ G+ +G+ IH ++ E NS + N LI+MY KCG L A+
Sbjct: 3 VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62
Query: 132 FVFD---ASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGAC 187
FD + +R+ ++W +++S++ + G L++F + + + SVL +C
Sbjct: 63 QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122
Query: 188 AVLG--NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF--SNIQLP-- 241
G +L+ IH + +E + FV L++ Y K LD A VF + + P
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
L SA+I Q G E++ LF M G PS VT VL A + + +G
Sbjct: 183 SLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLP--VGSATAF 240
Query: 302 SLIIKMGFSSFT---FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
L M S T + T+L Y++ L + TFD + DVVSWNA+ A +L
Sbjct: 241 VLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHH 300
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP---AIEWGKQTHCCIVKPGFDSNVV 415
EA+ L + ML EG P++ T+ L + P A GK+ + + G + +
Sbjct: 301 RPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTA 360
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ +A ++MYAKCG L DAR VF+ +S ++ ++WN+ML Y HGLG+EA E++ M+
Sbjct: 361 VANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEA 420
Query: 474 NK-IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
K +KPN TF+ VL A + +G ++ + +G ++++++A G
Sbjct: 421 EKLVKPNKVTFVAVLDASTSRTSIAQG-REIHARVVSNGFESDTVIQNALLNMYAKCGSL 479
Query: 533 RRAYE-FIKSSPIEPNKVVWRCLLSG 557
A F KSS + + + W L++G
Sbjct: 480 DDAQAIFDKSSSNQEDVIAWTSLVAG 505
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 28/264 (10%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEM--PERNVISWSALISGFSQIGMPEVAL 61
+G + N L MY K + DA+ +F+ + R+ I+W+++++ + G+ + A
Sbjct: 353 AGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAF 412
Query: 62 NYFRLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F+ M +++PN T+V + A SR G+EIH R+ +G E ++ + N L+NM
Sbjct: 413 ELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNM 472
Query: 121 YGKCGLLSSAQFVFD--ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
Y KCG L AQ +FD +S + + I+W SL++ Y Q G+ LK+F ++ GV +
Sbjct: 473 YAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHI 532
Query: 179 SCASVLGACAVLGNLKVGMQI-------HSLV-----FKCALEFDKFVAMGLINLYAKCE 226
+ S L AC G L+ G ++ H +V F C +++L +C
Sbjct: 533 TFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSC-----------IVDLLGRCG 581
Query: 227 KLDLASRVFSNIQLPDLTAWSALI 250
+LD A ++ D+ W AL+
Sbjct: 582 RLDEAEKLLERTSQADVITWMALL 605
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPE 58
++++GF + + N LL MY K ++DAQ +FD+ + +VI+W++L++G++Q G E
Sbjct: 454 VVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAE 513
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE-IHGRMYRSGLELNSHVSNCL 117
AL F M + PN+ T++ A++AC G G E + G G+ S +C+
Sbjct: 514 RALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCI 573
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
+++ G+CG L A+ + + + + + I+W++LL +
Sbjct: 574 VDLLGRCGRLDEAEKLLERTSQADVITWMALLDA 607
>gi|225462555|ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Vitis vinifera]
Length = 708
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 206/621 (33%), Positives = 343/621 (55%), Gaps = 1/621 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N + +L MY K I DA+++F+ M V W+A+I G++Q +L
Sbjct: 88 GMEKNPFVGSSILNMYAKLGDIEDAERVFECMDNLVVGCWNAMIGGYAQCSYGFESLKIV 147
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+M + + +T++ A+ C G+ G++IHG + +S + ++ V N L++MY K
Sbjct: 148 SVMQYKGISMDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKN 207
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G A VFD +++ ISW ++ + Q + + F +G+ + + + +
Sbjct: 208 GGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILF 267
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C +L G+Q H L F+ + + V LIN++++C + +A VF + +
Sbjct: 268 RFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIH 327
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+ +I GY EA++LF + GL E TFS L A + GRQ+H I
Sbjct: 328 TCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTI 387
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K GF+S +V +++L Y LL++S + F+ ++ D+VSW A+I+ + + EAI
Sbjct: 388 VKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAI 447
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
LL + G P+ + + +I N + I A K H +VK G++++V + SA++D Y
Sbjct: 448 GLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAY 507
Query: 425 AKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
AKCG + +AR+VFD S ++++ +NTM++ YA HGL REA+E + M+ ++P+ TF
Sbjct: 508 AKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATF 567
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ V+SAC H+GLVE+G +F SM D+G+ P D+ +V LF+ G A I++ P
Sbjct: 568 VSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMP 627
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
P +WR LL+GC+ H + LG +AA+K+L PE+ +A+++LS VY+E W + AK
Sbjct: 628 FPPWPAIWRSLLNGCRIHGNKELGEWAAKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAK 687
Query: 604 VRKIMKEKSLKKDTGCSWTEL 624
VRK M E+ L KD GCSW E+
Sbjct: 688 VRKGMIERGLWKDPGCSWIEI 708
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 136/475 (28%), Positives = 232/475 (48%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY K + K+F EMP +N++SW+ ++SG Q G E+ L + M+ L PN +
Sbjct: 1 MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFA 60
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
ACA+ G G +H + G+E N V + ++NMY K G + A+ VF+
Sbjct: 61 LGCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMD 120
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
W +++ Y QC LKI + + G+++ F+ + L C V+GNL G Q
Sbjct: 121 NLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQ 180
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
IH L+ + + F V L+++Y K A +VF +Q D+ +W+ + G +Q
Sbjct: 181 IHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDD 240
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
A E F K+ +GL P+ VTFS + + + + G Q H L + G S V ++
Sbjct: 241 AREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSS 300
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+++ +S+C + + FD + + N +I+G+ +CH EA+ L ++ G +
Sbjct: 301 LINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEAD 360
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T+S+ L + G+Q H IVK GF S + S+L+ Y G L+D+ + F+
Sbjct: 361 ECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFN 420
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+ +LVSW M+ G EA+ + + ++E KP++ F + + C I
Sbjct: 421 GVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGI 475
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 169/330 (51%), Gaps = 11/330 (3%)
Query: 221 LYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVT 280
+Y KC L +VF + + +L +W+ ++ G Q G+ + ++++M +GL+P+E
Sbjct: 1 MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNE-- 58
Query: 281 FSYVLGAFADVKETIGGRQL----HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
+ LG +GG++L H +K+G FV +++L+ Y+K +E++ + F
Sbjct: 59 --FALGCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVF 116
Query: 337 DEMDEHDVVSWNALIAGHLASCHYG-EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
+ MD V WNA+I G+ A C YG E+++++ M ++G + +T+ N L + +
Sbjct: 117 ECMDNLVVGCWNAMIGGY-AQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNL 175
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
+G+Q H I++ + + ++L+DMY K G A KVFD L K+++SWNT+ G
Sbjct: 176 NFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGL 235
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
+Q RE + + +KPN TF + C + G F+ + GIS
Sbjct: 236 SQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQ-FHCLAFRFGISDE 294
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
+S++++F+ G R A S+P +
Sbjct: 295 ASVTSSLINMFSRCGAMRMACLVFDSAPFK 324
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 119/266 (44%), Gaps = 25/266 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF + LL YV F ++D+ + F+ + +++SW A+IS G A
Sbjct: 387 IVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEA 446
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ + +P+ + + + CA R K +H + + G E + V++ +I+
Sbjct: 447 IGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDA 506
Query: 121 YGKCGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG + +A+ VFD S R+ I + +++ +Y G ++ F + + + S+ +
Sbjct: 507 YAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQAT 566
Query: 180 CASVLGACAVLG------------NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK 227
SV+ AC+ LG NL GM + C L++L+++
Sbjct: 567 FVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGC-----------LVDLFSRNGF 615
Query: 228 LDLASRVFSNIQLPDLTA-WSALIGG 252
L+ A + + P A W +L+ G
Sbjct: 616 LEDAKHIIETMPFPPWPAIWRSLLNG 641
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/654 (30%), Positives = 358/654 (54%), Gaps = 13/654 (1%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN-YFRLMVCCVLEP 74
L+ +Y ++ ++ FD++ ++V +W+++IS + + G A++ +++L++ +
Sbjct: 114 LVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQA 173
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
++YT+ + AC + D G++IH +++ G + + V+ LI+MY + G + A+ +F
Sbjct: 174 DFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLF 230
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D R+ SW +++S Q G L + R G+ + + AS+L CA LG++
Sbjct: 231 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDIS 290
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
IH V K LEF+ FV+ LIN+YAK L A +VF + L D+ +W+++I Y
Sbjct: 291 TATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYE 350
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF-SSFT 313
Q A F KM +GL P +T + A ++ R +H I++ G+
Sbjct: 351 QNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAV 410
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ N V+D Y+K +++ + K F+ + DVVSWN LI+G+ + EAIE+ + M
Sbjct: 411 VIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMM--- 467
Query: 374 GHCP----NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
C N T+ +IL + + A++ G + H ++K +V +G+ L+D+Y KCGR
Sbjct: 468 EECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGR 527
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L DA +F + ++ V WN ++ + HG G +AL+++ MQ+ +KP+ TFI +LSA
Sbjct: 528 LVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSA 587
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C H GLV+EG +F+ +++++GI P + H +V L G AY+FIK P+ P+
Sbjct: 588 CSHSGLVDEGKWFFH-LMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDAS 646
Query: 550 VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK 609
+W LL C+ H ++ LG++A++++ D E+ +++LSN+YA W+ KVR + +
Sbjct: 647 IWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLAR 706
Query: 610 EKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
E+ LKK G S E+ ++ F T + + +++ + L+ + GY+PD
Sbjct: 707 ERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPD 760
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 156/537 (29%), Positives = 270/537 (50%), Gaps = 22/537 (4%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
K +H + SG ++ +S L+N+Y G +S ++ FD ++ +W S++S+Y +
Sbjct: 92 AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151
Query: 155 CGEHVHGLKIF---LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
G + F LL K F VL AC L + G +IH VFK ++D
Sbjct: 152 NGHFREAIDCFYQLLLVTKFQADFYTF--PPVLKACQTLVD---GRKIHCWVFKLGFQWD 206
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
FVA LI++Y++ + +A +F ++ D+ +W+A+I G Q G A +A+D+ +M
Sbjct: 207 VFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 266
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
G+ VT + +L A + + +H +IK G FV+N +++ Y+K L +
Sbjct: 267 EGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGD 326
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+ K F +M DVVSWN++IA + + A M G P+L T ++ +I++
Sbjct: 327 AQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQ 386
Query: 392 IPAIEWGKQTHCCIVKPGF-DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
+ + H I++ G+ VVIG+A++DMYAK G ++ A KVF+ + K++VSWNT
Sbjct: 387 SRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNT 446
Query: 451 MLVGYAQHGLGREALEIYSMMQE-NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
++ GY Q+GL EA+E+Y MM+E +IK N T++ +L+A H+G +++G +I+
Sbjct: 447 LISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIK- 505
Query: 510 HGISPRMDHIAS--VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS--GCKTHKDLV 565
+ +D ++ L+ G+ A P E + V W ++S G H +
Sbjct: 506 --TNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRE-SSVPWNAIISCHGIHGHGEKA 562
Query: 566 LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK---KDTGC 619
L + + P D I L + + + + DE +M+E +K K GC
Sbjct: 563 LKLFREMQDEGVKP-DHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGC 618
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 211/431 (48%), Gaps = 2/431 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF +V L+ MY +F + A+ LFD+MP R++ SW+A+ISG Q G AL+
Sbjct: 202 GFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 261
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M + + T + CA GD + IH + + GLE VSN LINMY K
Sbjct: 262 DEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKF 321
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L AQ VF R+ +SW S++++Y Q + V F + +G+ + S+
Sbjct: 322 GNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLA 381
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFV-AMGLINLYAKCEKLDLASRVFSNIQLPDL 243
A + K +H + + + V ++++YAK +D A +VF+ I + D+
Sbjct: 382 SIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDV 441
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+W+ LI GY Q G A EAI+++ M + ++ T+ +L A+A V G ++H
Sbjct: 442 VSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHG 501
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
+IK FV ++D Y KC L +++ F ++ V WNA+I+ H H +
Sbjct: 502 HLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEK 561
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A++L ++M EG P+ T+ ++L+ S ++ GK + + G ++ +VD
Sbjct: 562 ALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVD 621
Query: 423 MYAKCGRLNDA 433
+ + G L A
Sbjct: 622 LLGRAGFLEMA 632
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 195/402 (48%), Gaps = 10/402 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G + N L+ MY KF + DAQK+F +M R+V+SW+++I+ + Q P A
Sbjct: 299 VIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTA 358
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV-SNCLIN 119
+F M LEP+ T V S A D ++ + +HG + R G + + V N +++
Sbjct: 359 RGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMD 418
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEF 178
MY K G++ SA VF+ ++ +SW +L+S Y Q G ++++ ++ + +++
Sbjct: 419 MYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQG 478
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S+L A A +G L+ GM+IH + K L D FV LI+LY KC +L A +F +
Sbjct: 479 TWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQV 538
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
W+A+I + G +A+ LF +M G+ P VTF +L A + G+
Sbjct: 539 PRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGK 598
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLAS 357
L+ + G ++D + LE + +M H D W AL L +
Sbjct: 599 WFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGAL----LGA 654
Query: 358 CHYGEAIELLK---DMLFEGHCPNLYTYSNILNISSDIPAIE 396
C IEL K D LFE N+ Y + NI +++ E
Sbjct: 655 CRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWE 696
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 141/282 (50%), Gaps = 6/282 (2%)
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
F +T+ ++LH+L++ G F++ +++ Y+ + S TFD++ DV +W
Sbjct: 83 FDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTW 142
Query: 348 NALIAGHLASCHYGEAIELLKDMLF-EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
N++I+ ++ + H+ EAI+ +L + YT+ +L + G++ HC +
Sbjct: 143 NSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVF 199
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
K GF +V + ++L+ MY++ G + AR +FD + +++ SWN M+ G Q+G +AL+
Sbjct: 200 KLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 259
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
+ M+ I + T +L C +G + +I+ HG+ + ++++++
Sbjct: 260 VLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIK-HGLEFELFVSNALINMY 318
Query: 527 ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
A G A + + + + V W +++ + + D V R
Sbjct: 319 AKFGNLGDAQKVFQQMFLR-DVVSWNSIIAAYEQNDDPVTAR 359
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 211/623 (33%), Positives = 324/623 (52%), Gaps = 6/623 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SGF+ V L Y K I AQ LF+EMP R+V+SW+ALI G+S+ G AL
Sbjct: 82 SGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEV 141
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F M+ P T VG V +C GK IHG +SGL+L+ V N L +MY K
Sbjct: 142 FVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAK 201
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
C L +A+ +F+ E+ +SW +++ +Y Q G + +F +K V ++ + S+
Sbjct: 202 CADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISL 261
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L A A L + H V K D V L+ YA C ++ A +++ + +L
Sbjct: 262 LSANAHLDS------THCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNL 315
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+ +A+I GYA+ G ++ F +M + P V +L F D G +H+
Sbjct: 316 VSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAY 375
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+K G + V N ++ YSK +E F EM E ++SWN++I+ + +A
Sbjct: 376 GLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDA 435
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+EL M GH P+ T +++L S++ +++G++ H +++ D + +ALVDM
Sbjct: 436 MELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDM 495
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y KCGRL A +VF + L +WNTM+ GY G AL YS MQE +KP+ TF
Sbjct: 496 YIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITF 555
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+GVLSAC H GLV EG YF SM D G+ P + H A +V L + G A F+K+
Sbjct: 556 LGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNME 615
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
+EP+ +W LL+ C H++L LG A+++L D ++++SN+YA WD+ A+
Sbjct: 616 VEPDSAIWGALLTSCCIHQELKLGECLAKRLLLLDYYSGGLYVLMSNLYASKGRWDDVAR 675
Query: 604 VRKIMKEKSLKKDTGCSWTELQN 626
VRK+MK+ +G S E+ +
Sbjct: 676 VRKMMKDTGGDGSSGISLIEVSS 698
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 234/524 (44%), Gaps = 16/524 (3%)
Query: 97 EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
+I + +SG +++ ++ YGK G + AQ +F+ R+ +SW +L+ Y + G
Sbjct: 74 QIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNG 133
Query: 157 EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
L++F+ + G + + ++ +C + G IH K L+ D V
Sbjct: 134 YDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKN 193
Query: 217 GLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
L ++YAKC L A +F I +W+ +IG Y Q G EA+ +F +M +
Sbjct: 194 ALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEV 253
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
+ VT +L A A + T H +IK GF++ V +++ Y+ C +E + +
Sbjct: 254 NYVTIISLLSANAHLDST------HCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLY 307
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
+ M + ++VS A+I+G+ + G +E ML P+ +IL+ +D I
Sbjct: 308 NLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIG 367
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G H +K G ++ ++ + L+ MY+K G + +F + K L+SWN+++
Sbjct: 368 SGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACI 427
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
Q G +A+E++ M+ P+ T +L+ C +G ++ G N ++R++
Sbjct: 428 QVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDF 487
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS--GCKTHKDLVLGRYAAEKI 574
A V C G+ A KS EP W ++S G H+ L Y+ +
Sbjct: 488 LETALVDMYIKC-GRLESAERVFKSIK-EPCLATWNTMISGYGLSGHEHRALSCYSEMQE 545
Query: 575 LSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTG 618
P+ + +LS +W+ R S+++D G
Sbjct: 546 QGLKPDRITFLGVLSACTHGGLVWEGKRYFR------SMREDFG 583
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 207/437 (47%), Gaps = 15/437 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I SG + N L MY K + + A+ LF+E+ E+ +SW+ +I + Q G+ + A+
Sbjct: 181 IKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAM 240
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M +E NY T + +SA A H + ++G ++ V L+ Y
Sbjct: 241 LVFKQMQKERVEVNYVTIISLLSANAHL------DSTHCYVIKTGFATDASVITSLVCSY 294
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
CG + SA +++ +RN +S +++S Y + G ++ F + + +
Sbjct: 295 AGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMV 354
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L + G+ IH+ K L D V GLI++Y+K ++ +FS +
Sbjct: 355 SILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEK 414
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
L +W+++I Q+G+ +A++LF +M G P +T + +L ++V G +LH
Sbjct: 415 QLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLH 474
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ +++ F+ ++D Y KC LE + + F + E + +WN +I+G+ S H
Sbjct: 475 NYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEH 534
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-----PGFDSNVVI 416
A+ +M +G P+ T+ +L+ + + GK+ + + PG N
Sbjct: 535 RALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHN--- 591
Query: 417 GSALVDMYAKCGRLNDA 433
+ +VD+ ++ G L +A
Sbjct: 592 -ACMVDLLSRAGFLEEA 607
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 172/356 (48%), Gaps = 6/356 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +GF + L+ Y I A L++ MP+RN++S +A+ISG+++ G +
Sbjct: 275 VIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLV 334
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M+ ++P+ V + SG IH ++GL + V N LI+M
Sbjct: 335 VECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISM 394
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + + +F E+ ISW S++S+ Q G +++F R G + +
Sbjct: 395 YSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITI 454
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L C+ +G L+ G ++H+ V + L+ + F+ L+++Y KC +L+ A RVF +I+
Sbjct: 455 ASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKE 514
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD---VKETIGG 297
P L W+ +I GY G A+ + +M GL P +TF VL A V E G
Sbjct: 515 PCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWE--GK 572
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIA 352
R S+ G ++D S+ LEE++ M+ E D W AL+
Sbjct: 573 RYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLT 628
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 107/204 (52%)
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
D I Q+ + + K GF+ + ++ LDFY K + + F+EM DVVSWNA
Sbjct: 65 DANTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNA 124
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
LI G+ + + +A+E+ ML EG P T ++ I GK H +K G
Sbjct: 125 LICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSG 184
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
D + + +AL MYAKC L A +F+ + K VSWNTM+ Y Q+GL EA+ ++
Sbjct: 185 LDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFK 244
Query: 470 MMQENKIKPNDNTFIGVLSACVHI 493
MQ+ +++ N T I +LSA H+
Sbjct: 245 QMQKERVEVNYVTIISLLSANAHL 268
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/660 (29%), Positives = 354/660 (53%), Gaps = 3/660 (0%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H N ++ N ++ YVK ++ A+ LFD MP+R V++W+ L+ ++ + A FR
Sbjct: 72 HKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQ 131
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC--LINMYGKC 124
M P+Y T+ + C + ++H + G + N ++ C L+ Y +
Sbjct: 132 MCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEV 191
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L A +F+ L+++S+++ +L++ Y + G + + +FL R+SG S+F+ + VL
Sbjct: 192 RRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVL 251
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A L + +G Q+H L D V +++ Y+K +++ +F+ + D
Sbjct: 252 KAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFV 311
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+++ +I Y+Q + E+++LF +M G F+ +L A++ GRQ+H
Sbjct: 312 SYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQA 371
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
I S V N+++D Y+KCE+ +E+ F + + VSW ALI+G++ +G +
Sbjct: 372 IVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGL 431
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L M + T++ +L S+ ++ GKQ H I++ G NV GS LVDMY
Sbjct: 432 KLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMY 491
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG + DA +VF+ + +N VSWN ++ YA +G G A+ ++ M ++ ++P+ + +
Sbjct: 492 AKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSIL 551
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVL AC H G VE+G +F +M +GI+P+ H A ++ L G+ A + + P
Sbjct: 552 GVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF 611
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP-EDTSAHIMLSNVYAEANMWDETAK 603
EP++++W +L+ C+ +K+ L AAE++ S + D +A++ +SN+YA A W+
Sbjct: 612 EPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRH 671
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
V+K M+E+ +KK SW E+ +K+H FS++ G ++ + +N+L+ + GY PD
Sbjct: 672 VKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPD 731
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 152/506 (30%), Positives = 258/506 (50%), Gaps = 18/506 (3%)
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
RG + +++ M N+ +N +I+ Y K G LSSA+ +FDA +R ++W L
Sbjct: 57 RGQVSAALKVYDEMPHK----NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTIL 112
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC--AVLGNLKVGMQIHSLVFKC 206
+ Y K+F +S + ++L C AV N VG Q+H+ K
Sbjct: 113 MGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQN-AVG-QVHAFAVKL 170
Query: 207 ALEFDKFVAMGLINLYAKCE--KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
+ + F+ + + L + CE +LDLA +F I D ++ LI GY + G EAI
Sbjct: 171 GFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIH 230
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
LF+KM SG PS+ TFS VL A + + G+QLH L + GFS V N +L FYS
Sbjct: 231 LFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYS 290
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
K + + E+ F+EM E D VS+N +I+ + + Y E++ L ++M G + ++
Sbjct: 291 KHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFAT 350
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
+L+I++++ +++ G+Q HC + DS + +G++LVDMYAKC ++A +F LS ++
Sbjct: 351 MLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRS 410
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
VSW ++ GY Q GL L++++ M+ ++ + +TF VL A + G
Sbjct: 411 TVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHA 470
Query: 505 SMIRDHGISPRMDHIAS---VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+IR S ++++ S +V ++A G + A + + P + N V W L+S +
Sbjct: 471 FIIR----SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAYADN 525
Query: 562 KDLVLGRYAAEKILSTDPEDTSAHIM 587
D A K++ + + S I+
Sbjct: 526 GDGEAAIGAFTKMIQSGLQPDSVSIL 551
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 235/475 (49%), Gaps = 10/475 (2%)
Query: 5 GFHPNVITY--NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
GF N+ N LL Y + R++ A LF+E+ +++ ++++ LI+G+ + G+ A++
Sbjct: 171 GFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIH 230
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F M +P+ +T+ G + A D G+++HG +G ++ V N +++ Y
Sbjct: 231 LFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYS 290
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
K + + +F+ E + +S+ ++SSY Q ++ L +F + G F A+
Sbjct: 291 KHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFAT 350
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L A L +L+VG Q+H + V L+++YAKCE D A +F ++
Sbjct: 351 MLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRS 410
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+W+ALI GY Q G + LF KM + L + TF+ VL A A + G+QLH+
Sbjct: 411 TVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHA 470
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
II+ G F + ++D Y+KC ++++++ F+EM + + VSWNALI+ + +
Sbjct: 471 FIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEA 530
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP--GFDSNVVIGSAL 420
AI M+ G P+ + +L S +E G + + P G + +
Sbjct: 531 AIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAM-SPIYGITPKKKHYACM 589
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVG---YAQHGLG-REALEIYSM 470
+D+ + GR +A K+ D + + + W+++L Y L R A +++SM
Sbjct: 590 LDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSM 644
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 180/352 (51%), Gaps = 2/352 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+T+GF + N +L Y K R+ + + LF+EMPE + +S++ +IS +SQ E +L
Sbjct: 271 VTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESL 330
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
N FR M C + + + +S A+ + G+++H + + + HV N L++MY
Sbjct: 331 NLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMY 390
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + A+ +F + +R+++SW +L+S Y Q G H GLK+F R + + + + A
Sbjct: 391 AKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFA 450
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+VL A A +L +G Q+H+ + + + F GL+++YAKC + A +VF +
Sbjct: 451 TVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 510
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ +W+ALI YA G AI F KM SGL P V+ VL A + G +
Sbjct: 511 NAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFF 570
Query: 302 SLIIKM-GFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALI 351
+ + G + +LD + E+ K DEM E D + W++++
Sbjct: 571 QAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 622
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 124/251 (49%), Gaps = 44/251 (17%)
Query: 298 RQLHSLIIKMGFSSFTFVAN-TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL- 355
R++ + IIK GF++ T +N TV D + ++ +LK +DEM + VS N +I+G++
Sbjct: 29 RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQV-SAALKVYDEMPHKNTVSTNTMISGYVK 87
Query: 356 ------------------------------ASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
+ H+ EA +L + M P+ T++ +
Sbjct: 88 MGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTL 147
Query: 386 LNISSD-IPAIEWGKQTHCCIVKPGFDSN--VVIGSALVDMYAKCGRLNDARKVFDHLSS 442
L +D +P G Q H VK GFD+N + + + L+ Y + RL+ A +F+ +
Sbjct: 148 LPGCNDAVPQNAVG-QVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILD 206
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
K+ V++NT++ GY + GL EA+ ++ M+++ KP+D TF GVL A V G H
Sbjct: 207 KDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVV-------GLHD 259
Query: 503 FNSMIRDHGIS 513
F + HG+S
Sbjct: 260 FALGQQLHGLS 270
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG NV + + L+ MY K I DA ++F+EMP+RN +SW+ALIS ++ G E A
Sbjct: 472 IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAA 531
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLIN 119
+ F M+ L+P+ + +G + AC+ G G E M G+ C+++
Sbjct: 532 IGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLD 591
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
+ G+ G + A+ + D E + I W S+L++
Sbjct: 592 LLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 624
>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 214/632 (33%), Positives = 342/632 (54%), Gaps = 3/632 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + + LL MY + ++DA+K+FDE+ R+++SWS++++ + + G P
Sbjct: 128 IVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREG 187
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L R MV + P+ T + AC G R K +HG + R + ++ + N LI M
Sbjct: 188 LEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVM 247
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YG+C L A+ +F++ + ++ W S++SS Q G + F ++S V ++ +
Sbjct: 248 YGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTM 307
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALE-FDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL CA LG LK G +H + + ++ D + L++ YA C K+ ++ I
Sbjct: 308 ISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIG 367
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+ LI YA+ G EA+ LFV M GLMP + + + A A G+Q
Sbjct: 368 NSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQ 427
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H + K GF+ FV N+++D YSKC ++ + FD++ E +V+WN +I G +
Sbjct: 428 IHGHVTKRGFAD-EFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGI 486
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA++L +M F N T+ + + S+ + GK H +V G ++ I +A
Sbjct: 487 SVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTA 546
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMYAKCG L A+ VF+ + K++VSW+ M+ Y HG A +++ M E+ IKPN
Sbjct: 547 LVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTKMVESHIKPN 606
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ TF+ +LSAC H G VEEG YFNSM RD+GI P +H AS+V L + G AYE I
Sbjct: 607 EVTFMNILSACRHAGSVEEGKFYFNSM-RDYGIVPNAEHFASIVDLLSRAGDIDGAYEII 665
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
KS+ + +W LL+GC+ H + L +++ DT + +LSN+YAE W
Sbjct: 666 KSTCQHIDASIWGALLNGCRIHGRMDLIHNIHKELREIRTNDTGYYTLLSNIYAEGGNWY 725
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
E+ KVR M+ LKK G S E+ +K++ F
Sbjct: 726 ESRKVRSRMEGMGLKKVPGYSSIEIDDKIYRF 757
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 149/574 (25%), Positives = 279/574 (48%), Gaps = 17/574 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISG------FSQI 54
++ +G H + + LL Y + ++ ++ +F+ P + + LI F Q+
Sbjct: 24 LVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKCYLWHHLFDQV 83
Query: 55 GMPEVALNYFRLMVCCVLEPN-YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV 113
V+L + + L N + Y + A + G G+++HGR+ ++GL + +
Sbjct: 84 ----VSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLGTDHVI 139
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
L+ MYG+ G LS A+ VFD R+ +SW S+++ Y + G GL++ GV
Sbjct: 140 GTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGV 199
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+ SV AC +G L++ +H V + + D + LI +Y +C L A
Sbjct: 200 GPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKG 259
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+F ++ P W+++I Q G EAID F KM S + + VT VL A +
Sbjct: 260 MFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGW 319
Query: 294 TIGGRQLHSLIIKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
G+ +H I++ + ++DFY+ C + K + VVSWN LI+
Sbjct: 320 LKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLIS 379
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
+ EA+ L ML +G P+ ++ ++ ++ + ++ +G+Q H + K GF +
Sbjct: 380 IYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGF-A 438
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+ + ++L+DMY+KCG ++ A +FD + K++V+WN M+ G++Q+G+ EAL+++ M
Sbjct: 439 DEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMC 498
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEG-WHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
N + N+ TF+ + AC + G + +G W + ++ G+ + ++V ++A G
Sbjct: 499 FNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVS--GVQKDLYIDTALVDMYAKCGD 556
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
+ A S P E + V W +++ H +
Sbjct: 557 LKTAQGVFNSMP-EKSVVSWSAMIAAYGIHGQIT 589
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 219/469 (46%), Gaps = 7/469 (1%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
RS ++H + +GL + S L+ Y + G L S++ VF+ +S + L+ Y
Sbjct: 15 RSLSQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKCY 74
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISE---FSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ ++ + G +++ F SV+ A +V+G L VG ++H + K L
Sbjct: 75 LWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLG 134
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
D + L+ +Y + L A +VF I++ DL +WS+++ Y + G+ E +++ M
Sbjct: 135 TDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWM 194
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
S G+ P VT V A V + +H +I+ + + N+++ Y +C L
Sbjct: 195 VSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYL 254
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
+ F+ + + W ++I+ + + EAI+ K M N T ++L
Sbjct: 255 RGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCC 314
Query: 390 SDIPAIEWGKQTHCCIVKPGFD-SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ + ++ GK HC I++ D +++ +G AL+D YA C +++ K+ + + ++VSW
Sbjct: 315 ARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSW 374
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
NT++ YA+ GL EA+ ++ M E + P+ + +SAC V G + +
Sbjct: 375 NTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFG-QQIHGHVT 433
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G + S++ +++ G AY I E + V W C++ G
Sbjct: 434 KRGFADEFVQ-NSLMDMYSKCGFVDLAYT-IFDKIWEKSIVTWNCMICG 480
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 153/317 (48%), Gaps = 6/317 (1%)
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
+C+ L +L Q+H+ + L D + L+ YA+ L + VF PD
Sbjct: 10 SCSTLRSLS---QLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFM 66
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSY--VLGAFADVKETIGGRQLHS 302
+ LI Y + + L+ G + TF Y V+ A + V + GR++H
Sbjct: 67 FGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHG 126
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
I+K G + + ++L Y + L ++ K FDE+ D+VSW++++A ++ + E
Sbjct: 127 RIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPRE 186
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
+E+L+ M+ EG P+ T ++ + + K H +++ + + ++L+
Sbjct: 187 GLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIV 246
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MY +C L A+ +F+ +S + W +M+ Q+G EA++ + MQE++++ N T
Sbjct: 247 MYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVT 306
Query: 483 FIGVLSACVHIGLVEEG 499
I VL C +G ++EG
Sbjct: 307 MISVLCCCARLGWLKEG 323
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/632 (32%), Positives = 340/632 (53%), Gaps = 4/632 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G +V T N L+ Y + DA+++FDEMPER+V+SW++L+S F GM A
Sbjct: 146 LRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDAR 205
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
M+ N + V V AC + + + G IH + GL +++N L++MY
Sbjct: 206 RALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMY 265
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
GK G + ++ VFD LE+N +SW S + + G + L++F + V + +
Sbjct: 266 GKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLS 325
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L A LG+ +G ++H K A++ D FVA L+++YAK L+ AS +F ++
Sbjct: 326 SLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDR 385
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ +W+A+I Q G EA L M SG P+ +T VL A A + G+Q+H
Sbjct: 386 NVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIH 445
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ I+ G F++N ++D YSKC L + F E E D VS+N LI G+ S
Sbjct: 446 AWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIF-ERSEKDDVSYNTLILGYSQSPWCF 504
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
E++ L K M G + ++ L+ +++ + GK+ HC +V+ + + ++L+
Sbjct: 505 ESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLL 564
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
D+Y K G L A K+F+ ++ K++ SWNTM++GY HG A E++ +M+ + + +
Sbjct: 565 DLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHV 624
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
++I VL+AC H GLV++G YF+ M+ + I P+ H A +V L GQ + E I+
Sbjct: 625 SYIAVLAACSHGGLVDKGKKYFSQMVAQN-IEPQQMHYACMVDLLGRAGQLSKCAEIIRD 683
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P N VW LL C+ H ++ L ++AAE + PE + + ++ N+YAE W+E
Sbjct: 684 MPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEA 743
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQ--NKMHYF 631
K+RK+MK + ++K+ SW + Q NK+ F
Sbjct: 744 NKIRKLMKSRKVQKNPAYSWVQDQDGNKLQAF 775
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/660 (30%), Positives = 358/660 (54%), Gaps = 39/660 (5%)
Query: 12 TYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
T+N ++ Y R+ +A++LF+ R+ I+WS+LISG+ + G A + F+ M
Sbjct: 148 TWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEG 207
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+P+ YT + C++ G + G+ IHG + ++G E N +V L++MY KC +S A+
Sbjct: 208 QKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAE 267
Query: 132 FVFD--ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
+F A + N + W ++++ Y Q G+ ++ F GV ++F+ S+L AC+
Sbjct: 268 ILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSS 327
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
+ G Q+H + + + +V L+++YAKC L A RV N++ D+ +W+++
Sbjct: 328 VSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSM 387
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I G + G EAI LF KM + + TF VL + I G+ +H L+IK GF
Sbjct: 388 IVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCC--IVGRIDGKSVHCLVIKTGF 445
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
++ V+N ++D Y+K E L + F++M E DV+SW +L+ G+ + + E+++ D
Sbjct: 446 ENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCD 505
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M G P+ + ++IL+ +++ +E+GKQ H +K G S++ + ++LV MYAKCG
Sbjct: 506 MRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGC 565
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L+DA +F + +++++W ++VGYA++G GR++L+
Sbjct: 566 LDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLK----------------------- 602
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
YF M + +GI P +H A ++ LF G+ A E + ++P+
Sbjct: 603 ------------YFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDAT 650
Query: 550 VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK 609
VW+ LL+ C+ H +L LG AA + +P + ++MLSN+Y A WD+ AK+R++MK
Sbjct: 651 VWKALLAACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMK 710
Query: 610 EKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
K + K+ GCSW E+ +++H F + + +++ ++++ + + GYVPD +S H
Sbjct: 711 SKGITKEPGCSWIEMNSRLHTFISEDRGHPREAEIYSKIDEIIRRIKEVGYVPDMNFSLH 770
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 236/470 (50%), Gaps = 42/470 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPE 58
++ +GF NV L+ MY K I++A+ LF + + N + W+A+++G++Q G
Sbjct: 238 VVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDH 297
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
A+ +FR M +E N +T+ ++AC+S G+++HG + R+G N++V + L+
Sbjct: 298 KAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALV 357
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+MY KCG L SA+ V + + + +SW S++ + G + +F + I +
Sbjct: 358 DMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHY 417
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ SVL C ++G + G +H LV K E K V+ L+++YAK E L+ A VF +
Sbjct: 418 TFPSVLN-CCIVGRID-GKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKM 475
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +W++L+ GY Q G E++ F M SG+ P + + +L A A++ G+
Sbjct: 476 FEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGK 535
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+HS IK+G S V N+++ Y+KC L+++ F M DV++W ALI G+ +
Sbjct: 536 QVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNG 595
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
++++ + M I IE G + + C
Sbjct: 596 KGRDSLKYFQQM-------------------KKIYGIEPGPEHYAC-------------- 622
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG---LGREA 464
++D++ + G+L++A+++ + + K + W +L HG LG A
Sbjct: 623 -MIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACRVHGNLELGERA 671
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 33/176 (18%)
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG-------------------- 459
L++ +K G+++DAR++FD + ++ +WNTM+ GYA G
Sbjct: 121 LLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITW 180
Query: 460 ---------LGR--EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
GR EA +++ M+ KP+ T +L C +GL+++G +++
Sbjct: 181 SSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVK 240
Query: 509 DHGISPRMDHIASVVHLFA-CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+ G + +A +V ++A CR + F + + N V+W +++G + D
Sbjct: 241 N-GFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGD 295
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/660 (29%), Positives = 351/660 (53%), Gaps = 1/660 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N + HL+ MY + + +AQ++F+ + ++V +W+ +I + Q G + AL F
Sbjct: 34 GFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMF 93
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M + P TYV ++ACAS + G EIHG++ + G E + V LINMY KC
Sbjct: 94 YQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKC 153
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A F R+ +SW +++++ Q + ++ + GV ++ + +V
Sbjct: 154 GSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVF 213
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A L G ++ LV +E D V +N++ L A R+F ++ D+
Sbjct: 214 NAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVV 273
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+ +I Y Q EA+ LF ++ G+ +++TF +L + + G+ +H L+
Sbjct: 274 TWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELV 333
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+ G+ VA ++ Y +CE ++ K F +M DV++W + + + EA+
Sbjct: 334 KEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEAL 393
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L ++M EG P T +L+ + + A++ G+Q H I++ F +V+ +AL++MY
Sbjct: 394 QLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMY 453
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG++ +A VF+ ++ ++++ WN+ML YAQHG E L++++ MQ + +K + +F+
Sbjct: 454 GKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFV 513
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI-KSSP 543
VLSA H G V +G+ YF +M++D I+P + VV L G+ + A + + K S
Sbjct: 514 SVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSG 573
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
P+ ++W LL C+TH + AAE++L DP + A+++LSNVYA A WD +
Sbjct: 574 CLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNR 633
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+RK+M+ + +KK+ G S E+ N++H F + + ++ ++ L+ + GY+PD
Sbjct: 634 MRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPD 693
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 254/491 (51%), Gaps = 6/491 (1%)
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+P+ +V + C+S + G+ +H + G E N+ V LI MY +CG + AQ
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VF+ ++ +W ++ YCQ G++ L +F ++ V ++ + ++L ACA +
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
LK GM+IH + + E D FV LIN+Y KC + A F ++ D+ +W+A+I
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Q + A L+ +M G++P+++T V A+ D G+ ++ L+ S
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V N+ ++ + LL ++ + F++M + DVV+WN +I ++ + ++GEA+ L +
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+G N T+ +LN+ + + ++ GK H + + G+D + V+ +AL+ +Y +C
Sbjct: 301 DGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQ 360
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A K+F + SK++++W M V YAQ+G +EAL+++ MQ +P T + VL C H
Sbjct: 361 AWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAH 420
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHI--ASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
+ +++G + +I + RM+ + ++++++ G+ A + + + +V
Sbjct: 421 LAALQKGRQIHSHIIENR---FRMEMVVETALINMYGKCGKMAEAMSVFEKMA-KRDILV 476
Query: 551 WRCLLSGCKTH 561
W +L H
Sbjct: 477 WNSMLGAYAQH 487
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 217/455 (47%), Gaps = 3/455 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF +V L+ MY K + A F + R+V+SW+A+I+ Q +A
Sbjct: 131 ILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALA 190
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+R M + PN T +A GK ++G + +E + V N +NM
Sbjct: 191 RWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNM 250
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+G GLL A+ +F+ ++R+ ++W +++ Y Q +++F ++ GV ++ +
Sbjct: 251 FGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITF 310
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+L L +L G IH LV + + D VA L++LY +CE A ++F ++
Sbjct: 311 VLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGS 370
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+ + YAQ G EA+ LF +M G P+ T VL A + GRQ+
Sbjct: 371 KDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQI 430
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS II+ F V +++ Y KC + E++ F++M + D++ WN+++ + +Y
Sbjct: 431 HSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYY 490
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
E ++L M +G + ++ ++L+ S ++ G Q +++ +
Sbjct: 491 DETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGC 550
Query: 420 LVDMYAKCGRLNDARKVFDHLSS--KNLVSWNTML 452
+VD+ + GR+ +A + LS + + W T+L
Sbjct: 551 VVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLL 585
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 227/676 (33%), Positives = 354/676 (52%), Gaps = 19/676 (2%)
Query: 3 TSGFHPNVITYNHLLLM--------YVK-FSRINDAQKLFDEMPERNVISWSALISGFSQ 53
TSG HPN IT L + VK F NDA + + +IS + ++SG+
Sbjct: 246 TSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSE------IISRNKILSGYLH 299
Query: 54 IGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARS-GKEIHGRMYRSGLELNSH 112
G L F MV LE + T++ V A A R D+ + G+++H + GL+L
Sbjct: 300 AGQYSALLKCFMDMVESDLECDQVTFI-LVLATAVRLDSLALGQQVHCMALKLGLDLMLT 358
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
VSN LINMY K + A+ VF+ ER+ ISW S+++ Q V + +F+ + G
Sbjct: 359 VSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCG 418
Query: 173 VAISEFSCASVLGACAVLGN-LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
+ ++ SVL A + L L + QIH K D FV+ LI+ Y++ + A
Sbjct: 419 LKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEA 478
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+F DL AW+A++ GY Q + ++LF M G + T + VL +
Sbjct: 479 EVLFGRNNF-DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFL 537
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
G+Q+H+ IK G+ +V++ +LD Y KC + + FD + D V+W LI
Sbjct: 538 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLI 597
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
+G + + A+ + M G P+ +T + + SS + A+E G+Q H +K
Sbjct: 598 SGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT 657
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
S+ +G++LVDMYAKCG ++DA +F + N+ +WN MLVG AQHG G+EAL+++ M
Sbjct: 658 SDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQM 717
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
+ IKP+ TFIGVLSAC H GLV E + Y SM RD+GI P ++H + + G
Sbjct: 718 ESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGL 777
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
+ A I S +E + ++R LL+ C+ D G+ A K+L +P D+SA+++LSN+
Sbjct: 778 VKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNM 837
Query: 592 YAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
YA A+ WDE R +MK +KKD G SW E++NK+H F + Q +++ + +
Sbjct: 838 YAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDM 897
Query: 652 SVHLFDGGYVPDPIYS 667
+ GYVP+ ++
Sbjct: 898 IRDIKQEGYVPETDFT 913
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/631 (25%), Positives = 292/631 (46%), Gaps = 80/631 (12%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ-----IGMPEVAL 61
+P N+L+ MY K + A+++FD+MPER+++SW+++++ ++Q + + A
Sbjct: 78 NPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAF 137
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
FR++ V+ + T + C G + + HG + GL+ + V+ L+N+Y
Sbjct: 138 LLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIY 197
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ----------------CGEHVHGLKIF 165
K G + + +F+ R+ + W +L +Y + G H + + +
Sbjct: 198 LKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLR 257
Query: 166 LLSRKSG-----------------VAISE------------------------------- 177
LLSR SG A+SE
Sbjct: 258 LLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESD 317
Query: 178 FSCAS-----VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
C VL L +L +G Q+H + K L+ V+ LIN+Y K K+ LA
Sbjct: 318 LECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLAR 377
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
VF+N+ DL +W+++I G AQ EA+ LF+++ GL P T + VL A + +
Sbjct: 378 TVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLP 437
Query: 293 ETIG-GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
E + +Q+H IK + +FV+ ++D YS+ ++E+ F + D+V+WNA++
Sbjct: 438 EGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMM 496
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
+G+ S + +EL M +G + +T + +L + AI GKQ H +K G+D
Sbjct: 497 SGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYD 556
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
++ + S ++DMY KCG ++ A+ FD + + V+W T++ G ++G AL ++S M
Sbjct: 557 LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQM 616
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWH-YFNSMIRDHGISPRMDHIASVVHLFACRG 530
+ + P++ T + A + +E+G + N++ + P + S+V ++A G
Sbjct: 617 RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVG--TSLVDMYAKCG 674
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
AY K + N W +L G H
Sbjct: 675 SIDDAYCLFKRIEMM-NITAWNAMLVGLAQH 704
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 195/420 (46%), Gaps = 49/420 (11%)
Query: 81 GAVSACASRGDARSGKEIHGRMYRSGLELNSH--VSNCLINMYGKCGLLSSAQFVFDASL 138
G + S D GK H R+ LE N + N LI+MY KCG L+ A+ VFD
Sbjct: 51 GFLRDAISTSDLMLGKCTHARIL--ALEENPERFLVNNLISMYSKCGSLTYARRVFDKMP 108
Query: 139 ERNSISWVSLLSSYCQCGEHV-----HGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
ER+ +SW S+L++Y Q E V +F + R+ V S + + +L C G +
Sbjct: 109 ERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 168
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
H K L+ D FVA L+N+Y K K+ +F + D+ W+ ++ Y
Sbjct: 169 CASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAY 228
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
++G EAIDL +SGL P+E+T + D E
Sbjct: 229 LEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEA------------------- 269
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDE----HDVVSWNALIAGHLASCHYGEAIELLKD 369
+K+F+ ++ +++S N +++G+L + Y ++ D
Sbjct: 270 -----------------GQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMD 312
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M+ + T+ +L + + ++ G+Q HC +K G D + + ++L++MY K +
Sbjct: 313 MVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRK 372
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ AR VF+++S ++L+SWN+++ G AQ L EA+ ++ + +KP+ T VL A
Sbjct: 373 IGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKA 432
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 37/307 (12%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+L +G H+ + ++F+ LI++Y+KC L A RVF + DL +W++++
Sbjct: 61 DLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILA 120
Query: 252 GYAQLGKAC-----EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
YAQ + EA LF + + S +T S +L H K
Sbjct: 121 AYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACK 180
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
+G FVA +++ Y K ++E F+EM DVV WN ++ +L EAI+L
Sbjct: 181 IGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 240
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
G PN T + IS D E G+ VK F++
Sbjct: 241 SSAFHTSGLHPNEITLRLLSRISGDDS--EAGQ------VK-SFENG------------- 278
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
NDA V ++S N +L GY G L+ + M E+ ++ + TFI V
Sbjct: 279 ----NDASAV------SEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILV 328
Query: 487 LSACVHI 493
L+ V +
Sbjct: 329 LATAVRL 335
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I SG+ ++ + +L MYVK ++ AQ FD +P + ++W+ LISG + G E AL
Sbjct: 551 IKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERAL 610
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F M + P+ +T A + G++IH + + V L++MY
Sbjct: 611 HVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMY 670
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A +F N +W ++L Q GE L++F G+ + +
Sbjct: 671 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFI 730
Query: 182 SVLGACA 188
VL AC+
Sbjct: 731 GVLSACS 737
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
GK TH I+ + + + L+ MY+KCG L AR+VFD + ++LVSWN++L YAQ
Sbjct: 65 GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQ 124
Query: 458 HGLG-----REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV--EEGWHYFNSMIRDH 510
G +EA ++ +++++ + + T +L C+H G V E +H + I
Sbjct: 125 SSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLD 184
Query: 511 GISPRMDHIA-SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G D +A ++V+++ G+ + + P + V+W +L
Sbjct: 185 GD----DFVAGALVNIYLKFGKVKEGRVLFEEMPYR-DVVLWNLMLKA 227
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 198/570 (34%), Positives = 315/570 (55%), Gaps = 1/570 (0%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
R +IH R+ SGL+ N + L+N G + A+ +FD + W +++ SY
Sbjct: 70 RHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSY 129
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
+ + ++++ R +GV F+ VL AC L + + IH + K D
Sbjct: 130 SRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDV 189
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
FV GL+ LYAKC + +A VF + + +W+++I GYAQ GKA EA+ +F +M ++
Sbjct: 190 FVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNN 249
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G+ P + +L A+ DV + GR +H +IKMG + ++ FY+KC L+ +
Sbjct: 250 GVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVA 309
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
FD+M +V+ WNA+I+G+ + H EA+ L M+ P+ T + + S+ +
Sbjct: 310 KSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQV 369
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
++E + + K + S++ + ++L+DMYAKCG + AR+VFD S K++V W+ M+
Sbjct: 370 GSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMI 429
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
+GY HG G EA+ +Y +M++ + PND TFIG+L+AC H GLV+EGW F+ M +D I
Sbjct: 430 MGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEI 488
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
PR +H + VV L G A FI PIEP VW LLS CK ++ + LG YAA
Sbjct: 489 VPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAAN 548
Query: 573 KILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
K+ S DP +T ++ LSN+YA + +WD A VR +M+EK L KD G S E+ K+ F
Sbjct: 549 KLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFH 608
Query: 633 TSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+ ++ + + +L L + G+VP
Sbjct: 609 VGDKSHPMAKEIFDELQRLERRLKEVGFVP 638
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 206/433 (47%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG N L+ +I A+KLFDE +V W+A+I +S+ M
Sbjct: 79 LVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDT 138
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ +R M + P+ +T+ + AC D IHG++ + G + V N L+ +
Sbjct: 139 VEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVAL 198
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A+ VFD R +SW S++S Y Q G+ V L++F R +GV +
Sbjct: 199 YAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIAL 258
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L A + +L+ G IH V K LE + + + L YAKC + +A F ++
Sbjct: 259 VSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKT 318
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+A+I GYA+ G A EA++LF M S + P VT + A A V + +
Sbjct: 319 TNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWM 378
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
+ K + S FV +++D Y+KC +E + + FD + DVV W+A+I G+
Sbjct: 379 DDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQG 438
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EAI L M G PN T+ +L + ++ G + C+ S +
Sbjct: 439 WEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRNEHYSCV 498
Query: 421 VDMYAKCGRLNDA 433
VD+ + G L +A
Sbjct: 499 VDLLGRAGYLGEA 511
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 206/627 (32%), Positives = 347/627 (55%), Gaps = 8/627 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G NV + L+ MY K S+++ A+++F+ + ERN++ W+A++ GF+Q G+ + +
Sbjct: 336 IKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVM 395
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+F M +P+ +T+ SACAS G ++H M ++ N V+N L++MY
Sbjct: 396 EFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMY 455
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR--KSGVAISEFS 179
K G L A+ F+ +++SW +++ Y Q E + F+ R +GV E S
Sbjct: 456 AKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQ--EEYNDEAFFMFRRMVSNGVLPDEVS 513
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
AS++ ACA + K G Q H L+ K L+ LI++Y KC + A VF ++
Sbjct: 514 LASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMP 573
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ + +ALI GY + EAI LF ++ GL P+EVTF+ +L GRQ
Sbjct: 574 YRNVVSINALIAGYT-MSHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQ 632
Query: 300 LHSLIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLAS 357
+H ++K GF SS V ++L Y + +S F E+ +V W ALI+G+
Sbjct: 633 IHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQ 692
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
H+ +A++ + M + P+ T++++L + + +++ G++ H I GF+ + +
Sbjct: 693 NHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITC 752
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKN-LVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
S+L+DMYAKCG + + +VF + +N ++SWN+M+VG A++G EALEI+ M++ I
Sbjct: 753 SSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSI 812
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P++ TF+GVLSAC H G V EG F+ M+ ++ + PR+DH+ +V + G A
Sbjct: 813 IPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAE 872
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
EFI + + ++W LL C+ H D V G+ AA K++ P+ +S++++LS +YAE+
Sbjct: 873 EFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLMELKPQSSSSYVLLSGLYAESE 932
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTE 623
W +R+ MK K +KK G SW E
Sbjct: 933 NWSGADSLRREMKLKGVKKLPGYSWIE 959
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 174/561 (31%), Positives = 298/561 (53%), Gaps = 8/561 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M G P+ I ++ YV R+ DA+KLF ++P NV++W+ +ISG ++ G E A
Sbjct: 234 MQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEA 293
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+++F + L+ + +SA AS G +H + + GL+ N +V + L+NM
Sbjct: 294 ISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNM 353
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + +A+ VF++ ERN + W ++L + Q G ++ F ++ G EF+
Sbjct: 354 YAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTF 413
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+ ACA L L G Q+H+++ K + FVA L+++YAK L A + F +++
Sbjct: 414 TSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKI 473
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +W+A+I GY Q EA +F +M S+G++P EV+ + ++ A A+VKE G+Q
Sbjct: 474 HDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQC 533
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L++K+G + T ++++D Y KC ++ + F M +VVS NALIAG+ S H
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMS-HL 592
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF-DSNVVIGSA 419
EAI L +++ G P T++ +L+ + G+Q H ++K GF S+ ++ +
Sbjct: 593 EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVS 652
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+ MY R D+ +F L K LV W ++ GYAQ +AL+ Y M+ + I P
Sbjct: 653 LLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILP 712
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI--ASVVHLFACRGQTRRAY 536
+ TF VL AC + ++ G +S+I G + MD I +S++ ++A G + +
Sbjct: 713 DQATFASVLRACAGMSSLQTG-QEVHSLIFHTGFN--MDEITCSSLIDMYAKCGDVKGSL 769
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
+ P + + W ++ G
Sbjct: 770 QVFHEMPRRNSVISWNSMIVG 790
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/475 (31%), Positives = 247/475 (52%), Gaps = 36/475 (7%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY K + DA+ +FD + +SW+ LI+G+ + G P A+ F
Sbjct: 183 LIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFD---------- 232
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
+M R G + +IN Y G L+ A+ +F
Sbjct: 233 -------------------------KMQRVGHVPDQIALVTVINAYVALGRLADARKLFT 267
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
N ++W ++S + + G + FL +K+G+ + S SVL A A L L
Sbjct: 268 QIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNY 327
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +H+ K L+ + +V L+N+YAKC K+D A +VF+++ ++ W+A++GG+AQ
Sbjct: 328 GSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQ 387
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G A E ++ F M G P E TF+ + A A + G QLH+++IK F+S FV
Sbjct: 388 NGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFV 447
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
AN ++D Y+K L+E+ K F+ M HD VSWNA+I G++ + EA + + M+ G
Sbjct: 448 ANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGV 507
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+ + ++I++ +++ + G+Q HC +VK G D++ GS+L+DMY KCG + AR
Sbjct: 508 LPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARD 567
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
VF + +N+VS N ++ GY L EA+ ++ +Q +KP + TF G+L C
Sbjct: 568 VFYSMPYRNVVSINALIAGYTMSHL-EEAIHLFQEIQMVGLKPTEVTFAGLLDGC 621
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 253/486 (52%), Gaps = 35/486 (7%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N ++ +YVK ++ AQK F + +++V +W++++S + G+ + F M +
Sbjct: 80 NVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVR 139
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN +T+ +SAC+ D GK++H +++ G S LI+MY KC L A+ V
Sbjct: 140 PNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLV 199
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD +L +++SW +L++ Y + G + +K+F ++ G + + +V+ A
Sbjct: 200 FDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINA------- 252
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+VA+G +L A ++F+ I P++ AW+ +I G+
Sbjct: 253 -------------------YVALG---------RLADARKLFTQIPNPNVVAWNVMISGH 284
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
A+ G A EAI F+++ +GL + + VL A A + G +H+ IK G
Sbjct: 285 AKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNV 344
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+V + +++ Y+KC ++ + + F+ + E ++V WNA++ G + E +E M
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRH 404
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G P+ +T+++I + + + +++G Q H ++K F SN+ + +ALVDMYAK G L +A
Sbjct: 405 GPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEA 464
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
RK F+ + + VSWN ++VGY Q EA ++ M N + P++ + ++SAC ++
Sbjct: 465 RKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV 524
Query: 494 GLVEEG 499
++G
Sbjct: 525 KEFKQG 530
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/467 (29%), Positives = 233/467 (49%), Gaps = 43/467 (9%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
+ K IH + + G+ L + N ++++Y KCG + AQ F +++ +W S+LS Y
Sbjct: 59 TAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYL 118
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
G ++ F+ GV +EF+ A VL AC+ L ++ G Q+H VFK F F
Sbjct: 119 DHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSF 178
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
GLI++YAKC L A VF D +W+ LI GY + G EA+ +F KM G
Sbjct: 179 CQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVG 238
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+P ++ V+ A+ + GR L ++
Sbjct: 239 HVPDQIALVTVINAYVAL-----GR------------------------------LADAR 263
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
K F ++ +VV+WN +I+GH EAI ++ G + ++L+ + +
Sbjct: 264 KLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLS 323
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+ +G H +K G D NV +GSALV+MYAKC +++ A++VF+ L +N+V WN ML
Sbjct: 324 MLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLG 383
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
G+AQ+GL +E +E +S M+ + +P++ TF + SAC + ++ G MI++ +
Sbjct: 384 GFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNK-FT 442
Query: 514 PRMDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ ++V ++A G + R+ +EF+K I N V W ++ G
Sbjct: 443 SNLFVANALVDMYAKSGALKEARKQFEFMK---IHDN-VSWNAIIVG 485
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 140/470 (29%), Positives = 245/470 (52%), Gaps = 18/470 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + F N+ N L+ MY K + +A+K F+ M + +SW+A+I G+ Q + A
Sbjct: 436 MIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEA 495
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
FR MV + P+ + VSACA+ + + G++ H + + GL+ ++ + LI+M
Sbjct: 496 FFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDM 555
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYC--QCGEHVHGLKIFLLSRKSGVAISEF 178
Y KCG++ +A+ VF + RN +S +L++ Y E +H +F + G+ +E
Sbjct: 556 YVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHLEEAIH---LFQEIQMVGLKPTEV 612
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ A +L C L +G QIH V K L + V + L+ +Y ++ + +FS
Sbjct: 613 TFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSE 672
Query: 238 IQLPD-LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+Q P L W+ALI GYAQ +A+ + M S ++P + TF+ VL A A +
Sbjct: 673 LQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQT 732
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHD-VVSWNALIAGHL 355
G+++HSLI GF+ ++++D Y+KC ++ SL+ F EM + V+SWN++I G
Sbjct: 733 GQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLA 792
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV-----KPGF 410
+ + EA+E+ K M + P+ T+ +L+ S + G++ +V +P
Sbjct: 793 KNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRV 852
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG 459
D +G +VD+ + G LN+A + + L K + + W+T+L +HG
Sbjct: 853 DH---LG-CMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHG 898
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 171/373 (45%), Gaps = 43/373 (11%)
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
AVL L IHS K + + +++LY KC +D A + FS ++ D+ AW+
Sbjct: 52 AVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWN 111
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+++ Y G + FV M++ G+ P+E TF+ VL A + +++ G+Q+H + KM
Sbjct: 112 SVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKM 171
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
GF +F ++D Y+KC L ++ FD D VSW LIAG++ EA+++
Sbjct: 172 GFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVF 231
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M GH P+ ++N Y
Sbjct: 232 DKMQRVGHVPDQIALVTVIN-----------------------------------AYVAL 256
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
GRL DARK+F + + N+V+WN M+ G+A+ G EA+ + +++ +K ++ VL
Sbjct: 257 GRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVL 316
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMD---HIASVVHLFACRGQTRRAYEFIKSSPI 544
SA + ++ G SM+ I +D ++ S + + A + + +S
Sbjct: 317 SAIASLSMLNYG-----SMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLG 371
Query: 545 EPNKVVWRCLLSG 557
E N V+W +L G
Sbjct: 372 ERNIVLWNAMLGG 384
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 153/320 (47%), Gaps = 9/320 (2%)
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+ +HS +K+G + N ++D Y KC ++ + K F +++ DV +WN++++ +L
Sbjct: 61 KVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDH 120
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+ ++ M G PN +T++ +L+ S + I +GKQ HC + K GF
Sbjct: 121 GLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQ 180
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
L+DMYAKC L DAR VFD + + VSW T++ GY + G EA++++ MQ
Sbjct: 181 GGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHV 240
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ + V++A V +G + + F + +P + ++ A RG A
Sbjct: 241 PDQIALVTVINAYVALGRLADARKLFTQI-----PNPNVVAWNVMISGHAKRGFAEEAIS 295
Query: 538 F---IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYA-AEKILSTDPEDTSAHIMLSNVYA 593
F +K + ++ + +LS + L G A+ I ++ L N+YA
Sbjct: 296 FFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYA 355
Query: 594 EANMWDETAKVRKIMKEKSL 613
+ + D +V + E+++
Sbjct: 356 KCSKMDAAKQVFNSLGERNI 375
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 7/186 (3%)
Query: 375 HCPNLYTYSNILNISSD--IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
HC + + N+ N + A+ K H +K G ++G+ +VD+Y KCG ++
Sbjct: 36 HCRRIQAH-NLFNEKPKAVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDF 94
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A+K F L K++ +WN++L Y HGL ++ + M + ++PN+ TF VLSAC
Sbjct: 95 AQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSG 154
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFIKSSPIEPNKVVW 551
+ + G + + G R ++ ++A CR R + + + V W
Sbjct: 155 LQDINYGKQVHCGVFK-MGFGFRSFCQGGLIDMYAKCR--NLRDARLVFDGALNLDTVSW 211
Query: 552 RCLLSG 557
L++G
Sbjct: 212 TTLIAG 217
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 207/667 (31%), Positives = 350/667 (52%), Gaps = 36/667 (5%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H N ++ N ++ YVK + +A+KLFD M ER ++W+ LI G+SQ+ + A F
Sbjct: 75 HKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQ 134
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M C EP+Y T+V +S C ++ ++ + G + V N L++ Y K
Sbjct: 135 MQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNR 194
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A CQ +F K I F+ A+VL A
Sbjct: 195 LDLA----------------------CQ---------LF----KEMPEIDSFTFAAVLCA 219
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
L ++ +G QIHS V K ++ FV+ L++ Y+K + + A ++F + D ++
Sbjct: 220 NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSY 279
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ +I GYA GK A DLF ++ + + F+ +L ++ + GRQ+H+ I
Sbjct: 280 NVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIV 339
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
S V N+++D Y+KC EE+ F + V W A+I+ ++ Y E ++L
Sbjct: 340 TTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQL 399
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M + T++++L S+ I ++ GKQ H I+K GF SNV GSAL+D+YAK
Sbjct: 400 FNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAK 459
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + DA + F + +N+VSWN M+ YAQ+G L+ + M + ++P+ +F+GV
Sbjct: 460 CGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGV 519
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC H GLVEEG +FNSM + + + PR +H ASVV + G+ A + + PI+P
Sbjct: 520 LSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDP 579
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP-EDTSAHIMLSNVYAEANMWDETAKVR 605
++++W +L+ C+ HK+ L R AA+++ + + D + ++ +SN+YA A W+ +KV
Sbjct: 580 DEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVH 639
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPI 665
K M+++ +KK SW E++++ H FS + Q ++ + ++ L+ + + GY PD
Sbjct: 640 KAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTS 699
Query: 666 YSSHFEE 672
+ H E+
Sbjct: 700 CALHNED 706
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 231/463 (49%), Gaps = 12/463 (2%)
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
I R+ ++G + ++ SN + + K G LS A+ +F+ +N++S ++S Y + G
Sbjct: 34 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 93
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
K+F V + + ++G + L K ++ + +C E D +
Sbjct: 94 LGEARKLF----DGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPD---YVT 146
Query: 218 LINLYAKCEKLDLASRVFS-NIQLPDLTAWSALIGGYAQLGKACEA--IDLFVKMFSSGL 274
+ L + C ++ +++ Q+ L S LI G + C++ +DL ++F
Sbjct: 147 FVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP 206
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
TF+ VL A + + + G+Q+HS +IK F FV+N +LDFYSK + + ++ K
Sbjct: 207 EIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARK 266
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
FDEM E D VS+N +I+G+ + A +L +++ F + ++ +L+I+S+
Sbjct: 267 LFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLD 326
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
E G+Q H + DS +++G++LVDMYAKCG+ +A +F +L+ ++ V W M+
Sbjct: 327 WEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISA 386
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
Y Q G E L++++ M++ + + TF +L A I + G +S I G
Sbjct: 387 YVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLG-KQLHSFIIKSGFMS 445
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ ++++ ++A G + A + + P + N V W ++S
Sbjct: 446 NVFSGSALLDVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMISA 487
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/613 (32%), Positives = 326/613 (53%), Gaps = 3/613 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV--CCVLE 73
LL Y + A+ + D P + ++ ++ G A+ R M C
Sbjct: 61 LLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAA 120
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
A+ AC D R G+ +H + ++G + V N L++MY K G L +A+ V
Sbjct: 121 QADVVLSLALKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKV 179
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD ERN +SW S+LS Q G GL +F R+ V SE++ SVL ACA+LG L
Sbjct: 180 FDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGL 239
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
G IH V K L + F++ L+++YAKCEK++ A RVF ++ D+ W+A+I GY
Sbjct: 240 HQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGY 299
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q + +A+ LF+ ++P+ VT + V+ A A ++ GR +H++ +K+G
Sbjct: 300 TQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESD 359
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V N ++D Y+KC+ L E+ F + DVV+WN+++AG+ + E++ L M +
Sbjct: 360 VVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQ 419
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G P+ + N L+ + + GK H +K F SN+ + +AL+++Y+KC L A
Sbjct: 420 GISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSA 479
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
++VF+ ++ +N V+W+ M+ GY G ++++++ M + I PN+ F +LSAC H
Sbjct: 480 QRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHT 539
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G+V G YF+SM R I+P M H A +V + A G A EFI++ PI+ VW
Sbjct: 540 GMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGS 599
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
L GCK H L G A +K+ + PE ++++SN+Y WD++ +R+ M+E+ L
Sbjct: 600 FLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGL 659
Query: 614 KKDTGCSWTELQN 626
K GCS +N
Sbjct: 660 VKLPGCSSVGHEN 672
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 311/573 (54%), Gaps = 1/573 (0%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
G +HG + + G V N LI+ Y K + A VFD +R+ ISW S++
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
G + +++F+ G + + SV+ AC +G +H + L + +
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
L+++Y+ C +++F N++ ++ +W+A+I Y + G + LF +M G+
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
P + L AFA + G+ +H I+ G VAN +++ Y KC +EE+
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
FD + + D +SWN LI G+ S EA L +ML + PN T + IL ++ + +
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLR-PNAVTMACILPAAASLSS 301
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
+E G++ H V+ G+ + + +ALVDMY KCG L AR++FD L++KNL+SW M+ G
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
Y HG GR+A+ ++ M+ + I+P+ +F +L AC H GL +EGW +FN+M +H I P
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKI 574
++ H A +V L G + AYEFI++ PIEP+ +W LL GC+ H+++ L AE +
Sbjct: 422 KLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMV 481
Query: 575 LSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTS 634
+PE+T +++L+N+YAEA W+ K++ + + L+++TGCSW E++ K H F
Sbjct: 482 FELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAE 541
Query: 635 RFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
QG+ + E ++ ++ + + G+ P Y+
Sbjct: 542 NRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYA 574
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 195/386 (50%), Gaps = 1/386 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF N L+ Y K +RI DA +FDEMP+R++ISW+++I G + G+ + A
Sbjct: 10 LVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKA 69
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M E + T + + AC + G +HG R+GL + + N L++M
Sbjct: 70 VELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDM 129
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y C S +F ++N +SW ++++SY + G +F G+ F+
Sbjct: 130 YSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAI 189
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S L A A +LK G +H + +E VA L+ +Y KC ++ A +F ++
Sbjct: 190 TSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTK 249
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +W+ LIGGY++ A EA LF +M L P+ VT + +L A A + GR++
Sbjct: 250 KDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREM 308
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++ G+ FVAN ++D Y KC L + + FD + +++SW +IAG+
Sbjct: 309 HAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRG 368
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNIL 386
+AI L + M G P+ ++S IL
Sbjct: 369 RDAIALFEQMKGSGIQPDAGSFSAIL 394
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 204/653 (31%), Positives = 346/653 (52%), Gaps = 5/653 (0%)
Query: 4 SGFHPNVITYNHLLLMYVK-FS-RINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
SG ++ N++L Y K FS +N A KLFDEMP ++ ++W+ +I+G+ + G A
Sbjct: 28 SGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAW 87
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ + M + + YT+ + A G+++H + + G E + + + L++MY
Sbjct: 88 EFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMY 147
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + A VF RN +SW +L+ + Q G+ + +K GV + + + A
Sbjct: 148 AKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFA 207
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN-IQL 240
+L K+ MQ+H + K LEF + + Y++C L+ A RVF +
Sbjct: 208 PLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGT 267
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL W++++ Y K +A +LF++M G P T++ V+ A G+
Sbjct: 268 RDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSF 327
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKC--ELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
H+L+IK G + N ++ Y K + +E +L F M D VSWN+++ G
Sbjct: 328 HALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMG 387
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+A++L M + Y YS +L SD+ ++ G+Q H VK GFDSN + S
Sbjct: 388 FSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVAS 447
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+L+ MY+KCG + DA K F+ + ++ ++WN+++ YAQHG G AL+++S+M+E ++K
Sbjct: 448 SLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKL 507
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ VL+AC H+GLVE+G SM D+GI PRM+H A V LF G A
Sbjct: 508 DHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKAL 567
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I S P +PN +V + LL C+ ++ L A ++L +PE+ +++LSN+Y W
Sbjct: 568 IDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHLKRW 627
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
D+ A V ++M+E+ +KK G SW E++N++H F + D+++++ +L
Sbjct: 628 DDKASVTRLMRERKVKKVPGWSWIEVKNEVHAFKAEDRSHPYSEDVYQILGEL 680
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 211/406 (51%), Gaps = 5/406 (1%)
Query: 99 HGRMYRSGLELNSHVSNCLINMYGKC--GLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
H + ++SG+ + +V+N ++ Y KC G L+ A +FD +++++W ++++ Y + G
Sbjct: 22 HCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESG 81
Query: 157 EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
+ ++ G ++ S+L A +G Q+HSL+ K E +
Sbjct: 82 NLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGS 141
Query: 217 GLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
L+++YAKCE+++ A VF + + + +W+ALI G+ Q+G A L M G+
Sbjct: 142 ALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRV 201
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
+ TF+ +L K QLH IIK G + + N L YS+C LLE++ + F
Sbjct: 202 EDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVF 261
Query: 337 D-EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
D + D+V+WN+++ +L +A L +M G P++YTY+ +++
Sbjct: 262 DGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHK 321
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR--LNDARKVFDHLSSKNLVSWNTMLV 453
+GK H ++K G + +V I +AL+ MY K + A +F + SK+ VSWN++L
Sbjct: 322 NYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILT 381
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
G++Q G +AL+++ M+ + + +D + VL +C + +++ G
Sbjct: 382 GFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLG 427
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 245/500 (49%), Gaps = 21/500 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ +V + LL MY K R+ DA +F MP RN +SW+ALI GF Q+G + A
Sbjct: 128 IVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTA 187
Query: 61 LNYFRLMVCCVLEPNYY---TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
F L+ C E T+ ++ + ++H ++ + GLE + + N
Sbjct: 188 ---FWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNAT 244
Query: 118 INMYGKCGLLSSAQFVFDASL-ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+ Y +CGLL A+ VFD ++ R+ ++W S+L +Y + +FL + G
Sbjct: 245 LTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPD 304
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC--EKLDLASRV 234
++ V+ AC + G H+LV K LE + LI +Y K + ++ A +
Sbjct: 305 IYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNL 364
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F +++ D +W++++ G++Q+G + +A+ LF M SS + +S VL + +D+
Sbjct: 365 FHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAIL 424
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G+Q+H L +K GF S FVA++++ YSKC ++E++ K F++ + ++WN+++ +
Sbjct: 425 QLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAY 484
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-----G 409
A++L M + T+ +L S + +E G+ C++K G
Sbjct: 485 AQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGR----CVLKSMESDYG 540
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIY 468
+ + VD++ + G L +A+ + D + N + T+L G A ++
Sbjct: 541 IPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVA 600
Query: 469 SMMQENKIKPNDNTFIGVLS 488
S + E ++P ++ +LS
Sbjct: 601 SQLLE--VEPEEHCTYVILS 618
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 115/219 (52%), Gaps = 13/219 (5%)
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKC--ELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
H K G S +VAN +L YSKC L + K FDEM D V+WN +I G++ S
Sbjct: 22 HCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESG 81
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ G A E LK M G + YT+ +IL + + G+Q H IVK G++ +V GS
Sbjct: 82 NLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGS 141
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAKC R+ DA VF + +N VSWN ++ G+ Q G A + MQ+ ++
Sbjct: 142 ALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRV 201
Query: 479 NDNTFIGVLSAC-----------VHIGLVEEGWHYFNSM 506
D TF +L+ +H +++ G ++N++
Sbjct: 202 EDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNAL 240
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKC--GRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
THC K G S++ + + ++ Y+KC G LN A K+FD + K+ V+WNTM+ GY +
Sbjct: 21 THCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVES 80
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
G A E M+ + + TF +L H + G +S+I G +
Sbjct: 81 GNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLG-QQVHSLIVKIGYEQSVYA 139
Query: 519 IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++++ ++A + AY+ + P+ N V W L+ G
Sbjct: 140 GSALLDMYAKCERVEDAYDVFQGMPVR-NFVSWNALIDG 177
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 219/740 (29%), Positives = 362/740 (48%), Gaps = 108/740 (14%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +GF+ + LL MY S DA +FD+M +N+ SW+A++ +G+
Sbjct: 58 IKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGF 117
Query: 62 NYFRLMVCCVL--EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
F +C L + +++ + ++ C GD G+++HG + + G N +V N LI+
Sbjct: 118 MLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALID 177
Query: 120 MYGKCGLLSSAQFVFD-----------------------------------ASLERNSIS 144
MYGKCG L A+ V + + LE N ++
Sbjct: 178 MYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVT 237
Query: 145 WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF 204
W +++ + V +++F +GVA + ASVL AC+ + L VG ++H +
Sbjct: 238 WSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIV 297
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
+ L + FVA L+ +Y +C + A ++FS +++ +I GY + G +A +
Sbjct: 298 RHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKE 357
Query: 265 LFVKM------------------------FSSGLM-----------PSEVTFSYVLGAFA 289
LF +M F LM P T +L FA
Sbjct: 358 LFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFA 417
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
D+ G+++HS+ I G S +FV +++ Y KC + + FDE+ E D +WNA
Sbjct: 418 DMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNA 477
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL-------------------NISS 390
LI+G+ G+ EL++ M +G PN+YT+++IL +SS
Sbjct: 478 LISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSS 537
Query: 391 DIP----------------AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P I GKQ H ++ G+DS+ IG+ LVDMYAKCG +
Sbjct: 538 LRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCY 597
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+V++ +S+ NLV N ML YA HG G E + I+ M +++++P+ TF+ VLS+CVH G
Sbjct: 598 QVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAG 657
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
++ G+ F ++ + I+P + H +V L + G+ AY+ IK+ P+E + V W L
Sbjct: 658 SIKIGYECF-YLMETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSAL 716
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
L GC HK++ LG AAEK++ +P +T +++L+N+YA A W + AK R++M +K ++
Sbjct: 717 LGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQ 776
Query: 615 KDTGCSWTELQNKMHYFSTS 634
K GCSW E ++ +H F S
Sbjct: 777 KSPGCSWIEDRDGVHIFLAS 796
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 213/484 (44%), Gaps = 72/484 (14%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
GK++H ++G ++ V L+ MY A +FD +N SW ++L +
Sbjct: 50 GKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLN 109
Query: 155 CGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
G G +F L G + F VL C LG+L++G Q+H +V K +
Sbjct: 110 MGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNV 169
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQL-------------------------------- 240
+V LI++Y KC LD A +V +
Sbjct: 170 YVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLS 229
Query: 241 ---PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
P++ WSA+IGG++ E+++LF +M +G+ P T + VL A + +K G
Sbjct: 230 ELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVG 289
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF--------------------- 336
++LH I++ S FVAN ++ Y +C ++ + K F
Sbjct: 290 KELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLEN 349
Query: 337 --------------DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
E E D +SWN +I+GH+ + + +A+ L +D+L EG P+ +T
Sbjct: 350 GNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTL 409
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+IL +D+ I GK+ H + G SN +G ALV+MY KC + A+ FD +S
Sbjct: 410 GSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISE 469
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
++ +WN ++ GYA+ + E+ M+ + +PN T+ +L+ V +
Sbjct: 470 RDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQL 529
Query: 503 FNSM 506
FN M
Sbjct: 530 FNEM 533
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 126/229 (55%), Gaps = 3/229 (1%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+QLHS IK GF + FV +L YS E++ FD+M ++ SW A++ HL
Sbjct: 50 GKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLN 109
Query: 357 SCHYGEAIELLKDMLFEGHCPNL--YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ + L ++ L +G L + + +LNI + +E G+Q H ++K GF +NV
Sbjct: 110 MGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNV 169
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+G+AL+DMY KCG L++A+KV + ++ K+ VSWN+++ +G+ EAL++ M +
Sbjct: 170 YVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLS 229
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV 523
+++PN T+ V+ E F M+ G++P +ASV+
Sbjct: 230 ELEPNVVTWSAVIGGFSSNAYDVESVELFARMV-GAGVAPDARTLASVL 277
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/484 (37%), Positives = 290/484 (59%), Gaps = 2/484 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SVL C ++ G ++H+ + K E ++ LI LY KC L A RV +
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 541
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ +W+A+I GY+Q G A EA+ LFV+M SG P+E TF+ VL + GRQ+H
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 601
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
SL+IK F S FV +++LD Y+K + E+ + FD + E DVVS A+I+G+
Sbjct: 602 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 661
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA++L + + EG N TY+++L S + A++ G+Q H +++ VV+ ++L+
Sbjct: 662 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLI 721
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM-QENKIKPND 480
DMY+KCG L +R++FD + + ++SWN MLVGY++HGLGREA+E++ +M +ENK+KP+
Sbjct: 722 DMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDS 781
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMI-RDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ VLS C H G+ + G F M+ + G P ++H VV LF G+ A+EFI
Sbjct: 782 VTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFI 841
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
K P EP +W LL C+ H+++ +G + A ++L + E+ +++LSN+YA A WD
Sbjct: 842 KKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWD 901
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ VR++MKEK++ K+ G SW EL +H F S + + ++ + +LS+ + + G
Sbjct: 902 DVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAG 961
Query: 660 YVPD 663
YVP+
Sbjct: 962 YVPE 965
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 196/365 (53%), Gaps = 3/365 (0%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
LE + Y ++ C S+ R G+ +H M ++ E ++ LI +Y KC L A+
Sbjct: 473 LEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDAR 532
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
V D ERN +SW +++S Y Q G L +F+ SG A +EF+ A+VL +C
Sbjct: 533 RVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSS 592
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
++G QIHSLV K + E FV L+++YAK K+ A RVF + D+ + +A+I
Sbjct: 593 GFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIIS 652
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
GYAQLG EA+DLF ++ G+ + VT++ VL A + + GRQ+HS +++
Sbjct: 653 GYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPF 712
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
+ + N+++D YSKC L S + FD M E V+SWNA++ G+ EA+EL K M
Sbjct: 713 YVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMK 772
Query: 372 FEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIV--KPGFDSNVVIGSALVDMYAKCG 428
E P+ T+ +L+ S + G + +V K GF+ + +VD++ + G
Sbjct: 773 EENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAG 832
Query: 429 RLNDA 433
R+ +A
Sbjct: 833 RVEEA 837
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 240/510 (47%), Gaps = 59/510 (11%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + + P V L+++Y K + DA+++ DEMPERNV+SW+A+ISG+SQ G A
Sbjct: 503 MIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEA 562
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ PN +T+ +++C S + G++IH + ++ E + V + L++M
Sbjct: 563 LHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDM 622
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+ VFD ER+ +S +++S Y Q G L +F ++ G+ + +
Sbjct: 623 YAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTY 682
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASVL A + L L G Q+HS V + L F + LI++Y+KC L + R+F ++
Sbjct: 683 ASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPE 742
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+A++ GY++ G EA++LF M + P VTF VL + GG +
Sbjct: 743 RTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSH-----GGME 797
Query: 300 LHSLII-------KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALI 351
L I K GF V+D + + +EE+ + +M E W +L
Sbjct: 798 DRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSL- 856
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
L +C + + + + + +L I S+
Sbjct: 857 ---LGACRVHQNVHIGE-----------FVARRLLEIESENAG----------------- 885
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV-----SW----NTMLVGYAQHGLGR 462
N VI L ++YA GR +D R V + + K ++ SW T+ +A
Sbjct: 886 -NYVI---LSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHP 941
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVH 492
E+++ ++E IK + ++ LS ++
Sbjct: 942 RKEEVFAKVRELSIKIKEAGYVPELSCVLY 971
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%)
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
C + E L +M +G Y ++L AI G++ H ++K ++ V +
Sbjct: 456 CSNRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLR 515
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ L+ +Y KC L DAR+V D + +N+VSW M+ GY+Q G EAL ++ M +
Sbjct: 516 TRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTA 575
Query: 478 PNDNTFIGVLSACV 491
PN+ TF VL++C
Sbjct: 576 PNEFTFATVLTSCT 589
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 206/623 (33%), Positives = 341/623 (54%), Gaps = 2/623 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N L+ Y R DA+++FDEMP R+++SW++L+S GM E A M+
Sbjct: 146 DVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMM 205
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ N + V V AC + D G +HG + +SGL+ ++ N L++MYGK G L
Sbjct: 206 RSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLE 265
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
S+ VF+ E+N +SW S L + G H L++F + + V + +S+L A
Sbjct: 266 SSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALV 325
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
LG +G ++H + A+E D F+A L+++YAK L+ AS +F NI+ ++ +W+A
Sbjct: 326 DLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNA 385
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I AQ G EA L ++M +G P+ T +L A + V G+Q+H+ I
Sbjct: 386 MIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRS 445
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
S FV+N ++D Y+KC L + FD E D VS+N LI G+ S E++ L +
Sbjct: 446 LMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQSQCCFESLHLFQ 504
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M G + ++ L+ +++ A + GK+ H +V+ +++ + ++L+D+Y K G
Sbjct: 505 QMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGG 564
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
L A K+F+ ++ K++ SWNTM++GY HG A E++ +M+++ + + ++I VLS
Sbjct: 565 MLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLS 624
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H GLV+ G YF+ MI + I P+ H A +V L GQ + E I + P N
Sbjct: 625 ACSHGGLVDRGKKYFSQMIAQN-IKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANS 683
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
VW LL C+ H D+ L R AAE + PE + + +L N+Y+E+ MW+E +++ +M
Sbjct: 684 DVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEANEIKTLM 743
Query: 609 KEKSLKKDTGCSWTELQNKMHYF 631
K + ++K+ SW + NK+ F
Sbjct: 744 KSRKVQKNPAYSWVQSGNKLQAF 766
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 151/503 (30%), Positives = 259/503 (51%), Gaps = 13/503 (2%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPER--NVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
LLL Y I A+ + P R + W++L + G+P AL + MV +
Sbjct: 44 LLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRALASAGLPSEALRVYNCMVRSGVR 103
Query: 74 PNYYTYVGAV-----SACASRGDARSGKEIHGRMYRSGLEL-NSHVSNCLINMYGKCGLL 127
P+ T+ A+ + A G E+H R GL L + N L+ Y G
Sbjct: 104 PDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFYAARGRA 163
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+ A+ VFD R+ +SW SL+S+ G + + +SG+ ++ S SV+ AC
Sbjct: 164 ADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPAC 223
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLASRVFSNIQLPDLTA 245
+ G+ +H LV K L D V +G L+++Y K L+ + RVF+ +Q + +
Sbjct: 224 GTERDEGFGLSVHGLVLKSGL--DSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVS 281
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W++ +G +A G + +++F M + P VT S +L A D+ G+++H I
Sbjct: 282 WNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSI 341
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
+ S F+AN+++D Y+K LE++ F+ ++ +VVSWNA+IA + EA
Sbjct: 342 RRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFS 401
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L+ +M G CPN +T N+L S + +++ GKQ H + S++ + +AL+D+YA
Sbjct: 402 LVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYA 461
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KCG+L+ A+ +FD S K+ VS+NT++VGY+Q E+L ++ M+ I+ + +F+G
Sbjct: 462 KCGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMG 520
Query: 486 VLSACVHIGLVEEGWHYFNSMIR 508
LSAC ++ ++G ++R
Sbjct: 521 CLSACANLSAFKQGKEIHGVLVR 543
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 241/470 (51%), Gaps = 5/470 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG V N L+ MY KF + + ++F+ M E+N +SW++ + F+ G E
Sbjct: 239 VLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDV 298
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR+M + P T + A G GKE+HG R +E + ++N L++M
Sbjct: 299 LEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDM 358
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A +F+ RN +SW +++++ Q G + + +K+G + F+
Sbjct: 359 YAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTL 418
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++L AC+ + ++K+G QIH+ +L D FV+ LI++YAKC +L +A +F +
Sbjct: 419 VNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEK 478
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D++ ++ LI GY+Q E++ LF +M S+G+ V+F L A A++ G+++
Sbjct: 479 DDVS-YNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEI 537
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H ++++ ++ F+AN++LD Y+K +L + K F+ + DV SWN +I G+
Sbjct: 538 HGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQI 597
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A EL M +G + +Y +L+ S ++ GK+ ++ + + +
Sbjct: 598 DVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQNIKPQQMHYACM 657
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALE 466
VD+ + G+L+++ ++ ++ N W +L HG L R A E
Sbjct: 658 VDLLGRAGQLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAE 707
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 137/276 (49%), Gaps = 13/276 (4%)
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL-----GAFADVKETIGGRQL 300
W++L A G EA+ ++ M SG+ P + TF + L A+ + G +L
Sbjct: 74 WNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAEL 133
Query: 301 HSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H+ ++ G + F NT++ FY+ ++ + FDEM D+VSWN+L++ L +
Sbjct: 134 HAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGM 193
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A + M+ G N+ + +++ +G H ++K G DS V +G+A
Sbjct: 194 LEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNA 253
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMY K G L + +VF+ + KN VSWN+ L +A G + LE++ +M E+++ P
Sbjct: 254 LVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPG 313
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
T +L A V +G YF+ HG S R
Sbjct: 314 SVTLSSLLPALVDLG-------YFHLGKEVHGYSIR 342
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 196/630 (31%), Positives = 332/630 (52%), Gaps = 3/630 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V T N++L Y K + A LFDEMP R+ +SW+ +I+G G E + +
Sbjct: 28 GTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVL 87
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R M C E + YT+ + A G G+++H + + G N + + L++MY KC
Sbjct: 88 RCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKC 147
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L A F + + N++SW ++++ Y Q G+ + + G + + + A +L
Sbjct: 148 EKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLL 207
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF-SNIQLPDL 243
+ Q+H + K LE + LI Y+KC LD A R+F S+ + DL
Sbjct: 208 PLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDL 267
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W++L+ Y + A L + M G P +++ ++ A + + GR LH L
Sbjct: 268 VTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGL 327
Query: 304 IIKMGFSSFTFVANTVLDFYSKCEL--LEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+IK GF ++N ++ Y K + ++E+L F+ ++ D VSWN+++ G +
Sbjct: 328 VIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSE 387
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A++ M + Y++S +L SD+ + G+Q H +K G +SN + S+L+
Sbjct: 388 DAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLI 447
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
MY+KCG + DAR+ F+ S + ++WN ++ GYAQHG AL+++ +M+ K+K +
Sbjct: 448 FMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHI 507
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL+AC HIGLVE+G + M D+G+ PRM+H A V L+ G+ A I+
Sbjct: 508 TFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEE 567
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P +P+ VW+ L C++ ++ L A +L +PE+ +++LSN+Y WDE
Sbjct: 568 MPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEK 627
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
AKV+++MKE+ +KK G SW E+ N +H F
Sbjct: 628 AKVKRLMKERGVKKVPGWSWIEVNNNVHAF 657
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 229/469 (48%), Gaps = 11/469 (2%)
Query: 99 HGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
H + G + + N ++N Y KC L SA +FD R+S+SW ++++ + CG
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80
Query: 159 VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
+ R G + ++ S+L A G +G Q+HS++ K + + L
Sbjct: 81 EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140
Query: 219 INLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE 278
+++YAKCEKL+ A F +I + +W+A+I GYAQ G A L M G +
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200
Query: 279 VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD- 337
T++ +L D QLH IIK G + N ++ YSKC L+++ + FD
Sbjct: 201 GTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDS 260
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
D+V+WN+L+A +L A +LL DM G P+LY+Y++I++ +
Sbjct: 261 SAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNN 320
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKC--GRLNDARKVFDHLSSKNLVSWNTMLVGY 455
G+ H ++K GF+ +V I +AL+ MY K G + +A +F+ L K+ VSWN++L G
Sbjct: 321 GRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGL 380
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
+Q G +A++ + M+ + + +F VL +C + + G + + +G+
Sbjct: 381 SQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLG-QQIHVLALKYGLESN 439
Query: 516 MDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+S++ +++ G RR++E + + + W L+ G H
Sbjct: 440 EFVSSSLIFMYSKCGIIEDARRSFE----EASKNSSITWNALMFGYAQH 484
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 231/460 (50%), Gaps = 11/460 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ NV + LL MY K ++ DA F + + N +SW+A+I+G++Q G E A
Sbjct: 125 IIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETA 184
Query: 61 LNYFRLMVCCVLEPNYY---TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
F L+ C E TY + ++HG++ + GLEL + + N L
Sbjct: 185 ---FWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNAL 241
Query: 118 INMYGKCGLLSSAQFVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
I Y KCG L A+ +FD+S R+ ++W SLL++Y + K+ + ++ G
Sbjct: 242 ITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPD 301
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE--KLDLASRV 234
+S S++ AC G +H LV K E ++ LI++Y K + + A +
Sbjct: 302 LYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCI 361
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F +++ D +W++++ G +Q G + +A+ F+ M S+ + +FS VL + +D+
Sbjct: 362 FESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATF 421
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G+Q+H L +K G S FV+++++ YSKC ++E++ ++F+E ++ ++WNAL+ G+
Sbjct: 422 QLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGY 481
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSN 413
A++L M + + T+ +L S I +E G K C G
Sbjct: 482 AQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPR 541
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTML 452
+ + VD+Y + GRL +A+ + + + K + W T L
Sbjct: 542 MEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFL 581
>gi|297722687|ref|NP_001173707.1| Os03g0840400 [Oryza sativa Japonica Group]
gi|255675038|dbj|BAH92435.1| Os03g0840400 [Oryza sativa Japonica Group]
Length = 1632
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 199/638 (31%), Positives = 342/638 (53%), Gaps = 7/638 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ + + P + N+LL +Y + + A+ LFD MP R+ +SW+ LI+G+S +G +A
Sbjct: 1 MLRAAYRPGLFLRNNLLALYCRCGDMRHARLLFDGMPRRDAVSWNTLIAGYSGLGSCRLA 60
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR + +T+ A+++CA GD R G+ +HG SGL + ++N +I+M
Sbjct: 61 LDAFRDARASGDGVDRFTFAAALASCARVGDWRDGRVVHGLAVVSGLARTAFLTNSVIDM 120
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG++ + +FD + ER SW LLS+Y + G + + + +SGV + F+
Sbjct: 121 YAKCGMIDEVRLLFDRAEERGEASWNLLLSAYVRMGWPEVAVNVLVWMHRSGVKLDSFAL 180
Query: 181 ASVLGACAVLGNLK-VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+L AC+ LG+ + V +HS V K L+ D FV ++++YAK L+ A +VF I
Sbjct: 181 GGILKACSELGDSEDVRRMLHSCVVKVGLDLDVFVGSAMVDMYAKNGGLEEAIKVFDCIP 240
Query: 240 LPDLTAWSALIGGYAQLGK-AC-----EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
++ ++A+I G+A+LG C EA+ LF M + PS+ TF VL
Sbjct: 241 NQNVVVYNAMIAGFARLGNDPCPEIRIEAVTLFSNMLKKRIKPSKFTFKSVLEVCNLTNA 300
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
GRQ+H+ +I G F+A+ +++ YSK + +SL+ FD + DV W ++I
Sbjct: 301 VRCGRQIHAHVILSGLQGDEFIASVLINLYSKARCVNDSLRCFDMTVKEDVFIWTSMITA 360
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ + H+ +A+ L +++L+ + +T S++++ + + KQ HC VK G D
Sbjct: 361 FVQNEHFEKALYLFRELLYTRKGTDQFTISSVMSACAALSVPTTCKQIHCHAVKTGLDQF 420
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V G++ + MY G L +++ F+ +S + SW+ M++ YA HG +ALE++ M+
Sbjct: 421 TVSGNSQIAMYRNIGDLKASKQTFEQISCLDTFSWSAMILSYAVHGYESKALELFEKMKN 480
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+ N++ + L AC H GL +EG Y+ + I D G S + A +V L G+
Sbjct: 481 LGVMMNESASLAALIACSHQGLGDEGLRYYENTIPDDGFSLDVKLKACMVDLLGRVGKIA 540
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A +FI SS E + ++W LL C+ H D EK++ +P S+++ML N+Y
Sbjct: 541 DAEDFIMSSGSENDPILWHALLRACRVHGDKERCTKIGEKLMELEPFSASSYVMLYNLYM 600
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+A + R +M+E+ + + G SWT+ +H F
Sbjct: 601 DAGKISLAMRTRGLMRERGISNEAGISWTDFGGSIHNF 638
>gi|357114751|ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 695
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 195/654 (29%), Positives = 362/654 (55%), Gaps = 16/654 (2%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P V+ L +K + DA LFD MP +N+++W++ +SG ++ G PE A+ F M
Sbjct: 25 PEVVHDCKRLDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADM 84
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
V + PN + + A++ACA R+G+++H R+G +S V + L+ +Y +CG L
Sbjct: 85 VASGVAPNDFAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDL 144
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+A+ VFD + + + SL+S++C+ GE + + GV +E + AS+LG+C
Sbjct: 145 GAAKGVFDRMESPDVVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSC 204
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDK--FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
+G Q+H+ + K + + + LI+ Y++ + D+A VF+N+ ++
Sbjct: 205 C---PFVLGEQVHAYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVT 261
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLM-PSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W +++ + + G+ +A+ +F M S G++ P+E FS LGA + GRQLHS
Sbjct: 262 WCSMMQLHIRDGRPEDALQVFDDMISEGVVEPNEFAFSIALGACGSIAL---GRQLHSSA 318
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK +S V+N +L Y + ++E +++ D+VSW I+ + + +AI
Sbjct: 319 IKRNLTSDLRVSNALLSMYGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGFSEKAI 378
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
LL + G PN Y +S+ L+ +D+ ++ G+Q HC +K G D + G+AL+++Y
Sbjct: 379 ALLSMLHSRGLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLGCDLKICTGNALINLY 438
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK-IKPNDNTF 483
+KCG++ A+ FD + +++ SWN+++ GYAQHG AL+++ M+ + +P++++F
Sbjct: 439 SKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSF 498
Query: 484 IGVLSACVHIGLVEEGWHYFNSMI--RDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
+GVL+AC H G+V EG F ++ HG +P H A VV + G+ A ++
Sbjct: 499 LGVLAACNHAGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDDALRLVEE 558
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS----TDPEDTSAHIMLSNVYAEANM 597
P P ++W+ LL+ C+ H +L G AAE+++ + D+++++++S ++A
Sbjct: 559 MPFRPGALIWKTLLASCRLHGNLETGELAAERLMELSEGGEDRDSASYVLMSGIHAMRGE 618
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
W + +VR+ M E ++K+ GCSW E+ N++H F + +++++ +L
Sbjct: 619 WRDAYRVRRRMDEAGVRKEAGCSWVEVHNEVHTFVARDKSHPDSASIYQILWEL 672
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 226/466 (48%), Gaps = 14/466 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + + L+ +Y + + A+ +FD M +V+ +++L+S F + G E+A+
Sbjct: 120 VRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPDVVGYTSLVSAFCRSGEFELAV 179
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNS-HVSNCLIN 119
+ M+ +EPN +T + +C G+++H M ++ GL S + S+ LI+
Sbjct: 180 DTLHQMLRQGVEPNEHTMASILGSCCP---FVLGEQVHAYMIKAMGLHSQSMYASSALID 236
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA-ISEF 178
Y + A+ VF+ +N ++W S++ + + G L++F GV +EF
Sbjct: 237 FYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRPEDALQVFDDMISEGVVEPNEF 296
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ + LGAC G++ +G Q+HS K L D V+ L+++Y + + V +I
Sbjct: 297 AFSIALGAC---GSIALGRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQELEAVLKDI 353
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ PD+ +W+ I Q G + +AI L + S GLMP++ FS L + AD+ GR
Sbjct: 354 ENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCADLALLDQGR 413
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q H L +K+G N +++ YSKC + + FD MD DV SWN+LI G+
Sbjct: 414 QFHCLALKLGCDLKICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYAQHG 473
Query: 359 HYGEAIELLKDML-FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV---KPGFDSNV 414
A+++ +M G P+ ++ +L + + G I + G +
Sbjct: 474 DASMALQVFGEMRSIRGTEPDESSFLGVLAACNHAGMVNEGVALFRAIASHSQHGATPSP 533
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG 459
+ +VDM + GR +DA ++ + + + + W T+L HG
Sbjct: 534 SHYACVVDMMGRSGRFDDALRLVEEMPFRPGALIWKTLLASCRLHG 579
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 213/656 (32%), Positives = 335/656 (51%), Gaps = 75/656 (11%)
Query: 82 AVSACASRGDAR--SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS-- 137
A+S C S A ++ H + R L ++ ++ L++ Y LS+ Q S
Sbjct: 4 ALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSH 63
Query: 138 LERNSI-SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
L ++ S+ SL+ ++ + H L F + F S + +CA L L G
Sbjct: 64 LPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPG 123
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
Q+H+ D VA L ++Y KC+++ A ++F + D+ WSA+I GY++L
Sbjct: 124 QQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRL 183
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD-------------------------- 290
G EA +LF +M S G+ P+ V+++ +L F +
Sbjct: 184 GLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTV 243
Query: 291 ---------VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
+++ + G Q+H +IK G S FV + +LD Y KC ++E + FDE++E
Sbjct: 244 SCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEE 303
Query: 342 HDVVSWNALIAGH-------------------------------LASCHYG----EAIEL 366
++ S NA + G +ASC EA+EL
Sbjct: 304 MEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALEL 363
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+DM G PN T +++ +I A+ GK+ HC ++ G +V +GSAL+DMYAK
Sbjct: 364 FRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAK 423
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CGR+ AR+ FD +S+ NLVSWN ++ GYA HG +E +E++ MM ++ KP+ TF V
Sbjct: 424 CGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCV 483
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC GL EEGW +NSM +HGI P+M+H A +V L + G+ AY IK P EP
Sbjct: 484 LSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEP 543
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+ VW LLS C+ H +L LG AAEK+ +P + +I+LSN+YA +WDE ++R+
Sbjct: 544 DACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIRE 603
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+MK K L+K+ G SW E+ +K+H + Q D+ E +++L++ + GY+P
Sbjct: 604 VMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLP 659
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 192/422 (45%), Gaps = 72/422 (17%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
SGF + I + L MY+K RI DA+KLFD MP+R+V+ WSA+I+G+S++G+ E A
Sbjct: 132 ASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKE 191
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRG-------------------------------- 90
F M +EPN ++ G ++ + G
Sbjct: 192 LFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVG 251
Query: 91 ---DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF------------- 134
D G ++HG + + GL + V + +++MYGKCG + VF
Sbjct: 252 CLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNA 311
Query: 135 ----------------------DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
D +E N ++W S+++S Q G+ + L++F + G
Sbjct: 312 FLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYG 371
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
V + + S++ AC + L G +IH + + D +V LI++YAKC ++ LA
Sbjct: 372 VEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLAR 431
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
R F + +L +W+A++ GYA GKA E +++F M SG P VTF+ VL A A
Sbjct: 432 RCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNG 491
Query: 293 ETIGG-RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNAL 350
T G R +S+ + G ++ S+ LEE+ EM E D W AL
Sbjct: 492 LTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGAL 551
Query: 351 IA 352
++
Sbjct: 552 LS 553
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 216/493 (43%), Gaps = 72/493 (14%)
Query: 32 LFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGD 91
L +P + S+S+LI F++ L F + L P+ + A+ +CAS
Sbjct: 60 LSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRA 119
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
G+++H SG +S V++ L +MY KC + A+ +FD +R+ + W ++++
Sbjct: 120 LDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAG 179
Query: 152 YCQCGEHVHGLKIFLLSRKSGV----------------------AISEF----------- 178
Y + G ++F R GV A+ F
Sbjct: 180 YSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPD 239
Query: 179 --SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+ + VL A L ++ VG Q+H V K L DKFV ++++Y KC + SRVF
Sbjct: 240 GSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFD 299
Query: 237 NIQLPDL-----------------------------------TAWSALIGGYAQLGKACE 261
++ ++ W+++I +Q GK E
Sbjct: 300 EVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLE 359
Query: 262 AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
A++LF M + G+ P+ VT ++ A ++ + G+++H ++ G +V + ++D
Sbjct: 360 ALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALID 419
Query: 322 FYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYT 381
Y+KC ++ + + FD+M ++VSWNA++ G+ E +E+ ML G P+L T
Sbjct: 420 MYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVT 479
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
++ +L+ + E G + + + + G + + + LV + ++ G+L +A + +
Sbjct: 480 FTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEM 539
Query: 441 S-SKNLVSWNTML 452
+ W +L
Sbjct: 540 PFEPDACVWGALL 552
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 37/287 (12%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER--------------------- 39
+I G + + +L MY K + + ++FDE+ E
Sbjct: 266 VIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTA 325
Query: 40 --------------NVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSA 85
NV++W+++I+ SQ G AL FR M +EPN T + A
Sbjct: 326 LEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPA 385
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
C + GKEIH R G+ + +V + LI+MY KCG + A+ FD N +SW
Sbjct: 386 CGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSW 445
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH-SLVF 204
+++ Y G+ +++F + +SG + VL ACA G + G + + S+
Sbjct: 446 NAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSE 505
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALI 250
+ +E L+ L ++ KL+ A + + PD W AL+
Sbjct: 506 EHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALL 552
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 219/664 (32%), Positives = 356/664 (53%), Gaps = 3/664 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERN-VISWSALISGFSQIGMPEV 59
+I G+ V N L+ MY K + I A+KLFD M ERN V+SW+++IS +S G
Sbjct: 36 IIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCME 95
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL FR M + N YT V A+ AC + G EIH + +S L+ +V+N L+
Sbjct: 96 ALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVA 155
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
M+ + G +S A +FD E+++I+W S+++ + Q G + L+ F + + + E S
Sbjct: 156 MHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVS 215
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L A LG L G +IH+ K L+ + + LI++Y+KC + A VF +
Sbjct: 216 LISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMI 275
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
DL +W+ +I YAQ EA+ L K+ + G+ + L A + ++ ++
Sbjct: 276 NKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKE 335
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +K G S + N ++D Y+ C + + + F+ + DVVSW ++I+ ++ +
Sbjct: 336 VHGYTLKRGLSDL-MMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGL 394
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA+ + M P+ T +IL+ ++ + A+ GK+ H I + GF ++
Sbjct: 395 ANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNS 454
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMYA CG L +A KVF SK+LV W TM+ Y HG G+ A+E++S+M++ K+ P+
Sbjct: 455 LVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPD 514
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ +L AC H GL+ EG +M + + P +H A +V L AY F+
Sbjct: 515 HITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFV 574
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
KS IEP VW L C+ H + LG AA+K+L DP+ +++++SNV+A + W
Sbjct: 575 KSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWK 634
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL-FDG 658
+ +VR MK LKK+ GCSW E+ NK+H F + + +++ + Q++ L +G
Sbjct: 635 DVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEG 694
Query: 659 GYVP 662
GYVP
Sbjct: 695 GYVP 698
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 255/486 (52%), Gaps = 4/486 (0%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
+T+ + AC D G EIHG + + G + V+N L++MY KC + A+ +FD
Sbjct: 11 FTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDR 70
Query: 137 SLERNS-ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
ERN +SW S++S+Y G+ + L +F +K+GV + ++ + L AC K+
Sbjct: 71 MNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKL 130
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
GM+IH+ + K D +VA L+ ++ + K+ A+R+F + D W+++I G+ Q
Sbjct: 131 GMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQ 190
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G EA+ F + + L P EV+ +L A + + G+++H+ +K S +
Sbjct: 191 NGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRI 250
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
NT++D YSKC + + FD+M D++SW +IA + + + EA++LL+ + +G
Sbjct: 251 GNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGM 310
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
+ + L S + + K+ H +K G S++++ + ++D+YA CG +N A +
Sbjct: 311 DVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATR 369
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+F+ + K++VSW +M+ Y +GL EAL ++ +M+E ++P+ T + +LSA +
Sbjct: 370 MFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSA 429
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+ +G + R G + S+V ++AC G AY+ + + V+W ++
Sbjct: 430 LNKGKEIHGFIFRK-GFMLEGSTVNSLVDMYACCGSLENAYKVFICTR-SKSLVLWTTMI 487
Query: 556 SGCKTH 561
+ H
Sbjct: 488 NAYGMH 493
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 208/422 (49%), Gaps = 14/422 (3%)
Query: 169 RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
R GV F+ VL AC V+ ++ G +IH L+ KC + FVA L+++YAKC +
Sbjct: 2 RVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDI 61
Query: 229 DLASRVFSNI-QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
A ++F + + D+ +W+++I Y+ G+ EA+ LF +M +G+ + T L A
Sbjct: 62 LGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQA 121
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
D G ++H+ I+K +VAN ++ + + + + + FDE+DE D ++W
Sbjct: 122 CEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITW 181
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
N++IAG + Y EA++ + P+ + +IL S + + GK+ H +K
Sbjct: 182 NSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMK 241
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
DSN+ IG+ L+DMY+KC + A VFD + +K+L+SW T++ YAQ+ EAL++
Sbjct: 242 NWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKL 301
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA 527
+Q + + L AC + + ++ G+S M ++ ++A
Sbjct: 302 LRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLK-RGLSDLMMQ-NMIIDVYA 359
Query: 528 CRGQ---TRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL---VLGRYAAEKILSTDPED 581
G R +E IK + V W ++S C H L LG + K S +P+
Sbjct: 360 DCGNINYATRMFESIKCKDV----VSWTSMIS-CYVHNGLANEALGVFYLMKETSVEPDS 414
Query: 582 TS 583
+
Sbjct: 415 IT 416
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 200/669 (29%), Positives = 358/669 (53%), Gaps = 2/669 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G H ++ + L + + ++LF+++ + ++ ++ LI GFS G+P+ +
Sbjct: 37 LILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSS 96
Query: 61 LN-YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ Y L L P+ +TY A+SA + D R G +H G+ N V + +++
Sbjct: 97 IFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVD 156
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y K A+ VFD ER+++ W +++S + + +++F+ G++ +
Sbjct: 157 LYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTT 216
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
A+VL A A L ++GM I L K L D +V GLI+LY+KC K +F I
Sbjct: 217 LATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQID 276
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PDL +++A+I GY + A+ LF ++ +SG + T ++ + R
Sbjct: 277 QPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRL 336
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+ +L +K+G V+ + Y + ++ + + FDE E + SWNA+I+G+ +
Sbjct: 337 IQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGL 396
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
AI L ++M+ + PN T ++IL+ + + A+ GK H I +SNV + +A
Sbjct: 397 TDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTA 455
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMYAKCG + +AR++FD + KN+V+WN M+ GY HG G+EAL+++ M ++ I P
Sbjct: 456 LVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPT 515
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ +L AC H GLV EG F+SM ++G P +H A +V + GQ A EFI
Sbjct: 516 GVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFI 575
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ P+EP VW LL C HK+ + A++++ DPE+ +++LSN+Y+ +
Sbjct: 576 ERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFP 635
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ A VR+++K++ L K GC+ E+ ++ + F++ + Q + E++ +L+ + + G
Sbjct: 636 KAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAG 695
Query: 660 YVPDPIYSS 668
Y + + ++
Sbjct: 696 YQAETVTTA 704
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 189/583 (32%), Positives = 333/583 (57%), Gaps = 7/583 (1%)
Query: 87 ASRGDARSGKEIHGRMY-RSGLELNSHVS--NCLINMYGKCGLLSSAQFVFDASLERNSI 143
A+ R GK IH ++ R+ +S ++ N LIN+Y KCG A+ +FD L+RN +
Sbjct: 34 ATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVV 93
Query: 144 SWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS 201
SW +L+ Y GE + L +F L+S S +E+ VL CA G +K G Q H
Sbjct: 94 SWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYP-NEYIFTIVLSCCADSGRVKEGKQCHG 152
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACE 261
+ K L ++V LI++Y++C +D A ++ + D+ ++++++ + G E
Sbjct: 153 YLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGE 212
Query: 262 AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
A + +M ++ VT+ VLG A +++ G Q+H+ ++K G FV++T++D
Sbjct: 213 AAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLID 272
Query: 322 FYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYT 381
Y KC + + K FD + + +VV+W A++ +L + H+ E + L M E PN +T
Sbjct: 273 TYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFT 332
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
++ +LN + + A+ +G H IV GF +++++G+AL++MY+K G ++ + VF ++
Sbjct: 333 FAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMM 392
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
++++++WN M+ GY+ HGLG++AL ++ M PN TFIGVLSACVH+ LV+EG++
Sbjct: 393 NRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFY 452
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP-IEPNKVVWRCLLSGCKT 560
YF+ +++ + P ++H +V L G A F+K++ ++ + V WR LL+ C
Sbjct: 453 YFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHI 512
Query: 561 HKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCS 620
H++ LG+ E ++ DP D + +LSN++A+A WD K+RK+MKE+++KK+ G S
Sbjct: 513 HRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGAS 572
Query: 621 WTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
W +++N H F + + + E + QL + GY PD
Sbjct: 573 WLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPD 615
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 244/482 (50%), Gaps = 21/482 (4%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
++ N L+ +Y K + A+KLFD M +RNV+SWSAL+ G+ G L FR +V
Sbjct: 60 DITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLV 119
Query: 69 CC-VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
PN Y + +S CA G + GK+ HG + +SGL L+ +V N LI+MY +C +
Sbjct: 120 SLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHV 179
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
SA + D + S+ S+LS+ + G ++ V + SVLG C
Sbjct: 180 DSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLC 239
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A + +L++G+QIH+ + K L FD FV+ LI+ Y KC ++ A + F ++ ++ AW+
Sbjct: 240 AQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWT 299
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A++ Y Q G E ++LF KM P+E TF+ +L A A + G LH I+
Sbjct: 300 AVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMS 359
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---EAI 364
GF + V N +++ YSK ++ S F M DV++WNA+I G+ H+G +A+
Sbjct: 360 GFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGY---SHHGLGKQAL 416
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-----PGFDSNVVIGSA 419
+ +DM+ G CPN T+ +L+ + ++ G I+K PG + +
Sbjct: 417 LVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHY----TC 472
Query: 420 LVDMYAKCGRLNDARKVFDHLSSK--NLVSWNTMLVG---YAQHGLGREALEIYSMMQEN 474
+V + + G L++A + ++V+W T+L + + LG++ E M +
Sbjct: 473 MVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPH 532
Query: 475 KI 476
+
Sbjct: 533 DV 534
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 185/374 (49%), Gaps = 31/374 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG + N L+ MY + ++ A ++ D +P +V S+++++S + G A
Sbjct: 154 LLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEA 213
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ MV + + TYV + CA D + G +IH ++ ++GL + VS+ LI+
Sbjct: 214 AQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDT 273
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG + +A+ FD +RN ++W ++L++Y Q G L +F +EF+
Sbjct: 274 YGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTF 333
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L ACA L L G +H + + V LIN+Y+K +D + VFSN+
Sbjct: 334 AVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMN 393
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+A+I GY+ G +A+ +F M S+G P+ VTF VL A +
Sbjct: 394 RDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSAC-----------V 442
Query: 301 HSLIIKMGFSSF-----TFVANTVLDFYS-------KCELLEES---LKTFDEMDEHDVV 345
H +++ GF F F L+ Y+ + LL+E+ +KT ++ + DVV
Sbjct: 443 HLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQV-KWDVV 501
Query: 346 SWNALIAGHLASCH 359
+W L L +CH
Sbjct: 502 AWRTL----LNACH 511
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 323/599 (53%), Gaps = 31/599 (5%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYC 153
K++H ++ R+ L S +S ++++Y LL + +F++ +++W S++ Y
Sbjct: 24 AKQLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYT 82
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
G +H L F+ SG SVL +C ++ +L+ G +H + + + FD +
Sbjct: 83 SHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLY 142
Query: 214 VAMGLINLYAKCEKLDLAS-----------------------------RVFSNIQLPDLT 244
L+N+Y+K L+ + +VF + D+
Sbjct: 143 TCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIV 202
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ +I G AQ G +A+ + +M ++ L P T S VL FA+ + G+++H
Sbjct: 203 SWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYA 262
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
I+ G+ + F+ ++++D Y+KC +++S + F + +HD +SWN++IAG + + + E +
Sbjct: 263 IRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGL 322
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+ + ML PN ++S+I+ + + + GKQ H I++ FD NV I SALVDMY
Sbjct: 323 KFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMY 382
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG + AR +FD + ++VSW M++GYA HG +A+ ++ M+ +KPN F+
Sbjct: 383 AKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFM 442
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
VL+AC H GLV+E W YFNSM +D+ I P ++H A+V L G+ AYEFI I
Sbjct: 443 AVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHI 502
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP VW LL+ C+ HK++ L ++K+ + DP++ A+++LSN+Y+ A W + K+
Sbjct: 503 EPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKL 562
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
R M++K +KK CSW E++NK+H F + ++E + L + GYV D
Sbjct: 563 RIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLD 621
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 228/488 (46%), Gaps = 42/488 (8%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEVALNYFRL 66
P+ + +L +Y + ++D+ +F+ +P ++W ++I ++ G+ +L++F
Sbjct: 37 PSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQ 96
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK--- 123
M+ P++ + + +C D R G+ +HG + R G+ + + N L+NMY K
Sbjct: 97 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 156
Query: 124 --------------------------CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
L S + VF+ +R+ +SW +++S Q G
Sbjct: 157 LEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGM 216
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
H L + + + F+ +SVL A NL G +IH + + D F+
Sbjct: 217 HEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSS 276
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
LI++YAKC ++D + RVF + D +W+++I G Q G E + F +M + + P+
Sbjct: 277 LIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPN 336
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
V+FS ++ A A + G+QLH II+ F F+A+ ++D Y+KC + + FD
Sbjct: 337 HVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFD 396
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE- 396
+M+ +D+VSW A+I G+ H +AI L K M EG PN + +L S ++
Sbjct: 397 KMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDE 456
Query: 397 ----WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD--HLSSKNLVSWNT 450
+ T + PG + +A+ D+ + GRL +A + H+ V W+T
Sbjct: 457 AWKYFNSMTQDYRIIPGLEHY----AAVADLLGRVGRLEEAYEFISDMHIEPTGSV-WST 511
Query: 451 MLVGYAQH 458
+L H
Sbjct: 512 LLAACRVH 519
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 182/370 (49%), Gaps = 17/370 (4%)
Query: 30 QKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASR 89
+K+F+ MP+R+++SW+ +ISG +Q GM E AL R M L P+ +T + A
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
+ GKEIHG R+G + + + + LI+MY KC + + VF + + ISW S++
Sbjct: 250 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 309
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ Q G GLK F + + + S +S++ ACA L L +G Q+H + + +
Sbjct: 310 AGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFD 369
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
+ F+A L+++YAKC + A +F ++L D+ +W+A+I GYA G A +AI LF +M
Sbjct: 370 GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM 429
Query: 270 FSSGLMPSEVTFSYVLGA-----FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
G+ P+ V F VL A D I G + VA D
Sbjct: 430 EVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVA----DLLG 485
Query: 325 KCELLEESLKTFDEMDEHDVVS-WNALIAGHLASCHYGEAIELLKDM---LFEGHCPNLY 380
+ LEE+ + +M S W+ L LA+C + IEL + + LF N+
Sbjct: 486 RVGRLEEAYEFISDMHIEPTGSVWSTL----LAACRVHKNIELAEKVSKKLFTVDPQNIG 541
Query: 381 TYSNILNISS 390
Y + NI S
Sbjct: 542 AYVLLSNIYS 551
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 135/255 (52%), Gaps = 6/255 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +G+ +V + L+ MY K +R++D+ ++F +P+ + ISW+++I+G Q GM + L
Sbjct: 263 IRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGL 322
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+F+ M+ ++PN+ ++ + ACA GK++HG + RS + N +++ L++MY
Sbjct: 323 KFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMY 382
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + +A+++FD + +SW +++ Y G + +F GV + +
Sbjct: 383 AKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFM 442
Query: 182 SVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+VL AC+ G + + + + ++ + + A+ +L + +L+ A S++
Sbjct: 443 AVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVA--DLLGRVGRLEEAYEFISDM 500
Query: 239 QL-PDLTAWSALIGG 252
+ P + WS L+
Sbjct: 501 HIEPTGSVWSTLLAA 515
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I S F NV + L+ MY K I A+ +FD+M +++SW+A+I G++ G A
Sbjct: 363 IIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDA 422
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM---YR--SGLELNSHVSN 115
++ F+ M ++PNY ++ ++AC+ G + M YR GLE + V++
Sbjct: 423 ISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVAD 482
Query: 116 CLINMYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
L G+ G L A +F+ D +E W +LL++
Sbjct: 483 LL----GRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 515
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 183/596 (30%), Positives = 330/596 (55%), Gaps = 12/596 (2%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
YV + C G + + +HG M ++G + V+ L+N Y +CG A+ +FD
Sbjct: 81 YVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMP 140
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
ERN ++W +L++ Y + GL++F+ + G S ++ + L AC ++ +G Q
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H K E + L +LYAK LD A R F I ++ W+ +I A+ +
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEE 260
Query: 259 ACE-AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
E + LF+ M G+MP+E T + V+ + G+Q+ + K+G + V N
Sbjct: 261 CVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKN 320
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL-----------ASCHYGEAIEL 366
+ + Y + +E+++ F++M++ +++WNA+I+G+ A +A+ +
Sbjct: 321 STMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTI 380
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+D+ P+L+T+S+IL++ S + A+E G+Q H +K GF S+VV+ SALV+MY K
Sbjct: 381 FRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNK 440
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + DA K F + ++ V+W +M+ GY+QHG +EA++++ M+ ++PN+ TF+ +
Sbjct: 441 CGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSL 500
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC + GLVEE HYF+ M +++ I P +DH ++ +F G+ A+ FIK + EP
Sbjct: 501 LSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEP 560
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
N+ +W L++GC++H ++ L YAA+K+L P+ +I+L N+Y W + A+VRK
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRK 620
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+MK++ + SW +++K+++F + Q +L++++ L GY P
Sbjct: 621 LMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEP 676
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 252/509 (49%), Gaps = 29/509 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M +G ++ L+ Y++ DA++LFD MPERNV++W+AL++G++ P +
Sbjct: 104 MAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALG 163
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ P++YT ++AC + D GK++HG + G E + + N L ++
Sbjct: 164 LEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSL 223
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH-GLKIFLLSRKSGVAISEFS 179
Y K G L SA F E+N I+W +++S+ + E V GL +F+ GV +EF+
Sbjct: 224 YAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFT 283
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV+ C +L +G Q+ + FK E + V + LY + + D A R+F ++
Sbjct: 284 LTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQME 343
Query: 240 LPDLTAWSALIGGYAQL-----------GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
+ W+A+I GYAQ+ + +A+ +F + S + P TFS +L
Sbjct: 344 DASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVC 403
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ + G Q+H+ IK GF S V + +++ Y+KC ++++ K F EM V+W
Sbjct: 404 SAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWT 463
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-------KQT 401
++I+G+ EAI+L ++M G PN T+ ++L+ S +E K+
Sbjct: 464 SMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKE 523
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGL 460
+C ++P D ++DM+ + GR+ DA N W++++ G H
Sbjct: 524 YC--IEPVVDHY----GCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSH-- 575
Query: 461 GREALEIYSMMQENKIKPND-NTFIGVLS 488
G L Y+ + ++KP T+I +L+
Sbjct: 576 GNMELAFYAADKLLELKPKGIETYILLLN 604
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 193/406 (47%), Gaps = 22/406 (5%)
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G A+ +L C +G+L +H + K D FVA L+N Y +C A
Sbjct: 73 GKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDA 132
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
R+F + ++ W+AL+ GY + +++FV+M G PS T L A
Sbjct: 133 RRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLAS 192
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
+ G+Q+H IK G S T + N++ Y+K L+ +L+ F + E +V++W +I
Sbjct: 193 CDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMI 252
Query: 352 AGHLASCHYGE-----AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
++C E + L DML +G PN +T ++++++ + GKQ
Sbjct: 253 ----SACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 308
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ--------- 457
K G ++N+ + ++ + +Y + G ++A ++F+ + ++++WN M+ GYAQ
Sbjct: 309 KIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 368
Query: 458 --HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
G +AL I+ ++ + +KP+ TF +LS C + +E+G I+ +S
Sbjct: 369 QARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDV 428
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ + +++V+++ G + A + P V W ++SG H
Sbjct: 429 VVN-SALVNMYNKCGCIQDANKAFLEMPTR-TFVTWTSMISGYSQH 472
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 2/196 (1%)
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
ML EG Y +L+ ++ ++ + H + K G +++ + ++LV+ Y +CG
Sbjct: 69 MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGA 128
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
DAR++FD + +N+V+W ++ GY + LE++ M E P+ T L+A
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C+ V+ G I+ +G S+ L+A G A P E N +
Sbjct: 189 CLASCDVDLGKQVHGYAIK-YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKNVI 246
Query: 550 VWRCLLSGCKTHKDLV 565
W ++S C ++ V
Sbjct: 247 TWTTMISACAEDEECV 262
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 187/577 (32%), Positives = 339/577 (58%), Gaps = 9/577 (1%)
Query: 95 GKEIHGR-MYRSGLELNSHVS--NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
GK +H + + R+ +SH+S N L+++Y KCG L A+ +FDA RN +SW L++
Sbjct: 31 GKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAG 90
Query: 152 YCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
Y G H+ L +F ++S ++ +E+ + L AC+ G +K GMQ H L+FK L
Sbjct: 91 YLHGGNHLEVLVLFKNMVSLQNACP-NEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLV 149
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNI---QLPDLTAWSALIGGYAQLGKACEAIDLF 266
++V L+++Y++C ++LA +V + + D+ ++++++ + G+ EA+++
Sbjct: 150 CHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVL 209
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
+M + VT+ V+G A +++ G ++H+ +++ G FV + ++D Y KC
Sbjct: 210 RRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKC 269
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
+ + FD + +VV W AL+ +L + ++ E++ L M EG PN YT++ +L
Sbjct: 270 GEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLL 329
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
N + I A+ G H + K GF ++V++ +AL++MY+K G ++ + VF + ++++
Sbjct: 330 NACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDII 389
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
+WN M+ GY+ HGLG++AL+++ M + PN TFIGVLSA H+GLV+EG++Y N +
Sbjct: 390 TWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHL 449
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVL 566
+R+ I P ++H +V L + G A F+K++ ++ + V WR LL+ C H++ L
Sbjct: 450 MRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDL 509
Query: 567 GRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
GR AE +L DP D + +LSN+YA+A WD +RK+M+E+++KK+ G SW +++N
Sbjct: 510 GRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRN 569
Query: 627 KMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+H F + + I +++ + QL + GYVP+
Sbjct: 570 DIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPN 606
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 258/493 (52%), Gaps = 34/493 (6%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H ++ N L+ +YVK ++ A+ LFD MP RNV+SW+ L++G+ G L F+
Sbjct: 47 HSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKN 106
Query: 67 MV----CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
MV C PN Y + A+SAC+ G + G + HG +++ GL + +V + L++MY
Sbjct: 107 MVSLQNAC---PNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYS 163
Query: 123 KCGLLSSAQFVFDA--SLERNSI-SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+C + A V D N I S+ S+L++ + G +++ VA +
Sbjct: 164 RCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVT 223
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
V+G CA + +L++G+++H+ + + L FD+FV LI++Y KC ++ A VF +Q
Sbjct: 224 YVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQ 283
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ W+AL+ Y Q G E+++LF M G +P+E TF+ +L A A + G
Sbjct: 284 NRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDL 343
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH+ + K+GF + V N +++ YSK ++ S F +M D+++WNA+I G+ H
Sbjct: 344 LHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGY---SH 400
Query: 360 YG---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFD 411
+G +A+++ +DM+ CPN T+ +L+ S + ++ G ++PG +
Sbjct: 401 HGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLE 460
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVG---YAQHGLGREALEI 467
+ +V + ++ G L++A K ++V+W T+L + + LGR E
Sbjct: 461 HY----TCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAE- 515
Query: 468 YSMMQENKIKPND 480
S++Q + P+D
Sbjct: 516 -SVLQ---MDPHD 524
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 100/191 (52%), Gaps = 10/191 (5%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF +VI N L+ MY K I+ + +F +M R++I+W+A+I G+S G+ + AL F
Sbjct: 352 GFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVF 411
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINMYGK 123
+ MV PNY T++G +SA + G + G + R+ +E C++ + +
Sbjct: 412 QDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSR 471
Query: 124 CGLLSSAQ-FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
GLL A+ F+ ++ + ++W +LL++ C HVH + + L R+ ++ +
Sbjct: 472 AGLLDEAENFMKTTQVKWDVVAWRTLLNA-C----HVH--RNYDLGRRIAESVLQMDPHD 524
Query: 183 VLGACAVLGNL 193
V G +L N+
Sbjct: 525 V-GTYTLLSNM 534
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 5/179 (2%)
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN---VVIGSALVDMYAKC 427
+F + P+L +L + +D+ + +GK H + SN + ++LV +Y KC
Sbjct: 4 VFSRYLPSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKC 63
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGV 486
G+L AR +FD + +N+VSWN ++ GY G E L ++ +M+ PN+ F
Sbjct: 64 GQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTA 123
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
LSAC H G V+EG + ++ G+ +++VH+++ A + + + P E
Sbjct: 124 LSACSHGGRVKEGMQ-CHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGE 181
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 203/608 (33%), Positives = 315/608 (51%), Gaps = 71/608 (11%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
+ HG + +S + + + N L++ Y + G L A+ VFD RN+ S+ +LLS+Y +
Sbjct: 36 ARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYAR 95
Query: 155 CGE----------------------------HVHG-----LKIFLLSRKSGVAISEFSCA 181
G H G L+ ++ +S A
Sbjct: 96 LGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFA 155
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S L ACA +L+ G Q+H LV + D + L+++YAKCE+ A RVF +
Sbjct: 156 SALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPER 215
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ +W++LI Y Q G EA+ LFV+M ++G P EVT S V+ A A + GRQ+H
Sbjct: 216 NVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVH 275
Query: 302 SLIIKMGFSSFTFVANTVL-DFYSKCEL-------------------------------L 329
+ ++K V N L D Y+KC +
Sbjct: 276 AHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANV 335
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
E++ F +M E +V++WN LIA + + EAI L + + P YTY N+LN
Sbjct: 336 EDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNAC 395
Query: 390 SDIPAIEWGKQTHCCIVKPGF------DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+I ++ G+Q H ++K GF +S+V +G++LVDMY K G ++D KVF+ ++++
Sbjct: 396 GNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR 455
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
+ VSWN M+VGYAQ+G ++AL ++ M + P+ T IGVLSAC H GLV+EG +F
Sbjct: 456 DNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHF 515
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+ M DHGI+P DH +V L G + A E IK P EP+ V+W LL C+ HK+
Sbjct: 516 HFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKN 575
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
+ LG A ++ DPE++ +++LSN+YAE W + +VR+ MK++ + K GCSW E
Sbjct: 576 VELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIE 635
Query: 624 LQNKMHYF 631
+ +KM+ F
Sbjct: 636 IGSKMNVF 643
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 248/512 (48%), Gaps = 46/512 (8%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV--ALNYFRL 66
N +YN LL Y + R ++A+ LF+ +P+ + S++A+++ ++ G AL +
Sbjct: 82 NTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAA 141
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M N Y++ A+SACA+ D R+G+++HG + RS + H+ L++MY KC
Sbjct: 142 MHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCER 201
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
A+ VFDA ERN +SW SL++ Y Q G L +F+ +G E + +SV+ A
Sbjct: 202 PVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSA 261
Query: 187 CAVLGNLKVGMQIHS-LVFKCALEFDKFVAMGLINLYAKCEK------------------ 227
CA L + G Q+H+ +V + L D + L+++YAKC +
Sbjct: 262 CAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVS 321
Query: 228 -------------LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
++ A VFS + ++ AW+ LI YAQ G+ EAI LFV++ +
Sbjct: 322 ETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSI 381
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF------SSFTFVANTVLDFYSKCEL 328
P+ T+ VL A ++ G+Q H ++K GF S FV N+++D Y K
Sbjct: 382 WPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGS 441
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+++ K F+ M D VSWNA+I G+ + +A+ L + ML P+ T +L+
Sbjct: 442 IDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSA 501
Query: 389 SSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF-DHLSSKNLV 446
++ G++ H G + + +VD+ + G L +A ++ D + + V
Sbjct: 502 CGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSV 561
Query: 447 SWNTMLVGYAQHG---LG-REALEIYSMMQEN 474
W ++L H LG R A ++ + EN
Sbjct: 562 LWASLLGACRLHKNVELGERTAGRLFELDPEN 593
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 129/281 (45%), Gaps = 33/281 (11%)
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G R H ++K + TF+ NT++ Y++ L E+ + FD + + S+NAL++ +
Sbjct: 35 GARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYA 94
Query: 356 ---------------------------------ASCHYGEAIELLKDMLFEGHCPNLYTY 382
H G+A+ L M + N Y++
Sbjct: 95 RLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSF 154
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
++ L+ + + G+Q H + + +V IG+ALVDMYAKC R DAR+VFD +
Sbjct: 155 ASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPE 214
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
+N+VSWN+++ Y Q+G EAL ++ M P++ T V+SAC + EG
Sbjct: 215 RNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQV 274
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
M++ + M ++V ++A G+T A S P
Sbjct: 275 HAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP 315
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V N L+ MY+K I+D K+F+ M R+ +SW+A+I G++Q G + AL+ F
Sbjct: 421 GPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLF 480
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKE-IHGRMYRSGLELNSHVSNCLINMYGK 123
M+C P+ T +G +SAC G G+ H G+ + C++++ G+
Sbjct: 481 ERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGR 540
Query: 124 CGLLSSA-QFVFDASLERNSISWVSLLSS-----YCQCGEHVHGLKIFLLSRKSG 172
G L A + + D E +S+ W SLL + + GE G L SG
Sbjct: 541 AGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSG 595
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 98/252 (38%), Gaps = 49/252 (19%)
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+L S + ++ P++ + H C++K + + LV YA+ GRL +AR+VF
Sbjct: 16 HLRASSPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVF 75
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D + +N S+N +L YA+ G EA ++ + + P+ ++ V++A G
Sbjct: 76 DGIPLRNTFSYNALLSAYARLGRPDEARALFEAIPD----PDQCSYNAVVAALARHG--- 128
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP---NKVVWRCL 554
RG A F+ + + N +
Sbjct: 129 -------------------------------RGHAGDALRFLAAMHADDFVLNAYSFASA 157
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI--MLSNVYAEANMWDETAKVRKIMKEKS 612
LS C KDL G +++ P HI L ++YA+ + +V M E++
Sbjct: 158 LSACAAEKDLRTGEQ-VHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERN 216
Query: 613 LKKDTGCSWTEL 624
+ SW L
Sbjct: 217 V-----VSWNSL 223
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 197/654 (30%), Positives = 353/654 (53%), Gaps = 5/654 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N ++ MY++ + A +FD M ++NV++W++LIS F+ G A+ FR M+ +
Sbjct: 54 NIVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVS 113
Query: 74 PNYYTYVGAVSACASR-GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P+ T+ + + R + GK +H + ++G E + V N ++ MYGKCG + A
Sbjct: 114 PDRITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGN 173
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VFD+ + N SW ++++Y Q G + L++ ++GV ++ +VLGAC +G
Sbjct: 174 VFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGA 233
Query: 193 LKVGMQIHS-LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
L+ +H+ + L+ D V LINLY KC L+ A VF I D+ +WS++I
Sbjct: 234 LEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIA 293
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
+AQ G+A AI L + M G+ P+ VTF VL A +K G+++H+ I++ G+S
Sbjct: 294 AFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSD 353
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
+ + ++ Y +E + F+ E DVVSW+++IAG+ + A+ L ++M
Sbjct: 354 DVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREME 413
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
+G PN T+ + ++ + + A+ G Q H + G D +V + +ALV++Y KCGRL
Sbjct: 414 VDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLE 473
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
+A VF + KNL++W ++ + Y Q+G G +L++ M+ +KP+ F+ +L +C
Sbjct: 474 EAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCN 533
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
+ G + +G HY+N M +D GI+P ++H +V + G+ A + I + E + + W
Sbjct: 534 YAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFE-SSLAW 592
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
LL+ CK H D AAEKI +P++ + +++LS+V+ A W+ + R+ M +
Sbjct: 593 MMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGR 652
Query: 612 SLKKDTGCSWTELQNKMHYF--STSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+++ G S E+ +++H F ++ ++ + +L + GYVPD
Sbjct: 653 GVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAGYVPD 706
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/460 (30%), Positives = 236/460 (51%), Gaps = 8/460 (1%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELN-----SHVSNCLINMYGKCGLLSSAQFVFDAS 137
++AC+ GK +HG + R L + S + N +I MY +CG A VFD
Sbjct: 17 LTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDRM 76
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV-LGACAVLGNLKVG 196
++N ++W SL+S++ G + +F SGV+ + S+ L NL G
Sbjct: 77 KDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEG 136
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
++HS + + E D+ V ++ +Y KC ++ A VF +IQ P++ +W+ +I YAQ
Sbjct: 137 KRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQN 196
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII-KMGFSSFTFV 315
G E + L +M +G+ P TF+ VLGA V + LH+ I G V
Sbjct: 197 GHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAV 256
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
+++ Y KC LEE+ F ++D D+VSW+++IA S AI+LL M EG
Sbjct: 257 GTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGV 316
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
PN T+ N+L + + A ++GK+ H IV+ G+ +V + SALV MY G + AR
Sbjct: 317 RPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARS 376
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+F+ +++VSW++M+ GY+Q+ AL ++ M+ + ++PN TF+ + AC +G
Sbjct: 377 IFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGA 436
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+ G + +R G+ + ++V+L+ G+ A
Sbjct: 437 LRRGTQ-LHERVRCLGLDKDVPVATALVNLYGKCGRLEEA 475
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 207/386 (53%), Gaps = 9/386 (2%)
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL-----INLYAKCEKLDLASR 233
+CA++L AC+ L L G ++H LV + +L D+ L I +Y +C DLA
Sbjct: 12 ACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALD 71
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
VF ++ ++ AW++LI + G +A+ LF KM SG+ P +TF+ +L ++ +
Sbjct: 72 VFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRER 131
Query: 294 TIG-GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
+ G+++HS I++ G+ V N V++ Y KC +E++ FD + + +V SW +IA
Sbjct: 132 NLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIA 191
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCC-IVKPGFD 411
+ + H E + LL M G P+ YT++ +L + + A+E K H I G D
Sbjct: 192 AYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLD 251
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+ +G+AL+++Y KCG L +A VF + +K++VSW++M+ +AQ G + A+++ +M
Sbjct: 252 RDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLM 311
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
++PN+ TF+ VL A + + G ++ I G S + +++V ++ G
Sbjct: 312 DLEGVRPNNVTFVNVLEAVTSLKAFQYG-KEIHARIVQAGYSDDVCLTSALVKMYCNWGW 370
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSG 557
A +SS E + V W +++G
Sbjct: 371 VETARSIFESSR-ERDVVSWSSMIAG 395
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 229/480 (47%), Gaps = 6/480 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ + + N ++ MY K + A +FD + + NV SW+ +I+ ++Q G
Sbjct: 143 IMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEV 202
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L M ++P+ YT+ + AC + G K +H S GL+ ++ V LIN
Sbjct: 203 LRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALIN 262
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+YGKCG L A VF ++ +SW S+++++ Q G+ +++ +L GV + +
Sbjct: 263 LYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVT 322
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+VL A L + G +IH+ + + D + L+ +Y ++ A +F + +
Sbjct: 323 FVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSR 382
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +WS++I GY+Q A+ LF +M G+ P+ VTF + A A V G Q
Sbjct: 383 ERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQ 442
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH + +G VA +++ Y KC LEE+ F M + ++++W ++ + + H
Sbjct: 443 LHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGH 502
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
+++LL M +G P+ + IL + + G + + + G V
Sbjct: 503 GSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCG 562
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG----LGREALEIYSMMQEN 474
+VD+ + G+L A ++ + + ++ ++W +L H R A +I+ + +N
Sbjct: 563 CMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTACKAHNDTARAARAAEKIFQLEPKN 622
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 162/334 (48%), Gaps = 23/334 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ +V + L+ MY + + A+ +F+ ER+V+SWS++I+G+SQ P A
Sbjct: 346 IVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARA 405
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR M ++PN T+V A+ ACA G R G ++H R+ GL+ + V+ L+N+
Sbjct: 406 LSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNL 465
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG L A+ VF ++N ++W S+ +Y Q G LK+ G+
Sbjct: 466 YGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVF 525
Query: 181 ASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
++L +C G + G+ ++L+ F A + M +++ + KL+ A ++ +
Sbjct: 526 VAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCM--VDILGRAGKLEAAEQLINT 583
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL--------GAFA 289
++ AW L+ A K+F L P T YVL G++
Sbjct: 584 MKFESSLAWMMLLTACKAHNDTARAARAAEKIFQ--LEPKNAT-PYVLLSSVFCAAGSWE 640
Query: 290 DVKET---IGGRQLHSLI----IKMGFSSFTFVA 316
+ET + GR + L+ I++G FVA
Sbjct: 641 AAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVA 674
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 217/670 (32%), Positives = 350/670 (52%), Gaps = 5/670 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G NV N L+ M+ F + +A +F M E + ISW+++I+ + + G+ + +
Sbjct: 157 VIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKES 216
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M E N T ++ C S + + G+ IH + + G N SN LI M
Sbjct: 217 LRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITM 276
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEF 178
Y G A+ VF +E++ ISW S+++ Y Q G + LK+ + + G F
Sbjct: 277 YSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTF 336
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S L AC+ G +H+LV L + V L+ LYAK + A +VF +
Sbjct: 337 T--SALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTM 394
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-G 297
D W+ALIGG+A + EA+ F M G+ + +T S VLGA + + G
Sbjct: 395 PKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHG 454
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+H+ II GF S +V N+++ Y+KC L S FD + + +WNA++A +
Sbjct: 455 MPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHH 514
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
H EA++ L +M G + +++S L ++ + +E G+Q H VK G DSN +
Sbjct: 515 GHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVA 574
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
SA +DMY KCG ++D ++ +++ +SWN + +++HG +A E + M +K
Sbjct: 575 SATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVK 634
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ TF+ +LSAC H G+VEEG Y++SMI++ GI ++ H ++ L G+ A
Sbjct: 635 PDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAET 694
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FIK P+ P VWR LL+ CKTH +L LGR A E +L DP D SA+++ SN+ A
Sbjct: 695 FIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGK 754
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
W++ K+R+ M +KK CSW +L+NK+ F + Q +++ + +L + +
Sbjct: 755 WEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKE 814
Query: 658 GGYVPDPIYS 667
GY+PD Y+
Sbjct: 815 AGYIPDISYA 824
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 173/570 (30%), Positives = 284/570 (49%), Gaps = 19/570 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V L+ +Y + DA K+F EM +NV+SW+AL+ + G P +
Sbjct: 56 IVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMV 115
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+N +R M + N T +S C S + G ++ G + + GLE N V+N LI+M
Sbjct: 116 MNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISM 175
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+G G + A +VF E ++ISW S++++Y + G L+ F + I+ +
Sbjct: 176 FGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTL 235
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+++L C + NLK G IHSLV K + + LI +Y+ + + A VF +
Sbjct: 236 STMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVE 295
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W++++ YAQ G +A+ L MF + VTF+ L A +D + G+ L
Sbjct: 296 KDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKIL 355
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+L+I +G V N ++ Y+K L+ E+ K F M + D V+WNALI GH S
Sbjct: 356 HALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEP 415
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILN---ISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA++ K M EG N T SN+L +D+ +E G H I+ GF S+ +
Sbjct: 416 DEALKAFKLMREEGVPINYITISNVLGACLAPNDL--LEHGMPIHAFIILTGFQSDEYVQ 473
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
++L+ MYAKCG LN + +FD L+SKN +WN M+ A HG EAL+ M+ +
Sbjct: 474 NSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVN 533
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM-----DHIAS-VVHLFACRGQ 531
++ +F L+A + ++EEG HG++ ++ +AS + ++ G+
Sbjct: 534 VDEFSFSECLAAAAKLAILEEGQQL-------HGLAVKLGCDSNPFVASATMDMYGKCGE 586
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
I PI +++ W L S H
Sbjct: 587 IDDVLRII-PRPINRSRLSWNILTSSFSRH 615
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 228/445 (51%), Gaps = 1/445 (0%)
Query: 48 ISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACA-SRGDARSGKEIHGRMYRSG 106
+SGF + G ++ +F M ++P+ V+AC S G ++HG + + G
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60
Query: 107 LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
L + V L+++YG GL + A VF + +N +SW +L+ +Y GE + I+
Sbjct: 61 LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
R G++ ++ + +SV+ C L N +G Q+ V K LE + VA LI+++
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
++ A VFS + D +W+++I Y + G E++ F MF + T S +L
Sbjct: 181 SVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLA 240
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
V GR +HSL++K G++S +NT++ YS E++ F M E D++S
Sbjct: 241 GCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMIS 300
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
WN+++A + + +A++LL M + N T+++ L SD GK H ++
Sbjct: 301 WNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVI 360
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
G NV++G+ALV +YAK G + +A+KVF + ++ V+WN ++ G+A EAL+
Sbjct: 361 HVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALK 420
Query: 467 IYSMMQENKIKPNDNTFIGVLSACV 491
+ +M+E + N T VL AC+
Sbjct: 421 AFKLMREEGVPINYITISNVLGACL 445
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 5/209 (2%)
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI--SSDIPAIEWGKQTHCCIVKP 408
++G + + Y E++ +M G P+ ++++ S+ IE G Q H IVK
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIE-GVQVHGFIVKV 59
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
G S+V +G++LV +Y G DA KVF + KN+VSW ++V Y +G + IY
Sbjct: 60 GLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIY 119
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
M+ + NDNT V+S CV + G+ +I+ +G+ + S++ +F
Sbjct: 120 RRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIK-YGLETNVSVANSLISMFGY 178
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G A ++ S E + + W +++
Sbjct: 179 FGSVEEAC-YVFSGMDEHDTISWNSMIAA 206
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 207/662 (31%), Positives = 358/662 (54%), Gaps = 7/662 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G NV + L+ +Y K I DA +FD E+NV+ W+A+++G + A+
Sbjct: 227 VRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAI 286
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M LE + +TYV + ACA G+++ ++ ++ + V+N ++M+
Sbjct: 287 QMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMH 346
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G + A+ +F+ ++++SW +LL E + + GV E S A
Sbjct: 347 SKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFA 406
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+V+ AC+ + + G QIH L K ++ + V LI+ Y+K ++ +V + +
Sbjct: 407 TVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDAS 466
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ + LI G Q + EAIDLF ++ GL PS TFS +L + +I G+Q+H
Sbjct: 467 SIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVH 526
Query: 302 SLIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLASCH 359
+K GF + T V +++ Y K + E++ K EM +H ++V W A+++G+ + +
Sbjct: 527 CYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGY 586
Query: 360 -YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
Y + + ++ H P+ T+++IL S++ A+ GK+ H I+K GF S S
Sbjct: 587 SYQSLLSFWRMRSYDVH-PDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATS 645
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKIK 477
A++DMY+KCG + + + F L SK ++ WN+M++G+A++G EAL ++ MQ+++IK
Sbjct: 646 AIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIK 705
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
++ TF+GVL AC H GL+ EG HYF+SM + +GI PR+DH A + L G + A E
Sbjct: 706 SDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQE 765
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
I P P+ V+W L+ C+ HKD G AA++++ +P+++S +++LSN+YA A
Sbjct: 766 VINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMYAAAGN 825
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS--VHL 655
W E R+ M+EK K GCSW + NK F + ++E+++ L+ +H
Sbjct: 826 WVEAKMAREAMREKGATKFPGCSWITVGNKTSLFLVQDKNHLGALRIYEMLDNLTRMMHK 885
Query: 656 FD 657
+D
Sbjct: 886 YD 887
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 163/557 (29%), Positives = 291/557 (52%), Gaps = 5/557 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQ-IGMPEVALN 62
G P+ +T ++ R+ DA+ L MP + ++W+A+ISG++Q G+
Sbjct: 127 GSSPDRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFG 186
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
++ M C L P T+ +SA A+ G+++H R GL+ N V + LIN+Y
Sbjct: 187 LYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYA 246
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG + A VFD S E+N + W ++L+ + V +++FL ++ G+ EF+ S
Sbjct: 247 KCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVS 306
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
VLGACA L + +G Q+ + K ++ FVA +++++K +D A +F+ I D
Sbjct: 307 VLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKD 366
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+W+AL+ G + EAI + M G+ P EV+F+ V+ A ++++ T G+Q+H
Sbjct: 367 TVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHC 426
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
L +K S V ++++DFYSK +E K ++D +V N LIAG + + E
Sbjct: 427 LAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDE 486
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF-DSNVVIGSALV 421
AI+L + +L +G P+ +T+S+IL+ + + + GKQ HC +K GF + + +G +LV
Sbjct: 487 AIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLV 546
Query: 422 DMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
Y K DA K+ + KNLV W ++ GYAQ+G ++L + M+ + P++
Sbjct: 547 GTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDE 606
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF +L AC + + +G + +I G ++++ +++ G ++E K
Sbjct: 607 VTFASILKACSEMTALSDG-KEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFK 665
Query: 541 SSPIEPNKVVWRCLLSG 557
+ + +W ++ G
Sbjct: 666 ELKSKQDITLWNSMILG 682
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 153/612 (25%), Positives = 278/612 (45%), Gaps = 73/612 (11%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ P+ + +SAC+ G SGK+ H + GL + + L+NMY +CG + A+
Sbjct: 27 VRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDAR 86
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VF +++ W S++S Y + G + +F K G + +C +V+ A LG
Sbjct: 87 RVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALG 146
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT-AWSALI 250
+L+ A + + P T AW+A+I
Sbjct: 147 -----------------------------------RLEDARTLLHRMPAPSSTVAWNAVI 171
Query: 251 GGYAQL-GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
GYAQ G E L+ M GL P+ TF+ +L A A+ I GRQ+H+ ++ G
Sbjct: 172 SGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGL 231
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
+ FV +++++ Y+KC + +++ FD E +VV WNA++ G + + + EAI++
Sbjct: 232 DANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLY 291
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M G + +TY ++L + + + G+Q C +K D+++ + +A +DM++K G
Sbjct: 292 MKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGA 351
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
++DA+ +F+ ++ K+ VSWN +LVG + EA+ + M + + P++ +F V++A
Sbjct: 352 IDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINA 411
Query: 490 CVHIGLVEEGWHYF-----NSMIRDHGI-SPRMDHIASVVHLFACRG------------- 530
C +I E G +S+ +H + S +D + + +CR
Sbjct: 412 CSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPR 471
Query: 531 --------QTRRAYEFIK------SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
Q R E I ++P+ + +LSGC ++G+ L
Sbjct: 472 NVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLK 531
Query: 577 TD--PEDTSAHIMLSNVYAEANMWDETAKVRKIMKE-KSLKKDTGCSWTELQNKMHYFST 633
+ +DTS + L Y +A M ++ K+ M + K+L + T QN Y S
Sbjct: 532 SGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSL 591
Query: 634 SRFAQFQGIDLH 645
F + + D+H
Sbjct: 592 LSFWRMRSYDVH 603
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 39/337 (11%)
Query: 162 LKIFLLSRK----SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
L F+ +R+ GV +F A+ L AC+ LG L G Q H K L F A
Sbjct: 12 LDAFVRARRCSAGGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAA 71
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
L+N+YA+C ++ A RVF I LPD W+++I GY + G+ EA+ LF +M G P
Sbjct: 72 LVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPD 131
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
VT V+ A + R +L+ +M S T
Sbjct: 132 RVTCVAVVCALTALGRLEDAR---TLLHRMPAPSST------------------------ 164
Query: 338 EMDEHDVVSWNALIAGHLASCHYG-EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
V+WNA+I+G+ E L KDM G P T++++L+ +++ A
Sbjct: 165 -------VAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFI 217
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G+Q H V+ G D+NV +GS+L+++YAKCG + DA VFD KN+V WN ML G
Sbjct: 218 EGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLV 277
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
++ EA++++ M+ ++ ++ T++ VL AC H+
Sbjct: 278 RNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHL 314
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 134/322 (41%), Gaps = 49/322 (15%)
Query: 259 ACEAIDLFVKM----FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
A +D FV+ G+ P + + L A + + + G+Q H K G S F
Sbjct: 8 ATAVLDAFVRARRCSAGGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAF 67
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
A +++ Y++C + ++ + F + D V W ++I+G+ + + EA+ L M G
Sbjct: 68 CAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMG 127
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P+ T C+ A+V GRL DAR
Sbjct: 128 SSPDRVT----------------------CV-------------AVVCALTALGRLEDAR 152
Query: 435 KVFDHL-SSKNLVSWNTMLVGYAQH-GLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
+ + + + V+WN ++ GYAQ G+ E +Y M+ + P +TF +LSA +
Sbjct: 153 TLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAAN 212
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
EG + +R HG+ + +S+++L+A G A S E N V+W
Sbjct: 213 ATAFIEGRQVHAAAVR-HGLDANVFVGSSLINLYAKCGCIGDAILVFDCSG-EKNVVMWN 270
Query: 553 CLLSGCKTHKDLVLGRYAAEKI 574
+L+G LV Y E I
Sbjct: 271 AMLNG------LVRNEYQVEAI 286
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 200/669 (29%), Positives = 358/669 (53%), Gaps = 2/669 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G H ++ + L + + ++LF+++ + ++ ++ LI GFS G+P+ +
Sbjct: 37 LILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSS 96
Query: 61 LN-YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ Y L L P+ +TY A+SA + D R G +H G+ N V + +++
Sbjct: 97 IFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVD 156
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y K A+ VFD ER+++ W +++S + + +++F+ G++ +
Sbjct: 157 LYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTT 216
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
A+VL A A L ++GM I L K L D +V GLI+LY+KC K +F I
Sbjct: 217 LATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQID 276
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PDL +++A+I GY + A+ LF ++ +SG + T ++ + R
Sbjct: 277 QPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRL 336
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+ +L +K+G V+ + Y + ++ + + FDE E + SWNA+I+G+ +
Sbjct: 337 IQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGL 396
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
AI L ++M+ + PN T ++IL+ + + A+ GK H I +SNV + +A
Sbjct: 397 TDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTA 455
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMYAKCG + +AR++FD + KN+V+WN M+ GY HG G+EAL+++ M ++ I P
Sbjct: 456 LVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPT 515
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ +L AC H GLV EG F+SM ++G P +H A +V + GQ A EFI
Sbjct: 516 GVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFI 575
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ P+EP VW LL C HK+ + A++++ DPE+ +++LSN+Y+ +
Sbjct: 576 ERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFP 635
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ A VR+++K++ L K GC+ E+ ++ + F++ + Q + E++ +L+ + + G
Sbjct: 636 KAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAG 695
Query: 660 YVPDPIYSS 668
Y + + ++
Sbjct: 696 YQAETVTTA 704
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 206/660 (31%), Positives = 343/660 (51%), Gaps = 17/660 (2%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+L + R++DA P+ + +I GF+ G+PE AL +R M+ P+
Sbjct: 49 LVLSHAAAGRMHDALAAVRSSPD--AFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPD 106
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLINMYGKCGLLSSAQFVF 134
+T+ V CA G G+ H R GL + + N L+ Y K G+++ A+ VF
Sbjct: 107 RFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVF 166
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIF------LLSRKSGVAISEFSCASVLGACA 188
D R+ ++W S++ Y G L F L + GV I + L AC
Sbjct: 167 DGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGI-----IAALAACC 221
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ L G ++H+ V + LE D V L+++Y KC + A +F+ + + W+
Sbjct: 222 LDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNC 281
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+IGGYA G EA D FV+M + G VT +L A A + ++ GR +H + +
Sbjct: 282 MIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQ 341
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F + +L+ YSK ++ S F +M +VSWN +IA ++ Y EAI L
Sbjct: 342 FLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFL 401
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
++L + P+ +T S ++ + + +Q H IV+ + N ++ +A++ MYA+CG
Sbjct: 402 ELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCG 461
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ +RK+FD ++ K+++SWNT+++GYA HG G+ ALE++S M+ N ++PN++TF+ VL+
Sbjct: 462 DVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLT 521
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC G+ +EGW FN M RD+GI P+++H + L G R +FI+S PI P
Sbjct: 522 ACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTF 581
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
+W LL+ + D+ + YAAE+I + ++T +++LS++YA+A W++ ++R M
Sbjct: 582 RIWGSLLTASRNRNDIDIAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSM 641
Query: 609 KEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY---VPDPI 665
EK L++ S EL F Q +HEV + LS + + Y + DPI
Sbjct: 642 MEKGLRRTDARSIVELHGSSCSFVNGDMTHPQSKTIHEVSDVLSRKIGETDYPRNLSDPI 701
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 189/382 (49%), Gaps = 1/382 (0%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM-V 68
V T N LL Y K + DA+++FD MP R++++W++++ G+ G+ +AL+ FR M
Sbjct: 143 VYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHE 202
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
++ + + A++AC G+E+H + R GLE + V L++MY KCG ++
Sbjct: 203 GLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIA 262
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
SA+ +F R ++W ++ Y G F+ + G + + ++L ACA
Sbjct: 263 SAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACA 322
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ G +H V + + L+ +Y+K K+ + +F + L +W+
Sbjct: 323 QTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNN 382
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I Y EAI LF+++ + L P T S V+ AF + RQ+HS I+++
Sbjct: 383 MIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLD 442
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
+ T V N V+ Y++C + S K FD+M DV+SWN +I G+ A+E+
Sbjct: 443 YGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFS 502
Query: 369 DMLFEGHCPNLYTYSNILNISS 390
+M G PN T+ ++L S
Sbjct: 503 EMKSNGLQPNESTFVSVLTACS 524
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 147/287 (51%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G +V LL MY K I A+ +F MP R V++W+ +I G++ G PE A
Sbjct: 236 VIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEA 295
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M + T + ++ACA + G+ +HG + RS + + L+ M
Sbjct: 296 FDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEM 355
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + S++ +F + +SW +++++Y + + +FL + F+
Sbjct: 356 YSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTM 415
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++V+ A +LG L+ Q+HS + + + V ++++YA+C + + ++F +
Sbjct: 416 SAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAG 475
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
D+ +W+ +I GYA G+ A+++F +M S+GL P+E TF VL A
Sbjct: 476 KDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTA 522
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 101/188 (53%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S F P+V+ LL MY K ++ ++ +F +M + ++SW+ +I+ + M A+
Sbjct: 340 SQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITL 399
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F ++ L P+Y+T V A G R +++H + R N+ V+N +++MY +
Sbjct: 400 FLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYAR 459
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + S++ +FD ++ ISW +++ Y G+ L++F + +G+ +E + SV
Sbjct: 460 CGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSV 519
Query: 184 LGACAVLG 191
L AC+V G
Sbjct: 520 LTACSVSG 527
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N + N ++ MY + + ++K+FD+M ++VISW+ +I G++ G ++AL F M
Sbjct: 446 NTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMK 505
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINMYGKCGLL 127
L+PN T+V ++AC+ G A G M R G+ C+ ++ G+ G L
Sbjct: 506 SNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDL 565
Query: 128 SSA-QFVFDASLERNSISWVSLLSS 151
+F+ + W SLL++
Sbjct: 566 REVLKFIESIPITPTFRIWGSLLTA 590
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 314/533 (58%), Gaps = 3/533 (0%)
Query: 104 RSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLK 163
+SG + + +N +I+ Y KCG + A +F + +R+++SW ++++ + G L+
Sbjct: 27 KSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALE 86
Query: 164 IFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYA 223
++ G A+ +S S+L A +G ++VG Q+HS++ K E + F L+++YA
Sbjct: 87 FLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYA 146
Query: 224 KCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSY 283
KCE+++ A VF +I + + W+ALI GYAQ+G A L M G+ + TF+
Sbjct: 147 KCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAP 206
Query: 284 VLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD---EMD 340
+L D Q+H+ I+K G +S T V N ++ YS+C +E++ + FD E
Sbjct: 207 LLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETR 266
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
+ D VSWN+++ G S +A++ ++M + + Y +S +L SD+ ++ G+Q
Sbjct: 267 DLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQ 326
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
H ++K GF+ N + S+L+ MY+KCG + DARK FD + ++WN+++ GYAQHG
Sbjct: 327 VHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGR 386
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
G+ AL+++ +M++ ++K + TF+ VL+AC HIGLVEEGW + SM D+GI PRM+H A
Sbjct: 387 GKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYA 446
Query: 521 SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE 580
++ L G+ A I++ P EP+ +VW+ LL C+T D+ L A +L +PE
Sbjct: 447 CMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPE 506
Query: 581 DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
+ +++LS+++ W+E A ++++MKE+ +KK G SW E++N++ F+
Sbjct: 507 EHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNA 559
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 227/456 (49%), Gaps = 5/456 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I SG ++ T N+++ Y K I A K+F E +R+ +SW+ +I+GF +G E AL
Sbjct: 26 IKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETAL 85
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ + M + Y++ + A G G+++H M + G E N + L++MY
Sbjct: 86 EFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMY 145
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + A VF + RNS++W +L+S Y Q G+ + GV I + + A
Sbjct: 146 AKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFA 205
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN-IQL 240
+L K+ Q+H+ + K L D V +I Y++C ++ A RVF I+
Sbjct: 206 PLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIET 265
Query: 241 PDL--TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
DL +W++++ G++Q G + +A+ F M S ++ FS VL + +D+ G+
Sbjct: 266 RDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQ 325
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H L++K GF FVA++++ YSKC ++E++ K+FD + ++WN+LI G+
Sbjct: 326 QVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHG 385
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIG 417
A++L M + T+ +L S I +E G + G +
Sbjct: 386 RGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHY 445
Query: 418 SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
+ ++D+ + GRL++A+ + + + + + W T+L
Sbjct: 446 ACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLL 481
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 186/388 (47%), Gaps = 16/388 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ G+ NV + LL MY K R+ DA ++F + RN ++W+ALISG++Q+G A
Sbjct: 126 MVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTA 185
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
M +E + T+ ++ + ++H ++ + GL ++ V N +I
Sbjct: 186 FWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITA 245
Query: 121 YGKCGLLSSAQFVFDASLER---NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
Y +CG + A+ VFD ++E + +SW S+L+ + Q G LK F R V I
Sbjct: 246 YSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDH 305
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
++ ++VL +C+ L L++G Q+H LV K E + FVA LI +Y+KC ++ A + F
Sbjct: 306 YAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDA 365
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
AW++LI GYAQ G+ A+DLF M + +TF VL A + + G
Sbjct: 366 TPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEG 425
Query: 298 RQ-LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHL 355
L S+ G ++D + L+E+ + M E D + W L L
Sbjct: 426 WSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTL----L 481
Query: 356 ASCHYGEAIEL-------LKDMLFEGHC 376
+C IEL L ++ E HC
Sbjct: 482 GACRTCGDIELASQVASHLLELEPEEHC 509
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 148/296 (50%), Gaps = 20/296 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFD---EMPERNVISWSALISGFSQIGMP 57
++ G + N ++ Y + I DA+++FD E + + +SW+++++GFSQ G+
Sbjct: 227 IVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLS 286
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
E AL +F M + ++Y + + +C+ + G+++H + +SG E N V++ L
Sbjct: 287 EDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSL 346
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
I MY KCG++ A+ FDA+ + +SI+W SL+ Y Q G L +F L + V +
Sbjct: 347 IFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDH 406
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA------MGLINLYAKCEKLDLA 231
+ +VL AC+ +G ++ G F ++E D + +I+L + +LD A
Sbjct: 407 ITFVAVLTACSHIGLVEEGWS-----FLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEA 461
Query: 232 SRVFSNIQL-PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVL 285
+ + PD W L+G + C I+L ++ S L + E +YVL
Sbjct: 462 KALIEAMPFEPDAMVWKTLLGAC----RTCGDIELASQVASHLLELEPEEHCTYVL 513
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
S A+ HC +K G +++ + ++ YAKCG + A K+F S ++ VSWN
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWN 69
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
TM+ G+ G ALE M+ + +F +L +G VE G +SM+
Sbjct: 70 TMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVG-QQVHSMMVK 128
Query: 510 HGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G + ++++ ++A + A+E KS I N V W L+SG
Sbjct: 129 MGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIR-NSVTWNALISG 175
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/552 (35%), Positives = 309/552 (55%), Gaps = 5/552 (0%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y+ + C D + G IH + R+G + N H+S LI Y K G +A+ VFD
Sbjct: 40 YMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMP 99
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
ERN +SW + +S Y + G + L +F ++GV ++F+ SVL AC L L+ GMQ
Sbjct: 100 ERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQ 159
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
IH + K + FV L++L++KC ++ A +F + D+ +W+A+IGGYA
Sbjct: 160 IHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDF 219
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
++ +F M G+ P T VL A + I Q+H +II++GF S + +
Sbjct: 220 NDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGS 279
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EAIELLKDMLFEGHCP 377
++D Y+K E ++ + + M + DV+S+ A++ G+ C Y EA++L KDM
Sbjct: 280 LIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEI 339
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSNVVIGSALVDMYAKCGRLNDARK 435
+ T+ +LN+ +DI ++ G+Q H +K P +D V G+ALVDMYAK G + DA +
Sbjct: 340 DDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYD--VATGNALVDMYAKSGEIEDATR 397
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
F + KN++SW +++ GY +HG G EA+ +Y M+ +KPND TF+ +L AC H GL
Sbjct: 398 AFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGL 457
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
EGW FN+MI + I PR +H + ++ LFA GQ AY I I+PN +W +L
Sbjct: 458 TGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAIL 517
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
C + + LG AA +L DPE+++ +++L+ +YA + WD+ ++R +M+ +SLKK
Sbjct: 518 GACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLMEYRSLKK 577
Query: 616 DTGCSWTELQNK 627
G S + NK
Sbjct: 578 IPGYSIIQSTNK 589
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 241/492 (48%), Gaps = 36/492 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +GF N+ L++ YVKF +A+K+FD MPERNV+SW+A ISG+++ G + A
Sbjct: 63 IIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNVVSWTAQISGYAKNGHYQDA 122
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + N +TY + AC G +IHG + ++ N V + L+++
Sbjct: 123 LLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQKNRFIGNLFVQSALVDL 182
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ KCG + A+++F+ ER+ +SW +++ Y + ++F GV F+
Sbjct: 183 HSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEGVTPDCFTL 242
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A + NL QIH ++ + + LI+ YAK E + AS ++ ++
Sbjct: 243 GSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLK 302
Query: 241 PDLTAWSALIGGYA-QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +++A++ GYA + + EA+DLF M + +VTF +L AD+ GRQ
Sbjct: 303 KDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQ 362
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+L IK S N ++D Y+K +E++ + F EM E +V+SW +LI G+ +
Sbjct: 363 IHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGY 422
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGS 418
EAI L K M +EG PN T+ ++L S G + + I K S
Sbjct: 423 GHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAEHYS 482
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
++D++A+ G+L +A Y+M+ + IKP
Sbjct: 483 CMIDLFARGGQLEEA----------------------------------YNMICKMNIKP 508
Query: 479 NDNTFIGVLSAC 490
N + + +L AC
Sbjct: 509 NSSLWGAILGAC 520
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 204/633 (32%), Positives = 346/633 (54%), Gaps = 3/633 (0%)
Query: 32 LFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGD 91
L D+ P+ V W+ +S G A+ F M ++ + T + ++A A D
Sbjct: 862 LSDDNPD--VFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDD 919
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
GK++HG +SGL+ + V+N L+NMY K G A+ VF+ + ISW S++SS
Sbjct: 920 LELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISS 979
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA-VLGNLKVGMQIHSLVFKCALEF 210
Q + +F+ G+ F+ ASVL AC+ ++ L + QIH K
Sbjct: 980 CAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIA 1039
Query: 211 DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF 270
D FVA LI++Y+K K++ A +F N DL W+A++ GY +A++LF +
Sbjct: 1040 DSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIH 1099
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
SG ++T + A + G+Q+H+ IK GF S V + +LD Y KC +
Sbjct: 1100 KSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMV 1159
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
+ F+ + D V+W ++I+G + + + +A+ + M P+ YT++ ++ SS
Sbjct: 1160 NAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASS 1219
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
+ A+E G+Q H ++K S+ +G++LVDMYAKCG + DA ++F ++ +N+ WN
Sbjct: 1220 CVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNA 1279
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
MLVG AQHG EA+ ++ M+ + I+P+ +FIG+LSAC H GL E + Y +SM D+
Sbjct: 1280 MLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDY 1339
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYA 570
GI P ++H + +V G + A + I++ P + + + R LL C+ D+ G+
Sbjct: 1340 GIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRV 1399
Query: 571 AEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHY 630
A ++ + +P D++A+++LSN+YA AN WD+ RK+MK K++KKD G SW +++N +H
Sbjct: 1400 AARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHL 1459
Query: 631 FSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
F + Q +++ + ++ + + GYVPD
Sbjct: 1460 FVVDDRSHPQADIIYDKVEEMMKTIREDGYVPD 1492
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/575 (26%), Positives = 269/575 (46%), Gaps = 55/575 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGF-----SQIG 55
++ SG + N+LL MY K ++ A+++FD PER++++W+A++ + S G
Sbjct: 647 IVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDG 706
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
+ L+ FRL+ + T + C + G + + +HG + GLE + VS
Sbjct: 707 NAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSG 766
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
L+N+Y KCG + A+ +FD ER+ + W +L Y Q G ++F +SG+
Sbjct: 767 ALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRP 826
Query: 176 SEFSCASVLGACAVLGNLKVGM----QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
EFS +L + + N G Q+ + K +L D
Sbjct: 827 DEFSVQLILNGVSEV-NWDEGKWLADQVQAYAAKLSLSDDN------------------- 866
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
PD+ W+ + G AI+ FV M + VT VL A A
Sbjct: 867 ---------PDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGT 917
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
+ G+Q+H + +K G S VAN++++ YSK + + F++M D++SWN++I
Sbjct: 918 DDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMI 977
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI-SSDIPAIEWGKQTHCCIVKPGF 410
+ S E++ L D+L EG P+ +T +++L SS I + +Q H +K G
Sbjct: 978 SSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGN 1037
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
++ + + L+D+Y+K G++ +A +F + +L WN M+ GY G++ALE++S+
Sbjct: 1038 IADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSL 1097
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD---HIAS-VVHLF 526
+ ++ K + T AC + L+++G I H I D H+ S ++ ++
Sbjct: 1098 IHKSGEKSDQITLATAAKACGCLVLLDQG-----KQIHAHAIKAGFDSDLHVNSGILDMY 1152
Query: 527 ACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGC 558
G A + +I + P+ V W ++SGC
Sbjct: 1153 IKCGDMVNAGIVFNYISA----PDDVAWTSMISGC 1183
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 233/455 (51%), Gaps = 2/455 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG +V N L+ MY K A+++F++M ++ISW+++IS +Q + E ++
Sbjct: 931 VKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESV 990
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARS-GKEIHGRMYRSGLELNSHVSNCLINM 120
N F ++ L+P+++T + AC+S D + ++IH ++G +S V+ LI++
Sbjct: 991 NLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDV 1050
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+F+F + + W +++ Y + L++F L KSG + +
Sbjct: 1051 YSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITL 1110
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+ AC L L G QIH+ K + D V G++++Y KC + A VF+ I
Sbjct: 1111 ATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISA 1170
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
PD AW+++I G G +A+ ++ +M S +MP E TF+ ++ A + V GRQL
Sbjct: 1171 PDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQL 1230
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK+ S FV +++D Y+KC +E++ + F +M+ ++ WNA++ G +
Sbjct: 1231 HANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNA 1290
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI-EWGKQTHCCIVKPGFDSNVVIGSA 419
EA+ L K M G P+ ++ IL+ S E + H G + + S
Sbjct: 1291 EEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSC 1350
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
LVD + G + +A KV + + K S N L+G
Sbjct: 1351 LVDALGRAGLVQEADKVIETMPFKASASINRALLG 1385
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 195/401 (48%), Gaps = 30/401 (7%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
GK H R+ SG + +SN L+ MY KCG LSSA+ VFD + ER+ ++W ++L +Y
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 155 C-----GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
G GL +F L R S + + + A VL C G L +H K LE
Sbjct: 700 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 759
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
+D FV+ L+N+Y+KC ++ A +F ++ D+ W+ ++ GY QLG EA LF +
Sbjct: 760 WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF 819
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
SGL P E + +L ++V G ++A+ V + +K L
Sbjct: 820 HRSGLRPDEFSVQLILNGVSEVNWDEG----------------KWLADQVQAYAAKLSLS 863
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
+ D DV WN ++ L + AIE +M + T +L
Sbjct: 864 D---------DNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAV 914
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
+ +E GKQ H VK G DS+V + ++LV+MY+K G AR+VF+ + +L+SWN
Sbjct: 915 AGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWN 974
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+M+ AQ L E++ ++ + +KP+ T VL AC
Sbjct: 975 SMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRAC 1015
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 110/209 (52%), Gaps = 5/209 (2%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+ H+ I+ G + F++N +L YSKC L + + FD E D+V+WNA++ + A
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 357 SC-----HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
S + E + L + + T + +L + + + + H +K G +
Sbjct: 700 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 759
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+V + ALV++Y+KCGR+ DAR +FD + +++V WN ML GY Q GL +EA +++S
Sbjct: 760 WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF 819
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+ ++P++ + +L+ + E W
Sbjct: 820 HRSGLRPDEFSVQLILNGVSEVNWDEGKW 848
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
NL +G H+ + D F++ L+ +Y+KC L A +VF DL W+A++G
Sbjct: 636 NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILG 695
Query: 252 GYA-----QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
YA G A E + LF + +S + +T + VL + +H IK
Sbjct: 696 AYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIK 755
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
+G FV+ +++ YSKC + ++ FD M E DVV WN ++ G++ EA +L
Sbjct: 756 IGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQL 815
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDI 392
+ G P+ ++ ILN S++
Sbjct: 816 FSEFHRSGLRPDEFSVQLILNGVSEV 841
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/579 (33%), Positives = 308/579 (53%)
Query: 51 FSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELN 110
S+ G + A ++ + M + ++Y AC G+ IH R+ R+ +
Sbjct: 62 LSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPS 121
Query: 111 SHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK 170
+ NCL+ MY CG Q VFD L +N +SWV ++S+Y + GE +++F +
Sbjct: 122 GSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQA 181
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDL 230
SG+ + S+L +C L++G Q+HS V + L + V + N+Y +C L+
Sbjct: 182 SGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEG 241
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
A VF + + W+ L+ GY Q K A++LF +M G+ E FS VL
Sbjct: 242 AKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCX 301
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+++ G+Q+HS I+K+G S V ++DFY KC +E + ++F + E + VSW+AL
Sbjct: 302 LEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSAL 361
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
I+G S + I++ + EG N + Y+++ + + G Q H +K G
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGL 421
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
S + SA+V MY+KCGRL+ AR+ F+ + + V+W ++ GYA HG EAL +
Sbjct: 422 VSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRR 481
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
MQ ++PN TFI VL+AC H GLV E Y SM RD+G+ P +DH ++ ++ G
Sbjct: 482 MQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAG 541
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN 590
A E I P EP+ + W+ LL GC H DL LG+ AAE + DP DT+ +I+L N
Sbjct: 542 LLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFN 601
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMH 629
+Y+ W+E VRK+M E+ LKK+ CSW ++ ++H
Sbjct: 602 LYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVH 640
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 242/504 (48%), Gaps = 17/504 (3%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+P+ N LL MY D QK+FDEM +N++SW +IS +++ G E A+ F
Sbjct: 119 NPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSD 178
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + PN Y+ + +C GK++H + R+ L N V + NMY +CG
Sbjct: 179 MQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGW 238
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A+ VFD +N+++W L+ Y Q + L++F GV + EF + VL
Sbjct: 239 LEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKV 298
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
C L + +G QIHS + K E + V L++ Y KC ++ A R F I P+ +W
Sbjct: 299 CCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSW 358
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
SALI G++Q G+ + I +F + S G++ + ++ V A A G Q H IK
Sbjct: 359 SALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIK 418
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G S+ + + ++ YSKC L+ + + F+ +DE D V+W A+I+G+ + EA+
Sbjct: 419 RGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGF 478
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGSALV 421
+ M G PN T+ +L S + KQ + VKP D ++
Sbjct: 479 FRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHY----DCMI 534
Query: 422 DMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN--KIKP 478
D Y++ G L +A ++ + + + +SW ++L G H L++ + EN ++ P
Sbjct: 535 DTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWAHC----DLKLGKIAAENLFRLDP 590
Query: 479 NDNT-FIGVLSACVHIGLVEEGWH 501
D +I + + G EE H
Sbjct: 591 GDTAGYILLFNLYSAFGKWEEAGH 614
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 181/365 (49%), Gaps = 12/365 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + + N+ + MYV+ + A+ +FD M +N ++W+ L+ G++Q EVA
Sbjct: 214 VIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVA 273
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M +E + + + + C D GK+IH + + G E V L++
Sbjct: 274 LELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDF 333
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + SA F E N +SW +L+S + Q G +KIF R GV ++ F
Sbjct: 334 YVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIY 393
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SV ACA NL +G Q H K L + ++ +Y+KC +LD A R F +I
Sbjct: 394 TSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE 453
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL------GAFADVKET 294
PD AW+A+I GYA G A EA+ F +M S G+ P+ VTF VL G A+ K+
Sbjct: 454 PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQY 513
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
+G S+ G + ++D YS+ LL E+L+ + M E D +SW +L+ G
Sbjct: 514 LG-----SMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGG 568
Query: 354 HLASC 358
A C
Sbjct: 569 CWAHC 573
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 205/667 (30%), Positives = 348/667 (52%), Gaps = 5/667 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G V+ N L+ MY + + +A+++FD + N +W+A+I+G+ + G+ E A
Sbjct: 331 AGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRL 389
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
FR M +P+ +TY ++ CA R D GKE+H ++ +G + + V+ LI+MY K
Sbjct: 390 FRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAK 449
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG A+ VF+ ERN ISW + +S C+ + F R+ V + ++
Sbjct: 450 CGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITL 509
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L +C +L+ G IH + + + + VA LI++Y +C L A VF I+ DL
Sbjct: 510 LNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDL 569
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+A+I Q G A DLF K S G + TF VL A A++++ GR +H L
Sbjct: 570 GSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGL 629
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+ K GF V T++ YSKC L ++ F + E DVV WNA++A + S +A
Sbjct: 630 VEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDA 689
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
++L + M EG P+ TYS LN + + A+E GK+ H + + G +++ + ++L++M
Sbjct: 690 LKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEM 749
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y++CG L A++VF+ + S+++ SWN ++ GY Q+G G ALE Y +M I PN TF
Sbjct: 750 YSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATF 809
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+LS+ +G E+ + + S+ ++ + P H A +V G + A EFI+
Sbjct: 810 TSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEIS 869
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI-MLSNVYAEANMWDETA 602
E ++W LL C+ H ++ L A E +L + + A L ++YA A W++ +
Sbjct: 870 AESAALMWESLLVACRIHLNVELAETAVEHLLDAKAQASPAVCEQLMSIYAAAGRWEDVS 929
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
++ M+E L C+ E+ ++ H F + + G+ + +L + D G+
Sbjct: 930 VLKTTMQEAGLVALKSCT-IEVNSEFHNFIANHLSPQIGVQCK--IEELVRKMTDRGFSL 986
Query: 663 DPIYSSH 669
DP Y+S+
Sbjct: 987 DPQYASN 993
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 197/626 (31%), Positives = 329/626 (52%), Gaps = 14/626 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M ++ F P++ N L+ MY K I DA +F M +++V+SW+A+ISG++ G + A
Sbjct: 126 MRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEA 185
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M L+PN T++ +SAC S G++IH R+ ++G E + +VS LINM
Sbjct: 186 ADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINM 245
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L A+ VF+ ERN +SW +++S Y Q G+ L +F +SG+ ++ S
Sbjct: 246 YCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSF 305
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+LGAC +L G+++H+ + + LE + V LI++Y++C L A +VF N++
Sbjct: 306 ASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRS 365
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ T W+A+I GY + G EA LF M G P + T++ +L AD + G++L
Sbjct: 366 LNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKEL 424
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS I G+ + VA ++ Y+KC EE+ K F++M E +V+SWNA I+ C +
Sbjct: 425 HSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFIS---CCCRH 481
Query: 361 G---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA + K M + P+ T+ +LN + +E G+ H I + G SN +
Sbjct: 482 DLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVA 541
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL+ MY +CG L DAR+VF + ++L SWN M+ QHG A +++ + K
Sbjct: 542 NALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGK 601
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
+ TFI VL A ++ ++ G + ++ G + + +++ +++ G R A E
Sbjct: 602 GDKYTFINVLRAVANLEDLDAG-RMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDA-E 659
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDL---VLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
+ S+ E + V W +L+ H D L + ++ +P D+S + N A
Sbjct: 660 NVFSTVQEKDVVCWNAMLAA-YAHSDRGQDALKLFQQMQLEGVNP-DSSTYSTALNACAR 717
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCS 620
+ K+ +KE ++ DT S
Sbjct: 718 LTAVEHGKKIHAQLKEAGMETDTRVS 743
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 153/504 (30%), Positives = 269/504 (53%), Gaps = 24/504 (4%)
Query: 25 RINDAQKLFDEMPE--RNVISWSALISGFSQIGMPEVALN---YFRLMVCCVLEPNYYTY 79
RI ++ +DE P+ R+ ++ +G V N Y R + CVL +
Sbjct: 60 RIRESNNTWDEGPKIVRDTREGKSIKGAVQLLGKRGVQANLNFYARRLQQCVLAKSLA-- 117
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
GK++H M + + + +++N LI+MY KCG + A VF A +
Sbjct: 118 --------------EGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMED 163
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQI 199
++ +SW +++S Y G +F ++ G+ ++ + S+L AC L+ G QI
Sbjct: 164 KDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQI 223
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
HS + K E D V+ LIN+Y KC L+LA +VF+ ++ ++ +W+A+I GY Q G +
Sbjct: 224 HSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDS 283
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
EA+ LF K+ SG+ P++V+F+ +LGA + + G +LH+ I + G V N +
Sbjct: 284 REALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNAL 343
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
+ YS+C L + + FD + + +WNA+IAG+ EA L + M +G P+
Sbjct: 344 ISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGY-GEGLMEEAFRLFRAMEQKGFQPDK 402
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
+TY+++L I +D ++ GK+ H I G+ +++ + +AL+ MYAKCG +ARKVF+
Sbjct: 403 FTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQ 462
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ +N++SWN + +H LG+EA + + M+ + + P+ TFI +L++C +E G
Sbjct: 463 MPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERG 522
Query: 500 WHYFNSMIRDHGISPRMDHIASVV 523
Y + I G+ +H+A+ +
Sbjct: 523 -RYIHGKINQWGMLSN-NHVANAL 544
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 245/460 (53%), Gaps = 2/460 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ ++G+ ++ L+ MY K +A+K+F++MPERNVISW+A IS + + + A
Sbjct: 428 IASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEA 487
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F+ M + P++ T++ +++C S D G+ IHG++ + G+ N+HV+N LI+M
Sbjct: 488 FQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISM 547
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YG+CG L+ A+ VF R+ SW +++++ Q G + +F R G +++
Sbjct: 548 YGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTF 607
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL A A L +L G IH LV K D V LI +Y+KC L A VFS +Q
Sbjct: 608 INVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQE 667
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+A++ YA + +A+ LF +M G+ P T+S L A A + G+++
Sbjct: 668 KDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKI 727
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ + + G + T V+N++++ YS+C L + + F++M D+ SWNALIAG+ +
Sbjct: 728 HAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQG 787
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
A+E + ML PN T+++IL+ + + E I K + + +
Sbjct: 788 NIALEYYELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAY 847
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKN-LVSWNTMLVGYAQH 458
+V + G L +A + + +S+++ + W ++LV H
Sbjct: 848 MVAALGRAGLLKEAEEFIEEISAESAALMWESLLVACRIH 887
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 215/409 (52%), Gaps = 4/409 (0%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
K GV + A L C + +L G ++H + + D ++ LI++Y+KC ++
Sbjct: 93 KRGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIE 152
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A+ VF ++ D+ +W+A+I GYA G+ EA DLF +M GL P++ TF +L A
Sbjct: 153 DANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQ 212
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
G Q+HS I K G+ S V+ +++ Y KC LE + K F+EM E +VVSW A
Sbjct: 213 SPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTA 272
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I+G++ EA+ L + ++ G PN ++++IL ++ + G + H I + G
Sbjct: 273 MISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAG 332
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ V++G+AL+ MY++CG L +AR+VFD+L S N +WN M+ GY + GL EA ++
Sbjct: 333 LEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFR 391
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M++ +P+ T+ +L+ C ++ G +S I G + +++ ++A
Sbjct: 392 AMEQKGFQPDKFTYASLLAICADRADLDRG-KELHSQIASTGWQTDLTVATALISMYAKC 450
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD 578
G A + P E N + W +S C H DL + A K + D
Sbjct: 451 GSPEEARKVFNQMP-ERNVISWNAFISCCCRH-DLGKEAFQAFKQMRRD 497
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/605 (32%), Positives = 329/605 (54%), Gaps = 1/605 (0%)
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL F M P T+ + CA+RGD +G+ +H ++ G++ + + L N
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEF 178
MY KC + A+ VFD R+ ++W +L++ Y + G +++ + + + G
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ SVL ACA L + H+ + LE VA +++ Y KC + A VF +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ +W+A+I GYAQ G + EA+ LF +M G+ ++V+ L A ++ G
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H L++++G S V N ++ YSKC+ ++ + FDE+D VSWNA+I G +
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+A+ L M E P+ +T +++ +DI + H ++ D +V + +
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAKCGR+N AR +F+ +++++WN M+ GY HG G+ A+E++ M+ I P
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVP 462
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N+ TF+ VLSAC H GLV+EG YF SM D+G+ P M+H ++V L G+ A+ F
Sbjct: 463 NETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAF 522
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I+ P++P V+ +L CK HK++ L +A+KI P++ H++L+N+YA A+MW
Sbjct: 523 IQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMW 582
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
+ A+VR M++ L+K G S +L+N++H F + Q +++ + +L +
Sbjct: 583 KDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAV 642
Query: 659 GYVPD 663
GYVPD
Sbjct: 643 GYVPD 647
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 230/435 (52%), Gaps = 2/435 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ G + L MY K R DA+++FD MP R+ ++W+AL++G+++ G+ +A
Sbjct: 85 LAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMA 144
Query: 61 LN-YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ R+ P+ T V + ACA+ + +E H RSGLE +V+ +++
Sbjct: 145 MEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILD 204
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG + +A+ VFD +NS+SW +++ Y Q G+ L +F + GV +++ S
Sbjct: 205 AYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVS 264
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ L AC LG L GM++H L+ + L+ + V LI +Y+KC+++DLAS VF +
Sbjct: 265 VLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELD 324
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+W+A+I G AQ G + +A+ LF +M + P T V+ A AD+ + + R
Sbjct: 325 RRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARW 384
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H I++ +V ++D Y+KC + + F+ E V++WNA+I G+ +
Sbjct: 385 IHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGF 444
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
A+EL ++M G PN T+ ++L+ S ++ G++ + + G + +
Sbjct: 445 GKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYG 504
Query: 419 ALVDMYAKCGRLNDA 433
+VD+ + G+L++A
Sbjct: 505 TMVDLLGRAGKLDEA 519
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 174/369 (47%), Gaps = 4/369 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I SG V +L Y K I A+ +FD MP +N +SW+A+I G++Q G AL
Sbjct: 188 IRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREAL 247
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F MV ++ + + A+ AC G G +H + R GL+ N V N LI MY
Sbjct: 248 ALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMY 307
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + A VFD R +SW +++ Q G +++F + V F+
Sbjct: 308 SKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLV 367
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SV+ A A + + IH + L+ D +V LI++YAKC ++++A +F++ +
Sbjct: 368 SVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER 427
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-L 300
+ W+A+I GY G A++LF +M S G++P+E TF VL A + GR+
Sbjct: 428 HVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYF 487
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
S+ G T++D + L+E+ +M +S + L +C
Sbjct: 488 TSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLS---VYGAMLGACKL 544
Query: 361 GEAIELLKD 369
+ +EL ++
Sbjct: 545 HKNVELAEE 553
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 144/289 (49%), Gaps = 6/289 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G NV N L+ MY K R++ A +FDE+ R +SW+A+I G +Q G E A
Sbjct: 288 LVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDA 347
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M ++P+ +T V + A A D + IHG R L+ + +V LI+M
Sbjct: 348 VRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 407
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG ++ A+ +F+++ ER+ I+W +++ Y G +++F + G+ +E +
Sbjct: 408 YAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL AC+ G + G + S+ LE +++L + KLD A +
Sbjct: 468 LSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP 527
Query: 240 L-PDLTAWSALIGGYAQLGKACE-AIDLFVKMFSSGLMPSEVTFSYVLG 286
+ P L+ + A++G +L K E A + K+F G P E + +L
Sbjct: 528 MDPGLSVYGAMLGA-CKLHKNVELAEESAQKIFELG--PQEGVYHVLLA 573
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/605 (32%), Positives = 329/605 (54%), Gaps = 1/605 (0%)
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL F M P T+ + CA+RGD +G+ +H ++ G++ + + L N
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEF 178
MY KC + A+ VFD R+ ++W +L++ Y + G +++ + + + G
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ SVL ACA L + H+ + LE VA +++ Y KC + A VF +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ +W+A+I GYAQ G + EA+ LF +M G+ ++V+ L A ++ G
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H L++++G S V N ++ YSKC+ ++ + FDE+D VSWNA+I G +
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+A+ L M E P+ +T +++ +DI + H ++ D +V + +
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAKCGR+N AR +F+ +++++WN M+ GY HG G+ A+E++ M+ I P
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVP 462
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N+ TF+ VLSAC H GLV+EG YF SM D+G+ P M+H ++V L G+ A+ F
Sbjct: 463 NETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAF 522
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I+ P++P V+ +L CK HK++ L +A+KI P++ H++L+N+YA A+MW
Sbjct: 523 IQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMW 582
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
+ A+VR M++ L+K G S +L+N++H F + Q +++ + +L +
Sbjct: 583 KDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAV 642
Query: 659 GYVPD 663
GYVPD
Sbjct: 643 GYVPD 647
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 230/435 (52%), Gaps = 2/435 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ G + L MY K R DA+++FD MP R+ ++W+AL++G+++ G+ +A
Sbjct: 85 LAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMA 144
Query: 61 LN-YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ R+ P+ T V + ACA+ + +E H RSGLE +V+ +++
Sbjct: 145 MEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILD 204
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG + +A+ VFD +NS+SW +++ Y Q G+ L +F + GV +++ S
Sbjct: 205 AYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVS 264
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ L AC LG L GM++H L+ + L+ + V LI +Y+KC+++DLAS VF +
Sbjct: 265 VLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELD 324
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+W+A+I G AQ G + +A+ LF +M + P T V+ A AD+ + + R
Sbjct: 325 RRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARW 384
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H I++ +V ++D Y+KC + + F+ E V++WNA+I G+ +
Sbjct: 385 IHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGF 444
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
A+EL ++M G PN T+ ++L+ S ++ G++ + + G + +
Sbjct: 445 GKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYG 504
Query: 419 ALVDMYAKCGRLNDA 433
+VD+ + G+L++A
Sbjct: 505 TMVDLLGRAGKLDEA 519
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 174/369 (47%), Gaps = 4/369 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I SG V +L Y K I A+ +FD MP +N +SW+A+I G++Q G AL
Sbjct: 188 IRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREAL 247
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F MV ++ + + A+ AC G G +H + R GL+ N V N LI MY
Sbjct: 248 ALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMY 307
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + A VFD R +SW +++ Q G +++F + V F+
Sbjct: 308 SKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLV 367
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SV+ A A + + IH + L+ D +V LI++YAKC ++++A +F++ +
Sbjct: 368 SVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER 427
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-L 300
+ W+A+I GY G A++LF +M S G++P+E TF VL A + GR+
Sbjct: 428 HVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYF 487
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
S+ G T++D + L+E+ +M +S + L +C
Sbjct: 488 TSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLS---VYGAMLGACKL 544
Query: 361 GEAIELLKD 369
+ +EL ++
Sbjct: 545 HKNVELAEE 553
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 144/289 (49%), Gaps = 6/289 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G NV N L+ MY K R++ A +FDE+ R +SW+A+I G +Q G E A
Sbjct: 288 LVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDA 347
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M ++P+ +T V + A A D + IHG R L+ + +V LI+M
Sbjct: 348 VRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 407
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG ++ A+ +F+++ ER+ I+W +++ Y G +++F + G+ +E +
Sbjct: 408 YAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL AC+ G + G + S+ LE +++L + KLD A +
Sbjct: 468 LSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP 527
Query: 240 L-PDLTAWSALIGGYAQLGKACE-AIDLFVKMFSSGLMPSEVTFSYVLG 286
+ P L+ + A++G +L K E A + K+F G P E + +L
Sbjct: 528 MDPGLSVYGAMLGA-CKLHKNVELAEESAQKIFELG--PQEGVYHVLLA 573
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/660 (30%), Positives = 356/660 (53%), Gaps = 1/660 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF ++ N L+ MY + + A+++FDEMP R+++SW++LISG+S G E AL +
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ + P+ +T + A + + G+ +HG +SG+ V+N L+ MY K
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ A+ VFD R+S+S+ +++ Y + +++FL + +SVL
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFL-ENLDQFKPDLLTVSSVL 314
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC L +L + I++ + K + V LI++YAKC + A VF++++ D
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTV 374
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+++I GY Q G EA+ LF M +T+ ++ + + G+ LHS
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNG 434
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK G V+N ++D Y+KC + +SLK F M D V+WN +I+ + + +
Sbjct: 435 IKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGL 494
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ M P++ T+ L + + + A GK+ HCC+++ G++S + IG+AL++MY
Sbjct: 495 QVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMY 554
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+KCG L ++ +VF+ +S +++V+W M+ Y +G G +ALE ++ M+++ I P+ FI
Sbjct: 555 SKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFI 614
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
++ AC H GLV+EG F M + I P ++H A VV L + + +A EFI++ PI
Sbjct: 615 AIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPI 674
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+P+ +W +L C+T D+ + +I+ +P+D I+ SN YA WD+ + +
Sbjct: 675 KPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLI 734
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDP 664
RK +K+K + K+ G SW E+ +H FS+ + Q +++ + L + GY+PDP
Sbjct: 735 RKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDP 794
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 176/318 (55%), Gaps = 2/318 (0%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-LPDLTAWSALI 250
NL +IH+LV L+ F + LI+ Y+ + + VF + ++ W+++I
Sbjct: 19 NLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSII 78
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
+++ G EA++ + K+ S + P + TF V+ A A + + G ++ I+ MGF
Sbjct: 79 RAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFE 138
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S FV N ++D YS+ LL + + FDEM D+VSWN+LI+G+ + +Y EA+E+ ++
Sbjct: 139 SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
P+ +T S++L ++ ++ G+ H +K G +S VV+ + LV MY K R
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
DAR+VFD + ++ VS+NTM+ GY + + E++ ++ + ++ KP+ T VL AC
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLTVSSVLRAC 317
Query: 491 VHIGLVEEGWHYFNSMIR 508
H+ + + +N M++
Sbjct: 318 GHLRDLSLAKYIYNYMLK 335
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 123/226 (54%), Gaps = 1/226 (0%)
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
M + V+ ++ A + R++H+L+I +G S F + ++D YS SL
Sbjct: 1 MQTRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLS 60
Query: 335 TFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
F + +V WN++I + + EA+E + P+ YT+ +++ + +
Sbjct: 61 VFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
E G + I+ GF+S++ +G+ALVDMY++ G L AR+VFD + ++LVSWN+++
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLIS 180
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
GY+ HG EALEIY ++ + I P+ T VL A ++ +V++G
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/614 (32%), Positives = 331/614 (53%), Gaps = 6/614 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V ++ +Y K + +A+++F + +V+SW+ ++SG+++ AL FR M
Sbjct: 106 DVFVCTSIVDLYAKCGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMR 165
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+E N T +SAC ++H +++SG L++ V+ LI+M K G ++
Sbjct: 166 HSGVEINSCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDIN 225
Query: 129 SAQFVFDA--SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
++ VF+ + R +I V +++S+ Q + +++F + G+ EFS S+L
Sbjct: 226 LSERVFEDLDDIRRQNIVNV-MVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLL-- 282
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
+VL L +G Q+HS K L D V L +Y+KC L+ + +F I D W
Sbjct: 283 -SVLDCLNLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACW 341
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+++I G+ + G EAI LF +M G P E T + VL + + +++H ++
Sbjct: 342 ASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLR 401
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G + + +++ YSKC L+ + K +D + E D VS ++LI+G+ + L
Sbjct: 402 AGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLL 461
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+DM+ G + Y S+IL + E G Q H I K G + +GS+L+ MY+K
Sbjct: 462 FRDMVMSGFSMDSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSK 521
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
G + D K F ++ +L++W ++ YAQHG EAL++Y +M+E KP+ TF+GV
Sbjct: 522 FGSIEDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGV 581
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC H GLVEEG+ + NSM++D+GI P H +V G+ R A FI + PI+P
Sbjct: 582 LSACSHGGLVEEGYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKP 641
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+ +VW LL+ CK + D+ LG+ AA+K + +P D A++ LSN+ AE WDE + RK
Sbjct: 642 DALVWGTLLAACKIYGDVELGKLAAKKAIELEPSDAGAYVSLSNILAEVGEWDEVEETRK 701
Query: 607 IMKEKSLKKDTGCS 620
+MK ++K+ G S
Sbjct: 702 LMKGTGVQKEPGWS 715
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 149/286 (52%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG ++ + L MY K + ++ LF E+P ++ W+++ISGF++ G A+
Sbjct: 299 LKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAI 358
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M+ P+ T ++ C+S KEIHG R+G++ + + L+N Y
Sbjct: 359 GLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTY 418
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG L A+ V+D E + +S SL+S Y Q G G +F SG ++ ++ +
Sbjct: 419 SKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAIS 478
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L A + ++G Q+H+ + K L + V L+ +Y+K ++ + FS I P
Sbjct: 479 SILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGP 538
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
DL AW+ALI YAQ GKA EA+ ++ M G P +VTF VL A
Sbjct: 539 DLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSA 584
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 187/387 (48%), Gaps = 17/387 (4%)
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
F + V LI+ ++K + + A +VF + ++ W+ +I G + DLF +M
Sbjct: 5 FYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEM 64
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
+ P T+S VL A A ++E G+ + + +IK G + FV +++D Y+KC +
Sbjct: 65 CNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAKCGHM 123
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
E+ + F + VVSW +++G+ S A+E+ ++M G N T +++++
Sbjct: 124 AEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISAC 183
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF---DHLSSKNLV 446
+ Q H + K GF + + +AL+ M +K G +N + +VF D + +N+V
Sbjct: 184 GRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIV 243
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA--CVHIGLVEEGWHYFN 504
N M+ ++Q+ +A+ +++ M + + P++ + +LS C+++G + +
Sbjct: 244 --NVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCLNLGKQVHSYTLKS 301
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
+I D + +S+ +++ G +Y + P + N W ++SG + L
Sbjct: 302 GLILDLTVG------SSLFTMYSKCGSLEESYSLFQEIPFKDN-ACWASMISGFNEYGYL 354
Query: 565 --VLGRYAAEKILSTDPEDTSAHIMLS 589
+G ++ T P++++ +L+
Sbjct: 355 REAIGLFSEMLDEGTSPDESTLAAVLT 381
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 110/193 (56%), Gaps = 1/193 (0%)
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
MG+ + V ++++D +SK E++ K F + +V WN +IAG L + +YG +L
Sbjct: 1 MGYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDL 60
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+M P+ YTYS++L + + + +GK ++K G + +V + +++VD+YAK
Sbjct: 61 FHEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAK 119
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + +AR+VF +S+ ++VSW ML GY + ALEI+ M+ + ++ N T V
Sbjct: 120 CGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSV 179
Query: 487 LSACVHIGLVEEG 499
+SAC +V E
Sbjct: 180 ISACGRPSMVCEA 192
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 182/596 (30%), Positives = 329/596 (55%), Gaps = 12/596 (2%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
YV + C G + + +HG M ++G + V+ L+N Y +C A+ +FD
Sbjct: 81 YVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMP 140
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
ERN ++W +L++ Y + GL++F+ + G S ++ + L AC ++ +G Q
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H K E + L +LYAK LD A R F I ++ W+ +I A+ +
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEE 260
Query: 259 ACE-AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
E + LF+ M G+MP+E T + V+ + G+Q+ + K+G + V N
Sbjct: 261 CVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKN 320
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL-----------ASCHYGEAIEL 366
+ + Y + +E+++ F++M++ +++WNA+I+G+ A +A+ +
Sbjct: 321 STMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTI 380
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+D+ P+L+T+S+IL++ S + A+E G+Q H +K GF S+VV+ SALV+MY K
Sbjct: 381 FRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNK 440
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + DA K F + ++ V+W +M+ GY+QHG +EA++++ M+ ++PN+ TF+ +
Sbjct: 441 CGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSL 500
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC + GLVEE HYF+ M +++ I P +DH ++ +F G+ A+ FIK + EP
Sbjct: 501 LSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEP 560
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
N+ +W L++GC++H ++ L YAA+K+L P+ +I+L N+Y W + A+VRK
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRK 620
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+MK++ + SW +++K+++F + Q +L++++ L GY P
Sbjct: 621 LMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEP 676
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 253/509 (49%), Gaps = 29/509 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M +G ++ L+ Y++ S DA++LFD MPERNV++W+AL++G++ P +
Sbjct: 104 MAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALG 163
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ P++YT ++AC + D GK++HG + G E + + N L ++
Sbjct: 164 LEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSL 223
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH-GLKIFLLSRKSGVAISEFS 179
Y K G L SA F E+N I+W +++S+ + E V G+ +F+ GV +EF+
Sbjct: 224 YAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFT 283
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV+ C +L +G Q+ + FK E + V + LY + + D A R+F ++
Sbjct: 284 LTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQME 343
Query: 240 LPDLTAWSALIGGYAQL-----------GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
+ W+A+I GYAQ+ + +A+ +F + S + P TFS +L
Sbjct: 344 DASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVC 403
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ + G Q+H+ IK GF S V + +++ Y+KC ++++ K F EM V+W
Sbjct: 404 SAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWT 463
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-------KQT 401
++I+G+ EAI+L ++M G PN T+ ++L+ S +E K+
Sbjct: 464 SMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKE 523
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGL 460
+C ++P D ++DM+ + GR+ DA N W++++ G H
Sbjct: 524 YC--IEPVVDHY----GCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSH-- 575
Query: 461 GREALEIYSMMQENKIKPND-NTFIGVLS 488
G L Y+ + ++KP T+I +L+
Sbjct: 576 GNMELAFYAADKLLELKPKGIETYILLLN 604
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 192/405 (47%), Gaps = 20/405 (4%)
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G A+ +L C G+L +H + K D FVA L+N Y +C A
Sbjct: 73 GKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDA 132
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
R+F + ++ W+AL+ GY + +++FV+M G PS T L A
Sbjct: 133 RRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLAS 192
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
+ G+Q+H IK G S T + N++ Y+K L+ +L+ F + E +V++W +I
Sbjct: 193 CDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMI 252
Query: 352 AGHLASCHYGEAIE----LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
+ A E +E L DML +G PN +T ++++++ + GKQ K
Sbjct: 253 S---ACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFK 309
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ---------- 457
G ++N+ + ++ + +Y + G ++A ++F+ + ++++WN M+ GYAQ
Sbjct: 310 IGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 369
Query: 458 -HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
G +AL I+ ++ + +KP+ TF +LS C + +E+G I+ +S +
Sbjct: 370 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 429
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ +++V+++ G + A + P V W ++SG H
Sbjct: 430 VN-SALVNMYNKCGCIQDANKAFLEMPTR-TFVTWTSMISGYSQH 472
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
ML EG Y +L+ + ++ + H + K G +++ + ++LV+ Y +C
Sbjct: 69 MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSA 128
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
DAR++FD + +N+V+W ++ GY + LE++ M E P+ T L+A
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C+ V+ G I+ +G S+ L+A G A P E N +
Sbjct: 189 CLASCDVDLGKQVHGYAIK-YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKNVI 246
Query: 550 VWRCLLSGCKTHKDLV 565
W ++S C ++ V
Sbjct: 247 TWTTMISACAEDEECV 262
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/629 (31%), Positives = 342/629 (54%), Gaps = 1/629 (0%)
Query: 25 RINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVS 84
R+++A + + + + +I GF+ G+P AL +R M+ P+ +T+ V
Sbjct: 56 RMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVK 115
Query: 85 ACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSIS 144
CA G G+ HG + + GLE + + N L+ Y K GL+ A+ VFD R+ ++
Sbjct: 116 CCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVT 175
Query: 145 WVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV 203
W +++ Y G L F + V + L AC + + G +IH V
Sbjct: 176 WNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYV 235
Query: 204 FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
+ LE D V L+++Y KC ++ A VF+ + L + W+ +IGGYA + EA
Sbjct: 236 IRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAF 295
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
D F++M + GL VT +L A A + ++ GR +H +++ F + +L+ Y
Sbjct: 296 DCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMY 355
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
K +E S K F ++ +VSWN +IA ++ Y EAI L ++L + P+ +T S
Sbjct: 356 GKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMS 415
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
++ + ++ +Q H I+ G+ N +I +A++ MYA+ G + +R++FD + SK
Sbjct: 416 TVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSK 475
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
+++SWNTM++GYA HG G+ ALE++ M+ N ++PN++TF+ VL+AC GLV+EGW +F
Sbjct: 476 DVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHF 535
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
N M++++G+ P+++H + L G R +FI+S PI+P VW LL+ + D
Sbjct: 536 NLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQND 595
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
+ + YAAE+I + ++T +I+LS++YA+A W++ +VR +MKEK L++ S E
Sbjct: 596 IDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVE 655
Query: 624 LQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
L + F+ + Q +HEV N LS
Sbjct: 656 LHSTACSFANGDMSHSQSRTIHEVSNILS 684
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 195/391 (49%), Gaps = 1/391 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G +V T N L+ Y K + DA+++FD MP R++++W+ ++ G+ G+ +A
Sbjct: 133 VIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLA 192
Query: 61 LNYFRLMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L F+ M + ++ + + A++AC + GKEIHG + R GLE + V L++
Sbjct: 193 LACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLD 252
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG ++ A+ VF R ++W ++ Y F+ R G+ + +
Sbjct: 253 MYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVT 312
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++L ACA + G +H V + + L+ +Y K K++ + ++F I
Sbjct: 313 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIA 372
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
L +W+ +I Y EAI LF+++ + L P T S V+ AF + RQ
Sbjct: 373 NKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQ 432
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+HS II +G++ T + N VL Y++ + S + FD+M DV+SWN +I G+
Sbjct: 433 IHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQ 492
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
A+E+ +M + G PN T+ ++L S
Sbjct: 493 GKTALEMFDEMKYNGLQPNESTFVSVLTACS 523
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 104/196 (53%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ F P+V+ LL MY K ++ ++K+F ++ + ++SW+ +I+ + M A
Sbjct: 336 VVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEA 395
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F ++ L P+Y+T V A G R ++IH + G N+ + N +++M
Sbjct: 396 ITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHM 455
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G + +++ +FD + ++ ISW +++ Y G+ L++F + +G+ +E +
Sbjct: 456 YARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTF 515
Query: 181 ASVLGACAVLGNLKVG 196
SVL AC+V G + G
Sbjct: 516 VSVLTACSVSGLVDEG 531
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ N + N +L MY + + ++++FD+M ++VISW+ +I G++ G + A
Sbjct: 437 IIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTA 496
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F M L+PN T+V ++AC+ G G M + G+ C+ +
Sbjct: 497 LEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTD 556
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ G+ G L QF+ ++ S W SLL++
Sbjct: 557 LLGREGDLREVLQFIESMPIDPTSRVWGSLLTA 589
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+LV A GR+++A + + + N M+ G+A GL AL Y M E+ +P
Sbjct: 46 SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARP 105
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF V+ C +G ++EG + M+ G+ + S+V +A G A
Sbjct: 106 DRFTFPVVVKCCARLGGLDEG-RAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERV 164
Query: 539 IKSSPIEPNKVVWRCLLSG 557
P+ + V W ++ G
Sbjct: 165 FDGMPVR-DIVTWNTMVDG 182
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 197/614 (32%), Positives = 332/614 (54%), Gaps = 6/614 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V ++ +Y K + +A ++F +P +V+SW+ ++SG+++ AL F+ M
Sbjct: 284 DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR 343
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+E N T +SAC ++H +++SG L+S V+ LI+MY K G +
Sbjct: 344 HSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDID 403
Query: 129 SAQFVFDA--SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
++ VF+ ++R +I V +++S+ Q + +++F + G+ EFS S+L
Sbjct: 404 LSEQVFEDLDDIQRQNIVNV-MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL-- 460
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
+VL L +G Q+H K L D V L LY+KC L+ + ++F I D W
Sbjct: 461 -SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACW 519
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+++I G+ + G EAI LF +M G P E T + VL + G+++H ++
Sbjct: 520 ASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLR 579
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G + + +++ YSKC L+ + + +D + E D VS ++LI+G+ + L
Sbjct: 580 AGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLL 639
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+DM+ G + + S+IL ++ G Q H I K G + +GS+L+ MY+K
Sbjct: 640 FRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSK 699
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
G ++D K F ++ +L++W ++ YAQHG EAL++Y++M+E KP+ TF+GV
Sbjct: 700 FGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGV 759
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC H GLVEE + + NSM++D+GI P H +V G+ R A FI + I+P
Sbjct: 760 LSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKP 819
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+ +VW LL+ CK H ++ LG+ AA+K + +P D A+I LSN+ AE WDE + RK
Sbjct: 820 DALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRK 879
Query: 607 IMKEKSLKKDTGCS 620
+MK ++K+ G S
Sbjct: 880 LMKGTGVQKEPGWS 893
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 173/604 (28%), Positives = 285/604 (47%), Gaps = 43/604 (7%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G+ + + L+ ++ K R DA K+F + NV W+ +I+G +
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F M +P+ YTY ++ACAS R GK + R+ + G E + V ++++Y
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLY 295
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG ++ A VF + +SW +LS Y + + L+IF R SGV I+ +
Sbjct: 296 AKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVT 355
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF---SNI 238
SV+ AC + Q+H+ VFK D VA LI++Y+K +DL+ +VF +I
Sbjct: 356 SVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDI 415
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
Q ++ + +I ++Q K +AI LF +M GL E + +L + G+
Sbjct: 416 QRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL---GK 470
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H +K G V +++ YSKC LEES K F + D W ++I+G
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYG 530
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ EAI L +ML +G P+ T + +L + S P++ GK+ H ++ G D + +GS
Sbjct: 531 YLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGS 590
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALV+MY+KCG L AR+V+D L + VS ++++ GY+QHGL ++ ++ M +
Sbjct: 591 ALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTM 650
Query: 479 NDNTFIGVLSAC-----------VH-----IGLVEEG---------WHYFNSM-----IR 508
+ +L A VH IGL E + F S+
Sbjct: 651 DSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAF 710
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
P + +++ +A G+ A Y +K +P+KV + +LS C +H LV
Sbjct: 711 SQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSAC-SHGGLV 769
Query: 566 LGRY 569
Y
Sbjct: 770 EESY 773
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 152/556 (27%), Positives = 269/556 (48%), Gaps = 11/556 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V LL Y + DA KLFD +P+ +V+S + +ISG+ Q + E +L +F M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
E N +Y +SAC++ + + + G V + LI+++ K
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A VF SL N W ++++ + + +F ++ +SVL ACA
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L L+ G + + V KC E D FV +++LYAKC + A VFS I P + +W+
Sbjct: 263 SLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
++ GY + A A+++F +M SG+ + T + V+ A Q+H+ + K G
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381
Query: 309 FSSFTFVANTVLDFYSKC---ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
F + VA ++ YSK +L E+ + D++ ++V N +I S G+AI
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIR 439
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L ML EG + ++ ++L++ + + GKQ H +K G ++ +GS+L +Y+
Sbjct: 440 LFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYS 496
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KCG L ++ K+F + K+ W +M+ G+ ++G REA+ ++S M ++ P+++T
Sbjct: 497 KCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAA 556
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
VL+ C + G +R GI MD +++V++++ G + A + P E
Sbjct: 557 VLTVCSSHPSLPRGKEIHGYTLR-AGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-E 614
Query: 546 PNKVVWRCLLSGCKTH 561
+ V L+SG H
Sbjct: 615 LDPVSCSSLISGYSQH 630
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 183/371 (49%), Gaps = 10/371 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG ++ + L +Y K + ++ KLF +P ++ W+++ISGF++ G A+
Sbjct: 477 LKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAI 536
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M+ P+ T ++ C+S GKEIHG R+G++ + + L+NMY
Sbjct: 537 GLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMY 596
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG L A+ V+D E + +S SL+S Y Q G G +F SG + F+ +
Sbjct: 597 SKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAIS 656
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L A A+ +G Q+H+ + K L + V L+ +Y+K +D + FS I P
Sbjct: 657 SILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGP 716
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD---VKETIGGR 298
DL AW+ALI YAQ GKA EA+ ++ M G P +VTF VL A + V+E+
Sbjct: 717 DLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY--F 774
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLAS 357
L+S++ G ++D + L E+ + M + D + W L LA+
Sbjct: 775 HLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTL----LAA 830
Query: 358 CHYGEAIELLK 368
C +EL K
Sbjct: 831 CKIHGEVELGK 841
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 163/303 (53%), Gaps = 2/303 (0%)
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
+Q H L+ + L FD F+ L++ Y+ + A+++F I PD+ + + +I GY Q
Sbjct: 70 LQAH-LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQH 128
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
E++ F KM G +E+++ V+ A + ++ + + IKMG+ + V
Sbjct: 129 RLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE 188
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
+ ++D +SK E++ K F + +V WN +IAG L + +YG +L +M
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ YTYS++L + + + +GK ++K G + +V + +A+VD+YAKCG + +A +V
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEV 307
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
F + + ++VSW ML GY + ALEI+ M+ + ++ N+ T V+SAC +V
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 497 EEG 499
E
Sbjct: 368 CEA 370
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/505 (22%), Positives = 235/505 (46%), Gaps = 18/505 (3%)
Query: 93 RSGKEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
R+ K + + R L + ++ L++ Y G ++ A +FD + + +S ++S
Sbjct: 65 RTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISG 124
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
Y Q L+ F G +E S SV+ AC+ L + K F
Sbjct: 125 YKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFY 184
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
+ V LI++++K + + A +VF + ++ W+ +I G + DLF +M
Sbjct: 185 EVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCV 244
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
P T+S VL A A +++ G+ + + +IK G + FV ++D Y+KC + E
Sbjct: 245 GFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAE 303
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+++ F + VVSW +++G+ S A+E+ K+M G N T +++++
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF---DHLSSKNLVSW 448
+ Q H + K GF + + +AL+ MY+K G ++ + +VF D + +N+V
Sbjct: 364 PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-- 421
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA--CVHIGLVEEGWHYFNSM 506
N M+ ++Q +A+ +++ M + ++ ++ + +LS C+++G G+ + +
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGL 481
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL-- 564
+ D + +S+ L++ G +Y+ + P + N W ++SG + L
Sbjct: 482 VLDLTVG------SSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISGFNEYGYLRE 534
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLS 589
+G ++ T P++++ +L+
Sbjct: 535 AIGLFSEMLDDGTSPDESTLAAVLT 559
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 201/655 (30%), Positives = 350/655 (53%), Gaps = 1/655 (0%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEVALNYF 64
F+ + + L+ MY R DA +LF E+ ++ NV++W+ +I GF + G+ E +L +
Sbjct: 185 FYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVY 244
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
L ++ ++ +SAC G ++H + + G E + +V L+ MY KC
Sbjct: 245 LLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKC 304
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L+ A+ VFD + + W +++S+Y G GLKI+ + + + +VL
Sbjct: 305 KLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVL 364
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+C ++G+ G IH+ + K ++ + + L+ +Y+KC D A+ +F+ I+ D+
Sbjct: 365 SSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVV 424
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
AW ++I G+ Q K EA++ + M G P + V+ A +K G +H L
Sbjct: 425 AWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLA 484
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK G FVA++++D YSK + S F +M ++V+WN++I+ + + +I
Sbjct: 485 IKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSI 544
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
L M G P+ + +++L S + + GK H +++ S++ + +AL+DMY
Sbjct: 545 SLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMY 604
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG L A+ +F ++ NLV+WN M+ G HG +A+ ++ M+ I P+D TFI
Sbjct: 605 IKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFI 664
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
+L++C H G +EEG F M +HGI PRM+H ++V L G+ AY F+K+ PI
Sbjct: 665 SLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPI 724
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP++ +W LL C+ H ++ LG+ AA K+L +P S ++ L N+Y E + D A +
Sbjct: 725 EPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQLLNLYGENELQDRAANL 784
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
R MKEK LKK GCSW E+ N + F + + + I++++++N L ++ G
Sbjct: 785 RASMKEKGLKKTPGCSWIEVGNSIDVFFSGDSSSPRTIEIYDLLNSLRRNMRKKG 839
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/572 (25%), Positives = 280/572 (48%), Gaps = 15/572 (2%)
Query: 1 MITSGF---HPNVITYNHLLLMYVKFSRINDAQKLFDEMPE-----RNVISWSALISGFS 52
+IT GF P + T L+ Y K +A K+FD++PE ++V W+++++G+
Sbjct: 75 IITKGFFYSDPYITT--SLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYF 132
Query: 53 QIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH 112
+ G + + F M + P+ Y+ + AS G K+IHG R +
Sbjct: 133 RFGHKKEGIAQFCRMQLFGVRPDAYSL--CILLGASDGHLGYAKQIHGYSVRKVFYGDPF 190
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
+ + LI MY CG A +F ++ N ++W ++ + + G + L+++LL++
Sbjct: 191 LESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNE 250
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
V + S S L AC + GMQ+H + K E D +V L+ +Y+KC+ ++ A
Sbjct: 251 NVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDA 310
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
VF + + W+A+I Y G++ + + ++ +M + P +T + VL + V
Sbjct: 311 ENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLV 370
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
GR +H+ ++K S + + +L YSKC +++ F+ + DVV+W ++I
Sbjct: 371 GSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMI 430
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
+G + Y EA+E M G P+ +++++ + + + G H +K G +
Sbjct: 431 SGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLE 490
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+V + S+LVDMY+K + VF + KNLV+WN+++ Y ++GL ++ ++S M
Sbjct: 491 QDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQM 550
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
+ + P+ + VL + + ++ +G +IR I + +++ ++ G
Sbjct: 551 TQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQR-IPSDLQLENALIDMYIKCGF 609
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+ A + I + ++ N V W +++GC +H D
Sbjct: 610 LKYA-QHIFQNMLQTNLVTWNIMIAGCGSHGD 640
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 242/492 (49%), Gaps = 11/492 (2%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL-NSHVSNCLINMYGKCGLLSSA 130
L +TY + AC + + GK IH + G + +++ LIN Y KCG +A
Sbjct: 45 LNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNA 104
Query: 131 QFVFDASLE-----RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
VFD E ++ W S+++ Y + G G+ F + GV +S +LG
Sbjct: 105 VKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLG 164
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-LPDLT 244
A G+L QIH + D F+ GLI +Y C + A R+F ++ ++
Sbjct: 165 ASD--GHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVV 222
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
AW+ +IGG+ + G ++++++ + + +F+ L A + G Q+H +
Sbjct: 223 AWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDL 282
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K+GF + +V ++L YSKC+L+E++ FD++ WNA+I+ ++ + + +
Sbjct: 283 VKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGL 342
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ K M P+ T +N+L+ + + ++G+ H +VK SNV + SAL+ MY
Sbjct: 343 KIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMY 402
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+KCG +DA +F+ + +++V+W +M+ G+ Q+ EALE Y+ M KP+ +
Sbjct: 403 SKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMA 462
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
V+SAC + V G I+ G+ + +S+V +++ + + P+
Sbjct: 463 SVVSACTGLKNVNLGCTIHGLAIKS-GLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPL 521
Query: 545 EPNKVVWRCLLS 556
+ N V W ++S
Sbjct: 522 K-NLVAWNSIIS 532
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 215/434 (49%), Gaps = 1/434 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + LL MY K + DA+ +FD++ + W+A+IS + G
Sbjct: 282 LVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDG 341
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L ++ M + P+ T +S+C G G+ IH + + ++ N + + L+ M
Sbjct: 342 LKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTM 401
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG A +F+ R+ ++W S++S +CQ +++ L+ + G
Sbjct: 402 YSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIM 461
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASV+ AC L N+ +G IH L K LE D FVA L+++Y+K ++ VFS++ L
Sbjct: 462 ASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPL 521
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L AW+++I Y + G +I LF +M GL P V+ + VL + + V G+ +
Sbjct: 522 KNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAV 581
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +I+ S + N ++D Y KC L+ + F M + ++V+WN +IAG + +
Sbjct: 582 HGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDW 641
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSA 419
+A+ L +M G P+ T+ ++L + IE G K V+ G + +
Sbjct: 642 LKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVN 701
Query: 420 LVDMYAKCGRLNDA 433
+VD+ + GRL+DA
Sbjct: 702 IVDLLGRAGRLDDA 715
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 220/455 (48%), Gaps = 31/455 (6%)
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF-DK 212
Q G++V L+ + ++ + + F+ S+L AC L NL+ G IHS + + D
Sbjct: 29 QQGQYVDALQFY---SRNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDP 85
Query: 213 FVAMGLINLYAKCEKLDLASRVF-----SNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
++ LIN Y KC A +VF S + D+T W++++ GY + G E I F
Sbjct: 86 YITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFC 145
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
+M G+ P + +LGA +G +Q+H ++ F F+ + ++ Y C
Sbjct: 146 RMQLFGVRPDAYSLCILLGA---SDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSC 202
Query: 327 ELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY--TYS 383
++ + F E+ D+ +VV+WN +I G + + ++E+ +L + L +++
Sbjct: 203 GRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVY--LLAKNENVKLVSASFT 260
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+ L+ + +G Q HC +VK GF+++ + ++L+ MY+KC + DA VFD +S K
Sbjct: 261 STLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVK 320
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
WN M+ Y +G + L+IY M+ +I P+ T VLS+C +G + G
Sbjct: 321 KTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIH 380
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSG-CK 559
+++ I + ++++ +++ G + A + IK + V W ++SG C+
Sbjct: 381 AELVK-RPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDV----VAWGSMISGFCQ 435
Query: 560 THKDL-VLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
K + L Y + + P+ + IM S V A
Sbjct: 436 NRKYMEALEFYNSMTVYGEKPD---SDIMASVVSA 467
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 133/251 (52%), Gaps = 2/251 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I SG +V + L+ MY KF+ + +F +MP +N+++W+++IS + + G+P++++
Sbjct: 485 IKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSI 544
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F M L P+ + + + +S R GK +HG + R + + + N LI+MY
Sbjct: 545 SLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMY 604
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG L AQ +F L+ N ++W +++ G+ + + +F R G+A + +
Sbjct: 605 IKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFI 664
Query: 182 SVLGACAVLGNLKVGMQIHSLV-FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L +C G ++ G+++ L+ + +E + +++L + +LD A N+ +
Sbjct: 665 SLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPI 724
Query: 241 -PDLTAWSALI 250
PD + W +L+
Sbjct: 725 EPDRSIWLSLL 735
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/589 (32%), Positives = 320/589 (54%), Gaps = 8/589 (1%)
Query: 87 ASRGDA-RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
++RG + R G ++H + + G ++ ++N LI+MY KCG L A VFD ERN +SW
Sbjct: 14 SARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSW 73
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+L+ + GE L++F R SG + +EF+ ++ L AC G + G+QIH + +
Sbjct: 74 TALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVR 131
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
E VA L+ +Y+K A RVF I +L W+++I GYA G+ +++ +
Sbjct: 132 TGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLV 191
Query: 266 FVKMFSS-GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS--SFTFVANTVLDF 322
F +M P E TF+ +L A + + G Q+H+ + G S S +A +LD
Sbjct: 192 FREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDV 251
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
Y KC L +++ FD ++ + + W +I GH EA+ L + G + +
Sbjct: 252 YVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVL 311
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
S+++ + +D +E GKQ HC K +V + ++LVDMY KCG +A + F + +
Sbjct: 312 SSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPA 371
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
+N+VSW M+ G +HG GREA++++ MQE ++ ++ ++ +LSAC H GLV+E Y
Sbjct: 372 RNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRY 431
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
F+ + +D + P+ +H A +V L G+ R A E I S P+EP VW+ LLS C+ HK
Sbjct: 432 FSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHK 491
Query: 563 DLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWT 622
D+ +GR + +L+ D ++ ++MLSN+ AEA W E +R M+ K L+K GCSWT
Sbjct: 492 DVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWT 551
Query: 623 ELQNKMHYF-STSRFAQFQGIDLHEVMNQLSVHLFDG-GYVPDPIYSSH 669
E+ ++H+F A Q D+ + ++ + + GY D + H
Sbjct: 552 EVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALH 600
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 149/479 (31%), Positives = 242/479 (50%), Gaps = 18/479 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + + N+L+ MY K +++ A ++FD MPERNV+SW+AL+ GF G
Sbjct: 30 LMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEAREC 89
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M PN +T + AC G R+G +IHG R+G E + V+N L+ M
Sbjct: 90 LRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVM 147
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
Y K A+ VFD RN +W S++S Y G+ L +F + R+ EF+
Sbjct: 148 YSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFT 207
Query: 180 CASVLGACAVLGNLKVGMQIHS--LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
AS+L AC+ LG + G Q+H+ V + + +A L+++Y KC +L +A +VF
Sbjct: 208 FASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDG 267
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
++ + W+ +I G+AQ G+ EA+ LF + +SSG+ S V+ FAD G
Sbjct: 268 LERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQG 327
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+Q+H K VAN+++D Y KC L E+ + F EM +VVSW A+I G
Sbjct: 328 KQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKH 387
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDS 412
H EAI+L ++M EG + Y +L+ S ++ ++ I ++P +
Sbjct: 388 GHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEH 447
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQH---GLGREALEI 467
+ +VD+ + G L +A+++ + + V W T+L H +GRE ++
Sbjct: 448 Y----ACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDV 502
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 223/444 (50%), Gaps = 19/444 (4%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L A A +L+ G+Q+H+ + K D + LI++YAKC KL +A VF +
Sbjct: 8 ADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPE 67
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+AL+ G+ G+A E + LF +M SG P+E T S L A T G Q+
Sbjct: 68 RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQI 125
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + ++ GF VAN+++ YSK ++ + FD + ++ +WN++I+G+ +
Sbjct: 126 HGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQG 185
Query: 361 GEAIELLKDMLFE-GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD--SNVVIG 417
+++ + ++M P+ +T++++L S + A G Q H + G SN ++
Sbjct: 186 RDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILA 245
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
AL+D+Y KC RL A +VFD L +N + W T++VG+AQ G +EA+ ++ + ++
Sbjct: 246 GALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVR 305
Query: 478 PNDNTFIGVLSACVHIGLVEEGW--HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+ + V++ LVE+G H + + G+ + + S+V ++ G T A
Sbjct: 306 ADGHVLSSVVAVFADFALVEQGKQVHCYTAKT-PAGLDVSVAN--SLVDMYLKCGLTGEA 362
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE----DTSAHIMLSNV 591
+ P N V W +++G H GR A + E D A++ L +
Sbjct: 363 GRRFREMPAR-NVVSWTAMINGVGKHGH---GREAIDLFEEMQEEGVEADEVAYLALLSA 418
Query: 592 YAEANMWDETAK-VRKIMKEKSLK 614
+ + + DE + +I +++ ++
Sbjct: 419 CSHSGLVDECRRYFSRICQDRRMR 442
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/658 (29%), Positives = 357/658 (54%), Gaps = 1/658 (0%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H N+ + N +++ Y+K +++A+ LFD M +R ++W+ LI G++Q A F
Sbjct: 129 HKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIE 188
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M ++P++ + +S +++H + + G + VSN L++ Y K
Sbjct: 189 MGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRS 248
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A +F+ ER+S+++ +LL+ Y + G + + +F ++ G +EF+ A++L A
Sbjct: 249 LGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA 308
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
L +++ G Q+H V KC ++ FVA L++ Y+K +++ AS++F + D ++
Sbjct: 309 GIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISY 368
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ L+ YA G+ E+++LF ++ +G F+ +L A GRQ+HS I
Sbjct: 369 NVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIV 428
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
S V N+++D Y+KC E+ + F ++ V W A+I+ ++ + + ++L
Sbjct: 429 TDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKL 488
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+M + TY++I+ + + ++ GKQ H I+ G+ SNV GSALVDMYAK
Sbjct: 489 FVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAK 548
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + DA ++F + +N VSWN ++ YAQ+G G L ++ M + ++P+ + + +
Sbjct: 549 CGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSI 608
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L AC H GLVEEG YF+SM R + + P+ +H AS + + G+ A + + P EP
Sbjct: 609 LCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEP 668
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP-EDTSAHIMLSNVYAEANMWDETAKVR 605
++++W +L+ C HK+ L + AA ++ + D + ++ +SN+YA A WD KV+
Sbjct: 669 DEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVK 728
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
K M+E+ +KK SW E+++K H F+ + Q ++ + +++L + GY PD
Sbjct: 729 KAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPD 786
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 143/492 (29%), Positives = 249/492 (50%), Gaps = 6/492 (1%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
PN Y V + RGD +++ M N +N +I Y K G LS A+
Sbjct: 97 FNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHK----NIFSTNTMIMGYIKSGNLSEAR 152
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
+FD+ +R +++W L+ Y Q + +F+ + G+ S A++L
Sbjct: 153 TLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFD 212
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
++ Q+HS V K + V+ L++ Y K L LA ++F++I D ++AL+
Sbjct: 213 SVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLT 272
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
GY++ G EAI+LF KM G P+E TF+ +L A + + G+Q+H ++K F
Sbjct: 273 GYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVW 332
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
FVAN +LDFYSK + + E+ K F EM E D +S+N L+ + + E++EL K++
Sbjct: 333 NVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQ 392
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
F G + ++ +L+I++ ++ G+Q H + S +++G++LVDMYAKCG
Sbjct: 393 FTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFG 452
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
+A ++F L+ ++ V W M+ Y Q GL + L+++ MQ KI + T+ ++ AC
Sbjct: 453 EANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACA 512
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
+ + G + +I IS +++V ++A G + A + + P+ N V W
Sbjct: 513 SLASLTLGKQLHSHIIGSGYISNVFSG-SALVDMYAKCGSIKDALQMFQEMPVR-NSVSW 570
Query: 552 RCLLSGCKTHKD 563
L+S + D
Sbjct: 571 NALISAYAQNGD 582
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 232/465 (49%), Gaps = 24/465 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ ++ N LL Y K + A +LF+++PER+ ++++AL++G+S+ G A
Sbjct: 224 VIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREA 283
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+N F M P +T+ ++A D G+++HG + + N V+N L++
Sbjct: 284 INLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDF 343
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K + A +F E + IS+ L++ Y G L++F + +G F
Sbjct: 344 YSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPF 403
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A++L A+ NL +G QIHS + V L+++YAKC + A+R+FS++ +
Sbjct: 404 ATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAI 463
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
W+A+I Y Q G + + LFV+M + + T++ ++ A A + G+QL
Sbjct: 464 QSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQL 523
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS II G+ S F + ++D Y+KC ++++L+ F EM + VSWNALI+ + +
Sbjct: 524 HSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDG 583
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG---FDSNVVI- 416
+ L ++M+ G P+ + +IL S HC +V+ G FDS I
Sbjct: 584 DCTLRLFEEMVRSGLQPDSVSLLSILCACS-----------HCGLVEEGLQYFDSMTRIY 632
Query: 417 --------GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
++ +DM + GR ++A K+ + + + W+++L
Sbjct: 633 KLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVL 677
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 31/227 (13%)
Query: 304 IIKMGFSSFT-------------------------------FVANTVLDFYSKCELLEES 332
IIK GF+ T F NT++ Y K L E+
Sbjct: 92 IIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEA 151
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
FD M + V+W LI G+ + + EA L +M G P+ + + +L+ ++
Sbjct: 152 RTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEF 211
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
++ +Q H ++K G+DS +V+ ++L+D Y K L A ++F+ + ++ V++N +L
Sbjct: 212 DSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALL 271
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
GY++ G REA+ ++ MQE +P + TF +L+A + + +E G
Sbjct: 272 TGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFG 318
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 33/255 (12%)
Query: 322 FYSKCELLEESLKTFDE-MDEHDVVS-WNALI------AGHLASCHYGEAIELLKDMLFE 373
F ++C ++ L + ++++D + W +I AGH S Y + L+ +++
Sbjct: 11 FQNECRMIPLLLDGWSNYLNKNDSIKVWTCVICLIFTNAGHFGSKQYELTLSLMNNII-- 68
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
C N+ + + A + I+K GF+ N + LV + + G LN A
Sbjct: 69 KPCTR--------NLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGA 120
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVH 492
RK+FD + KN+ S NTM++GY + G EA ++ SM Q + T+ ++
Sbjct: 121 RKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAV-----TWTMLIGGYAQ 175
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL-----FACRGQTRRAYEFIKSSPIEPN 547
E + F M R HGI P DH++ L F + R+ + + +
Sbjct: 176 NNQFREAFGLFIEMGR-HGIDP--DHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDST 232
Query: 548 KVVWRCLL-SGCKTH 561
VV LL S CKT
Sbjct: 233 LVVSNSLLDSYCKTR 247
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 215/686 (31%), Positives = 353/686 (51%), Gaps = 27/686 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G +V N L+ Y + DA +LFD MPERN++SW+++I FS G E +
Sbjct: 213 VVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES 272
Query: 61 LNYFRLMVCCVLE--------PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH 112
L++ ++E P+ T V + CA + GK +HG + L+
Sbjct: 273 F----LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
++N L++MY KCG +++AQ +F + +N +SW +++ + G+ HG L +G
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD-THGTFDVLRQMLAG 387
Query: 173 ---VAISEFSCASVLGAC---AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
V E + + + C + L +LK ++H K +++ VA + YAKC
Sbjct: 388 GEDVKADEVTILNAVPVCFHESFLPSLK---ELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
L A RVF I+ + +W+ALIGG+AQ ++D ++M SGL+P T +L
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
A + +K G+++H II+ FV +VL Y C L FD M++ +VS
Sbjct: 505 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 564
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
WN +I G+L + A+ + + M+ G + + S +P++ G++ H +
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
K + + I +L+DMYAK G + + KVF+ L K+ SWN M++GY HGL +EA++
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 684
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
++ MQ P+D TF+GVL+AC H GL+ EG Y + M G+ P + H A V+ +
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 744
Query: 527 ACRGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
GQ +A + E V +W+ LLS C+ H++L +G A K+ +PE +
Sbjct: 745 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENY 804
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST-SRFAQ-FQGID 643
++LSN+YA W++ KVR+ M E SL+KD GCSW EL K+ F RF F+ +
Sbjct: 805 VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFE--E 862
Query: 644 LHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ + + L + + GY PD + H
Sbjct: 863 IKSLWSILEMKISKMGYRPDTMSVQH 888
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 232/484 (47%), Gaps = 7/484 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV-L 72
++ MY +D++ +FD + +N+ W+A+IS +S+ + + L F M+ L
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P+++TY + ACA D G +HG + ++GL + V N L++ YG G ++ A
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 133 VFDASLERNSISWVSLLSSYCQCG---EHVHGLKIFLLSRKSGVAISEFSC-ASVLGACA 188
+FD ERN +SW S++ + G E L + G + + + +VL CA
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ +G +H K L+ + + L+++Y+KC + A +F ++ +W+
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNT 363
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSG--LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
++GG++ G D+ +M + G + EVT + ++LH +K
Sbjct: 364 MVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK 423
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
F VAN + Y+KC L + + F + V SWNALI GH S +++
Sbjct: 424 QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA 483
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M G P+ +T ++L+ S + ++ GK+ H I++ + ++ + +++ +Y
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG L + +FD + K+LVSWNT++ GY Q+G AL ++ M I+ + + V
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 487 LSAC 490
AC
Sbjct: 604 FGAC 607
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 163/318 (51%), Gaps = 8/318 (2%)
Query: 183 VLGACAVLGNLKVGMQIHSLVF-KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L A ++++G +IH LV L D + +I +YA C D + VF ++
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L W+A+I Y++ E ++ F++M S + L+P T+ V+ A A + + G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L++K G FV N ++ FY + ++L+ FD M E ++VSWN++I +
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 361 GEAIELLKDMLFE----GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
E+ LL +M+ E P++ T +L + + I GK H VK D +V+
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE--N 474
+AL+DMY+KCG + +A+ +F ++KN+VSWNTM+ G++ G ++ M
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 475 KIKPNDNTFIGVLSACVH 492
+K ++ T + + C H
Sbjct: 390 DVKADEVTILNAVPVCFH 407
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 385 ILNISSDIPAIEWGKQTHCCIV-KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+L S IE G++ H + ++ V+ + ++ MYA CG +D+R VFD L SK
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 444 NLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSAC-----VHIGLVE 497
NL WN ++ Y+++ L E LE + M+ + P+ T+ V+ AC V IGL
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
G ++ D + ++V + G A + P E N V W ++
Sbjct: 210 HGLVVKTGLVEDVFVG------NALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMI 260
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 204/674 (30%), Positives = 374/674 (55%), Gaps = 10/674 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG ++ + L+ + K ++ A+K+F++M RN ++ + L+ G + E A
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 64 FRLMVCCV-LEPNYYTYVGAV---SACASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLI 118
F M + + P Y + + + A + G+E+HG + +GL + + N L+
Sbjct: 297 FMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLV 356
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
NMY KCG ++ A+ VF +++S+SW S+++ Q G + ++ + R+ + F
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S L +CA L K+G QIH K ++ + V+ L+ LYA+ L+ ++FS++
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 239 QLPDLTAWSALIGGYAQLGKAC-EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
D +W+++IG A+ ++ EA+ F+ +G + +TFS VL A + + G
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLA 356
+Q+H L +K + N ++ Y KC ++ K F M E D V+WN++I+G++
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ +A++L+ ML G + + Y+ +L+ + + +E G + H C V+ +S+VV+
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ-ENK 475
GSALVDMY+KCGRL+ A + F+ + +N SWN+M+ GYA+HG G EAL+++ M+ + +
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 716
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
P+ TF+GVLSAC H GL+EEG+ +F SM +G++PR++H + + + G+ +
Sbjct: 717 TPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKL 776
Query: 536 YEFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
+FI+ P++PN ++WR +L C + LG+ AAE + +PE+ +++L N+YA
Sbjct: 777 EDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYA 836
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W++ K RK MK+ +KK+ G SW +++ +H F + +++ + +L+
Sbjct: 837 AGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNR 896
Query: 654 HLFDGGYVPDPIYS 667
+ D GYVP ++
Sbjct: 897 KMRDAGYVPQTGFA 910
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/460 (30%), Positives = 246/460 (53%), Gaps = 12/460 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N+L+ Y++ A+K+FDEMP RN +SW+ ++SG+S+ G + AL + R MV
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 69 CCVLEPNYYTYVGAVSACASRGDARS--GKEIHGRMYRSGLELNSHVSNCLINMYGKC-G 125
+ N Y +V + AC G G++IHG M++ +++ VSN LI+MY KC G
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS-VL 184
+ A F +NS+SW S++S Y Q G+ +IF + G +E++ S V
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 185 GACAVL-GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
AC++ ++++ QI + K L D FV GL++ +AK L A +VF+ ++ +
Sbjct: 215 TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNA 274
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD--VKETIG---GR 298
+ L+ G + EA LF+ M +S + S ++ +L +F + + E +G GR
Sbjct: 275 VTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGR 333
Query: 299 QLHSLIIKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
++H +I G F + N +++ Y+KC + ++ + F M + D VSWN++I G +
Sbjct: 334 EVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+ EA+E K M P +T + L+ + + + G+Q H +K G D NV +
Sbjct: 394 GCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVS 453
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
+AL+ +YA+ G LN+ RK+F + + VSWN+++ A+
Sbjct: 454 NALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR 493
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 244/487 (50%), Gaps = 22/487 (4%)
Query: 83 VSACAS-RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERN 141
V +C RG AR H R+Y++ L+ + ++ N LIN Y + G SA+ VFD RN
Sbjct: 10 VQSCVGHRGAARF---FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN 66
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV--GMQI 199
+SW ++S Y + GEH L K G+ ++++ SVL AC +G++ + G QI
Sbjct: 67 CVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQI 126
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKC-EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
H L+FK + D V+ LI++Y KC + A F +I++ + +W+++I Y+Q G
Sbjct: 127 HGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGD 186
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG--RQLHSLIIKMGFSSFTFVA 316
A +F M G P+E TF ++ + E Q+ I K G + FV
Sbjct: 187 QRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVG 246
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
+ ++ ++K L + K F++M+ + V+ N L+ G + EA +L DM
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM---NSM 303
Query: 377 PNLYTYSNILNISS-------DIPAIEWGKQTHCCIVKPGF-DSNVVIGSALVDMYAKCG 428
++ S ++ +SS + ++ G++ H ++ G D V IG+ LV+MYAKCG
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG 363
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ DAR+VF ++ K+ VSWN+M+ G Q+G EA+E Y M+ + I P T I LS
Sbjct: 364 SIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLS 423
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
+C + + G ++ GI + +++ L+A G + S P E ++
Sbjct: 424 SCASLKWAKLGQQIHGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQ 481
Query: 549 VVWRCLL 555
V W ++
Sbjct: 482 VSWNSII 488
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 187/371 (50%), Gaps = 18/371 (4%)
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
HS ++K L+ D ++ LIN Y + A +VF + L + +W+ ++ GY++ G+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET--IGGRQLHSLIIKMGFSSFTFVAN 317
EA+ M G+ ++ F VL A ++ + GRQ+H L+ K+ ++ V+N
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 318 TVLDFYSKC-ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
++ Y KC + +L F +++ + VSWN++I+ + + A + M ++G
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 377 PNLYTYSNILNISSDI--PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P YT+ +++ + + P + +Q C I K G +++ +GS LV +AK G L+ AR
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
KVF+ + ++N V+ N ++VG + G EA +++ M + I + +++ +LS+
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF-MDMNSMIDVSPESYVILLSSFPEYS 322
Query: 495 LVEEGWHYFNSMIRDHGISPRM-DHIASV----VHLFACRG---QTRRAYEFIKSSPIEP 546
L EE + H I+ + D + + V+++A G RR + F+ +
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM----TDK 378
Query: 547 NKVVWRCLLSG 557
+ V W +++G
Sbjct: 379 DSVSWNSMITG 389
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 191/583 (32%), Positives = 318/583 (54%), Gaps = 2/583 (0%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
+ AC + GKEIHG + + GL+ + V N L+ MYG+C + A+ VFD +ER+
Sbjct: 101 LKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDV 160
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
+SW +++ S + E L++ V SE + S++ A N+++G +H+
Sbjct: 161 VSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAY 220
Query: 203 VFKCALEFDKFV--AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
V + + V L+++YAKC L LA ++F+ + + +W+A+I G + +
Sbjct: 221 VIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLE 280
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
E LF++M + P+E+T ++ G+QLH+ I++ GFS +A ++
Sbjct: 281 EGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALV 340
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
D Y KC + + FD DV+ W A+++ + + +A L M G P
Sbjct: 341 DMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKV 400
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T ++L++ + A++ GK H I K + + ++ +ALVDMYAKCG +N A ++F
Sbjct: 401 TIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEA 460
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
S+++ WN ++ G+A HG G EAL+I++ M+ +KPND TFIG+L AC H GLV EG
Sbjct: 461 ISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGK 520
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKT 560
F M+ G+ P+++H +V L G A+E IKS PI+PN +VW L++ C+
Sbjct: 521 KLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRL 580
Query: 561 HKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCS 620
HK+ LG AA ++L +PE+ ++++SN+YA AN W + A VRK MK +KK+ G S
Sbjct: 581 HKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHS 640
Query: 621 WTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
E+ +H F + Q ++E++ ++ L + GYVPD
Sbjct: 641 VIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPD 683
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 227/464 (48%), Gaps = 8/464 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V N L+LMY + + + A+ +FD+M ER+V+SWS +I S+ ++A
Sbjct: 120 VLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMA 179
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV----SNC 116
L R M + P+ V V+ A + R GK +H + R+ N H+ +
Sbjct: 180 LELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRN--SNNEHMGVPTTTA 237
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
L++MY KCG L A+ +F+ ++ +SW ++++ + G K+F+ ++ + +
Sbjct: 238 LLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPN 297
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
E + S++ C G L++G Q+H+ + + +A L+++Y KC + A +F
Sbjct: 298 EITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFD 357
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ Q D+ W+A++ YAQ +A +LF +M +SG+ P++VT +L A
Sbjct: 358 STQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDL 417
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+ +HS I K + ++D Y+KC + + + F E D+ WNA+I G
Sbjct: 418 GKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAM 477
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVV 415
+ EA+++ +M +G PN T+ +L+ S + GK+ +V G +
Sbjct: 478 HGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIE 537
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH 458
+VD+ + G L++A ++ + K N + W ++ H
Sbjct: 538 HYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 581
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 193/387 (49%), Gaps = 6/387 (1%)
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
F SVL AC + ++G +IH V K L+ D FV L+ +Y +C ++ A VF
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ D+ +WS +I ++ + A++L +M + PSEV ++ FAD G
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214
Query: 298 RQLHSLIIKMGFSSFTFVANT--VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
+ +H+ +I+ + V T +LD Y+KC L + + F+ + + VVSW A+IAG +
Sbjct: 215 KAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 274
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
S E +L M E PN T +++ A++ GKQ H I++ GF ++
Sbjct: 275 RSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLA 334
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ +ALVDMY KC + +AR +FD +++++ W ML YAQ +A ++ M+ +
Sbjct: 335 LATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 394
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
++P T + +LS C G ++ G + +S I + ++V ++A G A
Sbjct: 395 VRPTKVTIVSLLSLCAVAGALDLG-KWVHSYIDKERVEVDCILNTALVDMYAKCGDINAA 453
Query: 536 YE-FIKSSPIEPNKVVWRCLLSGCKTH 561
FI++ I + +W +++G H
Sbjct: 454 GRLFIEA--ISRDICMWNAIITGFAMH 478
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/615 (32%), Positives = 329/615 (53%), Gaps = 66/615 (10%)
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N +++ Y K G L A VFD R+S+SW +++ Y Q G +KIF+ K V
Sbjct: 45 NTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL 104
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
++F+ +VL +CA G+ +G ++HS V K L VA L+N+YAK L +A V
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164
Query: 235 FSNIQLP-------------------------------DLTAWSALIGGYAQLGKACEAI 263
F ++L D+ +W+++I G Q G EA+
Sbjct: 165 FDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEAL 224
Query: 264 DLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
F + + L P + + L A A++++ G+Q+H I++ F + V N ++
Sbjct: 225 QFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISM 284
Query: 323 YSKC-------ELLEES--------------------------LKTFDEMDEHDVVSWNA 349
Y+K ++E+S + F+ + + DVV+W A
Sbjct: 285 YAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTA 344
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I G++ + +AIE+ K M+ EG PN +T + +L+ SS + ++ GKQ H ++ G
Sbjct: 345 MIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSG 404
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHGLGREALEIY 468
+ +G+AL MYAK G +N ARKVF+ L +++ VSW +M++ AQHGLG EA+E++
Sbjct: 405 EALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELF 464
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
M IKP+ T++GVLSAC H GLVE+G YF+ M H I P + H A +V LF
Sbjct: 465 EQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGR 524
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIML 588
G + AY+F+++ P+EP+ + W LLS CK +K++ L + AAE++L +P ++ A+ L
Sbjct: 525 AGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSAL 584
Query: 589 SNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVM 648
+NVY+ WD+ AK+RK+MK + +KK+ G SW ++QNK H F Q +++++M
Sbjct: 585 ANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMM 644
Query: 649 NQLSVHLFDGGYVPD 663
+++ + G+ PD
Sbjct: 645 DKIWKEIKKMGFAPD 659
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 152/580 (26%), Positives = 258/580 (44%), Gaps = 110/580 (18%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEM------------------------ 36
M+ G +V N+L+ +Y K DA LF+EM
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 37 -------PERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASR 89
P R+ +SW+ +I G++Q+G E A+ F MV + P +T +++CA+
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
G GK++H + + GL V+N L+NMY K G L A+ VFD RN+ SW +++
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMI 180
Query: 150 SSYCQCGEHVHGLKIF-LLSRK-------------------------------SGVAISE 177
S + CG L F LLS + + +
Sbjct: 181 SLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDR 240
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR---- 233
FS AS L ACA L L G QIH + + + V LI++YAK +++A R
Sbjct: 241 FSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQ 300
Query: 234 -----------------------------VFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
+F++++ PD+ AW+A+I GY Q G +AI+
Sbjct: 301 SGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIE 360
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
+F M S G P+ T + +L A + V G+Q+H+ I+ G + V N + Y+
Sbjct: 361 VFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYA 420
Query: 325 KCELLEESLKTFDEMDEH-DVVSWNALIAGHLASCHYG---EAIELLKDMLFEGHCPNLY 380
K + + K F+ + ++ D VSW ++I +A +G EAIEL + ML G P+
Sbjct: 421 KAGSINGARKVFNLLRQNRDTVSWTSMI---MALAQHGLGEEAIELFEQMLTLGIKPDHI 477
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKP--GFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
TY +L+ + +E G+ ++ ++K D + + +VD++ + G L +A K +
Sbjct: 478 TYVGVLSACTHGGLVEQGR-SYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVE 536
Query: 439 HLS-SKNLVSWNTMLVG---YAQHGLGREALEIYSMMQEN 474
++ ++++W ++L Y L + A E +++ N
Sbjct: 537 NMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPN 576
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/557 (24%), Positives = 237/557 (42%), Gaps = 135/557 (24%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALIS--------------- 49
G H V N LL MY K + A+ +FD M RN SW+A+IS
Sbjct: 137 GLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQF 196
Query: 50 ----------------GFSQIGMPEVALNYF-RLMVCCVLEPNYYTYVGAVSACASRGDA 92
G +Q G AL +F ++ L+P+ ++ A+SACA+
Sbjct: 197 ELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKL 256
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKC---------------------------- 124
GK+IHG + R+ + + V N LI+MY K
Sbjct: 257 SFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLN 316
Query: 125 -----GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
G ++ A+ +F++ + + ++W +++ Y Q G + +++F G + F+
Sbjct: 317 GYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFT 376
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI- 238
A++L A + + +L G QIH+ + V L +YAK ++ A +VF+ +
Sbjct: 377 LAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLR 436
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
Q D +W+++I AQ G EAI+LF +M + G+ P +T+ VL A
Sbjct: 437 QNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACT--------- 487
Query: 299 QLHSLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVV 345
H +++ G S F + N ++D + + LL+E+ K + M E DV+
Sbjct: 488 --HGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVI 545
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
+W +L L+SC + ++L K ++++ +
Sbjct: 546 AWGSL----LSSCKVYKNVDLAK-------------------VAAE----------RLLL 572
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL-----VSW----NTMLVGYA 456
++P +N SAL ++Y+ CG+ +DA K+ + ++ + +SW N V
Sbjct: 573 IEP---NNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGV 629
Query: 457 QHGLGREALEIYSMMQE 473
+ GL + EIY MM +
Sbjct: 630 EDGLHPQKDEIYKMMDK 646
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 157/345 (45%), Gaps = 46/345 (13%)
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L +M + TF NT+L Y+K LE++ + FD + D VSW +I G+ +
Sbjct: 30 HDLFNEMPVKT-TFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRF 88
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+AI++ DM+ + P +T +N+L + + GK+ H +VK G + V + ++L
Sbjct: 89 EDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSL 148
Query: 421 VDMYAKCGRLNDARKVFDH-------------------------------LSSKNLVSWN 449
++MYAK G L A+ VFD LS +++VSWN
Sbjct: 149 LNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWN 208
Query: 450 TMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+M+ G QHG EAL+ + S++++ +KP+ + LSAC ++ + F I
Sbjct: 209 SMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLS-----FGKQIH 263
Query: 509 DHGISPRMDHIASV----VHLFACRGQTRRAYEFIKSSPIEPNKVV-WRCLLSGCKTHKD 563
+ + D +V + ++A G A I+ S I V+ + LL+G D
Sbjct: 264 GYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGD 323
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
+ R + DP+ + M+ Y + + ++ +V K M
Sbjct: 324 ITPARQIFNSL--KDPDVVAWTAMIVG-YVQNGLNNDAIEVFKTM 365
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 37/185 (20%)
Query: 405 IVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG----- 459
+VK G +V + + L+++YAK G DA +F+ + K SWNT+L GYA+ G
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 460 ------------------------LGR--EALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+GR +A++I+ M ++K+ P T VL++C
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 494 GL--VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
G + + H F + H P + S+++++A G + A + N W
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVAN---SLLNMYAKTGDLKMAKVVFDRMKLR-NTSSW 176
Query: 552 RCLLS 556
++S
Sbjct: 177 NAMIS 181
>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 851
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 209/672 (31%), Positives = 363/672 (54%), Gaps = 19/672 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPEVALN 62
G + N L+ MY + R+ DA+K+F +P+ RN++SW+AL++ S G P L
Sbjct: 98 GLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALS--GDPRRGLE 155
Query: 63 YFR-LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
FR +V + T V + CA+ G + +G+ +HG +SG + + V N L++MY
Sbjct: 156 LFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMY 215
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYC---QCGEHVHGLKIFLLSRKSGVAISEF 178
KCG L+ A+ F + + +SW +L +Y + G L+ + V E
Sbjct: 216 AKCGELADAERAFPEA--PSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEI 273
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEF--DKFVAMGLINLYAKCEKLDLASRVFS 236
+ SVL AC+ L ++H+ + L+ DK V L+ Y +C +L A RVF+
Sbjct: 274 TVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDK-VPNALVAAYGRCGRLLHADRVFT 332
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS-GLMPSEVTFSYVLGAFADVKETI 295
+I+ +++W+ LI +AQ A AI+LF++M ++ GL P + +L A AD K +
Sbjct: 333 DIRRKTVSSWNTLISAHAQQNTAA-AIELFIQMTNACGLKPDGFSIGSLLMACADPKHLL 391
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT-FDEMDEHDVVSWNALIAGH 354
+ H I++ G T + ++L Y +C E + FD M+E V W A+I+G+
Sbjct: 392 HVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGY 451
Query: 355 LASCHYGEAIELLKDML-FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ GE+++L ++M EGHC ++ + ++ L S++ ++ GK+ HC +K +
Sbjct: 452 SQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDD 511
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNL-VSWNTMLVGYAQHGLGREALEIYSMMQ 472
+ S+L+DMY+KCG + DAR FD L +++ VSW M+ GYA +GLGREA+E+Y M+
Sbjct: 512 PFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMR 571
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH-GISPRMDHIASVVHLFACRGQ 531
++P++ T++G+L AC H G++EEG +F+ M H I +++H + V+ + + G+
Sbjct: 572 REGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGR 631
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
A + P EP+ + +LS C H + LG AE++L +P+ +++ SN+
Sbjct: 632 FADAVALMAEMPQEPDAKILSSVLSACHIHGEAELGSDVAERLLELEPDKAEHYVLASNM 691
Query: 592 YAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
YA + WD+ KVRK++++ + K+ GCSW ++ K++ F + + + L
Sbjct: 692 YAGSRRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVYSFVAGENPHPEMEQVRGMWRSL 751
Query: 652 SVHLFDGGYVPD 663
+ + GYVPD
Sbjct: 752 EERIREIGYVPD 763
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 190/391 (48%), Gaps = 11/391 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG+ N L+ MY K + DA++ F E P +V+SW+ ++ +++ A
Sbjct: 199 SGWDAPARVGNALVDMYAKCGELADAERAFPEAP--SVVSWNVMLGAYTRNREAGAAFGL 256
Query: 64 FRLMVC---CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLIN 119
R M + + T + + AC+ + +E+H R GL+ S V N L+
Sbjct: 257 LRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVA 316
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEF 178
YG+CG L A VF + SW +L+S++ Q +++F+ ++ G+ F
Sbjct: 317 AYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQ-QNTAAAIELFIQMTNACGLKPDGF 375
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV-FSN 237
S S+L ACA +L H + + LE D + L++ Y +C + + +RV F
Sbjct: 376 SIGSLLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDA 435
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIG 296
++ W A+I GY+Q G E++ LF +M S G S ++ + L A +++
Sbjct: 436 MEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRL 495
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDV-VSWNALIAGHL 355
G+++H +K F++++++D YSKC +E++ FD + D VSW A+I G+
Sbjct: 496 GKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYA 555
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
+ EA+EL M EG P+ +TY +L
Sbjct: 556 VNGLGREAVELYGKMRREGMEPDEFTYLGLL 586
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 13/224 (5%)
Query: 347 WNALIAGHLASCHYGEAIELLKDMLF--EGHCPNLYTYSNILNISS--DIPAIEWGKQTH 402
WNAL+A H + + +A+ LL +L EG P+ +T + A G+Q H
Sbjct: 32 WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVGAAAAGRQVH 91
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL--SSKNLVSWNTMLVGYAQHGL 460
K G + +G++LV MY +CGR+ DA KVF + +++N+VSWN ++ A G
Sbjct: 92 ALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMA--ALSGD 149
Query: 461 GREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
R LE++ + ++ T + VL C +G E G + + G
Sbjct: 150 PRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETG-RAVHGLAAKSGWDAPARVG 208
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
++V ++A G+ A ++ P P+ V W +L +++
Sbjct: 209 NALVDMYAKCGELADAE---RAFPEAPSVVSWNVMLGAYTRNRE 249
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 222/660 (33%), Positives = 341/660 (51%), Gaps = 35/660 (5%)
Query: 39 RNVISWSALISGFSQIGMPEVALNYFRLMVC-CVLEPNYYTYVGAVSACAS-RGD--ARS 94
R+ +S+++LIS E AL+ R M+ + + +T V + AC+ GD R
Sbjct: 131 RDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRL 190
Query: 95 GKEIHGRMYRSGLELNSHVS---NCLINMYGKCGLLSSAQFVFDASLERNS------ISW 145
G+E H + G N L++MY + GL+ AQ +F + S ++W
Sbjct: 191 GREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTW 250
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+++S Q G +++ GV + AS L AC+ L L +G ++H++V K
Sbjct: 251 NTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLK 310
Query: 206 CA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP--DLTAWSALIGGYAQLGKACEA 262
A L + FVA L+++YA EK+ A RVF + P L W+A+I GYAQ G EA
Sbjct: 311 DADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEA 370
Query: 263 IDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
++LF +M + +G PSE T S VL A A + G +H ++K G + FV N ++D
Sbjct: 371 LELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMD 430
Query: 322 FYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF--------- 372
Y++ ++ + + F +D DVVSWN LI G + H EA +L+ +M
Sbjct: 431 MYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSS 490
Query: 373 -----EGH--CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
E H PN T +L + + A GK+ H V+ +S++ +GSALVDMYA
Sbjct: 491 TTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYA 550
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS-MMQENKIKPNDNTFI 484
KCG L +R VFD L +N+++WN +++ Y HGLG EA+ ++ M + PN+ TFI
Sbjct: 551 KCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFI 610
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS-SP 543
L+AC H GLV+ G F+ M RDHG+ P D A VV + G+ AY I S P
Sbjct: 611 AALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEP 670
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
E W LL C+ H+++ LG AAE++ +P + S +++L N+Y+ A MWD++
Sbjct: 671 GEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVA 730
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
VR M+ + + K+ GCSW EL +H F + ++H M+ L + GY PD
Sbjct: 731 VRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPD 790
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 200/438 (45%), Gaps = 37/438 (8%)
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
+ S G H L+ S + F+ + + A L + + +H+ + AL
Sbjct: 35 IRSLTAAGNHAAALRALSSLSASSAQLDHFALPPAIKSAAALRDARAARSLHAAALRRAL 94
Query: 209 EFDKFVAMG--LINLYAKC--EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
A+G L+ YA+C LA + +L D ++++LI + A+D
Sbjct: 95 LHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALD 154
Query: 265 LFVKMFSSGLMP-SEVTFSYVLGAFADVKETIG---GRQLHSLIIKMGF---SSFTFVAN 317
M + G S T VL A + + G GR+ H+ +K GF F N
Sbjct: 155 ALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFN 214
Query: 318 TVLDFYSKCELLEESLKTFDEMDEH------DVVSWNALIAGHLASCHYGEAIELLKDML 371
+L Y++ L++++ F DVV+WN +I+ + EA+E+L DM+
Sbjct: 215 ALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMV 274
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSALVDMYAKCGRL 430
G P+ T+++ L S + + G++ H ++K +N + SALVDMYA ++
Sbjct: 275 SLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKV 334
Query: 431 NDARKVFDHL--SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ-ENKIKPNDNTFIGVL 487
AR+VFD + S+ L WN M+ GYAQ G+ EALE++S M+ E P++ T GVL
Sbjct: 335 ASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVL 394
Query: 488 SACVHIGLVEEGWHYFNSM---IRDHGISPRMDHIASVVHLFACRGQ---TRRAYEFIKS 541
AC EG+ +M + G++ +++ ++A G+ RR +
Sbjct: 395 PACAR----SEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAM--- 447
Query: 542 SPIEPNKVV-WRCLLSGC 558
I+P VV W L++GC
Sbjct: 448 --IDPRDVVSWNTLITGC 463
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 20/271 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG----- 55
++ G N N L+ MY + ++ A+++F + R+V+SW+ LI+G G
Sbjct: 413 VVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEA 472
Query: 56 ---MPEVALNYFRLMVCCVLE--------PNYYTYVGAVSACASRGDARSGKEIHGRMYR 104
+ E+ L E PN T + + CA+ GKEIHG R
Sbjct: 473 FQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVR 532
Query: 105 SGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKI 164
LE + V + L++MY KCG L++++ VFD RN I+W L+ +Y G + +
Sbjct: 533 HALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVAL 592
Query: 165 FLLSRKSGVAI-SEFSCASVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLY 222
F G A +E + + L AC+ G + G+++ H + ++ + ++++
Sbjct: 593 FDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVL 652
Query: 223 AKCEKLDLASRVFSNIQLPD--LTAWSALIG 251
+ +LD A + ++++ + ++AWS+L+G
Sbjct: 653 GRAGRLDEAYSIITSMEPGEQQVSAWSSLLG 683
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 215/686 (31%), Positives = 353/686 (51%), Gaps = 27/686 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G +V N L+ Y + DA +LFD MPERN++SW+++I FS G E +
Sbjct: 568 VVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES 627
Query: 61 LNYFRLMVCCVLE--------PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH 112
L++ ++E P+ T V + CA + GK +HG + L+
Sbjct: 628 F----LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 683
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
++N L++MY KCG +++AQ +F + +N +SW +++ + G+ HG L +G
Sbjct: 684 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD-THGTFDVLRQMLAG 742
Query: 173 ---VAISEFSCASVLGAC---AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
V E + + + C + L +LK ++H K +++ VA + YAKC
Sbjct: 743 GEDVKADEVTILNAVPVCFHESFLPSLK---ELHCYSLKQEFVYNELVANAFVASYAKCG 799
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
L A RVF I+ + +W+ALIGG+AQ ++D ++M SGL+P T +L
Sbjct: 800 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 859
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
A + +K G+++H II+ FV +VL Y C L FD M++ +VS
Sbjct: 860 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 919
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
WN +I G+L + A+ + + M+ G + + S +P++ G++ H +
Sbjct: 920 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 979
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
K + + I +L+DMYAK G + + KVF+ L K+ SWN M++GY HGL +EA++
Sbjct: 980 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 1039
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
++ MQ P+D TF+GVL+AC H GL+ EG Y + M G+ P + H A V+ +
Sbjct: 1040 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 1099
Query: 527 ACRGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
GQ +A + E V +W+ LLS C+ H++L +G A K+ +PE +
Sbjct: 1100 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENY 1159
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST-SRFAQ-FQGID 643
++LSN+YA W++ KVR+ M E SL+KD GCSW EL K+ F RF F+ +
Sbjct: 1160 VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFE--E 1217
Query: 644 LHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ + + L + + GY PD + H
Sbjct: 1218 IKSLWSILEMKISKMGYRPDTMSVQH 1243
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 232/484 (47%), Gaps = 7/484 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV-L 72
++ MY +D++ +FD + +N+ W+A+IS +S+ + + L F M+ L
Sbjct: 479 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 538
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P+++TY + ACA D G +HG + ++GL + V N L++ YG G ++ A
Sbjct: 539 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 598
Query: 133 VFDASLERNSISWVSLLSSYCQCG---EHVHGLKIFLLSRKSGVAISEFSC-ASVLGACA 188
+FD ERN +SW S++ + G E L + G + + + +VL CA
Sbjct: 599 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 658
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ +G +H K L+ + + L+++Y+KC + A +F ++ +W+
Sbjct: 659 REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNT 718
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSG--LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
++GG++ G D+ +M + G + EVT + ++LH +K
Sbjct: 719 MVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK 778
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
F VAN + Y+KC L + + F + V SWNALI GH S +++
Sbjct: 779 QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA 838
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M G P+ +T ++L+ S + ++ GK+ H I++ + ++ + +++ +Y
Sbjct: 839 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 898
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG L + +FD + K+LVSWNT++ GY Q+G AL ++ M I+ + + V
Sbjct: 899 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 958
Query: 487 LSAC 490
AC
Sbjct: 959 FGAC 962
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 163/318 (51%), Gaps = 8/318 (2%)
Query: 183 VLGACAVLGNLKVGMQIHSLVF-KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L A ++++G +IH LV L D + +I +YA C D + VF ++
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L W+A+I Y++ E ++ F++M S + L+P T+ V+ A A + + G +
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L++K G FV N ++ FY + ++L+ FD M E ++VSWN++I +
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624
Query: 361 GEAIELLKDMLFE----GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
E+ LL +M+ E P++ T +L + + I GK H VK D +V+
Sbjct: 625 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 684
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE--N 474
+AL+DMY+KCG + +A+ +F ++KN+VSWNTM+ G++ G ++ M
Sbjct: 685 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 744
Query: 475 KIKPNDNTFIGVLSACVH 492
+K ++ T + + C H
Sbjct: 745 DVKADEVTILNAVPVCFH 762
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 385 ILNISSDIPAIEWGKQTHCCIV-KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+L S IE G++ H + ++ V+ + ++ MYA CG +D+R VFD L SK
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504
Query: 444 NLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSAC-----VHIGLVE 497
NL WN ++ Y+++ L E LE + M+ + P+ T+ V+ AC V IGL
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
G ++ D + ++V + G A + P E N V W ++
Sbjct: 565 HGLVVKTGLVEDVFVG------NALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMI 615
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 189/552 (34%), Positives = 323/552 (58%), Gaps = 5/552 (0%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P + VS+CA G G ++H + + G + N ++ + L++MYGKCG +SSAQ +
Sbjct: 77 PTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRL 136
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD RN ++W SL+S Y G +++FL K G+ + FS ++VL C + +
Sbjct: 137 FDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDT 196
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
K+G+Q+H L KC ++ V LI+LY+K +D + +F + ++ W++++ GY
Sbjct: 197 KLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGY 256
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
A + A+ L M G+ + VT++ +L +F+ + +Q+H II+ G S +
Sbjct: 257 AHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNS 316
Query: 314 FVANTVLDFYSKC--ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE-AIELLKDM 370
++ T++ YS+C LE+ K + D +SWNA+I G L++ GE A++ M
Sbjct: 317 YLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGG-LSNLGNGEAALKCFSKM 375
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
G +L+T++++L I ++ GKQ H ++K G+ SN+ + + LV MYA+CG +
Sbjct: 376 RQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSI 435
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
NDA++VF + +++SWN++L G A HG GREA+E++ M+ + +KP++ TF+ VLSAC
Sbjct: 436 NDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSAC 495
Query: 491 VHIGLVEEGWHYFNSMIRDHGI-SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
H+GL+++G YF+ M D+ + SP +H +S+V LF+ G A +FI + PIEP
Sbjct: 496 RHVGLLDKGLEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFINTMPIEPGPS 555
Query: 550 VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK 609
V++ LLS C+ H ++ + A+K+L P D +++LSNV A WD A +RK+M
Sbjct: 556 VYKALLSACQVHGNVEIAVRCAKKLLQMCPNDPVIYVLLSNVQATVGYWDNVASIRKVMC 615
Query: 610 EKSLKKDTGCSW 621
++ ++K+ G SW
Sbjct: 616 DRGVRKEPGYSW 627
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 238/448 (53%), Gaps = 12/448 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF NV + L+ MY K ++ AQ+LFDEMP RNV++W++LISG+ +G PE+A
Sbjct: 105 IIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIA 164
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F MV ++P ++ + C D + G ++HG + G N V CLI++
Sbjct: 165 IELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDL 224
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K + +++ +FD ERN I+W S+++ Y C + V + + ++ G+ ++ +
Sbjct: 225 YSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTY 284
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA--SRVFSNI 238
+L + + +L Q+H + + LE + ++ + L+ +Y++C L ++V S +
Sbjct: 285 NCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGV 344
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D +W+A+IGG + LG A+ F KM +G+ TF+ VL A + G+
Sbjct: 345 TRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGK 404
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+L++K G+ S V N ++ Y++C + ++ + F MD HDV+SWN+L++G
Sbjct: 405 QIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHG 464
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG------KQTHCCIVKPGFDS 412
+ EA+EL + M G P+ T+ +L+ + ++ G + + P +
Sbjct: 465 YGREAVELFEQMRRSGVKPDNTTFLVVLSACRHVGLLDKGLEYFDLMRNDYSLESPTTEH 524
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHL 440
S++VD++++ G L++A + +
Sbjct: 525 Y----SSMVDLFSRAGYLSEAEDFINTM 548
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 221/438 (50%), Gaps = 18/438 (4%)
Query: 162 LKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINL 221
LK+ ++ G A + ++ +CA G++ VG+Q+HS + K + + ++ L+++
Sbjct: 64 LKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDM 123
Query: 222 YAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTF 281
Y KC + A R+F + ++ W++LI GY +G AI+LF++M G+ P+ +
Sbjct: 124 YGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSV 183
Query: 282 SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
S VL +++T G Q+H L +K GF V ++D YSK ++ S FD M E
Sbjct: 184 SAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPE 243
Query: 342 HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
++++W +++AG+ A+ L++DM G N TY+ +L+ S ++ KQ
Sbjct: 244 RNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQV 303
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKC--GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
HC I++ G +SN + LV +Y++C L D KV ++ + +SWN ++ G + G
Sbjct: 304 HCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLG 363
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
G AL+ +S M++ I + TF VL A I ++EG ++++ G ++
Sbjct: 364 NGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEG-KQIHALVLKAGYGSNLNVQ 422
Query: 520 ASVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE---- 572
+V ++A G +R + + + + W LLSGC H GR A E
Sbjct: 423 NGLVSMYARCGSINDAKRVFSLMDRHDV----ISWNSLLSGCAYHG---YGREAVELFEQ 475
Query: 573 -KILSTDPEDTSAHIMLS 589
+ P++T+ ++LS
Sbjct: 476 MRRSGVKPDNTTFLVVLS 493
>gi|297605857|ref|NP_001057684.2| Os06g0493800 [Oryza sativa Japonica Group]
gi|255677066|dbj|BAF19598.2| Os06g0493800 [Oryza sativa Japonica Group]
Length = 721
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 201/634 (31%), Positives = 347/634 (54%), Gaps = 14/634 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC--V 71
N+LLL Y + DA+ +FDEMP RNV+SWS LI+ S++G+ AL+ F M+
Sbjct: 41 NNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGVLGDALSLFAGMLRGGER 100
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
PN +T V+ CA DA +G+++H + G++ + V+ L++MY KCG + S+
Sbjct: 101 DRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSW 160
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV-----AISEFSCASVLGA 186
F + +R+ +SW S+++ G+ + +L +K V + FSC +L
Sbjct: 161 RAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSC--ILKV 218
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
V L G Q+H + K E D + L+ +Y +C +D +R+ I+ D +
Sbjct: 219 FDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRIR-HDAFSR 277
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
++L+ YA+ G EA+ +F M + + + +L + + + +++H +K
Sbjct: 278 TSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALK 337
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
F T + N ++ Y KC + S F+ ++ D +SW AL+ ++ + EA+
Sbjct: 338 NFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFF 397
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
++M+ +G +++ +++L S ++ G Q H +VK G D + + +ALV MYAK
Sbjct: 398 FREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAK 457
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + A K+F+ + ++ ++SWN ++ ++QHG A++++ MMQE + P+D TF+G+
Sbjct: 458 CGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGL 517
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LS+C +GLV EG YF M + + P+M+H +V LFA G+ A +FI + P +P
Sbjct: 518 LSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQP 577
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+++VW LL+ C+ H +L LGR AA+KIL PED S +I+LS+++A +MWDE A+ R
Sbjct: 578 DQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRT 637
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQ 640
++ + L+KD G S + Q FS F Q
Sbjct: 638 LLDFQQLRKDVGSSQLDSQG----FSDDIFNALQ 667
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 207/420 (49%), Gaps = 10/420 (2%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
+ +HG + G ++++ N L+ Y G L+ A+ VFD RN +SW L+++ +
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81
Query: 156 GEHVHGLKIFLLSRKSGV--AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
G L +F + G + F+ A+++ CA + G Q+H+ K ++ D+
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG---GYAQLGKACEAIDLFVKMF 270
VA L+++YAKC ++ + R F + +W+++I + G AI LF KM
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201
Query: 271 SSGLMPSEVTFSYVLGAFADVKETI-GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
+ P+ TFS +L F DV E + G+Q+H ++KMG + +L Y +C +
Sbjct: 202 VLKVWPTNATFSCILKVF-DVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGM 260
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP-NLYTYSNILNI 388
+E + + HD S +L+ + + EA+ + +DML GH P + +++L +
Sbjct: 261 DEITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLM-GHMPIDQSAITSLLQV 318
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
S + + K+ HC +K F + ++ +A+V +Y KCG + + VF+ L +K+ +SW
Sbjct: 319 CSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISW 378
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+L Y Q+ L +EAL + M ++ + VL AC + GW + +++
Sbjct: 379 TALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVK 438
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 160/337 (47%), Gaps = 25/337 (7%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F + + N ++ +Y K I ++ +F+ + ++ ISW+AL++ + Q + + AL +FR
Sbjct: 340 FRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFR 399
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
MV LE + + + AC++ G +IH R+ + G++ ++ V N L+ MY KCG
Sbjct: 400 EMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCG 459
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
++ A +F++ R ISW +L++S+ Q G V +++F + ++ V +++ +L
Sbjct: 460 VVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLS 519
Query: 186 ACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDL 243
+C+ +G + G + + K LE +++L+A+ + A + + PD
Sbjct: 520 SCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQ 579
Query: 244 TAWSALIG-----GYAQLGKACEAIDLFVK------------MFSSGLMPSEVTFSYVLG 286
W AL+ G LG+ L +K + +S M E + L
Sbjct: 580 LVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRTLL 639
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
F +++ +G QL S GFS F N + FY
Sbjct: 640 DFQQLRKDVGSSQLDS----QGFSDDIF--NALQPFY 670
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + N L+ MY K + A K+F+ M R +ISW+ALI+ FSQ G A
Sbjct: 436 VVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAA 495
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM-YRSGLELNSHVSNCLIN 119
+ F +M ++ P+ YT+VG +S+C+ G G E +M + LE C+++
Sbjct: 496 IQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVD 555
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHG 161
++ + G S A DA + + + W +LL+S C+ VHG
Sbjct: 556 LFARAGRFSDAMKFIDAMPCQPDQLVWEALLAS-CR----VHG 593
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 319/589 (54%), Gaps = 8/589 (1%)
Query: 87 ASRGDA-RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
++RG + R G ++H + + G ++ ++N LI+MY KCG L A VFD ERN +SW
Sbjct: 210 SARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSW 269
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+L+ + GE L++F R SG + +EF+ ++ L AC G + G+QIH + +
Sbjct: 270 TALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVR 327
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
E VA L+ +Y+K A RVF I +L W+++I GYA G+ +++ +
Sbjct: 328 TGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLV 387
Query: 266 FVKMFSS-GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS--SFTFVANTVLDF 322
F +M P E TF+ +L A + + G Q+H+ + G S S +A +LD
Sbjct: 388 FREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDV 447
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
Y KC L +++ FD ++ + + W +I GH EA+ L + G + +
Sbjct: 448 YVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVL 507
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
S+++ + +D +E GKQ HC K +V + ++LVDMY KCG +A + F + +
Sbjct: 508 SSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPA 567
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
+N+VSW M+ G +HG GREA++++ MQ ++ ++ ++ +LSAC H GLV+E Y
Sbjct: 568 RNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRY 627
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
F+ + +D + P+ +H A +V L G+ R A E I S P+EP VW+ LLS C+ HK
Sbjct: 628 FSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHK 687
Query: 563 DLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWT 622
D+ +GR + +L+ D ++ ++MLSN+ AEA W E +R M+ K L+K GCSWT
Sbjct: 688 DVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWT 747
Query: 623 ELQNKMHYF-STSRFAQFQGIDLHEVMNQLSVHLFDG-GYVPDPIYSSH 669
E+ ++H+F A Q D+ + ++ + + GY D + H
Sbjct: 748 EVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALH 796
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 149/479 (31%), Positives = 242/479 (50%), Gaps = 18/479 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + + N+L+ MY K +++ A ++FD MPERNV+SW+AL+ GF G
Sbjct: 226 LMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEAREC 285
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M PN +T + AC G R+G +IHG R+G E + V+N L+ M
Sbjct: 286 LRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVM 343
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
Y K A+ VFD RN +W S++S Y G+ L +F + R+ EF+
Sbjct: 344 YSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFT 403
Query: 180 CASVLGACAVLGNLKVGMQIHS--LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
AS+L AC+ LG + G Q+H+ V + + +A L+++Y KC +L +A +VF
Sbjct: 404 FASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDG 463
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
++ + W+ +I G+AQ G+ EA+ LF + +SSG+ S V+ FAD G
Sbjct: 464 LERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQG 523
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+Q+H K VAN+++D Y KC L E+ + F EM +VVSW A+I G
Sbjct: 524 KQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKH 583
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDS 412
H EAI+L ++M EG + Y +L+ S ++ ++ I ++P +
Sbjct: 584 GHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEH 643
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQH---GLGREALEI 467
+ +VD+ + G L +A+++ + + V W T+L H +GRE ++
Sbjct: 644 Y----ACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDV 698
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 223/444 (50%), Gaps = 19/444 (4%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L A A +L+ G+Q+H+ + K D + LI++YAKC KL +A VF +
Sbjct: 204 ADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPE 263
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+AL+ G+ G+A E + LF +M SG P+E T S L A T G Q+
Sbjct: 264 RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQI 321
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + ++ GF VAN+++ YSK ++ + FD + ++ +WN++I+G+ +
Sbjct: 322 HGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQG 381
Query: 361 GEAIELLKDMLFE-GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD--SNVVIG 417
+++ + ++M P+ +T++++L S + A G Q H + G SN ++
Sbjct: 382 RDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILA 441
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
AL+D+Y KC RL A +VFD L +N + W T++VG+AQ G +EA+ ++ + ++
Sbjct: 442 GALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVR 501
Query: 478 PNDNTFIGVLSACVHIGLVEEGW--HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+ + V++ LVE+G H + + G+ + + S+V ++ G T A
Sbjct: 502 ADGHVLSSVVAVFADFALVEQGKQVHCYTAKT-PAGLDVSVAN--SLVDMYLKCGLTGEA 558
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE----DTSAHIMLSNV 591
+ P N V W +++G H GR A + E D A++ L +
Sbjct: 559 GRRFREMPAR-NVVSWTAMINGVGKHGH---GREAIDLFEEMQAEGVEADEVAYLALLSA 614
Query: 592 YAEANMWDETAK-VRKIMKEKSLK 614
+ + + DE + +I +++ ++
Sbjct: 615 CSHSGLVDECRRYFSRICQDRRMR 638
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 215/677 (31%), Positives = 353/677 (52%), Gaps = 24/677 (3%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N L+ Y ++DA ++F MPERN++SW+++I FS G+ E M+
Sbjct: 218 DVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMM 277
Query: 69 C----CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
P+ T + CA + GK +HG + L+ V+N L++MY KC
Sbjct: 278 EKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKC 337
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK-----SGVAISEFS 179
G ++ AQ +F + +N +SW +++ + G+ +H K F L R+ + E +
Sbjct: 338 GCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGD-IH--KTFDLLRQMLAGGGDLRADEVT 394
Query: 180 CASVLGAC---AVLGNLKVGMQIHSLVFKCALEF---DKFVAMGLINLYAKCEKLDLASR 233
+ + C +VL NLK ++H K EF ++ VA + YAKC L A R
Sbjct: 395 ILNAVPVCFEESVLPNLK---ELHCYSLK--QEFVHNNELVANAFVASYAKCGSLSYAHR 449
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
VF +I+ + +W+ALIGGY+Q ++D + +M SSGL+P T +L A + +K
Sbjct: 450 VFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKS 509
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+++H LII+ +FV ++L Y C L + FD M++ +VSWN ++ G
Sbjct: 510 LKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNG 569
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+L + A+ L + M+ G P + ++ S +P++ G++ H +K + N
Sbjct: 570 YLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDN 629
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
I +++DMYAK G + ++ KVF+ L +++ SWN M++GY HG +EA++++ MQ
Sbjct: 630 AFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQR 689
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
P++ TF+GVL+AC H GLV EG Y + M G++P + H A V+ + G+
Sbjct: 690 TGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLD 749
Query: 534 RAYEF-IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
A + + EP +W LLS C+ HK+L +G A K+ ++PE +++LSN+Y
Sbjct: 750 EALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLY 809
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
A + WDE KVR+ MKE SL+KD GCSW EL K+ F + ++ + + L
Sbjct: 810 AGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLE 869
Query: 653 VHLFDGGYVPDPIYSSH 669
+ GY PD H
Sbjct: 870 REIGKMGYRPDTSSVQH 886
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 243/484 (50%), Gaps = 8/484 (1%)
Query: 15 HLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVC-CVLE 73
++ MY +D++ +FD + ++N+ W+A+IS +S+ + L F M+ L
Sbjct: 122 RVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLL 181
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ +T+ V ACA + + G +HG + ++ L + VSN L++ YG G +S A V
Sbjct: 182 PDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRV 241
Query: 134 FDASLERNSISWVSLLSSYCQCG--EHVHGLKIFLLSRKSGVAISE--FSCASVLGACAV 189
F ERN +SW S++ + G E L ++ + +A + + A+VL CA
Sbjct: 242 FKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCAR 301
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
+ VG +H L K +L+ + V L+++Y+KC ++ A +F ++ +W+ +
Sbjct: 302 DREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTM 361
Query: 250 IGGYAQLGKACEAIDLFVKMFSSG--LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+GG++ G + DL +M + G L EVT + + ++LH +K
Sbjct: 362 VGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQ 421
Query: 308 GF-SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
F + VAN + Y+KC L + + F + V SWNALI G+ S +++
Sbjct: 422 EFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDA 481
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M G P+L+T ++L+ S I +++ GK+ H I++ + + + +L+ +Y
Sbjct: 482 YFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIH 541
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG L+ A +FD + K LVSWNTM+ GY Q+G AL ++ M ++P + + + V
Sbjct: 542 CGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSV 601
Query: 487 LSAC 490
AC
Sbjct: 602 FGAC 605
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 192/365 (52%), Gaps = 11/365 (3%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H N + N + Y K ++ A ++F + + V SW+ALI G+SQ P ++L+ +
Sbjct: 425 HNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQ 484
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M L P+ +T +SAC+ + GKE+HG + R+ LE +S V L+++Y CG
Sbjct: 485 MKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGE 544
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
LS+A +FDA ++ +SW ++++ Y Q G L +F GV E S SV GA
Sbjct: 545 LSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGA 604
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
C++L +L++G + H KC LE + F+A +I++YAK + + +VF+ ++ + +W
Sbjct: 605 CSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASW 664
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD---VKETIGGRQLHSL 303
+A++ GY G+A EAI LF +M +G P E+TF VL A V E G L +
Sbjct: 665 NAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHE--GLTYLDQM 722
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLK-TFDEMDEHDVVS-WNALIAGHLASCHYG 361
G + V+D + L+E+LK +EM E V WN L L+SC
Sbjct: 723 KTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFL----LSSCRIH 778
Query: 362 EAIEL 366
+ +E+
Sbjct: 779 KNLEM 783
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 162/307 (52%), Gaps = 8/307 (2%)
Query: 192 NLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
++++G +IH LV + A L D + +I +Y+ C D + VF ++ +L W+A+I
Sbjct: 96 DIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVI 155
Query: 251 GGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
Y++ +++FVKM + SGL+P TF V+ A A V E G +H L++K
Sbjct: 156 SSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRL 215
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
FV+N ++ FY + ++L+ F M E ++VSWN++I + E LL
Sbjct: 216 VEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQ 275
Query: 370 MLFE----GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
M+ + P++ T + +L + + I GK H +K D VV+ +AL+DMY+
Sbjct: 276 MMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYS 335
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE--NKIKPNDNTF 483
KCG +NDA+ +F ++KN+VSWNTM+ G++ G + ++ M ++ ++ T
Sbjct: 336 KCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTI 395
Query: 484 IGVLSAC 490
+ + C
Sbjct: 396 LNAVPVC 402
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 6/202 (2%)
Query: 297 GRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
GR++H L+ + S+ + V+ YS C ++S FD + + ++ WNA+I+ +
Sbjct: 100 GRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYS 159
Query: 356 ASCHYGEAIELLKDMLFE-GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ Y +E+ M+ E G P+ +T+ ++ + + ++ G H +VK +V
Sbjct: 160 RNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDV 219
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +ALV Y G ++DA +VF + +NLVSWN+M+ ++ +GL E + M E
Sbjct: 220 FVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEK 279
Query: 475 K----IKPNDNTFIGVLSACVH 492
P+ T VL C
Sbjct: 280 DDEIAFTPDVATLATVLPVCAR 301
>gi|125597302|gb|EAZ37082.1| hypothetical protein OsJ_21424 [Oryza sativa Japonica Group]
Length = 671
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 201/634 (31%), Positives = 347/634 (54%), Gaps = 14/634 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC--V 71
N+LLL Y + DA+ +FDEMP RNV+SWS LI+ S++G+ AL+ F M+
Sbjct: 41 NNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGVLGDALSLFAGMLRGGER 100
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
PN +T V+ CA DA +G+++H + G++ + V+ L++MY KCG + S+
Sbjct: 101 DRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSW 160
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV-----AISEFSCASVLGA 186
F + +R+ +SW S+++ G+ + +L +K V + FSC +L
Sbjct: 161 RAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSC--ILKV 218
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
V L G Q+H + K E D + L+ +Y +C +D +R+ I+ D +
Sbjct: 219 FDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRIR-HDAFSR 277
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
++L+ YA+ G EA+ +F M + + + +L + + + +++H +K
Sbjct: 278 TSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALK 337
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
F T + N ++ Y KC + S F+ ++ D +SW AL+ ++ + EA+
Sbjct: 338 NFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFF 397
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
++M+ +G +++ +++L S ++ G Q H +VK G D + + +ALV MYAK
Sbjct: 398 FREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAK 457
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + A K+F+ + ++ ++SWN ++ ++QHG A++++ MMQE + P+D TF+G+
Sbjct: 458 CGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGL 517
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LS+C +GLV EG YF M + + P+M+H +V LFA G+ A +FI + P +P
Sbjct: 518 LSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQP 577
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+++VW LL+ C+ H +L LGR AA+KIL PED S +I+LS+++A +MWDE A+ R
Sbjct: 578 DQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRT 637
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQ 640
++ + L+KD G S + Q FS F Q
Sbjct: 638 LLDFQQLRKDVGSSQLDSQG----FSDDIFNALQ 667
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 207/420 (49%), Gaps = 10/420 (2%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
+ +HG + G ++++ N L+ Y G L+ A+ VFD RN +SW L+++ +
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81
Query: 156 GEHVHGLKIFLLSRKSGV--AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
G L +F + G + F+ A+++ CA + G Q+H+ K ++ D+
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG---GYAQLGKACEAIDLFVKMF 270
VA L+++YAKC ++ + R F + +W+++I + G AI LF KM
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201
Query: 271 SSGLMPSEVTFSYVLGAFADVKETI-GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
+ P+ TFS +L F DV E + G+Q+H ++KMG + +L Y +C +
Sbjct: 202 VLKVWPTNATFSCILKVF-DVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGM 260
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP-NLYTYSNILNI 388
+E + + HD S +L+ + + EA+ + +DML GH P + +++L +
Sbjct: 261 DEITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLM-GHMPIDQSAITSLLQV 318
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
S + + K+ HC +K F + ++ +A+V +Y KCG + + VF+ L +K+ +SW
Sbjct: 319 CSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISW 378
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+L Y Q+ L +EAL + M ++ + VL AC + GW + +++
Sbjct: 379 TALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVK 438
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 158/333 (47%), Gaps = 23/333 (6%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F + + N ++ +Y K I ++ +F+ + ++ ISW+AL++ + Q + + AL +FR
Sbjct: 340 FRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFR 399
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
MV LE + + + AC++ G +IH R+ + G++ ++ V N L+ MY KCG
Sbjct: 400 EMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCG 459
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
++ A +F++ R ISW +L++S+ Q G V +++F + ++ V +++ +L
Sbjct: 460 VVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLS 519
Query: 186 ACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDL 243
+C+ +G + G + + K LE +++L+A+ + A + + PD
Sbjct: 520 SCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQ 579
Query: 244 TAWSALIG-----GYAQLGKACEAIDLFVK------------MFSSGLMPSEVTFSYVLG 286
W AL+ G LG+ L +K + +S M E + L
Sbjct: 580 LVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRTLL 639
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
F +++ +G QL S GFS F A V
Sbjct: 640 DFQQLRKDVGSSQLDS----QGFSDDIFNALQV 668
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + N L+ MY K + A K+F+ M R +ISW+ALI+ FSQ G A
Sbjct: 436 VVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAA 495
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM-YRSGLELNSHVSNCLIN 119
+ F +M ++ P+ YT+VG +S+C+ G G E +M + LE C+++
Sbjct: 496 IQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVD 555
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHG 161
++ + G S A DA + + + W +LL+S C+ VHG
Sbjct: 556 LFARAGRFSDAMKFIDAMPCQPDQLVWEALLAS-CR----VHG 593
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 205/670 (30%), Positives = 350/670 (52%), Gaps = 97/670 (14%)
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
D +G+ +H ++ + GL L ++ N L+ Y K G L A VFD +++ SW +L+S
Sbjct: 25 DPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLIS 84
Query: 151 SYCQCGE--------------------------HVHGL---KIFLLSR--KSGVAISEFS 179
Y + G + GL I++ ++ V S+F+
Sbjct: 85 GYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFT 144
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE------------- 226
++VL +CA L +G +IHS V K L VA L+N+YAKC
Sbjct: 145 VSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMT 204
Query: 227 ------------------KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+ +LA+ F + D+ +W+++I GY+Q G EA+ +F K
Sbjct: 205 VKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSK 264
Query: 269 MFSS-GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN---------- 317
M + L P T + +L A A++++ G+Q+H+ I++ + V N
Sbjct: 265 MLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSG 324
Query: 318 -----------------------TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
++LD Y+K ++ + + F+++ + DVV+W A+I G+
Sbjct: 325 GVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGY 384
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ + + +A+EL + M+ EG PN YT + +L++SS + +E GKQ H +K G S
Sbjct: 385 VQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTP 444
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ +AL+ MYAK G +N A++VFD + K +VSW +M++ AQHGLG+EA+ ++ M
Sbjct: 445 SVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLS 504
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+KP+ T++GVLSAC H+GLVE+G Y+N M H I P + H A ++ L+ G +
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQ 564
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
AY FI+S PIEP+ + W LL+ CK HK+ L + AAE++L DP ++ A++ L+NVY+
Sbjct: 565 EAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYS 624
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W+ A+ RK+MK++ ++K+ G SW ++N++H F Q +++++M ++
Sbjct: 625 ACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWE 684
Query: 654 HLFDGGYVPD 663
+ G++PD
Sbjct: 685 EIKKMGFIPD 694
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 134/519 (25%), Positives = 245/519 (47%), Gaps = 76/519 (14%)
Query: 12 TYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
++N L+ Y K +++L EMP+ + +SW+A+I G++Q G+ + A+ F M+
Sbjct: 78 SWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISER 137
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG------ 125
+ P+ +T +S+CA+ G++IH + + GL V+ L+NMY KCG
Sbjct: 138 VPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAK 197
Query: 126 --------------------LLSSAQFVFDASL-----ERNSISWVSLLSSYCQCGEHVH 160
+ S QF AS +R+ +SW S++S Y Q G ++
Sbjct: 198 VVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLE 257
Query: 161 GLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
L IF +L+ S + F+ AS+L ACA L L +G QIH+ + + E V L
Sbjct: 258 ALAIFSKMLNEPS-LKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNAL 316
Query: 219 INLYAKCEKLDL---------------------------------ASRVFSNIQLPDLTA 245
I++YAK +++ A +F+ ++ D+ A
Sbjct: 317 ISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVA 376
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+A+I GY Q G +A++LF M + G P+ T + +L + + G+Q+H+ I
Sbjct: 377 WTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAI 436
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYG--- 361
K G SS V N ++ Y+K + + + FD + + ++VSW ++I +A +G
Sbjct: 437 KAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMI---MALAQHGLGK 493
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSAL 420
EAI L + ML G P+ TY +L+ + + +E G++ + + + + + + +
Sbjct: 494 EAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACM 553
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
+D+Y + G L +A + + + ++W ++L H
Sbjct: 554 IDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIH 592
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 126/276 (45%), Gaps = 63/276 (22%)
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
F+++L +K+ GR +H IIK G ++ N ++ FY+K L + FDEM
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 341 EHDVVSWNALIAGH---------------LASCH----------------YGEAIELLKD 369
SWN LI+G+ + C + AI +
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M+ E P+ +T SN+L+ + ++ G++ H +VK G S V + ++L++MYAKCG
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 430 LNDARKVFDHLSSKN-------------------------------LVSWNTMLVGYAQH 458
A+ VFD ++ KN +VSWN+M+ GY+Q
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 459 GLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHI 493
G EAL I+S M+ E +KP++ T +LSAC ++
Sbjct: 253 GYNLEALAIFSKMLNEPSLKPDNFTLASILSACANL 288
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 35/266 (13%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
+++IL S I G+ HC I+K G V + + L+ YAK G L A VFD +
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 442 SKNLVSWNTML-------------------------------VGYAQHGLGREALEIYSM 470
K+ SWNT++ VGY Q GL A+ +++
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M ++ P+ T VLS+C ++ G +S + G+ + S+++++A G
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIG-RKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN 590
A ++ N W L+S L EK+ D + S + M+S
Sbjct: 192 DPVIAKVVFDRMTVK-NISTWNALISLYMQSGQFELAASQFEKM--PDRDIVSWNSMISG 248
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKD 616
+ + A K++ E SLK D
Sbjct: 249 YSQQGYNLEALAIFSKMLNEPSLKPD 274
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 212/703 (30%), Positives = 367/703 (52%), Gaps = 41/703 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERN-VISWSALISGFSQIGM--- 56
M+ +GF P N LL + R+ A+ LFD+MP RN S + ++SG+S+ G
Sbjct: 25 MVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSA 84
Query: 57 ---------PEV-----------------------ALNYFRLMVCCVLEPNYYTYVGAVS 84
P + A++ FR M+ + P+ T ++
Sbjct: 85 AHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLN 144
Query: 85 ACASRGDARSG---KEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
+ G + +H + GL N V N L++ Y K GLL++A+ VF R
Sbjct: 145 LPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHR 204
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
+S+++ +++ + G H L +F R+ G+A + F+ ++VL +G+L +G Q+H
Sbjct: 205 DSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVH 264
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
LV + A + FV L++ Y+KC+ LD ++F + D +++ +I GYA A
Sbjct: 265 GLVAR-ATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCAS 323
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
+ LF +M S + ++ +L V G+Q+H+ ++ +G SS V N ++
Sbjct: 324 IVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALI 383
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
D YSKC +L+ + F ++ VSW A+I G + + EA++L M G P+
Sbjct: 384 DMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRA 443
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T+S+ + SS++ I G+Q H +++ G S+V GSAL+DMY KCG L++A + FD +
Sbjct: 444 TFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEM 503
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+N +SWN ++ YA +G + A++++ M KP+ TF+ VLSAC H GL EE
Sbjct: 504 PERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECM 563
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKT 560
YF M ++GISP +H + V+ G+ + E + P E + ++W +L C+T
Sbjct: 564 KYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRT 623
Query: 561 HKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCS 620
H + L R AAEK+ S D + +++LSN++A+A W++ A V+KIM+++ L+K+TG S
Sbjct: 624 HGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYS 683
Query: 621 WTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
W E+++K++ FS++ ++ + + +L + GY PD
Sbjct: 684 WVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPD 726
>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
Length = 917
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 192/593 (32%), Positives = 328/593 (55%), Gaps = 9/593 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ ++I N ++ MY RI++A F M ER+ ISW+ +ISG +Q G + A
Sbjct: 332 ILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEA 391
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ FR M+ + P+ +T++ + A +A+ E+ M SG+EL+ + + LINM
Sbjct: 392 VHLFRRMLAEGITPDKFTFISIIDGTARMQEAKILSEL---MVESGVELDVFLVSALINM 448
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ + G + A+ +FD +R+ + W S++SSY Q G L L R G+ ++F+
Sbjct: 449 HSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTL 508
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ L ACA L L G IH+ + V LIN+YAKC L+ A RVF
Sbjct: 509 VTALNACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQCG- 567
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L +W+ + Y Q K EA+ LF +M GL +V+F VL + E GR++
Sbjct: 568 KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSASE---GRKI 624
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+++++ G S V+ +L+ Y+ + L+E+ + F M+ D+VSWNA+IAG
Sbjct: 625 HNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLS 684
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNI--SSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EAI++ + M EG P+ ++ +LN S +++ + I G++++ ++G+
Sbjct: 685 REAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGN 744
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
A+V M+ + GRL +AR+ F+ + ++ SWN ++ +AQHG +AL+++ MQ+ +P
Sbjct: 745 AIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRP 804
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ T + VLSAC H GL+EEG+H+F SM R+ GI+ +H VV L A G+ +A E
Sbjct: 805 DSITLVSVLSACSHGGLIEEGYHHFTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEEL 864
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
++ P+ + V+W LLS CK D + E+++ DP +A+++LS+V
Sbjct: 865 LRKMPVPASYVLWMTLLSACKVQGDEKRAKRVGERVMELDPRRPAAYVVLSSV 917
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 189/682 (27%), Positives = 331/682 (48%), Gaps = 51/682 (7%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S F + + N + MY K + DA +F + + +SW++L++ F++ G + A
Sbjct: 31 SEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLDHPSQVSWNSLLAAFARDGQFQQAFQI 90
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F+ M L P+ T+V + C++ GD GK +HG + +GLE N V LI MYGK
Sbjct: 91 FQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGK 150
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + A+ VFD ++ +SW S++ +Y Q V L++F R SGV + + A+
Sbjct: 151 CGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATA 210
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
+ ACA + ++ G IHS V + E D V+ ++N+Y KC L+ A VF + P+
Sbjct: 211 ISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNT 270
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+W+A++ Q G EA+ F +M G+ P +VTF +L A + G LH
Sbjct: 271 VSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHE 330
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
I++ G+ + V N ++ YS C ++ + F M E D +SWN +I+GH + E
Sbjct: 331 CILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDE 390
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+ L + ML EG P+ +T+ +I++ ++ ++ K +V+ G + +V + SAL++
Sbjct: 391 AVHLFRRMLAEGITPDKFTFISIIDGTAR---MQEAKILSELMVESGVELDVFLVSALIN 447
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
M+++ G + +AR +FD + +++V W +++ Y QHG +AL +M+ + ND T
Sbjct: 448 MHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFT 507
Query: 483 FIGVLSACVHIGLVEEG-WHYFNSMIRDHGISP--------------------RMDHIA- 520
+ L+AC + + EG + +++ R SP R+ H
Sbjct: 508 LVTALNACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQCG 567
Query: 521 -------SVVHLFACRGQTRRAYEFIKSSPIE---PNKVVWRCLLSGCKTHKDLVLGRYA 570
++ + R + R A + + +E +KV + +L+GC + + GR
Sbjct: 568 KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSASE---GRKI 624
Query: 571 AEKILSTDPEDTSAHIM---LSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL--Q 625
+L T E S HI+ L N+Y + DE +++ M+ + + SW +
Sbjct: 625 HNILLETGME--SDHIVSTALLNMYTASKSLDEASRIFSRMEFRDI-----VSWNAMIAG 677
Query: 626 NKMHYFSTSRFAQFQGIDLHEV 647
H S FQ + L V
Sbjct: 678 KAEHGLSREAIQMFQRMQLEGV 699
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 278/526 (52%), Gaps = 11/526 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G NV+ L+ MY K + DA+++FD++ ++V+SW+++I + Q A
Sbjct: 129 VLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEA 188
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + PN TY A+SACA GK IH ++ G E + VS ++NM
Sbjct: 189 LELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNM 248
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFS 179
YGKCG L A+ VF+ N++SW +++++ Q G V L F + + G+ + +
Sbjct: 249 YGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVT 308
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++L AC+ L G +H + +C + V ++ +Y+ C ++D A+ FS +
Sbjct: 309 FITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMV 368
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D +W+ +I G+AQ G EA+ LF +M + G+ P + TF ++ A ++E +
Sbjct: 369 ERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQE---AKI 425
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
L L+++ G F+ + +++ +S+ + E+ FD+M + D+V W ++I+ ++
Sbjct: 426 LSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGS 485
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A+ + M EG N +T LN + + A+ GK H ++ GF ++ +G+A
Sbjct: 486 SDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVGNA 545
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L++MYAKCG L +A +VF H KNLVSWNT+ Y Q REAL+++ MQ +K +
Sbjct: 546 LINMYAKCGCLEEADRVF-HQCGKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKAD 604
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
+F+ VL+ C EG N ++ + G+ DHI S L
Sbjct: 605 KVSFVTVLNGCSS---ASEGRKIHNILL-ETGMES--DHIVSTALL 644
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 260/488 (53%), Gaps = 12/488 (2%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T++ + CA + G+ +H R+ S + V N I+MYGKCG + A VF +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+ +SW SLL+++ + G+ +IF + G+A + +VL C+ +G+L G
Sbjct: 64 DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGK 123
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
+H V + LE + V LI +Y KC ++ A RVF + L D+ +W+++I Y Q
Sbjct: 124 LLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHD 183
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+ EA++LF +M SG++P+ +T++ + A A V+ G+ +HS +++ GF S V+
Sbjct: 184 RCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSC 243
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL----KDMLFE 373
+++ Y KC LE++ + F+ M + VSWNA++A A +G +E L + L
Sbjct: 244 AIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVA---ACTQHGCCVEALWYFQRMQLQG 300
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G P+ T+ ILN S + +G+ H CI++ G+D+++++G+ ++ MY+ CGR+++A
Sbjct: 301 GITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNA 360
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
F + ++ +SWNT++ G+AQ G EA+ ++ M I P+ TFI ++ +
Sbjct: 361 AAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARM 420
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
+ + ++ + G+ + +++++++ + G R A + + V+W
Sbjct: 421 ----QEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMK-DRDIVMWTS 475
Query: 554 LLSGCKTH 561
++S H
Sbjct: 476 IISSYVQH 483
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 199/665 (29%), Positives = 352/665 (52%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF ++ + L+ +Y I DA++ FD+M +++ + W+ +I+G+ Q G + A
Sbjct: 36 ILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSA 95
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F+ M+ +P+ T+ +S S G+++HG + RSGL+ V N L+ +
Sbjct: 96 IKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTV 155
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K L A+ +FD + + + W ++ Y Q G +F +G+ +
Sbjct: 156 YSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITF 215
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S L + A +LK +IH + + + D ++ LI+LY KC +A ++F+
Sbjct: 216 TSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTK 275
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ ++A+I GY G +A+++F + ++P+ +TFS +L A A + GR+L
Sbjct: 276 FDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGREL 335
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H IIK V + +++ Y+KC L+ + F + D + WN++I
Sbjct: 336 HGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKP 395
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EAI L + M EG + T S L+ ++IPA+ +GK+ H ++K F+S++ SAL
Sbjct: 396 EEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSAL 455
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
++MYAKCG+LN AR VF+ + KN V+WN+++ Y HG ++L ++ M E I+P+
Sbjct: 456 INMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDH 515
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ +LS+C H G VE+G YF M ++GI +M+H A + LF G A+E I
Sbjct: 516 ITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVIT 575
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
S P P VW LL C+ H ++ L A+ +L +P+++ +++L++V A+A W
Sbjct: 576 SMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRS 635
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
K++ +MKE+ ++K GCSW E+ N F + + + ++ ++ L + L GY
Sbjct: 636 VHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHPESPQIYSLLKSLLLELRKVGY 695
Query: 661 VPDPI 665
VP +
Sbjct: 696 VPQAV 700
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/498 (27%), Positives = 257/498 (51%), Gaps = 8/498 (1%)
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ C + P+ YT+ + C + R GK I + G +L+ V++ LI +Y G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ A+ FD ++++ + W +++ Y QCGE +K+F S + A VL
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
++ G Q+H LV + L+F V L+ +Y+K +L A ++F + DL W
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVW 180
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ +IGGY Q G +A LF +M S+G+ P +TF+ L + A+ +++H I++
Sbjct: 181 NRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVR 240
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G ++ + ++D Y KC + K F+ + D+V + A+I+G++ + +A+E+
Sbjct: 241 HGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEI 300
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+ +L + PN T+S+IL + + AI+ G++ H I+K + +GSA+++MYAK
Sbjct: 301 FRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAK 360
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CGRL+ A +F +S K+ + WN+++ ++Q G EA+ ++ M +K + T
Sbjct: 361 CGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAA 420
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ---TRRAYEFIKSSP 543
LSAC +I + G MI+ S D ++++++++A G+ R + ++
Sbjct: 421 LSACANIPALHYGKEIHGFMIKGAFESDLFD-MSALINMYAKCGKLNIARLVFNLMQ--- 476
Query: 544 IEPNKVVWRCLLSGCKTH 561
E N+V W +++ H
Sbjct: 477 -EKNEVAWNSIIAAYGYH 493
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 291/541 (53%), Gaps = 24/541 (4%)
Query: 144 SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL-------GACAVLGNLKVG 196
SW + G+ H + +FL R S A + C+SVL +CA LG +G
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAA---CSSVLTSLPGALKSCAALGLRALG 77
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEK--------------LDLASRVFSNIQLPD 242
+H+L + D+F A L+NLY K L+ +VF + D
Sbjct: 78 ASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKD 137
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ +W+ L+ G A+ G+ EA+ L +M+ G P T S VL FA+ + G +LH
Sbjct: 138 VVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHG 197
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
+ GF FV ++++D Y+ C + S+K FD + D + WN+++AG + E
Sbjct: 198 FATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDE 257
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+ L + ML G P T+S+++ ++ ++ GKQ H +++ GFD NV I S+L+D
Sbjct: 258 ALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLID 317
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MY KCG ++ AR++FD + S ++VSW M++G+A HG REAL ++ M+ +KPN T
Sbjct: 318 MYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHIT 377
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F+ VL+AC H GLV++GW YFNSM +GI P ++H A++ G+ AY FI
Sbjct: 378 FLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGM 437
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
I+P VW LL CK HK+ VL A+KI +P +HI+LSN Y+ + W+E A
Sbjct: 438 KIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAA 497
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+RK M++K ++K+ CSW E++NK H F + + + +N S + GYVP
Sbjct: 498 HLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVP 557
Query: 663 D 663
+
Sbjct: 558 N 558
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 190/393 (48%), Gaps = 26/393 (6%)
Query: 81 GAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY--------------GKCGL 126
GA+ +CA+ G G +H RSG + +N L+N+Y G +
Sbjct: 63 GALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVV 122
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L S + VFD E++ +SW +L+ + G H L + + G F+ +SVL
Sbjct: 123 LESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPI 182
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
A +++ GM++H + D FV LI++YA C + D + +VF N+ + D W
Sbjct: 183 FAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILW 242
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
++++ G AQ G EA+ LF +M SG+ P VTFS ++ A ++ + G+QLH+ +I+
Sbjct: 243 NSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIR 302
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
GF F++++++D Y KC + + + FD + D+VSW A+I GH EA+ L
Sbjct: 303 GGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVL 362
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ------THCCIVKPGFDSNVVIGSAL 420
M PN T+ +L S ++ G + H IV P + + +AL
Sbjct: 363 FDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIV-PSLEHH----AAL 417
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVS-WNTML 452
D + G+L +A + K S W+T+L
Sbjct: 418 ADTLGRPGKLEEAYNFISGMKIKPTASVWSTLL 450
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 15/314 (4%)
Query: 26 INDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSA 85
+ +K+FDEMPE++V+SW+ L+ G ++ G AL R M +P+ +T +
Sbjct: 123 LESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPI 182
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
A D R G E+HG R+G + V + LI+MY C + VFD R++I W
Sbjct: 183 FAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILW 242
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
S+L+ Q G L +F SG+ + +S++ AC L +L +G Q+H+ V +
Sbjct: 243 NSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIR 302
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
+ + F++ LI++Y KC + +A R+F IQ PD+ +W+A+I G+A G A EA+ L
Sbjct: 303 GGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVL 362
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F +M L P+ +TF VL A + H+ ++ G+ F N++ D Y
Sbjct: 363 FDRMELGNLKPNHITFLAVLTACS-----------HAGLVDKGWKYF----NSMSDHYGI 407
Query: 326 CELLEESLKTFDEM 339
LE D +
Sbjct: 408 VPSLEHHAALADTL 421
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 125/251 (49%), Gaps = 6/251 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+GFH +V + L+ MY +R + + K+FD +P R+ I W+++++G +Q G + AL
Sbjct: 202 NGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGL 261
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
FR M+ ++P T+ + AC + GK++H + R G + N +S+ LI+MY K
Sbjct: 262 FRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCK 321
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG +S A+ +FD + +SW +++ + G L +F + + + +V
Sbjct: 322 CGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAV 381
Query: 184 LGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
L AC+ G + G + + + + + A L + + KL+ A S +++
Sbjct: 382 LTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAA--LADTLGRPGKLEEAYNFISGMKI 439
Query: 241 -PDLTAWSALI 250
P + WS L+
Sbjct: 440 KPTASVWSTLL 450
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF NV + L+ MY K ++ A+++FD + +++SW+A+I G + G A
Sbjct: 300 VIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREA 359
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM---YRSGLELNSHVSNCL 117
L F M L+PN+ T++ ++AC+ G G + M Y L H + L
Sbjct: 360 LVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAA--L 417
Query: 118 INMYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ G+ G L A F+ ++ + W +LL +
Sbjct: 418 ADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRA 452
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 189/570 (33%), Positives = 319/570 (55%), Gaps = 1/570 (0%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
R +IH ++ SGL + + +N G + A+ VFD E + W +++ Y
Sbjct: 85 RHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGY 144
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
++++ + SGV F+ VL AC+ + L+VG ++H +F+ E D
Sbjct: 145 SSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDV 204
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
FV GL+ LYAKC +++ A VF + ++ +W+++I GY Q G EA+ +F +M
Sbjct: 205 FVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQR 264
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
+ P + VL A+ DV++ G+ +H ++KMG + ++ Y+KC + +
Sbjct: 265 NVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVA 324
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
FD+M+ +V+ WNA+I+G+ + + EA+ L ++M+ + + T + + + +
Sbjct: 325 RSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQV 384
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+++ K I K + ++V + +AL+DM+AKCG ++ AR+VFD K++V W+ M+
Sbjct: 385 GSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMI 444
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
VGY HG G++A++++ M++ + PND TF+G+L+AC H GLVEEGW F+SM + +GI
Sbjct: 445 VGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM-KYYGI 503
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
R H A VV L G AY+FI + PIEP VW LL CK ++ + LG YAAE
Sbjct: 504 EARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAE 563
Query: 573 KILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
++ S DP +T ++ LSN+YA + +WD AKVR +M+EK L KD G S E+ K+ F
Sbjct: 564 QLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFR 623
Query: 633 TSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+ + ++ E + L L + G++P
Sbjct: 624 VGDKSHPRFKEIFEELESLERRLKEAGFIP 653
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 216/428 (50%), Gaps = 1/428 (0%)
Query: 26 INDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSA 85
I A+K+FDE PE +V W+A+I G+S A+ + M + P+ +T + A
Sbjct: 119 IGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKA 178
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
C+ GK +HG+++R G E + V N L+ +Y KCG + A+ VF+ +RN +SW
Sbjct: 179 CSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSW 238
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
S++S Y Q G + L+IF R+ V + SVL A + +L+ G IH V K
Sbjct: 239 TSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVK 298
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
LEF+ + + L +YAKC ++ +A F +++P++ W+A+I GYA+ G EA+ L
Sbjct: 299 MGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGL 358
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F +M S + +T + A A V + + I K + + FV ++D ++K
Sbjct: 359 FQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAK 418
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C ++ + + FD + DVV W+A+I G+ +AI+L M G CPN T+ +
Sbjct: 419 CGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGL 478
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L + +E G + + G ++ + +VD+ + G LN+A + +
Sbjct: 479 LTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPG 538
Query: 446 VS-WNTML 452
VS W +L
Sbjct: 539 VSVWGALL 546
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 146/283 (51%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF +V N L+ +Y K R+ A+ +F+ + +RN++SW+++ISG+ Q G+P AL F
Sbjct: 199 GFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIF 258
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M ++P++ V + A D GK IHG + + GLE + L MY KC
Sbjct: 259 GQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKC 318
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A+ FD N + W +++S Y + G + +F + + S +
Sbjct: 319 GQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAI 378
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA +G+L + + + K D FV LI+++AKC +DLA VF D+
Sbjct: 379 LACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVV 438
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
WSA+I GY G+ +AIDLF M +G+ P++VTF +L A
Sbjct: 439 VWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTA 481
>gi|359359183|gb|AEV41088.1| putative pentatricopeptide [Oryza minuta]
Length = 760
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 203/634 (32%), Positives = 328/634 (51%), Gaps = 10/634 (1%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG--MPEVALNYFR 65
P N LL +Y + S I DA L P +V+S++ ++S S+ PE FR
Sbjct: 93 PTTFLANQLLSLYARLSAIPDALALLRSTPHPSVVSYNTVLSALSRAPRHAPE-GFRLFR 151
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
+ L P + + A D R+G H + G + V L+ MY +CG
Sbjct: 152 RLHASGLRPTAPSLCALLRAAGELRDRRAGAAAHSQAVTLGFLASDIVPTALLQMYSQCG 211
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
A VFD R+ ++W ++ + G L F + G+ +E + +SVL
Sbjct: 212 APRDANQVFDEMATRDGVAWNCVMHCNVRYGYLDRALGQFCRMVRGGLPPTESTLSSVLS 271
Query: 186 ACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C G+ + G +H V K L+ D + L+++Y+ C L+ A RVF I+ PDL
Sbjct: 272 GCGRAGDCRRGRALHGWVVKLEELDPDMPLQNALLDMYSSCGDLETALRVFERIETPDLV 331
Query: 245 AWSALIGGYAQLGKACEAIDLFVKM----FSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+W+ LI G++ +G C A+D FV++ F ++P E T + V+ A A + GG+ L
Sbjct: 332 SWNTLIAGFSGVGDGCSAMDAFVQLKAVQFDEWVVPDEYTLAAVVSACATLPAMFGGKPL 391
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +IK G S FV NT+L+ Y E + F +++ DV+ W ++AGH
Sbjct: 392 HAEVIKAGLESSVFVGNTLLNMYFTNEEPGSARILFHSLNQKDVIMWTEMVAGHSLLGEG 451
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A++ ML EG+ + ++ S+ LN ++++ ++ G+ H +VK G++ N+ +L
Sbjct: 452 EMALKYFVSMLQEGYKVDSFSLSSALNSTAELAGLKQGEMLHAEVVKSGYEGNICASGSL 511
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAK G L A VF ++ +L WN+++ GY HG A +++ M + ++P+
Sbjct: 512 VDMYAKNGALPGAYLVFSNIQKPDLKCWNSIIGGYGNHGNSEMAFKLFGEMIRDGLQPDH 571
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
T+I +LSAC H GLVE+G Y+ M+ D GI P H S+V L + G A + +
Sbjct: 572 VTYISLLSACSHCGLVEKGKFYWFCMMTD-GIVPGFKHYTSMVSLLSRAGLLEEAVDLMM 630
Query: 541 SSPIEPN-KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
P +WR LLS C ++L +G +AAE+ L DP+D S H++LSN+YA WD
Sbjct: 631 KCPFTKKCPELWRILLSSCIPFRNLSIGVHAAEQALEQDPDDISTHVLLSNLYASVGKWD 690
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
A++RK ++ ++K+ G SW E++N +H FS
Sbjct: 691 LVAEIRKRIRGLMVEKEPGQSWIEMKNMVHVFSA 724
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 212/437 (48%), Gaps = 5/437 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+T GF + I LL MY + DA ++FDEM R+ ++W+ ++ + G + AL
Sbjct: 189 VTLGFLASDIVPTALLQMYSQCGAPRDANQVFDEMATRDGVAWNCVMHCNVRYGYLDRAL 248
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLINM 120
F MV L P T +S C GD R G+ +HG + + L+ + + N L++M
Sbjct: 249 GQFCRMVRGGLPPTESTLSSVLSGCGRAGDCRRGRALHGWVVKLEELDPDMPLQNALLDM 308
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL----LSRKSGVAIS 176
Y CG L +A VF+ + +SW +L++ + G+ + F+ + V
Sbjct: 309 YSSCGDLETALRVFERIETPDLVSWNTLIAGFSGVGDGCSAMDAFVQLKAVQFDEWVVPD 368
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
E++ A+V+ ACA L + G +H+ V K LE FV L+N+Y E+ A +F
Sbjct: 369 EYTLAAVVSACATLPAMFGGKPLHAEVIKAGLESSVFVGNTLLNMYFTNEEPGSARILFH 428
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
++ D+ W+ ++ G++ LG+ A+ FV M G + S L + A++
Sbjct: 429 SLNQKDVIMWTEMVAGHSLLGEGEMALKYFVSMLQEGYKVDSFSLSSALNSTAELAGLKQ 488
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G LH+ ++K G+ + +++D Y+K L + F + + D+ WN++I G+
Sbjct: 489 GEMLHAEVVKSGYEGNICASGSLVDMYAKNGALPGAYLVFSNIQKPDLKCWNSIIGGYGN 548
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ A +L +M+ +G P+ TY ++L+ S +E GK C++ G
Sbjct: 549 HGNSEMAFKLFGEMIRDGLQPDHVTYISLLSACSHCGLVEKGKFYWFCMMTDGIVPGFKH 608
Query: 417 GSALVDMYAKCGRLNDA 433
+++V + ++ G L +A
Sbjct: 609 YTSMVSLLSRAGLLEEA 625
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G +V N LL MY A+ LF + +++VI W+ +++G S +G E+A
Sbjct: 395 VIKAGLESSVFVGNTLLNMYFTNEEPGSARILFHSLNQKDVIMWTEMVAGHSLLGEGEMA 454
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L YF M+ + + ++ A+++ A + G+ +H + +SG E N S L++M
Sbjct: 455 LKYFVSMLQEGYKVDSFSLSSALNSTAELAGLKQGEMLHAEVVKSGYEGNICASGSLVDM 514
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A VF + + W S++ Y G K+F + G+ +
Sbjct: 515 YAKNGALPGAYLVFSNIQKPDLKCWNSIIGGYGNHGNSEMAFKLFGEMIRDGLQPDHVTY 574
Query: 181 ASVLGACAVLGNLKVG 196
S+L AC+ G ++ G
Sbjct: 575 ISLLSACSHCGLVEKG 590
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG+ N+ L+ MY K + A +F + + ++ W+++I G+ G E+A
Sbjct: 496 VVKSGYEGNICASGSLVDMYAKNGALPGAYLVFSNIQKPDLKCWNSIIGGYGNHGNSEMA 555
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M+ L+P++ TY+ +SAC+ G GK M G+ ++++
Sbjct: 556 FKLFGEMIRDGLQPDHVTYISLLSACSHCGLVEKGKFYWFCMMTDGIVPGFKHYTSMVSL 615
Query: 121 YGKCGLLSSA 130
+ GLL A
Sbjct: 616 LSRAGLLEEA 625
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/660 (29%), Positives = 354/660 (53%), Gaps = 1/660 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEV 59
+I + F + L+ MY SR +A LF ++ R N+++W+ +I GF + GM E
Sbjct: 573 IIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEK 632
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+L + L + ++ GA +AC+ G+++H + + + + +V L+
Sbjct: 633 SLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLT 692
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY K G + A+ VFD L++ +++S++ G L ++ + + F+
Sbjct: 693 MYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFT 752
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+S+L C+V+G+ G +H+ V K +++ + + L+ +Y KC + A VF ++
Sbjct: 753 ISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMK 812
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ AW ++I G+ Q + +A+DLF M G+ + V+ A ++ G
Sbjct: 813 ERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHL 872
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H IK G S FVA +++D YSK E + F M ++V+WN++I+ + +
Sbjct: 873 IHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGL 932
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+I LL +L G + + + +L S + A+ GK H ++ S++ + +A
Sbjct: 933 PEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENA 992
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+DMY KCG L A+ +F+++ +NLV+WN+M+ GY HG EA+ ++ M+ ++ P+
Sbjct: 993 LIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPD 1052
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ TF+ ++++C H G+VEEG + F M ++G+ PRM+H ASVV L G+ AY FI
Sbjct: 1053 EVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFI 1112
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ PI+ ++ VW CLL C+ H+++ LG A+ +L +P S ++ L N+Y E MWD
Sbjct: 1113 RGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWD 1172
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
A +R MK + LKK GCSW E++N++ F + + + I++++ ++ L ++ G
Sbjct: 1173 RAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKG 1232
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/489 (28%), Positives = 252/489 (51%), Gaps = 14/489 (2%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
+T+ + CAS + G+ IH + GL+ + +++ LINMY KCGLL SA VFD
Sbjct: 442 FTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDK 501
Query: 137 SLE-RNSIS----WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
E R+S W ++ Y + G GL F ++ G+ +S + VLG C L
Sbjct: 502 MSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLS 561
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-LPDLTAWSALI 250
G QIH + + E D ++ LI +Y+ C + A +F ++ ++ AW+ +I
Sbjct: 562 WYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMI 621
Query: 251 GGYAQLGKACEAIDLF--VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
GG+ + G ++++L+ K + L+ + T ++ + +V + GRQ+H +IKM
Sbjct: 622 GGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDF--GRQVHCDVIKMN 679
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F +V ++L Y+K +E++ K FD++ + +V NA+I+ + + +A+ L
Sbjct: 680 FQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYN 739
Query: 369 DMLFEGHCP-NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M G P + +T S++L+ S + + ++G+ H ++K SNV I SAL+ MY KC
Sbjct: 740 KMK-AGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKC 798
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G DA VF + +++V+W +M+ G+ Q+ ++AL+++ M++ +K + + V+
Sbjct: 799 GSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVI 858
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SA + + VE G H + G+ + S+V +++ G A E + SS N
Sbjct: 859 SAGLGLENVELG-HLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESA-EMVFSSMPNKN 916
Query: 548 KVVWRCLLS 556
V W ++S
Sbjct: 917 LVAWNSMIS 925
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 140/569 (24%), Positives = 264/569 (46%), Gaps = 8/569 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-----NVISWSALISGFSQIG 55
++T G + L+ MYVK + A ++FD+M E ++ W+ +I G+ + G
Sbjct: 467 IVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYG 526
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
E L F M + P+ Y+ + C +G++IHG + R+ E + ++
Sbjct: 527 HFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLET 586
Query: 116 CLINMYGKCGLLSSAQFVFDASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
LI MY C A +F R N ++W ++ + + G L+++ L++
Sbjct: 587 ALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCK 646
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ S AC+ L G Q+H V K + D +V L+ +YAK ++ A +V
Sbjct: 647 LVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKV 706
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F + ++ +A+I + G+A +A+ L+ KM + T S +L + V
Sbjct: 707 FDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSY 766
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
GR +H+ +IK S + + +L Y KC E++ F M E DVV+W ++IAG
Sbjct: 767 DFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGF 826
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ + +A++L + M EG + +++++ + +E G H +K G +S+V
Sbjct: 827 CQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDV 886
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +LVDMY+K G A VF + +KNLV+WN+M+ Y+ +GL ++ + + ++
Sbjct: 887 FVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQH 946
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
+ + VL A + + +G IR I + +++ ++ G +
Sbjct: 947 GFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQ-IPSDLQVENALIDMYVKCGCLKY 1005
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
A ++ P N V W +++G +H +
Sbjct: 1006 AQLIFENMP-RRNLVTWNSMIAGYGSHGN 1033
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 209/434 (48%), Gaps = 9/434 (2%)
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
A LE ++ V + + Q G++ L++ + S + ++F+ S+L CA L NL
Sbjct: 400 AVLELMNLPQVEEIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYH 459
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-----QLPDLTAWSALI 250
G IH+ + L+ D ++A LIN+Y KC L A +VF + PD+T W+ +I
Sbjct: 460 GRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVI 519
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
GY + G E + F +M G+ P + S VLG + + GRQ+H II+ F
Sbjct: 520 DGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFE 579
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLASCHYGEAIELLKD 369
++ ++ YS C E+ F +++ ++V+WN +I G + + + +++EL
Sbjct: 580 GDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSL 639
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
E +++ S +++G+Q HC ++K F + + ++L+ MYAK G
Sbjct: 640 AKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGS 699
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ DA+KVFD + K + N M+ + +G +AL +Y+ M+ + + T +LS
Sbjct: 700 VEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSG 759
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C +G + G +I+ S A + + C G T A + + + E + V
Sbjct: 760 CSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKC-GSTEDA-DSVFYTMKERDVV 817
Query: 550 VWRCLLSG-CKTHK 562
W +++G C+ +
Sbjct: 818 AWGSMIAGFCQNRR 831
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 164/334 (49%), Gaps = 14/334 (4%)
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
LSR V I S + + + G+ V A +++ V M ++ A+
Sbjct: 334 LSRNKTVGIRLGSGEKLDDILGSMNQVAEGVSTAGAVIALAQKYN--VKMPVLTAVARII 391
Query: 227 KLDLASR--VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYV 284
+L + V + LP + AL+ Q GK +A++L K S L ++ TF +
Sbjct: 392 DNELTPKKAVLELMNLPQVEEIKALV----QQGKYSQALELHSKTPHSALTTAKFTFPSL 447
Query: 285 LGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-- 342
L A + GR +H+ I+ MG S ++A ++++ Y KC LL +L+ FD+M E
Sbjct: 448 LKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRD 507
Query: 343 ---DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
D+ WN +I G+ H+ E + M G P+ Y+ S +L I + + G+
Sbjct: 508 SAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGR 567
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH 458
Q H I++ F+ + + +AL+ MY+ C R +A +F L ++ N+V+WN M+ G+ ++
Sbjct: 568 QIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVEN 627
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
G+ ++LE+YS+ + K +F G +AC H
Sbjct: 628 GMWEKSLELYSLAKNENCKLVSASFTGAFTACSH 661
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/651 (30%), Positives = 336/651 (51%), Gaps = 34/651 (5%)
Query: 45 SALISGFSQIGM-PEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY 103
++LI G+S G+ E L Y R++V V PN+YT+ +S C G ++HG +
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGV-TPNHYTFPFVLSGCTKIAAFCEGIQVHGSVV 158
Query: 104 RSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLK 163
+ GLE + + NCLI+ Y +CG + VF+ ERN +SW SL+ Y + +
Sbjct: 159 KMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVS 218
Query: 164 IFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYA 223
+F ++G+ S + V+ ACA L +L +G ++ + + + L+ +K + L+++Y
Sbjct: 219 LFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYM 278
Query: 224 KCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSY 283
KC +D A R+F +L ++ ++ YA+ G A EA+ + +M G P VT
Sbjct: 279 KCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLS 338
Query: 284 VLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHD 343
+ A A + + G+ H +I+ G + + N ++D Y KC E + + FD M
Sbjct: 339 AISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKT 398
Query: 344 VVSWNALIAGHLASCH-------------------------------YGEAIELLKDMLF 372
VVSWN+L AG + + + +AIEL ++M
Sbjct: 399 VVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQG 458
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EG + T I + + A E K H I K G ++ + +ALVDM+A+CG
Sbjct: 459 EGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQS 518
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A +VF+ ++ +++ +W + A G G A +++ M +KP+ F+ VL+AC H
Sbjct: 519 AMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSH 578
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
G VE+G H F S++ DHGISP+++H +V L G R A++ IKS P+EPN VVW
Sbjct: 579 GGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWG 637
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL+ C+ HK++ + YAAE+I P+ H++LSN+YA A W + A+VR ++EK
Sbjct: 638 SLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKG 697
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++K G S ++ +H F++ + + + ++ +++ D G++PD
Sbjct: 698 VRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPD 748
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 152/592 (25%), Positives = 256/592 (43%), Gaps = 72/592 (12%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V N L+ Y + ++ K+F+ M ERNV+SW++LI G+++ P+ A
Sbjct: 157 VVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEA 216
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F MV + P+ T V +SACA D G+ + + GL+LN + N L++M
Sbjct: 217 VSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDM 276
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + +A+ +FD ++RN + + ++LS+Y + G L I + G +
Sbjct: 277 YMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTM 336
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-- 238
S + A A L +L G H V + LE + +I++Y KC K ++A RVF +
Sbjct: 337 LSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSN 396
Query: 239 ---------------------------QLPDLTA--WSALIGGYAQLGKACEAIDLFVKM 269
Q+P+ A W+ +I G Q +AI+LF +M
Sbjct: 397 KTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREM 456
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
G+ VT + A + + +H+ I K G + ++D +++C
Sbjct: 457 QGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDP 516
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGE-AIELLKDMLFEGHCPNLYTYSNILNI 388
+ +++ F++M E DV +W A I G +A GE A L ML +G P++ + +L
Sbjct: 517 QSAMQVFNKMTERDVSAWTAAI-GTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTA 575
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS----KN 444
S +E G + G + +VD+ + G L R+ FD + S N
Sbjct: 576 CSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLL---REAFDLIKSMPMEPN 632
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS------------ACVH 492
V W ++L H + Y+ + N++ P +LS A V
Sbjct: 633 DVVWGSLLAACRVH--KNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVR 690
Query: 493 IGLVEEG---------------WHYFNSMIRDHGISPRMDHIASVVHLFACR 529
+ L E+G H F S H P M HIA ++ CR
Sbjct: 691 LNLREKGVRKVPGSSSVQVNGVIHEFTSGDESH---PEMTHIALMLQEMNCR 739
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 85/212 (40%), Gaps = 45/212 (21%)
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGR---LNDARKVF-----DHLSSKNLVSWNT 450
KQ HC I K G D + LV+ A+ L+ ARK F D S L N+
Sbjct: 42 KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNS 101
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR-- 508
++ GY+ GLGREA+ +Y M + PN TF VLS C I EG S+++
Sbjct: 102 LIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMG 161
Query: 509 ---------------------DH------GISPRMDHIASVVHLFACRGQTRRAYEFIK- 540
DH G+S R ++ S L + R E +
Sbjct: 162 LEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSER--NVVSWTSLICGYARGDRPKEAVSL 219
Query: 541 -----SSPIEPNKVVWRCLLSGCKTHKDLVLG 567
+ I P+ V C++S C +DL +G
Sbjct: 220 FFEMVEAGIRPSSVTMVCVISACAKLRDLDMG 251
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 319/589 (54%), Gaps = 8/589 (1%)
Query: 87 ASRGDA-RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
++RG + R G ++H + + G ++ ++N LI+MY KCG L A VFD ERN +SW
Sbjct: 14 SARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSW 73
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+L+ + GE L++F R SG + +EF+ ++ L AC G + G+QIH + +
Sbjct: 74 TALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVR 131
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
E VA L+ +Y+K A RVF I +L W+++I GYA G+ +++ +
Sbjct: 132 TGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLV 191
Query: 266 FVKMFSS-GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS--SFTFVANTVLDF 322
F +M P E TF+ +L A + + G Q+H+ + G S S +A +LD
Sbjct: 192 FREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDV 251
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
Y KC L +++ FD ++ + + W +I GH EA+ L + G + +
Sbjct: 252 YVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVL 311
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
S+++ + +D +E GKQ HC K +V + ++LVDMY KCG +A + F + +
Sbjct: 312 SSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPA 371
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
+N+VSW M+ G +HG GREA++++ MQ ++ ++ ++ +LSAC H GLV+E Y
Sbjct: 372 RNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRY 431
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
F+ + +D + P+ +H A +V L G+ R A E I S P+EP VW+ LLS C+ HK
Sbjct: 432 FSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHK 491
Query: 563 DLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWT 622
D+ +GR + +L+ D ++ ++MLSN+ AEA W E +R M+ K L+K GCSWT
Sbjct: 492 DVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWT 551
Query: 623 ELQNKMHYF-STSRFAQFQGIDLHEVMNQLSVHLFDG-GYVPDPIYSSH 669
E+ ++H+F A Q D+ + ++ + + GY D + H
Sbjct: 552 EVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALH 600
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 149/479 (31%), Positives = 242/479 (50%), Gaps = 18/479 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + + N+L+ MY K +++ A ++FD MPERNV+SW+AL+ GF G
Sbjct: 30 LMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEAREC 89
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M PN +T + AC G R+G +IHG R+G E + V+N L+ M
Sbjct: 90 LRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVM 147
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
Y K A+ VFD RN +W S++S Y G+ L +F + R+ EF+
Sbjct: 148 YSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFT 207
Query: 180 CASVLGACAVLGNLKVGMQIHS--LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
AS+L AC+ LG + G Q+H+ V + + +A L+++Y KC +L +A +VF
Sbjct: 208 FASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDG 267
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
++ + W+ +I G+AQ G+ EA+ LF + +SSG+ S V+ FAD G
Sbjct: 268 LERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQG 327
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+Q+H K VAN+++D Y KC L E+ + F EM +VVSW A+I G
Sbjct: 328 KQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKH 387
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDS 412
H EAI+L ++M EG + Y +L+ S ++ ++ I ++P +
Sbjct: 388 GHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEH 447
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQH---GLGREALEI 467
+ +VD+ + G L +A+++ + + V W T+L H +GRE ++
Sbjct: 448 Y----ACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDV 502
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 223/444 (50%), Gaps = 19/444 (4%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L A A +L+ G+Q+H+ + K D + LI++YAKC KL +A VF +
Sbjct: 8 ADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPE 67
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+AL+ G+ G+A E + LF +M SG P+E T S L A T G Q+
Sbjct: 68 RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQI 125
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + ++ GF VAN+++ YSK ++ + FD + ++ +WN++I+G+ +
Sbjct: 126 HGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQG 185
Query: 361 GEAIELLKDMLFE-GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD--SNVVIG 417
+++ + ++M P+ +T++++L S + A G Q H + G SN ++
Sbjct: 186 RDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILA 245
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
AL+D+Y KC RL A +VFD L +N + W T++VG+AQ G +EA+ ++ + ++
Sbjct: 246 GALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVR 305
Query: 478 PNDNTFIGVLSACVHIGLVEEGW--HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+ + V++ LVE+G H + + G+ + + S+V ++ G T A
Sbjct: 306 ADGHVLSSVVAVFADFALVEQGKQVHCYTAKT-PAGLDVSVAN--SLVDMYLKCGLTGEA 362
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE----DTSAHIMLSNV 591
+ P N V W +++G H GR A + E D A++ L +
Sbjct: 363 GRRFREMPAR-NVVSWTAMINGVGKHGH---GREAIDLFEEMQAEGVEADEVAYLALLSA 418
Query: 592 YAEANMWDETAK-VRKIMKEKSLK 614
+ + + DE + +I +++ ++
Sbjct: 419 CSHSGLVDECRRYFSRICQDRRMR 442
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/660 (29%), Positives = 354/660 (53%), Gaps = 1/660 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEV 59
+I + F + L+ MY SR +A LF ++ R N+++W+ +I GF + GM E
Sbjct: 168 IIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEK 227
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+L + L + ++ GA +AC+ G+++H + + + + +V L+
Sbjct: 228 SLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLT 287
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY K G + A+ VFD L++ +++S++ G L ++ + + F+
Sbjct: 288 MYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFT 347
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+S+L C+V+G+ G +H+ V K +++ + + L+ +Y KC + A VF ++
Sbjct: 348 ISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMK 407
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ AW ++I G+ Q + +A+DLF M G+ + V+ A ++ G
Sbjct: 408 ERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHL 467
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H IK G S FVA +++D YSK E + F M ++V+WN++I+ + +
Sbjct: 468 IHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGL 527
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+I LL +L G + + + +L S + A+ GK H ++ S++ + +A
Sbjct: 528 PEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENA 587
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+DMY KCG L A+ +F+++ +NLV+WN+M+ GY HG EA+ ++ M+ ++ P+
Sbjct: 588 LIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPD 647
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ TF+ ++++C H G+VEEG + F M ++G+ PRM+H ASVV L G+ AY FI
Sbjct: 648 EVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFI 707
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ PI+ ++ VW CLL C+ H+++ LG A+ +L +P S ++ L N+Y E MWD
Sbjct: 708 RGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWD 767
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
A +R MK + LKK GCSW E++N++ F + + + I++++ ++ L ++ G
Sbjct: 768 RAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKG 827
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 261/567 (46%), Gaps = 27/567 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-----NVISWSALISGFSQIG 55
++T G + L+ MYVK + A ++FD+M E ++ W+ +I G+ + G
Sbjct: 81 IVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYG 140
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
E L F C + E ++Y +G++IHG + R+ E + ++
Sbjct: 141 HFEEGLAQF----CRMQELSWYM---------------AGRQIHGYIIRNMFEGDPYLET 181
Query: 116 CLINMYGKCGLLSSAQFVFDASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
LI MY C A +F R N ++W ++ + + G L+++ L++
Sbjct: 182 ALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCK 241
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ S AC+ L G Q+H V K + D +V L+ +YAK ++ A +V
Sbjct: 242 LVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKV 301
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F + ++ +A+I + G+A +A+ L+ KM + T S +L + V
Sbjct: 302 FDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSY 361
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
GR +H+ +IK S + + +L Y KC E++ F M E DVV+W ++IAG
Sbjct: 362 DFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGF 421
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ + +A++L + M EG + +++++ + +E G H +K G +S+V
Sbjct: 422 CQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDV 481
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +LVDMY+K G A VF + +KNLV+WN+M+ Y+ +GL ++ + + ++
Sbjct: 482 FVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQH 541
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
+ + VL A + + +G IR I + +++ ++ G +
Sbjct: 542 GFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQ-IPSDLQVENALIDMYVKCGCLKY 600
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTH 561
A ++ P N V W +++G +H
Sbjct: 601 AQLIFENMP-RRNLVTWNSMIAGYGSH 626
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 243/489 (49%), Gaps = 33/489 (6%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
+T+ + CAS + G+ IH + GL+ + +++ LINMY KCGLL SA VFD
Sbjct: 56 FTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDK 115
Query: 137 SLE-RNSIS----WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
E R+S W ++ Y + G GL F ++ L
Sbjct: 116 MSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQE-------------------LS 156
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-LPDLTAWSALI 250
G QIH + + E D ++ LI +Y+ C + A +F ++ ++ AW+ +I
Sbjct: 157 WYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMI 216
Query: 251 GGYAQLGKACEAIDLF--VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
GG+ + G ++++L+ K + L+ + T ++ + +V + GRQ+H +IKM
Sbjct: 217 GGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDF--GRQVHCDVIKMN 274
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F +V ++L Y+K +E++ K FD++ + +V NA+I+ + + +A+ L
Sbjct: 275 FQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYN 334
Query: 369 DMLFEGHCP-NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M G P + +T S++L+ S + + ++G+ H ++K SNV I SAL+ MY KC
Sbjct: 335 KMK-AGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKC 393
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G DA VF + +++V+W +M+ G+ Q+ ++AL+++ M++ +K + + V+
Sbjct: 394 GSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVI 453
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SA + + VE G H + G+ + S+V +++ G A E + SS N
Sbjct: 454 SAGLGLENVELG-HLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESA-EMVFSSMPNKN 511
Query: 548 KVVWRCLLS 556
V W ++S
Sbjct: 512 LVAWNSMIS 520
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 197/423 (46%), Gaps = 28/423 (6%)
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
S + + Q G++ L++ + S + ++F+ S+L CA L NL G IH+ +
Sbjct: 25 SKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTM 84
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-----QLPDLTAWSALIGGYAQLGKACE 261
L+ D ++A LIN+Y KC L A +VF + PD+T W+ +I GY + G E
Sbjct: 85 GLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEE 144
Query: 262 AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
+ F +M ++ + GRQ+H II+ F ++ ++
Sbjct: 145 GLAQFCRM-------------------QELSWYMAGRQIHGYIIRNMFEGDPYLETALIG 185
Query: 322 FYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
YS C E+ F +++ ++V+WN +I G + + + +++EL E
Sbjct: 186 MYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSA 245
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
+++ S +++G+Q HC ++K F + + ++L+ MYAK G + DA+KVFD +
Sbjct: 246 SFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQV 305
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
K + N M+ + +G +AL +Y+ M+ + + T +LS C +G + G
Sbjct: 306 LDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGR 365
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG-CK 559
+I+ S A + + C G T A + + + E + V W +++G C+
Sbjct: 366 TVHAEVIKRSMQSNVAIQSALLTMYYKC-GSTEDA-DSVFYTMKERDVVAWGSMIAGFCQ 423
Query: 560 THK 562
+
Sbjct: 424 NRR 426
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 139/278 (50%), Gaps = 32/278 (11%)
Query: 232 SRVFSNIQLPDLT-AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
SR F +++ +++ + ++ I Q GK +A++L K S L ++ TF +L A
Sbjct: 8 SRKFYSLRQTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCAS 67
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-----DVV 345
+ GR +H+ I+ MG S ++A ++++ Y KC LL +L+ FD+M E D+
Sbjct: 68 LSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDIT 127
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW---GKQTH 402
WN +I G+ H+ E + M + W G+Q H
Sbjct: 128 VWNPVIDGYFKYGHFEEGLAQFCRM----------------------QELSWYMAGRQIH 165
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLG 461
I++ F+ + + +AL+ MY+ C R +A +F L ++ N+V+WN M+ G+ ++G+
Sbjct: 166 GYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMW 225
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
++LE+YS+ + K +F G +AC H +++ G
Sbjct: 226 EKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFG 263
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 205/670 (30%), Positives = 350/670 (52%), Gaps = 97/670 (14%)
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
D +G+ +H ++ + GL L ++ N L+ Y K G L A VFD +++ SW +L+S
Sbjct: 25 DPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLIS 84
Query: 151 SYCQCGE--------------------------HVHGL---KIFLLSR--KSGVAISEFS 179
Y + G + GL I++ ++ V S+F+
Sbjct: 85 GYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFT 144
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE------------- 226
++VL +CA L +G +IHS V K L VA L+N+YAKC
Sbjct: 145 VSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMT 204
Query: 227 ------------------KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+ +LA+ F + D+ +W+++I GY+Q G EA+ +F K
Sbjct: 205 VKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSK 264
Query: 269 MFSS-GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN---------- 317
M + L P T + +L A A++++ G+Q+H+ I++ + V N
Sbjct: 265 MLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSG 324
Query: 318 -----------------------TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
++LD Y+K ++ + + F+++ + DVV+W A+I G+
Sbjct: 325 GVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGY 384
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ + + +A+EL + M+ EG PN YT + +L++SS + +E GKQ H +K G S
Sbjct: 385 VQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTP 444
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ +AL+ MYAK G +N A++VFD + K +VSW +M++ AQHGLG+EA+ ++ M
Sbjct: 445 SVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLS 504
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+KP+ T++GVLSAC H+GLVE+G Y+N M H I P + H A ++ L+ G +
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQ 564
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
AY FI+S PIEP+ + W LL+ CK HK+ L + AAE++L DP ++ A++ L+NVY+
Sbjct: 565 EAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYS 624
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W+ A+ RK+MK++ ++K+ G SW ++N++H F Q +++++M ++
Sbjct: 625 ACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWE 684
Query: 654 HLFDGGYVPD 663
+ G++PD
Sbjct: 685 EIKKMGFIPD 694
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/519 (25%), Positives = 245/519 (47%), Gaps = 76/519 (14%)
Query: 12 TYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
++N L+ Y K +++L EMP+ + +SW+A+I G++Q G+ + A+ F M+
Sbjct: 78 SWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISER 137
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG------ 125
+ P+ +T +S+CA+ G++IH + + GL V+ L+NMY KCG
Sbjct: 138 VPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAK 197
Query: 126 --------------------LLSSAQFVFDASL-----ERNSISWVSLLSSYCQCGEHVH 160
+ S QF AS +R+ +SW S++S Y Q G ++
Sbjct: 198 VVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLE 257
Query: 161 GLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
L IF +L+ S + F+ AS+L ACA L L +G QIH+ + + E V L
Sbjct: 258 ALVIFSKMLNEPS-LKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNAL 316
Query: 219 INLYAKCEKLDL---------------------------------ASRVFSNIQLPDLTA 245
I++YAK +++ A +F+ ++ D+ A
Sbjct: 317 ISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVA 376
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+A+I GY Q G +A++LF M + G P+ T + +L + + G+Q+H+ I
Sbjct: 377 WTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAI 436
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYG--- 361
K G SS V N ++ Y+K + + + FD + + ++VSW ++I +A +G
Sbjct: 437 KAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMI---MALAQHGLGK 493
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSAL 420
EAI L + ML G P+ TY +L+ + + +E G++ + + + + + + +
Sbjct: 494 EAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACM 553
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
+D+Y + G L +A + + + ++W ++L H
Sbjct: 554 IDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIH 592
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 126/276 (45%), Gaps = 63/276 (22%)
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
F+++L +K+ GR +H IIK G ++ N ++ FY+K L + FDEM
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 341 EHDVVSWNALIAGH---------------LASCH----------------YGEAIELLKD 369
SWN LI+G+ + C + AI +
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M+ E P+ +T SN+L+ + ++ G++ H +VK G S V + ++L++MYAKCG
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 430 LNDARKVFDHLSSKN-------------------------------LVSWNTMLVGYAQH 458
A+ VFD ++ KN +VSWN+M+ GY+Q
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 459 GLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHI 493
G EAL I+S M+ E +KP++ T +LSAC ++
Sbjct: 253 GYNLEALVIFSKMLNEPSLKPDNFTLASILSACANL 288
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 106/266 (39%), Gaps = 35/266 (13%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
+++IL S I G+ HC I+K G V + + L+ YAK G L A VFD +
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 442 SKNLVSWNTML-------------------------------VGYAQHGLGREALEIYSM 470
K+ SWNT++ VGY Q GL A+ +++
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M ++ P+ T VLS+C ++ G +S + G+ + S+++++A G
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIG-RKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN 590
A ++ N W L+S L EK+ D + S + M+S
Sbjct: 192 DPVIAKVVFDRMTVK-NISTWNALISLYMQSGQFELAASQFEKM--PDRDIVSWNSMISG 248
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKD 616
+ + K++ E SLK D
Sbjct: 249 YSQQGYNLEALVIFSKMLNEPSLKPD 274
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/584 (32%), Positives = 330/584 (56%), Gaps = 11/584 (1%)
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSHVS--NCLINMYGKCGLLSSAQFVFDASLERNSIS 144
A + + GK IH + + ++ N LIN+Y KC + A+ +FD +RN +S
Sbjct: 36 ADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVS 95
Query: 145 WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI-----SEFSCASVLGACAVLGNLKVGMQI 199
W +L++ Y G + L++F K+ +++ +E+ A+++ +C+ G + G Q
Sbjct: 96 WGALMAGYFHNGLVLEVLRLF----KTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQC 151
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
H K L F ++V LI +Y++ + A V+ + D+ +++ +I G + G
Sbjct: 152 HGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYP 211
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
EA+++ +M ++ VT+ G + +K+ G Q+H + + G +FV++ +
Sbjct: 212 SEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAI 271
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
+D Y KC + + K F+ + +VVSW A++A + + + EA+ +M +G PN
Sbjct: 272 IDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNE 331
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
YT++ +LN + I A+ GK H I K GF+ ++++G+AL++MY+K G + A KVF
Sbjct: 332 YTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLE 391
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ ++ ++W+ M+ G + HGLGREAL ++ M K P+ TF+GVLSAC H+G V+EG
Sbjct: 392 MICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEG 451
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK 559
++Y N +++ GI P ++H +V L G+ A F+KS+P++ + V WR LLS C
Sbjct: 452 FYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACH 511
Query: 560 THKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGC 619
H++ LG+ AE +L DP D +I+LSN+YA+A WD K+RK+M+E+++KK+ G
Sbjct: 512 VHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGA 571
Query: 620 SWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
SW E++N +H F + + ++E + +L + GYVPD
Sbjct: 572 SWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPD 615
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 149/544 (27%), Positives = 269/544 (49%), Gaps = 35/544 (6%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N++ N L+ +Y K +I A+ LFD M +RNV+SW AL++G+ G+ L F+ M+
Sbjct: 61 NIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMI 120
Query: 69 CC-VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
+ PN Y + +S+C+ G G + HG +SGL + +V N LI MY + +
Sbjct: 121 SVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDV 180
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A V+ + S+ +++ + G L++ + + + G C
Sbjct: 181 KGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLC 240
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ L +L++G+Q+H +F+ E+D FV+ +I++Y KC + A +VF+ +Q ++ +W+
Sbjct: 241 SHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWT 300
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A++ Y+Q G EA++ F +M GL+P+E TF+ +L + A + G+ LH+ I K
Sbjct: 301 AILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKS 360
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---EAI 364
GF V N +++ YSK +E + K F EM D ++W+A+I G H+G EA+
Sbjct: 361 GFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICG---LSHHGLGREAL 417
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG--------KQTHCCIVKPGFDSNVVI 416
+ ++ML CP+ T+ +L+ + + +++ G KQT ++PG + I
Sbjct: 418 VVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTG---IEPGVEHYTCI 474
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVG---YAQHGLGREALEIYSMMQ 472
V + K GRL++A K ++V+W T+L + +GLG++ E+ M
Sbjct: 475 ----VGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMD 530
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD----HIASVVHLFAC 528
P D +LS +G ++R+ + I + +H+F
Sbjct: 531 -----PGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVS 585
Query: 529 RGQT 532
G+T
Sbjct: 586 EGKT 589
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 174/362 (48%), Gaps = 36/362 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M +G + + ++ MY K I +A+K+F+ + +NV+SW+A+++ +SQ G E A
Sbjct: 256 MFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEA 315
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
LN+F M L PN YT+ +++CA GK +H R+ +SG E + V N LINM
Sbjct: 316 LNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINM 375
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + +A VF + R+SI+W +++ CG HG L R++ V E
Sbjct: 376 YSKSGSIEAAHKVFLEMICRDSITWSAMI-----CGLSHHG-----LGREALVVFQEMLA 425
Query: 181 AS----------VLGACAVLGNLKVGM-QIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
A VL ACA LG+++ G ++ L+ + +E ++ L K +LD
Sbjct: 426 AKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLD 485
Query: 230 LASRVFSNIQLP-DLTAWSALIGG---YAQLGKACEAIDLFVKMFSSGLMPSEV-TFSYV 284
A + + D+ AW L+ + G + +L ++M P +V T+ +
Sbjct: 486 EAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQM-----DPGDVGTYILL 540
Query: 285 LGAFADVKETIGGRQLHSL-----IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
+A K G ++ L + K +S+ + N++ F S+ + ES + ++++
Sbjct: 541 SNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKV 600
Query: 340 DE 341
E
Sbjct: 601 QE 602
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/656 (30%), Positives = 348/656 (53%), Gaps = 11/656 (1%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM-----VCC 70
L ++Y +++ I+ A KLF E P R V W+AL+ + G L+ FR M V
Sbjct: 177 LNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSI 236
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
P+ Y+ A+ +CA GK IHG + + ++ + V + LI++Y KCG ++ A
Sbjct: 237 EERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDA 296
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF---LLSRKSGVAISEFSCASVLGAC 187
VF + + + W S++S Y Q G L F ++S K V+ + SV AC
Sbjct: 297 VKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEK--VSPDPVTLVSVASAC 354
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A L N K+G +H V + L+ +A L++LY K + AS +F + D+ +WS
Sbjct: 355 AQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWS 414
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
++ YA G + +DLF +M + P+ VT VL A A + G ++H L +
Sbjct: 415 TMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNY 474
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
GF T V+ ++D Y KC E+++ F+ M + DV++W L +G+ + E++ +
Sbjct: 475 GFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVF 534
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
++ML G P+ IL S++ ++ H ++K GF++N IG++L+++YAKC
Sbjct: 535 RNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKC 594
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI-YSMMQENKIKPNDNTFIGV 486
+ DA KVF ++ K++V+W++++ Y HG G EAL++ Y M + KPN+ TFI +
Sbjct: 595 SSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISI 654
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC H GL++EG + F+ M+ + + P +H A +V L G+ A + I + P++
Sbjct: 655 LSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQA 714
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+W LL C+ H+++ +G AA+ + S DP +I+LSN+Y+ W K+R+
Sbjct: 715 GPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRR 774
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
++KEK L K G S EL+N++ F + ++E++ +L + + + P
Sbjct: 775 LVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMREVAFDP 830
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 239/509 (46%), Gaps = 41/509 (8%)
Query: 97 EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
++H + ++GL +S + L +Y + + A +F + R W +LL SYC G
Sbjct: 157 QLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEG 216
Query: 157 EHVHGLKIFL-LSRKSGVAISE----FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
E V L +F ++ S V+I E +S + L +CA L L +G IH + K ++ D
Sbjct: 217 EWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGD 276
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM-F 270
FV LI+LY KC +++ A +VF PD+ W+++I GY Q G A+ F +M
Sbjct: 277 MFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVV 336
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
S + P VT V A A + GR +H + + G + +AN++L Y K ++
Sbjct: 337 SEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIK 396
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
+ F EM + D++SW+ ++A + + + ++L +ML + PN T ++L +
Sbjct: 397 NASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACA 456
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
I +E G + H V GF+ + +AL+DMY KC A +F+ + K++++W
Sbjct: 457 CISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAV 516
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG--WHYF---NS 505
+ GYA +G+ E++ ++ M + +P+ + +L+ +G++++ H F N
Sbjct: 517 LFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNG 576
Query: 506 MIRDHGISPRMDHI-------------------------ASVVHLFACRGQTRRA----Y 536
+ I + + +S++ + GQ A Y
Sbjct: 577 FENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFY 636
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
+ S +PN V + +LS C +H L+
Sbjct: 637 QMANHSDTKPNNVTFISILSAC-SHSGLI 664
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 152/305 (49%), Gaps = 12/305 (3%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL +Y K I +A LF EM ++++ISWS +++ ++ G L+ F M+ ++
Sbjct: 383 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIK 442
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN+ T V + ACA + G +IH G E+ + VS L++MY KC A +
Sbjct: 443 PNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDL 502
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ +++ I+W L S Y G + +F SG + +L + LG L
Sbjct: 503 FNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGIL 562
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+ + +H+ V K E ++F+ LI +YAKC ++ A++VF + D+ WS++I Y
Sbjct: 563 QQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAY 622
Query: 254 AQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
G+ EA+ LF +M + S P+ VTF +L A + HS +IK G + F
Sbjct: 623 GFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACS-----------HSGLIKEGINMF 671
Query: 313 TFVAN 317
+ N
Sbjct: 672 DIMVN 676
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 126/256 (49%), Gaps = 7/256 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF L+ MY+K A LF+ MP+++VI+W+ L SG++ GM ++
Sbjct: 472 VNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESM 531
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
FR M+ P+ V ++ + G + +H + ++G E N + LI +Y
Sbjct: 532 WVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVY 591
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSC 180
KC + A VF ++ ++W S++++Y G+ LK+F ++ S + +
Sbjct: 592 AKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTF 651
Query: 181 ASVLGACAVLGNLKVGMQIHS-LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L AC+ G +K G+ + +V K L+ + +++L + +LD+A V +N+
Sbjct: 652 ISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMP 711
Query: 240 L---PDLTAWSALIGG 252
+ PD+ W AL+G
Sbjct: 712 MQAGPDI--WGALLGA 725
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +GF N L+ +Y K S I DA K+F M ++V++WS++I+ + G E A
Sbjct: 572 VIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEA 631
Query: 61 LNYFRLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY-RSGLELNSHVSNCLI 118
L F M +PN T++ +SAC+ G + G + M + L+ NS ++
Sbjct: 632 LKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMV 691
Query: 119 NMYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHV 159
++ G+ G L A + + ++ W +LL + C+ +++
Sbjct: 692 DLLGRMGELDMALDVINNMPMQAGPDIWGALLGA-CRIHQNI 732
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 207/673 (30%), Positives = 351/673 (52%), Gaps = 11/673 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G+ ++ T L A+ LF +P+ ++ ++ LI GFS
Sbjct: 31 LIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSPDASSI 90
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
Y L+ L P+ +TY A+SA D G +H G + N V++ L+++
Sbjct: 91 SFYTHLLKNTTLSPDNFTYAFAISASP---DDNLGMCLHAHAVVDGFDSNLFVASALVDL 147
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K ++ A+ VFD +R+++ W ++++ + + +++F GV + +
Sbjct: 148 YCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTV 207
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+VL A A + +KVGM I L K FD +V GLI++++KCE +D A +F I+
Sbjct: 208 ATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRK 267
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
PDL +++ALI G++ G+ A+ F ++ SG V+ S ++G V G L
Sbjct: 268 PDLVSYNALISGFSCNGETECAVKYFRELLVSG---QRVSSSTMVG-LIPVSSPFGHLHL 323
Query: 301 HSLI----IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
I +K G V+ + YS+ ++ + + FDE E V +WNA+I+G+
Sbjct: 324 ACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQ 383
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
S AI L ++M+ PN T ++IL+ + + A+ +GK H I + N+ +
Sbjct: 384 SGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYV 443
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+AL+DMYAKCG +++A ++FD S KN V+WNTM+ GY HG G EAL++++ M
Sbjct: 444 STALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGF 503
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
+P+ TF+ VL AC H GLV EG F++M+ + I P +H A +V + GQ +A
Sbjct: 504 QPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKAL 563
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
EFI+ P+EP VW LL C HKD L R A+E++ DP + +++LSN+Y+
Sbjct: 564 EFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVER 623
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
+ + A VR+ +K+++L K GC+ E+ H F + Q ++ + +L+ +
Sbjct: 624 NFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMR 683
Query: 657 DGGYVPDPIYSSH 669
+ GY + + + H
Sbjct: 684 EMGYQSETVTALH 696
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/632 (31%), Positives = 350/632 (55%), Gaps = 5/632 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G+ + N+L+ +Y KF+++ DAQ +FDEM RN I+W+ LI G Q+ E
Sbjct: 108 GYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIA 167
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R M E N +T + AC S + G++IHG + + G + + V LI+MY +C
Sbjct: 168 REMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRC 227
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQ--CGEHVHGLKIFLLSRKSGVAISEFSCAS 182
G L +A+ V+ ++ ++S Y + CGE G+ + LL SG+ ++++ +
Sbjct: 228 GDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLG--SGLEPNDYTFTN 285
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
V+ AC +++V +H + KC + V ++++Y K L+ A + F + +
Sbjct: 286 VISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERN 345
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
L +W+AL+ GY + G +A++ F ++ G+ F+ +L ++ K G Q+H
Sbjct: 346 LVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHG 405
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
++K+G+ V ++D Y+KC L + F + + ++VS+NA+++G++ + +
Sbjct: 406 FVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIGA-DEED 464
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+ L + P+ T++ +L++S+D + GK H I+K GF++N +G+A++
Sbjct: 465 AMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVIT 524
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MYAKCG + DA ++F ++ + +SWN ++ YA HG GR+AL ++ M++ + P++ T
Sbjct: 525 MYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEIT 584
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
+ VL AC + GL+EEG+ FN M +GI P ++H A +V L G A FI S
Sbjct: 585 ILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRS 644
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
P + ++WR L+ CK H DL G+ A++ +L PE+ ++I++SN+YA M +E A
Sbjct: 645 PFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAA 704
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTS 634
+VR +M + + K+ G SW E+ NK+H F S
Sbjct: 705 RVRTVMNDLKVSKEAGSSWIEIDNKVHQFVAS 736
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/507 (30%), Positives = 261/507 (51%), Gaps = 44/507 (8%)
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
GD G+ IH + + G + ++ N L+N+YGK L AQ VFD L RN+I+W +L+
Sbjct: 92 GDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLI 151
Query: 150 SSYCQCGEHVHGLKIFLLSRK---SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+ Q + +F ++R+ G +E +C+ +L AC L NL G QIH V K
Sbjct: 152 KGHLQVNDVE---SVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKR 208
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
+ D FV LI++Y++C L A +V+SN+ D+ + +I Y + G +AI +F
Sbjct: 209 GFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVF 268
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
+ + SGL P++ TF+ V+ A + R LH + IK G V N ++ Y K
Sbjct: 269 LHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKH 328
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
+LEE+ K+F M E ++VSW AL++G++ + + +A+E +L G + ++ +L
Sbjct: 329 GMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLL 388
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+ S+ + G Q H +VK G+ +V +G+AL+D+YAKC +L AR VF L KN+V
Sbjct: 389 DGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIV 448
Query: 447 SWNTMLVGYAQHGLGRE-ALEIYSMMQENKIKPNDNTFIGVLS-----------ACVHIG 494
S+N +L GY G E A+ ++S ++ IKP+ TF +LS C+H
Sbjct: 449 SFNAILSGYI--GADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAY 506
Query: 495 LVEEGWHYFNSMIRDHGIS------------------PRMDHIA--SVVHLFACRGQTRR 534
+++ G+ N + + I+ +D I+ +V+ +A GQ R+
Sbjct: 507 IIKTGFEA-NPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRK 565
Query: 535 A---YEFIKSSPIEPNKVVWRCLLSGC 558
A +E +K P+++ +L C
Sbjct: 566 ALILFEEMKKEEFVPDEITILSVLQAC 592
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 228/465 (49%), Gaps = 11/465 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +V L+ MY + + A+K++ + ++V + +IS + + G E A
Sbjct: 205 VIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKA 264
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F ++ LEPN YT+ +SAC D + +HG + G V N ++++
Sbjct: 265 IGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSV 324
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G+L A+ F ERN +SW +LLS Y + G L+ F + GV
Sbjct: 325 YVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCF 384
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A++L C+ NL +G+QIH V K D V LI+LYAKC KL A VF ++
Sbjct: 385 ATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLD 444
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +++A++ GY + +A+ LF ++ + + P VTF+ +L AD + G+ L
Sbjct: 445 KNIVSFNAILSGYIGADEE-DAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCL 503
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ IIK GF + V N V+ Y+KC + ++ + F M+ D +SWNA+I+ +
Sbjct: 504 HAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQG 563
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV-----KPGFDSNVV 415
+A+ L ++M E P+ T ++L S +E G C+ K G +
Sbjct: 564 RKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEG----FCLFNDMESKYGIKPEIE 619
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+ +VD+ + G L++A + S + + W T++ HG
Sbjct: 620 HFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHG 664
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P + +L IS + G+ H + K G+ ++ G+ LV++Y K +L DA+ V
Sbjct: 76 PLFNDWPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSV 135
Query: 437 FDHLSSKNLVSWNTMLVGYAQ----HGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
FD + +N ++W T++ G+ Q + R A E+Y + +E N++T +L AC
Sbjct: 136 FDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEF----NEHTCSVILQAC 189
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 193/666 (28%), Positives = 360/666 (54%), Gaps = 6/666 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG ++ L+ Y I A+ FD++ ++V +W+++IS +++IG A
Sbjct: 66 LVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAA 125
Query: 61 LNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
++ F + L+ ++YT+ + AC G+ G+++H + + G E + +++ I+
Sbjct: 126 VDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDVYIAASFIH 182
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y + G +S A +FD + R+ +W +++S + G+ L++F R V++ +
Sbjct: 183 FYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVT 242
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+S+L C L ++ G+ IH K LEFD FV LIN+YAK +L A +F+ ++
Sbjct: 243 ISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMK 302
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ D+ +W++L+ + Q K A+ ++ KM S G++P +T + A++ + R
Sbjct: 303 VRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRS 362
Query: 300 LHSLIIKM-GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H + + F + N ++D Y+K ++ + K F+ + DV+SWN+LI G+ +
Sbjct: 363 IHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNG 422
Query: 359 HYGEAIELLKDM-LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EAI++ M + G PN T+ +IL S + A++ G + H ++K ++ +
Sbjct: 423 LANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVS 482
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ LVDMY KCG+L DA +F + ++ VSWN ++ + HG G +A++++ MQ +K
Sbjct: 483 TCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVK 542
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ TF+ +LSAC H GLV+EG F M +GI P + H +V LF G +A+
Sbjct: 543 PDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFN 602
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
F+K+ P+ P+ VW LL C+ H+++ L R ++ +L + E+ +++LSN+YA+
Sbjct: 603 FVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGH 662
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
W+ +VR + +++ LKK G S E+ K+ F T + +++ + L+ +
Sbjct: 663 WEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKS 722
Query: 658 GGYVPD 663
GYVPD
Sbjct: 723 IGYVPD 728
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 224/419 (53%), Gaps = 8/419 (1%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
K++H + SG + +S LIN Y G + A+ FD ++ +W S++S+Y +
Sbjct: 59 AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYAR 118
Query: 155 CGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
G + F LS S + ++ V+ AC GNL G ++H LV K E D
Sbjct: 119 IGHFHAAVDCFNEFLS-TSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDV 174
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
++A I+ Y++ + LA +F N+ + D+ W+A+I G+ GK EA+++F +M
Sbjct: 175 YIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFK 234
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
+ VT S +L + + I G +H IK+G FV N +++ Y+K L +
Sbjct: 235 SVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSA 294
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
F++M D+VSWN+L+A + A+ + M G P+L T ++ ++++++
Sbjct: 295 ETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAEL 354
Query: 393 PAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ H + + F ++ +G+A++DMYAK G ++ ARKVF+ L K+++SWN++
Sbjct: 355 GNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSL 414
Query: 452 LVGYAQHGLGREALEIYSMMQ-ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
+ GY+Q+GL EA+++YS M+ + PN T++ +L+A +G +++G +I++
Sbjct: 415 ITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKN 473
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 185/368 (50%), Gaps = 19/368 (5%)
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+H+L+ F++ LIN YA + A F IQ D+ W+++I YA++G
Sbjct: 61 QLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIG 120
Query: 258 KACEAIDLFVKMFSSGLMPSE-VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
A+D F + S+ + S+ TF V+ A ++ + GR++H L++K+GF ++A
Sbjct: 121 HFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFECDVYIA 177
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
+ + FYS+ + + FD M D+ +WNA+I+G + EA+E+ +M F+
Sbjct: 178 ASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVS 237
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
+ T S++L I + I G H +K G + ++ + +AL++MYAK G L A +
Sbjct: 238 MDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETI 297
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
F+ + +++VSWN++L + Q+ AL +Y+ M + P+ T + + S +G
Sbjct: 298 FNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELG-- 355
Query: 497 EEGWHYFNSMIRDHGISPR----MDHIA---SVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
F S HG R + IA +++ ++A G A + + P++ + +
Sbjct: 356 -----NFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVK-DVI 409
Query: 550 VWRCLLSG 557
W L++G
Sbjct: 410 SWNSLITG 417
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 149/301 (49%), Gaps = 9/301 (2%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
+QLH+L++ G + F++ +++ Y+ + + TFD++ DV +WN++I+ +
Sbjct: 59 AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYAR 118
Query: 357 SCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
H+ A++ + L + YT+ ++ ++ G++ HC ++K GF+ +V
Sbjct: 119 IGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFECDVY 175
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
I ++ + Y++ G ++ A +FD++ +++ +WN M+ G+ +G EALE++ M+
Sbjct: 176 IAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKS 235
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+ + T +L CV + + G I+ G+ + ++++++A G+ R A
Sbjct: 236 VSMDSVTISSLLPICVQLDDIISGVLIHVYAIK-LGLEFDLFVCNALINMYAKFGELRSA 294
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLV--LGRYAAEKILSTDPEDTSAHIMLSNVYA 593
+ + V W LL+ + +K V LG Y + P D + L++V A
Sbjct: 295 ETIFNQMKVR-DIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVP-DLLTLVSLASVAA 352
Query: 594 E 594
E
Sbjct: 353 E 353
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
+ KQ H +V G ++ + + L++ YA G + AR FD + +K++ +WN+M+
Sbjct: 56 VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115
Query: 455 YAQHGLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
YA+ G A++ ++ + + ++ + TF V+ AC G +++G + ++ G
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDG-RKVHCLVLKLGFE 171
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ AS +H ++ G A + I + W ++SG
Sbjct: 172 CDVYIAASFIHFYSRFGFVSLACNLFDNMMIR-DIGTWNAMISG 214
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 205/639 (32%), Positives = 331/639 (51%), Gaps = 67/639 (10%)
Query: 92 ARSGKEIHGRMYRSGLELNSHVS-NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
+++G +H R + L + S N +++ Y K G + S+ FD +R+S+SW +++
Sbjct: 60 SKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIV 119
Query: 151 SYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF 210
Y G++ ++I + G+ S+F+ +VL + A L+ G ++HS + K L
Sbjct: 120 GYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRG 179
Query: 211 DKFVAMGLINLYAKCE-------------------------------KLDLASRVFSNIQ 239
+ V+ L+N+YAKC ++DLA F +
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ W+++I GY Q G A+D+F KM S L P T + VL A A++++ G
Sbjct: 240 ERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGE 299
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKC-------ELLE--------------------- 330
Q+HS I+ GF V N ++ YS+C L+E
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK 359
Query: 331 -----ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
E+ FD + + DVV+W A+I G+ YGEAI L + M+ E PN YT + +
Sbjct: 360 LGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAM 419
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKN 444
L+++S + ++ GKQ H VK G +V + +AL+ MYAK G + A + FD + ++
Sbjct: 420 LSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERD 479
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
VSW +M++ AQHG EALE++ M ++P+ T++GV SAC H GLV +G YF+
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD 539
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
M I P + H A +V LF G + A EFI+ PIEP+ V W LLS C+ +K++
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNI 599
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
LG+ AAE++L +PE++ A+ L+N+Y+ W+E AK+RK MK+ +KK+ G SW E+
Sbjct: 600 DLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEV 659
Query: 625 QNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++K+H F Q +++ M ++ + GYVPD
Sbjct: 660 KHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPD 698
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 159/367 (43%), Gaps = 60/367 (16%)
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL---- 355
+H +IK G ++ N +++ YSK + K FDEM SWN +++ +
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95
Query: 356 --ASC-------------------------HYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+SC Y +AI ++ +M+ EG P+ +T +N+L
Sbjct: 96 MDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLAS 155
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ +E GK+ H IVK G NV + ++L++MYAKCG A+ VFD + K++ SW
Sbjct: 156 VAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSW 215
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
N M+ + Q G A+ + M E I T+ ++S G F+ M+R
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIV----TWNSMISGYNQRGYDLRALDMFSKMLR 271
Query: 509 DHGISPRMDHIASVVHLFA-----CRGQTRRAYEFIKSSPIEPNKVVWRCLLS------G 557
D +SP +ASV+ A C G+ + + I ++ + + +V L+S G
Sbjct: 272 DSMLSPDRFTLASVLSACANLEKLCIGE--QIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
+T + L+ R + + +I L ++ N++D SLK
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFD------------SLKDRD 377
Query: 618 GCSWTEL 624
+WT +
Sbjct: 378 VVAWTAM 384
>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
Length = 899
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 213/683 (31%), Positives = 361/683 (52%), Gaps = 23/683 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G V+ N ++ +Y K R+++A+ +F+ +PERN++SW+ALI+ +Q G + A+
Sbjct: 154 VLAGMETQVVG-NAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAM 212
Query: 62 NYFRLM-VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F LM + + PN T+V V AC++ D GK H R+ R+G + V N L+NM
Sbjct: 213 QVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNM 272
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG + A+ VF+ RN +SW ++ +Y Q G F L ++ + +
Sbjct: 273 YGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQG---FIRAAFDLYKRMDCEPNAVTF 329
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+V+ +C +L QIH+ + + D + + L+ +Y KC +D A +F N++
Sbjct: 330 MAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKE 389
Query: 241 PDLTA--WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
A W+A+I G AQ G++ +A++ F KM G+ P+ VT+ L A + + + GR
Sbjct: 390 RSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGR 449
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
QLH+ I+ +N V++ Y KC L+E++ F +M E DVVSWN +IA +
Sbjct: 450 QLHARILLENIHEANL-SNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHG 508
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSNVVI 416
+A+E K M EG + TY ++ +P++ GK H + P + + +
Sbjct: 509 SGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGV 568
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ALV MYA+CG L+DA+ VF S+NLV+W+ ++ AQHG EAL+++ MQ
Sbjct: 569 ATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGT 628
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+ TF +++AC G+V++G YF SM+ D+ I DH +V L G A
Sbjct: 629 KPDALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEEAE 688
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH----IMLSNVY 592
+ ++ +P V LL C H D+ G A+ L D +++++ ML+ +Y
Sbjct: 689 QVMRKNPCALAHAV---LLGACHVHGDVERGIRIAQSALELDWKNSASFAASMAMLAELY 745
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGC-SWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
A W++ A+VRK ++ ++ +++ G SW E++N++H F + QG L ++ +L
Sbjct: 746 GAAGRWEDAARVRKAVESRNARREPGGRSWIEVKNRVHEFGEDD-DRLQGPRLDKIRGEL 804
Query: 652 ----SVHLFDGGYVPDPIYSSHF 670
S+ + +GG D +H
Sbjct: 805 QRLSSLAVEEGGICKDENARAHI 827
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 172/594 (28%), Positives = 298/594 (50%), Gaps = 28/594 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+++SG N NHL+ MY K + DA ++F+ +P NV SW+ALI+ +++ G
Sbjct: 52 ILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREV 111
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M +P+ + + ++AC+S G GK IH +G+E V N ++N+
Sbjct: 112 LGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCAVLAGMETQV-VGNAIVNL 170
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFS 179
YGKCG + A+ VF+ ERN +SW +L+++ Q G +++F L+ V ++ +
Sbjct: 171 YGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDAT 230
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV+ AC+ L +L G H + + + FV L+N+Y KC +D A VF +
Sbjct: 231 FVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMS 290
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+ +I YAQ G A DL+ +M P+ VTF V+ + ++ Q
Sbjct: 291 SRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQ 347
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE--HDVVSWNALIAGHLAS 357
+H+ ++ GF S + ++ Y KC ++ + F+ + E ++ V+WNA+I+G
Sbjct: 348 IHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQH 407
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF-DSNVVI 416
+A+E M EG PN TY L S + + G+Q H I+ ++N +
Sbjct: 408 GESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLENIHEAN--L 465
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+A+++MY KCG L++A F + +++VSWNTM+ YAQHG GR+ALE + M
Sbjct: 466 SNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGW 525
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMI--------RDHGISPRMDHIASVVHLFAC 528
+ T++G + AC + + G +S++ +D G++ ++V ++A
Sbjct: 526 TTDRATYLGAIDACGSVPSLALG-KTIHSIVATAAPCLEQDPGVA------TALVTMYAR 578
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH--KDLVLGRYAAEKILSTDPE 580
G A S N V W L++ C H ++ L + ++ T P+
Sbjct: 579 CGSLHDAKSVFWRSH-SRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPD 631
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/564 (29%), Positives = 269/564 (47%), Gaps = 50/564 (8%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L+P Y + + C + A +GK +H + SG +N ++ N LI MY KCG L A
Sbjct: 24 LQPARYASL--LQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDAL 81
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VF+ N SW +L+++Y + G L +F + G F ++VL AC+ G
Sbjct: 82 EVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAG 141
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
L G IH +E + V ++NLY KC ++ A VF + +L +W+ALI
Sbjct: 142 ALNEGKAIHDCAVLAGME-TQVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIA 200
Query: 252 GYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
AQ G +A+ +F M G + P++ TF V+ A +++ + G+ H II+ GF
Sbjct: 201 ANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFD 260
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S+ FV N++++ Y KC ++ + F++M +VVSW +I + A +L K M
Sbjct: 261 SYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM 320
Query: 371 LFEGHCPNLYTYSNILNI---SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
E PN T+ +++ D+P E Q H +V GFDS+ V+ LV MY KC
Sbjct: 321 DCE---PNAVTFMAVMDSCLRPEDLPRAE---QIHAHMVASGFDSDAVLQVCLVTMYGKC 374
Query: 428 GRLNDARKVFDHLS--SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
G ++ A +F++L S N V+WN M+ G AQHG ++ALE + M+ ++PN T++
Sbjct: 375 GSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLA 434
Query: 486 VLSAC-----------VHIGLVEEGWH---YFNSMIRDHG----ISPRMDHIA------- 520
L AC +H ++ E H N++I +G + MD A
Sbjct: 435 SLEACSSLNDLTRGRQLHARILLENIHEANLSNAVINMYGKCGSLDEAMDEFAKMPERDV 494
Query: 521 ----SVVHLFACRGQTRRAYEFIKSSPIE---PNKVVWRCLLSGCKTHKDLVLGRYAAEK 573
+++ +A G R+A EF K +E ++ + + C + L LG+
Sbjct: 495 VSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSI 554
Query: 574 ILSTDP---EDTSAHIMLSNVYAE 594
+ + P +D L +YA
Sbjct: 555 VATAAPCLEQDPGVATALVTMYAR 578
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 228/484 (47%), Gaps = 46/484 (9%)
Query: 169 RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
+KS ++ AS+L C + G +H + ++++ LI +YAKC L
Sbjct: 18 KKSSESLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCL 77
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
+ A VF + P++ +W+ALI YA+ G E + LF KM G P FS VL A
Sbjct: 78 EDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTAC 137
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ G+ +H + G + V N +++ Y KC + E+ F+ + E ++VSWN
Sbjct: 138 SSAGALNEGKAIHDCAVLAGMET-QVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWN 196
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
ALIA + + H +A+++ M +G PN T+ ++++ S++ + GK TH I++
Sbjct: 197 ALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIR 256
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
GFDS + +G++LV+MY KCG ++ AR VF+ +SS+N+VSW M+ YAQ G R A ++
Sbjct: 257 TGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDL 316
Query: 468 YSMMQENKIKPNDNTFIGVLSACVH----------------------------------- 492
Y M +PN TF+ V+ +C+
Sbjct: 317 YKRMD---CEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGK 373
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF---IKSSPIEPNKV 549
G V+ W F ++ + + +++ A G++++A E ++ + PN V
Sbjct: 374 CGSVDSAWSIFENLKERSNNAVTWN---AMISGLAQHGESKQALECFWKMELEGVRPNSV 430
Query: 550 VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK 609
+ L C + DL GR +IL + + + + N+Y + DE M
Sbjct: 431 TYLASLEACSSLNDLTRGRQLHARILLENIHEANLSNAVINMYGKCGSLDEAMDEFAKMP 490
Query: 610 EKSL 613
E+ +
Sbjct: 491 ERDV 494
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 192/403 (47%), Gaps = 38/403 (9%)
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
+K S L P+ ++ +L + K G+ +H I+ G ++ N ++ Y+KC
Sbjct: 17 LKKSSESLQPAR--YASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKC 74
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
LE++L+ F+ + +V SW ALI + H E + L + M +G P+ + +S +L
Sbjct: 75 GCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVL 134
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
S A+ GK H C V G ++ VV G+A+V++Y KCGR+++A+ VF+ L +NLV
Sbjct: 135 TACSSAGALNEGKAIHDCAVLAGMETQVV-GNAIVNLYGKCGRVHEAKAVFERLPERNLV 193
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQ-ENKIKPNDNTFIGVLSAC-----------VHIG 494
SWN ++ AQ+G ++A++++ +M + ++PND TF+ V+ AC H
Sbjct: 194 SWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHER 253
Query: 495 LVEEGWHYF----NSMIRDHGISPRMDHIASV---------------VHLFACRGQTRRA 535
++ G+ + NS++ +G +D V + +A +G R A
Sbjct: 254 IIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAA 313
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLG-RYAAEKILSTDPEDTSAHIMLSNVYAE 594
++ K EPN V + ++ C +DL + A + S D + L +Y +
Sbjct: 314 FDLYKRMDCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGK 373
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFA 637
D + + +KE+S + +W + + + S+ A
Sbjct: 374 CGSVDSAWSIFENLKERS---NNAVTWNAMISGLAQHGESKQA 413
>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 218/634 (34%), Positives = 343/634 (54%), Gaps = 7/634 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF + + LL +Y + ++ A+K+F EMP R+++SWS++IS + G
Sbjct: 125 IIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEG 184
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR MV P+ + V AC G R K HG + + G+E + V + LI M
Sbjct: 185 LDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFM 244
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L SA+ VF+ R++ +W +++SSY G L +F+ +K+ V + +
Sbjct: 245 YAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTM 304
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFD-KFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+L +C L L+ G +H +V K L+ + + L+ LYA K DL ++ I
Sbjct: 305 RIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIG 364
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ W+ LI YAQ G E +DLFV+M G MP + + L A + E G Q
Sbjct: 365 GRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQ 424
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +IK F +V N++++ YSKC ++ + FD+M+ VV+WN++I+G + +
Sbjct: 425 IHGHVIKRPFMD-EYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGY 483
Query: 360 YGEAIELLKDMLFEGHCPNL--YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+AI L M CP + + +++ S + +E GK H ++ G + I
Sbjct: 484 STKAISLFDLMYVT--CPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIE 541
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ALVDMYAKCG L A++VFD++S +++VSW++++ Y HG E + ++S M E+ IK
Sbjct: 542 TALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIK 601
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
PND T + VLSAC H G V+EG +FNSM RD GI P+ +H +V L + G AYE
Sbjct: 602 PNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDFGIEPKREHFVCIVDLLSRAGDLDEAYE 660
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
IK P P +W LL+GC+ H+ + + + ++ + +DT + +LSN+YA
Sbjct: 661 IIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGE 720
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
W+E +VR +MK LKK S EL K + F
Sbjct: 721 WNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRF 754
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 155/592 (26%), Positives = 286/592 (48%), Gaps = 6/592 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + H + + L+ Y + + + +F + W L+ G + A
Sbjct: 24 IIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGCYQEA 83
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ + M+ ++ N YT+ + AC+ GD G+ +HGR+ +SG +++ V+ L+++
Sbjct: 84 ISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSV 143
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YG+ G L SA+ VF R+ +SW S++SS + GE GL F G
Sbjct: 144 YGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLV 203
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+V+ AC LG L++ H + K +E D+FV LI +YAKC L A VF N+
Sbjct: 204 LTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTY 263
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ W+A+I Y G EA+ LFV M + + P+ VT +L + ++ G+ +
Sbjct: 264 RSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSV 323
Query: 301 HSLIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H ++IK ++ + T+L+ Y+ + K E+ + WN LI+ +
Sbjct: 324 HCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGL 383
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
E ++L M +G P+ ++ ++ L+ S + ++ G Q H ++K F V S
Sbjct: 384 LKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYVFNS- 442
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L++MY+KCG ++ A +FD + K +V+WN+M+ G +Q+G +A+ ++ +M +
Sbjct: 443 LINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIG 502
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ F+ V+ AC H+G +E+G + +I G+ + ++V ++A G + A
Sbjct: 503 EVAFVSVIQACSHLGFLEKGKWIHHKLI-TCGVRKCIFIETALVDMYAKCGDLQTAQRVF 561
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILST--DPEDTSAHIMLS 589
+ E + V W L+S H + + K+L + P D + +LS
Sbjct: 562 DNMS-ERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLS 612
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 220/469 (46%), Gaps = 10/469 (2%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
R+ ++H + + L + S LI Y + G L S+ VF +S W LL S+
Sbjct: 15 RTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSH 74
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
G + + ++ + + ++ SVL AC+ G+L VG ++H + K + D
Sbjct: 75 VWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDP 134
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
V L+++Y + LD A +VF + L DL +WS++I + G+ E +D F M S
Sbjct: 135 VVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSE 194
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G P V V+ A ++ + H I+K G + FV ++++ Y+KC L +
Sbjct: 195 GGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSA 254
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
F+ + +W A+I+ + + EA+ L M PN T IL +++
Sbjct: 255 EIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNL 314
Query: 393 PAIEWGKQTHCCIVKPGFDSNV-VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ GK HC ++K D+N+ +G L+++YA + + K+ + + + WNT+
Sbjct: 315 SLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTL 374
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
+ YAQ GL +E ++++ MQ+ P+ + LSA + G ++ G +I+
Sbjct: 375 ISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIK--- 431
Query: 512 ISPRMDHIA--SVVHLFACRGQTRRAYEFIKSSPIEPNKVV-WRCLLSG 557
P MD S++++++ G AY +EP VV W ++SG
Sbjct: 432 -RPFMDEYVFNSLINMYSKCGYVDLAYMIFDQ--MEPKGVVTWNSMISG 477
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 155/308 (50%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
L+ Q+H+ + AL D + LI Y++ L ++ VF PD W L+
Sbjct: 13 TLRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLK 72
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
+ G EAI L+ +M S + + TF VL A + + G+++H IIK GF
Sbjct: 73 SHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDM 132
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V +L Y + L+ + K F EM D+VSW+++I+ + + E ++ + M+
Sbjct: 133 DPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMV 192
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
EG P+ ++ ++ + K H I+K G +++ + S+L+ MYAKCG L
Sbjct: 193 SEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLR 252
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
A VF++++ ++ +W M+ Y G +EAL ++ MQ+ +++PN T +L +C
Sbjct: 253 SAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCT 312
Query: 492 HIGLVEEG 499
++ L+ EG
Sbjct: 313 NLSLLREG 320
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 214/695 (30%), Positives = 356/695 (51%), Gaps = 44/695 (6%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
PNVIT+N ++ Y K ++DA++LFD MP R+V SW+ L+S S+ P + +
Sbjct: 85 PNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSR---PAGSWMSCGAL 141
Query: 68 VCCVLEPNY------YTYVGAVSACASRGD--ARSGK-EIHGRMYRSGLELNSHVSNCLI 118
C L P + + G + D R G + R++ N ++
Sbjct: 142 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 201
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
Y K + A F+ ER+ +SW ++++ Q G L + + + GV +
Sbjct: 202 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 261
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S L ACA L +L G Q+H+ V + + D +VA LI LYAKC A RVF+++
Sbjct: 262 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 321
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
Q + +W+ LIGG Q ++++LF +M + + + + ++ + + GR
Sbjct: 322 QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR 381
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW----------- 347
QLHSL +K G + V+N+++ Y+KC L+ + F M E D+VSW
Sbjct: 382 QLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIG 441
Query: 348 --------------------NALIAGHLASCHYGEAIELLKDMLFEGH-CPNLYTYSNIL 386
NA++ ++ + +++ ML + P+ TY +
Sbjct: 442 NIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLF 501
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+DI A + G Q VK G NV + +A + MY+KCGR+++A+K+FD L+ K++V
Sbjct: 502 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVV 561
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
SWN M+ GY+QHG+G++A + + M KP+ +++ VLS C H GLV+EG YF+ M
Sbjct: 562 SWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMM 621
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVL 566
R HGISP ++H + +V L G A + I P++P VW LLS CK H + L
Sbjct: 622 TRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDEL 681
Query: 567 GRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
AA+ + D D+ ++++L+ +Y++A D++A+VRK+M++K +KK+ G SW E++N
Sbjct: 682 AELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVEN 741
Query: 627 KMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
K+H F + Q I + M++L + GYV
Sbjct: 742 KVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYV 776
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 231/485 (47%), Gaps = 44/485 (9%)
Query: 70 CVLEPNYYT--YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
C L P+ T A+ +C SRG + +HGR+ GL + N L++ Y CG L
Sbjct: 12 CRLLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGAL 71
Query: 128 SSAQFVFDASL-ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA-----ISEFS-C 180
S A+ + A + E N I+ +++ Y + G ++F + VA +S+ S
Sbjct: 72 SDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRP 131
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +C LG ++ Q+ L +K D V L++++ +C +D ASR+FS I+
Sbjct: 132 AGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIER 191
Query: 241 P-------------------------------DLTAWSALIGGYAQLGKACEAIDLFVKM 269
P D+ +W+ +I +Q G+ EA+ L V+M
Sbjct: 192 PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 251
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
G+ T++ L A A + G+QLH+ +I+ +VA+ +++ Y+KC
Sbjct: 252 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 311
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
+E+ + F+ + + + VSW LI G L + +++EL M E + + + +++
Sbjct: 312 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
+ + G+Q H +K G + +V+ ++L+ +YAKCG L +A VF +S +++VSW
Sbjct: 372 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 431
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
+M+ Y+Q G +A E + M N T+ +L A + G E+G +++M+
Sbjct: 432 SMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 487
Query: 510 HGISP 514
++P
Sbjct: 488 KDVTP 492
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 38/285 (13%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG + ++ N L+ +Y K + +A+ +F M ER+++SW+++I+ +SQIG A
Sbjct: 388 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAR 447
Query: 62 NYFRLMVC--------------------------------CVLEPNYYTYVGAVSACASR 89
+F M + P++ TYV CA
Sbjct: 448 EFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADI 507
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
G + G +I G ++GL LN V+N I MY KCG +S AQ +FD ++ +SW +++
Sbjct: 508 GANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMI 567
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG---MQIHSLVFKC 206
+ Y Q G K F G S +VL C+ G ++ G + + V
Sbjct: 568 TGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGI 627
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALI 250
+ + F M ++L + L A + + + P W AL+
Sbjct: 628 SPGLEHFSCM--VDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 670
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 10/156 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G NV N + MY K RI++AQKLFD + ++V+SW+A+I+G+SQ GM + A
Sbjct: 521 VKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAA 580
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-----SGLELNSHVSNC 116
F M+ +P+Y +YV +S C+ G + GK M R GLE H S C
Sbjct: 581 KTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLE---HFS-C 636
Query: 117 LINMYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
++++ G+ G L+ A+ + D ++ + W +LLS+
Sbjct: 637 MVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 672
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 137/332 (41%), Gaps = 58/332 (17%)
Query: 274 LMPSEVT--FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
L+P VT + L + G R LH ++ +G +S F+ NT+L Y C L +
Sbjct: 14 LLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSD 73
Query: 332 SLKTFD-EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS-NILNIS 389
+ + ++ E +V++ N ++ G+ +A EL M P S N L
Sbjct: 74 ARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRM------PRRDVASWNTLMSD 127
Query: 390 SDIPAIEW-----------GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF- 437
+ PA W Q K F + + +ALVDM+ +CG ++ A ++F
Sbjct: 128 TSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFS 187
Query: 438 -----------------------DH-------LSSKNLVSWNTMLVGYAQHGLGREALEI 467
DH ++ +++VSWN M+ +Q G REAL +
Sbjct: 188 QIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGL 247
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD-HIAS-VVHL 525
M ++ + T+ L+AC + + G +IR P++D ++AS ++ L
Sbjct: 248 VVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS---LPQIDPYVASALIEL 304
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+A G + A S + N V W L+ G
Sbjct: 305 YAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIGG 335
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/666 (30%), Positives = 343/666 (51%), Gaps = 5/666 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG + N L+ M ++ A +FD+M ER+ ISW+++ + ++Q G E +
Sbjct: 186 VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 245
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F LM E N T +S + G+ IHG + + G + V N L+ M
Sbjct: 246 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRM 305
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G A VF ++ ISW SL++S+ G + L + SG +++ +
Sbjct: 306 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 365
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S L AC + G +H LV L +++ + L+++Y K ++ + RV +
Sbjct: 366 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 425
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF---ADVKETIGG 297
D+ AW+ALIGGYA+ +A+ F M G+ + +T VL A D+ E G
Sbjct: 426 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER--G 483
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+ LH+ I+ GF S V N+++ Y+KC L S F+ +D ++++WNA++A +
Sbjct: 484 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 543
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
H E ++L+ M G + +++S L+ ++ + +E G+Q H VK GF+ + I
Sbjct: 544 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIF 603
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+A DMY+KCG + + K+ +++L SWN ++ +HG E + M E IK
Sbjct: 604 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 663
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P TF+ +L+AC H GLV++G Y++ + RD G+ P ++H V+ L G+ A
Sbjct: 664 PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAET 723
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FI P++PN +VWR LL+ CK H +L GR AAE + +PED S +++ SN++A
Sbjct: 724 FISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGR 783
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
W++ VRK M K++KK CSW +L++K+ F Q ++++ + + + +
Sbjct: 784 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 843
Query: 658 GGYVPD 663
GYV D
Sbjct: 844 SGYVAD 849
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 252/483 (52%), Gaps = 2/483 (0%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY KF R+ A+ LFD MP RN +SW+ ++SG ++G+ + +FR M ++P+ +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 79 YVGAVSACASRGDA-RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
V+AC G R G ++HG + +SGL + +VS ++++YG GL+S ++ VF+
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+RN +SW SL+ Y GE + I+ R GV +E S + V+ +C +L + +G
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
QI V K LE V LI++ +D A+ +F + D +W+++ YAQ G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
E+ +F M + T S +L V GR +H L++KMGF S V N
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
T+L Y+ E+ F +M D++SWN+L+A + +A+ LL M+ G
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
N T+++ L E G+ H +V G N +IG+ALV MY K G ++++R+V
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG-LV 496
+ +++V+WN ++ GYA+ +AL + M+ + N T + VLSAC+ G L+
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480
Query: 497 EEG 499
E G
Sbjct: 481 ERG 483
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/499 (31%), Positives = 264/499 (52%), Gaps = 5/499 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG +V +L +Y + ++ ++K+F+EMP+RNV+SW++L+ G+S G PE ++
Sbjct: 88 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDI 147
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
++ M + N + +S+C D G++I G++ +SGLE V N LI+M G
Sbjct: 148 YKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGS 207
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
G + A ++FD ER++ISW S+ ++Y Q G +IF L R+ ++ + +++
Sbjct: 208 MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTL 267
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L + + K G IH LV K + V L+ +YA + A+ VF + DL
Sbjct: 268 LSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 327
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W++L+ + G++ +A+ L M SSG + VTF+ L A GR LH L
Sbjct: 328 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL 387
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
++ G + N ++ Y K + ES + +M DVV+WNALI G+ +A
Sbjct: 388 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 447
Query: 364 IELLKDMLFEGHCPNLYTYSNILN---ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ + M EG N T ++L+ + D+ +E GK H IV GF+S+ + ++L
Sbjct: 448 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSL 505
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MYAKCG L+ ++ +F+ L ++N+++WN ML A HG G E L++ S M+ + +
Sbjct: 506 ITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQ 565
Query: 481 NTFIGVLSACVHIGLVEEG 499
+F LSA + ++EEG
Sbjct: 566 FSFSEGLSAAAKLAVLEEG 584
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 162/337 (48%), Gaps = 3/337 (0%)
Query: 221 LYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVT 280
+Y K ++ A +F + + + +W+ ++ G ++G E ++ F KM G+ PS
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 281 FSYVLGAFADVKETIG-GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
+ ++ A G Q+H + K G S +V+ +L Y L+ S K F+EM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
+ +VVSW +L+ G+ E I++ K M EG N + S +++ + G+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
Q +VK G +S + + ++L+ M G ++ A +FD +S ++ +SWN++ YAQ+G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
E+ I+S+M+ + N T +LS H+ + G + ++ G +
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG-RGIHGLVVKMGFDSVVCVC 299
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+++ ++A G++ A K P + + + W L++
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMA 335
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 198/662 (29%), Positives = 360/662 (54%), Gaps = 5/662 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEV 59
++T G +V+ L+ +Y A+ +F+ + R +V W++L+SG+S+ M
Sbjct: 29 ILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIRSDVYIWNSLVSGYSKNSMFHD 88
Query: 60 ALNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
L F RL+ C + P+ +TY + A + G G+ IH + +SG + V++ L+
Sbjct: 89 TLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMIHTVVVKSGHVCDVVVASSLV 148
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY K L + VFD ER+ SW +++SS+ Q G+ L++F +S +
Sbjct: 149 GMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSV 208
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S + AC+ L L+ G +IH K E D++V L+++Y +C+ L++A VF +
Sbjct: 209 SITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQM 268
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ L AW+++I GY G + ++L +M G PS+ T + +L A + + + G+
Sbjct: 269 RRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK 328
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H +I+ + ++ +++D Y KC ++ + F + + V SWN +I+G+++
Sbjct: 329 FVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVG 388
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
++ +A+++ M+ G P++ T++++L+ S + A+E GKQ H I + +++ ++ S
Sbjct: 389 NWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLS 448
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMY+KCG + +A ++F+ + K++VSW M+ Y HG REAL + MQ+ +KP
Sbjct: 449 ALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKP 508
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ VLSAC H GL++EG YF+ M +GI ++ + ++ + G+ AY
Sbjct: 509 DGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGI 568
Query: 539 IKSSP-IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
++ P N + L C H+D +LG A+ ++ P+D S + +L N+YA
Sbjct: 569 LQQKPETRDNAELLSTLFCACCLHRDHLLGYTIAKLLVEKYPDDASTYTVLFNLYASGES 628
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKM-HYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
WD +VR MKE ++K GCSW E+ K+ H+F+ R + Q +++E + LS H+
Sbjct: 629 WDAAKRVRLKMKEVGMRKKPGCSWIEMNEKVCHFFAEDR-SHPQAENVYECLALLSGHME 687
Query: 657 DG 658
G
Sbjct: 688 AG 689
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 236/478 (49%), Gaps = 4/478 (0%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSIS- 144
C + R K +H R+ GL + + LIN+Y C SA+ VF+ R+ +
Sbjct: 13 CTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIRSDVYI 72
Query: 145 WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE-FSCASVLGACAVLGNLKVGMQIHSLV 203
W SL+S Y + LK+F + + + F+ +V+ A LG +G IH++V
Sbjct: 73 WNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMIHTVV 132
Query: 204 FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
K D VA L+ +YAK + + +VF + D+ +W+ +I + Q G A +A+
Sbjct: 133 VKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDAEKAL 192
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
+LF +M S P+ V+ + + A + + G+++H +K F +V + ++D Y
Sbjct: 193 ELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMY 252
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+C+ LE + + F +M +V+WN++I G++A +ELL M+ EG P+ T +
Sbjct: 253 GRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLT 312
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+IL S + GK H +++ D+++ I +L+D+Y KCG + A VF
Sbjct: 313 SILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKD 372
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
+ SWN M+ GY G +A+++Y M ++P+ TF VLS C + +E+G
Sbjct: 373 VVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIH 432
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
S I + + +++++ +++ G + A S P + + V W ++S +H
Sbjct: 433 LS-ISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIP-KKDVVSWTVMISAYGSH 488
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 161/311 (51%), Gaps = 2/311 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL- 240
S+L C +L+ +H + L D + LIN+Y C+ A VF NI +
Sbjct: 8 SLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIR 67
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQ 299
D+ W++L+ GY++ + + +F ++ + + +P T+ V+ A+ + GR
Sbjct: 68 SDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRM 127
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H++++K G VA++++ Y+K L E+S++ FDEM E DV SWN +I+
Sbjct: 128 IHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGD 187
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A+EL M PN + + ++ S + +E GK+ H +K F+ + + SA
Sbjct: 188 AEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSA 247
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMY +C L AR+VF + K+LV+WN+M+ GY G + +E+ + M +P+
Sbjct: 248 LVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPS 307
Query: 480 DNTFIGVLSAC 490
T +L AC
Sbjct: 308 QTTLTSILMAC 318
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 206/669 (30%), Positives = 344/669 (51%), Gaps = 4/669 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +G+ ++ T L FS A+ LF +P+ ++ ++ L+ GFS P ++
Sbjct: 36 ILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSI 95
Query: 62 N-YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ Y L L P+ +TY AV+AC+ + + +H G N V + L+++
Sbjct: 96 SLYTHLRRNTNLSPDNFTYAFAVAACS---NDKHLMLLHAHSIIDGYGSNVFVGSALVDL 152
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K + A+ VFD ER+++ W ++++ + +++F GV + +
Sbjct: 153 YCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTV 212
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL A A L LKVGM I L K F +V GLI+LY+KC ++ A +F I
Sbjct: 213 TAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINR 272
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
PDL A++A+I G+ G ++ LF ++ SG S T ++ + +
Sbjct: 273 PDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSI 332
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +K G V+ Y+K ++ + FDE E VV+WNA+I+G+ +
Sbjct: 333 HGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGST 392
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
AI L K+M+ PN T + IL+ + + ++ +GK H I + N+ + +AL
Sbjct: 393 ETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTAL 452
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAKCG +++A ++FD +S KN V+WNTM+ GY HG G EAL++Y+ M P+
Sbjct: 453 VDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSA 512
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ VL AC H GLV EG F++M+ + I P ++H A +V + GQ +A EFIK
Sbjct: 513 VTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIK 572
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
P+EP VW LL C HKD + R A+E++ DP +++LSN+Y+ + +
Sbjct: 573 KMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPK 632
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
A +R+++K++ L K GC+ E+ H F + + D++ + +L+ + + GY
Sbjct: 633 AASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGY 692
Query: 661 VPDPIYSSH 669
+ + + H
Sbjct: 693 QAETVPALH 701
>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 218/634 (34%), Positives = 343/634 (54%), Gaps = 7/634 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF + + LL +Y + ++ A+K+F EMP R+++SWS++IS + G
Sbjct: 125 IIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEG 184
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR MV P+ + V AC G R K HG + + G+E + V + LI M
Sbjct: 185 LDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFM 244
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L SA+ VF+ R++ +W +++SSY G L +F+ +K+ V + +
Sbjct: 245 YAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTM 304
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFD-KFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+L +C L L+ G +H +V K L+ + + L+ LYA K DL ++ I
Sbjct: 305 RIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIG 364
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ W+ LI YAQ G E +DLFV+M G MP + + L A + E G Q
Sbjct: 365 GRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQ 424
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +IK F +V N++++ YSKC ++ + FD+M+ VV+WN++I+G + +
Sbjct: 425 IHGHVIKRPFMD-EYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGY 483
Query: 360 YGEAIELLKDMLFEGHCPNL--YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+AI L M CP + + +++ S + +E GK H ++ G + I
Sbjct: 484 STKAISLFDLMYVT--CPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIE 541
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ALVDMYAKCG L A++VFD++S +++VSW++++ Y HG E + ++S M E+ IK
Sbjct: 542 TALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIK 601
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
PND T + VLSAC H G V+EG +FNSM RD GI P+ +H +V L + G AYE
Sbjct: 602 PNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDFGIEPKREHFVCIVDLLSRAGDLDEAYE 660
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
IK P P +W LL+GC+ H+ + + + ++ + +DT + +LSN+YA
Sbjct: 661 IIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGE 720
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
W+E +VR +MK LKK S EL K + F
Sbjct: 721 WNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRF 754
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 155/592 (26%), Positives = 286/592 (48%), Gaps = 6/592 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + H + + L+ Y + + + +F + W L+ G + A
Sbjct: 24 IIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGCYQEA 83
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ + M+ ++ N YT+ + AC+ GD G+ +HGR+ +SG +++ V+ L+++
Sbjct: 84 ISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSV 143
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YG+ G L SA+ VF R+ +SW S++SS + GE GL F G
Sbjct: 144 YGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLV 203
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+V+ AC LG L++ H + K +E D+FV LI +YAKC L A VF N+
Sbjct: 204 LTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTY 263
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ W+A+I Y G EA+ LFV M + + P+ VT +L + ++ G+ +
Sbjct: 264 RSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSV 323
Query: 301 HSLIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H ++IK ++ + T+L+ Y+ + K E+ + WN LI+ +
Sbjct: 324 HCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGL 383
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
E ++L M +G P+ ++ ++ L+ S + ++ G Q H ++K F V S
Sbjct: 384 LKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYVFNS- 442
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L++MY+KCG ++ A +FD + K +V+WN+M+ G +Q+G +A+ ++ +M +
Sbjct: 443 LINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIG 502
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ F+ V+ AC H+G +E+G + +I G+ + ++V ++A G + A
Sbjct: 503 EVAFVSVIQACSHLGFLEKGKWIHHKLI-TCGVRKCIFIETALVDMYAKCGDLQTAQRVF 561
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILST--DPEDTSAHIMLS 589
+ E + V W L+S H + + K+L + P D + +LS
Sbjct: 562 DNMS-ERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLS 612
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 219/469 (46%), Gaps = 10/469 (2%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
R ++H + + L + S LI Y + G L S+ VF +S W LL S+
Sbjct: 15 RQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSH 74
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
G + + ++ + + ++ SVL AC+ G+L VG ++H + K + D
Sbjct: 75 VWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDP 134
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
V L+++Y + LD A +VF + L DL +WS++I + G+ E +D F M S
Sbjct: 135 VVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSE 194
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G P V V+ A ++ + H I+K G + FV ++++ Y+KC L +
Sbjct: 195 GGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSA 254
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
F+ + +W A+I+ + + EA+ L M PN T IL +++
Sbjct: 255 EIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNL 314
Query: 393 PAIEWGKQTHCCIVKPGFDSNV-VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ GK HC ++K D+N+ +G L+++YA + + K+ + + + WNT+
Sbjct: 315 SLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTL 374
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
+ YAQ GL +E ++++ MQ+ P+ + LSA + G ++ G +I+
Sbjct: 375 ISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIK--- 431
Query: 512 ISPRMDHIA--SVVHLFACRGQTRRAYEFIKSSPIEPNKVV-WRCLLSG 557
P MD S++++++ G AY +EP VV W ++SG
Sbjct: 432 -RPFMDEYVFNSLINMYSKCGYVDLAYMIFDQ--MEPKGVVTWNSMISG 477
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 203/666 (30%), Positives = 343/666 (51%), Gaps = 5/666 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG + N L+ M ++ A +FD+M ER+ ISW+++ + ++Q G E +
Sbjct: 276 VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 335
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F LM E N T +S + G+ IHG + + G + V N L+ M
Sbjct: 336 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRM 395
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G A VF ++ ISW SL++S+ G + L + SG +++ +
Sbjct: 396 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 455
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S L AC + G +H LV L +++ + L+++Y K ++ + RV +
Sbjct: 456 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 515
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF---ADVKETIGG 297
D+ AW+ALIGGYA+ +A+ F M G+ + +T VL A D+ E G
Sbjct: 516 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER--G 573
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+ LH+ I+ GF S V N+++ Y+KC L S F+ +D ++++WNA++A +
Sbjct: 574 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 633
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
H E ++L+ M G + +++S L+ ++ + +E G+Q H VK GF+ + I
Sbjct: 634 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIF 693
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+A DMY+KCG + + K+ +++L SWN ++ +HG E + M E IK
Sbjct: 694 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 753
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P TF+ +L+AC H GLV++G Y++ + RD G+ P ++H V+ L G+ A
Sbjct: 754 PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAET 813
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FI P++PN +VWR LL+ CK H +L GR AAE + +PED S +++ SN++A
Sbjct: 814 FISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGR 873
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
W++ VRK M K++KK CSW +L++K+ F Q ++++ + + + +
Sbjct: 874 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 933
Query: 658 GGYVPD 663
GYV D
Sbjct: 934 SGYVAD 939
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 151/499 (30%), Positives = 256/499 (51%), Gaps = 30/499 (6%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG +V +L +Y + ++ ++K+F+EMP+RNV+SW++L+ G+S G PE ++
Sbjct: 203 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDI 262
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
++ D G++I G++ +SGLE V N LI+M G
Sbjct: 263 YK-------------------------DESLGRQIIGQVVKSGLESKLAVENSLISMLGS 297
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
G + A ++FD ER++ISW S+ ++Y Q G +IF L R+ ++ + +++
Sbjct: 298 MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTL 357
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L + + K G IH LV K + V L+ +YA + A+ VF + DL
Sbjct: 358 LSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 417
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W++L+ + G++ +A+ L M SSG + VTF+ L A GR LH L
Sbjct: 418 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL 477
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
++ G + N ++ Y K + ES + +M DVV+WNALI G+ +A
Sbjct: 478 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 537
Query: 364 IELLKDMLFEGHCPNLYTYSNILN---ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ + M EG N T ++L+ + D+ +E GK H IV GF+S+ + ++L
Sbjct: 538 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSL 595
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MYAKCG L+ ++ +F+ L ++N+++WN ML A HG G E L++ S M+ + +
Sbjct: 596 ITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQ 655
Query: 481 NTFIGVLSACVHIGLVEEG 499
+F LSA + ++EEG
Sbjct: 656 FSFSEGLSAAAKLAVLEEG 674
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 245/493 (49%), Gaps = 27/493 (5%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V+ N L+ MY KF R+ A+ LFD MP RN +SW+ ++SG ++G+ + +FR M
Sbjct: 106 SVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC 165
Query: 69 CCVLEPNYYTYVGAVSACASRGDA-RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
++P+ + V+AC G R G ++HG + +SGL + +VS ++++YG GL+
Sbjct: 166 DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLV 225
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
S ++ VF+ +RN +SW SL+ Y GE + I+
Sbjct: 226 SCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY---------------------- 263
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ +G QI V K LE V LI++ +D A+ +F + D +W+
Sbjct: 264 ---KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 320
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
++ YAQ G E+ +F M + T S +L V GR +H L++KM
Sbjct: 321 SIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM 380
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
GF S V NT+L Y+ E+ F +M D++SWN+L+A + +A+ LL
Sbjct: 381 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 440
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M+ G N T+++ L E G+ H +V G N +IG+ALV MY K
Sbjct: 441 CSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI 500
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G ++++R+V + +++V+WN ++ GYA+ +AL + M+ + N T + VL
Sbjct: 501 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 560
Query: 488 SACVHIG-LVEEG 499
SAC+ G L+E G
Sbjct: 561 SACLLPGDLLERG 573
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 222/471 (47%), Gaps = 28/471 (5%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
+G+ +H + + L+ +N LINMY K G + A+ +FD RN +SW +++S
Sbjct: 90 TGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIV 149
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL-KVGMQIHSLVFKCALEFDK 212
+ G ++ G++ F G+ S F AS++ AC G++ + G+Q+H V K L D
Sbjct: 150 RVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 209
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
+V+ +++LY + + +VF + ++ +W++L+ GY+ G+ E ID++
Sbjct: 210 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY------ 263
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
K+ GRQ+ ++K G S V N+++ ++ +
Sbjct: 264 -------------------KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 304
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
FD+M E D +SWN++ A + + H E+ + M N T S +L++ +
Sbjct: 305 NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 364
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+WG+ H +VK GFDS V + + L+ MYA GR +A VF + +K+L+SWN+++
Sbjct: 365 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM 424
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
+ G +AL + M + N TF L+AC E+G + ++ G+
Sbjct: 425 ASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGL 483
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
++V ++ G+ + + P + V W L+ G +D
Sbjct: 484 FYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGYAEDED 533
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 23/203 (11%)
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
G+ H VK +V+ + L++MY K GR+ AR +FD + +N VSWNTM+ G +
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG-LVEEG--WHYF---NSMIRDHG 511
GL E +E + M + IKP+ +++AC G + EG H F + ++ D
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG----------CKTH 561
+S + H+ V L +C +R+ +E + + N V W L+ G +
Sbjct: 211 VSTAILHLYGVYGLVSC---SRKVFEEMP----DRNVVSWTSLMVGYSDKGEPEEVIDIY 263
Query: 562 KDLVLGRYAAEKILSTDPEDTSA 584
KD LGR +++ + E A
Sbjct: 264 KDESLGRQIIGQVVKSGLESKLA 286
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 189/494 (38%), Positives = 290/494 (58%), Gaps = 4/494 (0%)
Query: 173 VAISEFSC---ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
V+ SEF+ A+ L C G +H + K D F L+N+Y K + L
Sbjct: 31 VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLC 90
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
AS++F + + ++ LI GYA+ + EAI+LFV++ ++P++ TF+ VL A A
Sbjct: 91 DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQACA 149
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
++ G Q+H +IK+G S FV+N ++D Y+KC +E S++ F E + V+WN
Sbjct: 150 TMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNT 209
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I GH+ +A+ L +ML TYS+ L + + A+E G Q H VK
Sbjct: 210 VIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTT 269
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
FD ++V+ +AL+DMYAKCG + DAR VFD ++ ++ VSWN M+ GY+ HGLGREAL I+
Sbjct: 270 FDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFD 329
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
MQE ++KP+ TF+GVLSAC + GL+++G YF SMI+DHGI P ++H +V L
Sbjct: 330 KMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRG 389
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
G +A + I P +P+ +VWR LL C H D+ LGR +A+++L +P+D + H++LS
Sbjct: 390 GHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLS 449
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMN 649
N+YA A WD A VRK MK K +KK+ G SW E Q +H F+ + + ++ ++
Sbjct: 450 NMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLE 509
Query: 650 QLSVHLFDGGYVPD 663
L + GY+P+
Sbjct: 510 WLHMKTKKAGYIPN 523
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 210/409 (51%), Gaps = 7/409 (1%)
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
E N + Y A+ C + + GK +H + + G L+ N L+NMY K L A
Sbjct: 35 EFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASK 94
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
+FD ERN+IS+V+L+ Y + + +++F+ + V ++F+ ASVL ACA +
Sbjct: 95 LFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEG 153
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L +G QIH V K L D FV+ L+++YAKC +++ + +F+ + W+ +I G
Sbjct: 154 LNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVG 213
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
+ QLG +A+ LF+ M + +EVT+S L A A + G Q+HSL +K F
Sbjct: 214 HVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKD 273
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V N ++D Y+KC ++++ FD M++ D VSWNA+I+G+ EA+ + M
Sbjct: 274 IVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQE 333
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLN 431
P+ T+ +L+ ++ ++ G+ +++ G + + + +V + + G L+
Sbjct: 334 TEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLD 393
Query: 432 DARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGR-EALEIYSMMQENK 475
A K+ D + +++ W +L H LGR A + M ++K
Sbjct: 394 KAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDK 442
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 189/360 (52%), Gaps = 7/360 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
++ +N LL MYVK + DA KLFDEMPERN IS+ LI G+++ A+ F +
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
VL PN +T+ + ACA+ G +IH + + GL + VSN L+++Y KCG +
Sbjct: 132 REVL-PNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRME 190
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
++ +F S RN ++W +++ + Q G+ L++FL + V +E + +S L ACA
Sbjct: 191 NSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACA 250
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L L+ G+QIHSL K + D V LI++YAKC + A VF + D +W+A
Sbjct: 251 SLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNA 310
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-LHSLIIKM 307
+I GY+ G EA+ +F KM + + P ++TF VL A A+ G+ S+I
Sbjct: 311 MISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDH 370
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIEL 366
G ++ + L++++K DE+ + V+ W AL L +C IEL
Sbjct: 371 GIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRAL----LGACVIHNDIEL 426
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 6/256 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G H +V N L+ +Y K R+ ++ +LF E P RN ++W+ +I G Q+G E A
Sbjct: 164 VIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKA 223
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ ++ TY A+ ACAS G +IH ++ + + V+N LI+M
Sbjct: 224 LRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDM 283
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A+ VFD +++ +SW +++S Y G L+IF +++ V + +
Sbjct: 284 YAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTF 343
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCALE--FDKFVAMGLINLYAKCEKLDLASRVFSN 237
VL ACA G L G S++ +E + + M + L + LD A ++
Sbjct: 344 VGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCM--VWLLGRGGHLDKAVKLIDE 401
Query: 238 IQL-PDLTAWSALIGG 252
I P + W AL+G
Sbjct: 402 IPFQPSVMVWRALLGA 417
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 203/666 (30%), Positives = 343/666 (51%), Gaps = 5/666 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG + N L+ M ++ A +FD+M ER+ ISW+++ + ++Q G E +
Sbjct: 169 VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 228
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F LM E N T +S + G+ IHG + + G + V N L+ M
Sbjct: 229 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRM 288
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G A VF ++ ISW SL++S+ G + L + SG +++ +
Sbjct: 289 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 348
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S L AC + G +H LV L +++ + L+++Y K ++ + RV +
Sbjct: 349 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 408
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF---ADVKETIGG 297
D+ AW+ALIGGYA+ +A+ F M G+ + +T VL A D+ E G
Sbjct: 409 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER--G 466
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+ LH+ I+ GF S V N+++ Y+KC L S F+ +D ++++WNA++A +
Sbjct: 467 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 526
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
H E ++L+ M G + +++S L+ ++ + +E G+Q H VK GF+ + I
Sbjct: 527 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIF 586
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+A DMY+KCG + + K+ +++L SWN ++ +HG E + M E IK
Sbjct: 587 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 646
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P TF+ +L+AC H GLV++G Y++ + RD G+ P ++H V+ L G+ A
Sbjct: 647 PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAET 706
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FI P++PN +VWR LL+ CK H +L GR AAE + +PED S +++ SN++A
Sbjct: 707 FISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGR 766
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
W++ VRK M K++KK CSW +L++K+ F Q ++++ + + + +
Sbjct: 767 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 826
Query: 658 GGYVPD 663
GYV D
Sbjct: 827 SGYVAD 832
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/499 (31%), Positives = 264/499 (52%), Gaps = 5/499 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG +V +L +Y + ++ ++K+F+EMP+RNV+SW++L+ G+S G PE ++
Sbjct: 71 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDI 130
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
++ M + N + +S+C D G++I G++ +SGLE V N LI+M G
Sbjct: 131 YKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGS 190
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
G + A ++FD ER++ISW S+ ++Y Q G +IF L R+ ++ + +++
Sbjct: 191 MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTL 250
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L + + K G IH LV K + V L+ +YA + A+ VF + DL
Sbjct: 251 LSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 310
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W++L+ + G++ +A+ L M SSG + VTF+ L A GR LH L
Sbjct: 311 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL 370
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
++ G + N ++ Y K + ES + +M DVV+WNALI G+ +A
Sbjct: 371 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 430
Query: 364 IELLKDMLFEGHCPNLYTYSNILN---ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ + M EG N T ++L+ + D+ +E GK H IV GF+S+ + ++L
Sbjct: 431 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSL 488
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MYAKCG L+ ++ +F+ L ++N+++WN ML A HG G E L++ S M+ + +
Sbjct: 489 ITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQ 548
Query: 481 NTFIGVLSACVHIGLVEEG 499
+F LSA + ++EEG
Sbjct: 549 FSFSEGLSAAAKLAVLEEG 567
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 152/527 (28%), Positives = 259/527 (49%), Gaps = 2/527 (0%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDA-RS 94
MP RN +SW+ ++SG ++G+ + +FR M ++P+ + V+AC G R
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
G ++HG + +SGL + +VS ++++YG GL+S ++ VF+ +RN +SW SL+ Y
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
GE + I+ R GV +E S + V+ +C +L + +G QI V K LE V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
LI++ +D A+ +F + D +W+++ YAQ G E+ +F M
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+ T S +L V GR +H L++KMGF S V NT+L Y+ E+
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
F +M D++SWN+L+A + +A+ LL M+ G N T+++ L
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
E G+ H +V G N +IG+ALV MY K G ++++R+V + +++V+WN ++ G
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
YA+ +AL + M+ + N T + VLSAC+ G + E ++ I G
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
S++ ++A G + + N + W +L+ H
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHH 526
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 187/593 (31%), Positives = 326/593 (54%), Gaps = 3/593 (0%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P T+ + CA+R D +G+ +H ++ GL S S L NMY KC + A+ V
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLK--IFLLSRKSGVAISEFSCASVLGACAVLG 191
FD R+ ++W ++++ Y + G ++ + + + G + SVL ACA
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
L ++H+ + L+ V+ +++ Y KC ++ A VF + + + +W+A+I
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
GYA G A EA+ LF +M G+ ++ + L A ++ R++H L++++G SS
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
V N ++ Y+KC+ + + + F+E+ ++ +SWNA+I G + +A L M
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
E P+ +T +++ +DI + H ++ D +V + +AL+DMY+KCGR+
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ AR++FD +++++WN M+ GY HG G+ A+E++ M+ PN+ TF+ VL+AC
Sbjct: 374 SIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAAC 433
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
H GLV+EG YF SM +D+G+ P M+H ++V L G+ A+ FIK+ PIEP V
Sbjct: 434 SHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISV 493
Query: 551 WRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
+ +L CK HK++ L +A+ I PE+ H++L+N+YA A+MW + A+VR M++
Sbjct: 494 YGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEK 553
Query: 611 KSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
K L+K G S +L+N++H F + D++ + +L + D GYVPD
Sbjct: 554 KGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPD 606
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 219/433 (50%), Gaps = 4/433 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G I L MY K R DA+++FD MP R+ ++W+A+++G+++ G+P A+
Sbjct: 46 GLASESIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAV 105
Query: 65 RLMVC--CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
M P+ T V + ACA + +E+H R+GL+ +VS +++ Y
Sbjct: 106 VRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYC 165
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG + +A+ VFD RNS+SW +++ Y G + +F + GV +++ S +
Sbjct: 166 KCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLA 225
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-QLP 241
L AC LG L ++H L+ + L + V LI YAKC++ DLA++VF+ +
Sbjct: 226 ALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKK 285
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+W+A+I G+ Q +A LF +M + P T V+ A AD+ + + R +H
Sbjct: 286 TRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIH 345
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
I+ +V ++D YSKC + + + FD + V++WNA+I G+ +
Sbjct: 346 GYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQ 405
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSAL 420
A+EL ++M G PN T+ ++L S ++ G++ + K G + + +
Sbjct: 406 AAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTM 465
Query: 421 VDMYAKCGRLNDA 433
VD+ + G+L++A
Sbjct: 466 VDLLGRAGKLDEA 478
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 174/379 (45%), Gaps = 12/379 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G V +L Y K + A+ +FD MP RN +SW+A+I G++ G A+
Sbjct: 146 LRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAM 205
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F MV ++ + + A+ AC G + +H + R GL N V+N LI Y
Sbjct: 206 ALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTY 265
Query: 122 GKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQ--CGEHVHGLKIFLLSRKSGVAISEF 178
KC A VF+ ++ ISW +++ + Q C E ++F + V F
Sbjct: 266 AKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAE--RLFARMQLENVRPDSF 323
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ SV+ A A + + IH + L+ D +V LI++Y+KC ++ +A R+F +
Sbjct: 324 TLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSA 383
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ + W+A+I GY G A++LF +M +G +P+E TF VL A + G+
Sbjct: 384 RDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQ 443
Query: 299 Q-LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+ S+ G T++D + L+E+ M +S + L +
Sbjct: 444 KYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGIS---VYGAMLGA 500
Query: 358 CHYGEAIELLKD---MLFE 373
C + +EL ++ ++FE
Sbjct: 501 CKLHKNVELAEESAQIIFE 519
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 3/255 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNV-ISWSALISGFSQIGMPEV 59
++ G NV N L+ Y K R + A ++F+E+ + ISW+A+I GF+Q PE
Sbjct: 246 LVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPED 305
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
A F M + P+ +T V + A A D + IHG R L+ + +V LI+
Sbjct: 306 AERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALID 365
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG +S A+ +FD++ +R+ I+W +++ Y G +++F + +G +E +
Sbjct: 366 MYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETT 425
Query: 180 CASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
SVL AC+ G + G + S+ LE +++L + KLD A N+
Sbjct: 426 FLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNM 485
Query: 239 QL-PDLTAWSALIGG 252
+ P ++ + A++G
Sbjct: 486 PIEPGISVYGAMLGA 500
>gi|224063136|ref|XP_002301008.1| predicted protein [Populus trichocarpa]
gi|222842734|gb|EEE80281.1| predicted protein [Populus trichocarpa]
Length = 691
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 208/664 (31%), Positives = 340/664 (51%), Gaps = 39/664 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G+ NV +L+ MY F+ + DA KLFDEMP +N+++W+ ++S ++ G P A
Sbjct: 29 LIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDEMPVKNIVTWTTMVSAYTSNGKPREA 88
Query: 61 LNYFRLMVCCVLE-PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ + M+ E PN + Y + AC G+ G+ IH R R L+ + + N L++
Sbjct: 89 IKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLIHKRFSRENLDYDIVLLNALLD 148
Query: 120 MYGKCGLLSSAQFVFDASLER-NSISWVSLLSSYCQCG---EHVH--------------- 160
MY KCG LS A+ VFD R NS SW +++S Y + G E V+
Sbjct: 149 MYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGLVEEAVNLFNQMPDRNVVSWNT 208
Query: 161 ------------GLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
L+ + G+ + +F+ L C+ G L G QIH V K L
Sbjct: 209 IIAGLAENGSSRALQFVCKMHREGIKLDKFTFPCALKTCSYAGFLVAGKQIHCYVLKSGL 268
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQ------LPDLTAWSALIGGYAQLGKACEA 262
E F L+++Y+ C LD A R+F L W++++ GY K A
Sbjct: 269 ESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGTGSICDSLVLWNSMLSGYVVHEKNRAA 328
Query: 263 IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
+++ ++ SG T S L ++ G Q+H+LI+ G V + ++D
Sbjct: 329 VNMIAQIHHSGASVDSYTLSSALKVCINLLNVRLGIQVHALIVTSGHELDYVVGSILVDL 388
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
Y+K ++++ K F + + D+V+W+ L+ G A+ L +DM+ G + Y
Sbjct: 389 YAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCAKMELNSLALSLFRDMVTFGVEVDQYIV 448
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
SN+L + S + +I GKQ H +K G+++ V +AL+DMY+KCG + D +F ++
Sbjct: 449 SNVLKVCSSLASIGTGKQVHAFCIKRGYETEQVTITALIDMYSKCGEVEDGLVLFGCVAD 508
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
+++V W ++VG AQ+G EALEI+ M ++ +KPN+ T++GVL+AC H GLV E
Sbjct: 509 RDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKPNEVTYLGVLTACRHAGLVVEAQTI 568
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
F +M DH + P+++H +V L G + + I P +P+K +W +L C TH+
Sbjct: 569 FGTMKCDHRLEPQLEHYYCMVDLLCQAGYFKEVEKLIAEMPFKPDKTIWSSMLGACGTHR 628
Query: 563 DLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWT 622
+ L AE +L+ P D S ++MLSN Y MWD ++VR+ K+ +K G SW
Sbjct: 629 NTGLVSTIAENLLANCPNDPSIYVMLSNAYGTLGMWDSLSQVREAAKKLGVKA-AGTSWI 687
Query: 623 ELQN 626
E+ +
Sbjct: 688 EISS 691
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 150/613 (24%), Positives = 271/613 (44%), Gaps = 82/613 (13%)
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
V A+ C + GK H + ++G N +++ L++MY L A +FD
Sbjct: 7 VAAIRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDEMPV 66
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+N ++W +++S+Y G+ +K++ +L KS V + F + VL AC ++G +++G
Sbjct: 67 KNIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVP-NGFMYSVVLKACGLVGEIELGR 125
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALIGGYAQL 256
IH + L++D + L+++Y KC L A +VF I L + T+W+ +I GY +
Sbjct: 126 LIHKRFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKE 185
Query: 257 GKACEAIDLF------------------------------VKMFSSGLMPSEVTFSYVLG 286
G EA++LF KM G+ + TF L
Sbjct: 186 GLVEEAVNLFNQMPDRNVVSWNTIIAGLAENGSSRALQFVCKMHREGIKLDKFTFPCALK 245
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE----- 341
+ + G+Q+H ++K G S F + ++D YS C L+++++ FD+
Sbjct: 246 TCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGTGSI 305
Query: 342 -HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
+V WN++++G++ A+ ++ + G + YT S+ L + ++ + G Q
Sbjct: 306 CDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVRLGIQ 365
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
H IV G + + V+GS LVD+YAK G + DA K+F L K++V+W+ +L+G A+ L
Sbjct: 366 VHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCAKMEL 425
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
AL ++ M ++ + VL C + + G I+ G I
Sbjct: 426 NSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIK-RGYETEQVTIT 484
Query: 521 SVVH-------------LFAC------------------RGQTRRAYEFIK---SSPIEP 546
+++ LF C G+ A E + S ++P
Sbjct: 485 ALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKP 544
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA---K 603
N+V + +L+ C+ H LV+ A+ I T D L + Y ++ + +
Sbjct: 545 NEVTYLGVLTACR-HAGLVV---EAQTIFGTMKCDHRLEPQLEHYYCMVDLLCQAGYFKE 600
Query: 604 VRKIMKEKSLKKD 616
V K++ E K D
Sbjct: 601 VEKLIAEMPFKPD 613
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 199/629 (31%), Positives = 341/629 (54%), Gaps = 1/629 (0%)
Query: 25 RINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVS 84
R+++A + + + + +I GF+ G+P AL +R M+ P+ +T+ V
Sbjct: 56 RMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVK 115
Query: 85 ACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSIS 144
CA G G+ HG + + GLE + + N L+ Y K GL+ A+ VFD R+ ++
Sbjct: 116 CCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVT 175
Query: 145 WVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV 203
W ++ Y G L F + V + L AC + + G +IH V
Sbjct: 176 WNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYV 235
Query: 204 FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
+ LE D V L+++Y KC ++ A VF+ + L + W+ +IGGYA + EA
Sbjct: 236 IRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAF 295
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
D F++M + GL VT +L A A + ++ GR +H +++ F + +L+ Y
Sbjct: 296 DCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMY 355
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
K +E S K F ++ +VSWN +IA ++ Y EAI L ++L + P+ +T S
Sbjct: 356 GKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMS 415
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
++ + ++ +Q H I+ G+ N +I +A++ MYA+ G + +R++FD + SK
Sbjct: 416 TVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSK 475
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
+++SWNTM++GYA HG G+ ALE++ M+ N ++PN++TF+ VL+AC GLV+EGW +F
Sbjct: 476 DVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHF 535
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
N M++++G+ P+++H + L G R +FI+S PI+P VW LL+ + D
Sbjct: 536 NLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQND 595
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
+ + YAAE+I + ++T +I+LS++YA+A W++ +VR +MKEK L++ S E
Sbjct: 596 IDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVE 655
Query: 624 LQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
L + F+ + Q +HEV + LS
Sbjct: 656 LHSTACSFANGDMSHSQSRTIHEVSDILS 684
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 195/391 (49%), Gaps = 1/391 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G +V T N L+ Y K + DA+++FD MP R++++W+ ++ G+ G+ +A
Sbjct: 133 VIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLA 192
Query: 61 LNYFRLMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L F+ M + ++ + + A++AC + GKEIHG + R GLE + V L++
Sbjct: 193 LACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLD 252
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG ++ A+ VF R ++W ++ Y F+ R G+ + +
Sbjct: 253 MYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVT 312
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++L ACA + G +H V + + L+ +Y K K++ + ++F I
Sbjct: 313 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIA 372
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
L +W+ +I Y EAI LF+++ + L P T S V+ AF + RQ
Sbjct: 373 NKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQ 432
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+HS II +G++ T + N VL Y++ + S + FD+M DV+SWN +I G+
Sbjct: 433 IHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQ 492
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
A+E+ +M + G PN T+ ++L S
Sbjct: 493 GKTALEMFDEMKYNGLQPNESTFVSVLTACS 523
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 104/196 (53%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ F P+V+ LL MY K ++ ++K+F ++ + ++SW+ +I+ + M A
Sbjct: 336 VVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEA 395
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F ++ L P+Y+T V A G R ++IH + G N+ + N +++M
Sbjct: 396 ITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHM 455
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G + +++ +FD + ++ ISW +++ Y G+ L++F + +G+ +E +
Sbjct: 456 YARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTF 515
Query: 181 ASVLGACAVLGNLKVG 196
SVL AC+V G + G
Sbjct: 516 VSVLTACSVSGLVDEG 531
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ N + N +L MY + + ++++FD+M ++VISW+ +I G++ G + A
Sbjct: 437 IIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTA 496
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F M L+PN T+V ++AC+ G G M + G+ C+ +
Sbjct: 497 LEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTD 556
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ G+ G L QF+ ++ S W SLL++
Sbjct: 557 LLGREGDLREVLQFIESMPIDPTSRVWGSLLTA 589
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+LV A GR+++A + + + N M+ G+A GL AL Y M E+ +P
Sbjct: 46 SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARP 105
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF V+ C +G ++EG + M+ G+ + S+V +A G A
Sbjct: 106 DRFTFPVVVKCCARLGGLDEG-RAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERV 164
Query: 539 IKSSPIEPNKVVWRCLLSG 557
P+ + V W ++ G
Sbjct: 165 FDGMPVR-DIVTWNIMVDG 182
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 204/650 (31%), Positives = 343/650 (52%), Gaps = 18/650 (2%)
Query: 13 YNHLLLMY-VKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
+N LL Y V + A++LFDE+P + SW++L++ IG A R M
Sbjct: 37 WNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGAHPAACRLLRAMHERG 96
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L N + A+ + A+ G + G ++H ++GL N + L++MY KCG A
Sbjct: 97 LAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDAC 156
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL-----GA 186
+FD ERN++SW +L++ Y + G+ +++F+ + G E + A++L
Sbjct: 157 RLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALLTVVNDST 216
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-QLPDLTA 245
C ++ Q+H + K V I Y++C L + R+F I DL +
Sbjct: 217 CFLM------HQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIFDEIGDRSDLIS 270
Query: 246 WSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+A++G YA G EA+ F M +SG+ P +F+ ++ A A+ ++ GG +H L+
Sbjct: 271 WNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRDH-GGTVIHGLV 329
Query: 305 IKMGFSSFTFVANTVLDFYSKCE---LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
K GF T V N ++ Y++ ++E++ K FD + D VSWN+++ G+
Sbjct: 330 SKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSA 389
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A+ + M E + Y +S L SD+ + G+Q H +++ GF SN + S+L+
Sbjct: 390 DALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSSSLI 449
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
MY+K G L+DA K F+ + V WN+M+ GYAQHG + +++ M E K+ +
Sbjct: 450 FMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHI 509
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+G+++AC H GLV+EG N+M +GI RM+H A + L+ GQ +A E I S
Sbjct: 510 TFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKELIDS 569
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P EP+ +VW LL C+ H ++ L A +L +P S +++LSN+Y+ MW +
Sbjct: 570 MPFEPDAMVWMTLLGACRVHGNMELASDVASHLLEAEPRQHSTYVLLSNMYSGLGMWSDR 629
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
A V+K MK K L K G SW E++N++H F+ + + +++E+++ L
Sbjct: 630 AIVQKEMKNKGLSKVPGWSWIEVKNEVHSFNAEDGSHPRMDEIYEMLSLL 679
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 150/559 (26%), Positives = 275/559 (49%), Gaps = 41/559 (7%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G NV + LL MY K R DA +LFD MPERN +SW+AL++G+ + G A+
Sbjct: 128 VKAGLADNVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAV 187
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M P+ T+ A+ + ++HG++ + G L V N I Y
Sbjct: 188 QLFVEMEREGFLPDEATF-AALLTVVNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAY 246
Query: 122 GKCGLLSSAQFVFDASLERNS-ISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
+CG L++++ +FD +R+ ISW ++L +Y G ++ F + R SGV +S
Sbjct: 247 SQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYS 306
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK---LDLASRVFS 236
S++ ACA + G IH LV K E V LI +Y + + ++ A + F
Sbjct: 307 FTSIISACAEHRD-HGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFD 365
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
++ L D +W++++ GY+Q G + +A+ F M S + E FS L + +D+
Sbjct: 366 SLLLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRL 425
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
GRQ+H L+I+ GF+S FV+++++ YSK +L++++K+F+E D+ V WN+++ G+ A
Sbjct: 426 GRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGY-A 484
Query: 357 SCHYGEAIELLKDMLFEGHCP-NLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNV 414
+A+ L + + E P + T+ ++ S ++ G + + + G +
Sbjct: 485 QHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRM 544
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ +D+Y + G+L+ A+++ D + + + W T+L HG A ++ S + E
Sbjct: 545 EHYACGIDLYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGACRVHGNMELASDVASHLLE 604
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEE-----------------GW---------HYFNSMI 507
+ + + +T++ + + +G+ + GW H FN+
Sbjct: 605 AEPRQH-STYVLLSNMYSGLGMWSDRAIVQKEMKNKGLSKVPGWSWIEVKNEVHSFNA-- 661
Query: 508 RDHGISPRMDHIASVVHLF 526
+ G PRMD I ++ L
Sbjct: 662 -EDGSHPRMDEIYEMLSLL 679
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF N + L+ MY K ++DA K F+E + + + W++++ G++Q G +
Sbjct: 433 VIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAV 492
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM-YRSGLELNSHVSNCLIN 119
+ F M+ + ++ T+VG ++AC+ G G EI M R G+ L C I+
Sbjct: 493 RSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGID 552
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHG 161
+YG+ G L A+ + D+ E +++ W++LL + C+ VHG
Sbjct: 553 LYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGA-CR----VHG 590
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 2/158 (1%)
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
++H ++K G S L L AR++FD + + SWN++L + G
Sbjct: 21 KSHATLLKSGVTSPTPWNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIG 80
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
A + M E + N L + +G G +S+ G++ +
Sbjct: 81 AHPAACRLLRAMHERGLAANTFALGSALRSAAAMGCSALGTQ-LHSLAVKAGLADNVFSA 139
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+++H++A G+TR A P E N V W L++G
Sbjct: 140 TALLHMYAKCGRTRDACRLFDGMP-ERNTVSWNALVAG 176
>gi|225459473|ref|XP_002284396.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Vitis vinifera]
Length = 690
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 211/663 (31%), Positives = 342/663 (51%), Gaps = 38/663 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G +V N+LL MYV S + DA++LFDE ERNV +W+ +IS +S G P+ A
Sbjct: 29 IIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLERNVATWTTMISAYSSSGRPDTA 88
Query: 61 LNYFRLMVCCVLE-PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L ++ M+ E PN + Y + AC GD SGK IHGR++R+ L ++ + N L++
Sbjct: 89 LKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLIHGRVFRANLGFDTVLMNTLLD 148
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ------------------------- 154
MY KCG LSSA+ VFD L +S SW +++S Y +
Sbjct: 149 MYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLMEEAVNLFYQMPEPDTVSWNSI 208
Query: 155 -----CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
C E + L+ + + G+ + F+ + L C L + QIH V K
Sbjct: 209 IAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCALKTCGCFQLLVMVKQIHCYVNKSGFG 268
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQ------LPDLTAWSALIGGYAQLGKACEAI 263
F A L++ Y+ C +LD A ++F L L W++++ GY + AI
Sbjct: 269 SCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASILDCLPLWNSMLSGYVVNEQNSAAI 328
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
+L ++ S G TF L +++ G Q+ L + G+ V + ++D Y
Sbjct: 329 NLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLGLQVQGLAVTSGYELDYVVGSILIDLY 388
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+ ++++L+ F + E D+V W++LI+ L +DM+ + + S
Sbjct: 389 ANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGLNSLVFSLFRDMVNLDIEVDQFIIS 448
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
++L S + + GKQ H VK G++S + ++L+D+YAKCG + D +F S +
Sbjct: 449 SVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTSLIDLYAKCGEIEDGLALFYCTSER 508
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
+ V + +++G Q+G EA+ + M E +KPN+ TF+GVLSAC H GLVEE W F
Sbjct: 509 DTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNEITFLGVLSACRHAGLVEEAWTIF 568
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
M ++ + P ++H +V L + G + A E I P EP++ +W LL C THK
Sbjct: 569 KYMKTEYKMEPHIEHYYCIVELLSQAGCFKEAEELIAEMPFEPDQTIWNSLLGACGTHKK 628
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
L + AE++L+T PED S + LSNVYA MWD++ K+R+++K+ + K+ G SW +
Sbjct: 629 TELVNFIAERLLTTLPEDPSILVTLSNVYATLEMWDDSRKMREVIKKVGM-KEAGKSWIQ 687
Query: 624 LQN 626
+++
Sbjct: 688 IKS 690
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/522 (25%), Positives = 246/522 (47%), Gaps = 51/522 (9%)
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
V + C R G+ +H + + G+ + +N L+ MY LL A+ +FD +LE
Sbjct: 7 VSVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLE 66
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
RN +W +++S+Y G LK + +L KS + F ++VL AC ++G+L+ G
Sbjct: 67 RNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETP-NGFLYSAVLKACGLVGDLESGK 125
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
IH VF+ L FD + L+++Y KC L A +VF +I P T+W+ +I GY + G
Sbjct: 126 LIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEG 185
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG-------------------- 297
EA++LF +M P V+++ ++ F KE++G
Sbjct: 186 LMEEAVNLFYQMPE----PDTVSWNSIIAGFG-CKESLGALRFVCMMHRKGLKLDGFTFS 240
Query: 298 ---------------RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-- 340
+Q+H + K GF S F A+ ++D YS C L+E++K FDE
Sbjct: 241 CALKTCGCFQLLVMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCC 300
Query: 341 EHDVVS----WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
++ WN++++G++ + AI L+ + G + +T+ + L + ++
Sbjct: 301 SASILDCLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFR 360
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G Q V G++ + V+GS L+D+YA G++ DA ++F L K++V W++++
Sbjct: 361 LGLQVQGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCT 420
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
+ GL ++ M I+ + VL AC + + G + ++ S R+
Sbjct: 421 KMGLNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERI 480
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
+ S++ L+A G+ + E + V + ++ GC
Sbjct: 481 T-VTSLIDLYAKCGEIEDGLALFYCTS-ERDTVCYTGIIMGC 520
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+L+ +++ A G+ H I+K G ++V + L+ MY L DAR++F
Sbjct: 2 DLHRIVSVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLF 61
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK-PNDNTFIGVLSACVHIGLV 496
D +N+ +W TM+ Y+ G AL+ Y M E+K + PN + VL AC +G +
Sbjct: 62 DETLERNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDL 121
Query: 497 EEG 499
E G
Sbjct: 122 ESG 124
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 185/482 (38%), Positives = 282/482 (58%), Gaps = 1/482 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
++L C LG LK G +H V + D + L+ +YA+C L+ A R+F +
Sbjct: 79 TLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHR 138
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W+++I GYAQ +A +A+ LF +M S G P+E T S ++ + GRQ+H
Sbjct: 139 DMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIH 198
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ K G S FV ++++D Y++C L E++ FD++ + VSWNALIAG+
Sbjct: 199 ACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGE 258
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA+ L M EG+ P +TYS +L+ S + +E GK H ++K +G+ L+
Sbjct: 259 EALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLL 318
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
MYAK G + DA KVFD L ++VS N+ML+GYAQHGLG+EA + + M I+PND
Sbjct: 319 HMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDI 378
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL+AC H L++EG HYF ++R + I P++ H A++V L G +A FI+
Sbjct: 379 TFLSVLTACSHARLLDEGKHYFG-LMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEE 437
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
PIEP +W LL K HK+ +G YAA+++ DP H +L+N+YA A W++
Sbjct: 438 MPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDV 497
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
AKVRKIMK+ +KK+ CSW E++N +H F + A Q +H++ +L+ + + GYV
Sbjct: 498 AKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYV 557
Query: 662 PD 663
PD
Sbjct: 558 PD 559
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 186/354 (52%), Gaps = 1/354 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S F +++ N LL MY + + A++LFDEMP R+++SW+++I+G++Q A
Sbjct: 100 VLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDA 159
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ EPN +T V C G++IH ++ G N V + L++M
Sbjct: 160 LLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDM 219
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG L A VFD +N +SW +L++ Y + GE L +F+ ++ G +EF+
Sbjct: 220 YARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTY 279
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+++L +C+ +G L+ G +H+ + K + + +V L+++YAK + A +VF +
Sbjct: 280 SALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVK 339
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ + ++++ GYAQ G EA F +M G+ P+++TF VL A + + G+
Sbjct: 340 VDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHY 399
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
L+ K T++D + LL+++ +EM E V W AL+
Sbjct: 400 FGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGA 453
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 199/402 (49%), Gaps = 1/402 (0%)
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
+ L+ L+ C LEP+ Y + C G + GK +H + S + + + N L
Sbjct: 56 KTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSL 115
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+ MY +CG L A+ +FD R+ +SW S+++ Y Q L +F G +E
Sbjct: 116 LFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNE 175
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
F+ +S++ C + + G QIH+ +K + FV L+++YA+C L A VF
Sbjct: 176 FTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDK 235
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ + +W+ALI GYA+ G+ EA+ LFV+M G P+E T+S +L + + + G
Sbjct: 236 LGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQG 295
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+ LH+ ++K +V NT+L Y+K + ++ K FD++ + DVVS N+++ G+
Sbjct: 296 KWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQH 355
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA + +M+ G PN T+ ++L S ++ GK + K + V
Sbjct: 356 GLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHY 415
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQH 458
+ +VD+ + G L+ A+ + + + V+ W +L H
Sbjct: 416 ATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMH 457
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 181/347 (52%), Gaps = 13/347 (3%)
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
L P ++ +L + + G+ +H ++ F + N++L Y++C LE +
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
+ FDEM D+VSW ++I G+ + +A+ L ML +G PN +T S+++ +
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+ G+Q H C K G SNV +GS+LVDMYA+CG L +A VFD L KN VSWN ++
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIA 249
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG-WHYFNSMIRDHGI 512
GYA+ G G EAL ++ MQ +P + T+ +LS+C +G +E+G W + + M +
Sbjct: 250 GYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKL 309
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
+ + +++H++A G R A E + ++ + V +L G H LG+ AA+
Sbjct: 310 VGYVGN--TLLHMYAKSGSIRDA-EKVFDKLVKVDVVSCNSMLIGYAQHG---LGKEAAQ 363
Query: 573 KI-----LSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
+ +P D + +L+ + A + DE +M++ +++
Sbjct: 364 QFDEMIRFGIEPNDITFLSVLTAC-SHARLLDEGKHYFGLMRKYNIE 409
>gi|297819724|ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323583|gb|EFH54004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 764
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 208/626 (33%), Positives = 340/626 (54%), Gaps = 7/626 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ-IGMPEVALNYFRLMVCCVL 72
N+L+ MYV+ + A+KLFD+MPERNV+S++AL S +S+ + A + M L
Sbjct: 49 NNLISMYVRCGSLEQARKLFDKMPERNVVSYNALYSAYSRNLDYASYAFSLINQMASESL 108
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+PN T+ V C D G +H ++ + G N V ++ MY CG L SA+
Sbjct: 109 KPNSSTFTSLVQVCTVLEDVLMGSLLHSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 168
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
+F+ ++++W +++ + + GL +F SGV ++F+ + VL AC+ LG+
Sbjct: 169 IFECVNGGDAVAWNTMIVGIFRNDKIEDGLMLFRSMLMSGVDPTQFTYSMVLNACSKLGS 228
Query: 193 LK--VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
+ VG IH+ + + D V L+++Y C + A VF I P+L +W+++I
Sbjct: 229 YRYSVGKLIHARMIVSDILADLPVENALLDMYCSCGDMKEAFYVFGKIHNPNLVSWNSII 288
Query: 251 GGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
G ++ G +AI ++ ++ S P E TFS + A A+ ++ I G+ LH + K+G+
Sbjct: 289 SGCSENGFGEQAILMYRRLLRISTPRPDEYTFSAAIPATAEPEKFIHGKLLHGQVTKLGY 348
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
FV T+L Y K E + K F + E DVV W +I G + A++L +
Sbjct: 349 ERSVFVGTTLLSMYFKNGEAESAQKVFGVITERDVVLWTEMIVGESRVGNSECAVQLFIE 408
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M E + + ++ S++L SD+ + G+ H +K GFD+ + + ALVDMY K G+
Sbjct: 409 MYREKNRTDGFSLSSVLGACSDMAMLRQGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGK 468
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
A +F +S+ +L WN+ML Y+QHG+ +A + + EN P+ T++ +L+A
Sbjct: 469 YETAESIFSLVSNPDLKCWNSMLGAYSQHGMVEKAQSFFEQILENGFTPDAVTYLSLLAA 528
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C H G +EG +N M ++ GI+ H + +V L + G A E IK SP E N+
Sbjct: 529 CSHKGSTQEGKFLWNQM-KEQGITAGFKHYSCMVSLVSKAGLLGEALELIKQSPPENNQA 587
Query: 550 -VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
+WR LLS C ++L +G YAA++IL DPEDT+ HI+LSN+YA W + A++R+ +
Sbjct: 588 ELWRTLLSACVNARNLQIGLYAADQILKLDPEDTATHILLSNLYAVNGRWKDVAEMRRKI 647
Query: 609 KEKSLKKDTGCSWTEL-QNKMHYFST 633
+ + KD G SW E+ N H FS+
Sbjct: 648 RGLASAKDPGLSWIEVNNNNTHVFSS 673
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 231/467 (49%), Gaps = 8/467 (1%)
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHV-HGLKIFLLSRKSG 172
+N LI+MY +CG L A+ +FD ERN +S+ +L S+Y + ++ + +
Sbjct: 48 NNNLISMYVRCGSLEQARKLFDKMPERNVVSYNALYSAYSRNLDYASYAFSLINQMASES 107
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+ + + S++ C VL ++ +G +HS + K + V ++ +Y+ C L+ A
Sbjct: 108 LKPNSSTFTSLVQVCTVLEDVLMGSLLHSQIIKLGYSDNVVVQTSVLGMYSSCGDLESAR 167
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA---FA 289
R+F + D AW+ +I G + K + + LF M SG+ P++ T+S VL A
Sbjct: 168 RIFECVNGGDAVAWNTMIVGIFRNDKIEDGLMLFRSMLMSGVDPTQFTYSMVLNACSKLG 227
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ ++ G+ +H+ +I + V N +LD Y C ++E+ F ++ ++VSWN+
Sbjct: 228 SYRYSV-GKLIHARMIVSDILADLPVENALLDMYCSCGDMKEAFYVFGKIHNPNLVSWNS 286
Query: 350 LIAGHLASCHYGEAIELLKDML-FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
+I+G + +AI + + +L P+ YT+S + +++ GK H + K
Sbjct: 287 IISGCSENGFGEQAILMYRRLLRISTPRPDEYTFSAAIPATAEPEKFIHGKLLHGQVTKL 346
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
G++ +V +G+ L+ MY K G A+KVF ++ +++V W M+VG ++ G A++++
Sbjct: 347 GYERSVFVGTTLLSMYFKNGEAESAQKVFGVITERDVVLWTEMIVGESRVGNSECAVQLF 406
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
M K + + + VL AC + ++ +G F+S+ G M ++V ++
Sbjct: 407 IEMYREKNRTDGFSLSSVLGACSDMAMLRQG-QVFHSLAIKTGFDNVMSVSGALVDMYGK 465
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL 575
G+ A E I S P+ W +L H + + E+IL
Sbjct: 466 NGKYETA-ESIFSLVSNPDLKCWNSMLGAYSQHGMVEKAQSFFEQIL 511
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 216/460 (46%), Gaps = 11/460 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ NV+ +L MY + A+++F+ + + ++W+ +I G + E
Sbjct: 138 IIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFECVNGGDAVAWNTMIVGIFRNDKIEDG 197
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDAR--SGKEIHGRMYRSGLELNSHVSNCLI 118
L FR M+ ++P +TY ++AC+ G R GK IH RM S + + V N L+
Sbjct: 198 LMLFRSMLMSGVDPTQFTYSMVLNACSKLGSYRYSVGKLIHARMIVSDILADLPVENALL 257
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK----SGVA 174
+MY CG + A +VF N +SW S++S C E+ G + L+ R+ S
Sbjct: 258 DMYCSCGDMKEAFYVFGKIHNPNLVSWNSIISG---CSENGFGEQAILMYRRLLRISTPR 314
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
E++ ++ + A A G +H V K E FV L+++Y K + + A +V
Sbjct: 315 PDEYTFSAAIPATAEPEKFIHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNGEAESAQKV 374
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F I D+ W+ +I G +++G + A+ LF++M+ + S VLGA +D+
Sbjct: 375 FGVITERDVVLWTEMIVGESRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGACSDMAML 434
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G+ HSL IK GF + V+ ++D Y K E + F + D+ WN+++ +
Sbjct: 435 RQGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLKCWNSMLGAY 494
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+A + +L G P+ TY ++L S + + GK + + G +
Sbjct: 495 SQHGMVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMKEQGITAGF 554
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS--WNTML 452
S +V + +K G L +A ++ +N + W T+L
Sbjct: 555 KHYSCMVSLVSKAGLLGEALELIKQSPPENNQAELWRTLL 594
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +GF + L+ MY K + A+ +F + ++ W++++ +SQ GM E A
Sbjct: 445 IKTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLKCWNSMLGAYSQHGMVEKAQ 504
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
++F ++ P+ TY+ ++AC+ +G + GK + +M G+ +C++++
Sbjct: 505 SFFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMKEQGITAGFKHYSCMVSLV 564
Query: 122 GKCGLLSSAQFVFDASLERNSIS--WVSLLSS 151
K GLL A + S N+ + W +LLS+
Sbjct: 565 SKAGLLGEALELIKQSPPENNQAELWRTLLSA 596
>gi|125555425|gb|EAZ01031.1| hypothetical protein OsI_23065 [Oryza sativa Indica Group]
Length = 671
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 201/634 (31%), Positives = 345/634 (54%), Gaps = 14/634 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC--V 71
N+LLL Y + DA+ +FDEMP RNV+SWS LI S++G+ AL+ F M+
Sbjct: 41 NNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRLGVLGDALSLFAGMLRGGER 100
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
PN +T V+ CA DA +G+++H + G++ + V+ L++MY KCG + S+
Sbjct: 101 DRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSW 160
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV-----AISEFSCASVLGA 186
F + +R+ +SW S+++ G+ + +L +K V + FSC +L
Sbjct: 161 RAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSC--ILKV 218
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
V L G Q+H + K E D + L+ +Y +C +D +R+ I+ D +
Sbjct: 219 FDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRIR-HDAFSR 277
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
++L+ YA+ G EA+ +F M + + + +L + + + +++H +K
Sbjct: 278 TSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALK 337
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
F T + N ++ Y KC + S F+ ++ D +SW AL+ ++ + EA+
Sbjct: 338 NFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFF 397
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
++M+ +G +++ +++L S ++ G Q H +VK G D + + +ALV MYAK
Sbjct: 398 FREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAK 457
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + A K+F+ ++ ++SWN ++ ++QHG A++++ MMQE + P+D TF+G+
Sbjct: 458 CGVVQVALKIFNSTRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGL 517
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LS+C +GLV EG YF M + + P+M+H +V LFA G+ A +FI + P +P
Sbjct: 518 LSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQP 577
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+++VW LL+ C+ H +L LGR AA+KIL PED S +I+LS+++A +MWDE A+ R
Sbjct: 578 DQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRT 637
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQ 640
++ + L+KD G S + Q FS F Q
Sbjct: 638 LLDFQQLRKDVGSSQLDSQG----FSDDIFNALQ 667
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 228/477 (47%), Gaps = 12/477 (2%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
+ +HG + G ++++ N L+ Y G L+ A+ VFD RN +SW L+ + +
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRL 81
Query: 156 GEHVHGLKIFLLSRKSGV--AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
G L +F + G + F+ A+++ CA + G Q+H+ K ++ D+
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG---GYAQLGKACEAIDLFVKMF 270
VA L+++YAKC ++ + R F + +W+++I + G AI LF KM
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201
Query: 271 SSGLMPSEVTFSYVLGAFADVKETI-GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
+ P+ TFS +L F DV E + G+Q+H ++KMG + +L Y +C +
Sbjct: 202 VLKVWPTNATFSCILKVF-DVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGM 260
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP-NLYTYSNILNI 388
+E + + HD S +L+ + + EA+ + +DML GH P + +++L +
Sbjct: 261 DEITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLM-GHMPIDQSAITSLLQV 318
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
S + + K+ HC +K F + ++ +A+V +Y KCG + + VF+ L +K+ +SW
Sbjct: 319 CSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISW 378
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+L Y Q+ L +EAL + M ++ + VL AC + GW + +++
Sbjct: 379 TALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVK 438
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
G+ ++V ++A G + A + S+ + W L++ H + V
Sbjct: 439 -LGVDDDTSVENALVTMYAKCGVVQVALKIFNSTR-NRGIISWNALITSFSQHGNEV 493
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 159/333 (47%), Gaps = 23/333 (6%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F + + N ++ +Y K I ++ +F+ + ++ ISW+AL++ + Q + + AL +FR
Sbjct: 340 FRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFR 399
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
MV LE + + + AC++ G +IH R+ + G++ ++ V N L+ MY KCG
Sbjct: 400 EMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCG 459
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
++ A +F+++ R ISW +L++S+ Q G V +++F + ++ V +++ +L
Sbjct: 460 VVQVALKIFNSTRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLS 519
Query: 186 ACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDL 243
+C+ +G + G + + K LE +++L+A+ + A + + PD
Sbjct: 520 SCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQ 579
Query: 244 TAWSALIG-----GYAQLGKACEAIDLFVK------------MFSSGLMPSEVTFSYVLG 286
W AL+ G LG+ L +K + +S M E + L
Sbjct: 580 LVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRTLL 639
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
F +++ +G QL S GFS F A V
Sbjct: 640 DFQQLRKDVGSSQLDS----QGFSDDIFNALQV 668
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 7/159 (4%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G + N L+ MY K + A K+F+ R +ISW+ALI+ FSQ G A+ F
Sbjct: 440 GVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALITSFSQHGNEVAAIQLF 499
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM-YRSGLELNSHVSNCLINMYGK 123
+M ++ P+ YT+VG +S+C+ G G E +M + LE C+++++ +
Sbjct: 500 DMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFAR 559
Query: 124 CGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHG 161
G S A DA + + + W +LL+S C+ VHG
Sbjct: 560 AGRFSDAMKFIDAMPCQPDQLVWEALLAS-CR----VHG 593
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 205/669 (30%), Positives = 350/669 (52%), Gaps = 7/669 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+P+V T L+ Y++F + LFD M RN++SW+A+ISG+ +G AL F
Sbjct: 189 NPHVAT--ALIGFYLRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQ 245
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ ++ + T + AV ACA G + GK+IH + + ++ N L+NMY G
Sbjct: 246 MLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGS 305
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L S+ +F++ R++ W S++S+Y G H + +F+ + GV E + +L
Sbjct: 306 LESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSM 365
Query: 187 CAVLGN-LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
C L + L G +H+ V K + D + L+++Y + ++ ++F ++ D+ +
Sbjct: 366 CEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIIS 425
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ +I A+ +A +LF +M S + P+ T +L A DV GR +H ++
Sbjct: 426 WNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVM 485
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K + + D Y C + F+ + D++SWNA+IA ++ + +A+
Sbjct: 486 KHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALL 545
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS--NVVIGSALVDM 423
L M+ E PN T N+L+ + + + G+ H + + GF ++ + +A + M
Sbjct: 546 LFHRMISEAE-PNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITM 604
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
YA+CG L A +F L +N++SWN M+ GY +G G +A+ +S M E+ +PN TF
Sbjct: 605 YARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTF 664
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ VLSAC H G +E G F+SM++D ++P + H + +V L A G A EFI S P
Sbjct: 665 VSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMP 724
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
IEP+ VWR LLS C+ + D + EK+ +P + +++LSNVYA A +W E +
Sbjct: 725 IEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRR 784
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+R +KEK L+K G SW ++N++H FS + Q ++ ++ L + + GY PD
Sbjct: 785 IRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPD 844
Query: 664 PIYSSHFEE 672
+ H E+
Sbjct: 845 LRWVFHEED 853
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 160/545 (29%), Positives = 278/545 (51%), Gaps = 14/545 (2%)
Query: 20 YVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTY 79
Y K + DA+ +FD M +R+V+ W+A++ G+ G E A+ R M L PN T
Sbjct: 98 YCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTM 157
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
V + AC + R G+ +HG R+G+ + N HV+ LI Y + + +FD +
Sbjct: 158 VALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLFDLMV 216
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL---GACAVLGNLKV 195
RN +SW +++S Y G++ L++F+ + V +F C ++L ACA LG+LK+
Sbjct: 217 VRNIVSWNAMISGYYDVGDYFKALELFV---QMLVDEVKFDCVTMLVAVQACAELGSLKL 273
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G QIH L K D ++ L+N+Y+ L+ + ++F ++ D W+++I YA
Sbjct: 274 GKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAA 333
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE-TIGGRQLHSLIIKMGFSSFTF 314
G EA+DLF++M S G+ E T +L ++ + G+ LH+ +IK G
Sbjct: 334 FGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDAS 393
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
+ N +L Y++ +E K FD M D++SWN +I + +A EL + M
Sbjct: 394 LGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESE 453
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
PN YT +IL D+ +++G+ H ++K + N + +AL DMY CG AR
Sbjct: 454 IKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATAR 513
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+F+ ++L+SWN M+ Y ++ +AL ++ M ++ +PN T I VLS+ H+
Sbjct: 514 DLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMI-SEAEPNSVTIINVLSSFTHLA 572
Query: 495 LVEEGWHYFNSMIRDHGISPRMD--HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
+ +G ++ + G S +D + + ++A G + A K+ P + N + W
Sbjct: 573 TLPQG-QSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP-KRNIISWN 630
Query: 553 CLLSG 557
+++G
Sbjct: 631 AMIAG 635
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/529 (24%), Positives = 260/529 (49%), Gaps = 9/529 (1%)
Query: 44 WSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY 103
W+++I + + + L+ + M + PN T + ACA++ GK IH +
Sbjct: 21 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80
Query: 104 RSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLK 163
+ L + V +++ Y KCG + A+ VFDA +R+ + W +++ Y G + +
Sbjct: 81 GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 140
Query: 164 IFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL-EFDKFVAMGLINLY 222
+ + + + + ++L AC L++G +H + + + + VA LI Y
Sbjct: 141 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY 200
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
+ + + + +F + + ++ +W+A+I GY +G +A++LFV+M + VT
Sbjct: 201 LRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTML 259
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
+ A A++ G+Q+H L IK F ++ N +L+ YS LE S + F+ +
Sbjct: 260 VAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNR 319
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA-IEWGKQT 401
D WN++I+ + A + EA++L M EG + T +L++ ++ + + GK
Sbjct: 320 DAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSL 379
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H ++K G + +G+AL+ MY + + +K+FD + +++SWNTM++ A++ L
Sbjct: 380 HAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLR 439
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
+A E++ M+E++IKPN T I +L+AC + ++ G + + H I +
Sbjct: 440 AQACELFERMRESEIKPNSYTIISILAACEDVTCLDFG-RSIHGYVMKHSIEINQPLRTA 498
Query: 522 VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS----GCKTHKDLVL 566
+ ++ G A + + P + + + W +++ + HK L+L
Sbjct: 499 LADMYMNCGDEATARDLFEGCP-DRDLISWNAMIASYVKNNQAHKALLL 546
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 235/478 (49%), Gaps = 8/478 (1%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F ++ N LL MY + + +LF+ +P R+ W+++IS ++ G E A++ F
Sbjct: 286 FVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFI 345
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDA-RSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M ++ + T V +S C GK +H + +SG+ +++ + N L++MY +
Sbjct: 346 RMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTEL 405
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ S Q +FD + ISW +++ + + ++F R+S + + ++ S+L
Sbjct: 406 NCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISIL 465
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC + L G IH V K ++E ++ + L ++Y C A +F DL
Sbjct: 466 AACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLI 525
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+A+I Y + +A +A+ LF +M S P+ VT VL +F + G+ LH+ +
Sbjct: 526 SWNAMIASYVKNNQAHKALLLFHRMISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAYV 584
Query: 305 IKMGFSSF--TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
+ GFS +AN + Y++C L+ + F + + +++SWNA+IAG+ + +
Sbjct: 585 TRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSD 644
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALV 421
A+ ML +G PN T+ ++L+ S IE G Q H + +V S +V
Sbjct: 645 AMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIV 704
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
D+ A+ G +++AR+ D + + S W +L + ++A I+ + +K++P
Sbjct: 705 DLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKL--DKLEP 760
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 176/368 (47%), Gaps = 10/368 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + N LL MY + + + QK+FD M ++ISW+ +I ++ + A
Sbjct: 383 VIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQA 442
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M ++PN YT + ++AC G+ IHG + + +E+N + L +M
Sbjct: 443 CELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADM 502
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y CG ++A+ +F+ +R+ ISW ++++SY + H + S + +
Sbjct: 503 YMNCGDEATARDLFEGCPDRDLISWNAMIASYVK-NNQAHKALLLFHRMISEAEPNSVTI 561
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFK--CALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+VL + L L G +H+ V + +L D +A I +YA+C L A +F +
Sbjct: 562 INVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTL 621
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
++ +W+A+I GY G+ +A+ F +M G P+ VTF VL A + G
Sbjct: 622 PKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGL 681
Query: 299 QL-HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLA 356
QL HS++ + + ++D ++ ++E+ + D M E D W AL L+
Sbjct: 682 QLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRAL----LS 737
Query: 357 SCH-YGEA 363
SC Y +A
Sbjct: 738 SCRAYSDA 745
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 171/363 (47%), Gaps = 18/363 (4%)
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ IQ+ D W+++I A L + + +M S G++P+ T VL A A
Sbjct: 11 TKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVE 70
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+ +H I V V+DFY KC +E++ FD M + DVV WNA++ G++
Sbjct: 71 RGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYV 130
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG-FDSNV 414
Y EA+ L+++M E PN T +L + G+ H ++ G FDSN
Sbjct: 131 GWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNP 190
Query: 415 VIGSALVDMYAKCGRLNDARK---VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+ +AL+ Y + D R +FD + +N+VSWN M+ GY G +ALE++ M
Sbjct: 191 HVATALIGFYLRF----DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQM 246
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
+++K + T + + AC +G ++ G I+ + + + +++++++ G
Sbjct: 247 LVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVED-LYILNALLNMYSNNGS 305
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLS-----GCKTHKDLVLGRYAAEKILSTDPEDTSAHI 586
+++ +S P + +W ++S GC + R +E + ++ + I
Sbjct: 306 LESSHQLFESVP-NRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGV---KKDERTVVI 361
Query: 587 MLS 589
MLS
Sbjct: 362 MLS 364
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 205/672 (30%), Positives = 357/672 (53%), Gaps = 11/672 (1%)
Query: 1 MITSGFHPNVITY-NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV 59
+I SG + ++ N L+ M+ + + +A ++F+ M ER+ ISW+++I+ + G E
Sbjct: 376 VIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEE 435
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+L +F M + +Y T + AC S + G+ +HG + +SGLE N V N L++
Sbjct: 436 SLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLS 495
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY + G A+ VF R+ ISW S+++S+ + G++ H + + + K+ A++ +
Sbjct: 496 MYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVT 555
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ L AC L LK+ +H+ V A+ + + L+ +Y K +D A +V +
Sbjct: 556 FTTALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP 612
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GR 298
D+ W+ALIGG+A I F M GL+ + +T +LG + G
Sbjct: 613 ERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGM 672
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H+ I+ GF T+V ++++ Y++C L S FD + + +WNA+ + A+
Sbjct: 673 PIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFS---ANA 729
Query: 359 HYG---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
HYG EA++ + M +G + +++S L ++ ++ G+Q H I+K GF+ +
Sbjct: 730 HYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEY 789
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ +A +DMY KCG ++D ++ ++ SWN ++ A+HG R+A E + M +
Sbjct: 790 VLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLG 849
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+KP+ TF+ +LSAC H GLV+EG YF+SM + G+ ++H ++ L G+ A
Sbjct: 850 LKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEA 909
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
FI P+ PN+ VWR LL+ CK H +L LGR AA+++ + D SA+++ SNV A
Sbjct: 910 EGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCAST 969
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
W + VRK M+ +SLKK CSW +L+NK+ F Q ++ + +L
Sbjct: 970 QRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMT 1029
Query: 656 FDGGYVPDPIYS 667
+ G++PD Y+
Sbjct: 1030 REEGHMPDTSYA 1041
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 247/485 (50%), Gaps = 5/485 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N N L+ MY KF I AQ +FD+M +RN SW+ +ISGF ++G A+ +F M
Sbjct: 181 NTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMF 240
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSG-KEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
+ P+ Y V+AC G G ++IHG + + GL N V L++ YG G +
Sbjct: 241 ENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSV 300
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
S A +F+ E N +SW SL+ Y G L I+ R +G+ + + A+V+ C
Sbjct: 301 SEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTC 360
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKF-VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
+ G+ +G QI V K L+ VA LI+++ + ++ ASRVF+N+Q D +W
Sbjct: 361 GMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISW 420
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+++I A G+ E++ F M + +T S +L A + GR LH LI K
Sbjct: 421 NSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITK 480
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G S V N++L Y++ E++ F M D++SWN+++A H+ Y AI L
Sbjct: 481 SGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILL 540
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
L +ML N T++ L+ ++ + K H ++ N++IG+ LV MY K
Sbjct: 541 LVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMYGK 597
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
G +++A+KV + +++V+WN ++ G+A ++ +++M+ + N T + +
Sbjct: 598 FGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNL 657
Query: 487 LSACV 491
L C+
Sbjct: 658 LGTCM 662
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 276/564 (48%), Gaps = 9/564 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G NV LL Y +++A KLF+E+ E N++SW++L+ ++ G +
Sbjct: 275 VVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEV 334
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLIN 119
LN +R + L T + C GD G +I G + +SGL+ +S V+N LI+
Sbjct: 335 LNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLIS 394
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
M+G + A VF+ ER++ISW S++++ G L F R++ +
Sbjct: 395 MFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYIT 454
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+++L AC +LK G +H L+ K LE + V L+++YA+ + A VF +
Sbjct: 455 ISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMP 514
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
DL +W++++ + + GK AI L V+M + + VTF+ L A ++++ +
Sbjct: 515 ARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KI 571
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ +I + NT++ Y K L++E+ K M E DVV+WNALI GH
Sbjct: 572 VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKD 631
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILN--ISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
I+ M EG N T N+L +S D ++ G H IV GF+ + +
Sbjct: 632 PNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDY-LLKHGMPIHAHIVVAGFELDTYVQ 690
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
S+L+ MYA+CG LN + +FD L++KN +WN + A +G G EAL+ + M+ + +
Sbjct: 691 SSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVD 750
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
+ +F L+ ++ +++EG +S I G + + + ++ G+ +
Sbjct: 751 LDQFSFSVALATIGNLTVLDEG-QQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFR 809
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTH 561
+ I +K W L+S H
Sbjct: 810 ILPIPKIR-SKRSWNILISALARH 832
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 238/477 (49%), Gaps = 19/477 (3%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
GK +H + ++ N+ +N L+NMY K G + AQ VFD +RN SW +++S + +
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM-QIHSLVFKCALEFDKF 213
G + ++ F ++GV S + AS++ AC G + G QIH V KC L + F
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
V L++ Y + A+++F I+ P++ +W++L+ YA G E ++++ + +G
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF-SSFTFVANTVLDFYSKCELLEES 332
L+ + T + V+ + G Q+ +IK G +S VAN+++ + + +EE+
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
+ F+ M E D +SWN++I AS H G E L + + ++ + IS+ +
Sbjct: 406 SRVFNNMQERDTISWNSIIT---ASAHNGRFEESLGHFFW---MRRTHPKTDYITISALL 459
Query: 393 PA------IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
PA ++WG+ H I K G +SNV + ++L+ MYA+ G DA VF + +++L+
Sbjct: 460 PACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLI 519
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
SWN+M+ + + G A+ + M + + N TF LSAC ++ E ++
Sbjct: 520 SWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNL----EKLKIVHAF 575
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+ + + ++V ++ G A + K P E + V W L+ G KD
Sbjct: 576 VIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-ERDVVTWNALIGGHADDKD 631
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 177/368 (48%), Gaps = 12/368 (3%)
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
VG +H+L K ++ + F L+N+Y+K + A VF + + +W+ +I G+
Sbjct: 165 VGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE-----TIGGRQLHSLIIKMGF 309
++G +A+ F MF +G+ PS SYV+ + + T G RQ+H ++K G
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPS----SYVIASMVTACDRSGCMTEGARQIHGYVVKCGL 280
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
S FV ++L FY + E+ K F+E++E ++VSW +L+ + + H E + + +
Sbjct: 281 MSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRH 340
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD-SNVVIGSALVDMYAKCG 428
+ G T + ++ G Q ++K G D S+V + ++L+ M+
Sbjct: 341 LRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYD 400
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ +A +VF+++ ++ +SWN+++ A +G E+L + M+ K + T +L
Sbjct: 401 SVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLP 460
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC ++ G + +I G+ + S++ ++A G + A + P +
Sbjct: 461 ACGSAQHLKWG-RGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPAR-DL 518
Query: 549 VVWRCLLS 556
+ W +++
Sbjct: 519 ISWNSMMA 526
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 134/276 (48%), Gaps = 2/276 (0%)
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
++ F+++ E G+ LH+L +K TF NT+++ YSK ++ + FD+M +
Sbjct: 152 FLQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDR 211
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI-EWGKQT 401
+ SWN +I+G + Y +A++ M G P+ Y ++++ + E +Q
Sbjct: 212 NDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQI 271
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H +VK G SNV +G++L+ Y G +++A K+F+ + N+VSW +++V YA +G
Sbjct: 272 HGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHT 331
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
+E L IY ++ N + NT V+ C G G+ +I+ + + S
Sbjct: 332 KEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANS 391
Query: 522 VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++ +F A + E + + W +++
Sbjct: 392 LISMFGNYDSVEEASRVFNNMQ-ERDTISWNSIITA 426
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 200/662 (30%), Positives = 356/662 (53%), Gaps = 5/662 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEV 59
++T G +V+ L+ +Y A+ +F+ R +V W++L+SG+S+ M
Sbjct: 30 ILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHD 89
Query: 60 ALNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
L F RL+ C + P+ +T+ + A + G G+ IH + +SG + V++ L+
Sbjct: 90 TLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLV 149
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY K L ++ VFD ER+ SW +++S + Q GE L++F SG +
Sbjct: 150 GMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSV 209
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S + AC+ L L+ G +IH K E D++V L+++Y KC+ L++A VF +
Sbjct: 210 SLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKM 269
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
L AW+++I GY G + +++ +M G PS+ T + +L A + + + G+
Sbjct: 270 PRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK 329
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H +I+ ++ +V +++D Y KC + F + + SWN +I+ +++
Sbjct: 330 FIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVG 389
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
++ +A+E+ M+ G P++ T++++L S + A+E GKQ H I + +++ ++ S
Sbjct: 390 NWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLS 449
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMY+KCG +A ++F+ + K++VSW M+ Y HG REAL + MQ+ +KP
Sbjct: 450 ALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKP 509
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ T + VLSAC H GL++EG +F+ M +GI P ++H + ++ + G+ AYE
Sbjct: 510 DGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEI 569
Query: 539 IKSSP-IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
I+ +P N + L S C H + LG A ++ P+D S +++L N+YA
Sbjct: 570 IQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGES 629
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKM-HYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
WD +VR MKE L+K GCSW E+ +K+ H+F+ R + + +++E + LS H+
Sbjct: 630 WDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDR-SHLRAENVYECLALLSGHME 688
Query: 657 DG 658
G
Sbjct: 689 SG 690
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 237/471 (50%), Gaps = 4/471 (0%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSIS-WVSLLSS 151
R K +H R+ GL + + LIN+Y C SA+ VF+ R+ + W SL+S
Sbjct: 21 RRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSG 80
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISE-FSCASVLGACAVLGNLKVGMQIHSLVFKCALEF 210
Y + L++F + + + F+ +V+ A LG +G IH+LV K
Sbjct: 81 YSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVC 140
Query: 211 DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF 270
D VA L+ +YAK + + +VF + D+ +W+ +I + Q G+A +A++LF +M
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
SSG P+ V+ + + A + + G+++H +K GF +V + ++D Y KC+ LE
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
+ + F +M +V+WN++I G++A +E+L M+ EG P+ T ++IL S
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACS 320
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
+ GK H +++ ++++ + +L+D+Y KCG N A VF SWN
Sbjct: 321 RSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNV 380
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
M+ Y G +A+E+Y M +KP+ TF VL AC + +E+G S I +
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS-ISES 439
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ +++++ +++ G + A+ S P + + V W ++S +H
Sbjct: 440 RLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSH 489
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 202/666 (30%), Positives = 343/666 (51%), Gaps = 5/666 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + N L+ M+ ++ A +F+++ ER+ ISW+++++ ++Q G E +
Sbjct: 287 VIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEES 346
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F LM E N T +S + G+ IHG + + G + V N L+ M
Sbjct: 347 SRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRM 406
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G A VF ++ ISW SL++S+ G + L I ++G +++ +
Sbjct: 407 YAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTF 466
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S L AC G +H LV L ++ + L+++Y K + + RV +
Sbjct: 467 TSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPR 526
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF---ADVKETIGG 297
D+ AW+ALIGGYA+ +A+ F + G+ + +T VL A D+ E G
Sbjct: 527 RDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLER--G 584
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+ LH+ I+ GF S V N+++ Y+KC L S F+ +D +++WNA++A +
Sbjct: 585 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHH 644
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
H E ++L+ M G + +++S L+ ++ + +E G+Q H VK GF+ + I
Sbjct: 645 GHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIF 704
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+A DMY+KCG + + K+ +++L SWN ++ +HG E E + M E IK
Sbjct: 705 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIK 764
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P TF+ +L+AC H GLV++G Y++ + +D G+ P ++H V+ L G+ A
Sbjct: 765 PGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAET 824
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FI P++PN +VWR LL+ CK H+DL GR AAE + +PED S ++ SN++A
Sbjct: 825 FISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGR 884
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
W++ VRK M K++KK CSW +L++K+ F Q ++++ + + + +
Sbjct: 885 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 944
Query: 658 GGYVPD 663
GYV D
Sbjct: 945 SGYVAD 950
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/493 (31%), Positives = 264/493 (53%), Gaps = 2/493 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V+ N L+ MY KF R+ A+ LFD+MP RN +SW+ ++SG ++G+ + +F+ M
Sbjct: 92 SVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMC 151
Query: 69 CCVLEPNYYTYVGAVSACASRGDA-RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
++P+ + V+AC G R G ++HG + +SGL + +VS ++++YG GL+
Sbjct: 152 DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLV 211
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
S ++ VF+ +RN +SW SL+ Y GE + I+ R GV +E S + V+ +C
Sbjct: 212 SCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSC 271
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+L + +G QI V K LE V LI+++ +D A+ +F+ I D +W+
Sbjct: 272 GLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWN 331
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+++ YAQ G E+ +F M + T S +L DV GR +H L++KM
Sbjct: 332 SIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKM 391
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
GF S V NT+L Y+ EE+ F +M D++SWN+L+A + +A+ +L
Sbjct: 392 GFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGIL 451
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M+ G N T+++ L + G+ H +V G N +IG+ALV MY K
Sbjct: 452 CSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKI 511
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G ++ +R+V + +++V+WN ++ GYA++ +AL + ++ + N T + VL
Sbjct: 512 GGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVL 571
Query: 488 SACVHIG-LVEEG 499
SAC+ G L+E G
Sbjct: 572 SACLVPGDLLERG 584
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 267/499 (53%), Gaps = 5/499 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG +V +L +Y + ++ ++K+F+EMP+RNV+SW++L+ G+S G PE ++
Sbjct: 189 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDI 248
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
++ M +E N + +S+C D G++I G++ +SGLE V N LI+M+G
Sbjct: 249 YKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGN 308
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
G + A ++F+ ER++ISW S++++Y Q G +IF L R+ ++ + +++
Sbjct: 309 MGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTL 368
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L + + K G IH LV K + V L+ +YA + + A VF + DL
Sbjct: 369 LSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDL 428
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W++L+ + G++ +A+ + M +G + VTF+ L A + GR LH L
Sbjct: 429 ISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGL 488
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
++ G + N ++ Y K + S + +M DVV+WNALI G+ + +A
Sbjct: 489 VVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKA 548
Query: 364 IELLKDMLFEGHCPNLYTYSNILN---ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ + + EG N T ++L+ + D+ +E GK H IV GF+S+ + ++L
Sbjct: 549 LAAFQTLRVEGVSANYITVVSVLSACLVPGDL--LERGKPLHAYIVSAGFESDEHVKNSL 606
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MYAKCG L+ ++ +F+ L ++++++WN +L A HG G E L++ S M+ + +
Sbjct: 607 ITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQ 666
Query: 481 NTFIGVLSACVHIGLVEEG 499
+F LSA + ++EEG
Sbjct: 667 FSFSEGLSAAAKLAVLEEG 685
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 236/471 (50%), Gaps = 3/471 (0%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
+G+ +H + + L+ +N LINMY K G + A+++FD RN +SW +++S
Sbjct: 76 TGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIV 135
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL-KVGMQIHSLVFKCALEFDK 212
+ G ++ G++ F G+ S F AS++ AC G++ + G+Q+H V K L D
Sbjct: 136 RVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 195
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
+V+ +++LY + + +VF + ++ +W++L+ GY+ G+ E ID++ M
Sbjct: 196 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGE 255
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G+ +E + S V+ + +K+ GRQ+ +IK G S V N+++ + ++ +
Sbjct: 256 GVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYA 315
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
F+++ E D +SWN+++A + + H E+ + M N T S +L++ D+
Sbjct: 316 NYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDV 375
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+WG+ H +VK GFDS V + + L+ MYA GR +A VF + +K+L+SWN+++
Sbjct: 376 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLM 435
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
+ G +AL I M N TF L+AC ++G + ++ G+
Sbjct: 436 ASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKG-RILHGLVVVSGL 494
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
++V ++ G + + P + V W L+ G ++D
Sbjct: 495 FDNQIIGNALVSMYGKIGGMSTSRRVLLQMP-RRDVVAWNALIGGYAENED 544
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 13/174 (7%)
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
S I G+ H VK +V+ + L++MY K GR+ AR +FD + +N VSWN
Sbjct: 69 SQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWN 128
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG-LVEEG--WHYF--- 503
TM+ G + GL E +E + M + IKP+ +++AC G + EG H F
Sbjct: 129 TMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 188
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ ++ D +S + H+ V L +C +R+ +E + + N V W L+ G
Sbjct: 189 SGLLSDVYVSTAILHLYGVYGLVSC---SRKVFEEMP----DRNVVSWTSLMVG 235
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 186/590 (31%), Positives = 316/590 (53%), Gaps = 50/590 (8%)
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+N K G L+ A +FD +N ++W S++S + G L +F +SGVA ++
Sbjct: 55 LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPND 114
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
F+C + L ACA LG L+ G Q+HSL + D ++ LI +Y++C L A VF
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK----- 292
+ PD+ +++LI + + G+ A + ++M GL P+E T + +L A V
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIH 234
Query: 293 ----ETIG-----------------------------------------GRQLHSLIIKM 307
+ IG GRQLH IK
Sbjct: 235 GYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKH 294
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
+ V+N +L Y + L+EE ++++ D+VSW I+ + + +AI LL
Sbjct: 295 DLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALL 354
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M EG PN Y +S++L+ +D+ +++ G Q HC +K G DS + G+AL++MY+KC
Sbjct: 355 CQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKC 414
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G++ AR FD + + ++ SWN+++ G+AQHG +ALE++S M+ N IKP+D+TF+GVL
Sbjct: 415 GQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVL 474
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
C H G+VEEG +F MI + +P H A ++ + G+ A I P EP+
Sbjct: 475 MGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPD 534
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
++W+ LL+ CK H++L +G+ AA++++ D+++++++SN+YA W++ KVR+
Sbjct: 535 ALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRR 594
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
M E +KKD GCSW E+ N++H F++ + +++++ +L + D
Sbjct: 595 MDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 644
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 149/506 (29%), Positives = 236/506 (46%), Gaps = 58/506 (11%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P+V+ L VK R+ DA LFD MP +NV++W++++SG ++ G PE AL F M
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADM 105
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
V + PN + A+ ACA G R+G+++H R+G ++ + +CLI MY +CG L
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGE------------------------------ 157
+A+ VFD + + + SL+S++C+ GE
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC 225
Query: 158 ------HVHGLKIFLL-----------------SRKSGVAISEFSCASVLGACAVLGNLK 194
+HG I + SR GV +EF+ + VLGAC G++
Sbjct: 226 PRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGAC---GSIG 282
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
+G Q+H K L D V+ L+++Y + ++ + + I+ PDL +W+ I
Sbjct: 283 LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANF 342
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q G +AI L +M S G P+ FS VL + ADV G Q H L +K+G S
Sbjct: 343 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEIC 402
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
N +++ YSKC + + FD M HDV SWN+LI GH +A+E+ M G
Sbjct: 403 TGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG 462
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQ-THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
P+ T+ +L + +E G+ I + F + ++DM + GR ++A
Sbjct: 463 IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEA 522
Query: 434 -RKVFDHLSSKNLVSWNTMLVGYAQH 458
R + D + + W T+L H
Sbjct: 523 LRMINDMPFEPDALIWKTLLASCKLH 548
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 180/414 (43%), Gaps = 64/414 (15%)
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
CA D + +N K +L A +F + ++ AW++++ G + G+ A+ +
Sbjct: 42 CAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAM 101
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F M SG+ P++ + L A AD+ G Q+HSL ++ GF+ ++ + +++ YS+
Sbjct: 102 FADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSR 161
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE---AIELLKDMLFEGHCPNLYTY 382
C L + + FD MD DVV + +LI+ A C GE A E L ML +G PN +T
Sbjct: 162 CGSLPAAKEVFDRMDSPDVVGYTSLIS---AFCRNGEFELAAEALIQMLKQGLKPNEHTM 218
Query: 383 SNILNISSDI-------------------------------------------------- 392
+ IL +
Sbjct: 219 TTILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGAC 278
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+I G+Q HC +K +++ + +AL+ MY + G + + + + + + +LVSW T +
Sbjct: 279 GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAI 338
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
Q+G G +A+ + M PN F VLS+C + +++G F+ + G
Sbjct: 339 SANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ-FHCLALKLGC 397
Query: 513 SPRMDHIASVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+ +++++++ GQ R A++ + + + W L+ G H D
Sbjct: 398 DSEICTGNALINMYSKCGQMGSARLAFDVMHTHDV----TSWNSLIHGHAQHGD 447
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 190/431 (44%), Gaps = 67/431 (15%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + + L+ MY + + A+++FD M +V+ +++LIS F + G E+A
Sbjct: 141 VRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAA 200
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACA--------------------------------SR 89
M+ L+PN +T ++AC SR
Sbjct: 201 EALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSR 260
Query: 90 ------------------GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
G G+++H + L + VSN L++MYG+ GL+ +
Sbjct: 261 NEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELE 320
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
+ + + +SW + +S+ Q G + + G + ++ +SVL +CA +
Sbjct: 321 AMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVA 380
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+L GMQ H L K + + LIN+Y+KC ++ A F + D+T+W++LI
Sbjct: 381 SLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIH 440
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G+AQ G A +A+++F KM S+G+ P + TF LG + G + L ++
Sbjct: 441 GHAQHGDANKALEVFSKMRSNGIKPDDSTF---LGVLMGCNHS-GMVEEGELFFRLMIDQ 496
Query: 312 FTFVANT-----VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIE 365
++F ++D + +E+L+ ++M E D + W L LASC ++
Sbjct: 497 YSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTL----LASCKLHRNLD 552
Query: 366 LLK---DMLFE 373
+ K D L E
Sbjct: 553 IGKLAADRLME 563
>gi|413944451|gb|AFW77100.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 678
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 199/622 (31%), Positives = 337/622 (54%), Gaps = 13/622 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV-- 71
N+LL Y++ DA++LFDEMP RN++SWS +ISG + G+ A F M+
Sbjct: 45 NNLLYAYLRRQVPADARRLFDEMPRRNLVSWSVVISGSAHHGVLAEAFALFSHMLHGAGH 104
Query: 72 ---LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
P+ +T V+ C+ D +G ++H + + G++ + V+ L++MY KCG +
Sbjct: 105 GSWDRPDSFTLGALVAGCSRARDVDAGMQVHACVAKFGVDEDDSVAAALVDMYAKCGWVD 164
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVH---GLKIF--LLSRKSGVAISEFSCASV 183
S+ F + +R+ +SW S+++ G + L +F +L+ K + +SC +
Sbjct: 165 SSWRAFTLAPQRSVLSWTSMIACLVNQGSSGYYDTSLLLFKKMLALKVWPTNATYSC--I 222
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L L VGMQ+H + K E D + L+ +Y +C +D R+ I+ D
Sbjct: 223 LKVFDTPDLLSVGMQLHGCLLKMGTEVDTALGTALMTMYGRCGGVDEIPRLACRIR-HDA 281
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+ +AL+G YA+ G EAI +F +M + + + +L + + RQ+H
Sbjct: 282 LSRTALLGAYARTGYNAEAIGVFKEMIMKNMAIDQSAMTGMLQVCSSFGQLRMVRQVHCY 341
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+K F T + N + Y +C + + F M+E+D++SW AL+ + + E
Sbjct: 342 ALKTFFKLDTLLLNATITVYGRCGDINSAETVFYLMEENDIISWTALLTCYTQNGLDEEV 401
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ + ML +G ++ +++L SS I + G Q H +K G D + + +ALV +
Sbjct: 402 LLFFRKMLRKGLGSPVFCITSVLRASSSISNLAVGLQIHSRTLKLGIDDDNSVQNALVTL 461
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
YA CG + A K+F+ +S++++V+WN +L ++QHG A++++ +MQE I P+ TF
Sbjct: 462 YANCGSVQVALKIFNSMSNRDIVTWNALLTSFSQHGSEVAAIQLFDLMQEEGICPDAYTF 521
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+G+LS+C +GLV+EG YFN M + + P+M H +V L A G+ A +FI + P
Sbjct: 522 VGLLSSCSRMGLVKEGCEYFNEMKEKYNLEPKMVHYTCMVDLLARAGRFCDAMDFIDAMP 581
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
EP++++W LL+ CK H +L LGR AA+KIL P D SA+I+LS+++A +MWDE
Sbjct: 582 YEPDQILWEALLASCKVHGNLGLGRIAAKKILEITPHDYSAYIILSSIHASVDMWDEKYW 641
Query: 604 VRKIMKEKSLKKDTGCSWTELQ 625
R + + +KDTG SW + Q
Sbjct: 642 NRTVFDTQRARKDTGRSWIDAQ 663
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 214/480 (44%), Gaps = 14/480 (2%)
Query: 93 RSG---KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
RSG +HG + G +++ + N L+ Y + + + A+ +FD RN +SW ++
Sbjct: 20 RSGGNPHSVHGVAIKLGCIVSTFLCNNLLYAYLRRQVPADARRLFDEMPRRNLVSWSVVI 79
Query: 150 SSYCQCGEHVHGLKIFL-----LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF 204
S G +F S F+ +++ C+ ++ GMQ+H+ V
Sbjct: 80 SGSAHHGVLAEAFALFSHMLHGAGHGSWDRPDSFTLGALVAGCSRARDVDAGMQVHACVA 139
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC---E 261
K ++ D VA L+++YAKC +D + R F+ + +W+++I G +
Sbjct: 140 KFGVDEDDSVAAALVDMYAKCGWVDSSWRAFTLAPQRSVLSWTSMIACLVNQGSSGYYDT 199
Query: 262 AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
++ LF KM + + P+ T+S +L F G QLH ++KMG T + ++
Sbjct: 200 SLLLFKKMLALKVWPTNATYSCILKVFDTPDLLSVGMQLHGCLLKMGTEVDTALGTALMT 259
Query: 322 FYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYT 381
Y +C ++E + + HD +S AL+ + + + EAI + K+M+ + +
Sbjct: 260 MYGRCGGVDEIPRLACRI-RHDALSRTALLGAYARTGYNAEAIGVFKEMIMKNMAIDQSA 318
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
+ +L + S + +Q HC +K F + ++ +A + +Y +CG +N A VF +
Sbjct: 319 MTGMLQVCSSFGQLRMVRQVHCYALKTFFKLDTLLLNATITVYGRCGDINSAETVFYLME 378
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
+++SW +L Y Q+GL E L + M + VL A I + G
Sbjct: 379 ENDIISWTALLTCYTQNGLDEEVLLFFRKMLRKGLGSPVFCITSVLRASSSISNLAVGLQ 438
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ ++ GI ++V L+A G + A + S + V W LL+ H
Sbjct: 439 IHSRTLK-LGIDDDNSVQNALVTLYANCGSVQVALKIFNSMS-NRDIVTWNALLTSFSQH 496
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 128/251 (50%), Gaps = 8/251 (3%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F + + N + +Y + IN A+ +F M E ++ISW+AL++ ++Q G+ E L +FR
Sbjct: 347 FKLDTLLLNATITVYGRCGDINSAETVFYLMEENDIISWTALLTCYTQNGLDEEVLLFFR 406
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M+ L + + A +S + G +IH R + G++ ++ V N L+ +Y CG
Sbjct: 407 KMLRKGLGSPVFCITSVLRASSSISNLAVGLQIHSRTLKLGIDDDNSVQNALVTLYANCG 466
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ A +F++ R+ ++W +LL+S+ Q G V +++F L ++ G+ ++ +L
Sbjct: 467 SVQVALKIFNSMSNRDIVTWNALLTSFSQHGSEVAAIQLFDLMQEEGICPDAYTFVGLLS 526
Query: 186 ACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAK----CEKLDLASRVFSNIQL 240
+C+ +G +K G + + + K LE +++L A+ C+ +D +
Sbjct: 527 SCSRMGLVKEGCEYFNEMKEKYNLEPKMVHYTCMVDLLARAGRFCDAMDFIDAMPYE--- 583
Query: 241 PDLTAWSALIG 251
PD W AL+
Sbjct: 584 PDQILWEALLA 594
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 207/670 (30%), Positives = 349/670 (52%), Gaps = 3/670 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERN-VISWSALISGFSQIGMPEVA 60
I G V N L+ +Y K + IN A+KLFD M RN V+SW+++IS +S GM A
Sbjct: 85 IKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEA 144
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ + N YT+ A+ AC + G +IH + +SG L+ +V+N L+ M
Sbjct: 145 LCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAM 204
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G + A +F ++ ++W S+L+ + Q G + L+ F + + + + S
Sbjct: 205 YVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSI 264
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S++ A LG L G +IH+ K + + V LI++YAKC + R F +
Sbjct: 265 ISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAH 324
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL +W+ GYAQ +A++L ++ G+ +L A + +++
Sbjct: 325 KDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEI 384
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H I+ G S + NT++D Y +C +++ +++ F+ ++ DVVSW ++I+ ++ +
Sbjct: 385 HGYTIRGGLSD-PVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLA 443
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A+E+ M G P+ T +IL+ + ++ GK+ H I++ GF I + L
Sbjct: 444 NKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTL 503
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYA+CG + DA K+F ++NL+ W M+ Y HG G A+E++ M++ KI P+
Sbjct: 504 VDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDH 563
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ +L AC H GLV EG + M ++ + P +H +V L R AY+ +K
Sbjct: 564 ITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVK 623
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
S EP VW LL C+ H + +G AAEK+L D ++ ++++SNV+A W +
Sbjct: 624 SMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKD 683
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL-FDGG 659
+VR MK L K+ GCSW E+ NK+H F + + +++ + Q++ L +GG
Sbjct: 684 VEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGG 743
Query: 660 YVPDPIYSSH 669
YV + H
Sbjct: 744 YVAQTKFVLH 753
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 157/544 (28%), Positives = 287/544 (52%), Gaps = 4/544 (0%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY K + DA+ +FD+M ER++ +W+A++ G+ G AL +R M + + YT
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
+ + AC D G EIHG + G + V N L+ +Y KC ++ A+ +FD
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 139 ERNS-ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
RN +SW S++S+Y G L +F K+GV + ++ A+ L AC +K+GM
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
QIH+ + K D +VA L+ +Y + K+ A+ +F N++ D+ W++++ G+ Q G
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
EA++ F + ++ L P +V+ ++ A + + G+++H+ IK GF S V N
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
T++D Y+KC + + FD M D++SW AG+ + Y +A+ELL+ + EG
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ +IL + + K+ H ++ G S+ V+ + ++D+Y +CG ++ A ++F
Sbjct: 361 DATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDYAVRIF 419
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ + K++VSW +M+ Y +GL +ALE++S M+E ++P+ T + +LSA + ++
Sbjct: 420 ESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLK 479
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+G +IR G ++V ++A G AY+ + N ++W ++S
Sbjct: 480 KGKEIHGFIIR-KGFILEGSISNTLVDMYARCGSVEDAYKIFTCTK-NRNLILWTAMISA 537
Query: 558 CKTH 561
H
Sbjct: 538 YGMH 541
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 206/400 (51%), Gaps = 3/400 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG +V N L+ MYV+F ++ +A +F + +++++W+++++GF Q G+ A
Sbjct: 186 ILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEA 245
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F + L+P+ + + + A G +GKEIH ++G + N V N LI+M
Sbjct: 246 LEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDM 305
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC +S FD ++ ISW + + Y Q ++ L++ + G+ +
Sbjct: 306 YAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMI 365
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L AC L L +IH + L D + +I++Y +C +D A R+F +I+
Sbjct: 366 GSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVYGECGIIDYAVRIFESIEC 424
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+++I Y G A +A+++F M +GL P VT +L A + G+++
Sbjct: 425 KDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEI 484
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H II+ GF ++NT++D Y++C +E++ K F +++ W A+I+ + Y
Sbjct: 485 HGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAY-GMHGY 543
Query: 361 GE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
GE A+EL M E P+ T+ +L S + GK
Sbjct: 544 GEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGK 583
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 207/624 (33%), Positives = 349/624 (55%), Gaps = 8/624 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G NV + L+ MY K S+++ A+++F+ + ERN++ W+A++ GF+Q G+ + + +F
Sbjct: 339 GLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFF 398
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M +P+ +T+ SACAS G ++H M ++ N V+N L++MY K
Sbjct: 399 SCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKS 458
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR--KSGVAISEFSCAS 182
G L A+ F+ +++SW +++ Y Q E + F+ R +GV E S AS
Sbjct: 459 GALKEARKQFELMKIHDNVSWNAIIVGYVQ--EEYNDEAFFMFRRMVSNGVLPDEVSLAS 516
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
++ ACA + LK G Q H L+ K L+ LI++Y KC + A VF ++ +
Sbjct: 517 IVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRN 576
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ + +ALI GY +G EAI LF ++ GL P+EVTF+ +L GRQ+H
Sbjct: 577 VVSVNALIAGYT-MGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHG 635
Query: 303 LIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHY 360
++K GF SS V ++L Y + +S F E+ +V W ALI+G+ H+
Sbjct: 636 QVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHH 695
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A++ + M + P+ ++++L + + +++ G++ H I GF+ + V S+L
Sbjct: 696 EKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSL 755
Query: 421 VDMYAKCGRLNDARKVFDHLSSKN-LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
+DMYAKCG + + +VF + +N ++SWN+M+VG A++G EALEI+ M++ I P+
Sbjct: 756 IDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPD 815
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ TF+GVLSAC H G V EG F+ M+ ++ + PR+DH+ +V + G A EFI
Sbjct: 816 EVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFI 875
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ + ++W LL C+ H D V G+ AA+K++ P+ +S++++LS++YAE+ W
Sbjct: 876 NKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSIYAESENWS 935
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTE 623
+R+ MK K +KK G SW E
Sbjct: 936 GAVSLRREMKLKGVKKLPGYSWIE 959
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/561 (30%), Positives = 298/561 (53%), Gaps = 8/561 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M G P+ IT ++ YV R+ DA+KLF ++P NV++W+ +ISG ++ G E A
Sbjct: 234 MQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEA 293
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+++F + L+ + +SA AS G +H + + GL+ N +V + L+NM
Sbjct: 294 ISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNM 353
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + +A+ VF++ ERN + W ++L + Q G ++ F ++ G EF+
Sbjct: 354 YAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTF 413
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+ ACA L L G Q+H+++ K + FVA L+++YAK L A + F +++
Sbjct: 414 TSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKI 473
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +W+A+I GY Q EA +F +M S+G++P EV+ + ++ A A+V+E G+Q
Sbjct: 474 HDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQC 533
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L++K+G + T ++++D Y KC ++ + F M +VVS NALIAG+ H
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMG-HL 592
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF-DSNVVIGSA 419
EAI L +++ G P T++ +L+ + G+Q H ++K GF S+ ++ +
Sbjct: 593 EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVS 652
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+ +Y R D+ +F L K LV W ++ GYAQ +AL+ Y M+ + I P
Sbjct: 653 LLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILP 712
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI--ASVVHLFACRGQTRRAY 536
+ F VL AC + ++ G +S+I G + MD + +S++ ++A G + +
Sbjct: 713 DQAAFASVLRACAGMSSLQNG-QEIHSLIFHTGFN--MDEVTCSSLIDMYAKCGDVKGSL 769
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
+ + P N + W ++ G
Sbjct: 770 QVFREMPRRNNVISWNSMIVG 790
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 254/490 (51%), Gaps = 36/490 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +GF L+ MY K + DA+ +FD + +SW+ALI+G+ + G P A
Sbjct: 168 VFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEA 227
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F RM R G + ++N
Sbjct: 228 VKVF-----------------------------------DRMQRVGHAPDQITLVTVVNA 252
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G L+ A+ +F N ++W ++S + + G + FL +K+G+ + S
Sbjct: 253 YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A A L L G +H+ K L+ + +V L+N+YAKC K+D A +VF+++
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+A++GG+AQ G A E ++ F M G P E TF+ + A A + G QL
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQL 432
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+++IK F+S FVAN ++D Y+K L+E+ K F+ M HD VSWNA+I G++ +
Sbjct: 433 HTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYN 492
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA + + M+ G P+ + ++I++ +++ ++ G+Q HC +VK G D++ GS+L
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSL 552
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMY KCG + AR VF + S+N+VS N ++ GY L EA+ ++ +Q +KP +
Sbjct: 553 IDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHL-EEAIHLFQEIQMVGLKPTE 611
Query: 481 NTFIGVLSAC 490
TF G+L C
Sbjct: 612 VTFAGLLDGC 621
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/597 (25%), Positives = 283/597 (47%), Gaps = 87/597 (14%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N ++ +YVK ++ AQK F + +++V +W++++S + G+ + F M +
Sbjct: 80 NVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVR 139
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN +T+ +SAC+ D G+++H ++++G S LI+MY KC L A+ V
Sbjct: 140 PNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLV 199
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD +L +++SW +L++ Y + G + +K+F ++ G A + + +V+ A
Sbjct: 200 FDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNA------- 252
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+VA+G +L A ++F+ I P++ AW+ +I G+
Sbjct: 253 -------------------YVALG---------RLADARKLFTQIPNPNVVAWNVMISGH 284
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
A+ G A EAI F+++ +GL + + VL A A + G +H+ K G
Sbjct: 285 AKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNV 344
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+V + +++ Y+KC ++ + + F+ + E ++V WNA++ G + E +E M
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRH 404
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G P+ +T+++I + + + + +G Q H ++K F SN+ + +ALVDMYAK G L +A
Sbjct: 405 GPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEA 464
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
RK F+ + + VSWN ++VGY Q EA ++ M N + P++ + ++SAC ++
Sbjct: 465 RKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV 524
Query: 494 -----------------------------------GLVEEGWHYFNSMIRDHGISPR--- 515
G+V F SM + +S
Sbjct: 525 QELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALI 584
Query: 516 ----MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
M H+ +HLF + I+ ++P +V + LL GC L LGR
Sbjct: 585 AGYTMGHLEEAIHLF----------QEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGR 631
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 230/467 (49%), Gaps = 43/467 (9%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
+ K IH + + G+ L + N ++++Y KCG + AQ F +++ +W S+LS Y
Sbjct: 59 TAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYL 118
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
G ++ F+ V +EF+ A VL AC+ L ++ G Q+H VFK F F
Sbjct: 119 DHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSF 178
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
GLI++YAKC L A VF D +W+ALI GY + G EA+ +F +M G
Sbjct: 179 CQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVG 238
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
P ++T V+ A+ + GR L ++
Sbjct: 239 HAPDQITLVTVVNAYVAL-----GR------------------------------LADAR 263
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
K F ++ +VV+WN +I+GH EAI ++ G + ++L+ + +
Sbjct: 264 KLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLS 323
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+ +G H K G D NV +GSALV+MYAKC +++ A++VF+ L +N+V WN ML
Sbjct: 324 MLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLG 383
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
G+AQ+GL +E +E +S M+ + +P++ TF + SAC + + G MI++ +
Sbjct: 384 GFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNK-FA 442
Query: 514 PRMDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ ++V ++A G + R+ +E +K I N V W ++ G
Sbjct: 443 SNLFVANALVDMYAKSGALKEARKQFELMK---IHDN-VSWNAIIVG 485
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 244/468 (52%), Gaps = 14/468 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + F N+ N L+ MY K + +A+K F+ M + +SW+A+I G+ Q + A
Sbjct: 436 MIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEA 495
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
FR MV + P+ + VSACA+ + + G++ H + + GL+ ++ + LI+M
Sbjct: 496 FFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDM 555
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG++ +A+ VF + RN +S +L++ Y G + +F + G+ +E +
Sbjct: 556 YVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTF 614
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
A +L C L +G QIH V K L + V + L+ LY ++ + +FS +Q
Sbjct: 615 AGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQ 674
Query: 240 LPD-LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
P L W+ALI GYAQ +A+ + M S ++P + F+ VL A A + G+
Sbjct: 675 YPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQ 734
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLAS 357
++HSLI GF+ ++++D Y+KC ++ SL+ F EM ++V+SWN++I G +
Sbjct: 735 EIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKN 794
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV-----KPGFDS 412
+ EA+E+ K M + P+ T+ +L+ S + G++ +V +P D
Sbjct: 795 GYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDH 854
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG 459
+G +VD+ + G LN+A + + L K + + W+T+L +HG
Sbjct: 855 ---LG-CMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHG 898
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 169/372 (45%), Gaps = 43/372 (11%)
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
VL L IHS K + + +++LY KC +D A + FS ++ D+ AW++
Sbjct: 53 VLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNS 112
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
++ Y G + FV M++ + P+E TF+ VL A + +++ GRQ+H + K G
Sbjct: 113 VLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTG 172
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F +F ++D Y+KC L ++ FD D VSW ALIAG++ EA+++
Sbjct: 173 FGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFD 232
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M GH P+ T ++N Y G
Sbjct: 233 RMQRVGHAPDQITLVTVVN-----------------------------------AYVALG 257
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
RL DARK+F + + N+V+WN M+ G+A+ G EA+ + +++ +K ++ VLS
Sbjct: 258 RLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLS 317
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMD---HIASVVHLFACRGQTRRAYEFIKSSPIE 545
A + ++ G SM+ +D ++ S + + A + + +S E
Sbjct: 318 AIASLSMLNYG-----SMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372
Query: 546 PNKVVWRCLLSG 557
N V+W +L G
Sbjct: 373 RNIVLWNAMLGG 384
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 317/615 (51%), Gaps = 66/615 (10%)
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N L+++Y K G L+ A+ VF ER+ +SW ++ + G +K+FL G++
Sbjct: 100 NSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLS 159
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE-------- 226
++F+ +VL +CA VG ++HS V K L VA ++N+Y KC
Sbjct: 160 PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAV 219
Query: 227 -----------------------KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
++DLA +F N+ + +W+A+I GY Q G +A+
Sbjct: 220 FERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKAL 279
Query: 264 DLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
F +M S S + P E T + VL A A++ G+Q+H+ I++ V N ++
Sbjct: 280 WFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISM 339
Query: 323 YSK------------------------CELLEESLK---------TFDEMDEHDVVSWNA 349
Y+K LLE +K FD M DVV+W A
Sbjct: 340 YAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTA 399
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I G+ + H EA+EL + M+ G PN YT + +L++ + + +E+GKQ HC ++
Sbjct: 400 MIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSL 459
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIY 468
+ + + +++V MYA+ G L AR+VFD + K V+W +M+V AQHGLG +A+ ++
Sbjct: 460 QEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLF 519
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
M +KP+ TF+GVLSAC H+G V+EG YF + HGI P M H A +V L A
Sbjct: 520 EEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLAR 579
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIML 588
G A EFI+ P+EP+ + W LLS C+ HK+ L AAEK+LS DP ++ A+ L
Sbjct: 580 AGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSAL 639
Query: 589 SNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVM 648
SNVY+ W++ AK+ K K+KS+KK+TG SWT + N++H F Q ++
Sbjct: 640 SNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTA 699
Query: 649 NQLSVHLFDGGYVPD 663
++ + G+VPD
Sbjct: 700 AKMWDDIKKAGFVPD 714
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 158/596 (26%), Positives = 273/596 (45%), Gaps = 86/596 (14%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
NV T+N LL +Y K R+ DA+ +F EMPER+ +SW+ ++ G +++G A+ F MV
Sbjct: 95 NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
L P +T +S+CA+ G+++H + + GL V+N ++NMYGKCG
Sbjct: 155 TDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAE 214
Query: 129 SAQFVF-----------------DASL--------------ERNSISWVSLLSSYCQCGE 157
+A+ VF DA L +R +SW ++++ Y Q G
Sbjct: 215 TARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGL 274
Query: 158 HVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
+ L F +LS S +A EF+ SVL ACA LG + +G Q+H+ + + + + V
Sbjct: 275 NAKALWFFSRMLS-YSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVT 333
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLT------------------------------- 244
LI++YAK ++ A V + DL
Sbjct: 334 NALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRD 393
Query: 245 --AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
AW+A+I GY Q G EA++LF M SG P+ T + VL A + G+Q+H
Sbjct: 394 VVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHC 453
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYG 361
I+ + V+N+++ Y++ L + + FD + + V+W ++I LA G
Sbjct: 454 KAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVA-LAQHGLG 512
Query: 362 E-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV-KPGFDSNVVIGSA 419
E A+ L ++ML G P+ T+ +L+ + + ++ GK+ + K G + +
Sbjct: 513 EDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYAC 572
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN--KI 476
+VD+ A+ G ++A++ + + ++W ++L H + ++ + E I
Sbjct: 573 MVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVH----KNADLAELAAEKLLSI 628
Query: 477 KPND----NTFIGVLSACVHIGLVEEGWHYF--NSMIRDHGISPRMDHIASVVHLF 526
P + + V SAC + W S+ ++ G S HI + VH+F
Sbjct: 629 DPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFS--WTHIGNRVHVF 682
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 195/421 (46%), Gaps = 68/421 (16%)
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
A + + F L++LYAK +L A VF+ + D +W+ ++ G ++G+ EAI +F
Sbjct: 91 AAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMF 150
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
+ M + GL P++ T + VL + A + GR++HS ++K+G SS VAN+VL+ Y KC
Sbjct: 151 LDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKC 210
Query: 327 ----------ELLEE---------------------SLKTFDEMDEHDVVSWNALIAGHL 355
E + E +L F+ M + +VSWNA+IAG+
Sbjct: 211 GDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYN 270
Query: 356 ASCHYGEAIELLKDML-FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF---- 410
+ +A+ ML + P+ +T +++L+ +++ + GKQ H I++
Sbjct: 271 QNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIG 330
Query: 411 -----------------------------DSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
D NV+ +AL++ Y K G + AR++FD +S
Sbjct: 331 QVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMS 390
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
++++V+W M+VGY Q+G EA+E++ +M + +PN T VLS C + +E G
Sbjct: 391 NRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQ 450
Query: 502 YFNSMIRDHGISPRMDHIA-SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKT 560
IR + + ++ S+V ++A G A V W ++
Sbjct: 451 IHCKAIR--SLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQ 508
Query: 561 H 561
H
Sbjct: 509 H 509
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/567 (34%), Positives = 312/567 (55%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
K IH + R GL+ ++++ N ++ G + + + D + E N + +++
Sbjct: 27 KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
++I+ RK G++ F+ VL ACA + + ++G+++HSLV K E D FV
Sbjct: 87 DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVK 146
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
+ LINLY KC +D A +VF +I + +W+A I GY +GK EAID+F ++ GL
Sbjct: 147 ISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLR 206
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P + VL A + G + I + G FVA ++DFY KC +E +
Sbjct: 207 PDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSV 266
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
FD M E ++VSW+++I G+ ++ EA++L ML EG P+ Y +L + + A+
Sbjct: 267 FDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGAL 326
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
E G I F N V+G+AL+DMYAKCGR++ A +VF + K+ V WN + G
Sbjct: 327 ELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGL 386
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
A G ++AL ++ M+++ IKP+ NTF+G+L AC H GLVEEG YFNSM ++P
Sbjct: 387 AMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPE 446
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL 575
++H +V L G A++ IKS P+E N +VW LL GC+ H+D L +K++
Sbjct: 447 IEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLI 506
Query: 576 STDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSR 635
+ +P + +++LSN+YA ++ W+E AK+R IM E+ +KK G SW E+ +H F
Sbjct: 507 ALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGD 566
Query: 636 FAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+ ++ + +L+ L GYVP
Sbjct: 567 TSHPLSEKIYAKLGELAKDLKAAGYVP 593
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 216/462 (46%), Gaps = 6/462 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + N +L F N + ++ D+ E N+ ++ +I G + +
Sbjct: 33 LLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQES 92
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ + M L P+ +T+ + ACA D+ G ++H + ++G E ++ V LIN+
Sbjct: 93 IEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINL 152
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + +A VFD ++N SW + +S Y G+ + +F + G+ FS
Sbjct: 153 YTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSL 212
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
VL AC G+L+ G I + + + + FVA L++ Y KC ++ A VF +
Sbjct: 213 VEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLE 272
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +WS++I GYA G EA+DLF KM + GL P VL + A + G
Sbjct: 273 KNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWA 332
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
+LI F + + ++D Y+KC ++ + + F M + D V WNA I+G S H
Sbjct: 333 SNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHV 392
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ---THCCIVKPGFDSNVVIG 417
+A+ L M G P+ T+ +L + +E G++ + C+ +
Sbjct: 393 KDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFT--LTPEIEHY 450
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH 458
+VD+ + G L++A ++ + + N + W +L G H
Sbjct: 451 GCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLH 492
>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Glycine max]
Length = 715
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 204/646 (31%), Positives = 350/646 (54%), Gaps = 12/646 (1%)
Query: 13 YNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV--ALNYFRLMVCC 70
YN++L MY + + D+ +FD+MP R ++S++AL++ +S+ AL + MV
Sbjct: 51 YNNILSMYARCGSLTDSHLVFDKMPRRTIVSYNALLAAYSRASPNHAISALELYTQMVTN 110
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
L P+ T+ + A + G +H + ++ GL + + L+NMY CG LSSA
Sbjct: 111 GLRPSSTTFTSLLQASSLLEHWWFGSSLHAKGFKLGLN-DICLQTSLLNMYSNCGDLSSA 169
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
+ VF ++R+ ++W SL+ Y + + G+ +F+ G A ++F+ VL +C+ L
Sbjct: 170 ELVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRL 229
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
+ + G IH+ V + D + L+++Y + A R+FS ++ PDL +W+++I
Sbjct: 230 KDYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMI 289
Query: 251 GGYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
GY++ +A++LFV++ P + T++ ++ A + G+ LH+ +IK GF
Sbjct: 290 AGYSENEDGEKAMNLFVQLQEMCFPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGF 349
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
FV +T++ Y K + + + F + DVV W +I G+ AI
Sbjct: 350 ERSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQ 409
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M+ EGH + Y S ++N +++ + G+ HC VK G+D + + +L+DMYAK G
Sbjct: 410 MVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGS 469
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L A VF +S +L WN+ML GY+ HG+ EAL+++ + + + P+ TF+ +LSA
Sbjct: 470 LEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSA 529
Query: 490 CVHIGLVEEG---WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP-IE 545
C H LVE+G W+Y NS+ G+ P + H + +V LF+ A E I SP IE
Sbjct: 530 CSHSRLVEQGKFLWNYMNSI----GLIPGLKHYSCMVTLFSRAALLEEAEEIINKSPYIE 585
Query: 546 PNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVR 605
N +WR LLS C +K+ +G +AAE++L ED ++LSN+YA A WD+ A++R
Sbjct: 586 DNLELWRTLLSACVINKNFKVGIHAAEEVLRLKAEDGPTLVLLSNLYAAARKWDKVAEIR 645
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
+ M+ L K G SW E +N +H FS+ + + ++H +++L
Sbjct: 646 RNMRGLMLDKYPGLSWIEAKNDIHVFSSGDQSHPKADEVHAELHRL 691
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 247/487 (50%), Gaps = 13/487 (2%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSH---VSNCLINMYGKCGLLSSAQFVFDASLE 139
+ C++ R +++H + + S V N +++MY +CG L+ + VFD
Sbjct: 17 LQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKMPR 76
Query: 140 RNSISWVSLLSSYCQCGEH--VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
R +S+ +LL++Y + + + L+++ +G+ S + S+L A ++L + G
Sbjct: 77 RTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWWFGS 136
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
+H+ FK L D + L+N+Y+ C L A VF ++ D AW++LI GY +
Sbjct: 137 SLHAKGFKLGLN-DICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKNN 195
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
K E I LF+KM S G P++ T+ VL + + +K+ GR +H+ +I S + N
Sbjct: 196 KIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHLQN 255
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL---LKDMLFEG 374
++D Y ++ + + F M+ D+VSWN++IAG+ + +A+ L L++M F
Sbjct: 256 ALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFPK 315
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P+ YTY+ I++ + P+ +GK H ++K GF+ +V +GS LV MY K + A
Sbjct: 316 --PDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAW 373
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+VF +S K++V W M+ GY++ G A+ + M + +D GV++AC ++
Sbjct: 374 RVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLA 433
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
++ +G + G M S++ ++A G AY + S EP+ W +
Sbjct: 434 VLRQG-EIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAY-LVFSQVSEPDLKCWNSM 491
Query: 555 LSGCKTH 561
L G H
Sbjct: 492 LGGYSHH 498
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 140/273 (51%), Gaps = 10/273 (3%)
Query: 297 GRQLHSLIIKMGFSSFT----FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
RQLH+LI+ ++FT FV N +L Y++C L +S FD+M +VS+NAL+A
Sbjct: 29 ARQLHALILTTT-TAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKMPRRTIVSYNALLA 87
Query: 353 GH--LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
+ + H A+EL M+ G P+ T++++L SS + +G H K G
Sbjct: 88 AYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWWFGSSLHAKGFKLGL 147
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
+ ++ + ++L++MY+ CG L+ A VF + ++ V+WN++++GY ++ E + ++
Sbjct: 148 N-DICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWLFIK 206
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M P T+ VL++C + G ++ + +S + ++V ++ G
Sbjct: 207 MMSVGFAPTQFTYCMVLNSCSRLKDYRSG-RLIHAHVIVRNVSLDLHLQNALVDMYCNAG 265
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+ AY I S P+ V W +++G ++D
Sbjct: 266 NMQTAYR-IFSRMENPDLVSWNSMIAGYSENED 297
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +GF +V + L+ MY K + A ++F + ++V+ W+ +I+G+S++ A
Sbjct: 344 VIKTGFERSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSKMTDGICA 403
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F MV E + Y G V+ACA+ R G+ IH + G ++ VS LI+M
Sbjct: 404 IRCFFQMVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDM 463
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L +A VF E + W S+L Y G L++F K G+ + +
Sbjct: 464 YAKNGSLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIPDQVTF 523
Query: 181 ASVLGACA 188
S+L AC+
Sbjct: 524 LSLLSACS 531
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 38/237 (16%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G+ + L+ MY K + A +F ++ E ++ W++++ G+S GM E AL F
Sbjct: 449 GYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVF 508
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
++ L P+ T++ +SAC+ GK + M GL +C++ ++ +
Sbjct: 509 EEILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYMNSIGLIPGLKHYSCMVTLFSRA 568
Query: 125 GLLSSAQFVFDAS--LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
LL A+ + + S +E N W +LLS
Sbjct: 569 ALLEEAEEIINKSPYIEDNLELWRTLLS-------------------------------- 596
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
AC + N KVG+ V + E D + L NLYA K D + + N++
Sbjct: 597 ---ACVINKNFKVGIHAAEEVLRLKAE-DGPTLVLLSNLYAAARKWDKVAEIRRNMR 649
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 184/550 (33%), Positives = 307/550 (55%), Gaps = 4/550 (0%)
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
LI Y + GL+ A+ +FD ER+ ++W ++++ Y + + F K G + +
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQGRSPN 110
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE-KLDLASRVF 235
EF+ +SVL +C + L G +H +V K +E +V L+N+YA C ++ A +F
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFLIF 170
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+I++ + W+ LI G+ LG + ++ +M + + + A A +
Sbjct: 171 RDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDSVT 230
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+Q+H+ ++K GF S V N++LDFY +C L E+ + F EM++ D+++WN LI+ L
Sbjct: 231 TGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLIS-EL 289
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
EA+ + + +G PN YT+++++ ++I A+ G+Q H I + GF+ NV
Sbjct: 290 ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVE 349
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +AL+DMYAKCG + D+ +VF + + NLVSW +M++GY HG G EA+E++ M +
Sbjct: 350 LANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS 409
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
I+P+ F+ VLSAC H GLVE+G YFN M ++GI+P D VV L G+
Sbjct: 410 GIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGE 469
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDL-VLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
AYE ++ P +P++ W +L CK HK ++ R AA+K++ P ++MLS +YA
Sbjct: 470 AYELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVMELKPRMVGTYVMLSYIYA 529
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W E A+VRK+M+ KK+ G SW E++N++ F+ S ++ V+ L
Sbjct: 530 AEGKWVEFARVRKMMRMMGNKKEAGMSWIEVENQVFSFAVSDKMCPNASSVYSVLGLLIE 589
Query: 654 HLFDGGYVPD 663
+ GYVPD
Sbjct: 590 ETKEAGYVPD 599
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 231/452 (51%), Gaps = 5/452 (1%)
Query: 11 ITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC 70
I +L++ Y + + +A+ LFDEMPER+V++W+A+I+G++ A F M
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQ 105
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
PN +T + +C + G +HG + + G+E + +V N L+NMY C + A
Sbjct: 106 GRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEA 165
Query: 131 QF-VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
F +F +N ++W +L++ + G+ + GLK++ ++ + + A A
Sbjct: 166 AFLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASAS 225
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
+ ++ G QIH+ V K + + V +++ Y +C L A R F ++ DL W+ L
Sbjct: 226 IDSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTL 285
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I + + EA+ +F + S G +P+ TF+ ++ A A++ G+QLH I + GF
Sbjct: 286 ISELER-SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGF 344
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLK 368
+ +AN ++D Y+KC + +S + F E++E ++VSW +++ G+ + + EA+EL
Sbjct: 345 NKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M+ G P+ + +L+ +E G K + + G + + I + +VD+ +
Sbjct: 405 KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 428 GRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH 458
G++ +A ++ + + K + +W +L H
Sbjct: 465 GKIGEAYELVERMPFKPDESTWGAILGACKAH 496
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 131/255 (51%), Gaps = 4/255 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF N+ N +L Y + +++A++ F EM ++++I+W+ LIS + E A
Sbjct: 239 VVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISELERSDSSE-A 297
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ PN YT+ V+ACA+ G+++HGR+YR G N ++N LI+M
Sbjct: 298 LLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANALIDM 357
Query: 121 YGKCGLLSSAQFVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG + ++ VF E RN +SW S++ Y G +++F SG+
Sbjct: 358 YAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIV 417
Query: 180 CASVLGACAVLGNLKVGMQIHSLV-FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+VL AC G ++ G++ +++ + + D+ + +++L + K+ A + +
Sbjct: 418 FMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
Query: 239 QL-PDLTAWSALIGG 252
PD + W A++G
Sbjct: 478 PFKPDESTWGAILGA 492
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 118/248 (47%), Gaps = 12/248 (4%)
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
N ++ ++ K L+EE+ FDEM E DVV+W A+I G+ +S + A E +M +
Sbjct: 47 LATNLIVSYFEKG-LVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQ 105
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG-RLND 432
G PN +T S++L ++ + +G H +VK G + ++ + +AL++MYA C +
Sbjct: 106 GRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEA 165
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A +F + KN V+W T++ G+ G G L++Y M + A
Sbjct: 166 AFLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASAS 225
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR----GQTRRAYEFIKSSPIEPNK 548
I V G S+++ G + + S++ F CR + +R + ++ +
Sbjct: 226 IDSVTTGKQIHASVVK-RGFQSNLPVMNSILD-FYCRCGYLSEAKRYFHEMEDKDL---- 279
Query: 549 VVWRCLLS 556
+ W L+S
Sbjct: 280 ITWNTLIS 287
>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 205/622 (32%), Positives = 332/622 (53%), Gaps = 10/622 (1%)
Query: 5 GFHP-NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
GF P N + + +Y + +NDA K+FDE+P R+V++W+AL+ G+ Q G E+ L
Sbjct: 139 GFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLEC 198
Query: 64 FRLMVCC---VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
M +PN T G AC + GD SG+ +HG + ++G+ + + +++M
Sbjct: 199 ISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSM 258
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG+ A F + ++ +SW S++ Y + G ++ F ++ V
Sbjct: 259 YCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVI 318
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+L ++ G H L+ + D+ V L+++Y K L A R+F Q
Sbjct: 319 GCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQRSQ- 377
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ W+ +I GY ++GK + I LF +M G+ V + + + E GR +
Sbjct: 378 GSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSI 437
Query: 301 HSLIIKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H +IK GF T V N++++ Y KC+ + S + F+ E DV+ WNALI+ H+ H
Sbjct: 438 HCNVIK-GFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKH 495
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
Y EAI L M+ E PN T +L+ S + +E G++ H I + GF N+ +G+A
Sbjct: 496 YEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTA 555
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMYAKCG+L +R+VFD + K+++ WN M+ GY +G A+EI+++M+E+ +KPN
Sbjct: 556 LVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPN 615
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ TF+ +LSAC H GLVEEG + F M + + + P + H +V L A E +
Sbjct: 616 EITFLSLLSACAHAGLVEEGKNVFAKM-QSYSVKPNLKHYTCMVDLLGRSCNLEEAEELV 674
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
S PI P+ VW LLS CKTH + +G + + ++PE+ +IM++N+Y+ WD
Sbjct: 675 LSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIMVANMYSSIGRWD 734
Query: 600 ETAKVRKIMKEK-SLKKDTGCS 620
E VR+ MK++ S+ K G S
Sbjct: 735 EAENVRRTMKDRCSMGKKAGWS 756
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 136/561 (24%), Positives = 269/561 (47%), Gaps = 10/561 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISG-FSQIGMPEVA 60
+T+G N L+ +Y + + LF +P ++ W++ + FS+ P+
Sbjct: 35 VTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLYPQF- 93
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNCLIN 119
L+++ LM + PN++T+ S+ A RSG +H + G NS V + ++
Sbjct: 94 LSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSSFVS 153
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y +C ++ A VFD R+ ++W +L+ Y Q GE GL+ + G + +
Sbjct: 154 LYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPN 213
Query: 180 CASVLG---ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
++ G AC LG+L G +H LV K + + ++++Y KC A + FS
Sbjct: 214 ARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFS 273
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ DL +W+++I YA+ G + + F +M + + P + +L F + + G
Sbjct: 274 EVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYG 333
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+ H LII+ ++ V N++L Y K +L + + F + + + WN +I G+
Sbjct: 334 GKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLF-QRSQGSIEYWNFMIVGYGR 392
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ I+L ++M + G + + + I G+ HC ++K D + +
Sbjct: 393 IGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISV 452
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
++L++MY KC ++N + ++F+ S ++++ WN ++ + EA+ ++ +M
Sbjct: 453 TNSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQ 511
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
PN T + VLSAC H+ +E+G + I + G + ++V ++A GQ ++
Sbjct: 512 NPNTATLVVVLSACSHLAFLEKG-ERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSR 570
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
E + S +E + + W ++SG
Sbjct: 571 E-VFDSMMEKDVICWNAMISG 590
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 219/464 (47%), Gaps = 10/464 (2%)
Query: 99 HGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
H +G N ++ LI++Y +S+ +F + +++ W S L + +
Sbjct: 31 HAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLY 90
Query: 159 VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG- 217
L + L R V + F+ V + A ++ GM +H+L K F + A+G
Sbjct: 91 PQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGF-FPENSAVGS 149
Query: 218 -LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG--- 273
++LY++C++++ A +VF I + D+ AW+AL+ GY Q G++ ++ +M+ G
Sbjct: 150 SFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDS 209
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
P+ T A ++ + + GR LH L++K G + ++VL Y KC + E+
Sbjct: 210 QKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAY 269
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
++F E+ D++SW ++I + + + +ML CP+ IL+ +
Sbjct: 270 QSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSV 329
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+ GK H I++ + + ++ ++L+ MY K G L+ A ++F S ++ WN M+V
Sbjct: 330 DVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR-SQGSIEYWNFMIV 388
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
GY + G + ++++ MQ I+ + +++C +G + G ++I+ +
Sbjct: 389 GYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGF-VD 447
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ S++ ++ + ++ S E + ++W L+S
Sbjct: 448 ETISVTNSLIEMYGKCDKMNVSWRIFNRS--ERDVILWNALISA 489
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 181/371 (48%), Gaps = 15/371 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + P+ + N LL MY KF ++ A++LF + + ++ W+ +I G+ +IG
Sbjct: 341 IIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLF-QRSQGSIEYWNFMIVGYGRIGKNVKC 399
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ FR M + V A+++C G+ G+ IH + + ++ V+N LI M
Sbjct: 400 IQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEM 459
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKC ++ + +F+ S ER+ I W +L+S++ + + +F + + +
Sbjct: 460 YGKCDKMNVSWRIFNRS-ERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATL 518
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
VL AC+ L L+ G ++H + + + + + L+++YAKC +L+ + VF ++
Sbjct: 519 VVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMME 578
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR-- 298
D+ W+A+I GY G A AI++F M S + P+E+TF +L A A G+
Sbjct: 579 KDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNV 638
Query: 299 --QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHL 355
++ S +K +T ++D + LEE+ + M D W AL L
Sbjct: 639 FAKMQSYSVKPNLKHYT----CMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGAL----L 690
Query: 356 ASCHYGEAIEL 366
++C IE+
Sbjct: 691 SACKTHNQIEM 701
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 150/318 (47%), Gaps = 4/318 (1%)
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
+ H++ + F+A LI+LY +S +F ++ D W++ +
Sbjct: 28 LPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSR 87
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG-FSSFTFV 315
+ + + M S ++P+ TF V ++A G LH+L K+G F + V
Sbjct: 88 SLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAV 147
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG- 374
++ + YS+C+ + +++K FDE+ DVV+W AL+ G++ + +E + +M G
Sbjct: 148 GSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGD 207
Query: 375 --HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
PN T ++ + G+ H +VK G + I S+++ MY KCG +
Sbjct: 208 DSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPRE 267
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A + F + +K+L+SW +M+ YA+ G+ + + + M EN++ P+ +LS +
Sbjct: 268 AYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGN 327
Query: 493 IGLVEEGWHYFNSMIRDH 510
V G + +IR H
Sbjct: 328 SVDVYGGKAFHGLIIRRH 345
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 90/221 (40%), Gaps = 5/221 (2%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
+ ++++S I ++ H V G +N I + L+ +Y + +F L
Sbjct: 11 HGELISLSKRITTLQSLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLP 70
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
K+ WN+ L L + L YS+M+ + PN TF V S+ H ++ G +
Sbjct: 71 FKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMN 130
Query: 502 YFNSMIRDHGISPRMDHI-ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKT 560
+++ G P + +S V L++ + A + P+ + V W L+ G
Sbjct: 131 -LHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVR-DVVAWTALVIGYVQ 188
Query: 561 HKDLVLGRYAAEKI--LSTDPEDTSAHIMLSNVYAEANMWD 599
+ + +G ++ + D + +A + A N+ D
Sbjct: 189 NGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGD 229
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 204/671 (30%), Positives = 340/671 (50%), Gaps = 42/671 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G +V + L+ MY K + DA F M ERN +SW A+I+G
Sbjct: 190 VKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAG----------- 238
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
CV Y + + C + + +++H ++ + V ++++Y
Sbjct: 239 --------CVQNEQYMRGLELLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVY 290
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K L A+ F + +++ + G +++F +SG+ S +
Sbjct: 291 AKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLS 350
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
V ACA + V D V +++LY KC+ L A VF ++
Sbjct: 351 GVFSACAEVKGFDV---------------DVCVRNAILDLYGKCKALVEAYLVFQEMEQR 395
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +W+ +I Q + I +M SG+ + T+ VL A A ++ G +H
Sbjct: 396 DSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVH 455
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
IK G FV++TV+D Y KC ++ E+LK D + ++VSWN++IAG +
Sbjct: 456 GKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSE 515
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA + +ML G P+ +TY+ +L+ +++ IE GKQ H I+K + I S LV
Sbjct: 516 EAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLV 575
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAKCG + D++ +F+ + + VSWN M+ GYA HG G EALE++ Q+ + PN
Sbjct: 576 DMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHA 635
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL AC H+GL+++G YF+ M + + P+++H FAC G + A +FI+S
Sbjct: 636 TFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEH-------FACMG-PQEALKFIRS 687
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P+E + V+W+ LLS CK +D+ + AA +L DP+D+S +I+LSNVYAE+ W +
Sbjct: 688 MPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDV 747
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
++ R++M++ LKK+ GCSW E+Q++MH F + +++E++N L + GY
Sbjct: 748 SRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLVGEKVHPRSREVYEMLNNLICEMKLSGYE 807
Query: 662 PDPIYSSHFEE 672
P + +E
Sbjct: 808 PASALFAEVDE 818
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/592 (24%), Positives = 248/592 (41%), Gaps = 102/592 (17%)
Query: 86 CASRGDAR--SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSI 143
CAS G + +G+ H RM SG VSNCL+ MY +CG + A VFD R+++
Sbjct: 39 CASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDTV 98
Query: 144 SWVS-------------------------------LLSSYCQCGEHVHGLKIFLLSRKSG 172
SW + LLS YCQ G + + + + G
Sbjct: 99 SWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCG 158
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
VA + A +L AC L +L +G+QIH+L K LE D L+++Y KC L+ A
Sbjct: 159 VAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDAL 218
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
F + + +W A+I G Q + ++L + + + +
Sbjct: 219 HFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCRCKAITCLST--------------- 263
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
RQLH+ IK FSS V ++D Y+K + L ++ + F + H V + NA++
Sbjct: 264 ----ARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMV 319
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
G + + EA++L + M G + + S + + +++ GFD
Sbjct: 320 GLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEV---------------KGFDV 364
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+V + +A++D+Y KC L +A VF + ++ VSWNT++ Q+ + + + M
Sbjct: 365 DVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEML 424
Query: 473 ENKIKPNDNTFIGVLSACVHI-----GLVEEGWHYFNSMIRDHGISPRM----------- 516
+ ++ +D T+ VL AC + GLV G + + D +S +
Sbjct: 425 RSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMIT 484
Query: 517 ------DHIA--------SVVHLFACRGQTRRAYEFIK---SSPIEPNKVVWRCLLSGCK 559
D I S++ F+ Q+ A +F ++P+ + +L C
Sbjct: 485 EALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCA 544
Query: 560 THKDLVLGRYAAEKILSTDP-EDTSAHIMLSNVYAE-ANMWDETAKVRKIMK 609
+ LG+ +I+ + D L ++YA+ NM D K+ K
Sbjct: 545 NLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQK 596
>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 213/715 (29%), Positives = 360/715 (50%), Gaps = 52/715 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ SGF + + L+ +Y+ +++A KLFD++P NV W+ +ISG +
Sbjct: 36 IFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQV 95
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACAS-RGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L F LM+ + P+ T+ + AC+ + + ++IH ++ G + V N LI+
Sbjct: 96 LGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLID 155
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y K G + A+ VF+ ++S+SWV+++S Q G + +F KS V + +
Sbjct: 156 LYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYV 215
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+SVL AC + K+G Q+H + K L + FV L+ LY++ L A ++FS +
Sbjct: 216 FSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMH 275
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D ++++LI G AQ G + A+ LF KM + P VT + +L A A V G+Q
Sbjct: 276 RRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQ 335
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LHS +IKMG SS + ++LD Y KC +E + + F + +VV WN ++ + +
Sbjct: 336 LHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGN 395
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
E+ + M EG PN YTY +IL + + A++ G+Q H ++K GF NV + S
Sbjct: 396 LSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSV 455
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+DMYAK G L+ AR + L +++VSW M+ GY QH L EAL+++ M+ I+ +
Sbjct: 456 LIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSD 515
Query: 480 DNTFIGVLSACVHIGLVEEGWH-----YFNSMIRDHGIS--------------------- 513
+ F +SAC I + +G Y + D I
Sbjct: 516 NIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSIEDA 575
Query: 514 -------PRMDHIA--SVVHLFACRGQTRRA---YEFIKSSPIEPNKV------------ 549
P + ++ +++ ++ G A +E +K + PN V
Sbjct: 576 KREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGEMPIEPDA 635
Query: 550 -VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
+WR LLS C HK++ +G +AA +L +PED++ +++LSN+YA + WD + R++M
Sbjct: 636 MIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMM 695
Query: 609 KEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
K++ +KK+ G SW E++N +H F ++E ++ L+ + GYV D
Sbjct: 696 KDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQD 750
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/491 (29%), Positives = 240/491 (48%), Gaps = 3/491 (0%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ N TY+ C + G K++H R+++SG + + + LI++Y G + +A
Sbjct: 6 IRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAI 65
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA-VL 190
+FD N W ++S L +F L V E + ASVL AC+
Sbjct: 66 KLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGK 125
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
+V QIH+ + V LI+LY+K +DLA VF + L D +W A+I
Sbjct: 126 APFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMI 185
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
G +Q G+ EAI LF +M S ++P+ FS VL A ++ G QLH I+K G S
Sbjct: 186 SGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLS 245
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S TFV N ++ YS+ L + + F +M D +S+N+LI+G A++L + M
Sbjct: 246 SETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKM 305
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
+ P+ T +++L+ + + A GKQ H ++K G S+++I +L+D+Y KC +
Sbjct: 306 QLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDI 365
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
A + F ++N+V WN MLV Y Q G E+ I+ MQ + PN T+ +L C
Sbjct: 366 ETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTC 425
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
+G ++ G +I+ G + + ++ ++A G+ A ++ E + V
Sbjct: 426 TSLGALDLGEQIHTQVIKS-GFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVS 483
Query: 551 WRCLLSGCKTH 561
W +++G H
Sbjct: 484 WTAMIAGYTQH 494
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 145/290 (50%), Gaps = 3/290 (1%)
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M G+ + T+ ++ + + ++LH+ I K GF + + ++D Y
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
++ ++K FD++ +V WN +I+G LA + + L M+ E P+ T++++L
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 389 SSDIPA-IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
S A + +Q H I+ GF S+ ++ + L+D+Y+K G ++ A+ VF+ L K+ VS
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
W M+ G +Q+G EA+ ++ M ++ + P F VLSAC I L + G + I
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLG-EQLHGFI 239
Query: 508 RDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G+S ++V L++ G A E I S +++ + L+SG
Sbjct: 240 VKWGLSSETFVCNALVTLYSRWGNLIAA-EQIFSKMHRRDRISYNSLISG 288
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 200/606 (33%), Positives = 327/606 (53%), Gaps = 15/606 (2%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ PN YT+ A+ AC++ D G+ IH +GL+ + VS L++MY KC L A
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL- 190
+F R+ ++W ++L+ Y G + H + LLS + + + ++++ +L
Sbjct: 66 HIFATMPARDLVAWNAMLAGYAHHGMYHHAVA-HLLSMQMQMHRLRPNASTLVALLPLLA 124
Query: 191 --GNLKVGMQIHSLVFKCALEFDK----------FVAMGLINLYAKCEKLDLASRVFSNI 238
G L G +H+ + L ++ + L+++YAKC L A RVF +
Sbjct: 125 QQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM 184
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGG 297
+ WSALIGG+ + +A LF M + GL S + + L A A + G
Sbjct: 185 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG 244
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
QLH+L+ K G + N++L Y+K L+++++ FDEM D VS++AL++G++ +
Sbjct: 245 EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN 304
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA + K M P+ T +++ S + A++ G+ +H ++ G S I
Sbjct: 305 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 364
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL+DMYAKCGR++ +R+VF+ + S+++VSWNTM+ GY HGLG+EA ++ M
Sbjct: 365 NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFP 424
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ TFI +LSAC H GLV EG H+F+ M +G++PRM+H +V L + G AYE
Sbjct: 425 PDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYE 484
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FI+S P+ + VW LL C+ +K++ LG+ + I PE T ++LSN+Y+ A
Sbjct: 485 FIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGR 544
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
+DE A+VR I K + KK GCSW E+ +H F + Q +++ ++ + V +
Sbjct: 545 FDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKK 604
Query: 658 GGYVPD 663
GY PD
Sbjct: 605 LGYQPD 610
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 239/494 (48%), Gaps = 29/494 (5%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +G ++ LL MYVK + + DA +F MP R++++W+A+++G++ GM A+
Sbjct: 37 IHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAV 96
Query: 62 NYFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH------- 112
+ M + L PN T V + A +G G +H R+ L N +
Sbjct: 97 AHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTD 156
Query: 113 ---VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
+ L++MY KCG L A+ VFDA RN ++W +L+ + C +F
Sbjct: 157 GVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAML 216
Query: 170 KSGVA-ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
G+ +S S AS L ACA L +L++G Q+H+L+ K + D L+++YAK +
Sbjct: 217 AQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLI 276
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
D A +F + + D ++SAL+ GY Q G+A EA +F KM + + P T ++ A
Sbjct: 277 DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 336
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ + GR H +I G +S T + N ++D Y+KC ++ S + F+ M D+VSWN
Sbjct: 337 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWN 396
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THC 403
+IAG+ EA L +M G P+ T+ +L+ S + GK H
Sbjct: 397 TMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHG 456
Query: 404 CIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG----YAQHG 459
+ P + + +VD+ ++ G L++A + + + V L+G Y
Sbjct: 457 YGLTPRMEHYIC----MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNID 512
Query: 460 LGREALEIYSMMQE 473
LG+ ++ M+QE
Sbjct: 513 LGK---KVSRMIQE 523
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 141/302 (46%), Gaps = 15/302 (4%)
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M + P+ TF + L A + + + GR +H I G + FV+ +LD Y KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH--CPNLYTYSNIL 386
L ++ F M D+V+WNA++AG+ Y A+ L M + H PN T +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSN----------VVIGSALVDMYAKCGRLNDARKV 436
+ + A+ G H ++ N V++G+AL+DMYAKCG L AR+V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGL 495
FD + ++N V+W+ ++ G+ +A ++ +M+ + + + L AC +
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+ G ++++ G+ + S++ ++A G +A ++ + V + L+
Sbjct: 241 LRMG-EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALV 298
Query: 556 SG 557
SG
Sbjct: 299 SG 300
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G N L+ MY K RI+ ++++F+ MP R+++SW+ +I+G+ G+ + A
Sbjct: 352 VIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEA 411
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE-IHGRMYRSGLELNSHVSNCLIN 119
F M P+ T++ +SAC+ G GK H + GL C+++
Sbjct: 412 TALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVD 471
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ + G L A +F+ L + WV+LL +
Sbjct: 472 LLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 317/560 (56%), Gaps = 8/560 (1%)
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
V + C +G + G ++H + +SG LN SN LI+MY KC A VFD+ E
Sbjct: 10 VSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQI 199
RN +SW +L+S + G+ L +F + G+ +EF+ ++ L AC +L L+ G+QI
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
H K E V L+++Y+KC +++ A +VF I L +W+A+I G+ G
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 260 CEAIDLFVKMFSSGL--MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF--SSFTFV 315
+A+D F M + + P E T + +L A + G+Q+H +++ GF S +
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
+++D Y KC L + K FD++ E ++SW++LI G+ + EA+ L K +
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSNVVIGSALVDMYAKCGRLNDA 433
+ + S+I+ + +D + GKQ VK G +++V+ +++VDMY KCG +++A
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEA 367
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
K F + K+++SW ++ GY +HGLG++++ I+ M + I+P++ ++ VLSAC H
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G+++EG F+ ++ HGI PR++H A VV L G+ + A I + PI+PN +W+
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LLS C+ H D+ LG+ + +L D ++ + ++M+SN+Y +A W+E R++ K L
Sbjct: 488 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547
Query: 614 KKDTGCSWTELQNKMHYFST 633
KK+ G SW E++ ++H+F +
Sbjct: 548 KKEAGMSWVEIEREVHFFRS 567
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 245/476 (51%), Gaps = 9/476 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG N+IT N+L+ MY K A K+FD MPERNV+SWSAL+SG G + +
Sbjct: 32 LLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGS 91
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M + PN +T+ + AC G +IHG + G E+ V N L++M
Sbjct: 92 LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA--ISEF 178
Y KCG ++ A+ VF ++R+ ISW ++++ + G L F + +++ + EF
Sbjct: 152 YSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEF 211
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALE--FDKFVAMGLINLYAKCEKLDLASRVFS 236
+ S+L AC+ G + G QIH + + + L++LY KC L A + F
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
I+ + +WS+LI GYAQ G+ EA+ LF ++ S ++G FAD
Sbjct: 272 QIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQ 331
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+Q+ +L +K+ T V N+V+D Y KC L++E+ K F EM DV+SW +I G+
Sbjct: 332 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVV 415
+++ + +ML P+ Y +L+ S I+ G++ +++ G V
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG---LGREALEI 467
+ +VD+ + GRL +A+ + D + K N+ W T+L HG LG+E +I
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKI 507
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 325/582 (55%), Gaps = 13/582 (2%)
Query: 95 GKEIHGRM--------YRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV 146
GK IH ++ + S E N N LIN+Y KC L A+++FD R+ +S+
Sbjct: 31 GKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYN 90
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
L+ Y GEH+ +K+F S +E+ +VL ACA G + GMQ H +FK
Sbjct: 91 VLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKF 150
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFS----NIQLP-DLTAWSALIGGYAQLGKACE 261
L F FV L+++Y+KC +DLA +V NI D +++++ + G+ E
Sbjct: 151 GLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGE 210
Query: 262 AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
A+++ +M G++ VT+ V+G +++ G Q+H+ ++K G + FV + ++D
Sbjct: 211 AVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVD 270
Query: 322 FYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYT 381
+ KC + + K FD + +VV W +L+ +L + + E + LL M EG N +T
Sbjct: 271 MFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFT 330
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
++ +LN + + A+ G H + K G + V++G+AL++MY+KCG ++ + VF +
Sbjct: 331 FAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMR 390
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
++++++WN M+ GY+QHGLG++AL ++ M PN TF+GVLSAC H+ LV EG++
Sbjct: 391 NRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFY 450
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
Y N +++ + P ++H VV + G A F++++ ++ + V WR LL+ C H
Sbjct: 451 YLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIH 510
Query: 562 KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSW 621
++ LG AE IL DP D + +LSN+YA+A WD +RK+M+E+++KK+ G SW
Sbjct: 511 RNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSW 570
Query: 622 TELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
E++N +H FS+ + I ++ + L + GYVP+
Sbjct: 571 IEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVPN 612
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 233/455 (51%), Gaps = 15/455 (3%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N+I N L+ +YVK S++ A+ LFDEM R+V+S++ L+ G+ G + F+ MV
Sbjct: 54 NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMV 113
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ +PN Y + +SACA G G + HG +++ GL + V + L++MY KC +
Sbjct: 114 SSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVD 173
Query: 129 SAQFVFDASL-----ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
A V ++ + ++ + S+L++ + G +++ GV + SV
Sbjct: 174 LALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSV 233
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
+G C + +L +G+Q+H+ + K L FD FV L++++ KC + A +VF +Q ++
Sbjct: 234 MGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNV 293
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W++L+ Y Q G+ E ++L M G M +E TF+ +L AFA + G LH+
Sbjct: 294 VVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHAR 353
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+ K+G + V N +++ YSKC ++ S F +M D+++WNA+I G+ +A
Sbjct: 354 VEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQA 413
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVVIGS 418
+ L +DML G CPN T+ +L+ + + + G + V+PG + + +
Sbjct: 414 LLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVA 473
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTML 452
L + G L +A K ++V+W +L
Sbjct: 474 VL----CRAGMLEEAENFMRTTQVKWDVVAWRVLL 504
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 6/256 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V + L+ M+ K + A+K+FD + RNV+ W++L++ + Q G E
Sbjct: 253 LLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEET 312
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
LN M N +T+ ++A A R G +H R+ + G++ V N LINM
Sbjct: 313 LNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINM 372
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + S+ VF R+ I+W +++ Y Q G L +F +G + +
Sbjct: 373 YSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTF 432
Query: 181 ASVLGACAVLGNLKVGM-QIHSLV--FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
VL ACA L + G ++ L+ FK + + ++ + + L+ A
Sbjct: 433 VGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTC--VVAVLCRAGMLEEAENFMRT 490
Query: 238 IQLP-DLTAWSALIGG 252
Q+ D+ AW L+
Sbjct: 491 TQVKWDVVAWRVLLNA 506
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 187/568 (32%), Positives = 315/568 (55%), Gaps = 4/568 (0%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
C+ R G +H + ++G + + +SN ++NMY KCG + A+ VFD E+N +SW
Sbjct: 13 CSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSW 72
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+++S Y Q GE + ++ + + +E+ ASV+ ACA L + +G +IHS K
Sbjct: 73 SAMISGYDQAGEPQMAIDLY---SQMFLVPNEYVFASVISACASLSAVTLGQKIHSRSLK 129
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
E FV+ LI++Y KC + A VF+N P+ +++ALI G+ + + ++
Sbjct: 130 FGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEF 189
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F M GL+P F VLG + G +LH +K+ S F+ N ++ YS+
Sbjct: 190 FKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSE 249
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSN 384
L++E+ K F ++E DV+SWN LIA + + + + K M E + P+ +T+++
Sbjct: 250 LNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTS 309
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
L + + ++ GKQ H +++ ++ +G+ALV+MYAKCG + A +F + N
Sbjct: 310 ALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHN 369
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
LVSWNT++ G+ HGLG A+E++ M + I+P+ TFIG+L+AC H GLV++G YFN
Sbjct: 370 LVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFN 429
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
SM +GI+P ++H + ++ + G+ A E+++ P + VV LLS + H D+
Sbjct: 430 SMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDV 489
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
V+G A+ +L P TS +++LSN+YA MWD A+ RK +K LKK+ G S E+
Sbjct: 490 VIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEV 549
Query: 625 QNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
+ F+ F + ++ ++ LS
Sbjct: 550 NGSVEKFTIGDFTHLRIKEIKGILKTLS 577
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 229/438 (52%), Gaps = 7/438 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G +V NH+L MY K A+++FDEM E+N++SWSA+ISG+ Q G P++A
Sbjct: 29 VLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMA 88
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ + M L PN Y + +SACAS G++IH R + G E S VSN LI+M
Sbjct: 89 IDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISM 145
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC S A VF + E N +S+ +L++ + + + GL+ F L R+ G+ F+
Sbjct: 146 YMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAF 205
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
VLG C NLK G ++H K L+ F+ +I +Y++ + A + F I+
Sbjct: 206 MGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEE 265
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +W+ LI + + + +F M + + P + TF+ L A A + G+Q
Sbjct: 266 KDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQ 325
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ +++ V N +++ Y+KC + + F +M H++VSWN +IAG +
Sbjct: 326 IHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAG-FGNHG 384
Query: 360 YGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIG 417
GE A+EL + M G P+ T+ +L + ++ G+ + + G ++
Sbjct: 385 LGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHF 444
Query: 418 SALVDMYAKCGRLNDARK 435
S L+DM + GRLN+A +
Sbjct: 445 SCLIDMLGRAGRLNEAEE 462
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 208/400 (52%), Gaps = 19/400 (4%)
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +S+L C+ L+ G+ +H+ V K + D F++ ++N+YAKC A +VF +
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+L +WSA+I GY Q G+ AIDL+ +MF L+P+E F+ V+ A A + G+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++HS +K G+ S +FV+N+++ Y KC ++L F E + VS+NALI G + +
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+E K M +G P+ + + +L I + ++ G + HC VK DS IG+
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS-MMQENKIK 477
++ MY++ + +A K F + K+++SWNT++ + + L ++ M +E ++
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIR-----DHGISPRMDHIASVVHLFACRGQT 532
P+D TF L+AC + + G ++R D G+ ++V+++A G
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVG------NALVNMYAKCGCI 355
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
AY+ I S + N V W +++G H LG A E
Sbjct: 356 GYAYD-IFSKMVHHNLVSWNTIIAGFGNHG---LGERAVE 391
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 192/559 (34%), Positives = 304/559 (54%), Gaps = 10/559 (1%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
+Y AC G+ H +M R+ + N ++ MY KCG L+ A+ VFD
Sbjct: 12 SYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEM 71
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIF-----LLSRKSGVAISEFSCASVLGACAVLGN 192
ERN +SW +++S+Y + G G +F L ++ +G F L +
Sbjct: 72 RERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGF-----LRSLLNPSG 126
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L++G QIHS + L + V + N+Y KC L+ A VF + + AW+ ++ G
Sbjct: 127 LEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVG 186
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y Q + +A+ LF KM + G+ E FS VL A A ++E GRQ+H I+K+G S
Sbjct: 187 YTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESE 246
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V ++DFY KC LE + K F+ + E + VSW+ALI G+ + EA++ + +
Sbjct: 247 VSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRT 306
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
N +TY++I S + G Q H +K + SA++ MY++CGRL+
Sbjct: 307 RSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDY 366
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A +VF+ + + V+W ++ GYA G EAL+++ MQ+ ++PN TFI VL+AC H
Sbjct: 367 ATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSH 426
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
GLV EG Y SM ++G++ +DH +V +++ G + A E I+S P P+ + W+
Sbjct: 427 SGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWK 486
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
CLL GC T+++L +G AAE + DPEDT+ +I++ N+YA W E A VRK+M E++
Sbjct: 487 CLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERN 546
Query: 613 LKKDTGCSWTELQNKMHYF 631
L+K+ CSW ++ K+H F
Sbjct: 547 LRKELSCSWITVKGKVHRF 565
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/479 (30%), Positives = 245/479 (51%), Gaps = 8/479 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+P N +L MY K + DA+K+FDEM ERN++SW+ +IS +++ G+ + F
Sbjct: 42 NPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSN 101
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ +PN TY+G + + + GK+IH RSGL N+ V+ + NMY KCG
Sbjct: 102 MLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGW 161
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A+ VF+ E+N+++W ++ Y Q + L +F GV + E+ + VL A
Sbjct: 162 LEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKA 221
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA L L G QIH + K LE + V L++ Y KC L+ A++ F I P+ +W
Sbjct: 222 CAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSW 281
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
SALI GY Q+G+ EA+ F + + + + T++ + A + + + G Q H+ IK
Sbjct: 282 SALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIK 341
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
++ + ++ YS+C L+ + + F+ +D+ D V+W A+IAG+ + EA++L
Sbjct: 342 SSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKL 401
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-THCCIVKPGFDSNVVIGSALVDMYA 425
+ M G PN T+ +L S + G+Q G + + +VD+Y+
Sbjct: 402 FRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYS 461
Query: 426 KCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN--KIKPNDN 481
+ G L +A ++ + S + +SW +L G + LEI + EN ++ P D
Sbjct: 462 RAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTY----RNLEIGELAAENLFQLDPEDT 516
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 185/354 (52%), Gaps = 2/354 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I SG N + MYVK + A+ +F++M E+N ++W+ ++ G++Q AL
Sbjct: 138 IRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDAL 197
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F MV +E + Y + + ACA + G++IHG + + GLE V L++ Y
Sbjct: 198 ALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFY 257
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC L SA F+ E N +SW +L++ YCQ GE LK F R V I+ F+
Sbjct: 258 VKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYT 317
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+ AC+ L + G Q H+ K +L + +I +Y++C +LD A+RVF +I P
Sbjct: 318 SIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDP 377
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-L 300
D AW+A+I GYA G A EA+ LF +M G+ P+ VTF VL A + I GRQ L
Sbjct: 378 DAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYL 437
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
S+ G ++ + ++D YS+ L+E+L+ M D +SW L+ G
Sbjct: 438 ESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 182/387 (47%), Gaps = 2/387 (0%)
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDL 230
+G+++S S + AC + +L G H + + +F+ ++ +Y KC L
Sbjct: 4 AGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLAD 63
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
A +VF ++ +L +W+ +I YA+ G + +F M P+ T+ L + +
Sbjct: 64 ARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLN 123
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
G+Q+HS I+ G S V + + Y KC LE + F++M E + V+W +
Sbjct: 124 PSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGI 183
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
+ G+ + +A+ L M+ EG + Y +S +L + + + +G+Q H IVK G
Sbjct: 184 MVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGL 243
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
+S V +G+ LVD Y KC L A K F+ +S N VSW+ ++ GY Q G EAL+ +
Sbjct: 244 ESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFES 303
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
++ + N T+ + AC + G I+ ++ + A + C G
Sbjct: 304 LRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRC-G 362
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ A +S +P+ V W +++G
Sbjct: 363 RLDYATRVFESID-DPDAVAWTAIIAG 388
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 141/292 (48%), Gaps = 8/292 (2%)
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M +G+ S ++ + A +K GR H + + + F+ N+VL Y KC
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
L ++ K FDEM E ++VSWN +I+ + + + + + +ML PN TY L
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ +E GKQ H ++ G SN + +A+ +MY KCG L A VF+ +S KN V+W
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAW 180
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
++VGY Q +AL +++ M ++ ++ F VL AC + + G +++
Sbjct: 181 TGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVK 240
Query: 509 DHGISPRMDHIASVVHLFA-CRG--QTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G+ + +V + C +A+E+I EPN V W L++G
Sbjct: 241 -LGLESEVSVGTPLVDFYVKCSNLESATKAFEWIS----EPNDVSWSALITG 287
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 6/256 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G V L+ YVK S + A K F+ + E N +SWSALI+G+ Q+G E A
Sbjct: 238 IVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEA 297
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F + ++ N +TY AC++ D SG + H +S L H + +I M
Sbjct: 298 LKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITM 357
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG L A VF++ + ++++W ++++ Y G LK+F + GV + +
Sbjct: 358 YSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTF 417
Query: 181 ASVLGACAVLGNLKVGMQI---HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+VL AC+ G + G Q S + A D + M +++Y++ L A + +
Sbjct: 418 IAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCM--VDIYSRAGFLQEALELIRS 475
Query: 238 IQL-PDLTAWSALIGG 252
+ PD +W L+GG
Sbjct: 476 MPFSPDAMSWKCLLGG 491
>gi|15229753|ref|NP_190611.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75202753|sp|Q9SCT2.1|PP277_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g50420
gi|6561982|emb|CAB62471.1| putative protein [Arabidopsis thaliana]
gi|332645144|gb|AEE78665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 794
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/618 (32%), Positives = 332/618 (53%), Gaps = 8/618 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N+L+ MYV+ + A+K+FD+MP RNV+S++AL S +S+ P+ A F L E
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSR--NPDFASYAFPLTTHMAFE 193
Query: 74 ---PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
PN T+ V CA D G ++ ++ + G N V ++ MY CG L SA
Sbjct: 194 YVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
+ +FD R++++W +++ + + GL F SGV ++F+ + VL C+ L
Sbjct: 254 RRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKL 313
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G+ +G IH+ + D + L+++Y C + A VF I P+L +W+++I
Sbjct: 314 GSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSII 373
Query: 251 GGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
G ++ G +A+ ++ ++ S P E TFS + A A+ + + G+ LH + K+G+
Sbjct: 374 SGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGY 433
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
FV T+L Y K E + K FD M E DVV W +I GH + A++ +
Sbjct: 434 ERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIE 493
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M E + + ++ S+++ SD+ + G+ HC ++ GFD + + ALVDMY K G+
Sbjct: 494 MYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGK 553
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
A +F S+ +L WN+ML Y+QHG+ +AL + + EN P+ T++ +L+A
Sbjct: 554 YETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAA 613
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C H G +G +N M ++ GI H + +V+L + G A E I+ SP N+
Sbjct: 614 CSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQA 672
Query: 550 -VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
+WR LLS C ++L +G YAAE+IL DPEDT+ HI+LSN+YA W++ A++R+ +
Sbjct: 673 ELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKI 732
Query: 609 KEKSLKKDTGCSWTELQN 626
+ + KD G SW E+ N
Sbjct: 733 RGLASSKDPGLSWIEVNN 750
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 142/560 (25%), Positives = 268/560 (47%), Gaps = 15/560 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPE------VALNYFRLM 67
N+L+ MYV+ S + A+K+FD+MP+RN+++ L + F + M + L F+++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG---LELNSHVSNCLINMYGKC 124
L + V C S + ++IH + +G + + +N LI+MY +C
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC 145
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHV-HGLKIFLLSRKSGVAISEFSCASV 183
G L A+ VFD RN +S+ +L S+Y + + + + V + + S+
Sbjct: 146 GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSL 205
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
+ CAVL ++ +G ++S + K + V ++ +Y+ C L+ A R+F + D
Sbjct: 206 VQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDA 265
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
AW+ +I G + K + + F M SG+ P++ T+S VL + + G+ +H+
Sbjct: 266 VAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHAR 325
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
II + + N +LD Y C + E+ F + ++VSWN++I+G + +GE
Sbjct: 326 IIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG-CSENGFGEQ 384
Query: 364 IELLKDMLFEGHC--PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
L+ L P+ YT+S ++ +++ GK H + K G++ +V +G+ L+
Sbjct: 385 AMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLL 444
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
MY K A+KVFD + +++V W M+VG+++ G A++ + M K + +
Sbjct: 445 SMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGF 504
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
+ V+ AC + ++ +G F+ + G M ++V ++ G+ A E I S
Sbjct: 505 SLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETIFS 562
Query: 542 SPIEPNKVVWRCLLSGCKTH 561
P+ W +L H
Sbjct: 563 LASNPDLKCWNSMLGAYSQH 582
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 203/389 (52%), Gaps = 11/389 (2%)
Query: 112 HVSNCLINMYGKCGLLSSAQFVFDASLERNSISW--VSLLSSYCQCGEHVHGLKIFLLSR 169
+ +N LI+MY +C L A+ VFD +RN ++ +S + Y G +H I L S
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 170 KS--GVAISEF--SCASVLGACAVLGNLKVGMQIHSLVFKC---ALEFDKFVAMGLINLY 222
+ + ++E S + C + LK QIH+LV A + LI++Y
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK-ACEAIDLFVKMFSSGLMPSEVTF 281
+C L+ A +VF + ++ +++AL Y++ A A L M + P+ TF
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 282 SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
+ ++ A +++ + G L+S IIK+G+S V +VL YS C LE + + FD ++
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 342 HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
D V+WN +I G L + + + ++ML G P +TYS +LN S + + GK
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H I+ +++ + +AL+DMY CG + +A VF + + NLVSWN+++ G +++G G
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 462 REALEIY-SMMQENKIKPNDNTFIGVLSA 489
+A+ +Y +++ + +P++ TF +SA
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 224/489 (45%), Gaps = 17/489 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ NV+ +L MY + A+++FD + R+ ++W+ +I G + E
Sbjct: 225 IIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDG 284
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +FR M+ ++P +TY ++ C+ G GK IH R+ S + + N L++M
Sbjct: 285 LMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDM 344
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK----SGVAIS 176
Y CG + A +VF N +SW S++S C E+ G + L+ R+ S
Sbjct: 345 YCSCGDMREAFYVFGRIHNPNLVSWNSIISG---CSENGFGEQAMLMYRRLLRMSTPRPD 401
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
E++ ++ + A A G +H V K E FV L+++Y K + + A +VF
Sbjct: 402 EYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFD 461
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
++ D+ W+ +I G+++LG + A+ F++M+ + S V+GA +D+
Sbjct: 462 VMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQ 521
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G H L I+ GF V ++D Y K E + F D+ WN+++ +
Sbjct: 522 GEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQ 581
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+A+ + +L G P+ TY ++L S + GK + + G +
Sbjct: 582 HGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKH 641
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVS--WNTML---VGYAQHGLGREALEIYSMM 471
S +V++ +K G +++A ++ + N + W T+L V +G +Y+
Sbjct: 642 YSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIG-----LYAAE 696
Query: 472 QENKIKPND 480
Q K+ P D
Sbjct: 697 QILKLDPED 705
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 135/297 (45%), Gaps = 24/297 (8%)
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA----GHLASCHYGEAIE 365
+ + + N ++ Y +C LE++ K FD+M + ++V+ L A + S + + I+
Sbjct: 19 AEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIK 78
Query: 366 LLK-DMLFEGHCPNLYTYSNILNISS---DIPAIEWGKQTHCCIVKPGFDS---NVVIGS 418
L M+F P S+++ ++ I ++ +Q H ++ G + + +
Sbjct: 79 LGSFQMIF--FMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANN 136
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH-GLGREALEIYSMMQENKIK 477
L+ MY +CG L ARKVFD + +N+VS+N + Y+++ A + + M +K
Sbjct: 137 NLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK 196
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ---TRR 534
PN +TF ++ C + V G NS I G S + SV+ +++ G RR
Sbjct: 197 PNSSTFTSLVQVCAVLEDVLMG-SSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL--STDPEDTSAHIMLS 589
++ + + + V W ++ G + + G +L DP + I+L+
Sbjct: 256 IFDCVNNR----DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLN 308
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 207/624 (33%), Positives = 349/624 (55%), Gaps = 8/624 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G NV + L+ MY K S+++ A+++F+ + ERN++ W+A++ GF+Q G+ + + +F
Sbjct: 339 GLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFF 398
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M +P+ +T+ SACAS G ++H M ++ N V+N L++MY K
Sbjct: 399 SCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKS 458
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR--KSGVAISEFSCAS 182
G L A+ F+ +++SW +++ Y Q E + F+ R +GV E S AS
Sbjct: 459 GALKEARKQFELMKIHDNVSWNAIIVGYVQ--EEYNDEAFFMFRRMVSNGVLPDEVSLAS 516
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
++ ACA + LK G Q H L+ K L+ LI++Y KC + A VF ++ +
Sbjct: 517 IVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRN 576
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ + +ALI GY +G EAI LF ++ GL P+EVTF+ +L GRQ+H
Sbjct: 577 VVSVNALIAGYT-MGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHG 635
Query: 303 LIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHY 360
++K GF SS V ++L Y + +S F E+ +V W ALI+G+ H+
Sbjct: 636 QVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHH 695
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A++ + M + P+ ++++L + + +++ G++ H I GF+ + V S+L
Sbjct: 696 EKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSL 755
Query: 421 VDMYAKCGRLNDARKVFDHLSSKN-LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
+DMYAKCG + + +VF + +N ++SWN+M+VG A++G EALEI+ M++ I P+
Sbjct: 756 IDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPD 815
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ TF+GVLSAC H G V EG F+ M+ ++ + PR+DH+ +V + G A EFI
Sbjct: 816 EVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEFI 875
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ + ++W LL C+ H D V G+ AA+K++ P+ +S++++LS++YAE+ W
Sbjct: 876 NKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSIYAESENWS 935
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTE 623
+R+ MK K +KK G SW E
Sbjct: 936 GAVSLRREMKLKGVKKLPGYSWIE 959
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/561 (30%), Positives = 298/561 (53%), Gaps = 8/561 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M G P+ IT ++ YV R+ DA+KLF ++P NV++W+ +ISG ++ G E A
Sbjct: 234 MQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEA 293
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+++F + L+ + +SA AS G +H + + GL+ N +V + L+NM
Sbjct: 294 ISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNM 353
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + +A+ VF++ ERN + W ++L + Q G ++ F ++ G EF+
Sbjct: 354 YAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTF 413
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+ ACA L L G Q+H+++ K + FVA L+++YAK L A + F +++
Sbjct: 414 TSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKI 473
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +W+A+I GY Q EA +F +M S+G++P EV+ + ++ A A+V+E G+Q
Sbjct: 474 HDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQC 533
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L++K+G + T ++++D Y KC ++ + F M +VVS NALIAG+ H
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMG-HL 592
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF-DSNVVIGSA 419
EAI L +++ G P T++ +L+ + G+Q H ++K GF S+ ++ +
Sbjct: 593 EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVS 652
Query: 420 LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+ +Y R D+ +F L K LV W ++ GYAQ +AL+ Y M+ + I P
Sbjct: 653 LLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILP 712
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI--ASVVHLFACRGQTRRAY 536
+ F VL AC + ++ G +S+I G + MD + +S++ ++A G + +
Sbjct: 713 DQAAFASVLRACAGMSSLQNG-QEIHSLIFHTGFN--MDEVTCSSLIDMYAKCGDVKGSL 769
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
+ + P N + W ++ G
Sbjct: 770 QVFREMPRRNNVISWNSMIVG 790
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 254/490 (51%), Gaps = 36/490 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +GF L+ MY K + DA+ +FD + +SW+ALI+G+ + G P A
Sbjct: 168 VFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEA 227
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F RM R G + ++N
Sbjct: 228 VKVFD-----------------------------------RMQRVGHAPDQITLVTVVNA 252
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G L+ A+ +F N ++W ++S + + G + FL +K+G+ + S
Sbjct: 253 YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A A L L G +H+ K L+ + +V L+N+YAKC K+D A +VF+++
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+A++GG+AQ G A E ++ F M G P E TF+ + A A + G QL
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQL 432
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+++IK F+S FVAN ++D Y+K L+E+ K F+ M HD VSWNA+I G++ +
Sbjct: 433 HTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYN 492
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA + + M+ G P+ + ++I++ +++ ++ G+Q HC +VK G D++ GS+L
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSL 552
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMY KCG + AR VF + S+N+VS N ++ GY L EA+ ++ +Q +KP +
Sbjct: 553 IDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHL-EEAIHLFQEIQMVGLKPTE 611
Query: 481 NTFIGVLSAC 490
TF G+L C
Sbjct: 612 VTFAGLLDGC 621
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 253/486 (52%), Gaps = 35/486 (7%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N ++ +YVK ++ AQK F + +++V +W++++S + G+ + F M +
Sbjct: 80 NVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVR 139
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN +T+ +SAC+ D G+++H ++++G S LI+MY KC L A+ V
Sbjct: 140 PNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLV 199
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD +L +++SW +L++ Y + G + +K+F ++ G A + + +V+ A
Sbjct: 200 FDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNA------- 252
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+VA+G +L A ++F+ I P++ AW+ +I G+
Sbjct: 253 -------------------YVALG---------RLADARKLFTQIPNPNVVAWNVMISGH 284
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
A+ G A EAI F+++ +GL + + VL A A + G +H+ K G
Sbjct: 285 AKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNV 344
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+V + +++ Y+KC ++ + + F+ + E ++V WNA++ G + E +E M
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRH 404
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G P+ +T+++I + + + + +G Q H ++K F SN+ + +ALVDMYAK G L +A
Sbjct: 405 GPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEA 464
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
RK F+ + + VSWN ++VGY Q EA ++ M N + P++ + ++SAC ++
Sbjct: 465 RKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV 524
Query: 494 GLVEEG 499
++ G
Sbjct: 525 QELKRG 530
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 230/467 (49%), Gaps = 43/467 (9%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
+ K IH + + G+ L + N ++++Y KCG + AQ F +++ +W S+LS Y
Sbjct: 59 TAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYL 118
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
G ++ F+ V +EF+ A VL AC+ L ++ G Q+H VFK F F
Sbjct: 119 DHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSF 178
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
GLI++YAKC L A VF D +W+ALI GY + G EA+ +F +M G
Sbjct: 179 CQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVG 238
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
P ++T V+ A+ + GR L ++
Sbjct: 239 HAPDQITLVTVVNAYVAL-----GR------------------------------LADAR 263
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
K F ++ +VV+WN +I+GH EAI ++ G + ++L+ + +
Sbjct: 264 KLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLS 323
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+ +G H K G D NV +GSALV+MYAKC +++ A++VF+ L +N+V WN ML
Sbjct: 324 MLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLG 383
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
G+AQ+GL +E +E +S M+ + +P++ TF + SAC + + G MI++ +
Sbjct: 384 GFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNK-FA 442
Query: 514 PRMDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ ++V ++A G + R+ +E +K I N V W ++ G
Sbjct: 443 SNLFVANALVDMYAKSGALKEARKQFELMK---IHDN-VSWNAIIVG 485
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 243/468 (51%), Gaps = 14/468 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + F N+ N L+ MY K + +A+K F+ M + +SW+A+I G+ Q + A
Sbjct: 436 MIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEA 495
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
FR MV + P+ + VSACA+ + + G++ H + + GL+ ++ + LI+M
Sbjct: 496 FFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDM 555
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG++ +A+ VF + RN +S +L++ Y G + +F + G+ +E +
Sbjct: 556 YVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTF 614
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
A +L C L +G QIH V K L + V + L+ LY ++ + +FS +Q
Sbjct: 615 AGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQ 674
Query: 240 LPD-LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
P L W+ALI GYAQ +A+ + M S ++P + F+ VL A A + G+
Sbjct: 675 YPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQ 734
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLAS 357
++HSLI GF+ ++++D Y+KC ++ SL+ F EM ++V+SWN++I G +
Sbjct: 735 EIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKN 794
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-----PGFDS 412
+ EA+E+ K M + P+ T+ +L+ S + G++ +V P D
Sbjct: 795 GYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDH 854
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG 459
+G +VD+ + G LN+A + + L K + + W+T+L +HG
Sbjct: 855 ---LG-CMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHG 898
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 169/372 (45%), Gaps = 43/372 (11%)
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
VL L IHS K + + +++LY KC +D A + FS ++ D+ AW++
Sbjct: 53 VLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNS 112
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
++ Y G + FV M++ + P+E TF+ VL A + +++ GRQ+H + K G
Sbjct: 113 VLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTG 172
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F +F ++D Y+KC L ++ FD D VSW ALIAG++ EA+++
Sbjct: 173 FGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFD 232
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M GH P+ T ++N Y G
Sbjct: 233 RMQRVGHAPDQITLVTVVN-----------------------------------AYVALG 257
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
RL DARK+F + + N+V+WN M+ G+A+ G EA+ + +++ +K ++ VLS
Sbjct: 258 RLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLS 317
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMD---HIASVVHLFACRGQTRRAYEFIKSSPIE 545
A + ++ G SM+ +D ++ S + + A + + +S E
Sbjct: 318 AIASLSMLNYG-----SMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372
Query: 546 PNKVVWRCLLSG 557
N V+W +L G
Sbjct: 373 RNIVLWNAMLGG 384
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/484 (37%), Positives = 275/484 (56%), Gaps = 2/484 (0%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI-NLYAKCEKLDLASRVFSNIQ 239
+ +L C LG ++ G +H+ + + V +I N+YAKC LD A R+F +
Sbjct: 91 SKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMP 150
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ W+ALI G++Q + +A+ LF +M GL P+ T S +L A G Q
Sbjct: 151 TKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQ 210
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH+ +K G+ S +V + ++D Y++C ++ + FD M VSWNALI+GH
Sbjct: 211 LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGE 270
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
A+ LL M + P +TYS++ + + I A+E GK H ++K G IG+
Sbjct: 271 GEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNT 330
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+DMYAK G ++DA++VFD L ++VSWNTML G AQHGLG+E L+ + M I+PN
Sbjct: 331 LLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPN 390
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ +F+ VL+AC H GL++EG +YF +++ + + P + H + V L G RA FI
Sbjct: 391 EISFLCVLTACSHSGLLDEGLYYFE-LMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFI 449
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ PIEP VW LL C+ HK++ LG YAAE+ DP D+ ++LSN+YA A W
Sbjct: 450 REMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWR 509
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ AKVRK+MKE +KK CSW E++N +H F + Q ++ ++S + + G
Sbjct: 510 DVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKEIG 569
Query: 660 YVPD 663
YVPD
Sbjct: 570 YVPD 573
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 187/360 (51%), Gaps = 11/360 (3%)
Query: 14 NHLLL------MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
NHL+L MY K ++DA+++FDEMP +++++W+ALI+GFSQ P AL F M
Sbjct: 121 NHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQM 180
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
+ L+PN++T + A S G ++H + G + + +V + L++MY +CG +
Sbjct: 181 LRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHM 240
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+AQ FD ++ +SW +L+S + + GE H L + ++ + F+ +SV AC
Sbjct: 241 DAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSAC 300
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A +G L+ G +H+ + K L+ F+ L+++YAK +D A RVF + PD+ +W+
Sbjct: 301 ASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWN 360
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
++ G AQ G E +D F +M G+ P+E++F VL A + G L+ K
Sbjct: 361 TMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKY 420
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIEL 366
T +D + LL+ + + EM E W AL L +C + +EL
Sbjct: 421 KVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGAL----LGACRMHKNMEL 476
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 215/476 (45%), Gaps = 10/476 (2%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH--VSNCLINMYGKCGLLSS 129
L P+Y Y + C G G+ +H + S L++H + N ++NMY KCG L
Sbjct: 83 LVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNIIVNMYAKCGCLDD 141
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A+ +FD ++ ++W +L++ + Q L +F + G+ + F+ +S+L A
Sbjct: 142 ARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGS 201
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
L G Q+H+ K + +V L+++YA+C +D A F + +W+AL
Sbjct: 202 EHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNAL 261
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I G+A+ G+ A+ L KM P+ T+S V A A + G+ +H+ +IK G
Sbjct: 262 ISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGL 321
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
F+ NT+LD Y+K ++++ + FD + + DVVSWN ++ G E ++ +
Sbjct: 322 KLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQ 381
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
ML G PN ++ +L S ++ G + K + +V VD+ + G
Sbjct: 382 MLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGL 441
Query: 430 LNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
L+ A + + + + W +L H L +Y+ + ++ P+D+ +LS
Sbjct: 442 LDRAERFIREMPIEPTAAVWGALLGACRMH--KNMELGVYAAERAFELDPHDSGPRMLLS 499
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMD----HIASVVHLFACRGQTRRAYEFIK 540
M+++ G+ + I + VHLF +T + I+
Sbjct: 500 NIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIR 555
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/618 (32%), Positives = 330/618 (53%), Gaps = 41/618 (6%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF---------- 132
+ C + D +GK +H +S + +++ SN I +Y KCG L+ A+
Sbjct: 15 LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74
Query: 133 ---------------------VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
+FD E + +S+ +L+S+Y CGE L +F R+
Sbjct: 75 FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREM 134
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM--GLINLYAKCEKLD 229
G+ + F+ ++V+ AC ++ + Q+HS+ FD +V++ L+ Y K LD
Sbjct: 135 GLDMDXFTLSAVITACC--DDVGLIGQLHSVAVSSG--FDSYVSVNNALLTYYGKNGDLD 190
Query: 230 LASRVFSNIQ-LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
A RVF + + D +W+++I Y Q + +A+ LF +M GL T + VL AF
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL-LEESLKTFDEMDEHDVVSW 347
+++ GG Q H +IK GF + V + ++D YSKC + + K F+E+ E D+V W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310
Query: 348 NALIAGHLASCHYGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
N +++G+ + + E A+E + M G+ PN ++ +++ S++ + GKQ H +
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370
Query: 407 KPGFDSN-VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
K SN + + +AL+ MY+KCG L DAR++FD ++ N VS N+M+ GYAQHG+ E+L
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
++ M E +I P TFI VLSAC H G VEEGW+YFN M I P +H + ++ L
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
G+ A I P P + W LL C+TH ++ L AA ++L +P + + +
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPY 550
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLH 645
++LSN+YA A W+E A VRK M+++ +KK GCSW E++ ++H F + +++
Sbjct: 551 VVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIY 610
Query: 646 EVMNQLSVHLFDGGYVPD 663
E + ++S + GYVPD
Sbjct: 611 EFLEEMSGKMKRAGYVPD 628
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 265/548 (48%), Gaps = 20/548 (3%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
PNV ++N ++ Y K SR A +LFD++PE +++S++ LIS ++ G AL F M
Sbjct: 72 PNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGM 131
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
L+ + +T ++AC D ++H SG + V+N L+ YGK G L
Sbjct: 132 REMGLDMDXFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDL 189
Query: 128 SSAQFVF-DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
A+ VF R+ +SW S++ +Y Q E L +F + G+ + F+ ASVL A
Sbjct: 190 DDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTA 249
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC-EKLDLASRVFSNIQLPDLTA 245
L +L G+Q H + K + V GLI+LY+KC + +VF I PDL
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309
Query: 246 WSALIGGYAQLGKACE-AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+ ++ GY+Q + E A++ F +M G P++ +F V+ A +++ G+Q+HSL
Sbjct: 310 WNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369
Query: 305 IKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+K S V N ++ YSKC L+++ + FD M EH+ VS N++IAG+ E+
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMES 429
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF--DSNVVIGSALV 421
+ L + ML P T+ ++L+ + +E G + ++K F + S ++
Sbjct: 430 LHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG-WNYFNMMKEKFNIEPEAEHYSCMI 488
Query: 422 DMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
D+ + G+L++A + + + + W ++L H G L + + Q +++P++
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTH--GNIELAVKAANQVLQLEPSN 546
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD----HIASVVHLFACRGQT---- 532
VLS E +RD G+ + + +H+F +
Sbjct: 547 AAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMI 606
Query: 533 RRAYEFIK 540
+ YEF++
Sbjct: 607 KEIYEFLE 614
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 199/413 (48%), Gaps = 37/413 (8%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI---- 238
+L C +L G +HSL K + + + I LY+KC +L A + F +I
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 239 ---------------------QL------PDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
QL PDL +++ LI YA G+ A+ LF M
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
GL T S V+ A D IG QLHS+ + GF S+ V N +L +Y K L++
Sbjct: 134 MGLDMDXFTLSAVITACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 332 SLKTFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
+ + F M D VSWN++I + +A+ L ++M+ G +++T +++L +
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC-GRLNDARKVFDHLSSKNLVSWN 449
+ + G Q H ++K GF N +GS L+D+Y+KC G ++D RKVF+ ++ +LV WN
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWN 311
Query: 450 TMLVGYAQH-GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
TM+ GY+Q+ +ALE + MQ +PND +F+ V+SAC ++ +G + ++
Sbjct: 312 TMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALK 371
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
S R+ +++ +++ G + A E N V +++G H
Sbjct: 372 SDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHNTVSLNSMIAGYAQH 423
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 151/292 (51%), Gaps = 4/292 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE-RNVISWSALISGFSQIGMPEVA 60
++SGF V N LL Y K ++DA+++F M R+ +SW+++I + Q A
Sbjct: 165 VSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKA 224
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ MV L + +T ++A D G + HG++ ++G NSHV + LI++
Sbjct: 225 LGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDL 284
Query: 121 YGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH-GLKIFLLSRKSGVAISEF 178
Y KC G +S + VF+ E + + W +++S Y Q E + L+ F + G ++
Sbjct: 285 YSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDC 344
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF-VAMGLINLYAKCEKLDLASRVFSN 237
S V+ AC+ L + G QIHSL K + ++ V LI +Y+KC L A R+F
Sbjct: 345 SFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDR 404
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
+ + + +++I GYAQ G E++ LF M + P+ +TF VL A A
Sbjct: 405 MAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACA 456
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 144/286 (50%), Gaps = 12/286 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSR-INDAQKLFDEMPERNVISWSALISGFSQ-IGMPE 58
+I +GFH N + L+ +Y K ++D +K+F+E+ E +++ W+ ++SG+SQ E
Sbjct: 266 LIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLE 325
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCL 117
AL FR M PN ++V +SAC++ GK+IH +S + N V N L
Sbjct: 326 DALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNAL 385
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
I MY KCG L A+ +FD E N++S S+++ Y Q G + L +F + +A +
Sbjct: 386 IAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTS 445
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ SVL ACA G ++ G +++ F E + + M I+L + KL A +
Sbjct: 446 ITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCM--IDLLGRAGKLSEAENL 503
Query: 235 FSNIQL-PDLTAWSALIGG---YAQLGKACEAIDLFVKMFSSGLMP 276
+ + P W++L+G + + A +A + +++ S P
Sbjct: 504 IARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 150/324 (46%), Gaps = 49/324 (15%)
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
F ++L ++ G+ LHSL IK T+ +N + YSKC L + K F ++
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG-HCPNLYTYSNILNISSD----IPAI 395
+ +V S+NA+IA + E+ L+ LF+ P+L +Y+ +++ +D PA+
Sbjct: 71 DPNVFSFNAIIAAYAK-----ESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPAL 125
Query: 396 -------EWG----------------------KQTHCCIVKPGFDSNVVIGSALVDMYAK 426
E G Q H V GFDS V + +AL+ Y K
Sbjct: 126 GLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK 185
Query: 427 CGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
G L+DA++VF + ++ VSWN+M+V Y QH G +AL ++ M + + T
Sbjct: 186 NGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLAS 245
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRG---QTRRAYEFIKS 541
VL+A + + G + +I+ G + ++ L++ C G R+ +E I
Sbjct: 246 VLTAFTCLEDLSGGLQFHGQLIKT-GFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEI-- 302
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLV 565
EP+ V+W ++SG +++ +
Sbjct: 303 --TEPDLVLWNTMVSGYSQNEEFL 324
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 197/602 (32%), Positives = 327/602 (54%), Gaps = 6/602 (0%)
Query: 44 WSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY 103
W+ LI G+S G+ L + MV + P+ +T+ + ACA + R G+E+HG +
Sbjct: 10 WNTLIRGYSIAGVGG-GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68
Query: 104 RSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH-GL 162
+ G E + V N L++ YG CG L A VFD E++ +SW +++ + G H L
Sbjct: 69 KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128
Query: 163 KIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
+F L G+ + + +S L L K G ++H + LE D F+A LI++Y
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMY 188
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
AK AS VF + ++ +W+A+I +AQ A+ L +M G +P+ VTF+
Sbjct: 189 AKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFT 248
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
VL A A + G+++H+ I MG + FV+N + D Y+K L+ + FD
Sbjct: 249 NVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFD-TSLR 307
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
D VS+N LI GH + E++ L +M G + ++ L+ +++ AI+ GK+ H
Sbjct: 308 DEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIH 367
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
+++ F ++ + ++L+D Y KCGR+ AR +FD +++K++ SWNTM++GY G
Sbjct: 368 GFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELD 427
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
A++++ M+++ ++ + +FI VLSAC H GL+E+G YF+ + + GI P H A +
Sbjct: 428 TAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDEL-KARGIEPTQMHYACM 486
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDT 582
V L G A E IK PI P+ +W LL C+ + +L L +AAE + PE +
Sbjct: 487 VDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHS 546
Query: 583 SAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGI 642
+ +LSN+YAE WDE ++R++MK + +KK GCSW ++ + H F + +G+
Sbjct: 547 GYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWVQIGEQAHAFVVGE--KIEGL 604
Query: 643 DL 644
DL
Sbjct: 605 DL 606
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 226/441 (51%), Gaps = 2/441 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP-EV 59
++ GF +V N LL Y + DA ++FDEMPE++++SW+ +I FS G
Sbjct: 67 VVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRD 126
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL+ FRLM+ L+PN T + ++G+E+HG R GLE + ++N LI+
Sbjct: 127 ALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLID 186
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY K G + A VF +N +SW ++++++ Q + + + + G + +
Sbjct: 187 MYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVT 246
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+VL ACA +G ++ G +IH+ FD FV+ L ++YAK L LA VF +
Sbjct: 247 FTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVF-DTS 305
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
L D +++ LI G++Q E++ LF +M GL V+F L A A++ G++
Sbjct: 306 LRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKE 365
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +++ F FVAN++LDFY+KC + + FD M DV SWN +I G+
Sbjct: 366 IHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGE 425
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
AI+L ++M + + ++ +L+ S +E G++ + G + + +
Sbjct: 426 LDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYAC 485
Query: 420 LVDMYAKCGRLNDARKVFDHL 440
+VD+ + G + +A ++ L
Sbjct: 486 MVDLLGRAGLMEEAAELIKGL 506
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 2/244 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
++ N L MY K + A+ +FD R+ +S++ LI G SQ +L+ F M
Sbjct: 278 DLFVSNALTDMYAKSGHLKLARNVFD-TSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQ 336
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
L+ + +++GA+SACA+ + GKEIHG + R ++ V+N L++ Y KCG +
Sbjct: 337 LMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIG 396
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ +FD ++ SW +++ Y GE + +F RK V S +VL AC+
Sbjct: 397 LARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACS 456
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWS 247
G L+ G + + +E + +++L + ++ A+ + + + PD W
Sbjct: 457 HGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWG 516
Query: 248 ALIG 251
AL+G
Sbjct: 517 ALLG 520
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 44/279 (15%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
FH ++ N LL Y K RI A+ +FD M ++V SW+ +I G+ +G + A++ F
Sbjct: 375 FHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFE 434
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M +E + +++ +SAC+ G G++ + G+E C++++ G+ G
Sbjct: 435 NMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAG 494
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L+ A E + GL I + G ++LG
Sbjct: 495 LMEEA-------------------------AELIKGLPIVPDANIWG---------ALLG 520
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS-----NIQL 240
AC + GNL++ +F+ E + + L N+YA+ + D A+R+ ++
Sbjct: 521 ACRIYGNLELAAWAAEHLFELKPEHSGYYTL-LSNMYAETGRWDEANRIRELMKSRGVKK 579
Query: 241 PDLTAWSALIGGYAQ---LGKACEAIDLFVKMFSSGLMP 276
+W IG A +G+ E +DL + F S +P
Sbjct: 580 SPGCSW-VQIGEQAHAFVVGEKIEGLDLGLWPFKSKAVP 617
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/606 (33%), Positives = 327/606 (53%), Gaps = 15/606 (2%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ PN YT+ A+ AC++ D G+ IH +GL+ + VS L++MY KC L A
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL- 190
+F R+ ++W ++L+ Y G + H + LLS + + + ++++ +L
Sbjct: 66 HIFATMPARDLVAWNAMLAGYAHHGMYHHAVA-HLLSMQMQMHRLRPNASTLVALLPLLA 124
Query: 191 --GNLKVGMQIHSLVFKCALEFDK----------FVAMGLINLYAKCEKLDLASRVFSNI 238
G L G +H+ + L ++ + L+++YAKC L A RVF +
Sbjct: 125 QQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM 184
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGG 297
+ WSALIGG+ + +A LF M + GL S + + L A A + G
Sbjct: 185 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG 244
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
QLH+L+ K G + N++L Y+K L+++++ FDEM D VS++AL++G++ +
Sbjct: 245 EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN 304
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA + K M P+ T +++ S + A++ G+ +H ++ G S I
Sbjct: 305 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 364
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL+DMYAKCGR++ +R+VF+ + S+++VSWNTM+ GY HGLG+EA ++ M
Sbjct: 365 NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFP 424
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ TFI +LSAC H GLV EG H+F+ M +G++PRM+H +V L + G AYE
Sbjct: 425 PDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYE 484
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FI+S P+ + VW LL C+ +K++ LG+ + I PE T ++LSN+Y+ A
Sbjct: 485 FIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGR 544
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
+DE A+VR I K + KK GCSW E+ +H F + Q +++ ++ + V +
Sbjct: 545 FDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKK 604
Query: 658 GGYVPD 663
GY PD
Sbjct: 605 LGYQPD 610
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 239/494 (48%), Gaps = 29/494 (5%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +G ++ LL MYVK + + DA +F MP R++++W+A+++G++ GM A+
Sbjct: 37 IHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAV 96
Query: 62 NYFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH------- 112
+ M + L PN T V + A +G G +H R+ L N +
Sbjct: 97 AHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTD 156
Query: 113 ---VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
+ L++MY KCG L A+ VFDA RN ++W +L+ + C +F
Sbjct: 157 GVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAML 216
Query: 170 KSGVA-ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
G+ +S S AS L ACA L +L++G Q+H+L+ K + D L+++YAK +
Sbjct: 217 AQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLI 276
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
D A +F + + D ++SAL+ GY Q G+A EA +F KM + + P T ++ A
Sbjct: 277 DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 336
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ + GR H +I G +S T + N ++D Y+KC ++ S + F+ M D+VSWN
Sbjct: 337 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWN 396
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THC 403
+IAG+ EA L +M G P+ T+ +L+ S + GK H
Sbjct: 397 TMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHG 456
Query: 404 CIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG----YAQHG 459
+ P + + +VD+ ++ G L++A + + + V L+G Y
Sbjct: 457 YGLTPRMEHYIC----MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNID 512
Query: 460 LGREALEIYSMMQE 473
LG+ ++ M+QE
Sbjct: 513 LGK---KVSRMIQE 523
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 141/302 (46%), Gaps = 15/302 (4%)
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M + P+ TF + L A + + + GR +H I G + FV+ +LD Y KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH--CPNLYTYSNIL 386
L ++ F M D+V+WNA++AG+ Y A+ L M + H PN T +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSN----------VVIGSALVDMYAKCGRLNDARKV 436
+ + A+ G H ++ N V++G+AL+DMYAKCG L AR+V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGL 495
FD + ++N V+W+ ++ G+ +A ++ +M+ + + + L AC +
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+ G ++++ G+ + S++ ++A G +A ++ + V + L+
Sbjct: 241 LRMG-EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALV 298
Query: 556 SG 557
SG
Sbjct: 299 SG 300
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G N L+ MY K RI+ ++++F+ MP R+++SW+ +I+G+ G+ + A
Sbjct: 352 VIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEA 411
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE-IHGRMYRSGLELNSHVSNCLIN 119
F M P+ T++ +SAC+ G GK H + GL C+++
Sbjct: 412 TALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVD 471
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ + G L A +F+ L + WV+LL +
Sbjct: 472 LLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 187/568 (32%), Positives = 315/568 (55%), Gaps = 4/568 (0%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
C+ R G +H + ++G + + +SN ++NMY KCG + A+ VFD E+N +SW
Sbjct: 13 CSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSW 72
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+++S Y Q GE + ++ + + +E+ ASV+ ACA L + +G +IHS K
Sbjct: 73 SAMISGYDQAGEPQMAIDLY---SQMFLVPNEYVFASVISACASLSAVTLGQKIHSRSLK 129
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
E FV+ LI++Y KC + A VF+N P+ +++ALI G+ + + ++
Sbjct: 130 FGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEF 189
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F M GL+P F VLG + G +LH +K+ S F+ N ++ YS+
Sbjct: 190 FKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSE 249
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSN 384
L++E+ K F ++E DV+SWN LIA + + + + K M E + P+ +T+++
Sbjct: 250 LNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTS 309
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
L + + ++ GKQ H +++ ++ +G+ALV+MYAKCG + A +F + N
Sbjct: 310 ALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHN 369
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
LVSWNT++ G+ HGLG A+E++ M + I+P+ TFIG+L+AC H GLV++G YFN
Sbjct: 370 LVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFN 429
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
SM +GI+P ++H + ++ + G+ A E+++ P + VV LLS + H D+
Sbjct: 430 SMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDV 489
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
V+G A+ +L P TS +++LSN+YA MWD A+ RK +K LKK+ G S E+
Sbjct: 490 VIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEV 549
Query: 625 QNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
+ F+ F + ++ ++ LS
Sbjct: 550 NGSVEKFTIGDFTHLRIKEIKGILKTLS 577
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 229/438 (52%), Gaps = 7/438 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G +V NH+L MY K A+++FDEM E+N++SWSA+ISG+ Q G P++A
Sbjct: 29 VLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMA 88
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ + M L PN Y + +SACAS G++IH R + G E S VSN LI+M
Sbjct: 89 IDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISM 145
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC S A VF + E N +S+ +L++ + + + GL+ F L R+ G+ F+
Sbjct: 146 YMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAF 205
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
VLG C NLK G ++H K L+ F+ +I +Y++ + A + F I+
Sbjct: 206 MGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEE 265
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +W+ LI + + + +F M + + P + TF+ L A A + G+Q
Sbjct: 266 KDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQ 325
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ +++ V N +++ Y+KC + + F +M H++VSWN +IAG +
Sbjct: 326 IHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAG-FGNHG 384
Query: 360 YGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIG 417
GE A+EL + M G P+ T+ +L + ++ G+ + + G ++
Sbjct: 385 LGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHF 444
Query: 418 SALVDMYAKCGRLNDARK 435
S L+DM + GRLN+A +
Sbjct: 445 SCLIDMLGRAGRLNEAEE 462
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 208/400 (52%), Gaps = 19/400 (4%)
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +S+L C+ L+ G+ +H+ V K + D F++ ++N+YAKC A +VF +
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+L +WSA+I GY Q G+ AIDL+ +MF L+P+E F+ V+ A A + G+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++HS +K G+ S +FV+N+++ Y KC ++L F E + VS+NALI G + +
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+E K M +G P+ + + +L I + ++ G + HC VK DS IG+
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS-MMQENKIK 477
++ MY++ + +A K F + K+++SWNT++ + + L ++ M +E ++
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIR-----DHGISPRMDHIASVVHLFACRGQT 532
P+D TF L+AC + + G ++R D G+ ++V+++A G
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVG------NALVNMYAKCGCI 355
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
AY+ I S + N V W +++G H LG A E
Sbjct: 356 GYAYD-IFSKMVHHNLVSWNTIIAGFGNHG---LGERAVE 391
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/618 (32%), Positives = 330/618 (53%), Gaps = 41/618 (6%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF---------- 132
+ C + D +GK +H +S + +++ SN I +Y KCG L+ A+
Sbjct: 15 LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74
Query: 133 ---------------------VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
+FD E + +S+ +L+S+Y CGE L +F R+
Sbjct: 75 FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREM 134
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM--GLINLYAKCEKLD 229
G+ + F+ ++V+ AC ++ + Q+HS+ FD +V++ L+ Y K LD
Sbjct: 135 GLDMDGFTLSAVITACC--DDVGLIGQLHSVAVSSG--FDSYVSVNNALLTYYGKNGDLD 190
Query: 230 LASRVFSNIQ-LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
A RVF + + D +W+++I Y Q + +A+ LF +M GL T + VL AF
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL-LEESLKTFDEMDEHDVVSW 347
+++ GG Q H +IK GF + V + ++D YSKC + + K F+E+ E D+V W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310
Query: 348 NALIAGHLASCHYGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
N +++G+ + + E A+E + M G+ PN ++ +++ S++ + GKQ H +
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370
Query: 407 KPGFDSN-VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
K SN + + +AL+ MY+KCG L DAR++FD ++ N VS N+M+ GYAQHG+ E+L
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
++ M E +I P TFI VLSAC H G VEEGW+YFN M I P +H + ++ L
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
G+ A I P P + W LL C+TH ++ L AA ++L +P + + +
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPY 550
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLH 645
++LSN+YA A W+E A VRK M+++ +KK GCSW E++ ++H F + +++
Sbjct: 551 VVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIY 610
Query: 646 EVMNQLSVHLFDGGYVPD 663
E + ++S + GYVPD
Sbjct: 611 EFLEEMSGKMKRAGYVPD 628
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 265/548 (48%), Gaps = 20/548 (3%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
PNV ++N ++ Y K SR A +LFD++PE +++S++ LIS ++ G AL F M
Sbjct: 72 PNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGM 131
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
L+ + +T ++AC D ++H SG + V+N L+ YGK G L
Sbjct: 132 REMGLDMDGFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDL 189
Query: 128 SSAQFVF-DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
A+ VF R+ +SW S++ +Y Q E L +F + G+ + F+ ASVL A
Sbjct: 190 DDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTA 249
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC-EKLDLASRVFSNIQLPDLTA 245
L +L G+Q H + K + V GLI+LY+KC + +VF I PDL
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309
Query: 246 WSALIGGYAQLGKACE-AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+ ++ GY+Q + E A++ F +M G P++ +F V+ A +++ G+Q+HSL
Sbjct: 310 WNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369
Query: 305 IKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+K S V N ++ YSKC L+++ + FD M EH+ VS N++IAG+ E+
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMES 429
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF--DSNVVIGSALV 421
+ L + ML P T+ ++L+ + +E G + ++K F + S ++
Sbjct: 430 LHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG-WNYFNMMKEKFNIEPEAEHYSCMI 488
Query: 422 DMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
D+ + G+L++A + + + + W ++L H G L + + Q +++P++
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTH--GNIELAVKAANQVLQLEPSN 546
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD----HIASVVHLFACRGQT---- 532
VLS E +RD G+ + + +H+F +
Sbjct: 547 AAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMI 606
Query: 533 RRAYEFIK 540
+ YEF++
Sbjct: 607 KEIYEFLE 614
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 199/413 (48%), Gaps = 37/413 (8%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI---- 238
+L C +L G +HSL K + + + I LY+KC +L A + F +I
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 239 ---------------------QL------PDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
QL PDL +++ LI YA G+ A+ LF M
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
GL T S V+ A D IG QLHS+ + GF S+ V N +L +Y K L++
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 332 SLKTFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
+ + F M D VSWN++I + +A+ L ++M+ G +++T +++L +
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC-GRLNDARKVFDHLSSKNLVSWN 449
+ + G Q H ++K GF N +GS L+D+Y+KC G ++D RKVF+ ++ +LV WN
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWN 311
Query: 450 TMLVGYAQH-GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
TM+ GY+Q+ +ALE + MQ +PND +F+ V+SAC ++ +G + ++
Sbjct: 312 TMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALK 371
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
S R+ +++ +++ G + A E N V +++G H
Sbjct: 372 SDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHNTVSLNSMIAGYAQH 423
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 151/292 (51%), Gaps = 4/292 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE-RNVISWSALISGFSQIGMPEVA 60
++SGF V N LL Y K ++DA+++F M R+ +SW+++I + Q A
Sbjct: 165 VSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKA 224
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ MV L + +T ++A D G + HG++ ++G NSHV + LI++
Sbjct: 225 LGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDL 284
Query: 121 YGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH-GLKIFLLSRKSGVAISEF 178
Y KC G +S + VF+ E + + W +++S Y Q E + L+ F + G ++
Sbjct: 285 YSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDC 344
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF-VAMGLINLYAKCEKLDLASRVFSN 237
S V+ AC+ L + G QIHSL K + ++ V LI +Y+KC L A R+F
Sbjct: 345 SFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDR 404
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
+ + + +++I GYAQ G E++ LF M + P+ +TF VL A A
Sbjct: 405 MAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACA 456
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 144/286 (50%), Gaps = 12/286 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSR-INDAQKLFDEMPERNVISWSALISGFSQ-IGMPE 58
+I +GFH N + L+ +Y K ++D +K+F+E+ E +++ W+ ++SG+SQ E
Sbjct: 266 LIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLE 325
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCL 117
AL FR M PN ++V +SAC++ GK+IH +S + N V N L
Sbjct: 326 DALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNAL 385
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
I MY KCG L A+ +FD E N++S S+++ Y Q G + L +F + +A +
Sbjct: 386 IAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTS 445
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ SVL ACA G ++ G +++ F E + + M I+L + KL A +
Sbjct: 446 ITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCM--IDLLGRAGKLSEAENL 503
Query: 235 FSNIQL-PDLTAWSALIGG---YAQLGKACEAIDLFVKMFSSGLMP 276
+ + P W++L+G + + A +A + +++ S P
Sbjct: 504 IARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 150/324 (46%), Gaps = 49/324 (15%)
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
F ++L ++ G+ LHSL IK T+ +N + YSKC L + K F ++
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG-HCPNLYTYSNILNISSD----IPAI 395
+ +V S+NA+IA + E+ L+ LF+ P+L +Y+ +++ +D PA+
Sbjct: 71 DPNVFSFNAIIAAYAK-----ESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPAL 125
Query: 396 -------EWG----------------------KQTHCCIVKPGFDSNVVIGSALVDMYAK 426
E G Q H V GFDS V + +AL+ Y K
Sbjct: 126 GLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK 185
Query: 427 CGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
G L+DA++VF + ++ VSWN+M+V Y QH G +AL ++ M + + T
Sbjct: 186 NGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLAS 245
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRG---QTRRAYEFIKS 541
VL+A + + G + +I+ G + ++ L++ C G R+ +E I
Sbjct: 246 VLTAFTCLEDLSGGLQFHGQLIKT-GFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEI-- 302
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLV 565
EP+ V+W ++SG +++ +
Sbjct: 303 --TEPDLVLWNTMVSGYSQNEEFL 324
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 196/630 (31%), Positives = 332/630 (52%), Gaps = 2/630 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG +V N L+ Y DA+++FDEMP R+V+SW++L+S F M + A
Sbjct: 103 LRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDAR 162
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
M+ + N + V V AC + G +HG + ++GL+ ++ N L++MY
Sbjct: 163 QALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMY 222
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
GK G + ++ VF+ ERN +SW S + + G + L +F + G + +
Sbjct: 223 GKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLS 282
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L A LG +G ++H K A+E D FVA L+++YAK L+ A VF I++
Sbjct: 283 SLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVR 342
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ +W+A+I Q G EA L +KM G P+ +T +L A + + G+Q+H
Sbjct: 343 NVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIH 402
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ I+ G F++N ++D Y+KC L + FD + E D VS+N LI G+ S
Sbjct: 403 AWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-LSEKDDVSYNTLILGYSQSPWSF 461
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
E++ L K + G + ++ L +++ + + GK+ H +V+ ++ + + L+
Sbjct: 462 ESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLL 521
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
+Y K G L+ A K+F+ + K++ SWN M++GY HG A ++ +M+++ + +
Sbjct: 522 GLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHV 581
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
++I VLS C H GLVE G YF+ M+ + + P+ H A +V L GQ + E I
Sbjct: 582 SYIAVLSVCSHGGLVERGKKYFSHMLAQN-LEPQQMHYACMVDLLGRSGQLTESVEIILD 640
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P N VW LL C+ H ++ L +YAA+ + PE + + +L N+YAEA W+E
Sbjct: 641 MPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEHSGYYSVLRNMYAEAGRWNEA 700
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
K+R +MK + ++K+ SW + NK+ F
Sbjct: 701 HKIRTLMKSRKVQKNPAYSWVQSGNKLQAF 730
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 134/416 (32%), Positives = 222/416 (53%), Gaps = 5/416 (1%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
G E+H RSG + N L+ Y CG A+ VFD R+ +SW SL+SS+
Sbjct: 95 GLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLA 154
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
+ L +SGV ++ S SV+ AC V G+ +H LV K L D V
Sbjct: 155 NKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGL--DSIV 212
Query: 215 AMG--LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
+G L+++Y K ++ + +VF + + +W++ IG + G + + LF M
Sbjct: 213 NLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSER 272
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G MP +T S +L A ++ GR++H IK FVAN+++D Y+K LE++
Sbjct: 273 GFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKA 332
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
F++++ +VVSWNA+IA + + EA L+ M +G CPN T N+L S +
Sbjct: 333 CAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRM 392
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+++ GKQ H ++ G ++ I +AL+DMYAKCG+L A+ +FD LS K+ VS+NT++
Sbjct: 393 ASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-LSEKDDVSYNTLI 451
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+GY+Q E+L ++ + I+ + +F+G L+AC ++ ++G ++R
Sbjct: 452 LGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVR 507
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 244/488 (50%), Gaps = 4/488 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G V N L+ MY KF + + K+F+ MPERN +SW++ I F G+
Sbjct: 203 VLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDV 262
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M P T + A G G+E+HG + +EL+ V+N L++M
Sbjct: 263 LALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDM 322
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A VF+ RN +SW +++++ Q G + + +K G + +
Sbjct: 323 YAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITL 382
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++L AC+ + +LK G QIH+ + L FD F++ LI++YAKC +L LA +F ++
Sbjct: 383 VNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF-DLSE 441
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +++ LI GY+Q + E+++LF ++ S G+ ++F L A ++ G+++
Sbjct: 442 KDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEI 501
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H ++++ S+ F+ANT+L Y+K +L+ + K F+ + E DV SWN +I G+
Sbjct: 502 HGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQI 561
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A L M G + +Y +L++ S +E GK+ ++ + + + +
Sbjct: 562 DAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACM 621
Query: 421 VDMYAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
VD+ + G+L ++ + + D N W +L H G L Y+ ++KP
Sbjct: 622 VDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIH--GNIELAQYAADHLFELKPE 679
Query: 480 DNTFIGVL 487
+ + VL
Sbjct: 680 HSGYYSVL 687
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 174/367 (47%), Gaps = 13/367 (3%)
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G+++H+ + D F L+ YA C A RVF + D+ +W++L+ +
Sbjct: 95 GLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLA 154
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
+A + M SG+ + + V+ A +E G +H L++K G S +
Sbjct: 155 NKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNL 214
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
N ++D Y K +E S+K F+ M E + VSWN+ I L + YG+ + L + M G
Sbjct: 215 GNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGF 274
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P T S++L ++ + G++ H +K + ++ + ++LVDMYAK G L A
Sbjct: 275 MPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACA 334
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
VF+ + +N+VSWN M+ Q+G EA + MQ++ PN T + +L AC +
Sbjct: 335 VFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMAS 394
Query: 496 VEEG-----WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
++ G W ++ D IS +++ ++A GQ R A S E + V
Sbjct: 395 LKTGKQIHAWSIRTGLMFDLFISN------ALIDMYAKCGQLRLAQSIFDLS--EKDDVS 446
Query: 551 WRCLLSG 557
+ L+ G
Sbjct: 447 YNTLILG 453
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 202/614 (32%), Positives = 321/614 (52%), Gaps = 3/614 (0%)
Query: 11 ITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC 70
+ N L+ MY K + A ++FD+M ++ ISW+ +++G+ G L M
Sbjct: 263 VVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRK 322
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
++ N + V +V A D GKE+H + G+ + V+ +++MY KCG L A
Sbjct: 323 HIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKA 382
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
+ F + R+ + W + LS+ Q G L IF + G+ + +S++ ACA +
Sbjct: 383 KEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEI 442
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
+ ++G +H V K + D VA L+++Y +C+ A +F+ + D+ AW+ LI
Sbjct: 443 SSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLI 502
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
G+ + G A+++F+++ SG+ P T +L A A + + G H IIK G
Sbjct: 503 NGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIE 562
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEH--DVVSWNALIAGHLASCHYGEAIELLK 368
S V ++D Y+KC L + F +++H D VSWN +IAG+L + EAI
Sbjct: 563 SEMHVKVALIDMYAKCGSLCTAENLF-HLNKHVKDEVSWNVMIAGYLHNGCANEAISTFN 621
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M E PNL T+ IL S + + H CI++ GF S+ +IG++L+DMYAK G
Sbjct: 622 QMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSG 681
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+L+ + K F + +K +SWN ML GYA HG G AL ++S+MQE + + ++I VLS
Sbjct: 682 QLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLS 741
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H GL++EG + F SM H + P M+H A +V L C G I P EP+
Sbjct: 742 ACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDA 801
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
VW LL CK H ++ LG A +L +P + +I+LS++YA+ W + + R M
Sbjct: 802 QVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQCGRWIDARRTRSNM 861
Query: 609 KEKSLKKDTGCSWT 622
+ LKK+ G SW
Sbjct: 862 TDHGLKKNPGYSWV 875
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 172/601 (28%), Positives = 305/601 (50%), Gaps = 11/601 (1%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF-RLMVCCVLEP 74
L+ MY K +++A+K+FD+MP ++V SW+A+ISG SQ P AL F R+ + +EP
Sbjct: 168 LVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEP 227
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
+ + + A + D S K IHG + R + VSN LI+MY KCG + A +F
Sbjct: 228 DSVSILNLAPAVSRLEDVDSCKSIHGYVVRRC--VFGVVSNSLIDMYSKCGEVKLAHQIF 285
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D ++ ISW ++++ Y G + L++ ++ + +++ S + + A +L+
Sbjct: 286 DQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLE 345
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G ++H+ + + D VA ++++YAKC +L A F +++ DL WSA +
Sbjct: 346 KGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALV 405
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q G EA+ +F +M GL P + S ++ A A++ + G+ +H +IK S
Sbjct: 406 QAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDIS 465
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
VA T++ Y++C+ ++ F+ M DVV+WN LI G A+E+ + G
Sbjct: 466 VATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSG 525
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P+ T ++L+ + + + G H I+K G +S + + AL+DMYAKCG L A
Sbjct: 526 VQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAE 585
Query: 435 KVFDHLSS--KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
+F HL+ K+ VSWN M+ GY +G EA+ ++ M+ ++PN TF+ +L A +
Sbjct: 586 NLF-HLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSY 644
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
+ ++ E + +IR IS + S++ ++A GQ + + + W
Sbjct: 645 LSILREAMAFHACIIRMGFISSTLIG-NSLIDMYAKSGQLSYSEKCFHEME-NKGTISWN 702
Query: 553 CLLSGCKTH--KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
+LSG H ++ L ++ + P D+ ++I + + A + E + + M E
Sbjct: 703 AMLSGYAMHGQGEVALALFSLMQETHV-PVDSVSYISVLSACRHAGLIQEGRNIFQSMTE 761
Query: 611 K 611
K
Sbjct: 762 K 762
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 272/520 (52%), Gaps = 6/520 (1%)
Query: 40 NVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIH 99
++I W++LI +S++ + + A+ ++ M LEP+ YT+ + AC D G IH
Sbjct: 91 SLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIH 150
Query: 100 GRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHV 159
+ LE + + L++MY K G L +A+ VFD ++ SW +++S Q
Sbjct: 151 QDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPC 210
Query: 160 HGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS-LVFKCALEFDKFVAMG 217
L+IF + + GV S ++ A + L ++ IH +V +C V+
Sbjct: 211 EALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVF---GVVSNS 267
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
LI++Y+KC ++ LA ++F + + D +W+ ++ GY G E + L +M + +
Sbjct: 268 LIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMN 327
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
+++ + A + ++ G+++H+ +++G +S VA ++ Y+KC L+++ + F
Sbjct: 328 KISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFL 387
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
++ D+V W+A ++ + + + GEA+ + ++M EG P+ S++++ ++I +
Sbjct: 388 SLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRL 447
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
GK HC ++K S++ + + LV MY +C A +F+ + K++V+WNT++ G+ +
Sbjct: 448 GKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTK 507
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
G R ALE++ +Q + ++P+ T + +LSAC + + G + ++I++ GI M
Sbjct: 508 CGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKN-GIESEMH 566
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+++ ++A G A + ++V W +++G
Sbjct: 567 VKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAG 606
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 235/468 (50%), Gaps = 8/468 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +++ ++ MY K + A++ F + R+++ WSA +S Q G P AL+ F
Sbjct: 358 GMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIF 417
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M L+P+ VSACA +R GK +H + ++ + + V+ L++MY +C
Sbjct: 418 QEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRC 477
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
A +F+ ++ ++W +L++ + +CG+ L++FL + SGV + S+L
Sbjct: 478 KSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLL 537
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS-NIQLPDL 243
ACA+L +L +G+ H + K +E + V + LI++YAKC L A +F N + D
Sbjct: 538 SACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDE 597
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+ +I GY G A EAI F +M + P+ VTF +L A + + H+
Sbjct: 598 VSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHAC 657
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
II+MGF S T + N+++D Y+K L S K F EM+ +SWNA+++G+ A GE
Sbjct: 658 IIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGY-AMHGQGEV 716
Query: 364 IELLKDMLFEGHCP-NLYTYSNILNISSDIPAIEWGKQTHCCIV-KPGFDSNVVIGSALV 421
L ++ E H P + +Y ++L+ I+ G+ + K + ++ + +V
Sbjct: 717 ALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMV 776
Query: 422 DMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG---LGREAL 465
D+ G ++ + D + ++ + W +L H LG AL
Sbjct: 777 DLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIAL 824
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 170/343 (49%), Gaps = 10/343 (2%)
Query: 218 LINLYAK--CEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L+ ++A+ ++ LA +N P L W++LI Y++L EAI + M GL
Sbjct: 68 LLQIHARLIVQQCTLAPNSITN---PSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLE 124
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P + TF++VL A + G +H I F+ ++D Y K L+ + K
Sbjct: 125 PDKYTFTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKV 184
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM-LFEGHCPNLYTYSNILNISSDIPA 394
FD+M DV SWNA+I+G S + EA+E+ + M + EG P+ + N+ S +
Sbjct: 185 FDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLED 244
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
++ K H +V+ V+ ++L+DMY+KCG + A ++FD + K+ +SW TM+ G
Sbjct: 245 VDSCKSIHGYVVRRCVFG--VVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAG 302
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
Y HG E L++ M+ IK N + + + A +E+G N ++ G++
Sbjct: 303 YVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQ-LGMTS 361
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ +V ++A G+ ++A EF S + VVW LS
Sbjct: 362 DIVVATPIVSMYAKCGELKKAKEFFLSLE-GRDLVVWSAFLSA 403
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 42/242 (17%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF + + N L+ MY K +++ ++K F EM + ISW+A++SG++ G EVA
Sbjct: 658 IIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVA 717
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY-RSGLELNSHVSNCLIN 119
L F LM + + +Y+ +SAC G + G+ I M + LE + C+++
Sbjct: 718 LALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVD 777
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+ G GL + D E ++ W
Sbjct: 778 LLGCAGLFDEVLCLIDKMPTEPDAQVW--------------------------------- 804
Query: 179 SCASVLGACAVLGNLKVG-MQIHSLVFKCALEFDKFVA-MGLINLYAKCEKLDLASRVFS 236
++LGAC + N+K+G + +H L+ LE V + L ++YA+C + A R S
Sbjct: 805 --GALLGACKMHSNVKLGEIALHHLL---KLEPRNAVHYIVLSDIYAQCGRWIDARRTRS 859
Query: 237 NI 238
N+
Sbjct: 860 NM 861
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 209/706 (29%), Positives = 341/706 (48%), Gaps = 80/706 (11%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M++ GF N +L M++K R++ A++ F+E+ ++V W+ ++SG++ G + A
Sbjct: 216 MLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKA 275
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M ++P+ T+ +S A G + M GL+
Sbjct: 276 LKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEM--GGLK------------ 321
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ N +SW +L++ Q G L +F GV + +
Sbjct: 322 ----------------DFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITI 365
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
AS + AC L L+ G +IH K L+ D V L++ YAKC +++A R F I+
Sbjct: 366 ASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIK 425
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDL---------------------------------- 265
DL +W+A++ GYA G EAI+L
Sbjct: 426 QTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALE 485
Query: 266 -FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
F +M S G+ P+ T S L A V+ G+++H +++ T V + ++ YS
Sbjct: 486 FFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYS 545
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
C+ LE + F E+ DVV WN++I+ S A++LL++M N T +
Sbjct: 546 GCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVS 605
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
L S + A+ GK+ H I++ G D+ I ++L+DMY +CG + +R++FD + ++
Sbjct: 606 ALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRD 665
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
LVSWN M+ Y HG G +A+ ++ + +KPN TF +LSAC H GL+EEGW YF
Sbjct: 666 LVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFK 725
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
M ++ + P ++ A +V L + GQ EFI+ P EPN VW LL C+ H +
Sbjct: 726 MMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNP 785
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
L YAA + +P+ + +++++N+Y+ A W++ AK+R +MKE+ + K GCSW E+
Sbjct: 786 DLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEV 845
Query: 625 QNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL----FD---GGYVPD 663
+ K+H F G H +M Q+S + FD GYVPD
Sbjct: 846 KRKLHSFVV-------GDTSHPLMEQISAKMESLYFDIKEIGYVPD 884
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 166/661 (25%), Positives = 308/661 (46%), Gaps = 105/661 (15%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
+ LL +Y + + DA+++FD+M ERNV SW+A++ + +G E + F LMV +
Sbjct: 128 SRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVR 187
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+++ + AC+ + R GK+++ M G E NS V +++M+ KCG + A+
Sbjct: 188 PDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRF 247
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ ++ W ++S Y GE LK + SGV + + +++ A G
Sbjct: 248 FEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQ- 306
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
F+ A ++ F+ MG + + P++ +W+ALI G
Sbjct: 307 ----------FEEASKY--FLEMGGLKDFK-----------------PNVVSWTALIAGS 337
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM-GFSSF 312
Q G EA+ +F KM G+ P+ +T + + A ++ GR++H IK+ S
Sbjct: 338 EQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSD 397
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V N+++D+Y+KC +E + + F + + D+VSWNA++AG+ + EAIELL +M F
Sbjct: 398 LLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKF 457
Query: 373 EGHCPNLYTYS-----------------------------NILNISSDIPA------IEW 397
+G P++ T++ N IS + A ++
Sbjct: 458 QGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKL 517
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
GK+ H +++ + + +GSAL+ MY+ C L A VF LS++++V WN+++ AQ
Sbjct: 518 GKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQ 577
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG--WHYF------------ 503
G AL++ M + ++ N T + L AC + + +G H F
Sbjct: 578 SGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFI 637
Query: 504 -NSMIRDHG-------------ISPRMDHIA--SVVHLFACRGQTRRA---YEFIKSSPI 544
NS+I +G + P+ D ++ ++ ++ G A ++ ++ +
Sbjct: 638 LNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGL 697
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILST----DPEDTSAHIMLSNVYAEANMWDE 600
+PN + + LLS C +H L+ + K++ T DP + + ++ + A ++E
Sbjct: 698 KPNHITFTNLLSAC-SHSGLIEEGWKYFKMMKTEYAMDPA-VEQYACMVDLLSRAGQFNE 755
Query: 601 T 601
T
Sbjct: 756 T 756
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 224/461 (48%), Gaps = 45/461 (9%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y + C + R G ++H ++ +G+++ + + L+ +Y + G + A+ +FD
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
ERN SW +++ YC G++ +K+F L GV F V AC+ L N +VG
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
++ + E + V +++++ KC ++D+A R F I+ D+ W+ ++ GY G+
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
+A+ M SG+ P +VT+ N
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTW-----------------------------------NA 296
Query: 319 VLDFYSKCELLEESLKTFDEMD-----EHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
++ Y++ EE+ K F EM + +VVSW ALIAG + + EA+ + + M+ E
Sbjct: 297 IISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHC-CIVKPGFDSNVVIGSALVDMYAKCGRLND 432
G PN T ++ ++ +++ + G++ H CI DS++++G++LVD YAKC +
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
AR+ F + +LVSWN ML GYA G EA+E+ S M+ I+P+ T+ G+++
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQ 476
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
G + +F M G+ P I+ L AC GQ R
Sbjct: 477 YGDGKAALEFFQRM-HSMGMDPNTTTISGA--LAAC-GQVR 513
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 137/280 (48%), Gaps = 13/280 (4%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G Q+H+ ++ G F+ + +L+ Y + +E++ + FD+M E +V SW A++ +
Sbjct: 108 GFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCG 167
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
Y E I+L M+ EG P+ + + + S++ GK + ++ GF+ N +
Sbjct: 168 LGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCV 227
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+++DM+ KCGR++ AR+ F+ + K++ WN M+ GY G ++AL+ S M+ + +
Sbjct: 228 KGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGV 287
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+ T+ ++S G EE YF M G+ ++ S L A G + Y
Sbjct: 288 KPDQVTWNAIISGYAQSGQFEEASKYFLEM---GGLKDFKPNVVSWTALIA--GSEQNGY 342
Query: 537 EFIKSS--------PIEPNKVVWRCLLSGCKTHKDLVLGR 568
+F S ++PN + +S C L GR
Sbjct: 343 DFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGR 382
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 11/248 (4%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y++IL + + G Q H +V G D +GS L+++Y + G + DAR++FD +S
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
+N+ SW ++ Y G E ++++ +M ++P+ F V AC + G
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRCLLSGC 558
++ M+ G S++ +F G+ RR +E I+ + +W ++SG
Sbjct: 212 VYDYML-SIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDV----FMWNIMVSGY 266
Query: 559 KTHKDL--VLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
+ + L + K+ P+ + + ++S YA++ ++E +K M K
Sbjct: 267 TSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEEASKYFLEMGGLKDFKP 325
Query: 617 TGCSWTEL 624
SWT L
Sbjct: 326 NVVSWTAL 333
>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
Length = 963
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 208/641 (32%), Positives = 347/641 (54%), Gaps = 45/641 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG ++ + L+ + + I++A+ +F + E+N ++ + LI G + E A
Sbjct: 300 VLKSGCSSDLYVGSALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEA 359
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACAS----RGDARSGKEIHGRMYRSGL-ELNSHVSN 115
+ F + + N TYV +SA A R GKE HG M R+GL +L VSN
Sbjct: 360 VKIF-VGTRNTIVVNADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSN 418
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
L+NMY KCG + SA +F + ISW +++S+ Q +GLK+
Sbjct: 419 GLVNMYAKCGAIDSASKIFQLMEATDRISWNTIISALDQ-----NGLKL----------- 462
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
L G Q+H K L+ D V+ L+ +Y +C + +VF
Sbjct: 463 -----------------LSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVF 505
Query: 236 SNIQLPDLTAWSALIGGYAQ-LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
+++ D +W++++G A E +++F M GL+P++VTF +L A + +
Sbjct: 506 NSMADHDEVSWNSMMGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVL 565
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
G+Q H+ ++K G V N ++ Y+K + F M D VSWN++I+G
Sbjct: 566 ELGKQFHAAVLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISG 625
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
++ + + EA++ + ML G + T+S ILN + + A+E G + H ++ +S+
Sbjct: 626 YIYNGYLQEAMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGMEMHAFGIRSHLESD 685
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
VV+ SALVDMY+KCGR++ A K+F+ ++ +N SWN+M+ GYA+HGLGR+ALE + M
Sbjct: 686 VVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKALETFEEMLR 745
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
++ P+ TF+ VLSAC H GLVE G YF M+ DHGI P+++H + V+ L G+
Sbjct: 746 SRESPDHVTFVSVLSACSHAGLVERGLEYFE-MMPDHGILPQIEHYSCVIDLLGRAGKID 804
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKD---LVLGRYAAEKILSTDPEDTSAHIMLSN 590
+ E+I+ P++PN ++WR +L C+ KD + LGR A +L +P++ +++ SN
Sbjct: 805 KIKEYIQRMPMKPNALIWRTVLVACRQSKDGSKIELGREALRVLLEIEPQNPVNYVLASN 864
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+A MW++TAK R M++ ++KK+ G SWT L ++ F
Sbjct: 865 FHAATGMWEDTAKARAGMRQATVKKEAGRSWTYLGIQIFRF 905
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/575 (26%), Positives = 282/575 (49%), Gaps = 53/575 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G + ++ NHL+ Y K +R+ A ++FDEMP+RN +SW+ L+SG+ G+ E A
Sbjct: 86 LIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGITEEA 145
Query: 61 LNYFRLMVCCV---LEPNYYTYVGAVSACASRGDARSG--KEIHGRMYRSGLELNSHVSN 115
FR M+ V P +T+ + AC G R G ++HG + ++ N+ V N
Sbjct: 146 FRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYASNTTVCN 205
Query: 116 CLINMYGKC--GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
LI+MYG C G AQ VFD + R+ I+W +L+S Y + G+ V +F+ ++
Sbjct: 206 ALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDMQREDS 265
Query: 174 AI----SEFSCASVLGACAV-LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
I +E + S++ A ++ G+ V Q+ V K D +V L++ +A+ +
Sbjct: 266 RIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCSSDLYVGSALVSAFARHGLI 325
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
D A +F +++ + + LI G + + EA+ +FV ++ ++ ++ T+ +L A
Sbjct: 326 DEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIVVNAD-TYVVLLSAI 384
Query: 289 ADV---KETI-GGRQLHSLIIKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHD 343
A+ +E + G++ H +++ G + V+N +++ Y+KC ++ + K F M+ D
Sbjct: 385 AEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIFQLMEATD 444
Query: 344 VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHC 403
+SWN +I+ A++ + + + G+Q HC
Sbjct: 445 RISWNTIIS----------ALD-----------------------QNGLKLLSAGQQVHC 471
Query: 404 CIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML-VGYAQHGLGR 462
VK G D + + + LV MY +CG ++D KVF+ ++ + VSWN+M+ V +
Sbjct: 472 DAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGVMASSQAPIS 531
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
E +E+++ M + PN TF+ +L+A + ++E G F++ + HG+ ++
Sbjct: 532 ETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELG-KQFHAAVLKHGVMDDNVVDNAL 590
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ +A G + + V W ++SG
Sbjct: 591 ISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISG 625
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 230/504 (45%), Gaps = 30/504 (5%)
Query: 89 RGDARSGKE-IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVS 147
RGDA + E +H + + GL + +SN L+N Y K L++A VFD +RN++SW
Sbjct: 72 RGDAANSPENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTC 131
Query: 148 LLSSYCQCGEHVHGLKIF---LLSRKSGVAISEFSCASVLGACAVLGNLKVGM--QIHSL 202
LLS Y G ++F L + G + F+ ++L AC G ++G Q+H L
Sbjct: 132 LLSGYVLQGITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGL 191
Query: 203 VFKCALEFDKFVAMGLINLYAKCE--KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
+ K + V LI++Y C LA RVF + DL W+AL+ YA+ G
Sbjct: 192 LSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVV 251
Query: 261 EAIDLFVKMFSSG----LMPSEVTFSYVLGAFA-DVKETIGGRQLHSLIIKMGFSSFTFV 315
LF+ M L P+E TF ++ A + + Q+ ++K G SS +V
Sbjct: 252 STFTLFMDMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCSSDLYV 311
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL---KDMLF 372
+ ++ +++ L++E+ F + E + V+ N LI G + EA+++ ++ +
Sbjct: 312 GSALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIV 371
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF-DSNVVIGSALVDMYAKCGRLN 431
+ S I S + GK+ H +++ G D + + + LV+MYAKCG ++
Sbjct: 372 VNADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAID 431
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK-------PNDNTFI 484
A K+F + + + +SWNT++ Q+GL + L + + +K N +
Sbjct: 432 SASKIFQLMEATDRISWNTIISALDQNGL--KLLSAGQQVHCDAVKWGLDLDTSVSNVLV 489
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
+ C G + + W FNSM DH + + A +T + + +
Sbjct: 490 KMYGEC---GAMSDCWKVFNSMA-DHDEVSWNSMMGVMASSQAPISETVEVFNNMMRGGL 545
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGR 568
PNKV + LL+ L LG+
Sbjct: 546 IPNKVTFVNLLAALSPLSVLELGK 569
>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
Length = 917
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 191/593 (32%), Positives = 327/593 (55%), Gaps = 9/593 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ ++I N ++ MY RI++A F M ER+ ISW+ +ISG +Q G + A
Sbjct: 332 ILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEA 391
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ FR M+ + P+ +T++ + A +A+ E+ M SG+EL+ + + LINM
Sbjct: 392 VHLFRRMLAEGITPDKFTFISIIDGTARMQEAKILSEL---MVESGVELDVFLVSALINM 448
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ + G + A+ +FD +R+ + W S++SSY Q G L L R G+ ++F+
Sbjct: 449 HSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTL 508
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ L ACA L L G IHS + V LIN+YAKC L+ A VF
Sbjct: 509 VTALNACASLTALSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQCG- 567
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L +W+ + Y Q K EA+ LF +M GL +V+F VL + E G ++
Sbjct: 568 KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSASE---GSKI 624
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+++++ G S V+ +L+ Y+ + L+E+ + F M+ D+VSWNA+IAG
Sbjct: 625 HNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLS 684
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNI--SSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EAI++ + M EG P+ ++ +LN S +++ + I G++++ ++G+
Sbjct: 685 REAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGN 744
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
A+V M+ + GRL +AR+ F+ + ++ SWN ++ +AQHG +AL+++ MQ+ +P
Sbjct: 745 AIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRP 804
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ T + VLSAC H GL+EEG+++F SM R+ GI+ +H VV L A G+ +A E
Sbjct: 805 DSITLVSVLSACSHGGLIEEGYYHFTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEEL 864
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
++ P+ + V+W LLS CK D + AE+++ DP +A+++LS+V
Sbjct: 865 LRKMPVPASYVLWMTLLSACKVQGDEKRAKRVAERVMELDPRRPAAYVVLSSV 917
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 178/635 (28%), Positives = 309/635 (48%), Gaps = 49/635 (7%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S F + + N + MY K + DA +F + + +SW++L++ F++ G + A
Sbjct: 31 SEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSLDHPSQVSWNSLLAAFARDGQFQQAFQI 90
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F+ M L P+ T+V + C + GD GK +HG + +GLE N V LI MYGK
Sbjct: 91 FQRMKLQGLAPDRITFVTVLDGCTATGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGK 150
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + A+ VFD ++ +SW S++ +Y Q V L++F R SGV + + A+
Sbjct: 151 CGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATA 210
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
+ ACA + ++ G IHS V + E D V+ ++N+Y KC L+ A VF + P+
Sbjct: 211 ISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNT 270
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+W+A++ Q G EA+ F +M G P +VTF +L A + G L+
Sbjct: 271 VSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYE 330
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
I++ G+ + V N ++ YS C ++ + F M E D +SWN +I+GH + E
Sbjct: 331 CILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDE 390
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+ L + ML EG P+ +T+ +I++ ++ ++ K +V+ G + +V + SAL++
Sbjct: 391 AVHLFRRMLAEGITPDKFTFISIIDGTAR---MQEAKILSELMVESGVELDVFLVSALIN 447
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
M+++ G + +AR +FD + +++V W +++ Y QHG +AL +M+ + ND T
Sbjct: 448 MHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFT 507
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
+ L+AC + + EG +I H I RG +S
Sbjct: 508 LVTALNACASLTALSEG-----KLIHSHAIE---------------RG--------FAAS 539
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
P N ++ GC DLV + + ++S + ++ Y + + W E
Sbjct: 540 PAVGNALINMYAKCGCLEEADLVFHQ-CGKNLVSWNT--------IAAAYVQRDKWREAL 590
Query: 603 KVRKIMKEKSLKKD--------TGCSWTELQNKMH 629
++ + M+ + LK D GCS +K+H
Sbjct: 591 QLFQEMQLEGLKADKVSFVTVLNGCSSASEGSKIH 625
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 263/491 (53%), Gaps = 5/491 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G NV+ L+ MY K + DA+++FD++ ++V+SW+++I + Q A
Sbjct: 129 VLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEA 188
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + PN TY A+SACA GK IH ++ G E + VS ++NM
Sbjct: 189 LELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNM 248
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFS 179
YGKCG L A+ VF+ N++SW +++++ Q G V L F + + G + +
Sbjct: 249 YGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVT 308
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++L AC+ L G ++ + +C + V ++ +Y+ C ++D A+ FS +
Sbjct: 309 FITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMV 368
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D +W+ +I G+AQ G EA+ LF +M + G+ P + TF ++ A ++E +
Sbjct: 369 ERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQE---AKI 425
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
L L+++ G F+ + +++ +S+ + E+ FD+M + D+V W ++I+ ++
Sbjct: 426 LSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGS 485
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A+ + M EG N +T LN + + A+ GK H ++ GF ++ +G+A
Sbjct: 486 SDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASPAVGNA 545
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L++MYAKCG L +A VF H KNLVSWNT+ Y Q REAL+++ MQ +K +
Sbjct: 546 LINMYAKCGCLEEADLVF-HQCGKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKAD 604
Query: 480 DNTFIGVLSAC 490
+F+ VL+ C
Sbjct: 605 KVSFVTVLNGC 615
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 258/488 (52%), Gaps = 12/488 (2%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T++ + CA + G+ +H R+ S + V N I+MYGKCG + A VF +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSL 63
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+ +SW SLL+++ + G+ +IF + G+A + +VL C G+L G
Sbjct: 64 DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGK 123
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
+H V + LE + V LI +Y KC ++ A RVF + L D+ +W+++I Y Q
Sbjct: 124 LLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHD 183
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+ EA++LF +M SG++P+ +T++ + A A V+ G+ +HS +++ GF S V+
Sbjct: 184 RCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSC 243
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL----KDMLFE 373
+++ Y KC LE++ + F+ M + VSWNA++A A +G +E L + L
Sbjct: 244 AIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVA---ACTQHGCCVEALWYFQRMQLQG 300
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G P+ T+ ILN S + +G+ + CI++ G+D+++++G+ ++ MY+ CGR+++A
Sbjct: 301 GSTPDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNA 360
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
F + ++ +SWNT++ G+AQ G EA+ ++ M I P+ TFI ++ +
Sbjct: 361 AAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARM 420
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
+ + ++ + G+ + +++++++ + G R A + + V+W
Sbjct: 421 ----QEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMK-DRDIVMWTS 475
Query: 554 LLSGCKTH 561
++S H
Sbjct: 476 IISSYVQH 483
>gi|357516795|ref|XP_003628686.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355522708|gb|AET03162.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 699
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 206/668 (30%), Positives = 350/668 (52%), Gaps = 30/668 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I SG ++ T N+L+ Y K +++ A +LFD+MP+R+ +SW+A+ISG+ +
Sbjct: 26 IKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTADLDSTW 85
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
M + +T+ + A G+++H M + L N + L++MY
Sbjct: 86 QLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSALLDMY 145
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A VF E N +SW +L++ Y + G+ + GV I + + +
Sbjct: 146 AKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGIDDGTVS 205
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS---NI 238
+L + + MQ+H + K LE V +I Y++C L A RVF +
Sbjct: 206 PLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTV 265
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
DL W++++ Y K A D+F++M S G P + +++ V+ + + G
Sbjct: 266 TCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGE 325
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFY----SKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
LH L+IK G V+N ++ Y ++C +E++L+ F MD D +WN+++AG+
Sbjct: 326 SLHGLVIKRGAEVSVPVSNALIAMYLGFDNRC--MEDALRIFFSMDVKDCCTWNSVLAGY 383
Query: 355 LASCHYGEAIEL---LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
+ +A+ L ++ + E + YT+S ++ SD+ ++ G+Q H +K GFD
Sbjct: 384 VQVGRSEDALRLFVQVRSLFVE---IDDYTFSAVIRCCSDLATLQLGQQVHVLSLKVGFD 440
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+N +G DA+K F+ S+ N + WN+++ GYAQHG G ALE++ +M
Sbjct: 441 TNKYVG-------------KDAKKCFETTSNDNAIIWNSIIFGYAQHGQGNIALELFYLM 487
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
+E K+KP+ TF+ VL+AC H GLVEEG SM D GI RM+H A V L+ G
Sbjct: 488 REKKVKPDHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLRMEHYACAVDLYGRAGY 547
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
+++ P EP+ +V R LL C++ ++ L + A+ +L +PED S +++LS++
Sbjct: 548 LEEGKALVETMPFEPDAMVLRTLLGACRSCGNIELASHVAKMLLVLEPEDHSTYVLLSDL 607
Query: 592 YAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
Y MWDE A V ++M+E+ +KK G SW E++NK+H F+ + Q +++E++ QL
Sbjct: 608 YGRLKMWDEKASVTRLMRERGVKKVPGWSWIEVKNKVHAFNAEDHSHPQSKEIYELLLQL 667
Query: 652 S--VHLFD 657
+ LFD
Sbjct: 668 KEGIMLFD 675
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 234/502 (46%), Gaps = 40/502 (7%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
+ H +SG + + SN LI Y KC L A +FD +R+++SW +++S Y
Sbjct: 19 QATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNT 78
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
+ ++ R SG A + S L A L++G Q+HS++ K L + F
Sbjct: 79 ADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSG 138
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L+++YAKC ++D A VF + + +W+ LI GY+++G A L G+
Sbjct: 139 SALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVG 198
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
+ T S +L V+ QLH I+K G +F V N ++ YS+C L+++ +
Sbjct: 199 IDDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERV 258
Query: 336 F---DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
F + D+V+WN+++A +L A ++ +M G P+ Y+Y+ +++ S
Sbjct: 259 FVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIK 318
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA----KCGRLNDARKVFDHLSSKNLVSW 448
G+ H ++K G + +V + +AL+ MY +C + DA ++F + K+ +W
Sbjct: 319 EHKSRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRC--MEDALRIFFSMDVKDCCTW 376
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY------ 502
N++L GY Q G +AL ++ ++ ++ +D TF V+ C + ++ G
Sbjct: 377 NSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSLK 436
Query: 503 ----------------FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE---FIKSSP 543
F + D+ I S++ +A GQ A E ++
Sbjct: 437 VGFDTNKYVGKDAKKCFETTSNDNAIIWN-----SIIFGYAQHGQGNIALELFYLMREKK 491
Query: 544 IEPNKVVWRCLLSGCKTHKDLV 565
++P+ + + +L+ C +H LV
Sbjct: 492 VKPDHITFVAVLTAC-SHNGLV 512
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 220/455 (48%), Gaps = 37/455 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + NV + + LL MY K R++DA +F MPE N +SW+ LI+G+S++G ++A
Sbjct: 126 MIKMRLNENVFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMA 185
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARS----GKEIHGRMYRSGLELNSHVSNC 116
F LM C LE G VS + D ++H ++ + GLE + V N
Sbjct: 186 ---FWLMRCQELE-GVGIDDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNA 241
Query: 117 LINMYGKCGLLSSAQFVFDASLE---RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
+I Y +C L A+ VF ++ R+ ++W S+L++Y + +F+ + G
Sbjct: 242 IITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGF 301
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK--LDLA 231
++S V+ C++ + G +H LV K E V+ LI +Y + ++ A
Sbjct: 302 EPDDYSYTGVISGCSIKEHKSRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRCMEDA 361
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
R+F ++ + D W++++ GY Q+G++ +A+ LFV++ S + + TFS V+ +D+
Sbjct: 362 LRIFFSMDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDL 421
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
G+Q+H L +K+GF + +V +++ K F+ + + WN++I
Sbjct: 422 ATLQLGQQVHVLSLKVGFDTNKYVG-------------KDAKKCFETTSNDNAIIWNSII 468
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
G+ A+EL M + P+ T+ +L S +E G++ + +
Sbjct: 469 FGYAQHGQGNIALELFYLMREKKVKPDHITFVAVLTACSHNGLVEEGRK-----IIQSME 523
Query: 412 SNVVIG------SALVDMYAKCGRLNDARKVFDHL 440
S+ I + VD+Y + G L + + + + +
Sbjct: 524 SDFGIPLRMEHYACAVDLYGRAGYLEEGKALVETM 558
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 214/678 (31%), Positives = 343/678 (50%), Gaps = 99/678 (14%)
Query: 84 SACASRGDARSGKEIHGRMYRSGLE-LNSHVSNCLINMY--------------------- 121
SA SR D G+ IH R+ + GL L ++N L+N+Y
Sbjct: 21 SAIKSR-DPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTT 79
Query: 122 ----------GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
K G L SA+ VFD + +S+SW +++ Y G + FL S
Sbjct: 80 FSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSS 139
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE----- 226
G++ ++F+ +VL +CA L VG ++HS V K VA L+N+YAKC
Sbjct: 140 GISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMA 199
Query: 227 --------------------------KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
+ DLA +F + PD+ +W+++I GY G
Sbjct: 200 KVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDI 259
Query: 261 EAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK------------- 306
A++ F M SS L P + T VL A A+ + G+Q+H+ I++
Sbjct: 260 RALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNAL 319
Query: 307 -------------------MGFSSFTFVANT-VLDFYSKCELLEESLKTFDEMDEHDVVS 346
G S +A T +LD Y K ++ + FD + DVV+
Sbjct: 320 ISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVA 379
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
W A+I G+ + +A+ L + M+ EG PN YT + +L++ S + +++ GKQ H +
Sbjct: 380 WTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAI 439
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREAL 465
+ S+V +G+AL+ MY++ G + DARK+F+H+ S ++ ++W +M++ AQHGLG EA+
Sbjct: 440 RLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAI 499
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
E++ M +KP+ T++GVLSAC H+GLVE+G YFN M H I P H A ++ L
Sbjct: 500 ELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDL 559
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
G AY FI++ PIEP+ V W LLS C+ HK + L + AAEK+L DP ++ A+
Sbjct: 560 LGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAY 619
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLH 645
+ L+N + W++ AKVRK MK+K++KK+ G SW +++NK+H F Q ++
Sbjct: 620 LALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIY 679
Query: 646 EVMNQLSVHLFDGGYVPD 663
+++++ + G++PD
Sbjct: 680 CMISKIWKEIKKMGFIPD 697
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 137/557 (24%), Positives = 263/557 (47%), Gaps = 86/557 (15%)
Query: 12 TYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
++N +L + K ++ A+++FDE+P+ + +SW+ +I G++ +G+ + A++ F MV
Sbjct: 81 SWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSG 140
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ P +T+ +++CA+ GK++H + + G V+N L+NMY KCG A+
Sbjct: 141 ISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAK 200
Query: 132 FVFDASLERNS-------------------------------ISWVSLLSSYCQCGEHVH 160
VFD +++ +SW S+++ YC G +
Sbjct: 201 VVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIR 260
Query: 161 GLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI 219
L+ F + + S + +F+ SVL ACA +LK+G QIH+ + + ++ V LI
Sbjct: 261 ALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALI 320
Query: 220 NLYAKCEKLDLASR---------------------------------VFSNIQLPDLTAW 246
++YAK +++A R +F +++ D+ AW
Sbjct: 321 SMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAW 380
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+A+I GYAQ G +A+ LF M G P+ T + VL + + G+QLH++ I+
Sbjct: 381 TAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIR 440
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYG---E 362
+ S V N ++ YS+ ++++ K F+ + D ++W ++I L+ +G E
Sbjct: 441 LEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMI---LSLAQHGLGNE 497
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP--GFDSNVVIGSAL 420
AIEL + ML P+ TY +L+ + + +E GK ++ ++K + + +
Sbjct: 498 AIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGK-SYFNLMKNVHNIEPTSSHYACM 556
Query: 421 VDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH---GLGREALEIYSMMQENKI 476
+D+ + G L +A ++ ++V+W ++L H L + A E ++ N
Sbjct: 557 IDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPN-- 614
Query: 477 KPNDNTFIGV---LSAC 490
N ++ + LSAC
Sbjct: 615 --NSGAYLALANTLSAC 629
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 131/280 (46%), Gaps = 8/280 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
IT NVI + LL Y K I+ A+ +FD + R+V++W+A+I G++Q G+ AL
Sbjct: 338 ITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDAL 397
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
FRLM+ +PN YT +S +S GK++H R + V N LI MY
Sbjct: 398 VLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMY 457
Query: 122 GKCGLLSSAQFVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ G + A+ +F+ R++++W S++ S Q G +++F + + +
Sbjct: 458 SRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITY 517
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKC-ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
VL AC +G ++ G +L+ +E +I+L + L+ A N+
Sbjct: 518 VGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMP 577
Query: 240 L-PDLTAWSALIGG-----YAQLGKACEAIDLFVKMFSSG 273
+ PD+ AW +L+ Y L K L + +SG
Sbjct: 578 IEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSG 617
>gi|255541480|ref|XP_002511804.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548984|gb|EEF50473.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 607
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 299/518 (57%), Gaps = 1/518 (0%)
Query: 12 TYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
++N ++ Y R+ DA++LF E P ++ I+WS+LISGF + A + M
Sbjct: 55 SWNTMIAAYANSGRLTDAKQLFCEAPLKSSITWSSLISGFCKYEFDIEAFELYLQMQFEG 114
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
PN+YT + C+ G + G+ IHG ++ L+ N V L+++Y KC +S A+
Sbjct: 115 QRPNHYTLGSILRLCSRTGFLQKGERIHGYAIKTRLDANVFVVTSLVDLYAKCECISEAE 174
Query: 132 FVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
++F+ + +N +W ++L+ Y G+ +K F R GV ++F+ S+L AC +
Sbjct: 175 YIFEMVADSKNHATWTAMLTGYSHNGDGFRAIKCFRDMRAEGVESNQFTFPSILTACGAV 234
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
+ G+Q+H + + + FV L+++YAKC L+ A+RV N+++ D+ +W+++I
Sbjct: 235 SDHVFGVQVHGCIVRSGFGANIFVQSALVDMYAKCRDLNSANRVLENMEVNDVVSWNSMI 294
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
G + G EA+ LF +M + + + T+ VL +FA +K+ + H LIIK GF
Sbjct: 295 VGCVREGFEAEALSLFNEMHARDIKIDDYTYPSVLNSFASMKDIQSAKSAHCLIIKTGFG 354
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
++T V N ++D Y+K L+ + F++M + DVVSW +L+ G+ + Y +AI+L DM
Sbjct: 355 AYTLVNNALVDMYAKQGNLDYAFTVFNQMPDKDVVSWTSLVTGYSYNGSYEDAIKLFCDM 414
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
G CP+ +++L+ +++ E+G+Q H I+K G S++ I ++LV MYAKCG +
Sbjct: 415 RIAGVCPDQIVLASVLSACAELTVTEFGQQVHATILKSGLCSSLSIDNSLVTMYAKCGGI 474
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
DA VFD + ++++SW ++VGYAQ+G G+++L Y M KP+ TFIG+L AC
Sbjct: 475 EDANYVFDSMQIRDVISWTALIVGYAQNGRGKDSLHFYDQMIATGTKPDFITFIGLLFAC 534
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
H GLVE+G YF SM +++G S + H+F C
Sbjct: 535 SHTGLVEDGRRYFESMDKEYGASHKWFKQLPSSHIFQC 572
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 192/394 (48%), Gaps = 7/394 (1%)
Query: 165 FLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK 224
++++R++G + S L + G + I F E D+F +I YA
Sbjct: 10 YIIARQTGFSYSAIKSNQQLNDLSKSGRIDEARHI----FDKLPERDEFSWNTMIAAYAN 65
Query: 225 CEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYV 284
+L A ++F L WS+LI G+ + EA +L+++M G P+ T +
Sbjct: 66 SGRLTDAKQLFCEAPLKSSITWSSLISGFCKYEFDIEAFELYLQMQFEGQRPNHYTLGSI 125
Query: 285 LGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHD 343
L + G ++H IK + FV +++D Y+KCE + E+ F+ + D +
Sbjct: 126 LRLCSRTGFLQKGERIHGYAIKTRLDANVFVVTSLVDLYAKCECISEAEYIFEMVADSKN 185
Query: 344 VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHC 403
+W A++ G+ + AI+ +DM EG N +T+ +IL + +G Q H
Sbjct: 186 HATWTAMLTGYSHNGDGFRAIKCFRDMRAEGVESNQFTFPSILTACGAVSDHVFGVQVHG 245
Query: 404 CIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGRE 463
CIV+ GF +N+ + SALVDMYAKC LN A +V +++ ++VSWN+M+VG + G E
Sbjct: 246 CIVRSGFGANIFVQSALVDMYAKCRDLNSANRVLENMEVNDVVSWNSMIVGCVREGFEAE 305
Query: 464 ALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV 523
AL +++ M IK +D T+ VL++ + ++ + +I G ++V
Sbjct: 306 ALSLFNEMHARDIKIDDYTYPSVLNSFASMKDIQSA-KSAHCLIIKTGFGAYTLVNNALV 364
Query: 524 HLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++A +G A+ P + + V W L++G
Sbjct: 365 DMYAKQGNLDYAFTVFNQMP-DKDVVSWTSLVTG 397
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 164/299 (54%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF N+ + L+ MY K +N A ++ + M +V+SW+++I G + G A
Sbjct: 247 IVRSGFGANIFVQSALVDMYAKCRDLNSANRVLENMEVNDVVSWNSMIVGCVREGFEAEA 306
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M ++ + YTY +++ AS D +S K H + ++G + V+N L++M
Sbjct: 307 LSLFNEMHARDIKIDDYTYPSVLNSFASMKDIQSAKSAHCLIIKTGFGAYTLVNNALVDM 366
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A VF+ +++ +SW SL++ Y G + +K+F R +GV +
Sbjct: 367 YAKQGNLDYAFTVFNQMPDKDVVSWTSLVTGYSYNGSYEDAIKLFCDMRIAGVCPDQIVL 426
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASVL ACA L + G Q+H+ + K L + L+ +YAKC ++ A+ VF ++Q+
Sbjct: 427 ASVLSACAELTVTEFGQQVHATILKSGLCSSLSIDNSLVTMYAKCGGIEDANYVFDSMQI 486
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +W+ALI GYAQ G+ +++ + +M ++G P +TF +L A + GR+
Sbjct: 487 RDVISWTALIVGYAQNGRGKDSLHFYDQMIATGTKPDFITFIGLLFACSHTGLVEDGRR 545
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 301 HSLII--KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS- 357
HS II + GFS +N L+ SK ++E+ FD++ E D SWN +IA + S
Sbjct: 8 HSYIIARQTGFSYSAIKSNQQLNDLSKSGRIDEARHIFDKLPERDEFSWNTMIAAYANSG 67
Query: 358 ---------------------------CHYG---EAIELLKDMLFEGHCPNLYTYSNILN 387
C Y EA EL M FEG PN YT +IL
Sbjct: 68 RLTDAKQLFCEAPLKSSITWSSLISGFCKYEFDIEAFELYLQMQFEGQRPNHYTLGSILR 127
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLV 446
+ S ++ G++ H +K D+NV + ++LVD+YAKC +++A +F+ ++ SKN
Sbjct: 128 LCSRTGFLQKGERIHGYAIKTRLDANVFVVTSLVDLYAKCECISEAEYIFEMVADSKNHA 187
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
+W ML GY+ +G G A++ + M+ ++ N TF +L+AC + G +
Sbjct: 188 TWTAMLTGYSHNGDGFRAIKCFRDMRAEGVESNQFTFPSILTACGAVSDHVFGVQVHGCI 247
Query: 507 IRDHGISPRMDHIASVVHLFA-CR--GQTRRAYEFIKSSPIEPNKVV-WRCLLSGC 558
+R G + +++V ++A CR R E +E N VV W ++ GC
Sbjct: 248 VRS-GFGANIFVQSALVDMYAKCRDLNSANRVLE-----NMEVNDVVSWNSMIVGC 297
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 307/554 (55%), Gaps = 10/554 (1%)
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK-SGVAISEF 178
MY KCG L A VF +RN +SW +L+ + + G+ L++ R S A +E+
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ ++ L AC V+G+ G+ IH L + + VA L+ +Y+K ++ A RVF
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120
Query: 239 QL-PDLTAWSALIGGYAQLGKACEAIDLFVKM--FSSGLMPSEVTFSYVLGAFADVKETI 295
L + W+A++ GYA G +A+ +F +M P E TF+ +L A + + T
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180
Query: 296 GGRQLHSLIIKMGFS--SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G Q+H+ + GFS S +A ++D Y KC L +++ F+ ++ +V+ W A++ G
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
H EA+EL + G P+ + S+++ + +D +E G+Q HC +K ++
Sbjct: 241 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD 300
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V G+++VDMY KCG ++A ++F + + N+VSW TM+ G +HGLGREA+ ++ M+
Sbjct: 301 VSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRA 360
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
++P++ T++ +LSAC H GLV+E YF+ + RD + P+ +H A +V L G+ R
Sbjct: 361 GGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELR 420
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A + I++ P+EP VW+ LLS C+ HKD+ +GR A + +L+ D ++ ++ LSNV A
Sbjct: 421 EARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLA 480
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF---STSRFAQFQGIDLHEVMNQ 650
EA W E KVR M+ + LKK GCSW E+ ++H+F Q D+ V+
Sbjct: 481 EAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRD 540
Query: 651 LSVHLFDG-GYVPD 663
+ + + GY D
Sbjct: 541 METRMREQLGYNAD 554
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 141/468 (30%), Positives = 233/468 (49%), Gaps = 19/468 (4%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF-RLMVCCVLEPNYY 77
MYVK ++ A ++F M +RNV+SW+AL+ GF + G L + PN Y
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD-A 136
T ++ AC GD +G IHG R+G + + V++ L+ +Y K G + A+ VFD A
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120
Query: 137 SLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGV-AISEFSCASVLGACAVLGNLK 194
L +W +++S Y G L +F + R G EF+ AS+L AC+ LG +
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180
Query: 195 VGMQIHSLVFKCALEF--DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
G Q+H+ + + +A L+++Y KC +L +A +VF ++ ++ W+A++ G
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
+AQ G+ EA++LF + + SG P S V+G AD GRQ+H IK +
Sbjct: 241 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD 300
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
N+++D Y KC L +E+ + F EM +VVSW ++ G EA+ L ++M
Sbjct: 301 VSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRA 360
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGSALVDMYAKC 427
G P+ TY +L+ S ++ ++ CI V+P + + +VD+ +
Sbjct: 361 GGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHY----ACMVDLLGRA 416
Query: 428 GRLNDARKVFDHLSSKNLVS-WNTMLVGYAQH---GLGREALEIYSMM 471
G L +AR + + + V W T+L H +GREA ++ M
Sbjct: 417 GELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAM 464
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 149/291 (51%), Gaps = 5/291 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQIGMPEVA 60
+ +G+ + + + L+L+Y K RI DA+++FD + +W+A++SG++ G A
Sbjct: 86 VRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDA 145
Query: 61 LNYFRLMVC--CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL--NSHVSNC 116
L FR M +P+ +T+ + AC+ G R G ++H M SG N+ ++
Sbjct: 146 LLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGA 205
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
L++MY KC L A VF+ +N I W +++ + Q G+ L++F +SG
Sbjct: 206 LVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPD 265
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+SV+G A ++ G Q+H K D ++++Y KC D A R+F
Sbjct: 266 SHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFR 325
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
++ P++ +W+ ++ G + G EA+ LF +M + G+ P EVT+ +L A
Sbjct: 326 EMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSA 376
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 141/344 (40%), Gaps = 32/344 (9%)
Query: 1 MITSGFHP--NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPE 58
M SGF N I L+ MYVK R+ A ++F+ + +NVI W+A++ G +Q G
Sbjct: 189 MTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVT 248
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
AL FR P+ + V A G+++H + + N ++
Sbjct: 249 EALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIV 308
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+MY KCGL A+ +F N +SW ++++ + G + +F R GV E
Sbjct: 309 DMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEV 368
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEF-----DKFVAMG------LINLYAKCEK 227
+ ++L AC+ G LV +C F D+ V +++L + +
Sbjct: 369 TYLALLSACSHAG----------LVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGE 418
Query: 228 LDLASRVFSNIQL-PDLTAWSALIGG---YAQLGKACEAIDLFVKMFSSGLMP-SEVTFS 282
L A + + + P + W L+ + + EA D+ + M G P + VT S
Sbjct: 419 LREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAM--DGDNPVNYVTLS 476
Query: 283 YVLGAFADVKE--TIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
VL + +E + + K G S+ V V FY
Sbjct: 477 NVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYG 520
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 202/665 (30%), Positives = 354/665 (53%), Gaps = 42/665 (6%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
P VI N + +++ R+ DA++LF MP R+ +++A+++G+S G +A + FR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 66 LMVCCVLEPNYYTY---VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+ P+ Y+Y + A++ +S DAR ++ +S N +I+ +
Sbjct: 94 ----AIPRPDNYSYNTLLHALAVSSSLADARG-------LFDEMPVRDSVTYNVMISSHA 142
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
GL+S A+ FD + E++++SW +L++Y + G V + SR AI S +
Sbjct: 143 NHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNG-RVEEARGLFNSRTEWDAI---SWNA 198
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINL------YAKCEKLDLASRVFS 236
++ G + ++ FD+ +++ YA+ + A R+F
Sbjct: 199 LMSGYVQWGKMSEAREL----------FDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD 248
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ D+ W+A++ GYAQ G EA +F M + V+++ ++ A+ +
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDE 304
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
++L +++ +S+ NT+L Y++ +LEE+ FD M + D VSW A++A +
Sbjct: 305 AKELFNMMPCRNVASW----NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQ 360
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
E ++L +M G N ++ +L+ +DI A+E G Q H +++ G+ +
Sbjct: 361 GGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFV 420
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
G+AL+ MY KCG + DAR F+ + +++VSWNTM+ GYA+HG G+EALEI+ MM+
Sbjct: 421 GNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTST 480
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+D T +GVL+AC H GLVE+G YF SM D G++ + +H ++ L G+ A+
Sbjct: 481 KPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAH 540
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+ +K P EP+ +W LL + H++ LGR AAEKI +PE+ +++LSN+YA +
Sbjct: 541 DLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSG 600
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W + K+R +M+E+ +KK G SW E+QNK+H FS + ++ + L + +
Sbjct: 601 KWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMK 660
Query: 657 DGGYV 661
GYV
Sbjct: 661 KAGYV 665
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G+ N LL MY K + DA+ F+EM ER+V+SW+ +I+G+++ G + A
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F +M +P+ T VG ++AC+ G G M+ G+ C+I+
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 120 MYGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
+ G+ G L+ A + D E +S W +LL +
Sbjct: 529 LLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGA 561
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 210/698 (30%), Positives = 353/698 (50%), Gaps = 60/698 (8%)
Query: 32 LFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGD 91
+ + + + W+ LI + G + A+N M+ P+++T + AC
Sbjct: 118 VLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPS 177
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER---NSISWVSL 148
R G HG + +G E N + N L+ MY +CG L A +FD +R + ISW S+
Sbjct: 178 YRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSI 237
Query: 149 LSSYCQCGEHVHGLKIF-----LLSRKSGVAISEF-SCASVLGACAVLGNLKVGMQIHSL 202
+S++ + L +F ++ K S+ S ++L AC L + ++H
Sbjct: 238 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGN 297
Query: 203 VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG----- 257
+ D FV LI+ YAKC ++ A +VF+ ++ D+ +W+A++ GY+Q G
Sbjct: 298 AIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAA 357
Query: 258 ----------------------------KAC--EAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ C EA++LF +M SG +P+ VT VL A
Sbjct: 358 FELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSA 417
Query: 288 FADVKETIGGRQLHSLIIKM----------GFSSFTFVANTVLDFYSKCELLEESLKTFD 337
A + G ++H+ +K G V N ++D YSKC + + FD
Sbjct: 418 CASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFD 477
Query: 338 E--MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE--GHCPNLYTYSNILNISSDIP 393
+ ++E +VV+W +I GH +A++L +M+ E G PN YT S IL + +
Sbjct: 478 DIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLA 537
Query: 394 AIEWGKQTHCCIVKP-GFDSNV-VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
AI GKQ H +++ ++S+ + + L+DMY+KCG ++ AR VFD +S K+ +SW +M
Sbjct: 538 AIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSM 597
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
+ GY HG G EAL+I+ M++ P+D TF+ VL AC H G+V++G YF+SM D+G
Sbjct: 598 MTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYG 657
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA 571
++PR +H A + L A G+ +A+ +K P+EP VVW LLS C+ H ++ L +A
Sbjct: 658 LTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHAL 717
Query: 572 EKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
K++ + E+ ++ ++SN+YA A W + A++R +MK+ +KK GCSW + Q F
Sbjct: 718 NKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASF 777
Query: 632 STSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ ++ ++ L + GYVP+ ++ H
Sbjct: 778 FVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALH 815
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 153/540 (28%), Positives = 244/540 (45%), Gaps = 92/540 (17%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER---NVISWSALISGFSQIGMPEVA 60
+GF NV N L+ MY + + +A +FDE+ +R +VISW++++S + A
Sbjct: 191 NGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTA 250
Query: 61 LNYFRLMVCCVLEP------NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
L+ F M V E + + V + AC S KE+HG R+G + V
Sbjct: 251 LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVG 310
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N LI+ Y KCGL+ +A VF+ ++ +SW ++++ Y Q G ++F RK +
Sbjct: 311 NALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIP 370
Query: 175 I------------SEFSCA-----------------------SVLGACAVLGNLKVGMQI 199
+ S+ C+ SVL ACA LG G +I
Sbjct: 371 LDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEI 430
Query: 200 HSLVFK-CALEFDK---------FVAMGLINLYAKCEKLDLASRVFSNIQLPD--LTAWS 247
H+ K C L D V LI++Y+KC A +F +I L + + W+
Sbjct: 431 HAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWT 490
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSS--GLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
+IGG+AQ G + +A+ LFV+M S G+ P+ T S +L A A + G+Q+H+ ++
Sbjct: 491 VMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVL 550
Query: 306 KMGF--SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+ SS FVAN ++D YSKC ++ + FD M + +SW +++ G+ EA
Sbjct: 551 RHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEA 610
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG---FDS-NVVIG-- 417
+++ M G P+ T+ +L S HC +V G FDS + G
Sbjct: 611 LDIFDKMRKAGFVPDDITFLVVLYACS-----------HCGMVDQGLSYFDSMSADYGLT 659
Query: 418 ------SALVDMYAKCGRLNDA-RKVFDHLSSKNLVSWNTML--------VGYAQHGLGR 462
+ +D+ A+ GRL+ A R V D V W +L V A+H L +
Sbjct: 660 PRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNK 719
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 225/504 (44%), Gaps = 60/504 (11%)
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
++ Y CG A V + ++ W L+ + + G + + ++G
Sbjct: 102 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 161
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
F+ VL AC L + + G H L+ E + F+ L+ +Y++C L+ AS +F
Sbjct: 162 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 221
Query: 237 NIQ---LPDLTAWSALIGGYAQLGKACEAIDLFVKMF------SSGLMPSEVTFSYVLGA 287
I + D+ +W++++ + + A A+DLF KM + ++ +L A
Sbjct: 222 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 281
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
+K +++H I+ G FV N ++D Y+KC L+E ++K F+ M+ DVVSW
Sbjct: 282 CGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSW 341
Query: 348 NALIAGHLASCHYGEAIELLKD-----------------------------------MLF 372
NA++AG+ S ++ A EL K+ M+F
Sbjct: 342 NAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIF 401
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK----------PGFDSNVVIGSALVD 422
G PN T ++L+ + + A G + H +K G D ++++ +AL+D
Sbjct: 402 SGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 461
Query: 423 MYAKCGRLNDARKVFDH--LSSKNLVSWNTMLVGYAQHGLGREALEIYSMM--QENKIKP 478
MY+KC AR +FD L +N+V+W M+ G+AQ+G +AL+++ M + + P
Sbjct: 462 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 521
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS-VVHLFACRGQTRRAYE 537
N T +L AC H+ + G ++R H +A+ ++ +++ G A
Sbjct: 522 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARH 581
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTH 561
S + + + W +++G H
Sbjct: 582 VFDSMS-QKSAISWTSMMTGYGMH 604
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 206/406 (50%), Gaps = 31/406 (7%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERN----VISWSALISGFSQIGMPEVALNYF 64
+V+++N ++ Y + A +LF M + N V++W+A+I+G+SQ G ALN F
Sbjct: 337 DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLF 396
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS----------GLELNSHVS 114
R M+ PN T + +SACAS G G EIH ++ G + + V
Sbjct: 397 RQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVY 456
Query: 115 NCLINMYGKCGLLSSAQFVFD--ASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRK 170
N LI+MY KC +A+ +FD ERN ++W ++ + Q G+ LK+F ++S
Sbjct: 457 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 516
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK---FVAMGLINLYAKCEK 227
GVA + ++ + +L ACA L +++G QIH+ V + ++ FVA LI++Y+KC
Sbjct: 517 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR-HHRYESSAYFVANCLIDMYSKCGD 575
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+D A VF ++ +W++++ GY G+ EA+D+F KM +G +P ++TF VL A
Sbjct: 576 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 635
Query: 288 FADVKETIGGRQ-LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVV 345
+ G S+ G + +D ++ L+++ +T +M E V
Sbjct: 636 CSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAV 695
Query: 346 SWNALIAGHLASCHYGEAIELLK---DMLFEGHCPNLYTYSNILNI 388
W AL L++C +EL + + L E + N +Y+ I NI
Sbjct: 696 VWVAL----LSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNI 737
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 163/336 (48%), Gaps = 10/336 (2%)
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
+ + G++ Y C D A V + W+ LI + + G+ AI++ +M
Sbjct: 96 RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 155
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
+G P T +VL A ++ G H LI GF S F+ N ++ YS+C LEE
Sbjct: 156 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 215
Query: 332 SLKTFDEMDEH---DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+ FDE+ + DV+SWN++++ H+ S + A++L M H S+I++I
Sbjct: 216 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 275
Query: 389 SSDIP------AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+ +P A+ K+ H ++ G +V +G+AL+D YAKCG + +A KVF+ +
Sbjct: 276 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 335
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
K++VSWN M+ GY+Q G A E++ M++ I + T+ V++ G E +
Sbjct: 336 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 395
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
F MI G P I SV+ A G + E
Sbjct: 396 FRQMIFS-GSLPNCVTIISVLSACASLGAFSQGTEI 430
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 139/276 (50%), Gaps = 11/276 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPEVALN 62
G +++ YN L+ MY K A+ +FD++P ERNV++W+ +I G +Q G AL
Sbjct: 448 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 507
Query: 63 YFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS--HVSNCLI 118
F M+ + PN YT + ACA R GK+IH + R +S V+NCLI
Sbjct: 508 LFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLI 567
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+MY KCG + +A+ VFD+ ++++ISW S+++ Y G L IF RK+G +
Sbjct: 568 DMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 627
Query: 179 SCASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ VL AC+ G + G+ S+ L I+L A+ +LD A R +
Sbjct: 628 TFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKD 687
Query: 238 IQL-PDLTAWSALIGG---YAQLGKACEAIDLFVKM 269
+ + P W AL+ ++ + A A++ V+M
Sbjct: 688 MPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEM 723
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 210/698 (30%), Positives = 353/698 (50%), Gaps = 60/698 (8%)
Query: 32 LFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGD 91
+ + + + W+ LI + G + A+N M+ P+++T + AC
Sbjct: 111 VLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPS 170
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER---NSISWVSL 148
R G HG + +G E N + N L+ MY +CG L A +FD +R + ISW S+
Sbjct: 171 YRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSI 230
Query: 149 LSSYCQCGEHVHGLKIF-----LLSRKSGVAISEF-SCASVLGACAVLGNLKVGMQIHSL 202
+S++ + L +F ++ K S+ S ++L AC L + ++H
Sbjct: 231 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGN 290
Query: 203 VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG----- 257
+ D FV LI+ YAKC ++ A +VF+ ++ D+ +W+A++ GY+Q G
Sbjct: 291 AIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAA 350
Query: 258 ----------------------------KAC--EAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ C EA++LF +M SG +P+ VT VL A
Sbjct: 351 FELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSA 410
Query: 288 FADVKETIGGRQLHSLIIKM----------GFSSFTFVANTVLDFYSKCELLEESLKTFD 337
A + G ++H+ +K G V N ++D YSKC + + FD
Sbjct: 411 CASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFD 470
Query: 338 E--MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE--GHCPNLYTYSNILNISSDIP 393
+ ++E +VV+W +I GH +A++L +M+ E G PN YT S IL + +
Sbjct: 471 DIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLA 530
Query: 394 AIEWGKQTHCCIVKP-GFDSNV-VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
AI GKQ H +++ ++S+ + + L+DMY+KCG ++ AR VFD +S K+ +SW +M
Sbjct: 531 AIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSM 590
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
+ GY HG G EAL+I+ M++ P+D TF+ VL AC H G+V++G YF+SM D+G
Sbjct: 591 MTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYG 650
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA 571
++PR +H A + L A G+ +A+ +K P+EP VVW LLS C+ H ++ L +A
Sbjct: 651 LTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHAL 710
Query: 572 EKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
K++ + E+ ++ ++SN+YA A W + A++R +MK+ +KK GCSW + Q F
Sbjct: 711 NKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASF 770
Query: 632 STSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ ++ ++ L + GYVP+ ++ H
Sbjct: 771 FVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALH 808
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 153/540 (28%), Positives = 244/540 (45%), Gaps = 92/540 (17%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER---NVISWSALISGFSQIGMPEVA 60
+GF NV N L+ MY + + +A +FDE+ +R +VISW++++S + A
Sbjct: 184 NGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTA 243
Query: 61 LNYFRLMVCCVLEP------NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
L+ F M V E + + V + AC S KE+HG R+G + V
Sbjct: 244 LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVG 303
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N LI+ Y KCGL+ +A VF+ ++ +SW ++++ Y Q G ++F RK +
Sbjct: 304 NALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIP 363
Query: 175 I------------SEFSCA-----------------------SVLGACAVLGNLKVGMQI 199
+ S+ C+ SVL ACA LG G +I
Sbjct: 364 LDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEI 423
Query: 200 HSLVFK-CALEFDK---------FVAMGLINLYAKCEKLDLASRVFSNIQLPD--LTAWS 247
H+ K C L D V LI++Y+KC A +F +I L + + W+
Sbjct: 424 HAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWT 483
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSS--GLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
+IGG+AQ G + +A+ LFV+M S G+ P+ T S +L A A + G+Q+H+ ++
Sbjct: 484 VMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVL 543
Query: 306 KMGF--SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+ SS FVAN ++D YSKC ++ + FD M + +SW +++ G+ EA
Sbjct: 544 RHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEA 603
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG---FDS-NVVIG-- 417
+++ M G P+ T+ +L S HC +V G FDS + G
Sbjct: 604 LDIFDKMRKAGFVPDDITFLVVLYACS-----------HCGMVDQGLSYFDSMSADYGLT 652
Query: 418 ------SALVDMYAKCGRLNDA-RKVFDHLSSKNLVSWNTML--------VGYAQHGLGR 462
+ +D+ A+ GRL+ A R V D V W +L V A+H L +
Sbjct: 653 PRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNK 712
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 225/504 (44%), Gaps = 60/504 (11%)
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
++ Y CG A V + ++ W L+ + + G + + ++G
Sbjct: 95 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 154
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
F+ VL AC L + + G H L+ E + F+ L+ +Y++C L+ AS +F
Sbjct: 155 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 214
Query: 237 NIQ---LPDLTAWSALIGGYAQLGKACEAIDLFVKMF------SSGLMPSEVTFSYVLGA 287
I + D+ +W++++ + + A A+DLF KM + ++ +L A
Sbjct: 215 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 274
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
+K +++H I+ G FV N ++D Y+KC L+E ++K F+ M+ DVVSW
Sbjct: 275 CGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSW 334
Query: 348 NALIAGHLASCHYGEAIELLKD-----------------------------------MLF 372
NA++AG+ S ++ A EL K+ M+F
Sbjct: 335 NAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIF 394
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP----------GFDSNVVIGSALVD 422
G PN T ++L+ + + A G + H +K G D ++++ +AL+D
Sbjct: 395 SGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 454
Query: 423 MYAKCGRLNDARKVFDH--LSSKNLVSWNTMLVGYAQHGLGREALEIYSMM--QENKIKP 478
MY+KC AR +FD L +N+V+W M+ G+AQ+G +AL+++ M + + P
Sbjct: 455 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 514
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS-VVHLFACRGQTRRAYE 537
N T +L AC H+ + G ++R H +A+ ++ +++ G A
Sbjct: 515 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARH 574
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTH 561
S + + + W +++G H
Sbjct: 575 VFDSMS-QKSAISWTSMMTGYGMH 597
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 206/406 (50%), Gaps = 31/406 (7%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERN----VISWSALISGFSQIGMPEVALNYF 64
+V+++N ++ Y + A +LF M + N V++W+A+I+G+SQ G ALN F
Sbjct: 330 DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLF 389
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS----------GLELNSHVS 114
R M+ PN T + +SACAS G G EIH ++ G + + V
Sbjct: 390 RQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVY 449
Query: 115 NCLINMYGKCGLLSSAQFVFD--ASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRK 170
N LI+MY KC +A+ +FD ERN ++W ++ + Q G+ LK+F ++S
Sbjct: 450 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 509
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK---FVAMGLINLYAKCEK 227
GVA + ++ + +L ACA L +++G QIH+ V + ++ FVA LI++Y+KC
Sbjct: 510 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR-HHRYESSAYFVANCLIDMYSKCGD 568
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+D A VF ++ +W++++ GY G+ EA+D+F KM +G +P ++TF VL A
Sbjct: 569 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 628
Query: 288 FADVKETIGGRQ-LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVV 345
+ G S+ G + +D ++ L+++ +T +M E V
Sbjct: 629 CSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAV 688
Query: 346 SWNALIAGHLASCHYGEAIELLK---DMLFEGHCPNLYTYSNILNI 388
W AL L++C +EL + + L E + N +Y+ I NI
Sbjct: 689 VWVAL----LSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNI 730
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 163/336 (48%), Gaps = 10/336 (2%)
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
+ + G++ Y C D A V + W+ LI + + G+ AI++ +M
Sbjct: 89 RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 148
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
+G P T +VL A ++ G H LI GF S F+ N ++ YS+C LEE
Sbjct: 149 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 208
Query: 332 SLKTFDEMDEH---DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+ FDE+ + DV+SWN++++ H+ S + A++L M H S+I++I
Sbjct: 209 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 268
Query: 389 SSDIP------AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+ +P A+ K+ H ++ G +V +G+AL+D YAKCG + +A KVF+ +
Sbjct: 269 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 328
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
K++VSWN M+ GY+Q G A E++ M++ I + T+ V++ G E +
Sbjct: 329 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 388
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
F MI G P I SV+ A G + E
Sbjct: 389 FRQMIFS-GSLPNCVTIISVLSACASLGAFSQGTEI 423
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 139/276 (50%), Gaps = 11/276 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPEVALN 62
G +++ YN L+ MY K A+ +FD++P ERNV++W+ +I G +Q G AL
Sbjct: 441 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 500
Query: 63 YFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS--HVSNCLI 118
F M+ + PN YT + ACA R GK+IH + R +S V+NCLI
Sbjct: 501 LFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLI 560
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+MY KCG + +A+ VFD+ ++++ISW S+++ Y G L IF RK+G +
Sbjct: 561 DMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 620
Query: 179 SCASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ VL AC+ G + G+ S+ L I+L A+ +LD A R +
Sbjct: 621 TFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKD 680
Query: 238 IQL-PDLTAWSALIGG---YAQLGKACEAIDLFVKM 269
+ + P W AL+ ++ + A A++ V+M
Sbjct: 681 MPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEM 716
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 209/683 (30%), Positives = 347/683 (50%), Gaps = 53/683 (7%)
Query: 40 NVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIH 99
V W+ALI ++G+ + L ++ M P++YT+ + AC R G +H
Sbjct: 91 TVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVH 150
Query: 100 GRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER---NSISWVSLLSSYCQCG 156
+ +GL N + N ++ MYG+CG L A +FD LER + +SW S+L++Y Q G
Sbjct: 151 AIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGG 210
Query: 157 EHVHGLKI-FLLSRKSGVAI--SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
+ L+I F + + + + ++L ACA + L+ G Q+H + L D F
Sbjct: 211 QSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVF 270
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW--------------------------- 246
V L+++YAKC K++ A++VF I+ D+ +W
Sbjct: 271 VGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEED 330
Query: 247 --------SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
SA+I GYAQ G EA+D+F +M GL P+ VT + +L A V + G+
Sbjct: 331 IKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGK 390
Query: 299 QLHSLIIKMGFS-------SFTFVANTVLDFYSKCELLEESLKTFDEMDEHD--VVSWNA 349
Q H+ +IK + V N ++D Y+KC+ + FD ++ D VV+W
Sbjct: 391 QTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTV 450
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHC--PNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
+I G+ +A++L + + PN +T S L + + + G+Q H ++
Sbjct: 451 MIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALR 510
Query: 408 PGFDSNVV-IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
+S V+ +G+ L+DMY+K G ++ AR VFD++ +N+VSW +++ GY HG G EAL
Sbjct: 511 NENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALH 570
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
++ MQ+ + TF+ VL AC H G+V++G YF+ M++ GI+P +H A +V L
Sbjct: 571 LFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLL 630
Query: 527 ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI 586
G+ A E IK+ +EP VVW LLS + H ++ LG YAA K+ E+ ++
Sbjct: 631 GRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYT 690
Query: 587 MLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHE 646
+LSN+YA A W + A++R +MK ++K GCSW + + F + + ++
Sbjct: 691 LLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYN 750
Query: 647 VMNQLSVHLFDGGYVPDPIYSSH 669
++ L + D GYVP ++ H
Sbjct: 751 LLLDLIKRIKDMGYVPQTSFALH 773
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 146/505 (28%), Positives = 243/505 (48%), Gaps = 55/505 (10%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER---NVISWSALISGFSQIGMPEV 59
+G NV N ++ MY + ++DA ++FDE+ ER +++SW+++++ + Q G
Sbjct: 155 ANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRT 214
Query: 60 ALNY-FRL--MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
AL FR+ L P+ T V + ACAS + GK++HG R+GL + V N
Sbjct: 215 ALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNA 274
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS----- 171
L++MY KC ++ A VF+ +++ +SW ++++ Y Q G L +F + ++
Sbjct: 275 LVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLD 334
Query: 172 ------------------------------GVAISEFSCASVLGACAVLGNLKVGMQIHS 201
G+ + + AS+L CA +G L G Q H+
Sbjct: 335 VITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHA 394
Query: 202 LVFKCAL-------EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD--LTAWSALIGG 252
V K L E D V GLI++YAKC+ +A +F +I+ D + W+ +IGG
Sbjct: 395 YVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGG 454
Query: 253 YAQLGKACEAIDLFVKMF--SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK-MGF 309
YAQ G+A +A+ LF ++F + L P+ T S L A A + E GRQLH+ ++
Sbjct: 455 YAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENE 514
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
S +V N ++D YSK ++ + FD M +VVSW +L+ G+ EA+ L
Sbjct: 515 SEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQ 574
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCG 428
M G + T+ +L S ++ G +VK G + +VD+ + G
Sbjct: 575 MQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAG 634
Query: 429 RLNDARKVFDHLS-SKNLVSWNTML 452
RLN+A ++ ++S V W +L
Sbjct: 635 RLNEAMELIKNMSMEPTAVVWVALL 659
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 195/401 (48%), Gaps = 49/401 (12%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG------ 55
+ +G +V N L+ MY K S++N+A K+F+ + +++V+SW+A+++G+SQIG
Sbjct: 261 VRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSAL 320
Query: 56 -----MPE------------------------VALNYFRLMVCCVLEPNYYTYVGAVSAC 86
M E AL+ FR M LEPN T +S C
Sbjct: 321 SLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGC 380
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSH-------VSNCLINMYGKCGLLSSAQFVFDA--S 137
AS G GK+ H + ++ L LN + V N LI+MY KC A+ +FD+
Sbjct: 381 ASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEG 440
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKV 195
++N ++W ++ Y Q GE LK+F + +K+ + + F+ + L ACA LG L++
Sbjct: 441 KDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRL 500
Query: 196 GMQIHSLVFKCALEFDK-FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G Q+H+ + E + +V LI++Y+K +D A VF N++L ++ +W++L+ GY
Sbjct: 501 GRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYG 560
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR-QLHSLIIKMGFSSFT 313
G+ EA+ LF +M G +TF VL A + G H ++ G +
Sbjct: 561 MHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGA 620
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
++D + L E+++ M E V W AL++
Sbjct: 621 EHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSA 661
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 188/555 (33%), Positives = 300/555 (54%), Gaps = 3/555 (0%)
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
LI Y G A +FD R+ I+W S+++ Y C H +F + GV +
Sbjct: 47 LIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPN 106
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK-FVAMGLINLYAKC-EKLDLASRV 234
F+ ++VL AC L L G +H L K + +V L+++YA C + +D A V
Sbjct: 107 AFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLV 166
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F +I + +W+ LI GY A + +F +MF S +FS + A A + +
Sbjct: 167 FEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSS 226
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G+Q+H+ +I GF S V N +LD Y +C E+ + F EM + D ++WN LIAG
Sbjct: 227 NLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGF 286
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
Y E++ + M+ EG PN +T+++++ +++ + G+Q H I+ G D+N+
Sbjct: 287 ETLDSY-ESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNL 345
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +AL+DMYAKCG + D+ K+F + NLVSW +M++GY HG G+EA+++++ M +
Sbjct: 346 ELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGS 405
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
IKP+ F+ VLSAC H GLV+EG YF M + ++P D A VV L + G+ +
Sbjct: 406 GIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKE 465
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
AYE I++ P +P++ +W LL CK +K + + AA K+L P +++LSN A
Sbjct: 466 AYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVLLSNFSAA 525
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
W + A +RK+M+ KK+ G SW EL+N++ F ++ EV+ L H
Sbjct: 526 EGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNKEVCEVLELLIRH 585
Query: 655 LFDGGYVPDPIYSSH 669
+ D GYV D S+H
Sbjct: 586 MKDAGYVLDLDCSAH 600
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 257/510 (50%), Gaps = 18/510 (3%)
Query: 6 FHPNVIT--YNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
F+P +T L+ Y +A LFDEMP R+VI+W+++I+G++ A N
Sbjct: 35 FNPKDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNV 94
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLINMYG 122
F M+ ++PN +T + AC S GK +HG + G + +S +V N L++MY
Sbjct: 95 FTNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYA 154
Query: 123 K-CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
C + +A+ VF+ +N++SW +L++ Y + GL++F +S FS +
Sbjct: 155 TCCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFS 214
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ ACA +G+ +G Q+H+ V E + V ++++Y +C A ++F +
Sbjct: 215 IAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQK 274
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D W+ LI G+ L + E++ +F +M S G P+ TF+ V+ A A++ G+QLH
Sbjct: 275 DTITWNTLIAGFETL-DSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLH 333
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
II G + ++N ++D Y+KC + +S K F M ++VSW +++ G+ A H
Sbjct: 334 GGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGK 393
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSNVVI 416
EA++L +M+ G P+ + +L+ S ++ G + T V P D I
Sbjct: 394 EAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRD----I 449
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ +VD+ ++ GR+ +A ++ +++ K S L+G A + +++ + ++ ++
Sbjct: 450 YACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLG-ACKKYKQPSIQKLAALKVLEM 508
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
KPN +LS + E W F S+
Sbjct: 509 KPNKAGTYVLLS---NFSAAEGNWADFASL 535
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 171/351 (48%), Gaps = 27/351 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF N+ N +L MY + ++A++LF EM +++ I+W+ LI+GF + E +
Sbjct: 236 VINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLDSYE-S 294
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F MV PN +T+ ++ACA+ G+++HG + GL+ N +SN LI+M
Sbjct: 295 LCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDM 354
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHG---LKIFLLSRKSGVAISE 177
Y KCG ++ + +F N +SW S++ Y G H HG + +F SG+ +
Sbjct: 355 YAKCGNVADSHKIFSGMRHTNLVSWTSMMIGY---GAHGHGKEAVDLFNEMVGSGIKPDK 411
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+VL AC+ G + G++ L+ + A + D + +++L ++ ++ A +
Sbjct: 412 IVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYAC--VVDLLSRAGRVKEAYEL 469
Query: 235 FSNIQL-PDLTAWSALIGG---YAQ--LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
N+ PD + W AL+G Y Q + K L +K +G FS G +
Sbjct: 470 IENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVLLSNFSAAEGNW 529
Query: 289 AD-------VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK--CELLE 330
AD ++ T +++ I++ +F+ + D +K CE+LE
Sbjct: 530 ADFASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNKEVCEVLE 580
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/496 (36%), Positives = 281/496 (56%), Gaps = 3/496 (0%)
Query: 170 KSGVAISEFSCAS-VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI-NLYAKCEK 227
+ G + +++ S +L C LG ++ G +H+ + + V +I N+YAKC
Sbjct: 79 QRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGC 138
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
LD A R+F + D+ W+ALI G++Q + +A+ LF +M G P+ T S +L A
Sbjct: 139 LDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKA 198
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
G QLH+ +K G+ S +V + ++D Y++C ++ + FD M VSW
Sbjct: 199 SGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSW 258
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
NALI+GH A+ LL M + P +TYS++L+ + I A+E GK H ++K
Sbjct: 259 NALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIK 318
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
G IG+ L+DMYAK G ++DA++VFD L ++VSWNTML G AQHGLG+E L+
Sbjct: 319 SGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDR 378
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA 527
+ M I+PN+ +F+ VL+AC H GL++EG +YF +++ + + P + H + V L
Sbjct: 379 FEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYF-ELMKKYKVEPDVPHYVTFVDLLG 437
Query: 528 CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIM 587
G RA FI+ PIEP VW LL C+ HK++ LG YAAE+ DP D+ ++
Sbjct: 438 RVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRML 497
Query: 588 LSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEV 647
LSN+YA A W + AKVRK+MKE +KK CSW E++N +H F + + ++
Sbjct: 498 LSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGK 557
Query: 648 MNQLSVHLFDGGYVPD 663
++S + + GYVPD
Sbjct: 558 WEEISGKIKEIGYVPD 573
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 190/371 (51%), Gaps = 33/371 (8%)
Query: 14 NHLLL------MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
NHL+L MY K ++DA+++FDEMP +++++W+ALI+GFSQ P AL F M
Sbjct: 121 NHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQM 180
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
+ +PN++T + A S G ++H + G + + +V + L++MY +CG +
Sbjct: 181 LRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHM 240
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+AQ FD ++ +SW +L+S + + GE H L + ++ + F+ +SVL AC
Sbjct: 241 DAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSAC 300
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A +G L+ G +H+ + K L+ F+ L+++YAK +D A RVF + PD+ +W+
Sbjct: 301 ASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWN 360
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
++ G AQ G E +D F +M G+ P+E++F VL A + HS ++
Sbjct: 361 TMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACS-----------HSGLLDE 409
Query: 308 GFSSFTFVAN-----------TVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHL 355
G F + T +D + LL+ + + EM E W AL L
Sbjct: 410 GLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGAL----L 465
Query: 356 ASCHYGEAIEL 366
+C + +EL
Sbjct: 466 GACRMHKNMEL 476
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 212/468 (45%), Gaps = 10/468 (2%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH--VSNCLINMYGKCGLLSS 129
L P+Y Y + C G G+ +H + S L++H + N ++NMY KCG L
Sbjct: 83 LVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNIIVNMYAKCGCLDD 141
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A+ +FD ++ ++W +L++ + Q L +F + G + F+ +S+L A
Sbjct: 142 ARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGS 201
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
L G Q+H+ K + +V L+++YA+C +D A F + +W+AL
Sbjct: 202 EHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNAL 261
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I G+A+ G+ A+ L KM P+ T+S VL A A + G+ +H+ +IK G
Sbjct: 262 ISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGL 321
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
F+ NT+LD Y+K ++++ + FD + + DVVSWN ++ G E ++ +
Sbjct: 322 KLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQ 381
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
ML G PN ++ +L S ++ G + K + +V VD+ + G
Sbjct: 382 MLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGL 441
Query: 430 LNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
L+ A + + + + W +L H L +Y+ + ++ P+D+ +LS
Sbjct: 442 LDRAERFIREMPIEPTAAVWGALLGACRMH--KNMELGVYAAERAFELDPHDSGPRMLLS 499
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMD----HIASVVHLFACRGQT 532
M+++ G+ + I + VHLF +T
Sbjct: 500 NIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDET 547
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/662 (29%), Positives = 354/662 (53%), Gaps = 4/662 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDE--MPERNVISWSALISGFSQIGMPEV 59
+ G+ V N L+ MY K + A+ LFD M + + +SW+++IS G
Sbjct: 175 VKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLE 234
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL+ FR M +E N YT+V A+ AC + G+ IH + +S + +VSN LI
Sbjct: 235 ALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIA 294
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY CG + A+ VF + L ++ +SW +LLS Q + + F + SG + S
Sbjct: 295 MYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVS 354
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+++ A NL GM++H+ K ++ + + LI++Y KC + F +
Sbjct: 355 VLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP 414
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
DL +W+ +I GYAQ +A++L K+ + + +L A + +K ++
Sbjct: 415 EKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKE 474
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H ++K G + + N +++ Y + L++ + F+ ++ D+VSW ++I + +
Sbjct: 475 IHGYVLKGGLADI-LIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGL 533
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA+EL ++ P+L T ++L ++ + +++ GK+ H +++ GF +I ++
Sbjct: 534 AIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANS 593
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMYA+CG + +AR +F+++ ++L+ W +M+ HG G++A++++S M + + P+
Sbjct: 594 LVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPD 653
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ +L AC H GLV EG +F M ++ + P +H A +V L A AY F+
Sbjct: 654 HITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFV 713
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
++ PIEP+ VW LL C+ H + LG AA+K+L + E++ ++++SN +A W+
Sbjct: 714 RNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWN 773
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD-G 658
+ +VR IMK LKK GCSW E++NK+H F + Q +++ + Q + L + G
Sbjct: 774 DVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKG 833
Query: 659 GY 660
GY
Sbjct: 834 GY 835
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 150/509 (29%), Positives = 268/509 (52%), Gaps = 5/509 (0%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
T + +V + MY K DA K+FD+M ER + +W+A+I G A+
Sbjct: 75 TQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIE 134
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
++ M + + +T+ + AC + + R G EIHG + G V N LI MY
Sbjct: 135 LYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYA 194
Query: 123 KCGLLSSAQFVFDASL--ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
KCG L A+ +FD+ L + + +SW S++S++ GE + L +F ++ GV + ++
Sbjct: 195 KCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTF 254
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S L AC +K+G IH+++ K D +V+ LI +YA C +++ A RVF ++
Sbjct: 255 VSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLF 314
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +W+ L+ G Q +AI+ F M SG P +V+ ++ A + G ++
Sbjct: 315 KDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEV 374
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS-CH 359
H+ IK G S + N+++D Y KC ++ F+ M E D++SW +IAG+ + CH
Sbjct: 375 HAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECH 434
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A+ LL+ + E + +IL S + + + K+ H ++K G ++++I +A
Sbjct: 435 L-DALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNA 492
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
+V++Y + ++ AR VF+ ++SK++VSW +M+ +GL EALE+++ + E I+P+
Sbjct: 493 IVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPD 552
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
T + VL A + +++G +IR
Sbjct: 553 LITLVSVLYAAAALSSLKKGKEIHGFLIR 581
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 212/420 (50%), Gaps = 3/420 (0%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLINMYGKCGLLSSAQF 132
P Y A+ CAS G+++H ++ L+S + ++MYGKCG A
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VFD ER +W +++ + G +V ++++ R GV++ F+ VL AC
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKE 163
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN--IQLPDLTAWSALI 250
++G +IH + KC FV LI +YAKC L A +F + ++ D +W+++I
Sbjct: 164 RRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSII 223
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
+ G++ EA+ LF +M G+ + TF L A GR +H++I+K
Sbjct: 224 SAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHF 283
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
+ +V+N ++ Y+ C +E++ + F M D VSWN L++G + + Y +AI +DM
Sbjct: 284 TDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDM 343
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
G P+ + N++ S + G + H +K G DSN+ IG++L+DMY KC +
Sbjct: 344 QDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCV 403
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
F+++ K+L+SW T++ GYAQ+ +AL + +Q K+ + +L AC
Sbjct: 404 KYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLAC 463
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 217/435 (49%), Gaps = 4/435 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S +V N L+ MY ++ DA+++F M ++ +SW+ L+SG Q M A
Sbjct: 277 ILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDA 336
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+N+F+ M +P+ + + ++A + +G E+H + G++ N H+ N LI+M
Sbjct: 337 INHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDM 396
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKC + F+ E++ ISW ++++ Y Q H+ L + + + +
Sbjct: 397 YGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMI 456
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L AC+ L + K+ +IH V K L D + ++N+Y + +D A VF +I
Sbjct: 457 GSILLACSGLKSEKLIKEIHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHVFESINS 515
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+++I G A EA++LF + + + P +T VL A A + G+++
Sbjct: 516 KDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEI 575
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +I+ GF +AN+++D Y++C +E + F+ + + D++ W ++I +
Sbjct: 576 HGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCG 635
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--S 418
+AI+L M E P+ T+ +L S + GKQ H I+K + +
Sbjct: 636 KDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQ-HFEIMKNEYKLEPWPEHYA 694
Query: 419 ALVDMYAKCGRLNDA 433
LVD+ A+ L +A
Sbjct: 695 CLVDLLARSNSLEEA 709
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 136/291 (46%), Gaps = 17/291 (5%)
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIK-MGFSSFTFVANTVLDFYSKCELLEESLK 334
P + +S L A K G+QLH+ +K + F+ + Y KC +++K
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
FD+M E + +WNA+I +++ Y EAIEL K+M G + +T+ +L
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKE 163
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH--LSSKNLVSWNTML 452
G + H VK G+ V + +AL+ MYAKCG L AR +FD + + VSWN+++
Sbjct: 164 RRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSII 223
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
+ G EAL ++ MQE ++ N TF+ L AC EG + H +
Sbjct: 224 SAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQAC-------EGPTFIKIGRGIHAV 276
Query: 513 SPRMDHIASV------VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ +H V + ++A GQ A KS + + V W LLSG
Sbjct: 277 ILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFK-DCVSWNTLLSG 326
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/627 (31%), Positives = 336/627 (53%), Gaps = 5/627 (0%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F P V + L+ YV ++ A++ + P R+ +SW+AL++ +++ G + F
Sbjct: 194 FDPYV--SSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFD 251
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
+V E + YT + C G A+SG+ +HG + + GLE + ++NCLI MY KC
Sbjct: 252 KLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCL 311
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
A VF E + + ++S + + IF+ GV ++++ +
Sbjct: 312 SAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAI 371
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
+ G++ + IH+ + K K V ++ +Y K + A F +Q PD+ +
Sbjct: 372 VASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIAS 431
Query: 246 WSALIGGYAQLGKACE-AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+ L+ G+ G CE + +F ++ G++ ++ T+ +L + + G Q+H+ +
Sbjct: 432 WNTLLSGFYS-GNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACV 490
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K GF V+ +LD Y + + FD + E DV SW +++ + + +AI
Sbjct: 491 LKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAI 550
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
E + ML E PN T + L++ SD+ + G Q H +K G++S+VV SALVDMY
Sbjct: 551 ECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSVV-SSALVDMY 609
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG L DA +FD + +LV WNT++ GYAQHG G +ALE + M + P++ TF+
Sbjct: 610 VKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFV 669
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVLSAC H GL++EG YF + +GI+P ++H A +V + A G+ A I P+
Sbjct: 670 GVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPL 729
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
P+ +W+ +L C+ H ++ + AAEK+ + P+D S+ I+LSN+YA+ W++ AK+
Sbjct: 730 TPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDDISSCILLSNIYADLKRWNDVAKL 789
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYF 631
R ++ ++ +KK+ GCSW E+ K+H F
Sbjct: 790 RSMLVDRGVKKEPGCSWIEINGKLHVF 816
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 156/509 (30%), Positives = 266/509 (52%), Gaps = 2/509 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG P+ ++ LL MY K R+ DA+ +FD MP R+V++W+A++S + G A
Sbjct: 86 LLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAA 145
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + PN + A+ AC D ++H + + + +VS+ L+
Sbjct: 146 LRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEA 205
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y CG + A+ S R+ +SW +LL+ Y + G++ + +F +SG IS+++
Sbjct: 206 YVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTL 265
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL C LG K G +H LV K LE D+ + LI +Y+KC + A VF+ I
Sbjct: 266 PTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDE 325
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
PD+ S +I + + A EA D+F++M G+ P++ TF + + + R +
Sbjct: 326 PDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSI 385
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ I+K GFS V + ++ Y K +++++ FD M D+ SWN L++G + +
Sbjct: 386 HAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNC 445
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ + K+++ EG N YTY IL + + + +G Q H C++K GF + + L
Sbjct: 446 EHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKML 505
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPN 479
+DMY + G +AR VFD L +++ SW ++ YA+ G +A+E + SM++ENK +PN
Sbjct: 506 LDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENK-RPN 564
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
D T LS C + + G + I+
Sbjct: 565 DATLATSLSVCSDLACLGSGLQLHSYTIK 593
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 208/416 (50%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
+Y A+ CA+ R GK +H R+ RSG ++ + + L+NMY KCG L+ A+ VFD
Sbjct: 62 SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
R+ ++W +++S+ G+ L++F + GV + F+ A+ L AC V +L
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTP 181
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+H+ K FD +V+ L+ Y C ++D+A R + + +W+AL+ YA+ G
Sbjct: 182 QVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDG 241
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+ + +F K+ SG S+ T VL ++ G+ +H L+IK G + + N
Sbjct: 242 DYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNN 301
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
+++ YSKC E++ + F +DE DVV + +I+ EA ++ M G P
Sbjct: 302 CLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKP 361
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
N YT+ + ++S + + H IVK GF + A+V MY K G + DA F
Sbjct: 362 NQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAF 421
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
D + ++ SWNT+L G+ L I+ + + N T++G+L C +
Sbjct: 422 DLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSL 477
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
L +Y+ L + A+ GK H +++ G + + +L++MY KCGRL DAR VF
Sbjct: 59 ELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVF 118
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D + +++V+W M+ G AL +++ M E + PN L AC
Sbjct: 119 DGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKAC------- 171
Query: 498 EGWHYFNSMIRDHGISPRMDHIA-------------SVVHLFACRGQTRRAYEFIKSSPI 544
++ D G +P++ A S+V + G+ A + SP+
Sbjct: 172 -------TVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPV 224
Query: 545 EPNKVVWRCLLS 556
+ V W LL+
Sbjct: 225 RSD-VSWNALLN 235
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 346/638 (54%), Gaps = 7/638 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + F P + N+LL MY K A KLFD+M + N++++++LISG+ Q+ +
Sbjct: 85 MIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKV 144
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F L+ + YT GA++AC+ G+ +GK IHG + GL ++N LI+M
Sbjct: 145 MILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDM 204
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A+ +FD S + + +SW SL++ Y Q G++ L I ++G+A + ++
Sbjct: 205 YSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTL 264
Query: 181 ASVLGACA--VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S L AC+ G G +H K L D V L+++YAK LD A ++F +
Sbjct: 265 GSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQM 324
Query: 239 QLPDLTAWSALIGGYAQLGK-----ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
++ ++A++ G Q A +A++LF +M S G+ PS T+S +L A V++
Sbjct: 325 VDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVED 384
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
+Q+H+L+ K G S ++ + ++D YS + ++L F+ + +V A+I G
Sbjct: 385 FKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXG 444
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+L + + A+ L ++L P+ + S I++ +++ + G+Q K G
Sbjct: 445 YLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRF 504
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ ++ + MYAK G L A F + + ++VSW+TM+ AQHG EAL + +M+
Sbjct: 505 TIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKS 564
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
I+PN F+GVL AC H GLVEEG YF++M +D+ + + H VV L G+
Sbjct: 565 CGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLA 624
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A I E V+WR LLS C+ HKD V + A+K++ +P ++++++L N+Y
Sbjct: 625 DAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYM 684
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+A +KVR +M+E+ +KK+ G SW ++ +K++ F
Sbjct: 685 DAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSF 722
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/530 (28%), Positives = 254/530 (47%), Gaps = 47/530 (8%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
YV V + G GK +H M ++ + N L+NMY KCG SA +FD
Sbjct: 62 YVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMS 121
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
+ N +++ SL+S Y Q + +F +R+ G+ + +++CA L AC+ GNL G
Sbjct: 122 KSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKM 181
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
IH L+ L + LI++Y+KC ++D A +F + D +W++LI GY Q GK
Sbjct: 182 IHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGK 241
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGA----FADVKETIGGRQLHSLIIKMGFSSFTF 314
E + + KM +GL + T L A F K + G LH IK+G
Sbjct: 242 YEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCK--MFGTMLHDHAIKLGLHLDVV 299
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS------CHYGEAIELLK 368
V +LD Y+K L+++++ FD+M + +VV +NA++AG L C Y +A+ L
Sbjct: 300 VGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAY-KALNLFF 358
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+M G P+++TYS++L + ++ KQ H + K G S+ IGS L+D+Y+ G
Sbjct: 359 EMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLG 418
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ DA F+ + + +V M+ GY Q+G AL ++ + + KP++ ++S
Sbjct: 419 SMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMS 478
Query: 489 ACVHIGLVEEG-----------------------WHYFNS-------MIRDHGISPRMDH 518
+C ++G++ G W Y S + +P +
Sbjct: 479 SCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVS 538
Query: 519 IASVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
++++ A G + R +E +KS IEPN + +L C +H+ LV
Sbjct: 539 WSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIAC-SHRGLV 587
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 151/313 (48%), Gaps = 10/313 (3%)
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I +A LG + +SS + V + ++ + + G+ +HS +IK F
Sbjct: 31 IESFATLGSVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSF 90
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
F+ N +L+ Y KC + K FD+M + ++V++N+LI+G++ + + + L
Sbjct: 91 RPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDK 150
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
G + YT + L S + GK H I+ G S VV+ ++L+DMY+KCG+
Sbjct: 151 ARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQ 210
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
++ AR +FDH + VSWN+++ GY Q+G E L I M +N + N T L A
Sbjct: 211 VDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKA 270
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV-----HLFACRGQTRRAYEFIKSSPI 544
C G F +M+ DH I + H+ VV ++A G A + I +
Sbjct: 271 CSS---NFNGCKMFGTMLHDHAIKLGL-HLDVVVGTALLDMYAKTGSLDDAIQ-IFDQMV 325
Query: 545 EPNKVVWRCLLSG 557
+ N V++ +++G
Sbjct: 326 DKNVVMYNAMMAG 338
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/588 (33%), Positives = 311/588 (52%), Gaps = 11/588 (1%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNC-LINMYGKCGLLSSAQFVFDASLERN 141
+ AC R D G+ +H + S N V N +I MY CG S ++ VFD +N
Sbjct: 112 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 171
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE-----FSCASVLGACAVLGNLKVG 196
W +++S+Y + + IF ++++E F+ V+ ACA L +L +G
Sbjct: 172 LFQWNAIVSAYTRNELFEDAMSIF----SELISVTEHKPDNFTLPCVIKACAGLLDLGLG 227
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA-SRVFSNIQLPDLTAWSALIGGYAQ 255
IH + K L D FV LI +Y KC ++ A RVF + +++W+AL+ GYAQ
Sbjct: 228 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQ 287
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
+A+DL+++M SGL P T +L A + +K G ++H ++ G + F+
Sbjct: 288 NSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFI 347
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
++L Y C + FD M+ +VSWN +IAG+ + EAI L + ML +G
Sbjct: 348 GISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGI 407
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P + S + A+ GK+ HC +K ++ + S+++DMYAK G + +++
Sbjct: 408 QPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQR 467
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+FD L K++ SWN ++ GY HG G+EALE++ M +KP+D TF G+L AC H GL
Sbjct: 468 IFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGL 527
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
VE+G YFN M+ H I P+++H VV + G+ A I+ P +P+ +W LL
Sbjct: 528 VEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLL 587
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
S C+ H +L LG A K+L +PE ++++SN++A + WD+ +VR MK+ L+K
Sbjct: 588 SSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQK 647
Query: 616 DTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
D GCSW E+ K+H F + ++ E +L V + GY PD
Sbjct: 648 DAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPD 695
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 249/496 (50%), Gaps = 13/496 (2%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
++ F + + ++ MY +D++ +FD++ +N+ W+A++S +++ + E A++
Sbjct: 134 STQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMS 193
Query: 63 YFRLMVCCVL-EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F ++ +P+ +T + ACA D G+ IHG + L + V N LI MY
Sbjct: 194 IFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMY 253
Query: 122 GKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
GKCGL+ A + VFD + SW +LL Y Q + L ++L SG+ F+
Sbjct: 254 GKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTI 313
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L AC+ + +L G +IH + L D F+ + L++LY C K A +F ++
Sbjct: 314 GSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEH 373
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
L +W+ +I GY+Q G EAI+LF +M S G+ P E+ V GA + + G++L
Sbjct: 374 RSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKEL 433
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +K + FV+++++D Y+K + S + FD + E DV SWN +IAG+
Sbjct: 434 HCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRG 493
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVV 415
EA+EL + ML G P+ +T++ IL S +E G + + ++P +
Sbjct: 494 KEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTC 553
Query: 416 IGSALVDMYAKCGRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHG-LGREALEIYSMMQE 473
+ VDM + GR++DA ++ + + + W+++L HG LG +++
Sbjct: 554 V----VDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLEL 609
Query: 474 NKIKPNDNTFIGVLSA 489
KP + I L A
Sbjct: 610 EPEKPENYVLISNLFA 625
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 211/667 (31%), Positives = 344/667 (51%), Gaps = 11/667 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S NV L+ +Y + A+ FD + R+V +W+ +ISG+ + G
Sbjct: 77 LVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEV 136
Query: 61 LNYFRL-MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ F L M+ L+P+Y T+ + AC + D G +IH + G + +V+ LI+
Sbjct: 137 IRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIH 193
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y + G + +A+ +FD R+ SW +++S YCQ G L + R A+ +
Sbjct: 194 LYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLR----AMDSVT 249
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L AC G+ G+ IHS K LE + FV+ LI+LYA+ L +VF +
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMY 309
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ DL +W+++I Y + AI LF +M S + P +T + + + E R
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRS 369
Query: 300 LHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+ ++ G F + N V+ Y+K L++ + F+ + DV+SWN +I+G+ +
Sbjct: 370 VQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNG 429
Query: 359 HYGEAIELLKDMLFEGH--CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
EAIE+ M EG N T+ ++L S A+ G + H ++K G +V +
Sbjct: 430 FASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 489
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
G++L DMY KCGRL+DA +F + N V WNT++ + HG G +A+ ++ M + +
Sbjct: 490 GTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 549
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+ TF+ +LSAC H GLV+EG F M D+GI+P + H +V L+ GQ A
Sbjct: 550 KPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIAL 609
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
FIKS P++P+ +W LLS C+ H ++ LG+ A+E + +PE H++LSN+YA A
Sbjct: 610 NFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAG 669
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W+ ++R I K L+K G S E+ NK+ F T +++ + L L
Sbjct: 670 KWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLK 729
Query: 657 DGGYVPD 663
GYVPD
Sbjct: 730 MVGYVPD 736
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 255/513 (49%), Gaps = 51/513 (9%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
+S K +H R+ S N +S L+N+Y G ++ A++ FD R+ +W ++S Y
Sbjct: 68 QSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGY 127
Query: 153 CQCG---EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ G E + +F+LS SG+ + SVL AC N+ G +IH L K
Sbjct: 128 GRAGYSSEVIRCFSLFMLS--SGLQPDYRTFPSVLKACR---NVTDGNKIHCLALKFGFM 182
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
+D +VA LI+LY + + A +F + D+ +W+A+I GY Q G A EA+ L
Sbjct: 183 WDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTL---- 238
Query: 270 FSSGLMPSE-VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
S GL + VT +L A + + G +HS IK G S FV+N ++D Y++
Sbjct: 239 -SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGS 297
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
L++ K FD M D++SWN++I + + AI L ++M P+ T ++ +I
Sbjct: 298 LKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASI 357
Query: 389 SSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
S + I + ++ G F ++ IG+A+V MYAK G ++ AR VF+ L +K+++S
Sbjct: 358 LSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVIS 417
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQE--NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
WNT++ GYAQ+G EA+E+Y++M+E +I N T++ VL AC G + +G
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGR 477
Query: 506 MIRD---------------HGISPRMDHIASVVH------------LFAC---RGQTRRA 535
++++ +G R+D S+ + L AC G +A
Sbjct: 478 LLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKA 537
Query: 536 YEFIK---SSPIEPNKVVWRCLLSGCKTHKDLV 565
K ++P+ + + LLS C +H LV
Sbjct: 538 VMLFKEMLDEGVKPDHITFVTLLSAC-SHSGLV 569
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
++ K H +V NV I + LV++Y G + AR FDH+ ++++ +WN M+ G
Sbjct: 67 LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISG 126
Query: 455 YAQHGLGREALEIYSM-MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
Y + G E + +S+ M + ++P+ TF VL AC + V +G + + + G
Sbjct: 127 YGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDG-NKIHCLALKFGFM 182
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ AS++HL+ G A P + W ++SG
Sbjct: 183 WDVYVAASLIHLYCRYGAVVNARILFDEMPTR-DMGSWNAMISG 225
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/665 (29%), Positives = 351/665 (52%), Gaps = 42/665 (6%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
P VI N + +++ R+ DA++LF MP R+ +++A+++G+S G +A + FR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 66 LMVCCVLEPNYYTY---VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+ P+ Y+Y + A++ +S DAR ++ +S N +I+ +
Sbjct: 94 ----AIPRPDNYSYNTLLHALAVSSSLADARG-------LFDEMPVRDSVTYNVMISSHA 142
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
GL+S A+ FD + E++++SW +L++Y + G +F S S +
Sbjct: 143 NHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDVISWNA 198
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINL------YAKCEKLDLASRVFS 236
++ G + ++ FD+ +++ YA+ + A R+F
Sbjct: 199 LMSGYVQWGKMSEAREL----------FDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD 248
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ D+ W+A++ GYAQ G EA +F M + V+++ ++ A+ +
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDE 304
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
++L +++ +S+ NT+L Y++ +LEE+ FD M + D VSW A++A +
Sbjct: 305 AKELFNMMPCRNVASW----NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQ 360
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
E ++L +M G N ++ +L+ +DI A+E G Q H +++ G+ +
Sbjct: 361 GGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFV 420
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
G+AL+ MY KCG + DAR F+ + +++VSWNTM+ GYA+HG G+EALEI+ MM+
Sbjct: 421 GNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTST 480
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+D T +GVL+AC H GLVE+G YF SM D G++ + +H ++ L G+ A+
Sbjct: 481 KPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAH 540
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+ +K P EP+ +W LL + H++ LGR AAEKI +PE+ +++LSN+YA +
Sbjct: 541 DLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSG 600
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W + K+R +M+E+ +KK G SW E+QNK+H FS + ++ + L + +
Sbjct: 601 KWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMK 660
Query: 657 DGGYV 661
GYV
Sbjct: 661 KAGYV 665
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G+ N LL MY K + DA+ F+EM ER+V+SW+ +I+G+++ G + A
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F +M +P+ T VG ++AC+ G G M+ G+ C+I+
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 120 MYGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
+ G+ G L+ A + D E +S W +LL +
Sbjct: 529 LLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGA 561
>gi|225457491|ref|XP_002267777.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070
[Vitis vinifera]
gi|296087996|emb|CBI35279.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 191/555 (34%), Positives = 304/555 (54%), Gaps = 16/555 (2%)
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV 146
A D++ G+ +H ++ + L + ++N ++NMY KCG L A +FD RN++SW
Sbjct: 46 AETRDSQHGRALHAKLIKGPLHNSLFLNNHILNMYAKCGHLPHAHKLFDHFPHRNAVSWS 105
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN-------------L 193
L++ + Q L +F +GV I+EF+ S L AC++ N L
Sbjct: 106 VLIAGFVQHNRPSCALVLFSQMHAAGVNINEFTLVSALHACSLYDNDSDNNEGYYYSYYL 165
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
Q+++ V + E++ F+ + + KL A VF + D+ +W+A++ G
Sbjct: 166 SRLYQVYAFVVRLGFEWNVFLMNVFMTALIRSRKLAEALEVFEACRGKDVVSWNAVMAGL 225
Query: 254 AQLGKAC-EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Q C E + +M G+ P FS VL A + + G Q+H ++K G
Sbjct: 226 VQF--CCGEVPGFWRRMCCEGVKPDNFAFSGVLSGLAALGDGGMGVQVHGQLVKCGHGGE 283
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+ N+++D Y KC LE +K F+EM E DV +WN + AG L G A+EL+++M
Sbjct: 284 VCIGNSLVDMYLKCGSLENGIKAFEEMVERDVCTWNQMAAGCLNCGKPGRALELIEEMRR 343
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
G N +T + L +++ ++E GK+ H +K G D +V + +AL+DMYAKCG + D
Sbjct: 344 SGVRMNKFTLATALTACANLASLEEGKKAHGLRIKLGNDVDVCVDNALLDMYAKCGSMGD 403
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A KVF + ++++VSW TM++G+AQ+G R+ALEI+ M+ PN TFI VL AC
Sbjct: 404 ALKVFGTVEARSVVSWTTMIMGFAQNGQARKALEIFEQMRAEGKAPNYITFICVLYACSQ 463
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
GL+ EGW YF SM RDHGISP DH A +V + G + A E I+ P + + +VW+
Sbjct: 464 GGLINEGWEYFLSMDRDHGISPGEDHYACMVDMLGRAGHIKEARELIRRMPFQASVLVWQ 523
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL C+ H D+ G AA++ LS D D+S +++LSN++A+ W +R++M+ +
Sbjct: 524 TLLGACRVHGDVETGLLAAKQALSLDKHDSSTYVVLSNMFADGRNWKGVGSLRELMETRD 583
Query: 613 LKKDTGCSWTELQNK 627
+KK G SW +L +
Sbjct: 584 VKKMPGSSWIQLNKR 598
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 225/480 (46%), Gaps = 28/480 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I H ++ NH+L MY K + A KLFD P RN +SWS LI+GF Q P A
Sbjct: 61 LIKGPLHNSLFLNNHILNMYAKCGHLPHAHKLFDHFPHRNAVSWSVLIAGFVQHNRPSCA 120
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACA---SRGDARSG----------KEIHGRMYRSGL 107
L F M + N +T V A+ AC+ + D G +++ + R G
Sbjct: 121 LVLFSQMHAAGVNINEFTLVSALHACSLYDNDSDNNEGYYYSYYLSRLYQVYAFVVRLGF 180
Query: 108 ELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ--CGEHVHGLKIF 165
E N + N + + L+ A VF+A ++ +SW ++++ Q CGE V G
Sbjct: 181 EWNVFLMNVFMTALIRSRKLAEALEVFEACRGKDVVSWNAVMAGLVQFCCGE-VPGFWRR 239
Query: 166 LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC 225
+ GV F+ + VL A LG+ +G+Q+H + KC + + L+++Y KC
Sbjct: 240 MCC--EGVKPDNFAFSGVLSGLAALGDGGMGVQVHGQLVKCGHGGEVCIGNSLVDMYLKC 297
Query: 226 EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
L+ + F + D+ W+ + G GK A++L +M SG+ ++ T + L
Sbjct: 298 GSLENGIKAFEEMVERDVCTWNQMAAGCLNCGKPGRALELIEEMRRSGVRMNKFTLATAL 357
Query: 286 GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
A A++ G++ H L IK+G V N +LD Y+KC + ++LK F ++ VV
Sbjct: 358 TACANLASLEEGKKAHGLRIKLGNDVDVCVDNALLDMYAKCGSMGDALKVFGTVEARSVV 417
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
SW +I G + +A+E+ + M EG PN T+ +L S I G + +
Sbjct: 418 SWTTMIMGFAQNGQARKALEIFEQMRAEGKAPNYITFICVLYACSQGGLINEGWEYFLSM 477
Query: 406 -----VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+ PG D + +VDM + G + +AR++ + +++ W T+L HG
Sbjct: 478 DRDHGISPGEDHY----ACMVDMLGRAGHIKEARELIRRMPFQASVLVWQTLLGACRVHG 533
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 14/230 (6%)
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
E ++ +L FA+ +++ GR LH+ +IK + F+ N +L+ Y+KC L + K FD
Sbjct: 35 EDLYATLLRRFAETRDSQHGRALHAKLIKGPLHNSLFLNNHILNMYAKCGHLPHAHKLFD 94
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS------- 390
+ VSW+ LIAG + A+ L M G N +T + L+ S
Sbjct: 95 HFPHRNAVSWSVLIAGFVQHNRPSCALVLFSQMHAAGVNINEFTLVSALHACSLYDNDSD 154
Query: 391 ------DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
+ Q + +V+ GF+ NV + + + + +L +A +VF+ K+
Sbjct: 155 NNEGYYYSYYLSRLYQVYAFVVRLGFEWNVFLMNVFMTALIRSRKLAEALEVFEACRGKD 214
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+VSWN ++ G Q G E + M +KP++ F GVLS +G
Sbjct: 215 VVSWNAVMAGLVQFCCG-EVPGFWRRMCCEGVKPDNFAFSGVLSGLAALG 263
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/648 (30%), Positives = 347/648 (53%), Gaps = 11/648 (1%)
Query: 13 YNHLLLMYVKFSR--INDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC 70
+N LL Y + S + A+++FDE+P R+ +SW+AL++ + G A R M
Sbjct: 28 WNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQ 87
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
L N + A+ + A G ++ +SGL N ++ L+++Y KCG + A
Sbjct: 88 GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
+ VFD ERN++SW +L++ Y + G+ L++FL + G+A E + AS+L AV
Sbjct: 148 RQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLL--TAVE 205
Query: 191 GNLKVGM-QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-QLPDLTAWSA 248
G M Q+H + K V I Y++C L + R+F I + DL +W+A
Sbjct: 206 GPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNA 265
Query: 249 LIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFAD-VKETIGGRQLHSLIIK 306
++G Y G EA+ FV+M SG+ P +F+ ++ + ++ + GR +H L+IK
Sbjct: 266 MLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIK 325
Query: 307 MGFSSFTFVANTVLDFYSKCE---LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
T V N ++ Y++ ++E++ K F+ + D VSWN+++ G+ +A
Sbjct: 326 SALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADA 385
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
++ + M E + Y +S L SS++ ++ GKQ H ++ GF SN + S+L+ M
Sbjct: 386 LKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFM 445
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y+K G ++DARK F+ + V WN M+ GYAQHG +++ M + K + TF
Sbjct: 446 YSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITF 505
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+G++++C H GLV+EG N+M +G+ RM+H A V L+ GQ +A + I S P
Sbjct: 506 VGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMP 565
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
EP+ +VW LL C+ H ++ L A + +P S +++LS++Y+ MW + A
Sbjct: 566 FEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRAT 625
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
V+++MK++ L K G SW E++N++H F+ + + +++E++ L
Sbjct: 626 VQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 247/467 (52%), Gaps = 11/467 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG NV + LL +Y K R+ DA+++FD MPERN +SW+ALI+G+++ G AL
Sbjct: 120 LKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASAL 179
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M L P+ T+ ++A ++HG++ + G L V N I Y
Sbjct: 180 ELFLEMEREGLAPDEATFASLLTAVEGPS-CFLMHQLHGKIVKYGSALGLTVLNAAITAY 238
Query: 122 GKCGLLSSAQFVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
+CG L ++ +FD + R+ ISW ++L +Y G +K F+ + ++SGV +S
Sbjct: 239 SQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYS 298
Query: 180 CASVLGACAVLG-NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK---LDLASRVF 235
S++ +C+ G + G IH LV K ALE V LI +Y + + ++ A + F
Sbjct: 299 FTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCF 358
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+++ L D +W++++ GY+Q G + +A+ F M S + E FS L + +++
Sbjct: 359 NSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQ 418
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+Q+H L+I GF+S FV+++++ YSK +++++ K+F+E D+ V WNA+I G+
Sbjct: 419 LGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGY- 477
Query: 356 ASCHYGEAIELLKDMLFEGHCP-NLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSN 413
A E +++L + + + P + T+ ++ S ++ G + + K G
Sbjct: 478 AQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLR 537
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+ + VD+Y + G+L+ A+K+ D + + + W T+L HG
Sbjct: 538 MEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHG 584
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF N + L+ MY K I+DA+K F+E + + + W+A+I G++Q G E
Sbjct: 427 VIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENV 486
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM-YRSGLELNSHVSNCLIN 119
F M+ ++ T+VG +++C+ G G EI M + G+ L C ++
Sbjct: 487 DILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVD 546
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
+YG+ G L A+ + D+ E +++ W++LL +
Sbjct: 547 LYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGA 579
>gi|115461254|ref|NP_001054227.1| Os04g0672700 [Oryza sativa Japonica Group]
gi|70663948|emb|CAE54552.2| OSJNBb0004A17.12 [Oryza sativa Japonica Group]
gi|113565798|dbj|BAF16141.1| Os04g0672700 [Oryza sativa Japonica Group]
gi|125592028|gb|EAZ32378.1| hypothetical protein OsJ_16588 [Oryza sativa Japonica Group]
Length = 719
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 209/636 (32%), Positives = 331/636 (52%), Gaps = 14/636 (2%)
Query: 8 PNVITY--NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG--MPEVALNY 63
P + T+ N LL +Y + S + DA L P +V+S++ ++S S+ PE L
Sbjct: 50 PALTTFLANQLLSLYARLSAVPDALALLRSTPRPSVVSYNTVLSALSRAPRHAPE-GLRL 108
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
FR + L P + + D R+G H + G + V L+ MY +
Sbjct: 109 FRRLHASGLRPTAPSLCALLRTAGELRDRRAGAAAHSQAATLGFLASDIVPTALLQMYSQ 168
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG A VFD R+ ++W ++ + G L F + G+ +E + +SV
Sbjct: 169 CGAPRDANQVFDEMATRDGVAWNCVMHCNVRYGYLDRALGQFCRMVRGGLPPTESTLSSV 228
Query: 184 LGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
L C G+ G +H V K L+ D + L+++Y+ C LD A RVF I+ PD
Sbjct: 229 LSGCGRAGDCLRGRVLHGWVVKLEELDPDMPLQNALLDMYSSCGDLDTALRVFERIETPD 288
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKM----FSSGLMPSEVTFSYVLGAFADVKETIGGR 298
L +W+ LI G++ +G C A+ FV++ F ++P E T + V+ A A + GG+
Sbjct: 289 LVSWNTLIAGFSGVGDGCSAVHAFVQLKAVQFDERVVPDEYTLAAVVSASATLPAMFGGK 348
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
LH+ +IK G + FV NT+L+ Y + + FD + + DV+ W ++AGH +S
Sbjct: 349 PLHAEVIKAGLENSVFVGNTLLNMYFTNDDPHSARILFDSITQEDVIMWTEMVAGH-SSL 407
Query: 359 HYGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
GE A+ ML EG+ + ++ S+ LN ++++ ++ G+ H +VK G++ N+
Sbjct: 408 GEGELALRYFVSMLQEGYKVDSFSLSSALNSTTELAGLKQGEMLHAQVVKSGYEGNICAS 467
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+LVDMYAK G L A VF ++ +L WN+++ GY HG A +++ M + ++
Sbjct: 468 GSLVDMYAKNGALPGAYLVFRNIQRPDLKCWNSIIGGYGNHGNSEMAFKLFGEMIRDGLQ 527
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ T+I +LSAC H GLVE+G Y+ M+ D GI P H S+V L G A +
Sbjct: 528 PDHVTYISILSACSHCGLVEKGKFYWFCMMTD-GIVPGFKHYTSMVSLLGRAGLLDEAVD 586
Query: 538 FIKSSPIEPN-KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+ SP +WR LLS C T ++L +G +AAE+ L DP+D S HI+LSN+YA
Sbjct: 587 LMMKSPFAKKCPELWRILLSSCITFRNLSIGVHAAEQALEQDPDDISTHILLSNLYASLG 646
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
WD A++RK M+ K+ G SW E++N +H FS
Sbjct: 647 KWDFVAEIRKRMRGLMADKEPGLSWVEMKNVVHVFS 682
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 206/436 (47%), Gaps = 5/436 (1%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
T GF + I LL MY + DA ++FDEM R+ ++W+ ++ + G + AL
Sbjct: 149 TLGFLASDIVPTALLQMYSQCGAPRDANQVFDEMATRDGVAWNCVMHCNVRYGYLDRALG 208
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLINMY 121
F MV L P T +S C GD G+ +HG + + L+ + + N L++MY
Sbjct: 209 QFCRMVRGGLPPTESTLSSVLSGCGRAGDCLRGRVLHGWVVKLEELDPDMPLQNALLDMY 268
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL----LSRKSGVAISE 177
CG L +A VF+ + +SW +L++ + G+ + F+ + V E
Sbjct: 269 SSCGDLDTALRVFERIETPDLVSWNTLIAGFSGVGDGCSAVHAFVQLKAVQFDERVVPDE 328
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
++ A+V+ A A L + G +H+ V K LE FV L+N+Y + A +F +
Sbjct: 329 YTLAAVVSASATLPAMFGGKPLHAEVIKAGLENSVFVGNTLLNMYFTNDDPHSARILFDS 388
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
I D+ W+ ++ G++ LG+ A+ FV M G + S L + ++ G
Sbjct: 389 ITQEDVIMWTEMVAGHSSLGEGELALRYFVSMLQEGYKVDSFSLSSALNSTTELAGLKQG 448
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
LH+ ++K G+ + +++D Y+K L + F + D+ WN++I G+
Sbjct: 449 EMLHAQVVKSGYEGNICASGSLVDMYAKNGALPGAYLVFRNIQRPDLKCWNSIIGGYGNH 508
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+ A +L +M+ +G P+ TY +IL+ S +E GK C++ G
Sbjct: 509 GNSEMAFKLFGEMIRDGLQPDHVTYISILSACSHCGLVEKGKFYWFCMMTDGIVPGFKHY 568
Query: 418 SALVDMYAKCGRLNDA 433
+++V + + G L++A
Sbjct: 569 TSMVSLLGRAGLLDEA 584
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G +V N LL MY + A+ LFD + + +VI W+ +++G S +G E+A
Sbjct: 354 VIKAGLENSVFVGNTLLNMYFTNDDPHSARILFDSITQEDVIMWTEMVAGHSSLGEGELA 413
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L YF M+ + + ++ A+++ + G+ +H ++ +SG E N S L++M
Sbjct: 414 LRYFVSMLQEGYKVDSFSLSSALNSTTELAGLKQGEMLHAQVVKSGYEGNICASGSLVDM 473
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A VF + W S++ Y G K+F + G+ +
Sbjct: 474 YAKNGALPGAYLVFRNIQRPDLKCWNSIIGGYGNHGNSEMAFKLFGEMIRDGLQPDHVTY 533
Query: 181 ASVLGACAVLGNLKVG 196
S+L AC+ G ++ G
Sbjct: 534 ISILSACSHCGLVEKG 549
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG+ N+ L+ MY K + A +F + ++ W+++I G+ G E+A
Sbjct: 455 VVKSGYEGNICASGSLVDMYAKNGALPGAYLVFRNIQRPDLKCWNSIIGGYGNHGNSEMA 514
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M+ L+P++ TY+ +SAC+ G GK M G+ ++++
Sbjct: 515 FKLFGEMIRDGLQPDHVTYISILSACSHCGLVEKGKFYWFCMMTDGIVPGFKHYTSMVSL 574
Query: 121 YGKCGLLSSA 130
G+ GLL A
Sbjct: 575 LGRAGLLDEA 584
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 213/712 (29%), Positives = 355/712 (49%), Gaps = 58/712 (8%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPER--NVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
+L+ Y+ + A L + +P +V W+ LI +G P +R M
Sbjct: 195 TNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLG 254
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
P++YT+ ACA+ G +H + RSG N V N +++MYGKCG L A
Sbjct: 255 WTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAH 314
Query: 132 FVFDASLER---NSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGAC 187
+FD R + +SW S++S+Y + L +F ++ + ++ S ++L AC
Sbjct: 315 NMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPAC 374
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS----------- 236
A L G Q+H + L D FV ++++YAKC K++ A++VF
Sbjct: 375 ASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWN 434
Query: 237 -------------------------NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
NI+L D+ W+A+I GYAQ G+ CEA+D+F +M
Sbjct: 435 AMVTGYSQAGRLEHALSLFERMTEENIEL-DVVTWTAVITGYAQRGQGCEALDVFRQMCD 493
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM---------GFSSFTFVANTVLDF 322
G P+ VT +L A V + G++ H IK G V N ++D
Sbjct: 494 CGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLK-VINGLIDM 552
Query: 323 YSKCELLEESLKTFDEMD--EHDVVSWNALIAGHLASCHYGEAIELLKDM--LFEGHCPN 378
Y+KC+ E + K FD + + DVV+W +I G+ A++L M + + PN
Sbjct: 553 YAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPN 612
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV-IGSALVDMYAKCGRLNDARKVF 437
+T S L + + A+ +G+Q H +++ + S ++ + + L+DMY+K G ++ A+ VF
Sbjct: 613 DFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVF 672
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D++ +N VSW +++ GY HG G +AL ++ M++ + P+ TF+ VL AC H G+V+
Sbjct: 673 DNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVD 732
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G ++FN M +D G+ P +H A +V L+ G+ A + I P+EP VVW LLS
Sbjct: 733 HGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSA 792
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
C+ H ++ LG +AA ++L + + ++ +LSN+YA A W + A++R MK +KK
Sbjct: 793 CRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRP 852
Query: 618 GCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
GCSW + + + F + Q ++E + L + GYVP ++ H
Sbjct: 853 GCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALH 904
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 231/503 (45%), Gaps = 54/503 (10%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNV---ISWSALISGFSQIGMPEVA 60
SGF NV N ++ MY K + A +FD++ R + +SW++++S + A
Sbjct: 288 SGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTA 347
Query: 61 LNYFRLMVCC-VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L F M ++ P+ + V + ACAS + G+++HG RSGL + V N +++
Sbjct: 348 LALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVD 407
Query: 120 MYGKCGLLSSAQFVF-----------------------------------DASLERNSIS 144
MY KCG + A VF + ++E + ++
Sbjct: 408 MYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVT 467
Query: 145 WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF 204
W ++++ Y Q G+ L +F G + + S+L AC +G L G + H
Sbjct: 468 WTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAI 527
Query: 205 KCALEFDK--------FVAMGLINLYAKCEKLDLASRVFSNIQLP--DLTAWSALIGGYA 254
K L D V GLI++YAKC+ ++A ++F ++ D+ W+ +IGGYA
Sbjct: 528 KFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYA 587
Query: 255 QLGKACEAIDLFVKMFS--SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS- 311
Q G A A+ LF MF + P++ T S L A A + GRQ+H+ +++ + S
Sbjct: 588 QHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSV 647
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
FVAN ++D YSK ++ + FD M + + VSW +L+ G+ +A+ + +M
Sbjct: 648 MLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMR 707
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRL 430
P+ T+ +L S ++ G + K G D + +VD++ + GRL
Sbjct: 708 KVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRL 767
Query: 431 NDARKVFDHLS-SKNLVSWNTML 452
+A K+ + + V W +L
Sbjct: 768 GEAMKLINEMPMEPTPVVWVALL 790
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 212/478 (44%), Gaps = 85/478 (17%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPE--- 58
I SG +V N ++ MY K ++ +A K+F M ++V+SW+A+++G+SQ G E
Sbjct: 391 IRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHAL 450
Query: 59 --------------------------------VALNYFRLMVCCVLEPNYYTYVGAVSAC 86
AL+ FR M C PN T V +SAC
Sbjct: 451 SLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSAC 510
Query: 87 ASRGDARSGKEIHGRMYRSGLELNS--------HVSNCLINMYGKCGLLSSAQFVFD--A 136
S G GKE H + L L+ V N LI+MY KC A+ +FD +
Sbjct: 511 VSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVS 570
Query: 137 SLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLK 194
+R+ ++W ++ Y Q G+ + L++F + + ++F+ + L ACA L L+
Sbjct: 571 PKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALR 630
Query: 195 VGMQIHSLVFKCAL-EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
G Q+H+ V + FVA LI++Y+K +D A VF N+ + +W++L+ GY
Sbjct: 631 FGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGY 690
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
G+ +A+ +F +M L+P +TF VL A + HS ++ G + F
Sbjct: 691 GMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACS-----------HSGMVDHGINFFN 739
Query: 314 FVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHY 360
++ ++D + + L E++K +EM E V W AL L++C
Sbjct: 740 RMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVAL----LSACRL 795
Query: 361 GEAIEL---LKDMLFEGHCPNLYTYSNILNISS------DIPAIEWGKQTHCCIVKPG 409
+EL + L E N +Y+ + NI + D+ I + + +PG
Sbjct: 796 HSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPG 853
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 194/628 (30%), Positives = 332/628 (52%), Gaps = 4/628 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISG-FSQIGMPEV 59
++ G +++ L+ +Y F + A+ +FD + ++ SW +I F E+
Sbjct: 62 LVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDSYSEI 121
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
Y + C+ E + + + AC+ + G+++H ++ + G +S V L++
Sbjct: 122 VQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVD 180
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KC + ++ VFD L+RN + W S++ Y Q GL +F R+ V ++++
Sbjct: 181 MYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYT 240
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S++ AC LG L G +H V K + + F+ L++LY KC + A VF +
Sbjct: 241 LGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELS 300
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
DL +W+A+I GYAQ G EA+ LF L+P+ VT S VL A A GR
Sbjct: 301 TIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRS 360
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H L IK+G TF N ++D Y+KC ++ ++ F+ + + DV++WN++I+G+ + +
Sbjct: 361 VHCLGIKLGSEDATF-ENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGY 419
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS-NVVIGS 418
EA+EL M + P+ T ++L+ + + A G H +K G S +V +G+
Sbjct: 420 AYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGT 479
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL++ YAKCG AR +FD + KN ++W+ M+ GY G +LE++ M + K++P
Sbjct: 480 ALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEP 539
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N+ F +LSAC H G++ EGW YFN+M + + P M H A +V L A G+ A +F
Sbjct: 540 NEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDF 599
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I+ PI+P+ + L GC+ H LG A ++L P+ ++++SN+YA W
Sbjct: 600 IEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRW 659
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQN 626
+ +V ++MK++ L K G S +++
Sbjct: 660 SQANQVMELMKQRGLAKLPGWSLVDIET 687
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 232/475 (48%), Gaps = 12/475 (2%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
S ++IH + GL + L+++YG G + A+ +FD + SW ++ Y
Sbjct: 54 SLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYF 113
Query: 154 QCGEHVHGLKIFLLS-RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
+ ++ + RK + VL AC+ L G ++H + K D
Sbjct: 114 LNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG-SPDS 172
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
FV GL+++YAKC +++ + RVF I ++ W+++I GY Q E + LF +M
Sbjct: 173 FVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRM-RE 231
Query: 273 GLMPSEVTFSYVLGAFADVKETIG----GRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
GL+ Y LG+ +G G+ +H +IK GF +F+ +LD Y KC
Sbjct: 232 GLVEGN---QYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGD 288
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+ ++ FDE+ D+VSW A+I G+ + EA++L D ++ PN T S++L+
Sbjct: 289 IRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSA 348
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ ++ G+ HC +K G + +ALVDMYAKC + DAR VF+ + K++++W
Sbjct: 349 CAQTGSLNMGRSVHCLGIKLG-SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAW 407
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
N+++ GY Q+G EALE++ M+ + + P+ T + VLSAC +G G I+
Sbjct: 408 NSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIK 467
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+S + ++++ +A G A I E N + W ++ G D
Sbjct: 468 AGLLSGSVYVGTALLNFYAKCGDAESA-RVIFDEMGEKNTITWSAMIGGYGIQGD 521
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 180/330 (54%), Gaps = 11/330 (3%)
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+IS C S+LG C + +L+ +IH+L+ L D L++LY ++ A
Sbjct: 36 SISSNPCFSLLGICKTVSSLR---KIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARL 92
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE-VTFSYVLGAFADVK 292
+F I+ PDL +W +I Y E + + L + V FS VL A ++++
Sbjct: 93 MFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELR 152
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
ET GR+LH I+K+G S +FV ++D Y+KC +E+S + FDE+ + +VV W ++I
Sbjct: 153 ETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIV 211
Query: 353 GHLASCHYGEAIELLKDM---LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
G++ + E + L M L EG N YT +++ + + A+ GK H ++K G
Sbjct: 212 GYVQNDCLKEGLVLFNRMREGLVEG---NQYTLGSLVTACTKLGALHQGKWVHGYVIKSG 268
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
FD N + + L+D+Y KCG + DA VFD LS+ +LVSW M+VGYAQ G REAL++++
Sbjct: 269 FDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFT 328
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ + PN T VLSAC G + G
Sbjct: 329 DERWKDLLPNTVTTSSVLSACAQTGSLNMG 358
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 192/657 (29%), Positives = 354/657 (53%), Gaps = 4/657 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N + + ++ YVK + A+++FD+ ER V++W+ +I +S+ A F M
Sbjct: 73 NSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMH 132
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+P+Y TY+ ++ C A+ + H ++ + G LN V N L++ Y K G L
Sbjct: 133 RSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLD 192
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
SA+ +F +S+S+ +++ Y G + +++F+ + G S+F+ A+V+ A
Sbjct: 193 SARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASV 252
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L + G QIH V K + + FV ++ Y+K + ++ ++F+ + D +++
Sbjct: 253 GLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNV 312
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS-LIIKM 307
+I YA +GK E+IDLF ++ + F +L A + GRQLH+ +++ M
Sbjct: 313 IITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSM 372
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
F V+N+++D Y+KC EE+ + F + V W A+I+ ++ + ++L
Sbjct: 373 ADPDFR-VSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLF 431
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+M + T++ +L S+++ +I GKQ H C+++ GF NV G AL+DMYA C
Sbjct: 432 YEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANC 490
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
+ DA K F+ +S +N+V+WN +L YAQ+G G+ L+ + M + +P+ +F+ +L
Sbjct: 491 ASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCIL 550
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
+AC H LVEEG YFN M + ++P+ +H ++V G+ A + + P EP+
Sbjct: 551 TACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPD 610
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP-EDTSAHIMLSNVYAEANMWDETAKVRK 606
++VW +L+ C+ HK+ L R AA ++ + D + ++ +SN++AEA WD KV+K
Sbjct: 611 EIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKK 670
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
M+++ ++K SW E+++K+H FS + Q +++ + L+ + GY PD
Sbjct: 671 AMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPD 727
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 238/480 (49%), Gaps = 28/480 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G H N N LL Y K ++ A++LF EM + +S++ +I+G++ G+ E A
Sbjct: 166 IVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEA 225
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M +P+ +T+ +SA D G++IHG + ++ N V N ++
Sbjct: 226 IELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDF 285
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K ++ + +F+ E + +S+ ++++Y G+ + +F + + F
Sbjct: 286 YSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPF 345
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++L A +L++G Q+H+ V + D V+ L+++YAKC K + A R+F +
Sbjct: 346 PTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSS 405
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
W+A+I Q G + LF +M + + + TF+ VL A A++ + G+QL
Sbjct: 406 RSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQL 465
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS +I+ GF + + +LD Y+ C +++++KTF+EM E +VV+WNAL++ + +
Sbjct: 466 HSCVIRSGFMN-VYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDG 524
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS-NVVIG-- 417
++ ++M+ G+ P+ ++ IL S HC +V+ G N + G
Sbjct: 525 KGTLKSFEEMIMSGYQPDSVSFLCILTACS-----------HCRLVEEGLKYFNDMSGVY 573
Query: 418 ---------SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVG---YAQHGLGREA 464
+A+VD + GR ++A K+ + + + W ++L + + L R+A
Sbjct: 574 NLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKA 633
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 199/665 (29%), Positives = 351/665 (52%), Gaps = 42/665 (6%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
P VI N + +++ R+ DA++LF MP R+ +++A+++G+S G +A + FR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 66 LMVCCVLEPNYYTY---VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+ P+ Y+Y + A++ +S DAR ++ +S N +I+ +
Sbjct: 94 ----AIPRPDNYSYNTLLHALAVSSSLADARG-------LFDEMPVRDSVTYNVMISSHA 142
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
GL+S A+ FD + E++++SW +L++Y + G +F S S +
Sbjct: 143 NHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDVISWNA 198
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINL------YAKCEKLDLASRVFS 236
++ G + ++ FD+ +++ YA+ + A R+F
Sbjct: 199 LMSGYVQWGKMSEAREL----------FDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD 248
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ D+ W+A++ GYAQ G EA +F M + V+++ ++ A+ +
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDE 304
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
++L +++ +S+ NT+L Y++ +LEE+ FD M + D VSW A++A +
Sbjct: 305 AKELFNMMPCRNVASW----NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQ 360
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
E ++L +M G N ++ +L+ +DI A+E G Q H +++ G+ +
Sbjct: 361 GGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFV 420
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
G+AL+ MY KCG + DAR F+ + +++VSWNTM+ GYA+HG G+EALEI+ MM+
Sbjct: 421 GNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTST 480
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+D T +GVL+AC H GLVE+G YF SM D G++ + +H ++ L G+ A+
Sbjct: 481 KPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAH 540
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+ +K P EP+ +W LL + H++ LGR AAEKI +PE+ +++LSN+YA +
Sbjct: 541 DLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSG 600
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W + K+R +M+E+ +KK G SW E+QNK+H FS + ++ + L + +
Sbjct: 601 KWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMK 660
Query: 657 DGGYV 661
GYV
Sbjct: 661 KAGYV 665
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G+ N LL MY K + DA+ F+EM ER+V+SW+ +I+G+++ G + A
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F +M +P+ T VG ++AC+ G G M+ G+ C+I+
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 120 MYGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
+ G+ G L+ A + D E +S W +LL +
Sbjct: 529 LLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGA 561
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 201/601 (33%), Positives = 319/601 (53%), Gaps = 38/601 (6%)
Query: 97 EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
+IH + GL L +H+ LI+++ + A+FV D + SW SL+ +Y G
Sbjct: 17 QIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSPTDFSWNSLIRAYTVHG 72
Query: 157 EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
+ L ++L +S S F+ VL AC+ LG++ G QIH+ V + D FV
Sbjct: 73 SPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCN 132
Query: 217 GLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF---------- 266
LI++Y KC +LD A + ++ D +W+++I GY Q G+ +A DLF
Sbjct: 133 SLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVV 192
Query: 267 ---------------VKMFS---------SGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
V+M S + P+ T +L A + + GR L
Sbjct: 193 CWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSV 252
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
I T + ++D YSKC +E++ + FD + ++ SWNA+I G + E
Sbjct: 253 FIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEE 312
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
AI+L + M + PN T N+L+ + + A+E G++ H + + G D NV++ +ALVD
Sbjct: 313 AIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVD 372
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MYAKCG+++DA +F S K++ WN M++G A HG GR++L ++S M ++PND T
Sbjct: 373 MYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVT 432
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
FIGVLSAC H GLVEEG F+SM HG+SP+++H A +V L G + AYE +++
Sbjct: 433 FIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNM 492
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
I P+ ++W LLS C+ H++L L +E I+++ + I+LSN+YA + W + A
Sbjct: 493 LIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGFCILLSNIYASSGRWKDVA 552
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+VR+ +KEK +KK +GCSW E+ +H F + +++ L HL GYV
Sbjct: 553 RVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTHLKSGEIYGAYEILVNHLKAEGYVA 612
Query: 663 D 663
+
Sbjct: 613 N 613
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 228/503 (45%), Gaps = 40/503 (7%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
HL+ + I+ A+ + D+ P SW++LI ++ G P+ +L + M+ +
Sbjct: 31 THLIPKLIDLHSIDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTK 90
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ +T+ + AC++ G G++IH + R G + V N LI+MY KC L SA+
Sbjct: 91 PSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNF 150
Query: 134 FDASLERNSISWVSLLSSYCQCGE--------------------------------HVHG 161
+D R+ +SW S++S Y Q G+ V
Sbjct: 151 WDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEM 210
Query: 162 LKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI 219
L +F +L V + + +L AC+ L N +VG + + + + + LI
Sbjct: 211 LSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALI 270
Query: 220 NLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEV 279
++Y+KC ++ A R+F + +L +W+A+I G Q G EAIDL+ M + + P+E+
Sbjct: 271 DMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEI 330
Query: 280 TFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
T VL A A + GR++H + + G +A ++D Y+KC ++++ F +
Sbjct: 331 TLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKT 390
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
E DV WNA+I G +++ + M+ G PN T+ +L+ + +E G+
Sbjct: 391 SEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGR 450
Query: 400 -QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQ 457
Q K G + + +VD+ + G L +A + V + L + + W +L
Sbjct: 451 VQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRI 510
Query: 458 HGLGREALEIYSMMQENKIKPND 480
H LE+ + E + D
Sbjct: 511 H----RNLELADKISETIMASQD 529
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 197/383 (51%), Gaps = 13/383 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQIGMPEVALNY 63
GF V ++N ++ YV++ ++ A+ LF+EMP RNV+ W+A+I+G+ + G L+
Sbjct: 155 GFRDEV-SWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSL 213
Query: 64 FRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
FR M+ ++PN T V +SAC++ + G+ + + + + LN+ + LI+MY
Sbjct: 214 FRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMY 273
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A +FD +N SW ++++ Q G + ++ + V +E +
Sbjct: 274 SKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLV 333
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+VL ACA LG L++G ++H + + L+ + +A L+++YAKC K+D A +F
Sbjct: 334 NVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEK 393
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR-QL 300
D+ W+A+I G A G +++ +F +M +G+ P++VTF VL A GR Q
Sbjct: 394 DVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQF 453
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLASCH 359
S+ K G S ++D + L+E+ + M D + W AL L++C
Sbjct: 454 SSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGAL----LSACR 509
Query: 360 YGEAIEL---LKDMLFEGHCPNL 379
+EL + + + PN+
Sbjct: 510 IHRNLELADKISETIMASQDPNI 532
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G NVI L+ MY K +I+DA +F + E++V W+A+I G + G +L
Sbjct: 358 NGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAV 417
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY-RSGLELNSHVSNCLINMYG 122
F MV ++PN T++G +SAC G G+ M + GL C++++ G
Sbjct: 418 FSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLG 477
Query: 123 KCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ G L A + V + + +SI W +LLS+
Sbjct: 478 RAGHLKEAYELVQNMLIPPDSIIWGALLSA 507
>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
Length = 1007
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/603 (32%), Positives = 326/603 (54%), Gaps = 10/603 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF T N Y+K ++ A +FD M R+ +SW+ +I G G +
Sbjct: 75 LLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDXG 134
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +FR EPN T V A+ AC S G G ++HG + RSG V N L++M
Sbjct: 135 LWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSM 194
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
Y + A+ +FD ER+ ISW ++ Y Q GE L++FL + + + + +
Sbjct: 195 YADNDM-ERAEELFDEMCERDVISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIELDGIT 253
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL ACA G++ +G +H +V L++D FV +I++Y+K + + A + F+ +
Sbjct: 254 MVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHESAFKAFNEMP 313
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+++I G + K EA+ LF M +G EVT +L + + +
Sbjct: 314 CRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKF 373
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+HS++I+ G+ FV N+++D YSKC+L+E + K FD + D VSW+A+IAG
Sbjct: 374 IHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGK 433
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNIL---NISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
EAI L ++M PN T ++L ++S+D+ +W H ++ G + V +
Sbjct: 434 PDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWA---HGIXIRRGLAAEVAV 490
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
G+A++DMYAKCG + +RK FD + KN+VSW M+ +GL R+AL + S M+ + +
Sbjct: 491 GTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGL 550
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KPN T + VLSAC H GLVEEG +F +M++DHG+ P ++H + +V + G+ A
Sbjct: 551 KPNXVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLXRAGKLNXAM 610
Query: 537 EFIKSSP--IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
I+ P + +W LLS C++ + LG AA ++L +P+ ++ + + S++YA
Sbjct: 611 NLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAXRVLXLEPQSSAGYFLASSMYAA 670
Query: 595 ANM 597
+ +
Sbjct: 671 SGL 673
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 242/481 (50%), Gaps = 13/481 (2%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
+ AC+S R GK IH + + G + + N + Y K G L SA FVFD+ R+S
Sbjct: 57 LKACSSL-PVRHGKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDS 115
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
+SW ++ + G GL F +R + + + AC LG ++ G+++H
Sbjct: 116 VSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGY 175
Query: 203 VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEA 262
+ + V L+++YA ++ A +F + D+ +WS +IGGY Q G+A A
Sbjct: 176 IIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAXMA 234
Query: 263 IDLFVKMFSSGLMPSE-VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
+ LF++M S+ + + +T VL A A+ + GR +H ++I G FV N+++D
Sbjct: 235 LQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIID 294
Query: 322 FYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYT 381
YSK + E + K F+EM + VSWN++I+G + + + EA+ L M G + T
Sbjct: 295 MYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVT 354
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
N+L K H +++ G++ N + ++L+D Y+KC + A K+FD L
Sbjct: 355 LVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLK 414
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA-CVHIGLVEEGW 500
+K+ VSW+ M+ G+ G EA+ ++ M + + KPN T + +L A V L W
Sbjct: 415 TKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKW 474
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ + R G++ + +++ ++A G+ +R+A++ I E N V W +++
Sbjct: 475 AHGIXIRR--GLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIP----EKNIVSWGAMIAA 528
Query: 558 C 558
C
Sbjct: 529 C 529
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+IL S +P + GK H ++K GFDS G++ D Y K G L+ A VFD + S+
Sbjct: 55 SILKACSSLP-VRHGKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSR 113
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
+ VSWN M+ G+ G L + + +PN +T + + AC +G +EEG
Sbjct: 114 DSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMH 173
Query: 504 NSMIR 508
+IR
Sbjct: 174 GYIIR 178
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 187/576 (32%), Positives = 332/576 (57%), Gaps = 6/576 (1%)
Query: 93 RSGKEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
+ G+E+HG + +GL + + N L+NMY KCG ++ A+ VF +E++S+SW S+++
Sbjct: 50 KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITG 109
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
Q G + ++ + R+ + F+ S L +CA L K+G QIH K ++ +
Sbjct: 110 LDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 169
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC-EAIDLFVKMF 270
V+ L+ LYA+ L+ ++FS++ D +W+++IG A ++ EA+ F+
Sbjct: 170 VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNAL 229
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
+G + +TFS VL A + + G+Q+H L +K + N ++ Y KC ++
Sbjct: 230 RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMD 289
Query: 331 ESLKTFDEMDEH-DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
K F M E D V+WN++I+G++ + +A++L+ ML G + + Y+ +L+
Sbjct: 290 GCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAF 349
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
+ + +E G + H C V+ +S+VV+GSALVDMY+KCGRL+ A + F+ + +N SWN
Sbjct: 350 ASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWN 409
Query: 450 TMLVGYAQHGLGREALEIYSMMQ-ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+M+ GYA+HG G EAL++++ M+ + + P+ TF+GVLSAC H GL+EEG+ +F SM
Sbjct: 410 SMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSD 469
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC--KTHKDLVL 566
+G++PR++H + + L G+ + +FI P++PN ++WR +L C + L
Sbjct: 470 SYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAEL 529
Query: 567 GRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
G+ AAE + +PE+ +++L N+YA W++ K RK MK+ +KK+ G SW +++
Sbjct: 530 GKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKD 589
Query: 627 KMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+H F + +++ + +L+ + D GYVP
Sbjct: 590 GVHMFVAGDKSHPDTDVIYKKLKELNRKMRDAGYVP 625
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 238/474 (50%), Gaps = 11/474 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ MY K I DA+++F M E++ +SW+++I+G Q G A+ ++ M +
Sbjct: 73 NGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEIL 132
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P +T + ++S+CAS A+ G++IHG + G++LN VSN L+ +Y + G L+ + +
Sbjct: 133 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 192
Query: 134 FDASLERNSISWVSLLSSYCQCGEHV-HGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
F + E + +SW S++ + + + FL + ++G ++ + +SVL A + L
Sbjct: 193 FSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSF 252
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-QLPDLTAWSALIG 251
++G QIH L K + + LI Y KC ++D ++FS + + D W+++I
Sbjct: 253 GELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMIS 312
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
GY +A+DL M +G ++ VL AFA V G ++H+ ++ S
Sbjct: 313 GYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLES 372
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V + ++D YSKC L+ +L+ F+ M + SWN++I+G+ EA++L +M
Sbjct: 373 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMK 432
Query: 372 FEGHC-PNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
+G P+ T+ +L+ S +E G K G + S + D+ + G
Sbjct: 433 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGE 492
Query: 430 LNDARKVFDHLSSK-NLVSWNTML-----VGYAQHGLGREALE-IYSMMQENKI 476
L+ D + K N++ W T+L + LG++A E ++ + EN +
Sbjct: 493 LDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAV 546
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 191/399 (47%), Gaps = 36/399 (9%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGF--SQIGMPEVALN 62
G NV N L+ +Y + +N+ +K+F MPE + +SW+++I S+ +PE A+
Sbjct: 165 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPE-AVA 223
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F + + N T+ +SA +S GK+IHG + + + N LI YG
Sbjct: 224 CFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYG 283
Query: 123 KCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + + +F S R+ ++W S++S Y L + ++G + F A
Sbjct: 284 KCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 343
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+VL A A + L+ GM++H+ + LE D V L+++Y+KC +LD A R F+ + +
Sbjct: 344 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 403
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE-VTFSYVLGAFADVKETIGGRQL 300
+ +W+++I GYA+ G+ EA+ LF M G P + VTF VL A +
Sbjct: 404 NSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACS----------- 452
Query: 301 HSLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSW 347
H+ +++ GF F ++++ + D + L++ D+M + +V+ W
Sbjct: 453 HAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIW 512
Query: 348 NALIAGHLASCHY-GEAIELLK---DMLFEGHCPNLYTY 382
++ A C G EL K +MLF+ N Y
Sbjct: 513 RTVLG---ACCRANGRKAELGKKAAEMLFQLEPENAVNY 548
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/648 (30%), Positives = 347/648 (53%), Gaps = 11/648 (1%)
Query: 13 YNHLLLMYVKFSR--INDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC 70
+N LL Y + S + A+++FDE+P R+ +SW+AL++ + G A R M
Sbjct: 28 WNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQ 87
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
L N + A+ + A G ++ +SGL N ++ L+++Y KCG + A
Sbjct: 88 GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
+ VFD ERN++SW +L++ Y + G+ L++FL + G+A E + AS+L AV
Sbjct: 148 RQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLL--TAVE 205
Query: 191 GNLKVGM-QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-QLPDLTAWSA 248
G M Q+H + K V I Y++C L + R+F I + DL +W+A
Sbjct: 206 GPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNA 265
Query: 249 LIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFAD-VKETIGGRQLHSLIIK 306
++G Y G EA+ FV+M SG+ P +F+ ++ + ++ + GR +H L+IK
Sbjct: 266 MLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIK 325
Query: 307 MGFSSFTFVANTVLDFYSKCE---LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
T V N ++ Y++ ++E++ K F+ + D VSWN+++ G+ +A
Sbjct: 326 SALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADA 385
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
++ + M E + Y +S L SS++ ++ GKQ H ++ GF SN + S+L+ M
Sbjct: 386 LKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFM 445
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y+K G ++DARK F+ + V WN M+ GYAQHG +++ M + K + TF
Sbjct: 446 YSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITF 505
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+G++++C H GLV+EG N+M +G+ RM+H A V L+ GQ +A + I S P
Sbjct: 506 VGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMP 565
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
EP+ +VW LL C+ H ++ L A + +P S +++LS++Y+ MW + A
Sbjct: 566 FEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRAT 625
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
V+++MK++ L K G SW E++N++H F+ + + +++E++ L
Sbjct: 626 VQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 247/467 (52%), Gaps = 11/467 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG NV + LL +Y K R+ DA+++FD MPERN +SW+ALI+G+++ G AL
Sbjct: 120 LKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASAL 179
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M L P+ T+ ++A ++HG++ + G L V N I Y
Sbjct: 180 ELFLEMEREGLAPDEATFASLLTAVEGPS-CFLMHQLHGKIVKYGSALGLTVLNAAITAY 238
Query: 122 GKCGLLSSAQFVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
+CG L ++ +FD + R+ ISW ++L +Y G +K F+ + ++SGV +S
Sbjct: 239 SQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYS 298
Query: 180 CASVLGACAVLG-NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK---LDLASRVF 235
S++ +C+ G + G IH LV K ALE V LI +Y + + ++ A + F
Sbjct: 299 FTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCF 358
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+++ L D +W++++ GY+Q G + +A+ F M S + E FS L + +++
Sbjct: 359 NSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQ 418
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+Q+H L+I GF+S FV+++++ YSK +++++ K+F+E D+ V WNA+I G+
Sbjct: 419 LGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGY- 477
Query: 356 ASCHYGEAIELLKDMLFEGHCP-NLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSN 413
A E +++L + + + P + T+ ++ S ++ G + + K G
Sbjct: 478 AQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLR 537
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+ + VD+Y + G+L+ A+K+ D + + + W T+L HG
Sbjct: 538 MEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHG 584
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF N + L+ MY K I+DA+K F+E + + + W+A+I G++Q G E
Sbjct: 427 VIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENV 486
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM-YRSGLELNSHVSNCLIN 119
F M+ ++ T+VG +++C+ G G EI M + G+ L C ++
Sbjct: 487 DILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVD 546
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
+YG+ G L A+ + D+ E +++ W++LL +
Sbjct: 547 LYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGA 579
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 199/671 (29%), Positives = 343/671 (51%), Gaps = 5/671 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPEV 59
+ G + + N L+ MY K ++ A ++F+ + + R+V SW++++SG Q G
Sbjct: 191 VKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLE 250
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL FR M N YT V + CA G G+E+H + + G ELN N L+
Sbjct: 251 ALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQC-NALLV 309
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY K G + SA VF E++ ISW S+LS Y Q + + F + G
Sbjct: 310 MYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHAC 369
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+ A L L G + H+ K L D V L+++Y KC ++ +++VF ++
Sbjct: 370 VVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMG 429
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ D +W+ ++ +AQ + EA+++ +++ G+M + +L +K +Q
Sbjct: 430 IRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQ 489
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H I+ G + N ++D Y +C + SL F +++ D+VSW ++I +
Sbjct: 490 VHCYAIRNGLLDL-ILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGR 548
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
A+ L +M P+ +IL + + ++ GKQ H +++ F + S+
Sbjct: 549 LNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSS 608
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMY+ CG +N A +VF+ K++V W M+ HG G++A++++ M + + P+
Sbjct: 609 LVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPD 668
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+F+ +L AC H LVEEG HY + M+ + + P +H A VV + GQT AYEFI
Sbjct: 669 HVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFI 728
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
K+ P++P VW LL C+ H++ L AA K+L +P++ +I++SNV+AE W+
Sbjct: 729 KTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWN 788
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL-FDG 658
+ R M E+ L+K+ CSW E+ N +H F++ + +H +++++ L +G
Sbjct: 789 NAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREG 848
Query: 659 GYVPDPIYSSH 669
GYV D + H
Sbjct: 849 GYVEDTRFVLH 859
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 156/551 (28%), Positives = 274/551 (49%), Gaps = 9/551 (1%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE-- 73
L+ MY + R++DA++LF+ MP R V SW+AL+ + G A+ + M
Sbjct: 101 LVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGS 160
Query: 74 -PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P+ T + AC + GD R G E+HG + GL+ ++ V+N LI MY KCGLL SA
Sbjct: 161 APDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALR 220
Query: 133 VFD--ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
VF+ R+ SW S++S Q G + L +F + +G ++ ++ +VL CA L
Sbjct: 221 VFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAEL 280
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G L +G ++H+ + KC E + L+ +YAK ++D A RVF I D +W++++
Sbjct: 281 GLLSLGRELHAALLKCGSELN-IQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSML 339
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
Y Q EAID F +M G P + A + GR+ H+ IK
Sbjct: 340 SCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLH 399
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
+ V NT++D Y KC +E S K F+ M D +SW ++A S + EA+E++ ++
Sbjct: 400 TDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILEL 459
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
EG + +IL + +I KQ HC ++ G ++++ + L+D+Y +CG
Sbjct: 460 QKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYGECGEF 518
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ + +F + K++VSW +M+ +G A+ +++ MQ+ I+P+ + +L A
Sbjct: 519 DHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAI 578
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
+ + +G +IR ++S+V +++ G A + + + + V+
Sbjct: 579 AGLSSLTKGKQVHGFLIR-RNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCK-DVVL 636
Query: 551 WRCLLSGCKTH 561
W +++ H
Sbjct: 637 WTAMINATGMH 647
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 166/305 (54%), Gaps = 6/305 (1%)
Query: 211 DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF 270
D F+A L+ +Y +C ++D A R+F+ + + +W+AL+G Y G A EA+ ++ M
Sbjct: 94 DGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMR 153
Query: 271 SS---GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
+S G P T + VL A + G ++H L +K+G T VAN ++ Y+KC
Sbjct: 154 ASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCG 213
Query: 328 LLEESLKTFD--EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
LL+ +L+ F+ + D DV SWN++++G + + EA+ L + M G N YT +
Sbjct: 214 LLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAV 273
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L + +++ + G++ H ++K G + N+ + LV MYAK GR++ A +VF ++ K+
Sbjct: 274 LQVCAELGLLSLGRELHAALLKCGSELNIQCNALLV-MYAKYGRVDSALRVFGQIAEKDY 332
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
+SWN+ML Y Q+ EA++ + M ++ +P+ + + SA H+ + G +
Sbjct: 333 ISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAY 392
Query: 506 MIRDH 510
I+
Sbjct: 393 AIKQR 397
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF---DSNV 414
C G+ + L+ + P Y +L++ + A G+Q H V G D +
Sbjct: 37 CKEGDLRQALRQLTTRAP-PAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDG 95
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ + LV MY +CGR++DAR++F+ + ++ + SWN ++ Y G EA+ +Y M+ +
Sbjct: 96 FLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRAS 155
Query: 475 KIK---PNDNTFIGVLSAC 490
P+ T VL AC
Sbjct: 156 AAPGSAPDGCTLASVLKAC 174
>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 203/592 (34%), Positives = 332/592 (56%), Gaps = 10/592 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG N+ + L + + + A+K+F++M RN +S + L+ G + E A+
Sbjct: 180 SGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEV 239
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRG----DARSGKEIHGRMYRSGL-ELNSHVSNCLI 118
F+ V + N +YV +SACA R G+E+HG R+GL + V N LI
Sbjct: 240 FKETRHLV-DINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLI 298
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
NMY KCG + A+ VF ++++S+SW S+++ Q +K + RK+G+ S F
Sbjct: 299 NMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNF 358
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S L +CA LG + +G Q H K L+ D V+ L+ LYA+ L +VFS +
Sbjct: 359 TLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWM 418
Query: 239 QLPDLTAWSALIGGYAQLGKAC-EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
D +W+ +IG A G + EAI++F++M +G P+ VTF +L + + +
Sbjct: 419 LERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLS 478
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLA 356
Q+H+LI+K + N +L Y K +E + F M E D VSWN++I+G++
Sbjct: 479 HQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIH 538
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ +A++L+ M+ G + +T++ +L+ + + +E G + H C ++ +S+VVI
Sbjct: 539 NDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVVI 598
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
GSALVDMY+KCGR++ A + F+ + +NL SWN+M+ GYA+HG G AL +++ M+ +
Sbjct: 599 GSALVDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQ 658
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P+ TF+GVLSAC HIGLV+EG+ YF SM +G+ PR++H + +V L G+ +
Sbjct: 659 LPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKID 718
Query: 537 EFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPEDTSAHI 586
FI PI+PN ++WR +L C + LGR AAE + + DP++ +I
Sbjct: 719 NFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVMNI 770
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 169/565 (29%), Positives = 273/565 (48%), Gaps = 23/565 (4%)
Query: 14 NHLLLMYVKF-SRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC-- 70
N L+ MY K+ I+ A+ +FDE+ RN I W++++S +SQ G F M
Sbjct: 82 NVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVYSQRGDAASCFELFSSMQMADS 141
Query: 71 --VLEPNYYTYVGAVSACASRGDARSG--KEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
L+PN YT+ ++A S D+ +I R+ +SGL N +V + L + + G
Sbjct: 142 GLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKSGLLANLYVGSALAGGFSRLGS 201
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYC--QCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
A+ +F+ RN++S L+ +CGE +++F +R V I+ S +L
Sbjct: 202 FDYARKIFEQMTARNAVSMNGLMVGLVRQKCGE--EAVEVFKETRHL-VDINVDSYVILL 258
Query: 185 GACAVLGNL----KVGMQIHSLVFKCALEFDKF-VAMGLINLYAKCEKLDLASRVFSNIQ 239
ACA L + G ++H + L K V GLIN+YAKC +D A VF +
Sbjct: 259 SACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMV 318
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D +W+++I G Q +A+ + M +GLMPS T L + A + + G+Q
Sbjct: 319 DKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLISALSSCASLGCILLGQQ 378
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA--S 357
H IK+G V+NT+L Y++ L E K F M E D VSWN +I G LA
Sbjct: 379 THGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVSWNTVI-GALADSG 437
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EAIE+ +M+ G PN T+ N+L S + + Q H I+K + I
Sbjct: 438 ASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIE 497
Query: 418 SALVDMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+AL+ Y K G + + ++F +S ++ VSWN+M+ GY + L +A+++ +M +
Sbjct: 498 NALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQRGQ 557
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
+ + TF VLSAC + +E G IR + + +++V +++ G+ A
Sbjct: 558 RLDCFTFATVLSACATVATLERGMEVHACAIR-ACLESDVVIGSALVDMYSKCGRIDYAS 616
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTH 561
F P+ N W ++SG H
Sbjct: 617 RFFNLMPMR-NLYSWNSMISGYARH 640
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 149/547 (27%), Positives = 267/547 (48%), Gaps = 22/547 (4%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASR--GDAR 93
MP+RN ++W+ LISG++Q GMP+ A + M+ PN + + A+ AC +
Sbjct: 1 MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQ 60
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGK-CGLLSSAQFVFDASLERNSISWVSLLSSY 152
G +IHG + +S ++ + N LI+MYGK G + A+ VFD RNSI W S++S Y
Sbjct: 61 LGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVY 120
Query: 153 CQCGEHVHGLKIF--LLSRKSGVAI--SEFSCASVLGAC--AVLGNLKVGMQIHSLVFKC 206
Q G+ ++F + SG+++ +E++ S++ A +V L + QI + + K
Sbjct: 121 SQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKS 180
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
L + +V L +++ D A ++F + + + + L+ G + EA+++F
Sbjct: 181 GLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVF 240
Query: 267 --VKMFSSGLMPSEVTFSYVLGAFADVKE-TIGGRQLHSLIIKMGFSSFTF-VANTVLDF 322
+ + S V FA + E GR++H I+ G + V N +++
Sbjct: 241 KETRHLVDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINM 300
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
Y+KC ++ + F M + D VSWN++I G + + +A++ M G P+ +T
Sbjct: 301 YAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTL 360
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+ L+ + + I G+QTH +K G D +V + + L+ +YA+ G L + +KVF +
Sbjct: 361 ISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLE 420
Query: 443 KNLVSWNTMLVGYAQHGLG-REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
++ VSWNT++ A G EA+E++ M PN TFI +L+ + + H
Sbjct: 421 RDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLS-H 479
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQT---RRAYEFIKSSPIEPNKVVWRCLLSGC 558
+++I + + D A L AC G++ E ++V W ++SG
Sbjct: 480 QIHALILKYNVK---DDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISG- 535
Query: 559 KTHKDLV 565
H DL+
Sbjct: 536 YIHNDLL 542
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 153/288 (53%), Gaps = 2/288 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP-EVA 60
I G +V N LL +Y + + + QK+F M ER+ +SW+ +I + G A
Sbjct: 384 IKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEA 443
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M+ PN T++ ++ +S ++ +IH + + ++ ++ + N L+
Sbjct: 444 IEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLAC 503
Query: 121 YGKCGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
YGK G + + + +F S R+ +SW S++S Y + + L + G + F+
Sbjct: 504 YGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQRGQRLDCFT 563
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
A+VL ACA + L+ GM++H+ + LE D + L+++Y+KC ++D ASR F+ +
Sbjct: 564 FATVLSACATVATLERGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMP 623
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ +L +W+++I GYA+ G A+ LF +M SG +P +TF VL A
Sbjct: 624 MRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPDHITFVGVLSA 671
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 201/648 (31%), Positives = 327/648 (50%), Gaps = 43/648 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G N+ N LL MY K + DA +LFD M N +S++A++ G Q G + AL
Sbjct: 167 VKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDAL 226
Query: 62 NYFRLMV--CCVLEPNYYTYV--GAVSACASRGDA----RSGKEIHGRMYRSGLELNSHV 113
F M ++P + V ACAS D R G+ IH + R G + HV
Sbjct: 227 RLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHV 286
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
N LI+MY KC + A VFD+ +++SW L++ + Q G + L++ L +SG
Sbjct: 287 GNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGS 346
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+E + +++L +C K + A
Sbjct: 347 EPNEVTYSNMLASCI-----------------------------------KARDVLSARA 371
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+F I P +T W+ L+ GY Q + ++LF +M + P T + +L + + +
Sbjct: 372 MFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGI 431
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G Q+HS ++ + FVA+ ++D YSKC + + F+ M E DVV WN++I+G
Sbjct: 432 LDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISG 491
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
EA + K M G P +Y++++N + + ++ G+Q H IVK G+D N
Sbjct: 492 LAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQN 551
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V +GSAL+DMYAKCG ++DAR FD + +KN+V+WN M+ GYAQ+G G +A++++ M
Sbjct: 552 VYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLT 611
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+ +P+ TFI VL+ C H GLV+E +FNSM +GI+P +H ++ G+
Sbjct: 612 TEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLV 671
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
I + P + + +VW LL+ C H + LG AA+ + DP++ S +++LSN+YA
Sbjct: 672 EVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSNIYA 731
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQG 641
+ + VR +M + + K G SW + ++ +H F + Q G
Sbjct: 732 SLGRHGDASGVRALMSSRGVVKGRGYSWIDHKDGVHAFMVADDLQTDG 779
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/559 (26%), Positives = 274/559 (49%), Gaps = 45/559 (8%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
PN +YN L + ++ A+ L DEMP+RNV+SW+ +I+ ++ AL +
Sbjct: 71 RPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEG 130
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ L P ++T +SAC + G+ HG + GL+ N V N L+ MY KCG
Sbjct: 131 MLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGG 190
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ A +FD N +S+ +++ Q G L++F +SGV + + +SVLG+
Sbjct: 191 VEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGS 250
Query: 187 CA--------VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
CA V+ ++G IH+L+ + D+ V LI++Y KC ++D A +VF ++
Sbjct: 251 CAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSL 310
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+W+ LI G+ Q G +A+++ M SG P+EVT+S +L + ++ + R
Sbjct: 311 PNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSAR 370
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+ FD++ V +WN L++G+
Sbjct: 371 AM-----------------------------------FDKISRPSVTTWNTLLSGYCQEE 395
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ + +EL + M + P+ T + IL+ S + ++ G Q H V+ +++ + S
Sbjct: 396 LHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVAS 455
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
LVDMY+KCG++ AR +F+ ++ +++V WN+M+ G A H L EA + + M+ N + P
Sbjct: 456 GLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMP 515
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
++++ ++++C + V +G +++D G + ++++ ++A G A F
Sbjct: 516 TESSYASMINSCARLSSVPQGRQIHAQIVKD-GYDQNVYVGSALIDMYAKCGNMDDARVF 574
Query: 539 IKSSPIEPNKVVWRCLLSG 557
+ N V W ++ G
Sbjct: 575 FDCM-VTKNIVAWNEMIHG 592
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 231/472 (48%), Gaps = 51/472 (10%)
Query: 101 RMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH 160
R +RS N++ N ++ + G L +A+ + D +RN +SW +++++ +
Sbjct: 64 RAFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGE 123
Query: 161 GLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLIN 220
L+++ + G+ + F+ ASVL AC + L G + H L K L+ + FV L+
Sbjct: 124 ALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLG 183
Query: 221 LYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVT 280
+Y KC ++ A R+F + P+ +++A++GG Q G +A+ LF +M SG+ V
Sbjct: 184 MYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVA 243
Query: 281 FSYVLGA--------FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
S VLG+ F V+ G+ +H+LI++ GF S V N+++D Y+KC ++E+
Sbjct: 244 VSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEA 303
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
+K FD + VSWN LI G + Y +A+E+L M G PN TYSN+L
Sbjct: 304 VKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNML------ 357
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND---ARKVFDHLSSKNLVSWN 449
A C + D AR +FD +S ++ +WN
Sbjct: 358 --------------------------------ASCIKARDVLSARAMFDKISRPSVTTWN 385
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
T+L GY Q L ++ +E++ MQ ++P+ T +LS+C +G+++ G ++ +R
Sbjct: 386 TLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVR- 444
Query: 510 HGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ M + +V +++ GQ A I + E + V W ++SG H
Sbjct: 445 FLLHNDMFVASGLVDMYSKCGQIGIA-RIIFNRMTERDVVCWNSMISGLAIH 495
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 221/466 (47%), Gaps = 49/466 (10%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + N L+ MY K ++++A K+FD +P + +SW+ LI+GF Q G A
Sbjct: 275 IVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKA 334
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L LM EPN TY +++C D
Sbjct: 335 LEVLNLMEESGSEPNEVTYSNMLASCIKARD----------------------------- 365
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ SA+ +FD + +W +LLS YCQ H +++F + V +
Sbjct: 366 ------VLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTL 419
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L +C+ LG L +G Q+HS + L D FVA GL+++Y+KC ++ +A +F+ +
Sbjct: 420 AVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTE 479
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+++I G A EA D F +M +G+MP+E +++ ++ + A + GRQ+
Sbjct: 480 RDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQI 539
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ I+K G+ +V + ++D Y+KC ++++ FD M ++V+WN +I G+ +
Sbjct: 540 HAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFG 599
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILN-------ISSDIPAIEWGKQTHCCIVKPGFDSN 413
+A++L + ML P+ T+ +L + I + T+ G
Sbjct: 600 EKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTY------GITPL 653
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH 458
+ L+D + GRL + + D++ K + + W +L A H
Sbjct: 654 AEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVH 699
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 7/392 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M SG PN +TY+++L +K + A+ +FD++ +V +W+ L+SG+ Q + +
Sbjct: 341 MEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDT 400
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ FR M ++P+ T +S+C+ G G ++H R L + V++ L++M
Sbjct: 401 VELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDM 460
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A+ +F+ ER+ + W S++S + F R +G+ +E S
Sbjct: 461 YSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSY 520
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS++ +CA L ++ G QIH+ + K + + +V LI++YAKC +D A F +
Sbjct: 521 ASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVT 580
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD---VKETIGG 297
++ AW+ +I GYAQ G +A+DLF M ++ P VTF VL + V E I
Sbjct: 581 KNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIA- 639
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLA 356
+S+ G + ++D + L E D M + D + W L+A A
Sbjct: 640 -FFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAA-CA 697
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
H E E LF N Y + NI
Sbjct: 698 VHHNAELGECAAKHLFRLDPKNPSPYVLLSNI 729
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 164/341 (48%), Gaps = 44/341 (12%)
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
N L + L+ + DEM + +VVSWN +IA S GEA+EL + ML EG
Sbjct: 78 NAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLV 137
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P +T +++L+ + A++ G++ H VK G D N+ + +AL+ MY KCG + DA ++
Sbjct: 138 PTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRL 197
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA------- 489
FD ++S N VS+ M+ G Q G +AL +++ M + ++ + VL +
Sbjct: 198 FDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACAS 257
Query: 490 ------------CVHIGLVEEGW----HYFNSMIRDHGISPRMDHIASV----------- 522
C+H +V +G+ H NS+I + +MD V
Sbjct: 258 EFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVS 317
Query: 523 ----VHLFACRGQTRRAYE---FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL 575
+ F G +A E ++ S EPN+V + +L+ C +D++ R +KI
Sbjct: 318 WNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKI- 376
Query: 576 STDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
+ P T+ + +LS Y + + +T ++ + M+ ++++ D
Sbjct: 377 -SRPSVTTWNTLLSG-YCQEELHQDTVELFRRMQHQNVQPD 415
>gi|242093006|ref|XP_002436993.1| hypothetical protein SORBIDRAFT_10g014210 [Sorghum bicolor]
gi|241915216|gb|EER88360.1| hypothetical protein SORBIDRAFT_10g014210 [Sorghum bicolor]
Length = 698
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 197/622 (31%), Positives = 338/622 (54%), Gaps = 13/622 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N+LL Y+ S A++LFDEM RN++SWS +ISG ++ G+ A F M+ +
Sbjct: 65 NNLLHAYLSRSVPAHARRLFDEMSRRNLVSWSVVISGSARHGVLAEAFALFSHMLHGAGQ 124
Query: 74 -----PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
P+ + V+ C+ +G ++H + + G++ + V+ L++MY KCG +
Sbjct: 125 GSWDRPDSFMLGALVAGCSRARHVDAGVQVHACVAKFGVDEDESVAAALVDMYAKCGWVD 184
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGE---HVHGLKIF--LLSRKSGVAISEFSCASV 183
S+ F + +R+ +SW S+++ G H + +F +L+ K FSC +
Sbjct: 185 SSWRAFTLAPQRSVLSWTSMIACLVNQGSSGYHDAAMLLFKKMLALKVWPTNVTFSC--I 242
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L L VGMQIH + K E D + L+ +Y +C +D +R+ I+ D+
Sbjct: 243 LKVFNTPDLLSVGMQIHGCLLKIGTEVDTALGSALMTMYGRCGGVDEIARLACRIR-HDV 301
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+ ++L+G YA+ G EAI +F +M + + + + +L + V + R++H
Sbjct: 302 FSRTSLLGAYARNGYNAEAIGVFKEMILTNMAIDQSAMTCLLQVCSSVGQLRMVREVHCY 361
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+K F T + N ++ Y +C + F+ M+E D++SW AL+ + + E
Sbjct: 362 ALKTFFKLDTLLLNAIITVYGRCGDTTSAETVFNLMEEQDIISWTALLTCYAQNGLDEEV 421
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ ++ML G ++ +++L S + G Q H VK G D + + +ALV +
Sbjct: 422 LLFFREMLRRGLGSPVFCMTSVLRACSRTSNLAIGLQIHSRTVKLGIDDDNSVENALVTL 481
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
YA CG + A K+F+ +S++++V+WN +L ++QHG A++++ +MQE ++ P+D TF
Sbjct: 482 YANCGSVQVALKIFNSMSNRDIVTWNALLTSFSQHGNEVAAIQLFDLMQEEEVCPDDYTF 541
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+G+LS+C +GLV+EG YFN M + + P+M H +V LFA G+ A +FI + P
Sbjct: 542 VGLLSSCSRMGLVKEGCEYFNEMKAKYNLEPKMVHYTCMVDLFARAGRFCDAMDFIDAMP 601
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
EP++++W LL+ CK H +L LGR AA+KIL P D SA+I LS+++A +MWDE
Sbjct: 602 YEPDQILWEALLASCKIHGNLGLGRIAAKKILEITPHDYSAYITLSSIHASVDMWDEKCW 661
Query: 604 VRKIMKEKSLKKDTGCSWTELQ 625
R + + +KDTG SW + Q
Sbjct: 662 NRTVFDTQQARKDTGRSWIDAQ 683
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 217/475 (45%), Gaps = 11/475 (2%)
Query: 99 HGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
HG + G ++ + N L++ Y + + A+ +FD RN +SW ++S + G
Sbjct: 49 HGVAIKLGCIASTFLCNNLLHAYLSRSVPAHARRLFDEMSRRNLVSWSVVISGSARHGVL 108
Query: 159 VHGLKIFL-----LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
+F + S F +++ C+ ++ G+Q+H+ V K ++ D+
Sbjct: 109 AEAFALFSHMLHGAGQGSWDRPDSFMLGALVAGCSRARHVDAGVQVHACVAKFGVDEDES 168
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC---EAIDLFVKMF 270
VA L+++YAKC +D + R F+ + +W+++I G + A+ LF KM
Sbjct: 169 VAAALVDMYAKCGWVDSSWRAFTLAPQRSVLSWTSMIACLVNQGSSGYHDAAMLLFKKML 228
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
+ + P+ VTFS +L F G Q+H ++K+G T + + ++ Y +C ++
Sbjct: 229 ALKVWPTNVTFSCILKVFNTPDLLSVGMQIHGCLLKIGTEVDTALGSALMTMYGRCGGVD 288
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
E + + HDV S +L+ + + + EAI + K+M+ + + +L + S
Sbjct: 289 EIARLACRI-RHDVFSRTSLLGAYARNGYNAEAIGVFKEMILTNMAIDQSAMTCLLQVCS 347
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
+ + ++ HC +K F + ++ +A++ +Y +CG A VF+ + ++++SW
Sbjct: 348 SVGQLRMVREVHCYALKTFFKLDTLLLNAIITVYGRCGDTTSAETVFNLMEEQDIISWTA 407
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
+L YAQ+GL E L + M + VL AC + G + ++
Sbjct: 408 LLTCYAQNGLDEEVLLFFREMLRRGLGSPVFCMTSVLRACSRTSNLAIGLQIHSRTVK-L 466
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
GI ++V L+A G + A + S + V W LL+ H + V
Sbjct: 467 GIDDDNSVENALVTLYANCGSVQVALKIFNSMS-NRDIVTWNALLTSFSQHGNEV 520
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 130/251 (51%), Gaps = 8/251 (3%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F + + N ++ +Y + A+ +F+ M E+++ISW+AL++ ++Q G+ E L +FR
Sbjct: 367 FKLDTLLLNAIITVYGRCGDTTSAETVFNLMEEQDIISWTALLTCYAQNGLDEEVLLFFR 426
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M+ L + + AC+ + G +IH R + G++ ++ V N L+ +Y CG
Sbjct: 427 EMLRRGLGSPVFCMTSVLRACSRTSNLAIGLQIHSRTVKLGIDDDNSVENALVTLYANCG 486
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ A +F++ R+ ++W +LL+S+ Q G V +++F L ++ V +++ +L
Sbjct: 487 SVQVALKIFNSMSNRDIVTWNALLTSFSQHGNEVAAIQLFDLMQEEEVCPDDYTFVGLLS 546
Query: 186 ACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAK----CEKLDLASRVFSNIQL 240
+C+ +G +K G + + + K LE +++L+A+ C+ +D +
Sbjct: 547 SCSRMGLVKEGCEYFNEMKAKYNLEPKMVHYTCMVDLFARAGRFCDAMDFIDAMPYE--- 603
Query: 241 PDLTAWSALIG 251
PD W AL+
Sbjct: 604 PDQILWEALLA 614
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 199/670 (29%), Positives = 354/670 (52%), Gaps = 6/670 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +G+ +V L+ MY K + A+K+F+EM ERNV+SW+A+ISG+ Q G + A
Sbjct: 178 ITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEA 237
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F+ ++ +PN ++ + AC + D G ++H + ++GLE V N LI+M
Sbjct: 238 FVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISM 297
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG L++A+ VFD N +SW ++++ Y + G ++F ++ G F+
Sbjct: 298 YARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFTY 356
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L CA +L G ++HS + + A E D VA LI++YAKC L+ A +VF+ +
Sbjct: 357 ASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPE 416
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W+A I + G EA +F +M ++P VTF +L + ++ GR +
Sbjct: 417 KNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYI 476
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H I + G S VAN ++ Y +C L ++ + F + D+ SWNA+IA ++
Sbjct: 477 HGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGAN 536
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
G A +L EG + YT+ N+L +++ ++ G++ H + K G + ++ I + L
Sbjct: 537 GSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTL 596
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MY+KCG L DA VF ++ K++V WN ML Y G++AL+++ M+ + P+
Sbjct: 597 IKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDS 656
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
T+ VL+AC +G +E G F++ +++ + H A +V + A EFI+
Sbjct: 657 ATYTSVLNACARLGAIEHG-KKFHTQLKEAAMETDTRHYACMVAALGRASLLKEAEEFIE 715
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI-MLSNVYAEANMWD 599
E + ++W LL C+ H ++ L A E +L + + A L N+YA A W+
Sbjct: 716 EISSESDALMWESLLVACRIHHNVGLAETAVEHLLDVKAQSSPAVCEQLMNIYAAAGRWE 775
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ + ++ M+E L C+ E+ ++ H F T+ F+ G++ + + +L + D G
Sbjct: 776 DVSVIKATMREAGLLAPKSCT-IEVNSEFHTFMTNHFSPQIGVE--DKIEELVWKMMDKG 832
Query: 660 YVPDPIYSSH 669
++ DP Y+ +
Sbjct: 833 FLLDPHYAPN 842
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 332/622 (53%), Gaps = 12/622 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M ++ F P++ N L+ MY K I DA +F M +++V+SW+A+ISG++ G + A
Sbjct: 77 MRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEA 136
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F M L+PN +++ +SAC + G++IH + ++G E + +VS LINM
Sbjct: 137 VDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINM 196
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L A+ VF+ ERN +SW +++S Y Q G+ +F +SG ++ S
Sbjct: 197 YCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSF 256
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+LGAC +L+ G+++H+ + + LE + V LI++YA+C L A +VF N++
Sbjct: 257 ASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRS 316
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
P+ +W+A+I GY + G EA LF M G P T++ +L AD + G++L
Sbjct: 317 PNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKEL 375
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS I++ + + VA ++ Y+KC LEE+ K F++M E + VSWNA IA C +
Sbjct: 376 HSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIA---CCCRH 432
Query: 361 G---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
G EA ++ K M + P+ T+ +LN + E G+ H I + G SN ++
Sbjct: 433 GSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVA 492
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL+ MY +CG+L DAR+VF + ++L SWN M+ Y QHG A +++ + K
Sbjct: 493 NALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGK 552
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
+ TFI VL A ++ ++ G + ++ G+ + + +++ +++ G R AY
Sbjct: 553 GDKYTFINVLRAIANLEDLDAG-RKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYS 611
Query: 538 FIKSSPIEPNKVVWRCLLSGCK--THKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
K+ E + V W +L+ H L + ++ +P D++ + + N A
Sbjct: 612 VFKNVQ-EKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNP-DSATYTSVLNACARL 669
Query: 596 NMWDETAKVRKIMKEKSLKKDT 617
+ K +KE +++ DT
Sbjct: 670 GAIEHGKKFHTQLKEAAMETDT 691
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/441 (33%), Positives = 246/441 (55%), Gaps = 2/441 (0%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
++ N Y + C GK++H M + E + +++N LI+MY KCG + A
Sbjct: 47 VQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDAN 106
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VF + +++ +SW +++S Y G + +F ++ G+ ++ S S+L AC
Sbjct: 107 NVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPI 166
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
L+ G QIHS + K E D V+ LIN+Y KC L+LA +VF+ ++ ++ +W+A+I
Sbjct: 167 VLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMIS 226
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
GY Q G + EA LF K+ SG P++V+F+ +LGA + + G +LH+ I + G
Sbjct: 227 GYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQ 286
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V N ++ Y++C L + + FD + + VSWNA+IAG+ EA L +DM
Sbjct: 287 EVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGY-GEGFMEEAFRLFRDMQ 345
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
+G P+ +TY+++L I +D + GK+ H IV+ ++++V + +AL+ MYAKCG L
Sbjct: 346 QKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLE 405
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
+ARKVF+ + KN VSWN + +HG +EA +++ M+ + + P+ TFI +L++C
Sbjct: 406 EARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCT 465
Query: 492 HIGLVEEGWHYFNSMIRDHGI 512
E G Y + I G+
Sbjct: 466 SPEDFERG-RYIHGKIDQWGM 485
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 208/392 (53%), Gaps = 3/392 (0%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
K GV + A L C +L G ++H + E D ++ LI++Y+KC ++
Sbjct: 44 KRGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIE 103
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A+ VF +++ D+ +W+A+I GYA G+ EA+DLF +M GL P++ +F +L A
Sbjct: 104 DANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQ 163
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
G Q+HS I K G+ S V+ +++ Y KC LE + K F+EM E +VVSW A
Sbjct: 164 TPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTA 223
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I+G++ EA L + ++ G PN ++++IL ++ +E G + H I + G
Sbjct: 224 MISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAG 283
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ V++G+AL+ MYA+CG L +AR+VFD+L S N VSWN M+ GY + G EA ++
Sbjct: 284 LEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFR 342
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
MQ+ +P+ T+ +L+ C + G + ++R + +++ ++A
Sbjct: 343 DMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRT-AWEADVTVATALISMYAKC 401
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
G A + P E N V W ++ C H
Sbjct: 402 GSLEEARKVFNQMP-EKNAVSWNAFIACCCRH 432
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 181/558 (32%), Positives = 306/558 (54%), Gaps = 9/558 (1%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
+ A A+ G ++HG + + G ++ + N LI+MY KCG L A VF ERN
Sbjct: 11 LRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNV 70
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRK-SGVAISEFSCASVLGACAVLGNLKVGMQIHS 201
+SW +L+ + + G+ L++ R S VA +EF+ ++ L AC V+G++ G+ IH
Sbjct: 71 VSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHG 130
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACE 261
+ E VA L+ LY+K ++ A RVF +L W+A+I GYA G +
Sbjct: 131 ACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRD 190
Query: 262 AIDLFVKMFSSGL-----MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS--SFTF 314
++ +F +M P E TF+ +L A + G Q+H+ ++ G S S
Sbjct: 191 SLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAI 250
Query: 315 VANTVLDFYSKCE-LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+A +LD Y KC LL +++ F+ +++ + + W +I GH EA+EL
Sbjct: 251 LAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSS 310
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G + + S+++ + +D +E G+Q HC VK +V + ++L+DMY KCG ++A
Sbjct: 311 GVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEA 370
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+ F + ++N+VSW M+ G +HG G+EA+ ++ M+ ++P++ ++ +LSAC H
Sbjct: 371 ARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHS 430
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLVEE YF+++ D + PR +H A +V L G+ A + + + P+ P VW+
Sbjct: 431 GLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQT 490
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LLS C+ HK++ +GR A E +L+ D ++ ++MLSN++AEA W E +VR M+ + L
Sbjct: 491 LLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGL 550
Query: 614 KKDTGCSWTELQNKMHYF 631
+K GCSW E+ + H+F
Sbjct: 551 RKQGGCSWVEVGKEAHFF 568
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 149/484 (30%), Positives = 247/484 (51%), Gaps = 22/484 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + + N+L+ MY K + A ++F MPERNV+SW+AL+ GF + G
Sbjct: 30 LLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDAREC 89
Query: 61 LNYFRLMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L M + PN +T ++ AC GD +G IHG R+G E + V+N L+
Sbjct: 90 LRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVL 149
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGV---A 174
+Y K G + A+ VFD ++ RN ++W +++S Y G L +F + R+
Sbjct: 150 LYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQ 209
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHS--LVFKCALEFDKFVAMGLINLYAKCE-KLDLA 231
EF+ AS+L AC LG + G Q+H+ ++ + + +A L+++Y KC L +A
Sbjct: 210 PDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMA 269
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+VF+ ++ + W+ +I G+AQ G+ EA++LF + +SSG+ S V+G FAD
Sbjct: 270 MQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADF 329
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
GRQ+H +K VAN+++D Y KC L +E+ + F E+ +VVSW A+I
Sbjct: 330 ALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMI 389
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----V 406
G H EAI + ++M EG P+ Y +L+ S +E ++ I +
Sbjct: 390 NGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRL 449
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG---LGR 462
+P + + +VD+ + G L++A+ + + V W T+L H +GR
Sbjct: 450 RPRAEHY----ACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGR 505
Query: 463 EALE 466
EA E
Sbjct: 506 EAGE 509
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 195/393 (49%), Gaps = 17/393 (4%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L A A + G Q+H + K D + LI++YAKC +L +A VF +
Sbjct: 8 ADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPE 67
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+AL+ G+ + G A E + L M S S + P+E T S L A V + G
Sbjct: 68 RNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVW 127
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H ++ GF VAN+++ YSK + ++ + FD ++V+WNA+I+G+ + H
Sbjct: 128 IHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGH 187
Query: 360 YGEAIELLKDMLF-----EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD--S 412
+++ + ++M E H P+ +T++++L + A G Q H +V G S
Sbjct: 188 GRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTAS 247
Query: 413 NVVIGSALVDMYAKCG-RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
N ++ AL+DMY KC L A +VF+ L KN + W T++VG+AQ G +EA+E++
Sbjct: 248 NAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRF 307
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA---SVVHLFAC 528
+ ++ + + V+ LVE+G ++ +P ++ S++ ++
Sbjct: 308 WSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVK----TPAGLDVSVANSLIDMYHK 363
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
G T A + P N V W +++G H
Sbjct: 364 CGLTDEAARRFREVPAR-NVVSWTAMINGLGKH 395
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/652 (30%), Positives = 334/652 (51%), Gaps = 53/652 (8%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MYV + + +++FD++ V W+ L++G+++I
Sbjct: 142 LVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKI--------------------- 180
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
G+ R + RM G+ + SA+ +FD
Sbjct: 181 --------------GNFRESLSLFKRMRELGIRR-----------------VESARKLFD 209
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+R+ ISW S++S Y G GL +F G+ + SV+ C+ G L +
Sbjct: 210 ELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLL 269
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +H K + + + L+++Y+K L+ A +VF + + +W+++I GYA+
Sbjct: 270 GRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAR 329
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G + ++ LF +M G+ P T + +L A A G+ +H+ I + S FV
Sbjct: 330 EGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFV 389
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
+N ++D Y+KC + ++ F EM D+VSWN +I G+ + EA+ L +M +
Sbjct: 390 SNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSK 449
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
PN T + IL + + A+E G++ H I++ GF + + +ALVDMY KCG L AR
Sbjct: 450 -PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARL 508
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+FD + K+LVSW M+ GY HG G EA+ ++ M+ + I+P++ +FI +L AC H GL
Sbjct: 509 LFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGL 568
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
++EGW +FN M + I P+ +H A +V L A G +AY+FIK PIEP+ +W LL
Sbjct: 569 LDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 628
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
GC+ + D+ L AE + +PE+T +++L+N+YAEA W+E K+R+ + + L+K
Sbjct: 629 CGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRK 688
Query: 616 DTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
+ GCSW E++ K+H F T + + ++ + + + G+ P Y+
Sbjct: 689 NPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYA 740
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 208/462 (45%), Gaps = 60/462 (12%)
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
+C+ G +++ S K + + + SVL CA L +++ G +IHS++ +E D
Sbjct: 78 FCELGNLRRAMELINQSPKPDLELRTY--CSVLQLCADLKSIQDGRRIHSIIQSNDVEVD 135
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
+ L+ +Y C L R+F + + W+ L+ GYA++G E++ LF +M
Sbjct: 136 GVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRE 195
Query: 272 SGLMPSE-------------------------------------------------VTFS 282
G+ E T
Sbjct: 196 LGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMV 255
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
V+ ++ + GR LH IK F + N +LD YSK L +++ F+ M E
Sbjct: 256 SVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGER 315
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
VVSW ++IAG+ ++ L +M EG P+++T + IL+ + +E GK H
Sbjct: 316 SVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVH 375
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
I + S++ + +AL+DMYAKCG + DA VF + K++VSWNTM+ GY+++ L
Sbjct: 376 NYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPN 435
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
EAL ++ MQ N KPN T +L AC + +E G ++R+ G S ++
Sbjct: 436 EALNLFVEMQYNS-KPNSITMACILPACASLAALERGQEIHGHILRN-GFSLDRHVANAL 493
Query: 523 VHLF---ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
V ++ G R ++ I E + V W +++G H
Sbjct: 494 VDMYLKCGALGLARLLFDMIP----EKDLVSWTVMIAGYGMH 531
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 204/425 (48%), Gaps = 26/425 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I + F + N LL MY K +N A ++F+ M ER+V+SW+++I+G+++ G+ ++++
Sbjct: 278 IKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSV 337
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + P+ +T + ACA G +GK++H + + ++ + VSN L++MY
Sbjct: 338 RLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMY 397
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A VF ++ +SW +++ Y + L +F + + + + A
Sbjct: 398 AKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLF-VEMQYNSKPNSITMA 456
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L ACA L L+ G +IH + + D+ VA L+++Y KC L LA +F I
Sbjct: 457 CILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEK 516
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
DL +W+ +I GY G EAI F +M +SG+ P EV+F +L A + H
Sbjct: 517 DLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS-----------H 565
Query: 302 SLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSWN 348
S ++ G+ F + N ++D ++ L ++ K M E D W
Sbjct: 566 SGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWG 625
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
AL+ G H + E + + +FE N Y + NI ++ E K+ I +
Sbjct: 626 ALLCG-CRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRR 684
Query: 409 GFDSN 413
G N
Sbjct: 685 GLRKN 689
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 32/249 (12%)
Query: 299 QLH---SLIIKMGFSSFTFVANTVL---DFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
Q+H SL GF F + T L + Y C + S+ + +D + +N I
Sbjct: 18 QIHRENSLTYPNGFIFFRPSSKTPLVSSNLYHSCATIGTSVLPSETID-CKITDYNIEI- 75
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPN----LYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
C + E L + M P L TY ++L + +D+ +I+ G++ H I
Sbjct: 76 -----CRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSN 130
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
+ + V+GS LV MY CG L + R++FD ++++ + WN ++ GYA+ G RE+L ++
Sbjct: 131 DVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLF 190
Query: 469 SMMQENKIKPNDN--------------TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
M+E I+ ++ ++ ++S V GL E+G F M+ GI+
Sbjct: 191 KRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLL-LGINT 249
Query: 515 RMDHIASVV 523
+ + SVV
Sbjct: 250 DLATMVSVV 258
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GF + N L+ MY+K + A+ LFD +PE++++SW+ +I+G+ G A
Sbjct: 478 ILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEA 537
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
+ F M +EP+ +++ + AC+ G G M + +E S C+++
Sbjct: 538 IAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVD 597
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQC 155
+ + G LS A +F+ +E ++ W +LL C C
Sbjct: 598 LLARAGNLSKAYKFIKMMPIEPDATIWGALL---CGC 631
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/657 (29%), Positives = 348/657 (52%), Gaps = 2/657 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SGF N + + L+ Y K +A ++F+ M +++SW+ ++S F + G AL
Sbjct: 145 SGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQL 204
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+ M+ + PN +T+V ++A + G GK +H + +ELN + L++MY K
Sbjct: 205 YHRMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCK 263
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
C + A V +LE + W +++S + Q + + F SGV + F+ + +
Sbjct: 264 CQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGI 323
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL-DLASRVFSNIQLPD 242
L AC+ + L +G QIHS V LE D V L+++Y KC + + A R F I P+
Sbjct: 324 LNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPN 383
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ +W++LI G+++ G E+I +F M G+ P+ T S +LGA +K R+LH
Sbjct: 384 VISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHG 443
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
IIK + V N ++D Y+ +++++ M DV+++ +L + ++
Sbjct: 444 YIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEM 503
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+ ++ M + + ++ ++ L+ ++ IP +E GKQ HC VK G S + + + LVD
Sbjct: 504 ALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVD 563
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
+Y KCG ++DA + F ++ + VSWN ++ G A +G AL + M+ ++P+ T
Sbjct: 564 LYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQIT 623
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
+ VL AC H GLV+ G YF SM HGI P++DH +V L G+ A I++
Sbjct: 624 CLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETM 683
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
P +P+ ++++ LL CK H ++ LG + A + L DP D + +++L+N+Y ++ +
Sbjct: 684 PFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGE 743
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
K R++M+E+ ++K+ G SW E +N +H F+ + Q +HE + L + G
Sbjct: 744 KTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEKIESLIAQFRNQG 800
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 166/592 (28%), Positives = 307/592 (51%), Gaps = 8/592 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF ++ N+LL +Y K + +A++LFDEMP R+V SW+ L+S + +IG E A
Sbjct: 41 IIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEA 100
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ PN +T A+ +C++ + G + +SG + N + + LI+
Sbjct: 101 LELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDF 160
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG A VF+ + +SW ++SS+ + G L+++ ++GVA +EF+
Sbjct: 161 YSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTF 220
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+L A + LG L G +H+ + +E + + L+++Y KC+ ++ A +V
Sbjct: 221 VKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLE 279
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+A+I G+ Q K EAI F +M +SG++P+ T+S +L A + + G+Q+
Sbjct: 280 YDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQI 339
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKC-ELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
HS ++ G + V N+++D Y KC ++E++++ F + +V+SW +LIAG
Sbjct: 340 HSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGL 399
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
E+I++ M G PN +T S IL I ++ ++ H I+K D++VV+G+A
Sbjct: 400 EEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNA 459
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVD YA G ++DA V + ++++++ ++ Q G AL I + M ++ ++ +
Sbjct: 460 LVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMD 519
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE-F 538
+ LSA I ++E G ++ G+ + +V L+ G A+ F
Sbjct: 520 GFSLASFLSAAAGIPIMETGKQLHCYSVKS-GLGSWISVSNGLVDLYGKCGCIHDAHRSF 578
Query: 539 IKSSPIEPNKVVWRCLLSGCKT--HKDLVLGRYAAEKILSTDPEDTSAHIML 588
++ + EP+ V W L+ G + H L + ++ +P+ + ++L
Sbjct: 579 LEIT--EPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVL 628
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 227/409 (55%), Gaps = 3/409 (0%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
VS C SR R G IH + + G + + +SN L+++YGKC ++ A+ +FD R+
Sbjct: 23 VSFCNSR-SVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDV 81
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
SW L+S+Y + G H L++F SG +EF+ ++ L +C+ L G + +L
Sbjct: 82 ASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQAL 141
Query: 203 VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEA 262
V K + + + LI+ Y+KC A RVF + D+ +W+ ++ + + G +A
Sbjct: 142 VTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQA 201
Query: 263 IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
+ L+ +M +G+ P+E TF +L A + + G+ +H+ ++ + ++D
Sbjct: 202 LQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNY-GKLVHAHLMMWRIELNLVLKTALVDM 260
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
Y KC+ +E+++K E+DV W A+I+G S + EAI +M G PN +TY
Sbjct: 261 YCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTY 320
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL-NDARKVFDHLS 441
S ILN S I A++ GKQ H +V G +++V +G++LVDMY KC + DA + F ++
Sbjct: 321 SGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIA 380
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
S N++SW +++ G+++HGL E+++++ MQ ++PN T +L AC
Sbjct: 381 SPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGAC 429
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 225/457 (49%), Gaps = 36/457 (7%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+++ G+ IHS + K + D F++ L++LY KC + A ++F + D+ +W+ L+
Sbjct: 30 SVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMS 89
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
Y ++G EA++LF M SG P+E T S L + + ++E G + +L+ K GF S
Sbjct: 90 AYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDS 149
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
+ + ++DFYSKC +E+ + F+ M+ D+VSW +++ + + + +A++L M+
Sbjct: 150 NPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMI 209
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
G PN +T+ +L SS + + +GK H ++ + N+V+ +ALVDMY KC +
Sbjct: 210 QTGVAPNEFTFVKLLAASSFL-GLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIE 268
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC- 490
DA KV ++ W ++ G+ Q REA+ + M+ + + PN+ T+ G+L+AC
Sbjct: 269 DAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACS 328
Query: 491 ----------VHIGLVEEG--------------WHYFNSMIRD-----HGI-SPRMDHIA 520
+H +V G + ++MI D GI SP +
Sbjct: 329 SILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWT 388
Query: 521 SVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILST 577
S++ F+ G ++ + + ++ + PN +L C T K L R I+
Sbjct: 389 SLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKN 448
Query: 578 DPE-DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
+ + D L + YA M D+ V +MK + +
Sbjct: 449 NADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDV 485
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 130/223 (58%), Gaps = 2/223 (0%)
Query: 275 MPSEVTFSYV--LGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
+PS++ +S + + +F + + G +HS IIKMGF F++N +L Y KC + E+
Sbjct: 10 IPSKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEA 69
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
+ FDEM DV SW L++ + ++ EA+EL ML G PN +T S L S +
Sbjct: 70 RQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSAL 129
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
G + + K GFDSN V+GSAL+D Y+KCG +A +VF+++++ ++VSW M+
Sbjct: 130 REFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMV 189
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+ + G +AL++Y M + + PN+ TF+ +L+A +GL
Sbjct: 190 SSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGL 232
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG + N L+ +Y K I+DA + F E+ E + +SW+ LI G + G AL
Sbjct: 547 VKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSAL 606
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY-RSGL--ELNSHVSNCLI 118
+ F M +EP+ T + + AC+ G G + M + G+ +L+ +V CL+
Sbjct: 607 SAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYV--CLV 664
Query: 119 NMYGKCGLLSSAQFVFDA 136
++ G+ G L A V +
Sbjct: 665 DLLGRAGRLEEAMNVIET 682
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 193/629 (30%), Positives = 342/629 (54%), Gaps = 6/629 (0%)
Query: 26 INDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSA 85
+ DA +LFDEM + + W+ +I GF+ G+ AL + MV ++ + +TY + +
Sbjct: 76 MEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKS 135
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
GK+IH + + + +V N LI++Y K G A+ VF+ ER+ +SW
Sbjct: 136 VTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSW 195
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
S++S Y + L +F K G FS S LGAC+ + + +G ++H +
Sbjct: 196 NSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVR 255
Query: 206 CALEF-DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
+E D V ++++Y+K ++ A R+F I ++ AW+ LIG YA+ + +A
Sbjct: 256 SRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFL 315
Query: 265 LFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
F KM +GL P +T +L A A + GR +H ++ GF + ++D Y
Sbjct: 316 CFQKMSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMRRGFLPHIVLDTALIDMY 371
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+ L+ + FD + E +++SWN++IA ++ + A+EL + + P+ T +
Sbjct: 372 GEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIA 431
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+IL ++ ++ G+Q H IVK + SN +I ++LV MYA CG L DARK F+H+ K
Sbjct: 432 SILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLK 491
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
++VSWN++++ YA HG GR ++ ++S M +K+ PN +TF +L+AC G+V+EGW YF
Sbjct: 492 DVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYF 551
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
SM R++GI P ++H ++ L G A FI+ P P +W LL+ + H D
Sbjct: 552 ESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHND 611
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
+ + +AAE+I + ++T +++L N+YAEA W++ +++ +M+ K + + + S E
Sbjct: 612 ITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTVE 671
Query: 624 LQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
++K H + + + ++EV++ +S
Sbjct: 672 AKSKTHVLTNGDRSHVETNKIYEVLDIVS 700
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 224/433 (51%), Gaps = 7/433 (1%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F +V N L+ +Y+K DA+K+F+EMPER+++SW+++ISG+ + +L F+
Sbjct: 157 FVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFK 216
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL-NSHVSNCLINMYGKC 124
M+ +P+ ++ + A+ AC+ GKE+H RS +E + V +++MY K
Sbjct: 217 EMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKY 276
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASV 183
G +S A+ +F ++RN ++W L+ Y + F +S ++G+ + ++
Sbjct: 277 GEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINL 336
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L ACA+L G IH + + LI++Y + +L A +F I +L
Sbjct: 337 LPACAILE----GRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNL 392
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+++I Y Q GK A++LF K++ S L+P T + +L A+A+ GRQ+H+
Sbjct: 393 ISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAY 452
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
I+K + S T + N+++ Y+ C LE++ K F+ + DVVSWN++I + +
Sbjct: 453 IVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRIS 512
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVD 422
+ L +M+ PN T++++L S ++ G + + + G D + ++D
Sbjct: 513 VCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLD 572
Query: 423 MYAKCGRLNDARK 435
+ + G + A++
Sbjct: 573 LIGRTGNFSSAKR 585
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 209/435 (48%), Gaps = 7/435 (1%)
Query: 103 YRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGL 162
Y+ +LN + + GL+ A +FD + ++ W ++ + CG + L
Sbjct: 52 YKVTKQLNDPALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEAL 111
Query: 163 KIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
+++ SGV F+ V+ + + +L+ G +IH++V K D +V LI+LY
Sbjct: 112 QLYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLY 171
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
K A +VF + D+ +W+++I GY L ++ LF +M G P +
Sbjct: 172 MKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTM 231
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSF-TFVANTVLDFYSKCELLEESLKTFDEMDE 341
LGA + V G++LH ++ + V ++LD YSK + + + F + +
Sbjct: 232 SALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQ 291
Query: 342 HDVVSWNALIAGHLASCHYGEAIELLKDMLFE-GHCPNLYTYSNILNISSDIPAIEWGKQ 400
++V+WN LI + + +A + M + G P++ T N+L AI G+
Sbjct: 292 RNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPAC----AILEGRT 347
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
H ++ GF ++V+ +AL+DMY + G+L A +FD ++ KNL+SWN+++ Y Q+G
Sbjct: 348 IHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGK 407
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
ALE++ + ++ + P+ T +L A + EG +++ S + +
Sbjct: 408 NYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTII-LN 466
Query: 521 SVVHLFACRGQTRRA 535
S+VH++A G A
Sbjct: 467 SLVHMYAMCGDLEDA 481
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 179/338 (52%), Gaps = 8/338 (2%)
Query: 222 YAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTF 281
+A ++ A ++F + D W+ +I G+ G EA+ L+ +M SG+ T+
Sbjct: 70 FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129
Query: 282 SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
+V+ + + G+++H+++IK+ F S +V N+++ Y K ++ K F+EM E
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE 189
Query: 342 HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
D+VSWN++I+G+LA ++ L K+ML G P+ ++ + L S + + GK+
Sbjct: 190 RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKEL 249
Query: 402 HCCIVKPGFDS-NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
HC V+ ++ +V++ ++++DMY+K G ++ A ++F + +N+V+WN ++ YA++
Sbjct: 250 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSR 309
Query: 461 GREALEIYSMMQE-NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
+A + M E N ++P+ T I +L AC + EG +R G P +
Sbjct: 310 VTDAFLCFQKMSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMR-RGFLPHIVLD 364
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+++ ++ GQ + A E I E N + W +++
Sbjct: 365 TALIDMYGEWGQLKSA-EVIFDRIAEKNLISWNSIIAA 401
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 123/231 (53%), Gaps = 2/231 (0%)
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
L+E++L+ FDEM++ D WN +I G + Y EA++L M+F G + +TY ++
Sbjct: 75 LMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIK 134
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ I ++E GK+ H ++K F S+V + ++L+ +Y K G DA KVF+ + +++VS
Sbjct: 135 SVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVS 194
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
WN+M+ GY G +L ++ M + KP+ + + L AC H+ G +
Sbjct: 195 WNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAV 254
Query: 508 RDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
R + + + S++ +++ G+ A E I I+ N V W L+ GC
Sbjct: 255 RSRIETGDVMVMTSILDMYSKYGEVSYA-ERIFKCIIQRNIVAWNVLI-GC 303
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 106/199 (53%), Gaps = 10/199 (5%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF P+++ L+ MY ++ ++ A+ +FD + E+N+ISW+++I+ + Q G AL F
Sbjct: 356 GFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELF 415
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ + L P+ T + A A G++IH + +S N+ + N L++MY C
Sbjct: 416 QKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMC 475
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHG---LKIFLLSR--KSGVAISEFS 179
G L A+ F+ L ++ +SW S++ +Y VHG + + L S S V ++ +
Sbjct: 476 GDLEDARKCFNHVLLKDVVSWNSIIMAYA-----VHGFGRISVCLFSEMIASKVDPNKST 530
Query: 180 CASVLGACAVLGNLKVGMQ 198
AS+L AC++ G + G +
Sbjct: 531 FASLLAACSISGMVDEGWE 549
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S + N I N L+ MY + DA+K F+ + ++V+SW+++I ++ G ++
Sbjct: 453 IVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRIS 512
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
+ F M+ ++PN T+ ++AC+ G G E M R G++ +++
Sbjct: 513 VCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLD 572
Query: 120 MYGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
+ G+ G SSA+ F+ + + W SLL++
Sbjct: 573 LIGRTGNFSSAKRFIREMPFLPTARIWGSLLNA 605
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 191/636 (30%), Positives = 343/636 (53%), Gaps = 2/636 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + N++L +YVKF+R++ AQK+FD M RN I+W++LI G+ + + A
Sbjct: 93 LVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSA 152
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M N +T + AC+S D G++IH + +SG + N V LI M
Sbjct: 153 FSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAM 212
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G A+ VFD+ ++ ++ Y + G +++F G ++++
Sbjct: 213 YTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTF 272
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+++ C ++ G Q+ L FK + V +I +Y A R+FS++
Sbjct: 273 TNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSE 332
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSS-GLMPSEVTFSYVLGAFADVKETIGGRQ 299
+L +W+ALI GY++ G +A+D F+ + G+ + +L +D G Q
Sbjct: 333 KNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQ 392
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H ++K+G + VA ++D Y+KCE L+ + FD + + S+NA++AG L S
Sbjct: 393 IHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSG 452
Query: 360 YGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
E + L + G P++ T+S +L++ ++ ++E G+ H VK GFD+N+ + +
Sbjct: 453 DEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVAN 512
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+++ MYAKCG + DA ++F+ ++ ++ +SWN ++ YA HG +++L ++ M+ P
Sbjct: 513 SVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDP 572
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
++ T + +L AC + GL ++G FN M +GI P ++H A + L G A +
Sbjct: 573 DEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAMDI 632
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
IK SP + ++WR L++ CK H +L G+ A++ +L P + ++I++SN+YA M
Sbjct: 633 IKRSPFPKSTLLWRTLVNVCKLHGNLNFGKLASKHLLDLSPVEAGSYILVSNMYASEKMS 692
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTS 634
DE AKVRK+M + +K+ G SW E+ NK+H+F S
Sbjct: 693 DEAAKVRKVMNDLKFRKEAGSSWIEIDNKVHHFVAS 728
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 137/471 (29%), Positives = 235/471 (49%), Gaps = 8/471 (1%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
G+ +H + ++G + ++ N ++N+Y K L AQ VFD RN+I+W SL+ Y +
Sbjct: 86 GQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLE 145
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
+ I K G +E +C +L AC+ + +G QIH V K + + FV
Sbjct: 146 DNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFV 205
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
LI +Y K D+A +VF ++ D+ + +I Y + G +AI++F + + G
Sbjct: 206 GTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGF 265
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
P++ TF+ ++ G+QL L K GF S T V N ++ Y + +E+ +
Sbjct: 266 EPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAER 325
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIEL---LKDMLFEGHCPNLYTYSNILNISSD 391
F M E +++SW ALI+G+ S + +A++ L D L L T IL+ SD
Sbjct: 326 MFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTA--ILDCCSD 383
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+E G Q H ++K G +V + +ALVD+YAKC +L AR VFDHLS+K + S+N +
Sbjct: 384 CNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAI 443
Query: 452 LVGYAQ-HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
L G+ + G + + +++ ++ +KP+ TF +LS + +E+G F++
Sbjct: 444 LAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKG-RSFHAYTVKT 502
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
G + SV+ ++A G A++ + + W L+S H
Sbjct: 503 GFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCR-DSISWNALISAYALH 552
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 157/306 (51%), Gaps = 1/306 (0%)
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
+G +HS + K + D F ++NLY K +LDLA +VF ++ + W++LI GY
Sbjct: 85 LGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYL 144
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
+ A + M G +E T + +L A + + I G Q+H +IK GF F
Sbjct: 145 EDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVF 204
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V +++ Y+K + + K FD M D+ N +I + + + G+AIE+ K++L +G
Sbjct: 205 VGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDG 264
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P YT++NI++ + +E GKQ K GF S +G+A++ MY G +A
Sbjct: 265 FEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAE 324
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHI 493
++F +S KNL+SW ++ GY++ G G++A++ + + E I + +L C
Sbjct: 325 RMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDC 384
Query: 494 GLVEEG 499
+E G
Sbjct: 385 NNLELG 390
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 189/653 (28%), Positives = 343/653 (52%), Gaps = 36/653 (5%)
Query: 12 TYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
T+N ++ Y + +A+KLF+E P +N I+WS+L+SG+ + G L F M
Sbjct: 70 TWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDG 129
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+P+ YT + AC++ +GK IH + LE N V+ L++MY KC L A+
Sbjct: 130 QKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAE 189
Query: 132 FVFDASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
++F + +R N + W ++L+ Y Q GE + ++ F R G+ + F+ S+L AC +
Sbjct: 190 YLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSI 249
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G Q+H + + +V L+++YAKC L A + +++ D+ W+++I
Sbjct: 250 SAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMI 309
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
G G EA+ LF KM + + + T+ VL + A K G +HSL IK GF
Sbjct: 310 VGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFD 369
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
+ V+N ++D Y+K L +L F+++ + DV+SW +L+ G++ + + +A++L DM
Sbjct: 370 ACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDM 429
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
+ + + + + +++ IE+G+Q H +K S + ++L+ MYAKCG L
Sbjct: 430 RTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCL 489
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
DA +VFD + ++N++SW ++VGYAQ+
Sbjct: 490 EDAIRVFDSMETRNVISWTAIIVGYAQN-------------------------------- 517
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
GLVE G YF SM + +GI P DH A ++ L G+ A + +EP+ +
Sbjct: 518 ---GLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATI 574
Query: 551 WRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
W+ LLS C+ H +L LG A + ++ +P ++ +++LSN+++ A W++ A +R+ MK
Sbjct: 575 WKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKT 634
Query: 611 KSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ K+ G SW E+++++H F + + +++ ++++ + + + G+VPD
Sbjct: 635 MGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPD 687
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 186/347 (53%), Gaps = 1/347 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEVALNYFRLM 67
N+ L+ MY K + +A+ LF +P+R N + W+A+++G++Q G A+ F+ M
Sbjct: 168 NIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEM 227
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
+E N++T+ ++AC S G+++HG + SG N +V + L++MY KCG L
Sbjct: 228 RNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDL 287
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+SA+ + D + + W S++ G L +F + I +F+ SVL +
Sbjct: 288 ASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSL 347
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A NLK+G +HSL K + K V+ L+++YAK L A VF+ I D+ +W+
Sbjct: 348 ASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWT 407
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+L+ GY G +A+ LF M ++ + + + V A A++ GRQ+H+ IK
Sbjct: 408 SLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKS 467
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
S N+++ Y+KC LE++++ FD M+ +V+SW A+I G+
Sbjct: 468 SAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGY 514
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 182/351 (51%), Gaps = 9/351 (2%)
Query: 211 DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF 270
DK+ +I+ YA L A ++F+ + + WS+L+ GY + G E + F +M+
Sbjct: 67 DKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMW 126
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE-LL 329
S G PS+ T VL A + + G+ +H IK+ + FVA ++D YSKC+ LL
Sbjct: 127 SDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLL 186
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
E F D + V W A++ G+ + +AI+ K+M +G N +T+ +IL
Sbjct: 187 EAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTAC 246
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
+ I A +G+Q H CI+ GF NV + SALVDMYAKCG L AR + D + ++V WN
Sbjct: 247 TSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWN 306
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV---LSACVHIGLVEEGWHYFNSM 506
+M+VG HG EAL ++ M I+ +D T+ V L++C ++ + E +S+
Sbjct: 307 SMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGES----VHSL 362
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G ++V ++A +G A + + + ++ + + W L++G
Sbjct: 363 TIKTGFDACKTVSNALVDMYAKQGNLSCALD-VFNKILDKDVISWTSLVTG 412
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 138/257 (53%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF PNV + L+ MY K + A+ + D M +V+ W+++I G G E A
Sbjct: 262 IIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEA 321
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + + +TY + + AS + + G+ +H ++G + VSN L++M
Sbjct: 322 LVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDM 381
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G LS A VF+ L+++ ISW SL++ Y G H L++F R + V + +F
Sbjct: 382 YAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVV 441
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A V ACA L ++ G Q+H+ K + LI +YAKC L+ A RVF +++
Sbjct: 442 ACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMET 501
Query: 241 PDLTAWSALIGGYAQLG 257
++ +W+A+I GYAQ G
Sbjct: 502 RNVISWTAIIVGYAQNG 518
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 128/278 (46%), Gaps = 34/278 (12%)
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA-----GHLAS------------- 357
+N +L SK ++E+ K FD+M D +WN +I+ G+L
Sbjct: 40 SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNS 99
Query: 358 ----------CHYGEAIELLK---DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCC 404
C G +E L+ M +G P+ YT ++L S + + GK HC
Sbjct: 100 ITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCY 159
Query: 405 IVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHGLGRE 463
+K ++N+ + + LVDMY+KC L +A +F L KN V W ML GYAQ+G +
Sbjct: 160 AIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLK 219
Query: 464 ALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV 523
A++ + M+ ++ N TF +L+AC I G +I G P + +++V
Sbjct: 220 AIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWS-GFGPNVYVQSALV 278
Query: 524 HLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++A G A + + I+ + V W ++ GC TH
Sbjct: 279 DMYAKCGDLASARMILDTMEID-DVVCWNSMIVGCVTH 315
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 33/228 (14%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +GF N L+ MY K ++ A +F+++ +++VISW++L++G+ G E AL
Sbjct: 364 IKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKAL 423
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M ++ + + SACA G+++H +S N LI MY
Sbjct: 424 QLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMY 483
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG------------EHVHGLK------ 163
KCG L A VFD+ RN ISW +++ Y Q G E V+G+K
Sbjct: 484 AKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDHY 543
Query: 164 ---IFLLSRKSGVAISEFSC------------ASVLGACAVLGNLKVG 196
I LL R + +E S+L AC V GNL++G
Sbjct: 544 ACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELG 591
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 196/614 (31%), Positives = 322/614 (52%), Gaps = 4/614 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG--MPEVALNY-FRLMVCCVL 72
LL Y + A+ +FD P + S+ A++ Q VAL++ R C
Sbjct: 103 LLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPE 162
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+ + A+ AC + G+ +H + G + V N L++MY K L A+
Sbjct: 163 AQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECARK 221
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VF+ +RN +SW S++S Q G GL +F R+ V SE++ A+V+ AC+ L
Sbjct: 222 VFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFG 281
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L G +H V K L + F++ L+++Y KC +LD A VF + DL W+ +I G
Sbjct: 282 LHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVG 341
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y Q G +A+ LF+ + + P+ VT + VL A A +++ G+ +H L +K+G +
Sbjct: 342 YTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEY 401
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V N ++D Y+KC+ + E+ + F + DVV+WN++I+G+ + +A+ L K M
Sbjct: 402 NVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSL 461
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+G P+ + N L+ S + + GK H VK F SN+ + +AL+++Y KCG L
Sbjct: 462 QGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLS 521
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
AR+VFD ++ +N V+W M+ GY G ++ ++ M ++ + PND F +LS C H
Sbjct: 522 ARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSH 581
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
G+V G YF+SM + I+P M H A +V + A G A EFI + P++ + VW
Sbjct: 582 SGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWG 641
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
L GC+ H L A ++++ PE ++++SN+Y MWD++ +R+ M+EK
Sbjct: 642 AFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLYTSNGMWDKSLAIRRWMQEKG 701
Query: 613 LKKDTGCSWTELQN 626
L K GCS +N
Sbjct: 702 LVKLPGCSSVGHEN 715
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 244/477 (51%), Gaps = 19/477 (3%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ MY K + A+K+F+ +P+RNV+SW+++ISG Q G L F M +
Sbjct: 204 NSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVP 263
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT ++AC++ G+ +HG + + GL NS +S L++MY KCG L A+ V
Sbjct: 264 PSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCV 323
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD + + W +++ Y Q G + L++FL R + +A + + A+VL A A L +L
Sbjct: 324 FDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDL 383
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G IH L K L V L+++YAKC+ + A R+F I D+ AW+++I GY
Sbjct: 384 SLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGY 443
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
A+ +A+ LF +M G P ++ L A + + + G+ +H +K F S
Sbjct: 444 AENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNI 503
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+V +L+ Y+KC L + + FDEM++ + V+W A+I G+ +I L +ML +
Sbjct: 504 YVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKD 563
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS-----NVVIG----SALVDMY 424
G PN +++IL+ S + GK+ FDS N+ + +VD+
Sbjct: 564 GVYPNDIAFTSILSTCSHSGMVTAGKRY--------FDSMAQHFNITPSMKHYACMVDVL 615
Query: 425 AKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALE-IYSMMQENKIKPN 479
A+ G L DA + D++ + S W L G H + A E I MM + +P+
Sbjct: 616 ARAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPD 672
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 175/384 (45%), Gaps = 3/384 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G N LL MYVK ++ A+ +FDE+ +++ W+ +I G++Q G P A
Sbjct: 292 VIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDA 351
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F + PN T +SA A D GK IHG + GL + V N L++M
Sbjct: 352 LRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDM 411
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC +S A +F ++ ++W S++S Y + L +F G + S
Sbjct: 412 YAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISV 471
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ L A LG+L +G IH K A + +V L+NLY KC L A RVF +
Sbjct: 472 VNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMND 531
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE-TIGGRQ 299
+ W A+IGGY G + +I LF +M G+ P+++ F+ +L + T G R
Sbjct: 532 RNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRY 591
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASC 358
S+ + ++D ++ LE++L+ D M + D W A + G
Sbjct: 592 FDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHS 651
Query: 359 HYGEAIELLKDML-FEGHCPNLYT 381
A E +K M+ P+LY
Sbjct: 652 RLQFAEEAIKRMMVLHPERPDLYV 675
>gi|90265232|emb|CAH67767.1| H0322F07.4 [Oryza sativa Indica Group]
gi|125550186|gb|EAY96008.1| hypothetical protein OsI_17879 [Oryza sativa Indica Group]
Length = 719
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 209/636 (32%), Positives = 331/636 (52%), Gaps = 14/636 (2%)
Query: 8 PNVITY--NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG--MPEVALNY 63
P + T+ N LL +Y + S + DA L P +V+S++ ++S S+ PE L
Sbjct: 50 PALTTFLANQLLSLYARLSAVPDALALLRSTPRPSVVSYNTVLSALSRAPRHAPE-GLRL 108
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
FR + L P + + D R+G H + G + V L+ MY +
Sbjct: 109 FRRLHASGLRPTAPSLCALLRTAGELRDRRAGAAAHSQAATLGFLASDIVPTALLQMYSQ 168
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG A VFD R+ ++W ++ + G L F + G+ +E + +SV
Sbjct: 169 CGAPRDANQVFDEMATRDGVAWNCVMHCNVRYGYLDRALGQFCQMVRGGLPPTESTLSSV 228
Query: 184 LGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
L C G+ G +H V K L+ D + L+++Y+ C LD A RVF I+ PD
Sbjct: 229 LSGCGRAGDCLRGRVLHGWVVKLEELDPDMPLQNALLDMYSSCGDLDTALRVFERIETPD 288
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKM----FSSGLMPSEVTFSYVLGAFADVKETIGGR 298
L +W+ LI G++ +G C A+ FV++ F ++P E T + V+ A A + GG+
Sbjct: 289 LVSWNTLIAGFSGVGDGCSAMHAFVQLKAVQFDERVVPDEYTLAAVVSASATLPAMFGGK 348
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
LH+ +IK G + FV NT+L+ Y + + FD + + DV+ W ++AGH +S
Sbjct: 349 PLHAEVIKAGLENSVFVGNTLLNMYFTNDDPHSARILFDSITQKDVIMWTEMVAGH-SSL 407
Query: 359 HYGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
GE A+ ML EG+ + ++ S+ LN ++++ ++ G+ H +VK G++ N+
Sbjct: 408 GEGELALMYFVSMLQEGYKVDSFSLSSALNSTTELAGLKQGEMLHAQVVKSGYEGNICAS 467
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+LVDMYAK G L A VF ++ +L WN+++ GY HG A +++ M + ++
Sbjct: 468 GSLVDMYAKNGALPGAYLVFRNIQRPDLKCWNSIIGGYGNHGNSEMAFKLFGEMIRDGLQ 527
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ T+I +LSAC H GLVE+G Y+ M+ D GI P H S+V L G A +
Sbjct: 528 PDHVTYISILSACSHCGLVEKGKFYWFCMMTD-GIVPGFKHYTSMVSLLGRAGLLDEAVD 586
Query: 538 FIKSSPIEPN-KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+ SP +WR LLS C T ++L +G +AAE+ L DP+D S HI+LSN+YA
Sbjct: 587 LMMKSPFAKKCPELWRILLSSCITFRNLSIGVHAAEQALEQDPDDISTHILLSNLYASLG 646
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
WD A++RK M+ K+ G SW E++N +H FS
Sbjct: 647 KWDFVAEIRKRMRGLMADKEPGLSWVEMKNVVHVFS 682
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 206/436 (47%), Gaps = 5/436 (1%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
T GF + I LL MY + DA ++FDEM R+ ++W+ ++ + G + AL
Sbjct: 149 TLGFLASDIVPTALLQMYSQCGAPRDANQVFDEMATRDGVAWNCVMHCNVRYGYLDRALG 208
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLINMY 121
F MV L P T +S C GD G+ +HG + + L+ + + N L++MY
Sbjct: 209 QFCQMVRGGLPPTESTLSSVLSGCGRAGDCLRGRVLHGWVVKLEELDPDMPLQNALLDMY 268
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL----LSRKSGVAISE 177
CG L +A VF+ + +SW +L++ + G+ + F+ + V E
Sbjct: 269 SSCGDLDTALRVFERIETPDLVSWNTLIAGFSGVGDGCSAMHAFVQLKAVQFDERVVPDE 328
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
++ A+V+ A A L + G +H+ V K LE FV L+N+Y + A +F +
Sbjct: 329 YTLAAVVSASATLPAMFGGKPLHAEVIKAGLENSVFVGNTLLNMYFTNDDPHSARILFDS 388
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
I D+ W+ ++ G++ LG+ A+ FV M G + S L + ++ G
Sbjct: 389 ITQKDVIMWTEMVAGHSSLGEGELALMYFVSMLQEGYKVDSFSLSSALNSTTELAGLKQG 448
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
LH+ ++K G+ + +++D Y+K L + F + D+ WN++I G+
Sbjct: 449 EMLHAQVVKSGYEGNICASGSLVDMYAKNGALPGAYLVFRNIQRPDLKCWNSIIGGYGNH 508
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+ A +L +M+ +G P+ TY +IL+ S +E GK C++ G
Sbjct: 509 GNSEMAFKLFGEMIRDGLQPDHVTYISILSACSHCGLVEKGKFYWFCMMTDGIVPGFKHY 568
Query: 418 SALVDMYAKCGRLNDA 433
+++V + + G L++A
Sbjct: 569 TSMVSLLGRAGLLDEA 584
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G +V N LL MY + A+ LFD + +++VI W+ +++G S +G E+A
Sbjct: 354 VIKAGLENSVFVGNTLLNMYFTNDDPHSARILFDSITQKDVIMWTEMVAGHSSLGEGELA 413
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L YF M+ + + ++ A+++ + G+ +H ++ +SG E N S L++M
Sbjct: 414 LMYFVSMLQEGYKVDSFSLSSALNSTTELAGLKQGEMLHAQVVKSGYEGNICASGSLVDM 473
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A VF + W S++ Y G K+F + G+ +
Sbjct: 474 YAKNGALPGAYLVFRNIQRPDLKCWNSIIGGYGNHGNSEMAFKLFGEMIRDGLQPDHVTY 533
Query: 181 ASVLGACAVLGNLKVG 196
S+L AC+ G ++ G
Sbjct: 534 ISILSACSHCGLVEKG 549
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG+ N+ L+ MY K + A +F + ++ W+++I G+ G E+A
Sbjct: 455 VVKSGYEGNICASGSLVDMYAKNGALPGAYLVFRNIQRPDLKCWNSIIGGYGNHGNSEMA 514
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M+ L+P++ TY+ +SAC+ G GK M G+ ++++
Sbjct: 515 FKLFGEMIRDGLQPDHVTYISILSACSHCGLVEKGKFYWFCMMTDGIVPGFKHYTSMVSL 574
Query: 121 YGKCGLLSSA 130
G+ GLL A
Sbjct: 575 LGRAGLLDEA 584
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 198/613 (32%), Positives = 320/613 (52%), Gaps = 3/613 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV--CCVLE 73
LL Y + A+++ DE P + ++ + + G AL R M C
Sbjct: 61 LLSCYAALGDLASARRVLDETPRPDPYTYRVALGWHAAAGRHADALALHRGMRRRCPEAH 120
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
+ A+ A D R G+ +H ++G + V NCL++MY K G L +A+ V
Sbjct: 121 DDVVLLSLALKASVRSADFRYGRRLHCNAVKAG-GADGFVMNCLVDMYAKAGDLENARKV 179
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD L RN +SW S+LS Q G GL +F R+ V SE++ ASVL AC +LG+L
Sbjct: 180 FDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSL 239
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
G +H V K + F+ F+ ++++Y KC +++ A R+F + DL W+ +I GY
Sbjct: 240 HQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGY 299
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q G +A+ LF ++P+ VT + VL A A ++ GR +H++ +K+
Sbjct: 300 TQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIEND 359
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V N ++D Y+KC+ L E+ F + DVV+WN+LIAG++ + EA+ L M +
Sbjct: 360 VVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQ 419
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G P+ + N L+ + + GK H VK F SNV + +AL+++Y KC L A
Sbjct: 420 GSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSA 479
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
++VF +S +N V+W M+ GY G ++++ + M ++ I+PN+ F +LS C H
Sbjct: 480 QRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHT 539
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G+V G F+SM + I+P M H A +V + A G A EFI+ P+ + +W
Sbjct: 540 GMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPADISIWGA 599
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
L GCK H L G A +++ P+ ++++SN+Y WD++ +R++M+E+ L
Sbjct: 600 FLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVLMSNLYTSYGRWDKSLAIRRLMQERGL 659
Query: 614 KKDTGCSWTELQN 626
K GCS L+N
Sbjct: 660 VKLPGCSSVGLEN 672
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 232/479 (48%), Gaps = 23/479 (4%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ MY K + +A+K+FD + RNV+SW++++SG Q G E L F M +
Sbjct: 161 NCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVL 220
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT + AC G G+ +HG + + G+ N ++ +++MY KCG + A+ +
Sbjct: 221 PSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRL 280
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD + + W +++ Y Q G + L +F + + + + A+VL A A L NL
Sbjct: 281 FDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNL 340
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G IH++ K + + V L+++YAKC+ L A+ +F I D+ W++LI GY
Sbjct: 341 SLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGY 400
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ EA+ LF +M G P ++ L A + + + G+ H+ +K F S
Sbjct: 401 VENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNV 460
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+V +L+ Y+KC L + + F EM E + V+W A+I G+ +I+LL ML +
Sbjct: 461 YVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKD 520
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS-----NVVIG----SALVDMY 424
PN +++IL+ S + GK FDS N+ + +VD+
Sbjct: 521 NIQPNEVVFTSILSTCSHTGMVSVGKMC--------FDSMAQYFNITPSMKHYACMVDVL 572
Query: 425 AKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG---LGREALEIYSMMQENKIKPN 479
A+ G L +A + + +S W L G H G EA I MM + KP+
Sbjct: 573 ARAGNLEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEA--INRMMVLHPDKPD 629
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 9/264 (3%)
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
R LH+ ++ G +L Y+ L + + DE D ++ + H A+
Sbjct: 40 RALHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPDPYTYRVALGWHAAA 99
Query: 358 CHYGEAIELLKDMLFEGHCP----NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ +A+ L + M CP ++ S L S +G++ HC VK G
Sbjct: 100 GRHADALALHRGM--RRRCPEAHDDVVLLSLALKASVRSADFRYGRRLHCNAVKAGGADG 157
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V+ + LVDMYAK G L +ARKVFD + +N+VSW +ML G Q+G E L +++ M+E
Sbjct: 158 FVM-NCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMRE 216
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
++ P++ T VL AC +G + +G S+I+ HG+ A+V+ ++ G+
Sbjct: 217 ERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIK-HGMVFNPFITAAVLDMYVKCGEVE 275
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSG 557
A + V+W ++ G
Sbjct: 276 DARRLFDELGFV-DLVLWTTMIVG 298
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 6/248 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N + N L+ MY K +++A +F + ++V++W++LI+G+ + M AL F M
Sbjct: 358 NDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMR 417
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
P+ + V A+SAC GD GK H + N +V+ L+N+Y KC L
Sbjct: 418 VQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLP 477
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
SAQ VF ERNS++W +++ Y G+ + + K + +E S+L C+
Sbjct: 478 SAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCS 537
Query: 189 VLGNLKVG-MQIHSLV--FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP-DLT 244
G + VG M S+ F + M +++ A+ L+ A + +P D++
Sbjct: 538 HTGMVSVGKMCFDSMAQYFNITPSMKHYACM--VDVLARAGNLEEALEFIQKMPMPADIS 595
Query: 245 AWSALIGG 252
W A + G
Sbjct: 596 IWGAFLHG 603
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 14/166 (8%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ F NV LL +Y K + + AQ++F EM ERN ++W A+I G+ G ++
Sbjct: 452 VKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSI 511
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM--YRSGLELNSHVSNCLIN 119
+ M+ ++PN + +S C+ G GK M Y + H + C+++
Sbjct: 512 DLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYA-CMVD 570
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKI 164
+ + G L A +F+ + + W G +HG K+
Sbjct: 571 VLARAGNLEEALEFIQKMPMPADISIW----------GAFLHGCKL 606
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 193/644 (29%), Positives = 332/644 (51%), Gaps = 49/644 (7%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G N+ N LL MY K I DA + F ++PE N +S++A++ G + A
Sbjct: 164 IKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAF 223
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRG----------DARS----GKEIHGRMYRSGL 107
FRLM+ + + + + C+ G D S G+++H + G
Sbjct: 224 RLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGF 283
Query: 108 ELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLL 167
E + H++N L++MY K G + SA+ +F E + +SW +++ Y Q + ++
Sbjct: 284 ESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQR 343
Query: 168 SRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK 227
+ G E + ++L AC G+++ G Q+
Sbjct: 344 MQYHGFEPDEITYVNMLVACIKSGDIEAGRQM---------------------------- 375
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
F + P L++W+ ++ GY+Q EA+ LF +M + P T + +L +
Sbjct: 376 -------FDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSS 428
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
A + GGRQ+H++ K F + ++A+ ++ YSKC +E + + FD + E D+V W
Sbjct: 429 LAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCW 488
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
N+++AG + EA K M +G P+ ++Y+ +L+ + + ++ G+Q H I +
Sbjct: 489 NSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAR 548
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
G+ ++ +GSAL+DMY+KCG ++ AR VFD + KN V+WN M+ GYAQ+G G EA+ +
Sbjct: 549 EGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLL 608
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA 527
Y M + KP+ TF+ VL+AC H GLV+ G FNSM ++HG+ P +DH ++
Sbjct: 609 YEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLG 668
Query: 528 CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIM 587
G+ A I P + + ++W LLS C+ + D+ L R AAE++ DP++++ +++
Sbjct: 669 RAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVL 728
Query: 588 LSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
L+N+Y+ WD+ VR++M + KD G SW E +N M F
Sbjct: 729 LANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAF 772
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/515 (27%), Positives = 249/515 (48%), Gaps = 49/515 (9%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
++ T+N +L Y K S + DA LF EMPERN++SW+ LIS ++ G + AL + M
Sbjct: 70 DIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMS 129
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
P ++T +SAC + D G+ HG + GL+ N +V N L+ MY KC +
Sbjct: 130 REGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIG 189
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A F E N +S+ +++ + ++F L ++ + + S +SVLG C+
Sbjct: 190 DAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCS 249
Query: 189 --------------VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
VL + G Q+H L K E D + L+++YAK +D A +
Sbjct: 250 RGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMI 309
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F N+ + +W+ +I GY Q ++ +AI+ +M G P E+T+ +L A +
Sbjct: 310 FVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDI 369
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
GRQ+ + SS+ NT+L YS+ E
Sbjct: 370 EAGRQMFDGMSSPSLSSW----NTILSGYSQNE--------------------------- 398
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
++ EA++L ++M F P+ T + IL+ + + +E G+Q H K F +++
Sbjct: 399 ----NHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDI 454
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ S L+ MY+KCG++ A+++FD ++ ++V WN+M+ G + + L +EA + M+E
Sbjct: 455 YLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREK 514
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
+ P+ ++ VLS C + + +G + + R+
Sbjct: 515 GMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIARE 549
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 217/468 (46%), Gaps = 81/468 (17%)
Query: 78 TYVGAV-SACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
TY+ ++ C + +GK IH M RS L ++ +SN LI Y KC + +++ +FD
Sbjct: 6 TYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQ 65
Query: 137 SLERNSISWVSLLSSYCQCGE----HV---------------------------HGLKIF 165
+R+ +W ++L +YC+ E HV L ++
Sbjct: 66 MPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVY 125
Query: 166 LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC 225
+ G + F+ ASVL AC L +++ G + H + K L+ + +V L+ +YAKC
Sbjct: 126 YRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKC 185
Query: 226 EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
+ A + F ++ P+ +++A++GG A + EA LF M + + V+ S VL
Sbjct: 186 RCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVL 245
Query: 286 GAFAD--------------VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
G + + + G+Q+H L IK GF S + N++LD Y+K ++
Sbjct: 246 GVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDS 305
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+ F M E VVSWN +IAG+ +AIE L+ M + G P+ TY N+L
Sbjct: 306 AEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLV---- 361
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
CI K G + R++FD +SS +L SWNT+
Sbjct: 362 -----------ACI--------------------KSGDIEAGRQMFDGMSSPSLSSWNTI 390
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
L GY+Q+ +EA++++ MQ + P+ T +LS+ + L+E G
Sbjct: 391 LSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGG 438
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 181/421 (42%), Gaps = 82/421 (19%)
Query: 275 MPSEVTF-SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
M ++ T+ + +L D K + G+ +H+ +++ S TF++N +++FY+KC ++ S
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML---------------------- 371
+ FD+M + D+ +WNA++ + + +A L +M
Sbjct: 61 RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQK 120
Query: 372 ---------FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
EG P +T +++L+ + +E G++ H +K G D+N+ +G+AL+
Sbjct: 121 ALGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLG 180
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MYAKC + DA + F + N VS+ M+ G A EA ++ +M N+I + +
Sbjct: 181 MYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVS 240
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRD-------------HGISPRMDHIASVVHLFACR 529
VL C G E G H N ++ HG + S++ ++A
Sbjct: 241 LSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKN 300
Query: 530 G-------------------------------QTRRAYEFIKSSP---IEPNKVVWRCLL 555
G Q+ +A E+++ EP+++ + +L
Sbjct: 301 GNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNML 360
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
C D+ GR + + S P +S + +LS Y++ E K+ + M+ +S+
Sbjct: 361 VACIKSGDIEAGRQMFDGMSS--PSLSSWNTILSG-YSQNENHKEAVKLFREMQFRSVHP 417
Query: 616 D 616
D
Sbjct: 418 D 418
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 306/550 (55%), Gaps = 4/550 (0%)
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
LI Y + GL+ A+ +FD +R+ ++W ++++ Y + + F K G + +
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE-KLDLASRVF 235
EF+ +SVL +C + L G +H +V K +E +V ++N+YA C ++ A +F
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIF 170
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+I++ + W+ LI G+ LG + ++ +M + + + A A +
Sbjct: 171 RDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVT 230
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+Q+H+ +IK GF S V N++LD Y +C L E+ F EM++ D+++WN LI+ L
Sbjct: 231 TGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS-EL 289
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
EA+ + + +G PN YT+++++ ++I A+ G+Q H I + GF+ NV
Sbjct: 290 ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVE 349
Query: 416 IGSALVDMYAKCGRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +AL+DMYAKCG + D+++VF + +NLVSW +M++GY HG G EA+E++ M +
Sbjct: 350 LANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS 409
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
I+P+ F+ VLSAC H GLVE+G YFN M ++GI+P D VV L G+
Sbjct: 410 GIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGE 469
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHK-DLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
AYE ++ P +P++ W +L CK HK + ++ R AA K++ P+ ++MLS +YA
Sbjct: 470 AYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYA 529
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W + A+VRK+M+ KK+ G SW ++N++ F+ S ++ V+ L
Sbjct: 530 AEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIE 589
Query: 654 HLFDGGYVPD 663
+ GYVP+
Sbjct: 590 ETREAGYVPE 599
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 232/452 (51%), Gaps = 5/452 (1%)
Query: 11 ITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC 70
I +L++ Y + + +A+ LFDEMP+R+V++W+A+I+G++ A F MV
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL-LSS 129
PN +T + +C + G +HG + + G+E + +V N ++NMY C + + +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A +F +N ++W +L++ + G+ + GLK++ ++ + + A A
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
+ ++ G QIH+ V K + + V +++LY +C L A F ++ DL W+ L
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I + + EA+ +F + S G +P+ TF+ ++ A A++ G+QLH I + GF
Sbjct: 286 ISELER-SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF 344
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLK 368
+ +AN ++D Y+KC + +S + F E+ D ++VSW +++ G+ + + EA+EL
Sbjct: 345 NKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M+ G P+ + +L+ +E G K + + G + + I + +VD+ +
Sbjct: 405 KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 428 GRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH 458
G++ +A ++ + + K + +W +L H
Sbjct: 465 GKIGEAYELVERMPFKPDESTWGAILGACKAH 496
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 132/255 (51%), Gaps = 4/255 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF N+ N +L +Y + +++A+ F EM ++++I+W+ LIS + E A
Sbjct: 239 VIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSE-A 297
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ PN YT+ V+ACA+ G+++HGR++R G N ++N LI+M
Sbjct: 298 LLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDM 357
Query: 121 YGKCGLLSSAQFVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG + +Q VF ++ RN +SW S++ Y G +++F SG+
Sbjct: 358 YAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIV 417
Query: 180 CASVLGACAVLGNLKVGMQIHSLV-FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+VL AC G ++ G++ +++ + + D+ + +++L + K+ A + +
Sbjct: 418 FMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
Query: 239 QL-PDLTAWSALIGG 252
PD + W A++G
Sbjct: 478 PFKPDESTWGAILGA 492
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 4/244 (1%)
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
N ++ ++ K L+EE+ FDEM + DVV+W A+I G+ +S + A E +M+ +
Sbjct: 47 LATNLIVSYFEKG-LVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG-RLND 432
G PN +T S++L ++ + +G H +VK G + ++ + +A+++MYA C +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A +F + KN V+W T++ G+ G G L++Y M + + A
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
I V G S+I+ G + + S++ L+ G A + + + + W
Sbjct: 226 IDSVTTGKQIHASVIK-RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLITWN 283
Query: 553 CLLS 556
L+S
Sbjct: 284 TLIS 287
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
++ + L+ Y + G + +AR +FD + +++V+W M+ GYA A E + M +
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
PN+ T VL +C ++ ++ G + ++ G+ + ++++++A T
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYG-ALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
A I N V W L++G D + G +++L + E T I ++
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA 219
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 200/672 (29%), Positives = 351/672 (52%), Gaps = 4/672 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEV 59
++ G+H N L+ MY K ++ A++LFD E+ + + W++++S +S G
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 267
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLI 118
L FR M PN YT V A++AC A+ GKEIH + +S + +V N LI
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALI 327
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY +CG + A+ + + ++W SL+ Y Q + L+ F +G E
Sbjct: 328 AMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEV 387
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S S++ A L NL GM++H+ V K + + V LI++Y+KC R F +
Sbjct: 388 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 447
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
DL +W+ +I GYAQ EA++LF + + E+ +L A + +K + +
Sbjct: 448 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVK 507
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H I++ G T + N ++D Y KC + + + F+ + DVVSW ++I+ +
Sbjct: 508 EIHCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNG 566
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ EA+EL + M+ G + IL+ ++ + A+ G++ HC +++ GF I
Sbjct: 567 NESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV 626
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
A+VDMYA CG L A+ VFD + K L+ + +M+ Y HG G+ A+E++ M+ + P
Sbjct: 627 AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSP 686
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ +F+ +L AC H GL++EG + M ++ + P +H +V + A+EF
Sbjct: 687 DHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEF 746
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
+K EP VW LL+ C++H + +G AA+++L +P++ +++SNV+AE W
Sbjct: 747 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRW 806
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL-FD 657
++ KVR MK ++K GCSW E+ K+H F+ + + +++E +++++ L +
Sbjct: 807 NDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLERE 866
Query: 658 GGYVPDPIYSSH 669
GYV D + H
Sbjct: 867 VGYVADTKFVLH 878
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 273/522 (52%), Gaps = 4/522 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY K ++DA+K+FDEMP+R +W+ +I + G P AL + M +
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
++ + ACA D RSG E+H + + G + N L++MY K LS+A+ +FD
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 136 ASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
E+ +++ W S+LSSY G+ + L++F +G A + ++ S L AC K
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 195 VGMQIHSLVFKCALEFDK-FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G +IH+ V K + + +V LI +Y +C K+ A R+ + D+ W++LI GY
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q EA++ F M ++G EV+ + ++ A + + G +LH+ +IK G+ S
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V NT++D YSKC L + F M + D++SW +IAG+ + + EA+EL +D+ +
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
+ +IL SS + ++ K+ HC I++ G + VI + LVD+Y KC + A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYA 540
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+VF+ + K++VSW +M+ A +G EA+E++ M E + + + +LSA +
Sbjct: 541 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASL 600
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+ +G ++R G +VV ++AC G + A
Sbjct: 601 SALNKGREIHCYLLRK-GFCLEGSIAVAVVDMYACCGDLQSA 641
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 229/417 (54%), Gaps = 7/417 (1%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRS--GLELNSHVSNCLINMYGKCGLLSSAQFVF 134
+ YV + C R G+++H R++++ EL+ ++ L+ MYGKCG L A+ VF
Sbjct: 83 FAYV--LELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVF 139
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D +R + +W +++ +Y GE L ++ R GV + S ++L ACA L +++
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 199
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP-DLTAWSALIGGY 253
G ++HSL+ K F+ L+++YAK + L A R+F Q D W++++ Y
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG-FSSF 312
+ GK+ E ++LF +M +G P+ T L A G+++H+ ++K SS
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+V N ++ Y++C + ++ + +M+ DVV+WN+LI G++ + Y EA+E DM+
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
GH + + ++I+ S + + G + H ++K G+DSN+ +G+ L+DMY+KC
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 439
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ F + K+L+SW T++ GYAQ+ EALE++ + + +++ ++ +L A
Sbjct: 440 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
++ +L + A+ G+Q H I K P F+ + + G LV MY KCG L+DA KVFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKCGSLDDAEKVFD 140
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+ + +WNTM+ Y +G AL +Y M+ + ++F +L AC + +
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
G +S++ G + ++V ++A A + + V+W +LS
Sbjct: 201 GSE-LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 559 KT 560
T
Sbjct: 260 ST 261
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 200/672 (29%), Positives = 351/672 (52%), Gaps = 4/672 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEV 59
++ G+H N L+ MY K ++ A++LFD E+ + + W++++S +S G
Sbjct: 171 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 230
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLI 118
L FR M PN YT V A++AC A+ GKEIH + +S + +V N LI
Sbjct: 231 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALI 290
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY +CG + A+ + + ++W SL+ Y Q + L+ F +G E
Sbjct: 291 AMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEV 350
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S S++ A L NL GM++H+ V K + + V LI++Y+KC R F +
Sbjct: 351 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 410
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
DL +W+ +I GYAQ EA++LF + + E+ +L A + +K + +
Sbjct: 411 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVK 470
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H I++ G T + N ++D Y KC + + + F+ + DVVSW ++I+ +
Sbjct: 471 EIHCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNG 529
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ EA+EL + M+ G + IL+ ++ + A+ G++ HC +++ GF I
Sbjct: 530 NESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV 589
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
A+VDMYA CG L A+ VFD + K L+ + +M+ Y HG G+ A+E++ M+ + P
Sbjct: 590 AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSP 649
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ +F+ +L AC H GL++EG + M ++ + P +H +V + A+EF
Sbjct: 650 DHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEF 709
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
+K EP VW LL+ C++H + +G AA+++L +P++ +++SNV+AE W
Sbjct: 710 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRW 769
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL-FD 657
++ KVR MK ++K GCSW E+ K+H F+ + + +++E +++++ L +
Sbjct: 770 NDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLERE 829
Query: 658 GGYVPDPIYSSH 669
GYV D + H
Sbjct: 830 VGYVADTKFVLH 841
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 265/513 (51%), Gaps = 4/513 (0%)
Query: 25 RINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVS 84
R +K+FDEMP+R +W+ +I + G P AL + M + ++ +
Sbjct: 94 RAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLK 153
Query: 85 ACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER-NSI 143
ACA D RSG E+H + + G + N L++MY K LS+A+ +FD E+ +++
Sbjct: 154 ACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAV 213
Query: 144 SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV 203
W S+LSSY G+ + L++F +G A + ++ S L AC K+G +IH+ V
Sbjct: 214 LWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASV 273
Query: 204 FKCALEFDK-FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEA 262
K + + +V LI +Y +C K+ A R+ + D+ W++LI GY Q EA
Sbjct: 274 LKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEA 333
Query: 263 IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
++ F M ++G EV+ + ++ A + + G +LH+ +IK G+ S V NT++D
Sbjct: 334 LEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDM 393
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
YSKC L + F M + D++SW +IAG+ + + EA+EL +D+ + +
Sbjct: 394 YSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 453
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+IL SS + ++ K+ HC I++ G + VI + LVD+Y KC + A +VF+ +
Sbjct: 454 GSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKG 512
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
K++VSW +M+ A +G EA+E++ M E + + + +LSA + + +G
Sbjct: 513 KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREI 572
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
++R G +VV ++AC G + A
Sbjct: 573 HCYLLRK-GFCLEGSIAVAVVDMYACCGDLQSA 604
>gi|15236431|ref|NP_192561.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208454|sp|Q9SUF9.1|PP305_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g08210
gi|5262194|emb|CAB45791.1| putative protein [Arabidopsis thaliana]
gi|7267461|emb|CAB81157.1| putative protein [Arabidopsis thaliana]
gi|332657209|gb|AEE82609.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 686
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 205/655 (31%), Positives = 339/655 (51%), Gaps = 35/655 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G NV N+++ MYV F ++DA K+FDEM ERN+++W+ ++SG++ G P A
Sbjct: 31 VIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKA 90
Query: 61 LNYFRLMVCCVLEP-NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ +R M+ E N + Y + AC GD + G ++ R+ + L + + N +++
Sbjct: 91 IELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVD 150
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-------------L 166
MY K G L A F L +S SW +L+S YC+ G + +F L
Sbjct: 151 MYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCL 210
Query: 167 LS-----------------RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+S ++ G+ + F+ L AC+ G L +G Q+H V K LE
Sbjct: 211 ISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLE 270
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLP---DLTAWSALIGGYAQLGKACEAIDLF 266
F LI++Y+ C L A+ VF +L + W++++ G+ + A+ L
Sbjct: 271 SSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLL 330
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
++++ S L T S L + G Q+HSL++ G+ V + ++D ++
Sbjct: 331 LQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANV 390
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
++++ K F + D+++++ LI G + S A L ++++ G + + SNIL
Sbjct: 391 GNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNIL 450
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+ S + ++ WGKQ H +K G++S V +ALVDMY KCG +++ +FD + +++V
Sbjct: 451 KVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVV 510
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
SW ++VG+ Q+G EA + M I+PN TF+G+LSAC H GL+EE +M
Sbjct: 511 SWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETM 570
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVL 566
++G+ P ++H VV L G + A E I P+EP+K +W LL+ C THK+ L
Sbjct: 571 KSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGL 630
Query: 567 GRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSW 621
AEK+L P+D S + LSN YA MWD+ +KVR+ K K K++G SW
Sbjct: 631 VTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAK-KLGAKESGMSW 684
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/553 (24%), Positives = 243/553 (43%), Gaps = 91/553 (16%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
C + G+ I + + G+ N ++N +I+MY LLS A VFD ERN ++W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 146 VSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV 203
+++S Y G+ ++++ +L + A +EF ++VL AC ++G++++G+ ++ +
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAA-NEFMYSAVLKACGLVGDIQLGILVYERI 133
Query: 204 FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
K L D + ++++Y K +L A+ F I P T+W+ LI GY + G EA+
Sbjct: 134 GKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAV 193
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG--------------------------- 296
LF +M P+ V+++ ++ F D
Sbjct: 194 TLFHRMPQ----PNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACS 249
Query: 297 -------GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD---EHDVVS 346
G+QLH ++K G S F + ++D YS C L + F + V
Sbjct: 250 FGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV 309
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
WN++++G L + A+ LL + C + YT S L I + + G Q H +V
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
G++ + ++GS LVD++A G + DA K+F L +K++++++ ++ G + G +L
Sbjct: 370 VSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF--NSLA 427
Query: 467 IYSMMQENKIKPNDNTFI--GVLSAC---------------------------------- 490
Y + K+ + + FI +L C
Sbjct: 428 FYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDM 487
Query: 491 -VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF---IKSSPIEP 546
V G ++ G F+ M+ +S ++ F G+ A+ + + + IEP
Sbjct: 488 YVKCGEIDNGVVLFDGMLERDVVS-----WTGIIVGFGQNGRVEEAFRYFHKMINIGIEP 542
Query: 547 NKVVWRCLLSGCK 559
NKV + LLS C+
Sbjct: 543 NKVTFLGLLSACR 555
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 188/415 (45%), Gaps = 42/415 (10%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+ L C + K G I + V K + + F+A +I++Y L A +VF +
Sbjct: 9 AAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSE 68
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSS-GLMPSEVTFSYVL---GAFADVK---- 292
++ W+ ++ GY GK +AI+L+ +M S +E +S VL G D++
Sbjct: 69 RNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGIL 128
Query: 293 --ETIGGRQLHSLIIKM---------------GFSSFTFVA-------NTVLDFYSKCEL 328
E IG L ++ M SSF + NT++ Y K L
Sbjct: 129 VYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGL 188
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
++E++ F M + +VVSWN LI+G + A+E L M EG + + L
Sbjct: 189 MDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKA 247
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF--DHLSSKNLV 446
S + GKQ HCC+VK G +S+ SAL+DMY+ CG L A VF + L+ + V
Sbjct: 248 CSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Query: 447 S-WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
+ WN+ML G+ + AL + + ++ + + T G L C++ + G +S
Sbjct: 308 AVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ-VHS 366
Query: 506 MIRDHGISPRMDHIAS--VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
++ G +D+I +V L A G + A++ P + + + L+ GC
Sbjct: 367 LVVVSGY--ELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGC 418
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 318/584 (54%), Gaps = 8/584 (1%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLINMYGKCGLLSSAQFVFD 135
Y+Y AC G+ +H RM R G+E S + NC++ MY +C L A +FD
Sbjct: 84 YSYQCLFEACRELRSLSHGRLLHDRM-RMGIENPSVLLQNCVLQMYCECRSLEDADKLFD 142
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
E N++S +++S+Y + G + +F SG ++L + L
Sbjct: 143 EMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDF 202
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G QIH+ V + L + + G++N+Y KC L A RVF + + A + L+ GY Q
Sbjct: 203 GRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQ 262
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G+A +A+ LFV + + G+ FS VL A A ++E G+Q+H+ + K+G S V
Sbjct: 263 AGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSV 322
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE-G 374
++DFY KC E + + F E+ E + VSW+A+I+G+ + EA++ K + +
Sbjct: 323 GTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNA 382
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
N +TY++I S + G Q H +K + SAL+ MY+KCG L+DA
Sbjct: 383 SILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAN 442
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+VF+ + + ++V+W + G+A +G EAL ++ M +KPN TFI VL+AC H G
Sbjct: 443 EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAG 502
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
LVE+G H ++M+R + ++P +DH ++ ++A G A +F+K+ P EP+ + W+C
Sbjct: 503 LVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCF 562
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
LSGC THK+L LG A E++ DPEDT+ +++ N+Y A W+E A++ K+M E+ LK
Sbjct: 563 LSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLK 622
Query: 615 KDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
K+ CSW + + K+H F Q +++E + + FDG
Sbjct: 623 KELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKE-----FDG 661
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/457 (30%), Positives = 231/457 (50%), Gaps = 7/457 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+P+V+ N +L MY + + DA KLFDEM E N +S + +IS +++ G+ + A+ F
Sbjct: 115 NPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSG 174
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ +P Y + + + G++IH + R+GL N+ + ++NMY KCG
Sbjct: 175 MLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A+ VFD + ++ L+ Y Q G LK+F+ GV F + VL A
Sbjct: 235 LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKA 294
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA L L +G QIH+ V K LE + V L++ Y KC + A R F I+ P+ +W
Sbjct: 295 CASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSW 354
Query: 247 SALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
SA+I GY Q+ + EA+ F + S + + + T++ + A + + + G Q+H+ I
Sbjct: 355 SAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAI 414
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K + + ++ YSKC L+++ + F+ MD D+V+W A I+GH + EA+
Sbjct: 415 KRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALR 474
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCC---IVKPGFDSNVVIGSALVD 422
L + M+ G PN T+ +L S +E GK HC + K + ++D
Sbjct: 475 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK--HCLDTMLRKYNVAPTIDHYDCMID 532
Query: 423 MYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
+YA+ G L++A K ++ + +SW L G H
Sbjct: 533 IYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTH 569
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 187/356 (52%), Gaps = 3/356 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G N ++ MYVK + A+++FD+M + ++ + L+ G++Q G A
Sbjct: 210 VIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDA 269
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F +V +E + + + + ACAS + GK+IH + + GLE V L++
Sbjct: 270 LKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDF 329
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
Y KC SA F E N +SW +++S YCQ + +K F L K+ ++ F+
Sbjct: 330 YIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFT 389
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+ AC+VL + +G Q+H+ K +L ++ LI +Y+KC LD A+ VF ++
Sbjct: 390 YTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD 449
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PD+ AW+A I G+A G A EA+ LF KM S G+ P+ VTF VL A + G+
Sbjct: 450 NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKH 509
Query: 300 -LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
L +++ K + + ++D Y++ LL+E+LK M E D +SW ++G
Sbjct: 510 CLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 181/389 (46%), Gaps = 3/389 (0%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
K+GV++S +S + AC L +L G +H + + ++ +Y +C L+
Sbjct: 76 KAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLE 135
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A ++F + + + + +I YA+ G +A+ LF M +SG P ++ +L +
Sbjct: 136 DADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLV 195
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ + GRQ+H+ +I+ G S T + +++ Y KC L + + FD+M V+
Sbjct: 196 NPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTG 255
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
L+ G+ + +A++L D++ EG + + +S +L + + + GKQ H C+ K G
Sbjct: 256 LMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLG 315
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY- 468
+S V +G+ LVD Y KC A + F + N VSW+ ++ GY Q EA++ +
Sbjct: 316 LESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFK 375
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
S+ +N N T+ + AC + G I+ I + A + C
Sbjct: 376 SLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC 435
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G A E +S P+ V W +SG
Sbjct: 436 -GCLDDANEVFESMD-NPDIVAWTAFISG 462
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 194/572 (33%), Positives = 309/572 (54%), Gaps = 7/572 (1%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
+ C+ R G +H ++ + VSN ++N+Y KC L A+ VFD ERN
Sbjct: 10 IHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERNL 69
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
+SW +++S Y Q GE + L +F K + +E+ ASV+ ACA L L G QIH
Sbjct: 70 VSWSAMISGYEQIGEPISALGLF---SKLNIVPNEYVYASVISACASLKGLVQGKQIHGQ 126
Query: 203 VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEA 262
K L+ FV+ LI +Y KC K A ++ + A++ALI G+ + + +
Sbjct: 127 ALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKG 186
Query: 263 IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
++ M+ G P TF +LG + G LH IK+ +S F+ N ++
Sbjct: 187 FEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITM 246
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYT 381
YSK LLEE+ K F ++E D++SWN I+ + +A+E K+ML E P+ +T
Sbjct: 247 YSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFT 306
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
+++ L S + ++ GKQ H +++ +V G+AL++MYAKCG + A +F +
Sbjct: 307 FASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKME 366
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
+NLVSWNTM+ G+ HG G +A E+++ M+ +KP+ TF+G+L+A H GLV+EG
Sbjct: 367 HQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLV 426
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
YFNSM +GISP ++H + ++ L G+ A E++K P + VV LLS C+ H
Sbjct: 427 YFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLSACRLH 486
Query: 562 KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSW 621
D+ G+ A ++L P TS +++LSN+YA MWD A+ K++K LKK+ G S
Sbjct: 487 GDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLKKEPGHSL 546
Query: 622 TELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
E+ F+ F+ + + E+M+ L +
Sbjct: 547 IEVNGTFEKFTVVDFSHSR---IEEIMDMLKI 575
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 226/436 (51%), Gaps = 5/436 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I + +VI NH+L +Y K ++ +A+++FDEM ERN++SWSA+ISG+ QIG P AL
Sbjct: 30 IKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERNLVSWSAMISGYEQIGEPISAL 89
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F + + PN Y Y +SACAS GK+IHG+ + GL+ S VSN LI MY
Sbjct: 90 GLFSKLN---IVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMY 146
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG S A ++ +LE N +++ +L++ + + + G ++ + + G F+
Sbjct: 147 MKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFV 206
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+LG C +LK G +H K L F+ +I +Y+K L+ A + F +I+
Sbjct: 207 GLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEK 266
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSS-GLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL +W+ I + +A++ F +M + + P E TF+ L A + + G+Q+
Sbjct: 267 DLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQI 326
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +I+ N +++ Y+KC + ++ F +M+ ++VSWN +IAG
Sbjct: 327 HGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFG 386
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
G+A EL M G P+ T+ +L S+ ++ G + + G + S
Sbjct: 387 GKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSC 446
Query: 420 LVDMYAKCGRLNDARK 435
L+D+ + GRLN+A++
Sbjct: 447 LIDLLGRAGRLNEAKE 462
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 218/423 (51%), Gaps = 9/423 (2%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S++ C+ L+ G+ +H++ K A D V+ ++NLYAKC KL A +VF +
Sbjct: 7 GSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSE 66
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L +WSA+I GY Q+G+ A+ LF K+ ++P+E ++ V+ A A +K + G+Q+
Sbjct: 67 RNLVSWSAMISGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQGKQI 123
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +K G S +FV+N ++ Y KC ++L ++E E + V++NALI G + +
Sbjct: 124 HGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQP 183
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ E+L+ M +G P+ +T+ +L + ++ G+ HC +K +S IG+ +
Sbjct: 184 DKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLI 243
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS-MMQENKIKPN 479
+ MY+K L +A K F + K+L+SWNT + + +ALE + M+ E +++P+
Sbjct: 244 ITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPD 303
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ TF L+AC + + G +IR + + ++++++A G +AY +I
Sbjct: 304 EFTFASALAACSGLASMCNGKQIHGHLIRTR-LYQDVGAGNALINMYAKCGCIAKAY-YI 361
Query: 540 KSSPIEPNKVVWRCLLSGCKTH--KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
S N V W +++G H +A K + P D+ + L A +
Sbjct: 362 FSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKP-DSVTFVGLLTASNHAGL 420
Query: 598 WDE 600
DE
Sbjct: 421 VDE 423
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + + +V N L+ MY K I A +F +M +N++SW+ +I+GF G A
Sbjct: 330 LIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKA 389
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
F M ++P+ T+VG ++A G G M + G+ +CLI+
Sbjct: 390 FELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLID 449
Query: 120 MYGKCGLLSSAQ 131
+ G+ G L+ A+
Sbjct: 450 LLGRAGRLNEAK 461
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 185/557 (33%), Positives = 308/557 (55%), Gaps = 2/557 (0%)
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
LI Y GL A +F+ ER+ ++W +++ + C + +F +S V +
Sbjct: 49 LIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPN 108
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYA-KCEKLDLASRVF 235
F+ +SVL AC + L G HSL K ++ +V L+++YA C +D A VF
Sbjct: 109 AFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVF 168
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
++I L +W+ LI G+ G + F +M + P+ +FS A A +
Sbjct: 169 NDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYS 228
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+Q+H+ + K G V N++LD Y +C L ++ + F E+ E ++++WN LIAG+
Sbjct: 229 CGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYE 288
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
S E++ L M EG+ PN +T+++I +++ + G+Q H IV+ GFD NV
Sbjct: 289 RS-DSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVA 347
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ ++L+DMYAKCG ++D+ K+F + ++LVSW TM++GY HG G+EA++++ M ++
Sbjct: 348 LINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSG 407
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
I+P+ F+GVL C H GLV++G YF SM+ D+ I+P + VV L G+ A
Sbjct: 408 IQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEA 467
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
++ +++ P EP++ VW LL CK +K LG AA+++L P +++LS +YA
Sbjct: 468 FQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAE 527
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
W E AK+RK+MK + KK+ G SW E++N+++ F +H+V++ L H+
Sbjct: 528 GKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVLIWHM 587
Query: 656 FDGGYVPDPIYSSHFEE 672
D G V D Y + E
Sbjct: 588 KDDGDVTDLDYIVDYLE 604
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 215/435 (49%), Gaps = 4/435 (0%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P+V N L+ Y +A LF+E+PER+V++W+A+I GF+ A F M
Sbjct: 42 PSVWATN-LIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEM 100
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY-GKCGL 126
+ ++PN +T + AC G H + G++ + +V N L++MY C
Sbjct: 101 LRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCAT 160
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ A VF+ + ++SW +L++ + G+ GL F V + FS + A
Sbjct: 161 MDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARA 220
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA + + G QIH+ V K L D V ++++Y +C L A R F + +L W
Sbjct: 221 CASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITW 280
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ LI GY + + E++ LF +M S G P+ TF+ + A A++ G+Q+H I++
Sbjct: 281 NTLIAGYER-SDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVR 339
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
GF + N+++D Y+KC + +S K F +M D+VSW ++ G+ A + EA++L
Sbjct: 340 RGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKL 399
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSALVDMYA 425
+M+ G P+ + +L S ++ G K + + + I +VD+
Sbjct: 400 FDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLG 459
Query: 426 KCGRLNDARKVFDHL 440
+ GR+ +A ++ +++
Sbjct: 460 RAGRVEEAFQLVENM 474
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 175/354 (49%), Gaps = 8/354 (2%)
Query: 5 GFHPNVITYNHLLLMYV-KFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
G +V N LL MY + ++DA +F+++P + +SW+ LI+GF+ G L
Sbjct: 139 GIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLA 198
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
FR M+ + PN +++ A ACAS GK+IH + + GL ++ V N +++MY +
Sbjct: 199 FRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCR 258
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
C L A+ F E+N I+W +L++ Y + + L +F G + F+ S+
Sbjct: 259 CNYLCDAKRCFGELTEKNLITWNTLIAGY-ERSDSSESLSLFFQMGSEGYKPNCFTFTSI 317
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM--GLINLYAKCEKLDLASRVFSNIQLP 241
ACA L L G Q+H + + FDK VA+ LI++YAKC + + ++F ++
Sbjct: 318 TAACANLAVLSCGQQVHGGIVRRG--FDKNVALINSLIDMYAKCGSISDSHKLFCDMPGR 375
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG-RQL 300
DL +W+ ++ GY G EA+ LF +M SG+ P + F VL + G +
Sbjct: 376 DLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYF 435
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
S++ + + V+D + +EE+ + + M E D W AL+
Sbjct: 436 RSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGA 489
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 4/245 (1%)
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ N + ++ K L E+ F+E+ E DVV+W A+I G + HY +A + +ML
Sbjct: 45 WATNLIKSYFDK-GLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRS 103
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY-AKCGRLND 432
PN +T S++L + A+ G H K G D +V + +AL+DMY A C ++D
Sbjct: 104 EVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDD 163
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A VF+ + K VSW T++ G+ G G L + M + PN +F AC
Sbjct: 164 ALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACAS 223
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
I G ++ + +G+ + S++ ++ CR + E N + W
Sbjct: 224 ISSYSCG-KQIHAAVTKYGLHCDAPVMNSILDMY-CRCNYLCDAKRCFGELTEKNLITWN 281
Query: 553 CLLSG 557
L++G
Sbjct: 282 TLIAG 286
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF NV N L+ MY K I+D+ KLF +MP R+++SW+ ++ G+ G + A
Sbjct: 337 IVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEA 396
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLE-----LNSHVSN 115
+ F MV ++P+ ++G + C+ G G + +RS LE + +
Sbjct: 397 VKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGL----KYFRSMLEDYNINPDQEIYR 452
Query: 116 CLINMYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
C++++ G+ G + A Q V + E + W +LL +
Sbjct: 453 CVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGA 489
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 193/644 (29%), Positives = 332/644 (51%), Gaps = 49/644 (7%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G N+ N LL MY K I DA + F ++PE N +S++A++ G + A
Sbjct: 135 IKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAF 194
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRG----------DARS----GKEIHGRMYRSGL 107
FRLM+ + + + + C+ G D S G+++H + G
Sbjct: 195 RLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGF 254
Query: 108 ELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLL 167
E + H++N L++MY K G + SA+ +F E + +SW +++ Y Q + ++
Sbjct: 255 ESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQR 314
Query: 168 SRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK 227
+ G E + ++L AC G+++ G Q+
Sbjct: 315 MQYHGFEPDEITYVNMLVACIKSGDIEAGRQM---------------------------- 346
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
F + P L++W+ ++ GY+Q EA+ LF +M + P T + +L +
Sbjct: 347 -------FDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSS 399
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
A + GGRQ+H++ K F + ++A+ ++ YSKC +E + + FD + E D+V W
Sbjct: 400 LAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCW 459
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
N+++AG + EA K M +G P+ ++Y+ +L+ + + ++ G+Q H I +
Sbjct: 460 NSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAR 519
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
G+ ++ +GSAL+DMY+KCG ++ AR VFD + KN V+WN M+ GYAQ+G G EA+ +
Sbjct: 520 EGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLL 579
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA 527
Y M + KP+ TF+ VL+AC H GLV+ G FNSM ++HG+ P +DH ++
Sbjct: 580 YEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLG 639
Query: 528 CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIM 587
G+ A I P + + ++W LLS C+ + D+ L R AAE++ DP++++ +++
Sbjct: 640 RAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVL 699
Query: 588 LSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
L+N+Y+ WD+ VR++M + KD G SW E +N M F
Sbjct: 700 LANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAF 743
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 238/515 (46%), Gaps = 78/515 (15%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
++ T+N +L Y K S + DA LF EMPERN++SW+ LIS ++ G
Sbjct: 70 DIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNG------------- 116
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
AC + D G+ HG + GL+ N +V N L+ MY KC +
Sbjct: 117 ----------------ACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIG 160
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A F E N +S+ +++ + ++F L ++ + + S +SVLG C+
Sbjct: 161 DAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCS 220
Query: 189 --------------VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
VL + G Q+H L K E D + L+++YAK +D A +
Sbjct: 221 RGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMI 280
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F N+ + +W+ +I GY Q ++ +AI+ +M G P E+T+ +L A +
Sbjct: 281 FVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDI 340
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
GRQ+ + SS+ NT+L YS+ E
Sbjct: 341 EAGRQMFDGMSSPSLSSW----NTILSGYSQNE--------------------------- 369
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
++ EA++L ++M F P+ T + IL+ + + +E G+Q H K F +++
Sbjct: 370 ----NHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDI 425
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ S L+ MY+KCG++ A+++FD ++ ++V WN+M+ G + + L +EA + M+E
Sbjct: 426 YLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREK 485
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
+ P+ ++ VLS C + + +G + + R+
Sbjct: 486 GMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIARE 520
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 211/439 (48%), Gaps = 52/439 (11%)
Query: 78 TYVGAV-SACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
TY+ ++ C + +GK IH M RS L ++ +SN LI Y KC + +++ +FD
Sbjct: 6 TYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQ 65
Query: 137 SLERNSISWVSLLSSYCQCG--EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
+R+ +W ++L +YC+ E H L + R + S + GAC L +++
Sbjct: 66 MPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVE 125
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G + H + K L+ + +V L+ +YAKC + A + F ++ P+ +++A++GG A
Sbjct: 126 CGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLA 185
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD--------------VKETIGGRQL 300
+ EA LF M + + V+ S VLG + + + G+Q+
Sbjct: 186 DSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQV 245
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L IK GF S + N++LD Y+K ++ + F M E VVSWN +IAG+
Sbjct: 246 HCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQS 305
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+AIE L+ M + G P+ TY N+L CI
Sbjct: 306 SKAIEYLQRMQYHGFEPDEITYVNMLV---------------ACI--------------- 335
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
K G + R++FD +SS +L SWNT+L GY+Q+ +EA++++ MQ + P+
Sbjct: 336 -----KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDR 390
Query: 481 NTFIGVLSACVHIGLVEEG 499
T +LS+ + L+E G
Sbjct: 391 TTLAIILSSLAGMMLLEGG 409
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 200/398 (50%), Gaps = 30/398 (7%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L C G IH+ + + L D F++ LI YAKC +D + R+F +
Sbjct: 9 ASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPK 68
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKM-----FSSGLMPSEVTFSYVLGAFADVKETI 295
D+ W+A++G Y + + +A LF +M S + S +T + GA DV+
Sbjct: 69 RDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVE--- 125
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
GR+ H + IK+G + +V N +L Y+KC + ++++ F ++ E + VS+ A++ G
Sbjct: 126 CGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLA 185
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI-------------SSDIPAIE-WGKQT 401
S EA L + ML + + S++L + S+D+ + + G+Q
Sbjct: 186 DSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQV 245
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
HC +K GF+S++ + ++L+DMYAK G ++ A +F ++ ++VSWN M+ GY Q
Sbjct: 246 HCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQS 305
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
+A+E MQ + +P++ T++ +L AC+ G +E G F+ M SP + +
Sbjct: 306 SKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGM-----SSPSLSSWNT 360
Query: 522 VVHLFACRGQTRRAYEFIKS---SPIEPNKVVWRCLLS 556
++ ++ + A + + + P++ +LS
Sbjct: 361 ILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILS 398
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 180/396 (45%), Gaps = 61/396 (15%)
Query: 275 MPSEVTF-SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
M ++ T+ + +L D K + G+ +H+ +++ S TF++N +++FY+KC ++ S
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
+ FD+M + D+ +WNA++ + + +A L +M N+ +++ +++ +
Sbjct: 61 RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPER----NIVSWNTLISALTRNG 116
Query: 394 A------IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
A +E G++ H +K G D+N+ +G+AL+ MYAKC + DA + F + N VS
Sbjct: 117 ACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVS 176
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
+ M+ G A EA ++ +M N+I + + VL C G E G H N ++
Sbjct: 177 FTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVL 236
Query: 508 RD-------------HGISPRMDHIASVVHLFACRG------------------------ 530
HG + S++ ++A G
Sbjct: 237 SSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMI 296
Query: 531 -------QTRRAYEFIKSSP---IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE 580
Q+ +A E+++ EP+++ + +L C D+ GR + + S P
Sbjct: 297 AGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSS--PS 354
Query: 581 DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
+S + +LS Y++ E K+ + M+ +S+ D
Sbjct: 355 LSSWNTILSG-YSQNENHKEAVKLFREMQFRSVHPD 389
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 212/662 (32%), Positives = 347/662 (52%), Gaps = 7/662 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF +V N L+ MY R+ DA K+F M ++ +SW+A+ISG+ + G P+ AL
Sbjct: 325 VKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKAL 384
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ LM + P+ T A++ACA G G ++H G V+N L+ MY
Sbjct: 385 EVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMY 444
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K + A VF E++ +SW S+++ +C L F V + +
Sbjct: 445 AKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFI 503
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ L ACA G L+ G +IH+ V +C + + +V L++LY KC + A FS
Sbjct: 504 AALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEK 563
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W+ ++ G+ G A+ LF +M + L + L A A + G +LH
Sbjct: 564 DVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACSALAACACLGRLDVGIKLH 621
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
L GF + VAN +L+ Y+K + ++++++ F M E DVVSW+++IAG +
Sbjct: 622 ELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSF 681
Query: 362 EAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A+ + ML GH PN T+ L+ + A+ GK+ H +++ G S + +AL
Sbjct: 682 DALYYFRYML--GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNAL 739
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+D+Y KCG+ + A F S K++VSWN ML G+ HGLG AL +++ M E P++
Sbjct: 740 LDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDE 799
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ ++ AC G+V +GW F+ I P + H A +V L + G+ AY I
Sbjct: 800 VTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLIN 858
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
PI+P+ VW LL+GC+ H+ + LG AA+ IL +P D + H++L ++Y +A W +
Sbjct: 859 RMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQ 918
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
A+VRK M+EK L++D GCSW E++ H F T + Q +++ V++ + + G+
Sbjct: 919 VARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGF 978
Query: 661 VP 662
P
Sbjct: 979 AP 980
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 246/459 (53%), Gaps = 3/459 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N +L M V+F I A ++F +MPER+V SW+ ++ G+ ++G E AL+ + M+ +
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT+ + C D R G+E+H + R G V N L+ MY KCG + +A+ V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD + ISW ++++ + + E GL++FL ++ V + + SV A +L +
Sbjct: 255 FDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++H K D LI +Y ++ A ++FS ++ D +W+A+I GY
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G +A++++ M + P +VT + L A A + G +LH L GF +
Sbjct: 375 EKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
VAN +L+ Y+K + ++++++ F M E DVVSW+++IAG + +A+ + ML
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML-- 492
Query: 374 GHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
GH PN T+ L+ + A+ GK+ H +++ G S + +AL+D+Y KCG+ +
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
A F S K++VSWN ML G+ HGLG AL +++ M
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQM 591
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 169/586 (28%), Positives = 279/586 (47%), Gaps = 10/586 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF V N L+ MY K I A+K+FD M + ISW+A+I+G + E L F
Sbjct: 227 GFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELF 286
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ ++PN T A + KE+HG + G ++ N LI MY
Sbjct: 287 LTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSL 346
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A +F ++++SW +++S Y + G L+++ L V + + AS L
Sbjct: 347 GRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASAL 406
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA LG L VG+++H L VA L+ +YAK + +D A VF + D+
Sbjct: 407 AACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVV 466
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+WS++I G+ ++ +A+ F M + P+ VTF L A A G+++H+ +
Sbjct: 467 SWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYV 525
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
++ G S +V N +LD Y KC + F E DVVSWN +++G +A A+
Sbjct: 526 LRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIAL 585
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
L M++ + L + + ++ G + H GF VV+ +AL++MY
Sbjct: 586 SLFNQMMYTS--LGRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMY 643
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AK ++ A +VF ++ K++VSW++M+ G+ + +AL + M +KPN TFI
Sbjct: 644 AKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML-GHVKPNSVTFI 702
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY-EFIKSSP 543
LSAC G + G ++R GI +++ L+ GQT A+ +F S
Sbjct: 703 AALSACAATGALRSGKEIHAYVLR-CGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHS- 760
Query: 544 IEPNKVVWRCLLSGCKTH--KDLVLGRYAAEKILSTDPEDTSAHIM 587
E + V W +LSG H D+ L + + P++ + +M
Sbjct: 761 -EKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVLM 805
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 232/490 (47%), Gaps = 7/490 (1%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YV C R +G R + N +++M + G + A V
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F ER+ SW ++ Y + G L ++ +G+ ++ VL C + +
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++G ++H+ V + + V L+ +YAKC + A +VF + + D +W+A+I G+
Sbjct: 214 RMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGH 273
Query: 254 AQLGKACEA-IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
+ CEA ++LF+ M + + P+ +T + V A + E +++H +K GF+
Sbjct: 274 FE-NHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID 332
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
N+++ Y+ + ++ K F M+ D +SW A+I+G+ + +A+E+ M
Sbjct: 333 VAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMEL 392
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
P+ T ++ L + + ++ G + H GF VV+ +AL++MYAK ++
Sbjct: 393 HNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDK 452
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A +VF ++ K++VSW++M+ G+ + +AL + M +KPN TFI LSAC
Sbjct: 453 AIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML-GHVKPNSVTFIAALSACAA 511
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY-EFIKSSPIEPNKVVW 551
G + G ++R GI +++ L+ GQT A+ +F S E + V W
Sbjct: 512 TGALRSGKEIHAYVLR-CGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHS--EKDVVSW 568
Query: 552 RCLLSGCKTH 561
+LSG H
Sbjct: 569 NIMLSGFVAH 578
>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 200/627 (31%), Positives = 341/627 (54%), Gaps = 14/627 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKF-SRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV 59
++ G + L+ MY+K + DA ++F + ER+V++W+ +ISGF+Q G +
Sbjct: 175 LVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRM 234
Query: 60 ALNYFRLM-VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
F M L+P+ T+ + C+ + +IHG +Y+ G E++ V + ++
Sbjct: 235 VQRLFSEMWEEQGLKPDRITFASLLKCCSVLNEVM---QIHGIVYKFGAEVDVVVESAMV 291
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
++Y KC +SS + +FD+ ++++ W S++S Y + F + V + +
Sbjct: 292 DLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQH 351
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+S L AC + +L G+Q+H L+ K + D FVA L+NLYA +L ++FS I
Sbjct: 352 VLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRI 411
Query: 239 QLPDLTAWSALIGGYAQLGKAC-EAIDLFVKMFSSGLMPSE-VTFSYVLGAFADVKETIG 296
D+ AW+++I A+ G+ C + LF ++ + + + T VL + +
Sbjct: 412 DDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPA 471
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
GRQ+HSLI+K T V N ++ YS+C+ ++++ K F ++ D SW+++I
Sbjct: 472 GRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQ 531
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS--SDIPAIEWGKQTHCCIVKPGFDSNV 414
+ +A+EL K+ML EG N +YS L IS S + I GKQ H +K G+ +V
Sbjct: 532 NRMESKALELCKEMLDEG--INFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDV 589
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
IGS+++DMYAKCG + ++ KVFD N V++N ++ GYA HG ++A+E+ S +++N
Sbjct: 590 YIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKN 649
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
+ PN TF+ ++SAC H G VEE H F M+ + I P+ +H + +V + G+
Sbjct: 650 GVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEE 709
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
AY+ ++ E WR LLS C+ H + +G +A K++ +P D + +I+LSN+Y E
Sbjct: 710 AYQIVQKDGSES---AWRTLLSACRNHSNRKIGEKSAMKMIELNPSDHAPYILLSNIYIE 766
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSW 621
W+E RK M + +KKD G SW
Sbjct: 767 EGNWEEALNCRKKMAKIRVKKDPGNSW 793
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/558 (29%), Positives = 274/558 (49%), Gaps = 21/558 (3%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL Y K S + A KLFD+MP RNV++W+ LIS + G A F M
Sbjct: 87 NTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDER 146
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG-LLSSAQF 132
PN T+ + AC +R G +IHG + R GLE + L+ MY K G L A
Sbjct: 147 PNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALR 206
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLG 191
VF LER+ ++W ++S + Q G+ ++F + + G+ + AS+L C+VL
Sbjct: 207 VFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCSVLN 266
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+ MQIH +V+K E D V +++LYAKC + ++F +++ D WS++I
Sbjct: 267 EV---MQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMIS 323
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
GY + EA++ F M + + S L A ++++ G Q+H L+IK G +
Sbjct: 324 GYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQN 383
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI------- 364
FVA+ +L+ Y+ L + K F +D+ D+V+WN++I LA G+
Sbjct: 384 DCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMI---LAQARPGQGCGRCMQLF 440
Query: 365 -ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
EL + + L SD+PA G+Q H IVK + ++G+ALV M
Sbjct: 441 QELRRTTFLQIQGATLVAVLKSCEKDSDLPA---GRQIHSLIVKSSLCRHTLVGNALVHM 497
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y++C +++DA K F + K+ SW++++ Q+ + +ALE+ M + I +
Sbjct: 498 YSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSL 557
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+SAC + + EG I+ G S + +S++ ++A G + E +
Sbjct: 558 PLCISACSQLLTISEGKQLHVFAIKS-GYSCDVYIGSSIIDMYAKCGNIEES-EKVFDEQ 615
Query: 544 IEPNKVVWRCLLSGCKTH 561
++PN+V + ++SG H
Sbjct: 616 LKPNEVTFNAIISGYAHH 633
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 233/471 (49%), Gaps = 11/471 (2%)
Query: 97 EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
+IH ++ + +H++N L++ Y K A +FD RN ++W +L+SS+ + G
Sbjct: 69 QIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYG 128
Query: 157 EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
++F R S +E + A +L AC VG+QIH L+ +C LE +KF
Sbjct: 129 SVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGS 188
Query: 217 GLINLYAK-CEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF-SSGL 274
L+ +Y K + L A RVF + D+ AW+ +I G+AQ G LF +M+ GL
Sbjct: 189 SLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGL 248
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
P +TF+ +L + + E + Q+H ++ K G V + ++D Y+KC + K
Sbjct: 249 KPDRITFASLLKCCSVLNEVM---QIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRK 305
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
FD M++ D W+++I+G+ + EA+ KDM + + + S+ L +I
Sbjct: 306 IFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIED 365
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
+ G Q H ++K G ++ + S L+++YA G L D K+F + K++V+WN+M++
Sbjct: 366 LNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILA 425
Query: 455 YAQHGLG-REALEIYSMMQENK-IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
A+ G G ++++ ++ ++ T + VL +C + G +S+I +
Sbjct: 426 QARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAG-RQIHSLIVKSSL 484
Query: 513 SPRMDHIASVVHLFACRGQTRRAYE-FIKSSPIEPNKVVWRCLLSGCKTHK 562
++VH+++ Q A++ F+ + + W ++ CK ++
Sbjct: 485 CRHTLVGNALVHMYSECKQIDDAFKAFV--DIVRKDDSSWSSIIGTCKQNR 533
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 221/677 (32%), Positives = 346/677 (51%), Gaps = 26/677 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G V N L+ M+ IN+A +F+EM ER+ ISW+++IS +Q + E + YF
Sbjct: 190 GLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYF 249
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M E NY T +S C S + GK +HG + GLE N + N L+++Y
Sbjct: 250 HWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDA 309
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G A+ +F ER+ ISW S+L+ Y Q G + LK+F I+ + S L
Sbjct: 310 GRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSAL 369
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC G +H V L+ + + LI Y KC K+ A +VF + D
Sbjct: 370 AACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKV 429
Query: 245 AWSALIGGYA---QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQL 300
W+ALIGG+A +L +A A L + +SG+ +T +LG+ ++ I G +
Sbjct: 430 TWNALIGGFANNAELNEAVAAFKLMREGSTSGV--DYITIVNILGSCLTHEDLIKYGIPI 487
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ + GF V ++++ Y+KC L S FD++ WNA+IA A+ Y
Sbjct: 488 HAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIA---ANARY 544
Query: 361 G---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
G EA++L+ M G + + +S L++++D+ +E G+Q H +K GF+ + I
Sbjct: 545 GFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFII 604
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+A +DMY KCG L+DA ++ + ++ +SWNT++ A+HG +A E + M + +K
Sbjct: 605 NAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVK 664
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
PN +F+ +LSAC H GLV+EG Y+ SM +GI P ++H ++ L G+ A
Sbjct: 665 PNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEA 724
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FI PI PN +VWR LL+ C+ +++L LGR AA+ +L DP D SA+++ SNV+A
Sbjct: 725 FITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGR 784
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF- 656
W++ VR M ++K SW + + + F G H M Q++ L
Sbjct: 785 WEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFG-------MGDQTHPQMEQINGKLLG 837
Query: 657 ------DGGYVPDPIYS 667
+ GYVPD YS
Sbjct: 838 LMKIVGEAGYVPDTSYS 854
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 162/570 (28%), Positives = 276/570 (48%), Gaps = 20/570 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G +V + Y + +++AQK+F+EMP+RNV+SW++L+ +S G + +
Sbjct: 86 IKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVI 145
Query: 62 NYFRLM----VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
N ++ M +CC N +S+C D G ++ G + GLE +N L
Sbjct: 146 NTYKRMRHEGICC----NENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSL 201
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
I M+G CG ++ A +F+ ER++ISW S++S+ Q H + F R I+
Sbjct: 202 IFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINY 261
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ + +L C + LK G +H L K LE + + L+++Y+ + A +F
Sbjct: 262 TTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRR 321
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ DL +W++++ Y Q G+ A+ +F +M + VTF+ L A D + G
Sbjct: 322 MPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNG 381
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+ LH ++ +G + NT++ FY KC + E+ K F M + D V+WNALI G +
Sbjct: 382 KILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANN 441
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI----PAIEWGKQTHCCIVKPGFDSN 413
EA+ K ++ EG + Y I+NI I++G H V GFD +
Sbjct: 442 AELNEAVAAFK-LMREGSTSGV-DYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLD 499
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ S+L+ MYAKCG L+ + +FD L K WN ++ A++G G EAL++ M+
Sbjct: 500 QHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRS 559
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH--IASVVHLFACRGQ 531
I+ + F LS + ++EEG S I+ + +DH I + + ++ G+
Sbjct: 560 AGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIK---LGFELDHFIINAAMDMYGKCGE 616
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
A I P + +++ W L+S H
Sbjct: 617 LDDALR-ILPQPTDRSRLSWNTLISISARH 645
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 240/484 (49%), Gaps = 3/484 (0%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY KF RIN AQ +FD M ERN SW+ ++SG+ ++G A+ +FR + ++P+ +
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 79 YVGAVSAC-ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
V+AC S A+ G + HG + GL + V ++ Y G++S+AQ +F+
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+RN +SW SL+ SY G + + R G+ +E + A V+ +C L ++ +G
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+ K LE A LI ++ C ++ A +F+ + D +W+++I AQ
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
E+ F M + T S +L V G+ +H L +K G S + N
Sbjct: 241 LHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCN 300
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
T+L YS +++ F M E D++SWN+++A ++ A+++ +ML+
Sbjct: 301 TLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEI 360
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
N T+++ L D GK H +V G ++IG+ L+ Y KC ++ +A+KVF
Sbjct: 361 NYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVF 420
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN-TFIGVLSACV-HIGL 495
+ + V+WN ++ G+A + EA+ + +M+E D T + +L +C+ H L
Sbjct: 421 QRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDL 480
Query: 496 VEEG 499
++ G
Sbjct: 481 IKYG 484
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 216/446 (48%), Gaps = 3/446 (0%)
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY K G ++ AQ VFD ERN SW ++S Y + G +V + F G+ S F
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 180 CASVLGACAVLGNL-KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
AS++ AC + K G Q H KC L +D FV ++ YA + A ++F+ +
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
++ +W++L+ Y+ G E I+ + +M G+ +E + V+ + + + I G
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
QL +K G + AN+++ + C + E+ F+EM+E D +SWN++I+ + +
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ E+ M N T S +L+I + ++WGK H VK G +SN+ + +
Sbjct: 241 LHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCN 300
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+ +Y+ GR DA +F + ++L+SWN+ML Y Q G AL++++ M K +
Sbjct: 301 TLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEI 360
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N TF L+AC+ G + + G+ + +++ + + A +
Sbjct: 361 NYVTFTSALAACLDPEFFTNG-KILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKV 419
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDL 564
+ P + +KV W L+ G + +L
Sbjct: 420 FQRMP-KLDKVTWNALIGGFANNAEL 444
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +I N L+ Y K ++ +A+K+F MP+ + ++W+ALI GF+ A
Sbjct: 388 VVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEA 447
Query: 61 LNYFRLMV-CCVLEPNYYTYVGAVSACASRGD-ARSGKEIHGRMYRSGLELNSHVSNCLI 118
+ F+LM +Y T V + +C + D + G IH +G +L+ HV + LI
Sbjct: 448 VAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLI 507
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY KCG L S+ ++FD + + S W +++++ + G LK+ + R +G+ +F
Sbjct: 508 TMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQF 567
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ ++ L A L L+ G Q+H K E D F+ +++Y KC +LD A R+
Sbjct: 568 NFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQP 627
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+W+ LI A+ G+ +A + F M G+ P+ V+F +L A
Sbjct: 628 TDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSA 676
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 119/255 (46%), Gaps = 8/255 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF + + L+ MY K ++ + +FD++ + W+A+I+ ++ G E AL
Sbjct: 492 VVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEAL 551
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
M +E + + + A+S A G+++HG + G EL+ + N ++MY
Sbjct: 552 KLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMY 611
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
GKCG L A + +R+ +SW +L+S + G+ + F K GV + S
Sbjct: 612 GKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFV 671
Query: 182 SVLGACAVLGNLKVGMQIH---SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+L AC+ G + G+ + + V+ + V M I+L + +L A + +
Sbjct: 672 CLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCM--IDLLGRSGRLVEAEAFITEM 729
Query: 239 QLP--DLTAWSALIG 251
+P DL W +L+
Sbjct: 730 PIPPNDLV-WRSLLA 743
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF + N + MY K ++DA ++ + +R+ +SW+ LIS ++ G A
Sbjct: 593 IKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAK 652
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
F M+ ++PN+ ++V +SAC+ G G + M G++ C+I++
Sbjct: 653 ETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDL 712
Query: 121 YGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
G+ G L A+ F+ + + N + W SLL+S
Sbjct: 713 LGRSGRLVEAEAFITEMPIPPNDLVWRSLLAS 744
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 196/670 (29%), Positives = 350/670 (52%), Gaps = 11/670 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G N++ L+ +YV I+ ++ FD + ++N+ SW+++IS + + G A
Sbjct: 45 LLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEA 104
Query: 61 LNYF-RLMVCCV---LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
+N +L C L P++YT+ + AC S D GK++H +++ G E + V+
Sbjct: 105 MNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAAS 161
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
L+++Y + G+L A VF ++ SW +++S +CQ G L + + GV +
Sbjct: 162 LVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMD 221
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+ AS+L CA ++ G+ IH V K L+ D FV+ LIN+Y+K +L A VF
Sbjct: 222 TITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFD 281
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+++ DL +W+++I Y Q A+ F M G+ P +T + F+ + +
Sbjct: 282 QMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRI 341
Query: 297 GRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
R + +I+ + N +++ Y+K + + FD++ D +SWN L+ G+
Sbjct: 342 SRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYT 401
Query: 356 ASCHYGEAIELLKDMLFE--GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ EAI+ +M+ E PN T+ +I+ S + A++ G + H ++K +
Sbjct: 402 QNGLASEAIDAY-NMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLD 460
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V + + L+D+Y KCGRL DA +F + V WN ++ HG G EAL+++ M
Sbjct: 461 VFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLA 520
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
++K + TF+ +LSAC H GLV+EG F+ M +++GI P + H +V L G
Sbjct: 521 ERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLE 580
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
+AYE +++ PI+P+ +W LLS CK + + LG A++++L D E+ +++LSN+YA
Sbjct: 581 KAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYA 640
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W+ KVR + +++ L+K G S + +K F T + ++++ + LS
Sbjct: 641 NTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSA 700
Query: 654 HLFDGGYVPD 663
+ GYVPD
Sbjct: 701 KMKSLGYVPD 710
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 158/551 (28%), Positives = 279/551 (50%), Gaps = 38/551 (6%)
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
+ + K++H + G N +S LIN+Y G +S ++ FD ++N SW S++S
Sbjct: 34 NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIIS 93
Query: 151 SYCQCGEHVHGL----KIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+Y + G++ + ++F + + ++ +L AC L + G ++H VFK
Sbjct: 94 AYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKM 150
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
E D FVA L++LY++ LD+A +VF ++ + D+ +W+A+I G+ Q G A A+ +
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVL 210
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
+M G+ +T + +L A + I G +H ++K G S FV+N +++ YSK
Sbjct: 211 NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKF 270
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
L+++ FD+M+ D+VSWN++IA + + A+ K M G P+L T ++
Sbjct: 271 GRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLT 330
Query: 387 NISSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
+I S + + +++ D +VVIG+ALV+MYAK G +N A VFD L K+
Sbjct: 331 SIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDT 390
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQE-NKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
+SWNT++ GY Q+GL EA++ Y+MM+E PN T++ ++ A H+G +++G
Sbjct: 391 ISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450
Query: 505 SMIRDHGISPRMDHIAS--VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH- 561
+I++ S +D + ++ L+ G+ A P + V W +++ H
Sbjct: 451 KLIKN---SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRD-TSVPWNAIIASLGIHG 506
Query: 562 ---------KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM-KEK 611
KD++ R A+ I + L + + + + DE K IM KE
Sbjct: 507 RGEEALQLFKDMLAERVKADHI---------TFVSLLSACSHSGLVDEGQKCFDIMQKEY 557
Query: 612 SLK---KDTGC 619
+K K GC
Sbjct: 558 GIKPSLKHYGC 568
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 196/670 (29%), Positives = 351/670 (52%), Gaps = 11/670 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G N++ L+ +YV I+ ++ FD + ++N+ SW+++IS + + G A
Sbjct: 45 LLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEA 104
Query: 61 LNYF-RLMVCCV---LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
+N +L C L P++YT+ + AC S D GK++H +++ G E + V+
Sbjct: 105 MNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAAS 161
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
L+++Y + G+L A VF ++ SW +++S +CQ G L + + GV +
Sbjct: 162 LVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMD 221
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+ AS+L CA ++ G+ IH V K L+ D FV+ LIN+Y+K +L A VF
Sbjct: 222 TITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFD 281
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+++ DL +W+++I Y Q A+ F M G+ P +T + F+ + +
Sbjct: 282 QMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRI 341
Query: 297 GRQLHSLIIKMGF-SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
R + +I+ + + N +++ Y+K + + FD++ D +SWN L+ G+
Sbjct: 342 SRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYT 401
Query: 356 ASCHYGEAIELLKDMLFE--GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ EAI+ +M+ E PN T+ +I+ S + A++ G + H ++K +
Sbjct: 402 QNGLASEAIDAY-NMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLD 460
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V + + L+D+Y KCGRL DA +F + V WN ++ HG G EAL+++ M
Sbjct: 461 VFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLA 520
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
++K + TF+ +LSAC H GLV+EG F+ M +++GI P + H +V L G
Sbjct: 521 ERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLE 580
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
+AYE +++ PI+P+ +W LLS CK + + LG A++++L D E+ +++LSN+YA
Sbjct: 581 KAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYA 640
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W+ KVR + +++ L+K G S + +K F T + ++++ + LS
Sbjct: 641 NTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSA 700
Query: 654 HLFDGGYVPD 663
+ GYVPD
Sbjct: 701 KMKSLGYVPD 710
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 158/551 (28%), Positives = 279/551 (50%), Gaps = 38/551 (6%)
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
+ + K++H + G N +S LIN+Y G +S ++ FD ++N SW S++S
Sbjct: 34 NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIIS 93
Query: 151 SYCQCGEHVHGL----KIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+Y + G++ + ++F + + ++ +L AC L + G ++H VFK
Sbjct: 94 AYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKM 150
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
E D FVA L++LY++ LD+A +VF ++ + D+ +W+A+I G+ Q G A A+ +
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVL 210
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
+M G+ +T + +L A + I G +H ++K G S FV+N +++ YSK
Sbjct: 211 NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKF 270
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
L+++ FD+M+ D+VSWN++IA + + A+ K M G P+L T ++
Sbjct: 271 GRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLT 330
Query: 387 NISSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
+I S + + +++ D +VVIG+ALV+MYAK G +N A VFD L K+
Sbjct: 331 SIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDT 390
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQE-NKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
+SWNT++ GY Q+GL EA++ Y+MM+E PN T++ ++ A H+G +++G
Sbjct: 391 ISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450
Query: 505 SMIRDHGISPRMDHIAS--VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH- 561
+I++ S +D + ++ L+ G+ A P + V W +++ H
Sbjct: 451 KLIKN---SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRD-TSVPWNAIIASLGIHG 506
Query: 562 ---------KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM-KEK 611
KD++ R A+ I + L + + + + DE K IM KE
Sbjct: 507 RGEEALQLFKDMLAERVKADHI---------TFVSLLSACSHSGLVDEGQKCFDIMQKEY 557
Query: 612 SLK---KDTGC 619
+K K GC
Sbjct: 558 GIKPSLKHYGC 568
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 183/597 (30%), Positives = 323/597 (54%), Gaps = 14/597 (2%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
YV + C G K +HG M ++G ++ V+ L+N+Y +CG A+ +FD
Sbjct: 81 YVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMP 140
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
E+N ++W +L++ Y + V L++F+ K G S+++ +L AC N+ +G Q
Sbjct: 141 EKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQ 200
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H K + L LY K L+ R F I ++ W+ +I A+
Sbjct: 201 VHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDEN 260
Query: 259 ACE-AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
E ++LF+ M +MP+E T + V+ + G+Q+ K+G ++ V N
Sbjct: 261 YTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKN 320
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG------------HLASCHYGEAIE 365
+ + Y + EE+++ F+EM+++ V++WNA+I+G H S + +A++
Sbjct: 321 STMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGF-QALK 379
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
+ +D++ P+L+T+S+IL++ S + A+E G+Q H +K GF S+VV+ SALV+MY
Sbjct: 380 IFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYN 439
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KCG + A K F + ++ LV+W +M+ GY+QHG +A++++ M KPN+ TF+
Sbjct: 440 KCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVS 499
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
+LSAC + GLVEE YF+ M ++ I P MDH ++ +F G+ AY FIK E
Sbjct: 500 LLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFE 559
Query: 546 PNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVR 605
PN+ +W L++GC++H ++ L YAA+++L P+ +++L N+Y W + A+VR
Sbjct: 560 PNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVR 619
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
K+ K + L SW +++K+++F + Q +L++++ L GY P
Sbjct: 620 KLSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTELYQLLETLLEKAKAIGYEP 676
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 255/517 (49%), Gaps = 33/517 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ +G ++ L+ +Y++ DA+ LFDEMPE+NV++W+ALI+G++ P +A
Sbjct: 104 MVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLA 163
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ P+ YT G +SAC + + GK++HG + G + + N L +
Sbjct: 164 LEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRL 223
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH-GLKIFLLSRKSGVAISEFS 179
Y K G L S F ++N I+W +++S+ + + GL +FL K V +EF+
Sbjct: 224 YTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFT 283
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV+ C ++ +G Q+ FK + V + LY + + + A R+F ++
Sbjct: 284 LTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEME 343
Query: 240 LPDLTAWSALIGGYAQL-----------GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
+ W+A+I G+AQ+ + +A+ +F + S + P TFS +L
Sbjct: 344 DNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVC 403
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ + G Q+H+ IK GF S V + +++ Y+KC +E + K F EM +V+W
Sbjct: 404 STMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWT 463
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI--- 405
++I+G+ +AI+L +DM+ G PN T+ ++L+ S +E + +
Sbjct: 464 SMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNE 523
Query: 406 --VKPGFDSNVVIGSALVDMYAKCGRLNDA-----RKVFDHLSSKNLVSWNTMLVGYAQH 458
++P D ++DM+ + GRL+DA RK F+ N W++++ G H
Sbjct: 524 YHIEPLMDHY----GCMIDMFVRLGRLDDAYAFIKRKGFE----PNEAIWSSLVAGCRSH 575
Query: 459 GLGREALEIYSMMQENKIKPN-DNTFIGVLSACVHIG 494
G L Y+ + ++KP T++ +L+ + G
Sbjct: 576 --GNMELAFYAADRLLELKPKVVETYVLLLNMYISTG 610
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 191/404 (47%), Gaps = 14/404 (3%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
K G ++ +L C G+L +H + K D FVA L+N+Y +C
Sbjct: 71 KEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQ 130
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A +F + ++ W+ALI GY + A+++FV+M G PS+ T +L A
Sbjct: 131 DARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACV 190
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
G+Q+H IK G +S T + N++ Y+K LE ++ F + + +V++W
Sbjct: 191 ASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTT 250
Query: 350 LIAGHLASCHYGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
+I+ +Y E + L DML PN +T ++++++ + GKQ K
Sbjct: 251 MISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKI 310
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ---------HG 459
G +N+ + ++ + +Y + G +A ++F+ + ++++WN M+ G+AQ H
Sbjct: 311 GCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHA 370
Query: 460 LGR--EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
R +AL+I+ + + +KP+ TF +LS C + +E+G I+ +S +
Sbjct: 371 RSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVV 430
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ +++V+++ G A + P V W ++SG H
Sbjct: 431 N-SALVNMYNKCGCIEYATKAFVEMPTR-TLVTWTSMISGYSQH 472
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
ML EG Y +L+ + ++ K H +VK G ++ + ++LV++Y +CG
Sbjct: 69 MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGN 128
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
DAR +FD + KN+V+W ++ GY + ALE++ M + P+D T G+LSA
Sbjct: 129 SQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSA 188
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
CV ++ G I+ +G + S+ L+ G K P + N +
Sbjct: 189 CVASHNIDLGKQVHGYTIK-YGAASITSIGNSLCRLYTKSGNLESGIRAFKRIP-DKNVI 246
Query: 550 VWRCLLSGC 558
W ++S C
Sbjct: 247 TWTTMISAC 255
>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 765
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 325/577 (56%), Gaps = 15/577 (2%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y + C S + IH + ++G + +S+ L+ +Y KCG + AQ VFD
Sbjct: 76 YPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMN 135
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
RN+++W +L+ Y Q H + +F + S S ++ A L AC L +LK+G
Sbjct: 136 RRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKLGE 195
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCE-KLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
Q+H+ + K ++FD + L +LY KC KL++ F I+ D+ +W+A I +
Sbjct: 196 QLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACGEK 255
Query: 257 GKACEAIDLFVKMF--SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
G+A + + +FV+M + P+E T + L +VK G Q+H+L K+G+ S
Sbjct: 256 GEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLR 315
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH----------LASCHYG-EA 363
V N++L Y KC + E+ + F M++ ++V+WNA+IAGH L++ G EA
Sbjct: 316 VRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEA 375
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ L + G P+ +T+S++L++ S + A+E G+Q H +K GF S+VV+GS++++M
Sbjct: 376 LNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINM 435
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y KCG + A KVF +S + ++ W TM+ G+AQHG ++AL ++ M+ I+PN TF
Sbjct: 436 YNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTF 495
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+GVLSAC G+V E ++YF M +++ I P MDH +V + GQ + A++ IK
Sbjct: 496 VGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMD 555
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
+ ++ +W L+ GC + +L LG AAEK+LS P+DT + +L N Y A +D+ ++
Sbjct: 556 YKASEFIWSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSR 615
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQ 640
V IM+E+ + + SW ++++++ F T+ A +
Sbjct: 616 VENIMREEKIGELKDWSWISIKDRVYSFQTNDKADIE 652
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 150/523 (28%), Positives = 263/523 (50%), Gaps = 42/523 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G H + + L+ +Y K R+ AQ++FD M RN ++W+ L+ G+ Q MP+ A
Sbjct: 99 IVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHA 158
Query: 61 LNYFRLMVC---CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
++ F M+ C P+ YT A++AC S + G+++H + + ++ ++ + N L
Sbjct: 159 IHLFEEMLLHSECY--PSNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNAL 216
Query: 118 INMYGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVA 174
++Y KC G L F E++ ISW + +S+ + GE + G+++F +L + V
Sbjct: 217 CSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQ 276
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+E++ S L C + L++G+Q+H+L K E + V L+ LY KC + A R+
Sbjct: 277 PNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRL 336
Query: 235 FSNIQLPDLTAWSALIGGYAQL-----------GKACEAIDLFVKMFSSGLMPSEVTFSY 283
F + +L W+A+I G+AQ+ K EA++LF K+ SG+ P TFS
Sbjct: 337 FKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSS 396
Query: 284 VLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHD 343
VL + + G Q+H+ IK GF S V +++++ Y+KC +E + K F EM
Sbjct: 397 VLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRT 456
Query: 344 VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN-------ISSDIPAIE 396
++ W +I G +A+ L +DM G PNL T+ +L+ ++ E
Sbjct: 457 MILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFE 516
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGY 455
++ + +KP D V LVDM + G++ +A + + K + W+ ++VG
Sbjct: 517 IMQKEY--KIKPVMDHYV----CLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGC 570
Query: 456 AQHG---LGREALEIYSMMQENKIKPNDN-TFIGVLSACVHIG 494
G LG +A E + +KP D T+ +L+A V G
Sbjct: 571 LSQGNLELGCDAAE-----KLLSLKPKDTETYKLLLNAYVSAG 608
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 198/412 (48%), Gaps = 17/412 (4%)
Query: 165 FLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK 224
F L+++S + +L C + IH + K D F++ L+ +YAK
Sbjct: 61 FSLAKESNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAK 120
Query: 225 CEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSY 283
C +++ A +VF ++ + AW+ L+ GY Q AI LF +M S PS T +
Sbjct: 121 CGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAI 180
Query: 284 VLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC-ELLEESLKTFDEMDEH 342
L A + G QLH+ IIK T + N + Y+KC LE L F + E
Sbjct: 181 ALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEK 240
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFE--GHCPNLYTYSNILNISSDIPAIEWGKQ 400
DV+SW A I+ + + + +ML + PN YT ++ L+ ++ +E G Q
Sbjct: 241 DVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQ 300
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ--- 457
H K G++SN+ + ++L+ +Y KCG + +A+++F ++ NLV+WN M+ G+AQ
Sbjct: 301 VHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMME 360
Query: 458 --------HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
+ G EAL ++S + + +KP+ TF VLS C + +E+G I+
Sbjct: 361 LSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKT 420
Query: 510 HGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+S + +S+++++ G RA + I ++W +++G H
Sbjct: 421 GFLSDVVVG-SSMINMYNKCGSIERASKVFLEMSIR-TMILWTTMITGFAQH 470
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 202/688 (29%), Positives = 333/688 (48%), Gaps = 73/688 (10%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M++ GF N +L M++K R++ A++ F+E+ ++V W+ ++SG++ G + A
Sbjct: 216 MLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKA 275
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M ++P+ T+ +S A G + M GL+
Sbjct: 276 LKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEM--GGLK------------ 321
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ N +SW +L++ Q G L +F GV + +
Sbjct: 322 ----------------DFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITI 365
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
AS + AC L L+ G +IH K L+ D V L++ YAKC +++A R F I+
Sbjct: 366 ASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIK 425
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDL---------------------------------- 265
DL +W+A++ GYA G EAI+L
Sbjct: 426 QTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALE 485
Query: 266 -FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
F +M S G+ P+ T S L A V+ G+++H +++ T V + ++ YS
Sbjct: 486 FFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYS 545
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
C+ LE + F E+ DVV WN++I+ S A++LL++M N T +
Sbjct: 546 GCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVS 605
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
L S + A+ GK+ H I++ G D+ I ++L+DMY +CG + +R++FD + ++
Sbjct: 606 ALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRD 665
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
LVSWN M+ Y HG G +A+ ++ + +KPN TF +LSAC H GL+EEGW YF
Sbjct: 666 LVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFK 725
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
M ++ + P ++ A +V L + GQ EFI+ P EPN VW LL C+ H +
Sbjct: 726 MMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNP 785
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
L YAA + +P+ + +++++N+Y+ A W++ AK+R +MKE+ + K GCSW E+
Sbjct: 786 DLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEV 845
Query: 625 QNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
+ K+H F G H +M Q+S
Sbjct: 846 KRKLHSFVV-------GDTSHPLMEQIS 866
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 166/661 (25%), Positives = 308/661 (46%), Gaps = 105/661 (15%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
+ LL +Y + + DA+++FD+M ERNV SW+A++ + +G E + F LMV +
Sbjct: 128 SRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVR 187
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+++ + AC+ + R GK+++ M G E NS V +++M+ KCG + A+
Sbjct: 188 PDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRF 247
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ ++ W ++S Y GE LK + SGV + + +++ A G
Sbjct: 248 FEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQ- 306
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
F+ A ++ F+ MG + + P++ +W+ALI G
Sbjct: 307 ----------FEEASKY--FLEMGGLKDFK-----------------PNVVSWTALIAGS 337
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM-GFSSF 312
Q G EA+ +F KM G+ P+ +T + + A ++ GR++H IK+ S
Sbjct: 338 EQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSD 397
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V N+++D+Y+KC +E + + F + + D+VSWNA++AG+ + EAIELL +M F
Sbjct: 398 LLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKF 457
Query: 373 EGHCPNLYTYS-----------------------------NILNISSDIPA------IEW 397
+G P++ T++ N IS + A ++
Sbjct: 458 QGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKL 517
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
GK+ H +++ + + +GSAL+ MY+ C L A VF LS++++V WN+++ AQ
Sbjct: 518 GKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQ 577
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG--WHYF------------ 503
G AL++ M + ++ N T + L AC + + +G H F
Sbjct: 578 SGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFI 637
Query: 504 -NSMIRDHG-------------ISPRMDHIA--SVVHLFACRGQTRRA---YEFIKSSPI 544
NS+I +G + P+ D ++ ++ ++ G A ++ ++ +
Sbjct: 638 LNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGL 697
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILST----DPEDTSAHIMLSNVYAEANMWDE 600
+PN + + LLS C +H L+ + K++ T DP + + ++ + A ++E
Sbjct: 698 KPNHITFTNLLSAC-SHSGLIEEGWKYFKMMKTEYAMDPA-VEQYACMVDLLSRAGQFNE 755
Query: 601 T 601
T
Sbjct: 756 T 756
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 224/461 (48%), Gaps = 45/461 (9%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y + C + R G ++H ++ +G+++ + + L+ +Y + G + A+ +FD
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
ERN SW +++ YC G++ +K+F L GV F V AC+ L N +VG
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
++ + E + V +++++ KC ++D+A R F I+ D+ W+ ++ GY G+
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
+A+ M SG+ P +VT+ N
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTW-----------------------------------NA 296
Query: 319 VLDFYSKCELLEESLKTFDEMD-----EHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
++ Y++ EE+ K F EM + +VVSW ALIAG + + EA+ + + M+ E
Sbjct: 297 IISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHC-CIVKPGFDSNVVIGSALVDMYAKCGRLND 432
G PN T ++ ++ +++ + G++ H CI DS++++G++LVD YAKC +
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
AR+ F + +LVSWN ML GYA G EA+E+ S M+ I+P+ T+ G+++
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQ 476
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
G + +F M G+ P I+ L AC GQ R
Sbjct: 477 YGDGKAALEFFQRM-HSMGMDPNTTTISGA--LAAC-GQVR 513
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 137/280 (48%), Gaps = 13/280 (4%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G Q+H+ ++ G F+ + +L+ Y + +E++ + FD+M E +V SW A++ +
Sbjct: 108 GFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCG 167
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
Y E I+L M+ EG P+ + + + S++ GK + ++ GF+ N +
Sbjct: 168 LGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCV 227
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+++DM+ KCGR++ AR+ F+ + K++ WN M+ GY G ++AL+ S M+ + +
Sbjct: 228 KGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGV 287
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+ T+ ++S G EE YF M G+ ++ S L A G + Y
Sbjct: 288 KPDQVTWNAIISGYAQSGQFEEASKYFLEM---GGLKDFKPNVVSWTALIA--GSEQNGY 342
Query: 537 EFIKSS--------PIEPNKVVWRCLLSGCKTHKDLVLGR 568
+F S ++PN + +S C L GR
Sbjct: 343 DFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGR 382
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 11/248 (4%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y++IL + + G Q H +V G D +GS L+++Y + G + DAR++FD +S
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
+N+ SW ++ Y G E ++++ +M ++P+ F V AC + G
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRCLLSGC 558
++ M+ G S++ +F G+ RR +E I+ + +W ++SG
Sbjct: 212 VYDYML-SIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDV----FMWNIMVSGY 266
Query: 559 KTHKDL--VLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
+ + L + K+ P+ + + ++S YA++ ++E +K M K
Sbjct: 267 TSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEEASKYFLEMGGLKDFKP 325
Query: 617 TGCSWTEL 624
SWT L
Sbjct: 326 NVVSWTAL 333
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 198/653 (30%), Positives = 334/653 (51%), Gaps = 72/653 (11%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ +Y + + +++FD M ++NV W+ ++S +++IG + ++ F++MV
Sbjct: 140 LVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMV------- 192
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
K I G+ S EL FD
Sbjct: 193 -------------------EKGIEGKRPESASEL------------------------FD 209
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+R+ ISW S++S Y G GL+I+ G+ + + SVL CA G L +
Sbjct: 210 KLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSL 269
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +HSL K E + L+++Y+KC LD A RVF + ++ +W+++I GY +
Sbjct: 270 GKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G++ AI L +M G+ V + +L A A G+ +H I S FV
Sbjct: 330 DGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFV 389
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
N ++D Y+KC ++ + F M D++SWN +I G L
Sbjct: 390 CNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI-GELK------------------- 429
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+ T + IL + + A+E GK+ H I++ G+ S+ + +ALVD+Y KCG L AR
Sbjct: 430 -PDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+FD + SK+LVSW M+ GY HG G EA+ ++ M++ I+P++ +FI +L AC H GL
Sbjct: 489 LFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+E+GW +F M D I P+++H A +V L + G +AYEFI++ PI P+ +W LL
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
GC+ + D+ L AE++ +PE+T +++L+N+YAEA W+E ++R+ + +K L+K
Sbjct: 609 CGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRK 668
Query: 616 DTGCSWTELQNKMHYF-STSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
+ GCSW E++ K++ F S + + + ++ ++ + + GY P Y+
Sbjct: 669 NPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYA 721
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 225/452 (49%), Gaps = 25/452 (5%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F ++ + ++ ++ R A +LFD++ +R+VISW+++ISG+ G+ E L ++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYK 240
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M+ ++ + T + + CA+ G GK +H +S E + SN L++MY KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCG 300
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L A VF+ ERN +SW S+++ Y + G +++ K GV + + S+L
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILH 360
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
ACA G+L G +H + +E + FV L+++Y KC +D A+ VFS + + D+ +
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIIS 420
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ +IG L P T + +L A A + G+++H I+
Sbjct: 421 WNTMIG---------------------ELKPDSRTMACILPACASLSALERGKEIHGYIL 459
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
+ G+SS VAN ++D Y KC +L + FD + D+VSW +I+G+ + EAI
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIA 519
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--SALVDM 423
+M G P+ ++ +IL S +E G + I+K F+ + + +VD+
Sbjct: 520 TFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDL 578
Query: 424 YAKCGRLNDARKVFDHLS-SKNLVSWNTMLVG 454
++ G L+ A + + L + + W +L G
Sbjct: 579 LSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 197/428 (46%), Gaps = 52/428 (12%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I S F + N LL MY K ++ A ++F++M ERNV+SW+++I+G+++ G + A+
Sbjct: 278 IKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M ++ + + ACA G +GK++H + + +E N V N L++MY
Sbjct: 338 RLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMY 397
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A VF + ++ ISW +++ GE + + A
Sbjct: 398 TKCGSMDGANSVFSTMVVKDIISWNTMI------GE---------------LKPDSRTMA 436
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L ACA L L+ G +IH + + D+ VA L++LY KC L LA +F I
Sbjct: 437 CILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 496
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
DL +W+ +I GY G EAI F +M +G+ P EV+F +L A + H
Sbjct: 497 DLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS-----------H 545
Query: 302 SLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSWN 348
S +++ G+ F + N ++D S+ L ++ + + + D W
Sbjct: 546 SGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWG 605
Query: 349 ALIAGHLASCHYGEAIEL---LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
AL+ G C IEL + + +FE N Y + NI ++ E K+ I
Sbjct: 606 ALLCG----CRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKI 661
Query: 406 VKPGFDSN 413
K G N
Sbjct: 662 GKKGLRKN 669
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 217/480 (45%), Gaps = 84/480 (17%)
Query: 137 SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
+++R + + + +CQ G + +++ + +KS + +S SVL CA +L G
Sbjct: 61 TIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETKTYS--SVLQLCAGSKSLTDG 118
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
++HS++ + D+ + + L++LYA C L RVF ++ ++ W+ ++ YA++
Sbjct: 119 KKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKI 178
Query: 257 GKACEAIDLFVKMFSSGLMPSE----------------VTFSYVLGAFADVKETIGGRQL 300
G E+I LF M G+ ++++ ++ + T G ++
Sbjct: 179 GDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEI 238
Query: 301 HSLIIKMG-----------------------------------FSSFTFVANTVLDFYSK 325
+ ++ +G F +NT+LD YSK
Sbjct: 239 YKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSK 298
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C L+ +L+ F++M E +VVSW ++IAG+ AI LL+ M EG ++ ++I
Sbjct: 299 CGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSI 358
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L+ + +++ GK H I +SN+ + +AL+DMY KCG ++ A VF + K++
Sbjct: 359 LHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDI 418
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
+SWNTM+ ++KP+ T +L AC + +E G
Sbjct: 419 ISWNTMI---------------------GELKPDSRTMACILPACASLSALERGKEIHGY 457
Query: 506 MIRDHGISPRMDHIA-SVVHLF---ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++R+ S R H+A ++V L+ G R ++ I S + V W ++SG H
Sbjct: 458 ILRNGYSSDR--HVANALVDLYVKCGVLGLARLLFDMIPSKDL----VSWTVMISGYGMH 511
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 102/240 (42%), Gaps = 38/240 (15%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ + N L+ +YVK + A+ LFD +P ++++SW+ +ISG+ G A
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEA 517
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
+ F M +EP+ +++ + AC+ G G M +E C+++
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVD 577
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+ + G LS A +F+ + ++ W +LL CG
Sbjct: 578 LLSRTGNLSKAYEFIETLPIAPDATIWGALL-----CG---------------------- 610
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
C + ++++ ++ VF+ E + + L N+YA+ EK + R+ I
Sbjct: 611 --------CRIYHDIELAEKVAERVFELEPENTGYYVL-LANIYAEAEKWEEVKRMREKI 661
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/553 (33%), Positives = 303/553 (54%), Gaps = 4/553 (0%)
Query: 114 SNCLINMYGKCGLLSS----AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
N L+NM +C S +F+F + N W +++ ++ + L R
Sbjct: 45 DNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMR 104
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
G + F+ VL ACA L +L++G++IH+LV K + D FV L+ LYAKC L+
Sbjct: 105 SEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLE 164
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A +VF +I ++ +W+A+I GY +GK EAID+F ++ L P T VL A
Sbjct: 165 DAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACT 224
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ + G +H I++MG FV +++D Y+KC +E++ FD M E D+VSW A
Sbjct: 225 QLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGA 284
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I G+ + EAI+L M E P+ YT +L+ + + A+E G+ + +
Sbjct: 285 MIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNE 344
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
F N V+G+AL+D+YAKCG ++ A +VF + K+ V WN ++ G A +G + + ++
Sbjct: 345 FLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFG 404
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
+++ IKP+ NTFIG+L C H GLV+EG YFNSM R ++P ++H +V L
Sbjct: 405 QVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRA 464
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
G A++ I++ P+E N +VW LL C+ H+D L A ++++ +P ++ +++LS
Sbjct: 465 GLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLS 524
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMN 649
N+Y+ WDE AKVR M EK ++K GCSW E+ +H F ++ ++
Sbjct: 525 NIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLD 584
Query: 650 QLSVHLFDGGYVP 662
+L+ + GYVP
Sbjct: 585 ELTKKMKVAGYVP 597
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 214/445 (48%), Gaps = 6/445 (1%)
Query: 14 NHLLLMYVK----FSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVC 69
N+LL M ++ FS N + LF ++ + N+ W+ +I G + A+ ++ LM
Sbjct: 46 NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
PN +T+ + ACA D + G +IH + + G + + V L+ +Y KCG L
Sbjct: 106 EGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLED 165
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A VFD ++N +SW +++S Y G+ + +F + +A F+ VL AC
Sbjct: 166 AHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQ 225
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
LG+L G IH + + + + FV L+++YAKC ++ A VF + D+ +W A+
Sbjct: 226 LGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAM 285
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I GYA G EAIDLF++M + P T VL A A + G + L+ + F
Sbjct: 286 IQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEF 345
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
+ ++D Y+KC + + + F M E D V WNA+I+G + + + L
Sbjct: 346 LYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQ 405
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-PGFDSNVVIGSALVDMYAKCG 428
+ G P+ T+ +L + ++ G++ + + ++ +VD+ + G
Sbjct: 406 VEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAG 465
Query: 429 RLNDARKVFDHLSSK-NLVSWNTML 452
L++A ++ ++ + N + W +L
Sbjct: 466 LLDEAHQLIRNMPMEANAIVWGALL 490
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 180/357 (50%), Gaps = 6/357 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF +V L+ +Y K + DA K+FD++P++NV+SW+A+ISG+ +G A
Sbjct: 138 VVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREA 197
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ FR ++ L P+ +T V +SAC GD SG+ IH + G+ N V L++M
Sbjct: 198 IDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDM 257
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A+ VFD E++ +SW +++ Y G + +FL ++ V ++
Sbjct: 258 YAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTV 317
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
VL ACA LG L++G + LV + ++ + LI+LYAKC + A VF ++
Sbjct: 318 VGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKE 377
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+A+I G A G + LF ++ G+ P TF +L GR+
Sbjct: 378 KDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRY 437
Query: 301 HSLIIKMGFSSFTFVA---NTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
+ + + F S T ++D + LL+E+ + M E + + W AL+
Sbjct: 438 FNSMYR--FFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGA 492
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 208/698 (29%), Positives = 353/698 (50%), Gaps = 60/698 (8%)
Query: 32 LFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGD 91
+ + + + W+ LI + G + A+N M+ +++T + AC
Sbjct: 73 VLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPS 132
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER---NSISWVSL 148
R G HG + +G E N + N L+ MY +CG L A +FD +R + ISW S+
Sbjct: 133 YRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSI 192
Query: 149 LSSYCQCGEHVHGLKIF-----LLSRKSGVAISEF-SCASVLGACAVLGNLKVGMQIHSL 202
+S++ + L +F ++ K S+ S ++L AC L + ++H
Sbjct: 193 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGN 252
Query: 203 VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG----- 257
+ D FV LI+ YAKC ++ A +VF+ ++ D+ +W+A++ GY+Q G
Sbjct: 253 AIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAA 312
Query: 258 ----------------------------KAC--EAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ C EA+++F +M SG +P+ VT VL A
Sbjct: 313 FELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSA 372
Query: 288 FADVKETIGGRQLHSLIIKM----------GFSSFTFVANTVLDFYSKCELLEESLKTFD 337
A + G ++H+ +K G V N ++D YSKC + + FD
Sbjct: 373 CASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFD 432
Query: 338 E--MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE--GHCPNLYTYSNILNISSDIP 393
+ ++E +VV+W +I GH +A++L +M+ E G PN YT S IL + +
Sbjct: 433 DIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLA 492
Query: 394 AIEWGKQTHCCIVKP-GFDSNV-VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
AI GKQ H +++ +DS+ + + L++MY+KCG ++ AR VFD +S K+ +SW +M
Sbjct: 493 AIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSM 552
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
+ GY HG G EAL+I+ M++ P+D TF+ VL AC H G+V++G YF+SM D+G
Sbjct: 553 MTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYG 612
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA 571
++PR +H A + L A G+ +A++ +K P+EP VVW LLS C+ H ++ L +A
Sbjct: 613 LTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHAL 672
Query: 572 EKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
K++ + E+ ++ ++SN+YA A W + A++R +MK+ +KK GCSW + Q F
Sbjct: 673 NKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASF 732
Query: 632 STSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ ++ ++ L + GYVP+ ++ H
Sbjct: 733 FVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALH 770
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 154/540 (28%), Positives = 246/540 (45%), Gaps = 92/540 (17%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER---NVISWSALISGFSQIGMPEVA 60
+GF NV N L+ MY + + +A +FDE+ +R +VISW++++S + A
Sbjct: 146 NGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTA 205
Query: 61 LNYFRLMVCCVLEP------NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
L+ F M V E + + V + AC S KE+HG R+G L+ V
Sbjct: 206 LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVG 265
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N LI+ Y KCGL+ +A VF+ ++ +SW ++++ Y Q G ++F RK +
Sbjct: 266 NALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIP 325
Query: 175 I------------SEFSCA-----------------------SVLGACAVLGNLKVGMQI 199
+ S+ C+ SVL ACA LG GM+I
Sbjct: 326 LDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEI 385
Query: 200 HSLVFK-CALEFDK---------FVAMGLINLYAKCEKLDLASRVFSNIQLPD--LTAWS 247
H+ K C L D V LI++Y+KC A +F +I L + + W+
Sbjct: 386 HAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWT 445
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSS--GLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
+IGG+AQ G + +A+ LFV+M S G+ P+ T S +L A A + G+Q+H+ ++
Sbjct: 446 VMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVL 505
Query: 306 K--MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+ SS FVAN +++ YSKC ++ + FD M + +SW +++ G+ EA
Sbjct: 506 RHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEA 565
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG---FDS-NVVIG-- 417
+++ M G P+ T+ +L S HC +V G FDS + G
Sbjct: 566 LDIFDKMRKAGFVPDDITFLVVLYACS-----------HCGMVDQGLSYFDSMSADYGLT 614
Query: 418 ------SALVDMYAKCGRLNDARK-VFDHLSSKNLVSWNTML--------VGYAQHGLGR 462
+ +D+ A+ GRL+ A K V D V W +L V A+H L +
Sbjct: 615 PRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNK 674
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 207/406 (50%), Gaps = 31/406 (7%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNV----ISWSALISGFSQIGMPEVALNYF 64
+V+++N ++ Y + A +LF M + N+ ++W+A+I+G+SQ G ALN F
Sbjct: 292 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 351
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS----------GLELNSHVS 114
R M+ PN T + +SACAS G G EIH ++ G + + V
Sbjct: 352 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 411
Query: 115 NCLINMYGKCGLLSSAQFVFD--ASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRK 170
N LI+MY KC +A+ +FD ERN ++W ++ + Q G+ LK+F ++S
Sbjct: 412 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 471
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK---FVAMGLINLYAKCEK 227
GVA + ++ + +L ACA L +++G QIH+ V + ++D FVA LIN+Y+KC
Sbjct: 472 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR-HHQYDSSAYFVANCLINMYSKCGD 530
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+D A VF ++ +W++++ GY G+ EA+D+F KM +G +P ++TF VL A
Sbjct: 531 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 590
Query: 288 FADVKETIGGRQ-LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVV 345
+ G S+ G + +D ++ L+++ KT +M E V
Sbjct: 591 CSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAV 650
Query: 346 SWNALIAGHLASCHYGEAIELLK---DMLFEGHCPNLYTYSNILNI 388
W AL L++C +EL + + L E + N +Y+ I NI
Sbjct: 651 VWVAL----LSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNI 692
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 227/504 (45%), Gaps = 60/504 (11%)
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
++ Y CG A V + ++ W L+ + + G + + ++G +
Sbjct: 57 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLD 116
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
F+ VL AC L + + G H L+ E + F+ L+ +Y++C L+ AS +F
Sbjct: 117 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 176
Query: 237 NIQ---LPDLTAWSALIGGYAQLGKACEAIDLFVKMF------SSGLMPSEVTFSYVLGA 287
I + D+ +W++++ + + A A+DLF KM + ++ +L A
Sbjct: 177 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 236
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
+K +++H I+ G FV N ++D Y+KC L+E ++K F+ M+ DVVSW
Sbjct: 237 CGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSW 296
Query: 348 NALIAGHLASCHYGEAIELLKD-----------------------------------MLF 372
NA++AG+ S ++ A EL K+ M+F
Sbjct: 297 NAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIF 356
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP----------GFDSNVVIGSALVD 422
G PN T ++L+ + + A G + H +K G D ++++ +AL+D
Sbjct: 357 SGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 416
Query: 423 MYAKCGRLNDARKVFDH--LSSKNLVSWNTMLVGYAQHGLGREALEIYSMM--QENKIKP 478
MY+KC AR +FD L +N+V+W M+ G+AQ+G +AL+++ M + + P
Sbjct: 417 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 476
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS-VVHLFACRGQTRRAYE 537
N T +L AC H+ + G ++R H +A+ ++++++ G A
Sbjct: 477 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARH 536
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTH 561
S + + + W +++G H
Sbjct: 537 VFDSMS-QKSAISWTSMMTGYGMH 559
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 163/336 (48%), Gaps = 10/336 (2%)
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
+ + G++ Y C D A V + W+ LI + + G+ AI++ +M
Sbjct: 51 RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 110
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
+G T +VL A ++ G H LI GF S F+ N ++ YS+C LEE
Sbjct: 111 AGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 170
Query: 332 SLKTFDEMDEH---DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+ FDE+ + DV+SWN++++ H+ S + A++L M H S+I++I
Sbjct: 171 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 230
Query: 389 SSDIP------AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+ +P A+ K+ H ++ G +V +G+AL+D YAKCG + +A KVF+ +
Sbjct: 231 VNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEF 290
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
K++VSWN M+ GY+Q G + A E++ M++ I + T+ V++ G E +
Sbjct: 291 KDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNV 350
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
F MI G P I SV+ A G + E
Sbjct: 351 FRQMIFS-GSLPNCVTIISVLSACASLGAFSQGMEI 385
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 139/276 (50%), Gaps = 11/276 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPEVALN 62
G +++ YN L+ MY K A+ +FD++P ERNV++W+ +I G +Q G AL
Sbjct: 403 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 462
Query: 63 YFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS--HVSNCLI 118
F M+ + PN YT + ACA R GK+IH + R +S V+NCLI
Sbjct: 463 LFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLI 522
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
NMY KCG + +A+ VFD+ ++++ISW S+++ Y G L IF RK+G +
Sbjct: 523 NMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 582
Query: 179 SCASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ VL AC+ G + G+ S+ L I+L A+ +LD A + +
Sbjct: 583 TFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKD 642
Query: 238 IQL-PDLTAWSALIGG---YAQLGKACEAIDLFVKM 269
+ + P W AL+ ++ + A A++ V+M
Sbjct: 643 MPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEM 678
>gi|225468012|ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 602
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/510 (34%), Positives = 301/510 (59%), Gaps = 4/510 (0%)
Query: 160 HGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI 219
L+ F SG ++F + L +CA L N +G+QIH+ + + E + F+ L+
Sbjct: 84 EALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALV 143
Query: 220 NLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEV 279
+LYAKC+ + A RVF ++ D +W+++I G+++ G+ EAI F +M S + P+ V
Sbjct: 144 DLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCV 203
Query: 280 TFSYVLGAFADVKETIGGR--QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
T+ V+ A + ETI + LH+ ++K+GF TFV + ++D YSKC +++++ F
Sbjct: 204 TYVSVISACTGL-ETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFG 262
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
E D + +N++I+G+ + EA++L +M G P +T ++ILN + ++
Sbjct: 263 TTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQ 322
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
G+Q H + K G +SNV + SAL+DMY+KCG +++AR VFD KN V W +M+ GYAQ
Sbjct: 323 GRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQ 382
Query: 458 HGLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
G G E L ++ ++ E P+ F VL+AC H G +++G YFN M RD+G+ P +
Sbjct: 383 SGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDL 442
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
D A +V L+ G R+A E +++ P EPN V+W LS CK + + LGR AA+K+
Sbjct: 443 DQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFK 502
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRF 636
+P T+ ++ ++++YA+A +W E ++RK+MK+K L+K G SW E+ ++H F +
Sbjct: 503 MEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVHVFLVADA 562
Query: 637 AQFQGIDLHEVMNQLSVHLFDGGYVPDPIY 666
+ + D+ + +L++ + + GY P I+
Sbjct: 563 SHPRSRDICVELERLNLEMKEVGYTPQQIF 592
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 166/296 (56%), Gaps = 16/296 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +GF N+ + L+ +Y K I DA+++FD M + + +SW+++ISGFS+ G + A
Sbjct: 127 IIQTGFEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEA 186
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE--------IHGRMYRSGLELNSH 112
+ +F+ M+ ++PN TYV +SAC +G E +H + + G + +
Sbjct: 187 ILFFKEMLGSQIKPNCVTYVSVISAC-------TGLETIFDQCALLHAHVVKLGFGVKTF 239
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
V +CLI+ Y KCG + A +F ++ER++I + S++S Y Q LK+F+ R +G
Sbjct: 240 VVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNG 299
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+ ++ + S+L AC L L+ G Q+HSLV K E + FV L+++Y+KC +D A
Sbjct: 300 LNPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEAR 359
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGA 287
VF + W+++I GYAQ G+ E + LF ++ + G P + F+ VL A
Sbjct: 360 CVFDQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTA 415
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 218/446 (48%), Gaps = 11/446 (2%)
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL F M +P + A+++CA + G +IH R+ ++G E N +++ L++
Sbjct: 85 ALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALVD 144
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y KC + A+ VFD + + +SW S++S + + G + F S + + +
Sbjct: 145 LYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVT 204
Query: 180 CASVLGACAVLGNL-KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
SV+ AC L + +H+ V K FV LI+ Y+KC ++D A +F
Sbjct: 205 YVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTT 264
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D ++++I GY+Q EA+ LFV+M ++GL P++ T + +L A + GR
Sbjct: 265 IERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGR 324
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+HSL+ KMG S FV + +LD YSKC ++E+ FD+ E + V W ++I G+ S
Sbjct: 325 QVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQSG 384
Query: 359 HYGEAIELLKDMLF-EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVI 416
E + L + ++ EG P+ ++ +L + ++ G + + G ++
Sbjct: 385 RGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQ 444
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVG---YAQHGLGREALEIYSMMQ 472
+ LVD+Y + G L A+++ + + + N V W + L Y + LGREA + M+
Sbjct: 445 YACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKME 504
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEE 498
P ++ + S GL E
Sbjct: 505 PCSTAP----YVAMASIYAQAGLWSE 526
>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 196/570 (34%), Positives = 317/570 (55%), Gaps = 14/570 (2%)
Query: 104 RSGLELNSH----VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHV 159
+SG N+ ++ L+ Y + GL S A+ +FD ER+ ++W +++S Y C E+
Sbjct: 33 KSGTPFNAKGTSILATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYT 92
Query: 160 HGLKIFLLSRKSGV-AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMG 217
+F+ K+G + F+ +SVL AC + + G +H L K +E +V
Sbjct: 93 QAWSVFVDMVKNGNDPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNA 152
Query: 218 LINLYAKCE-KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
L+++YA C + A VF +I+ ++ +W+ LI GY G A+ +F +M G+
Sbjct: 153 LMDMYASCGVGMRDACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVAL 212
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
+ + S + A A + GRQ+H+ +IK GF S V N++LD Y +C L E+ K F
Sbjct: 213 NPHSISIAVRACASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYF 272
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIE---LLKDMLFEGHCPNLYTYSNILNISSDIP 393
++M E D+++WN LIAG+ S ++IE + M EG PN +T+++++ ++
Sbjct: 273 NDMTEKDLITWNTLIAGYERS----DSIEPFFIFSQMESEGFSPNCFTFTSLVAACANAA 328
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
A++ G+Q H I + G D N+ + +AL+DMYAKCG + D++K F +S NLVSW +M++
Sbjct: 329 ALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMI 388
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
GY HG G+EA+E++ M + I+P+ F+ VL AC H GLV++G Y N MI D+ I
Sbjct: 389 GYGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIK 448
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEK 573
P + VV L G+ AY+ I+S P ++ VW LL CK H LG+ AA+K
Sbjct: 449 PNQEIYGCVVDLLGRPGRVEDAYQLIRSMPFMADESVWGALLGACKAHNFSRLGKLAAKK 508
Query: 574 ILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
L+ P ++MLSN+YA W E A++RK+MK +K G SW E++N+++ F
Sbjct: 509 ALALRPNMVETYVMLSNIYAAEGKWGEAARMRKLMKRAGCRKVAGRSWIEVRNQVYSFVV 568
Query: 634 SRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++EV+ H+ + GYVP+
Sbjct: 569 GNKMGSHKEWVYEVLELPVQHMKEAGYVPE 598
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 227/457 (49%), Gaps = 6/457 (1%)
Query: 11 ITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC 70
I LL Y + + A+ LFDEMPER+V++W+ +ISG++ A + F MV
Sbjct: 45 ILATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKN 104
Query: 71 VLE-PNYYTYVGAVSACASRGDARSGKEIHG-RMYRSGLELNSHVSNCLINMYGKCGL-L 127
+ PN +T + AC G+ +HG + R +E +V N L++MY CG+ +
Sbjct: 105 GNDPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGM 164
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A VF E+N +SW +L++ Y G L+IF GVA++ S + + AC
Sbjct: 165 RDACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRAC 224
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A +G+ G QIH+ V K E D V ++++Y +C L A++ F+++ DL W+
Sbjct: 225 ASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWN 284
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
LI GY + + E +F +M S G P+ TF+ ++ A A+ G+Q+H I +
Sbjct: 285 TLIAGYER-SDSIEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRR 343
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
G +AN ++D Y+KC + +S K F EM ++VSW +++ G+ + EA+EL
Sbjct: 344 GLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELF 403
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+M+ G P+ + +L+ S ++ G + +C I N I +VD+ +
Sbjct: 404 DEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVVDLLGR 463
Query: 427 CGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGR 462
GR+ DA ++ + + W +L H R
Sbjct: 464 PGRVEDAYQLIRSMPFMADESVWGALLGACKAHNFSR 500
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 137/253 (54%), Gaps = 3/253 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF ++ N +L MY + +++A K F++M E+++I+W+ LI+G+ + E
Sbjct: 240 VIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTLIAGYERSDSIE-P 298
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M PN +T+ V+ACA+ + G+++HG ++R GL+ N ++N LI+M
Sbjct: 299 FFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLELANALIDM 358
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + +Q F N +SW S++ Y G +++F +SG+ +
Sbjct: 359 YAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFDEMVRSGIRPDQVVF 418
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+VL AC+ G + G++ I+ ++ ++ ++ + +++L + +++ A ++ ++
Sbjct: 419 MAVLHACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVVDLLGRPGRVEDAYQLIRSMP 478
Query: 240 -LPDLTAWSALIG 251
+ D + W AL+G
Sbjct: 479 FMADESVWGALLG 491
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/661 (30%), Positives = 339/661 (51%), Gaps = 4/661 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G H +++T L I+ A LF +P ++ ++ LI FS P A
Sbjct: 33 IILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSA 92
Query: 61 LN-YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
++ Y L LEP+ +TY +S +S G +G + V + ++
Sbjct: 93 VSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHS---IVAGFGSDLFVGSAIVA 149
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y K +++A+ VFD LER+++ W +++S + + IF K G+ +
Sbjct: 150 CYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTT 209
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
A+VL A L +L +GM I L K +V GL LY+KC +++ A +F I
Sbjct: 210 VAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIG 269
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PDL +++A+I GY + ++ LF ++ SG + + ++ F R
Sbjct: 270 QPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRC 329
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H K G S + V+ + YS+ +E + FDE E + SWNA+I+G+ +
Sbjct: 330 IHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGL 389
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+AI L ++M PN T ++IL+ + + A+ GK H I + F+SN+ + +A
Sbjct: 390 TEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTA 449
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+DMYAKCG + +A+++F + KN V+WN M+ GY HG G EAL +++ M +++ P
Sbjct: 450 LIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPT 509
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ VL AC H GLV EG F SM+ DHG P +H A +V L G +A +FI
Sbjct: 510 GVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFI 569
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ P+EP VW LL C HKD L R A++K+ DP++ +++LSN+Y+ +
Sbjct: 570 RKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYP 629
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
E A VR ++K + L K GC+ E+ N +H F++ + Q ++ ++ +L+ + + G
Sbjct: 630 EAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAG 689
Query: 660 Y 660
+
Sbjct: 690 F 690
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 200/454 (44%), Gaps = 46/454 (10%)
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q H+ + L D L + + + +D AS +FS I PDL ++ LI ++
Sbjct: 28 QTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNN 87
Query: 258 KACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
A+ L+ + S+ L P T+++V+ + + + I GF S FV
Sbjct: 88 SPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHS---IVAGFGSDLFVG 144
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
+ ++ Y K + + K FD M E D V WN +++G + + + EAI + DM+ G
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIG 204
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
+ T + +L +++ + G C +K GF S+ + + L +Y+KCG + AR +
Sbjct: 205 FDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLL 264
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV---------- 486
F + +LVS+N M+ GY + ++ ++ + + K N ++ +G+
Sbjct: 265 FGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHL 324
Query: 487 -LSACVHIGLVEEGWHYFNSMIRD--HGISPRMDHIASVVHLF----------------- 526
L+ C+H G + NS + + R++ I S LF
Sbjct: 325 HLTRCIH-GFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISG 383
Query: 527 -ACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDT 582
A G T +A ++ ++ + PN V +LS C L LG++ + I + E
Sbjct: 384 YAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLI---NRESF 440
Query: 583 SAHIMLS----NVYAEANMWDETAKVRKIMKEKS 612
++I +S ++YA+ E ++ +M EK+
Sbjct: 441 ESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKN 474
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 212/621 (34%), Positives = 329/621 (52%), Gaps = 15/621 (2%)
Query: 15 HLLLMYVKFSRINDAQKLFDEMPER--NVISWSALISGFSQIGMPEVALNYFRLMVCCVL 72
+L +Y + + A+ +FDE+P N I+W +I + G E AL+ + M+ +
Sbjct: 40 NLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGV 99
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P +TY + ACA GK IH + S + +V L++ Y KCG L A
Sbjct: 100 RPTKFTYPFVLKACAGLRAIEDGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIK 159
Query: 133 VFDASLERNSISWVSLLSSYCQ--CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
VFD +R+ ++W +++S + C V GL FL R+S S +++G L
Sbjct: 160 VFDEMPKRDIVAWNAMISGFSLHCCLTDVIGL--FLDMRRSDCLSPNLS--TIVGMFPAL 215
Query: 191 GN---LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
G L+ G +H + D V G++++YAK + + A RVF + + WS
Sbjct: 216 GRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWS 275
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSG--LMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
A+IGGY + EA ++F++M + M + V +L A + GGR +H I
Sbjct: 276 AMIGGYVENEMIKEAGEVFLQMLVNADMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAI 335
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K GF V NTV+ FY+K L ++ + F E+ D+VS+N+LI+G + +C E+
Sbjct: 336 KAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFR 395
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L M G P++ T IL S++ A+ G H V G+ N I +AL+DMY
Sbjct: 396 LFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYT 455
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KCG+L A++VFD + +++VSWNTML G+ HGLG+EAL +++ MQ+ + P++ T +
Sbjct: 456 KCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLA 515
Query: 486 VLSACVHIGLVEEGWHYFNSMIR-DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
+LSAC H GLV+EG FNSM R D + PR+DH + L A G AY+F+ P
Sbjct: 516 ILSACSHSGLVDEGKQLFNSMSRGDFNVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPF 575
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP+ V LLS C T+K++ LG ++K+ S E T + ++LSN Y+ A W++ AK+
Sbjct: 576 EPDIRVLGTLLSACWTYKNVELGNEVSKKMQSLG-ETTESLVLLSNTYSAAERWEDAAKI 634
Query: 605 RKIMKEKSLKKDTGCSWTELQ 625
R K+ L K G SW ++
Sbjct: 635 RMTQKKSGLLKTPGYSWVDVD 655
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 211/437 (48%), Gaps = 9/437 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFS-QIGMPEVALN 62
S F ++ L+ Y K ++ A K+FDEMP+R++++W+A+ISGFS + +V
Sbjct: 132 SNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCCLTDVIGL 191
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+ + L PN T VG A G R GK +HG R G + V ++++Y
Sbjct: 192 FLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA 251
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL--LSRKSGVAISEFSC 180
K + A+ VFD+ ++N ++W +++ Y + ++FL L ++ +
Sbjct: 252 KSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADMAMVTPVAI 311
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+L CA G+L G +H K D V +I+ YAK L A R F+ I L
Sbjct: 312 GLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGL 371
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ ++++LI G + +A E+ LF +M SSG+ P T +L A +++ G
Sbjct: 372 KDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSC 431
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + G++ T + N ++D Y+KC L + + FD M + D+VSWN ++ G
Sbjct: 432 HGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLG 491
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--- 417
EA+ L M G P+ T IL+ S ++ GKQ + + F NV+
Sbjct: 492 KEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDF--NVIPRLDH 549
Query: 418 -SALVDMYAKCGRLNDA 433
+ + D+ A+ G L++A
Sbjct: 550 YNCMTDLLARAGYLDEA 566
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 163/297 (54%), Gaps = 6/297 (2%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDK-FVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L +C NL +G IH + K +L V + L LYA C +++LA VF I P
Sbjct: 5 LLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHP 64
Query: 242 DLT--AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ AW +I Y G A +A+DL+ KM +SG+ P++ T+ +VL A A ++ G+
Sbjct: 65 RINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKL 124
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+HS + F++ +V ++DFY+KC L+ ++K FDEM + D+V+WNA+I+G C
Sbjct: 125 IHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCC 184
Query: 360 YGEAIELLKDMLFEGHC--PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+ I L DM C PNL T + A+ GK H + GF +++V+
Sbjct: 185 LTDVIGLFLDMR-RSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ ++D+YAK + AR+VFD KN V+W+ M+ GY ++ + +EA E++ M N
Sbjct: 244 TGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVN 300
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 123/254 (48%), Gaps = 7/254 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +GF ++ N ++ Y K+ + DA + F E+ ++++S+++LISG + E +
Sbjct: 335 IKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESF 394
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + P+ T +G ++AC++ G HG +G +N+ + N L++MY
Sbjct: 395 RLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMY 454
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG L A+ VFD +R+ +SW ++L + G L +F + +GV E +
Sbjct: 455 TKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLL 514
Query: 182 SVLGACAVLGNLKVGMQIHSLV----FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
++L AC+ G + G Q+ + + F D + M +L A+ LD A +
Sbjct: 515 AILSACSHSGLVDEGKQLFNSMSRGDFNVIPRLDHYNCM--TDLLARAGYLDEAYDFVNK 572
Query: 238 IQL-PDLTAWSALI 250
+ PD+ L+
Sbjct: 573 MPFEPDIRVLGTLL 586
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/626 (28%), Positives = 333/626 (53%), Gaps = 6/626 (0%)
Query: 1 MITSGFHPN-VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV 59
++ G H + L+ Y + A + D MP RN +W+A I G G
Sbjct: 65 LLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGLVDSGQFAE 124
Query: 60 AL-NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGK----EIHGRMYRSGLELNSHVS 114
AL Y+ ++ + + +TY + ACA+ G G+ + + R + + V
Sbjct: 125 ALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPSVFVQ 184
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
L++M+ KCG L A+ VF++ LER+ +W +++ G+ + + +F R G
Sbjct: 185 CALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFL 244
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
A+V+ AC L+ GM +H +C + D V+ L+++Y KC L +A RV
Sbjct: 245 ADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRV 304
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F +I D+ +WS LI GY+Q GK +++LF +M ++GL P+ T + +L + +++K
Sbjct: 305 FWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLF 364
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G+++H ++ GF F+ + +DFYS+ + E+ + M + D+V WN+++AG+
Sbjct: 365 RHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGY 424
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ + A+ + + G P+ T ++L + + + GK+ H +V+ S
Sbjct: 425 AVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVC 484
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +AL+DMY KC L +++F ++ ++ ++NT++ + +HG EA+ ++ +M+ +
Sbjct: 485 SVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRD 544
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
I P+ TF+ +LS+C H GL+E+G H+++ M++D+ ISP +H + VV L++ G+
Sbjct: 545 GIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDD 604
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
A++F+ S E V CLL C+ H + + A++I +P D HI+LSN+YA
Sbjct: 605 AWKFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIFEQNPSDPGYHILLSNIYAN 664
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCS 620
A MW ++R +++ +SLK TG S
Sbjct: 665 AGMWSHVTRIRTMIENRSLKNKTGNS 690
>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 204/652 (31%), Positives = 350/652 (53%), Gaps = 4/652 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G + + LL MY + ++DA+K+FD MP R++++WS L+S + G A
Sbjct: 127 IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKA 186
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ MV +EP+ T + V CA G R + +HG++ R +L+ + N L+ M
Sbjct: 187 LRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTM 246
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L S++ +F+ ++N++SW +++SSY + L+ F KSG+ + +
Sbjct: 247 YSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTL 306
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFD-KFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL +C ++G ++ G +H + L+ + + +++ L+ LYA+C KL V +
Sbjct: 307 YSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVS 366
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ AW++LI YA G +A+ LF +M + + P T + + A + G+Q
Sbjct: 367 DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQ 426
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +I+ S FV N+++D YSK ++ + F+++ VV+WN+++ G + +
Sbjct: 427 IHGHVIRTDVSD-EFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGN 485
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EAI L M N T+ ++ S I ++E GK H ++ G ++ +A
Sbjct: 486 SVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTA 544
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+DMYAKCG LN A VF +SS+++VSW++M+ Y HG A+ ++ M E+ KPN
Sbjct: 545 LIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPN 604
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ F+ VLSAC H G VEEG +YFN +++ G+SP +H A + L + G + AY I
Sbjct: 605 EVVFMNVLSACGHSGSVEEGKYYFN-LMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTI 663
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
K P + VW L++GC+ H+ + + + + +DT + +LSN+YAE W+
Sbjct: 664 KEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWE 723
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
E ++R MK +LKK G S E+ K+ F + Q +++ + L
Sbjct: 724 EFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 261/501 (52%), Gaps = 3/501 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++T + + L+ Y + ++ +F+ P + + LI + + A
Sbjct: 25 LVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAA 84
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACA-SRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
++ + +V + + + + + ACA SR G ++HGR+ + G++ ++ + L+
Sbjct: 85 IDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLC 144
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MYG+ G LS A+ VFD R+ ++W +L+SS + GE V L++F GV +
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVT 204
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV+ CA LG L++ +H + + + D+ + L+ +Y+KC L + R+F I
Sbjct: 205 MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA 264
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+A+I Y + + +A+ F +M SG+ P+ VT VL + + G+
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 300 LHSLIIKMGFS-SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H ++ ++ ++ +++ Y++C L + + + ++V+WN+LI+ +
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+A+ L + M+ + P+ +T ++ ++ + + GKQ H +++ S+ + +
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQN 443
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+L+DMY+K G ++ A VF+ + +++V+WN+ML G++Q+G EA+ ++ M + ++
Sbjct: 444 SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 503
Query: 479 NDNTFIGVLSACVHIGLVEEG 499
N+ TF+ V+ AC IG +E+G
Sbjct: 504 NEVTFLAVIQACSSIGSLEKG 524
>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
Length = 625
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/593 (32%), Positives = 321/593 (54%), Gaps = 5/593 (0%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
S FH NV+ N L+ Y + + A+K+FD + +++ISW++++ +SQ G E L
Sbjct: 35 ASDFHSNVVVKNSLVSAYTRSGDLRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLE 94
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
FR M +EP+ TY + AC++ GKE+H R+ RS + + ++ LINMY
Sbjct: 95 LFRKMD---VEPDSITYASILGACSAMELLELGKEVHARVSRSRFKSDPALAAALINMYS 151
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG+L SA+ VFD + W +++S Q G L +F + V I + S +
Sbjct: 152 KCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLT 211
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-QLP 241
+L AC L +L G++IH C ++ D V + N+Y+KC ++DLA ++F + +
Sbjct: 212 ILSACCALEDLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKT 271
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ +W+++I YAQ G+ EA++L+ M G+ P ++T++ LGA + G ++H
Sbjct: 272 NVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIH 331
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
S I + + F+ +++ Y+KC LE ++ F++M + V+W+A++ + +
Sbjct: 332 SRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDR 391
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFDSNVVIGSAL 420
EA++L M+ EG P+ T + L S I A++ GK H I + + + ++L
Sbjct: 392 EALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSL 451
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
++MYAKCG L A +F +L ++ SWNT++VG+A HG E L ++ M ++ + P+
Sbjct: 452 LNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDY 511
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF VL AC H GL++ G +F SM D+ I P +DH +V + + G R A
Sbjct: 512 VTFACVLLACSHAGLLDRGRSHFLSMTGDYCIKPMLDHYECLVDVLSRAGWAREAEALAM 571
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
+ P P V W LL CK H + G AA +L E +S++++LSN+ A
Sbjct: 572 AMPFTPRPVTWTTLLGACKLHGETKRGVEAARSLLELGFECSSSYVLLSNLVA 624
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 232/429 (54%), Gaps = 7/429 (1%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
PN T+ G S+C+ R + + I + S N V N L++ Y + G L SA+
Sbjct: 6 FRPNGVTFSGVASSCSGREELDT---IQASIAASDFHSNVVVKNSLVSAYTRSGDLRSAR 62
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD+ ++ ISW S++ +Y Q H HG ++ L RK V + AS+LGAC+ +
Sbjct: 63 KVFDSIENKDLISWNSMVVAYSQ---HGHGEEMLELFRKMDVEPDSITYASILGACSAME 119
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
L++G ++H+ V + + D +A LIN+Y+KC L+ A RVF IQ D + W+A+I
Sbjct: 120 LLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMIS 179
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G Q G+A EA+ LF +M + + +V++ +L A +++ G ++H G
Sbjct: 180 GLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASACGMDK 239
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLASCHYGEAIELLKDM 370
V V + YSKC ++ + K FD M+E +VVSWN++IA + S EA+EL + M
Sbjct: 240 DLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALELYELM 299
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
EG P+ TY+ L + G + H I + ++V + +A+V+MYAKCG L
Sbjct: 300 KEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGEL 359
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
A F+ + KN V+W+ M+ + Q G REAL++Y M +P++ T G L+AC
Sbjct: 360 ETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLAGALAAC 419
Query: 491 VHIGLVEEG 499
IG ++EG
Sbjct: 420 SRIGALQEG 428
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 175/379 (46%), Gaps = 41/379 (10%)
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M G P+ VTFS V + + +E + + I F S V N+++ Y++
Sbjct: 1 MLLEGFRPNGVTFSGVASSCSGREEL---DTIQASIAASDFHSNVVVKNSLVSAYTRSGD 57
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
L + K FD ++ D++SWN+++ + H E +EL + M E P+ TY++IL
Sbjct: 58 LRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKMDVE---PDSITYASILGA 114
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
S + +E GK+ H + + F S+ + +AL++MY+KCG L AR+VFD + S + W
Sbjct: 115 CSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPW 174
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN---- 504
N M+ G QHG REAL ++ M+ ++ + +++ +LSAC + + EG
Sbjct: 175 NAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASA 234
Query: 505 -SMIRD------------------------HGISPRMDHIA--SVVHLFACRGQTRRA-- 535
M +D G++ + + ++ S++ +A G+ R A
Sbjct: 235 CGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALE 294
Query: 536 -YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD-PEDTSAHIMLSNVYA 593
YE +K ++P+ + + L C ++ G +I + D + N+YA
Sbjct: 295 LYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMYA 354
Query: 594 EANMWDETAKVRKIMKEKS 612
+ + + M+ K+
Sbjct: 355 KCGELETAMSYFEKMRRKN 373
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 300/576 (52%), Gaps = 32/576 (5%)
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y LL + +F+ +++W S++ Y G L F+ SG+
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR------ 233
SVL +CA+L +L +G +H + + L+FD + L+N+Y+K L+ + R
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 234 --------------------------VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
+F + DL +W+ +I G A+ G E + +
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
+M + L P T S VL A+ + G+++H I+ G + +VA++++D Y+KC
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
+ +S + F + E D +SWN++IAG + + + E + + ML P Y++S+I+
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ + + GKQ H I + GFD N+ I S+LVDMYAKCG + A+++FD + +++VS
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
W M++G A HG +A+E++ M+ IKPN F+ VL+AC H GLV+E W YFNSM
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMT 468
Query: 508 RDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLG 567
RD GI+P ++H A+V L G+ AY+FI I P +W LLS C+ H ++ +
Sbjct: 469 RDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMA 528
Query: 568 RYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNK 627
A +IL DP +T A+I+L+N+Y+ A W E AK R M+ ++K CSW E++NK
Sbjct: 529 EKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNK 588
Query: 628 MHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++ F + + E M L + GYVPD
Sbjct: 589 VYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPD 624
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 213/452 (47%), Gaps = 41/452 (9%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
+Y + ++D+ +LF+ + ++W ++I ++ G+P +L F M+ L P++
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL----------- 127
+ + +CA D G+ +HG + R GL+ + + N L+NMY K L
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 128 ---------------------SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
S + +F+ E++ +SW ++++ + G + L++
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
+ + F+ +SVL A ++ G +IH + L+ D +VA LI++YAKC
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
++ + RVF+ + D +W+++I G Q G E + F +M + + P +FS ++
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
A A + G+QLH I + GF F+A++++D Y+KC + + + FD M D+VS
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE-----WGKQT 401
W A+I G +AIEL + M EG PN + +L S ++ + T
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMT 468
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
+ PG + +A+ D+ + GRL +A
Sbjct: 469 RDFGIAPGVEHY----AAVSDLLGRAGRLEEA 496
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 105/187 (56%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G ++ + L+ MY K +R+ D+ ++F + ER+ ISW+++I+G Q G+ + L
Sbjct: 266 IRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 325
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+FR M+ ++P Y++ + ACA GK++HG + R+G + N +++ L++MY
Sbjct: 326 RFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 385
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + +A+ +FD R+ +SW +++ G+ +++F G+ + +
Sbjct: 386 AKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFM 445
Query: 182 SVLGACA 188
+VL AC+
Sbjct: 446 AVLTACS 452
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+GF N+ + L+ MY K I A+++FD M R+++SW+A+I G + G A+
Sbjct: 369 NGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIEL 428
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-----GLELNSHVSNCLI 118
F M ++PN+ ++ ++AC+ G + M R G+E + VS+ L
Sbjct: 429 FEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLL- 487
Query: 119 NMYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
G+ G L A F+ + W +LLS+
Sbjct: 488 ---GRAGRLEEAYDFICGMHIGPTGSIWATLLSA 518
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 202/676 (29%), Positives = 359/676 (53%), Gaps = 8/676 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G P+ I N L+ MY +D + +F M + +V+ W+ +I+G SQ G E
Sbjct: 185 IINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEG 244
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M ++ N TY+ V C + + G+ I R+ S ++ ++ LI++
Sbjct: 245 LLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISL 304
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YG+CG+L A+ + + +R+ ++W +++++ Q G++ + + G ++ +
Sbjct: 305 YGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTY 364
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLASRVFSNI 238
SVL ACA L L G +IH+ V C L + VA+G +I +Y KC + + A VF +
Sbjct: 365 LSVLEACANLEALSQGREIHARVLLCGL-LQREVAVGNSVITMYGKCGQTEAAMSVFEAM 423
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D +W+A+I K +A++LF M GL +E T +L A +++ R
Sbjct: 424 PRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLAR 483
Query: 299 QLHSLIIKMGFS-SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
Q+H+ GF + T V N+V++ Y++C L ++ K FD ++E +V+W+ ++A + S
Sbjct: 484 QIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQS 543
Query: 358 CHYG--EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF-DSNV 414
A + ++M EG P T+ + L+ + + +E G+ H GF ++++
Sbjct: 544 KDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSL 603
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
V+G+ +++MY KCG +DA+ VFD + K L+SWN+++V YA +G EAL M
Sbjct: 604 VLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQ 663
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
P+ T + +L H GL+E G +F S I+DHG+ P + +V L A +G
Sbjct: 664 GFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDA 723
Query: 535 AYEFIKSSPI-EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A E I +SP + + + W LL+ CK++ D G AE++ +P+ + + ++L+N+YA
Sbjct: 724 AEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYA 783
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W + +++RK+M+ S+KK+ GCSW EL +H F + + ++ E + +L++
Sbjct: 784 SVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTL 843
Query: 654 HLFDGGYVPDPIYSSH 669
+ + GYVPD H
Sbjct: 844 RMREAGYVPDTTNVVH 859
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 161/503 (32%), Positives = 262/503 (52%), Gaps = 4/503 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG N+I N L+ MY K + A+K+FD M R+V+SW+A+++ ++Q G A
Sbjct: 84 VVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQA 143
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M ++PN T+V V CA G++IH R+ GLE + + N L++M
Sbjct: 144 LECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHM 203
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YG CG + VF + + + W ++++ Q G++ GL +F GV +E +
Sbjct: 204 YGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTY 263
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S++ C L +K G I + + + +A LI+LY +C LD A + ++
Sbjct: 264 MSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQ 323
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ AW+A++ AQ G EAI L +M G ++VT+ VL A A+++ GR++
Sbjct: 324 RDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREI 383
Query: 301 HSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H+ ++ G V N+V+ Y KC E ++ F+ M D VSWNA+I + +
Sbjct: 384 HARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSK 443
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN-VVIGS 418
+ +A+EL M EG N +T ++L + ++ +Q H GF N +G+
Sbjct: 444 FQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGN 503
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ--HGLGREALEIYSMMQENKI 476
++V+MYA+CG L DA+K FD L K LV+W+ +L YAQ G GR A + + M+ I
Sbjct: 504 SVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGI 563
Query: 477 KPNDNTFIGVLSACVHIGLVEEG 499
KP + TF+ L AC + +E G
Sbjct: 564 KPGEVTFVSALDACAAMATLEHG 586
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/473 (30%), Positives = 250/473 (52%), Gaps = 1/473 (0%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY K +R+ DA +FD + +NV SW+ +++ +SQ G AL F M P+
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
+V A+ ACA+ G+ G++IH + SGL N +SN L+NMYGKC + A+ VFD L
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
R+ +SW ++L+ Y Q G L+ GV ++ + +++ CA L L +G +
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
IH + LE D + L+++Y C D VFS + + W+ +I G +Q G+
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
E + +F KM G+ +EVT+ ++ ++ G + + I++ F S T +A +
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
++ Y +C +L+ + + M + DVV+WNA++ + EAI LL+ M EG N
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSALVDMYAKCGRLNDARKVF 437
TY ++L +++ A+ G++ H ++ G V +G++++ MY KCG+ A VF
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ + K+ VSWN ++ + ++ALE++ M+ ++ N+ T + +L AC
Sbjct: 421 EAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEAC 473
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 223/438 (50%), Gaps = 3/438 (0%)
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MYGKC ++ A VFD +N SW ++++Y Q G + L++F + G +
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
L ACA G L G QIHS V L + ++ L+N+Y KC+ + A +VF +
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
L D+ +W+A++ YAQ G +A++ +M + G+ P++VTF ++ A ++ GR+
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H II G + N ++ Y C ++ F M + V+ W +IAG +
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
Y E + + + M EG N TY +++ + ++ A++ G+ I++ F S+ ++ ++
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+ +Y +CG L+ A+ + +H+ +++V+WN M+ AQ+G EA+ + M N
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA-SVVHLFACRGQTRRAYEF 538
T++ VL AC ++ + +G ++ + G+ R + SV+ ++ GQT A
Sbjct: 361 KVTYLSVLEACANLEALSQG-REIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSV 419
Query: 539 IKSSPIEPNKVVWRCLLS 556
++ P + V W +++
Sbjct: 420 FEAMP-RKDDVSWNAVIN 436
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 179/521 (34%), Positives = 296/521 (56%), Gaps = 8/521 (1%)
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N +++ Y K GL+S A +FD + +R+ SW +LS + + GL F+ R S V
Sbjct: 85 NTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVR 144
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
F+ A ++ C +L G Q+H+ + K + D F+ L+ +YA+ ++ A +V
Sbjct: 145 PDNFTYAIIIPCC----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKV 200
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F + L W+A+I Y++ G+ ++I LF ++ G+ E T++ VL FA +
Sbjct: 201 FDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQV 260
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
Q+HSLII+ GF S F N +++ YSKC + + + F+E+ + DVVSW +I G
Sbjct: 261 FEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGF 320
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG-FDSN 413
L S H EA+ L M PN +T+ +L +D A + G+ H ++K G ++
Sbjct: 321 LQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGAD 380
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS---M 470
VV+GSA+VDMY+KCG + DA + F + +++ SWN ++ GYAQ+G G +AL++Y+ +
Sbjct: 381 VVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVL 440
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
+ + I PN+ TF+GVL AC H GL++EG+ YF M+ H I P +H +V L G
Sbjct: 441 LGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAG 500
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN 590
+ A I + PI+P+ V+W LL CK H D+ + R AE + + +P ++S +++L+N
Sbjct: 501 LLQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLAN 560
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
Y + W E ++R++M+ + ++K GCSW E+ MH F
Sbjct: 561 SYTDIGEWGEAVEIREVMEARGVEKTAGCSWVEIGTCMHSF 601
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 148/510 (29%), Positives = 247/510 (48%), Gaps = 26/510 (5%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
P+V++YN +L Y KF +++A KLFD +R+ SW+ ++SG + L +F
Sbjct: 78 QPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMK 137
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M C + P+ +TY + C D G+++H + + +L++ + L+ MY + G
Sbjct: 138 MRCSSVRPDNFTYAIIIPCC----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGE 193
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ A+ VFD R ++W +++S Y + G + +F + G++ E++ A VL
Sbjct: 194 IGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNE 253
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
A + MQ+HSL+ + D+F L+NLY+KC + ASR+F I D+ +W
Sbjct: 254 FAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSW 313
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ +I G+ Q G EA+ LF +M + P+ TF +LGA AD GR H L++K
Sbjct: 314 TVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLK 373
Query: 307 MG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
G + V + V+D YSKC + ++L+ F EM E D+ SWN +I G+ + +A++
Sbjct: 374 FGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALK 433
Query: 366 LLKDMLF---EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA--- 419
L +M+ G PN T+ +L S ++ G K D +++ +A
Sbjct: 434 LYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYS----YFKEMVDKHLIKPTAEHY 489
Query: 420 --LVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG----LGREALEIYSMMQ 472
+VD+ + G L +A + L K + V W +L HG R A +Y+
Sbjct: 490 TCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNEP 549
Query: 473 ENK----IKPNDNTFIGVLSACVHIGLVEE 498
N + N T IG V I V E
Sbjct: 550 RNSSNYVLLANSYTDIGEWGEAVEIREVME 579
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 130/262 (49%), Gaps = 16/262 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF + T N L+ +Y K + A +LF+E+P+++V+SW+ +I GF Q G E A
Sbjct: 270 IIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEA 329
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNCLIN 119
+ F M +EPN +T+ G + ACA + G+ HG + + G L + V + +++
Sbjct: 330 MWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVD 389
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF---LLSRKSGVAIS 176
MY KCG + A F ER+ SW ++ Y Q G + LK++ +L SG+A +
Sbjct: 390 MYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPN 449
Query: 177 EFSCASVLGACAVLGNLKVG------MQIHSLVFKCALEFDKFV-AMGLINLYAKCEKLD 229
E + VL AC+ G LK G M L+ A + V +G L + E L
Sbjct: 450 EVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALI 509
Query: 230 LASRVFSNIQLPDLTAWSALIG 251
LA + PD W AL+G
Sbjct: 510 LALPI-----KPDNVMWGALLG 526
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H +VK G ++V + L+ Y L+DA K+ + ++VS+NT+L GY + GL
Sbjct: 38 HASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGLV 97
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
EA++++ + K + +++ VLS CV + EG +F M
Sbjct: 98 SEAIKLF----DGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKM 138
>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
Length = 800
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 193/634 (30%), Positives = 335/634 (52%), Gaps = 25/634 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I SG ++ T N+++ Y K I A K+FDE +R+ +SW+ +I+G G E AL
Sbjct: 26 IKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNFETAL 85
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ + M + Y++ + A G G+++H + + G E N + L++MY
Sbjct: 86 EFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSALLDMY 145
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + A VF + RNS++W +L+S Y G+ + GV I + + A
Sbjct: 146 AKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEIDDGTFA 205
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN-IQL 240
+L K+ Q+H+ + K L D V +I Y++C ++ A RVF I+
Sbjct: 206 PLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIET 265
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL W++++ Y + EA +LF++M G P T++ V+ A + G+ L
Sbjct: 266 RDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQGKSL 325
Query: 301 HSLIIKMGFSSFTFVANTVLDFY--SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
H L+IK G ++N+++ Y S + ++E+L F+ ++ D VSWN+++ G S
Sbjct: 326 HGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSG 385
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+A++ ++M + + Y +S +L SD+ ++ G+Q H
Sbjct: 386 LSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVL-------------- 431
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
CG + DARK FD + ++WN+++ GYAQHG G+ AL+++ +M++ ++K
Sbjct: 432 --------CGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKL 483
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ VL+AC HIGLVEEGW + SM D+GI PRM+H A ++ L G+ A
Sbjct: 484 DHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKAL 543
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I++ P EP+ +VW+ LL C+T D+ L A +L +PE+ +++LS+++ W
Sbjct: 544 IEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRW 603
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
+E A ++++MKE+ +KK G SW E++N++H F+
Sbjct: 604 NEKASIKRLMKERGVKKVPGWSWIEVKNEVHSFN 637
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 217/457 (47%), Gaps = 27/457 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ NV + LL MY K R+ DA ++F + RN ++W+ALISG++ +G A
Sbjct: 126 IVKIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTA 185
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
M +E + T+ ++ + ++H ++ + GL ++ V N +I
Sbjct: 186 FWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITA 245
Query: 121 YGKCGLLSSAQFVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y +CG + A+ VFD ++E R+ ++W S+L++Y + ++FL + G ++
Sbjct: 246 YSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYT 305
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK--CEKLDLASRVFSN 237
SV+ A + G +H LV K LEF ++ LI +Y K + +D A +F +
Sbjct: 306 YTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFES 365
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
++ D +W++++ G++Q G + +A+ F M S ++ FS VL + +D+ G
Sbjct: 366 LENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLG 425
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+Q+H L C ++E++ K+FD + ++WN+LI G+
Sbjct: 426 QQVHVL----------------------CGVIEDARKSFDATPKDSSIAWNSLIFGYAQH 463
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVI 416
A++L M + T+ +L S I +E G + G +
Sbjct: 464 GRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEH 523
Query: 417 GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
+ ++D+ + GRL++A+ + + + + + W T+L
Sbjct: 524 YACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLL 560
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 107/183 (58%)
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L IK G ++ + AN ++ Y+KC + + K FDE + D VSWN +IAG + ++
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNF 81
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A+E LK M G + Y++ +IL + + +E G+Q H IVK G++ NV GSAL
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSAL 141
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMYAKC R+ DA +VF ++ +N V+WN ++ GYA G A + M+ ++ +D
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEIDD 201
Query: 481 NTF 483
TF
Sbjct: 202 GTF 204
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
S A+ HC +K G +++ + ++ YAKCG + A K+FD S ++ VSWN
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWN 69
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
TM+ G G ALE M+ + +F +L +G VE G +SMI
Sbjct: 70 TMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVG-QQVHSMIVK 128
Query: 510 HGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G + ++++ ++A + A+E KS I N V W L+SG
Sbjct: 129 IGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIR-NSVTWNALISG 175
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 195/653 (29%), Positives = 334/653 (51%), Gaps = 72/653 (11%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ Y + + +++FD M ++NV W+ ++S +++IG + ++ F++MV
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMV------- 192
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
K I G+ S EL FD
Sbjct: 193 -------------------EKGIEGKRPESAFEL------------------------FD 209
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+R+ ISW S++S Y G GL I+ G+ + + SVL CA G L +
Sbjct: 210 KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSL 269
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +HSL K + E + L+++Y+KC LD A RVF + ++ +W+++I GY +
Sbjct: 270 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G++ AI L +M G+ V + +L A A G+ +H I S FV
Sbjct: 330 DGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFV 389
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
N ++D Y+KC +E + F M D++SWN +I G L
Sbjct: 390 CNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-GELK------------------- 429
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+ T + +L + + A+E GK+ H I++ G+ S+ + +ALVD+Y KCG L AR
Sbjct: 430 -PDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+FD + SK+LVSW M+ GY HG G EA+ ++ M++ I+P++ +FI +L AC H GL
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+E+GW +F M D I P+++H A +V L + G +AYEF+++ PI P+ +W LL
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALL 608
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
GC+ + D+ L AE++ +PE+T +++L+N+YAEA W+E ++R+ + ++ L+K
Sbjct: 609 CGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRK 668
Query: 616 DTGCSWTELQNKMHYF-STSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
+ GCSW E++ K++ F S + + ++ ++ ++ + + G+ P Y+
Sbjct: 669 NPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYA 721
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 226/452 (50%), Gaps = 25/452 (5%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F ++ + ++ ++ R A +LFD++ +R+VISW+++ISG+ G+ E L ++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M+ ++ + T + + CA+ G GK +H +S E + SN L++MY KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L A VF+ ERN +SW S+++ Y + G +K+ K GV + + S+L
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILH 360
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
ACA G+L G +H + +E + FV L+++YAKC ++ A+ VFS + + D+ +
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIIS 420
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ +IG L P T + VL A A + G+++H I+
Sbjct: 421 WNTMIG---------------------ELKPDSRTMACVLPACASLSALERGKEIHGYIL 459
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
+ G+SS VAN ++D Y KC +L + FD + D+VSW +IAG+ + EAI
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIA 519
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--SALVDM 423
+M G P+ ++ +IL S +E G + I+K F+ + + +VD+
Sbjct: 520 TFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDL 578
Query: 424 YAKCGRLNDARKVFDHLS-SKNLVSWNTMLVG 454
++ G L+ A + + L + + W +L G
Sbjct: 579 LSRTGNLSKAYEFMETLPIAPDATIWGALLCG 610
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 198/425 (46%), Gaps = 46/425 (10%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I S F + N LL MY K ++ A ++F++M ERNV+SW+++I+G+++ G + A+
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M ++ + + ACA G +GK++H + + +E N V N L++MY
Sbjct: 338 KLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMY 397
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + +A VF + ++ ISW +++ GE + + A
Sbjct: 398 AKCGSMEAANSVFSTMVVKDIISWNTMI------GE---------------LKPDSRTMA 436
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
VL ACA L L+ G +IH + + D+ VA L++LY KC L LA +F I
Sbjct: 437 CVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 496
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
DL +W+ +I GY G EAI F +M +G+ P EV+F +L A + H
Sbjct: 497 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS-----------H 545
Query: 302 SLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSWN 348
S +++ G+ F + N ++D S+ L ++ + + + D W
Sbjct: 546 SGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWG 605
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
AL+ G + H E E + + +FE N Y + NI ++ E K+ I K
Sbjct: 606 ALLCG-CRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQ 664
Query: 409 GFDSN 413
G N
Sbjct: 665 GLRKN 669
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 135/528 (25%), Positives = 233/528 (44%), Gaps = 83/528 (15%)
Query: 38 ERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE 97
+ V ++A I F Q+G E A+ + +C E TY + CA GK+
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMEL--ICMCQKSELETKTYGSVLQLCAGLKSFTDGKK 120
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
+H S ++ NS + + G GL L+S Y CG+
Sbjct: 121 VH-----SIIKSNS------VGVDGALGL--------------------KLVSFYATCGD 149
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
G ++F K V + F ++ A +G+ K + + ++ + +E
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNF----MVSEYAKIGDFKESICLFKIMVEKGIE-------- 197
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
++ + A +F + D+ +W+++I GY G + ++ +M G+
Sbjct: 198 -------GKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVD 250
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
T VL A+ G+ +HSL IK F +NT+LD YSKC L+ +L+ F+
Sbjct: 251 LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 310
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
+M E +VVSW ++IAG+ AI+LL+ M EG ++ ++IL+ + +++
Sbjct: 311 KMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDN 370
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
GK H I +SN+ + +AL+DMYAKCG + A VF + K+++SWNTM+
Sbjct: 371 GKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI----- 425
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
++KP+ T VL AC + +E G ++R+ S R
Sbjct: 426 ----------------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDR-- 467
Query: 518 HIA-SVVHLF---ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
H+A ++V L+ G R ++ I S + V W +++G H
Sbjct: 468 HVANALVDLYVKCGVLGLARLLFDMIPSKDL----VSWTVMIAGYGMH 511
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 5/157 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ + N L+ +YVK + A+ LFD +P ++++SW+ +I+G+ G A
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
+ F M +EP+ +++ + AC+ G G M +E C+++
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVD 577
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQC 155
+ + G LS A +F+ + ++ W +LL C C
Sbjct: 578 LLSRTGNLSKAYEFMETLPIAPDATIWGALL---CGC 611
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/649 (30%), Positives = 340/649 (52%), Gaps = 24/649 (3%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V + L+ MY + + DA +LFDEMPER+V++W+A+ISG G L+Y MV
Sbjct: 144 SVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMV 203
Query: 69 CCV----LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
PN T + AC G+ G +HG ++G+ V + L +MY KC
Sbjct: 204 RSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKC 263
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
A+ +F E++ +SW SL+ +YC+ G +++FL +SG+ E + +L
Sbjct: 264 DSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLL 323
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
++ G H+ + + + LI++YAKC+++D+A+ VF + D
Sbjct: 324 AGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTD 383
Query: 245 AWSALIGGYAQLGKACEAIDLFVKM---------FSSGLMPSEVTFSYVLGAFADVKETI 295
+WS+++ Y + G + ++L+ +M + + + S ++ LG
Sbjct: 384 SWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRL----- 438
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+ H IK + VAN ++ Y +C + + K F + DVV+W+ALI+ +
Sbjct: 439 -GQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYS 497
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
H +A+ L ML EG PN T ++++ +++ A+E G+ H + G + ++
Sbjct: 498 HLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLS 557
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
I +ALVDMY KCG+L ARK+FD + +++V+WN M+ GY HG +AL+++SMM+
Sbjct: 558 ICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGN 617
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+KPN TF+ +LSAC H GLV++G F M ++ + P + H A +V L G + A
Sbjct: 618 VKPNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEA 676
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
+ + + PIEP+ +W LL CK H + +G A+K ++DPE+ +I++SN Y A
Sbjct: 677 EDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSA 736
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTE----LQNKMHYFSTSRFAQFQ 640
W+E K+R +MK ++K G S + ++N++ + S F Q +
Sbjct: 737 EKWNEIEKLRDMMKNHGVEKSIGWSTIDICGFMKNQLTQWQHSLFEQSE 785
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 170/358 (47%), Gaps = 8/358 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ F +V+ N L+ MY K +++ A +F + +R+ SWS+++ + + G+
Sbjct: 342 IVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKC 401
Query: 61 LNYFRLMVCCVLEPNYYTY-----VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
L +R M + + + Y + +S+C+ G R G+ H + NS V+N
Sbjct: 402 LELYREMQ--FRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVAN 459
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
LI+MYG+CG A+ +F ++ ++W +L+SSY G L ++ GV
Sbjct: 460 ALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKP 519
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ + SV+ +CA L L+ G IHS V LE D + L+++Y KC +L +A ++F
Sbjct: 520 NSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMF 579
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
++ D+ W+ +I GY G+A +A+ LF M + P+ +TF +L A
Sbjct: 580 DSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVD 639
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIA 352
GR+L + + + ++D K L+E+ M E D W L+
Sbjct: 640 KGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLG 697
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 148/317 (46%), Gaps = 7/317 (2%)
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H+L L A L++ Y+ LA+ F+ PD W++L+ +
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF---SSFTFV 315
+ +M +SG PS T V A A++ G +H+ ++ G V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE-- 373
A++++ Y++C + ++++ FDEM E DVV+W A+I+G + + GE + L M+
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 374 --GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
G PN T + L + + G H VK G + S+L MY KC
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
DAR +F L K+LVSW +++ Y + G +A+E++ M+E+ ++P++ +L+
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327
Query: 492 HIGLVEEGWHYFNSMIR 508
+ V G + +++R
Sbjct: 328 NDAKVRGGKTFHAAIVR 344
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 155/374 (41%), Gaps = 62/374 (16%)
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH+L + G S A ++ YS L + F D WN+L+ +
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF---DSNVVI 416
+ + + M G P+ +T + + ++++ A+ G H V+ G D +V +
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM----Q 472
S+LV MYA+CG + DA ++FD + +++V+W ++ G +G E L M
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV-HLFA---- 527
+ +PN T L AC +G + G + + G+ + H SVV LF+
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVG-----TCLHGFGVKAGVGHCPSVVSSLFSMYTK 262
Query: 528 -----------------------------CR-GQTRRAYEF---IKSSPIEPNKVVWRCL 554
CR G +A E ++ S ++P++VV CL
Sbjct: 263 CDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCL 322
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN----VYAEANMWDETAKVRKIMKE 610
L+G + G+ I+ + D+ +++ N +YA+ D A V +++ +
Sbjct: 323 LAGLGNDAKVRGGKTFHAAIVRRNFGDS---VLIGNALISMYAKCKQVDIAATVFRMLHQ 379
Query: 611 KSLKKDTGCSWTEL 624
+DT SW+ +
Sbjct: 380 ----RDTD-SWSSM 388
>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 201/618 (32%), Positives = 322/618 (52%), Gaps = 6/618 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G V LL +Y+K R++ A FD MP R+V+SW+ALI G+S+ G A
Sbjct: 468 LIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSA 527
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ P T VG + +C GK IHG +SGL L+ V N L +M
Sbjct: 528 LELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSM 587
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L +A+++F+ ++++ +SW +++ +Y Q G + +F +GV +S+ +
Sbjct: 588 YAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTI 647
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+ A A N + IH K L D V LI +YA+ D A ++ ++
Sbjct: 648 MSLPSANA---NPE---SIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQ 701
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L + +A+I YA+ G ++ F +M + P V +L AD G
Sbjct: 702 KNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVF 761
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H IK G +F V N ++ YSK +E F M E ++SWN++I+G + +
Sbjct: 762 HGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRA 821
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
AIEL M G P+ T +++L+ S + +++G++ H I++ + +G+AL
Sbjct: 822 SHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTAL 881
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MY KCG + A +VF + L +WN M+ GY+ +G +AL YS MQE ++P+
Sbjct: 882 IHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPDK 941
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+GVL+AC H GL+ EG YF M + + + P + H A +V L A G A FIK
Sbjct: 942 ITFLGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLFIK 1001
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+ EP+ VW LS C H+++ LG Y A+K+ D + ++++SN+YA WD+
Sbjct: 1002 NMEKEPDSAVWGAFLSACCIHQEVKLGEYLAKKLYLLDCRNGGLYVLMSNLYAVTGRWDD 1061
Query: 601 TAKVRKIMKEKSLKKDTG 618
A+VR++MK+ ++G
Sbjct: 1062 VARVREMMKDAGGDGNSG 1079
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 215/463 (46%), Gaps = 12/463 (2%)
Query: 97 EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
+I + + G++ +VS L+++Y K G +S A FD R+ +SW +L+ Y + G
Sbjct: 463 QIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNG 522
Query: 157 EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
L++F+ K G + + +L +C L + G IH K L D V
Sbjct: 523 YDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKN 582
Query: 217 GLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
L ++YAKC L+ A +F + + +W+ +IG Y Q G EA+ +F +M +G+
Sbjct: 583 ALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEV 642
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
S+VT + A A+ + +H IK+G + V +++ Y++ + + +
Sbjct: 643 SQVTIMSLPSANANPES------IHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLY 696
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
+ + ++VS A+I + + + G +E M P+ +IL+ +D I
Sbjct: 697 WSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHIC 756
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G H +K G D+ ++ + L+ MY+K + +F + K L+SWN+++ G
Sbjct: 757 IGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCV 816
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
Q G A+E++ M+ + P+ T +LS C +G ++ G + ++R+ M
Sbjct: 817 QAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRN---KLEM 873
Query: 517 DHI--ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ +++H++ G A KS +P W ++SG
Sbjct: 874 EDFVGTALIHMYTKCGSIVHAERVFKSIG-KPCLATWNAMISG 915
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 151/300 (50%), Gaps = 9/300 (3%)
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
+QI + + K ++ +V+ L++LY K ++ A F + + D+ +W+ALI GY++
Sbjct: 462 IQIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRN 521
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
G A++LFV+M G P + T +L + ++ G+ +H IK G V
Sbjct: 522 GYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVK 581
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
N + Y+KC LE + F+EM + VVSWN +I + + + EA+ + K M+ G
Sbjct: 582 NALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVE 641
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
+ T ++ + +++ +I HC +K G + + ++L+ MYA+ G + A +
Sbjct: 642 VSQVTIMSLPSANANPESI------HCYTIKVGLADDASVVTSLICMYARYGSTDHAELL 695
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC---VHI 493
+ L KNLVS ++ YA+ G +E +S M + +KP+ + +L VHI
Sbjct: 696 YWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHI 755
>gi|449527015|ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 211/660 (31%), Positives = 350/660 (53%), Gaps = 42/660 (6%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+ N+I+ N + +V+ ++ AQ LF+EMP R+V+SW+ +ISG+S+ G ALN
Sbjct: 34 NSNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSVVSWNIMISGYSKFGKYSEALNLASE 93
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M C ++ N T+ +S CA G + GK+ H + +SGL++ V + L+ Y
Sbjct: 94 MHCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANIND 153
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCG------------------------------ 156
+S A+ VFD ++N + W LL Y +C
Sbjct: 154 ISGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARS 213
Query: 157 EH--VHGLKIFLLSRKSG-VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
EH GL++F R +G V +EF+ SV+ AC + L G +H ++ K FD
Sbjct: 214 EHNCKRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHS 273
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
V LI Y +CE +D A V+ +++ P L A ++L+ G G+ +A ++F K+
Sbjct: 274 VCSALILFYCQCEAIDSAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLRE-- 331
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ V+++ +L +A G ++L + SS NT++ YS+ ++++
Sbjct: 332 --KNPVSYNLMLKGYATSGRIEGSKRLFERMTHKTTSSL----NTMISVYSRNGEIDKAF 385
Query: 334 KTFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
K F+ + E D V+WN++I+G++ + + A++L M + T+S + + +
Sbjct: 386 KLFESVKSEGDPVTWNSMISGYIQNHQHEGALKLYITMCRTSVERSRSTFSALFQACTCL 445
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
I+ G+ H ++ FDSNV +G++L+DMYAKCG + DA+ F + N+ ++ ++
Sbjct: 446 EYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCLPNVAAFTALI 505
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
GY HGLG EA ++ M ++K+ PN T +G+LSAC G+V+EG F+SM + +G+
Sbjct: 506 NGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTVFHSMEKCYGV 565
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
P ++H A VV L G+ A FI+ PIE ++V+W LL+ C DL LG A+
Sbjct: 566 IPTLEHYACVVDLLGRSGRLYEAEAFIRCMPIEADRVIWGALLNACWFWMDLELGESVAK 625
Query: 573 KILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
K+LS DP+ SA+I+LSN+YA+ W E VR+ + +KK GCSW ++ NK FS
Sbjct: 626 KVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRKLMSLKVKKIRGCSWIDVNNKTCVFS 685
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 142/285 (49%), Gaps = 11/285 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GFH + + L+L Y + I+ A+ ++D M + + ++L+ G G A F
Sbjct: 267 GFHFDHSVCSALILFYCQCEAIDSAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIF 326
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM-YRSGLELNSHVSNCLINMYGK 123
C + E N +Y + A+ G K + RM +++ LN+ +I++Y +
Sbjct: 327 ----CKLREKNPVSYNLMLKGYATSGRIEGSKRLFERMTHKTTSSLNT-----MISVYSR 377
Query: 124 CGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
G + A +F++ E + ++W S++S Y Q +H LK+++ ++ V S + ++
Sbjct: 378 NGEIDKAFKLFESVKSEGDPVTWNSMISGYIQNHQHEGALKLYITMCRTSVERSRSTFSA 437
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+ AC L +++G +H + A + + +V LI++YAKC + A F+++ LP+
Sbjct: 438 LFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCLPN 497
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ A++ALI GY G EA +F +M + P+ T +L A
Sbjct: 498 VAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSA 542
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I F NV L+ MY K I DAQ F + NV +++ALI+G+ G+ A
Sbjct: 459 IREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCLPNVAAFTALINGYVHHGLGIEAF 518
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
+ F M+ + PN T +G +SAC+ G + G + M + G+ C++++
Sbjct: 519 SVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTVFHSMEKCYGVIPTLEHYACVVDL 578
Query: 121 YGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
G+ G L A+ F+ +E + + W +LL++
Sbjct: 579 LGRSGRLYEAEAFIRCMPIEADRVIWGALLNA 610
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 200/652 (30%), Positives = 345/652 (52%), Gaps = 4/652 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + + LL MY + ++DA+K+FD MP R++++WS L+S + A
Sbjct: 685 IIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKA 744
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ MV +EP+ T + V CA G R + +HG++ R + + + N L+ M
Sbjct: 745 LRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTM 804
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L S++ +F+ ++N++SW +++SSY + L+ F KSG+ + +
Sbjct: 805 YSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTL 864
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFD-KFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L +C + G ++ G +H + L+ + + ++ L+ LYA+C +L + +
Sbjct: 865 YSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVG 924
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ W++ I YA G EA+ LF +M + + P T + ++ A + G+Q
Sbjct: 925 DRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQ 984
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +I+ S FV N+V+D YSK + + FD++ +V+WN+++ G + +
Sbjct: 985 IHGHVIRTDVSD-EFVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGN 1043
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EAI L M N T+ ++ S I ++E G+ H ++ G ++ +A
Sbjct: 1044 SLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWVHHKLIVCGI-KDLFTDTA 1102
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+DMYAKCG LN A VF +S++++VSW++M+ Y HG A+ ++ M E+ KPN
Sbjct: 1103 LIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPN 1162
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ F+ VLSAC H G VEEG +YFN +++ G+SP +H A + L + G + AY I
Sbjct: 1163 EVVFMNVLSACGHSGSVEEGKYYFN-LMKLFGVSPNSEHFACFIDLLSRSGDLKEAYRTI 1221
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
K P + VW L++GC+ H+ + + + I +DT + +LSN+YAE W+
Sbjct: 1222 KEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDISDIVTDDTGYYTLLSNIYAEEGEWE 1281
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
E ++R MK +LKK G S E+ K+ F FQ +++ + L
Sbjct: 1282 EFRRMRSAMKSLNLKKVPGYSAIEIDKKVFRFGAGEETCFQTEEIYMFLGNL 1333
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 259/501 (51%), Gaps = 3/501 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++T + + L+ Y + ++ +F+ P + + LI + + A
Sbjct: 583 LVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAA 642
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACA-SRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
++ + +V + + + + + ACA SR G+++HGR+ +SG++ ++ + L+
Sbjct: 643 IDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLC 702
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MYG+ G LS A+ VFD R+ ++W +L+SS + E + L++F GV +
Sbjct: 703 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVT 762
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV+ CA LG L++ +H + + +FD+ + L+ +Y+KC L + ++F I
Sbjct: 763 MISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIA 822
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+A+I Y + + +A+ F +M SG+ P+ VT +L + G+
Sbjct: 823 KKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKS 882
Query: 300 LHSLIIKMGFS-SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H I+ ++ ++ +++ Y++C L + + + ++V WN+ I+ +
Sbjct: 883 VHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRG 942
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA+ L + M+ P+ +T ++I++ + + GKQ H +++ S+ + +
Sbjct: 943 MVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDV-SDEFVQN 1001
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+++DMY+K G +N A VFD + +++V+WN+ML G++Q+G EA+ ++ M + ++
Sbjct: 1002 SVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEI 1061
Query: 479 NDNTFIGVLSACVHIGLVEEG 499
N TF+ V+ AC IG +E+G
Sbjct: 1062 NKVTFLAVIQACSSIGSLEKG 1082
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 206/458 (44%), Gaps = 36/458 (7%)
Query: 192 NLKVGMQIHS-LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
+L++ Q+H+ L+ L D LI YA D + VF PD + LI
Sbjct: 571 SLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLI 630
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQLHSLIIKMGF 309
AIDL+ ++ S S+ F VL A A +E + GR++H IIK G
Sbjct: 631 KCNVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGV 690
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
+ ++L Y + L ++ K FD M D+V+W+ L++ L +C +A+ + K
Sbjct: 691 DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKC 750
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M+ +G P+ T +++ +++ + + H I + FD + + ++L+ MY+KCG
Sbjct: 751 MVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGD 810
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L + K+F+ ++ KN VSW M+ Y + +AL +S M ++ I+PN T +LS+
Sbjct: 811 LLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSS 870
Query: 490 CVHIGLVEEGWHYFNSMIRD------HGISP----------RMDHIASVVH--------- 524
C GL+ EG IR +SP R+ +++H
Sbjct: 871 CGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVL 930
Query: 525 ------LFACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL 575
L+A RG A + + + I+P+ ++S C+ + LG+ ++
Sbjct: 931 WNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVI 990
Query: 576 STDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
TD D + ++Y+++ + V +K +S+
Sbjct: 991 RTDVSDEFVQNSVIDMYSKSGFVNLACTVFDQIKHRSI 1028
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/596 (29%), Positives = 327/596 (54%), Gaps = 12/596 (2%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
YV + C G + +HG M ++G + V+ L+N Y +CG A+ +FD
Sbjct: 81 YVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMP 140
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
E+N ++W +L++ Y + + L++F+ ++G S ++ ++L AC+ N +G Q
Sbjct: 141 EKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQ 200
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H K + L +YAK L+ A R F + ++ W+ +I A+
Sbjct: 201 VHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDEN 260
Query: 259 ACE-AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
E + LF+ M G++P+E T + V+ + G+Q+ + K+G + V N
Sbjct: 261 YTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKN 320
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL-----------ASCHYGEAIEL 366
+ + Y + +E+++ F+EMD+ +++WNA+I+G+ A +A+++
Sbjct: 321 STMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKV 380
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+++ P+L+T+S+IL++ S + A+E G+Q H +K GF S+VV+ SALV+MY K
Sbjct: 381 FRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNK 440
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + DA K F +S + LV+W +M+ GY+QHG +EA++++ M+ ++PN+ TF+ V
Sbjct: 441 CGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCV 500
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC + GL E+ HYF+ M ++ I P +DH +V +F G+ A+ FI+ + EP
Sbjct: 501 LSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEP 560
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
N+ +W L++GC++H ++ L YAA++++ P+ +++L N+Y W + A+VRK
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRK 620
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+MK++ L SW +++K+++F + +L++++ L GY P
Sbjct: 621 LMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLENLLEKAKTIGYEP 676
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 148/555 (26%), Positives = 266/555 (47%), Gaps = 30/555 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ +G ++ L+ Y++ DA+ LFD+MPE+NV++W+ALI+G++ A
Sbjct: 104 MVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEA 163
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ P++YT ++AC++ +A G ++HG + + + N L M
Sbjct: 164 LEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRM 223
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH-GLKIFLLSRKSGVAISEFS 179
Y K G L SA F ++N I+W +++S+ + + GL +FL GV +EF+
Sbjct: 224 YAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFT 283
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV+ C +L +G Q+ + FK + + V + LY + + D A R F +
Sbjct: 284 LTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMD 343
Query: 240 LPDLTAWSALIGGYAQL-----------GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
+ W+A+I GYAQ+ + +A+ +F + S + P TFS +L
Sbjct: 344 DVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVC 403
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ + G Q+H+ IK GF S V + +++ Y+KC +E++ K F EM +V+W
Sbjct: 404 SSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWT 463
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
++I+G+ EAI+L +DM F G PN T+ +L+ S E + + ++K
Sbjct: 464 SMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEH-YFDMMKE 522
Query: 409 GFDSNVVIG--SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREAL 465
+ ++ +VDM+ + GRL+DA N W++++ G H G L
Sbjct: 523 EYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSH--GNMEL 580
Query: 466 EIYSMMQENKIKPND-NTFIGVLSACVHIGLVEEGWH---YFNSMIRDHGISPRMDH--- 518
Y+ + +++P T++ +L ++ + E WH +++ G+ MD
Sbjct: 581 AFYAADRLIELRPKGIETYVLLL----NMYISNERWHDVARVRKLMKQEGLGVLMDRSWI 636
Query: 519 -IASVVHLFACRGQT 532
I V+ F +T
Sbjct: 637 TIKDKVYFFKANDKT 651
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 200/434 (46%), Gaps = 45/434 (10%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
+ G + +L C G+L +H + K D FVA L+N Y +C
Sbjct: 71 REGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQ 130
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A +F + ++ W+ALI GY + EA+++FV+M +G PS T +L A +
Sbjct: 131 DARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACS 190
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
G Q+H IK S T + N++ Y+K LE +++ F + + +V++W
Sbjct: 191 ASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTT 250
Query: 350 LIAGHLASCHYGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
+I+ +Y E + L DML +G PN +T ++++++ + GKQ K
Sbjct: 251 MISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKI 310
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ---------HG 459
G +N+ + ++ + +Y + G ++A + F+ + ++++WN M+ GYAQ H
Sbjct: 311 GCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHA 370
Query: 460 LGR--EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
R +AL+++ ++ + +KP+ TF +LS C + +E+G I+ +S +
Sbjct: 371 RSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVV 430
Query: 518 HIA------------------------------SVVHLFACRGQTRRA---YEFIKSSPI 544
+ A S++ ++ G+ + A +E ++ + +
Sbjct: 431 NSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGV 490
Query: 545 EPNKVVWRCLLSGC 558
PN++ + C+LS C
Sbjct: 491 RPNEITFVCVLSAC 504
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 8/199 (4%)
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
GEA+ +L+ EG Y +L++ + ++ + H +VK G +++ + ++L
Sbjct: 64 GEAMAMLR----EGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSL 119
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V+ Y +CG DAR +FD + KN+V+W ++ GY + EALE++ M E P+
Sbjct: 120 VNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSH 179
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA-SVVHLFACRGQTRRAYEFI 539
T +L+AC + G I+ +S + I S+ ++A G A
Sbjct: 180 YTLGAMLNACSASNNADLGSQVHGYTIKYRALS--ITSIGNSLCRMYAKSGSLESAMRAF 237
Query: 540 KSSPIEPNKVVWRCLLSGC 558
+ P + N + W ++S C
Sbjct: 238 RMVP-DKNVITWTTMISAC 255
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 230/694 (33%), Positives = 357/694 (51%), Gaps = 41/694 (5%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPEVALNYFR 65
P N LL Y + ++ A LF P R+ +S+++LIS AL+ R
Sbjct: 83 PTPAVSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALR 142
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDA--RSGKEIHGRMYRSGLELNSHVS---NCLINM 120
M+ E + +T V + AC+ D R G+E H + G N L++M
Sbjct: 143 DMLA-DHEVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSM 201
Query: 121 YGKCGLLSSAQFVFDASLER--NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
Y + GL+ AQ +F +S + ++W +++S Q G +++ GV
Sbjct: 202 YARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGV 261
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ AS L AC+ L L VG ++H+ V K L + FVA L+++YA E++ A RVF
Sbjct: 262 TFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDM 321
Query: 238 IQLPD----LTAWSALIGGYAQLGKACE-AIDLFVKMFS-SGLMPSEVTFSYVLGAFADV 291
+ P+ L W+A+I GYAQ G E AI+LF +M + +G PSE T + VL A A
Sbjct: 322 V--PEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARS 379
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
+ G +H ++K +S FV N ++D Y++ ++E+ F +D D+VSWN LI
Sbjct: 380 EVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLI 439
Query: 352 AGHLASCHYGEAIELLKDM-----------LFEG--------HC-PNLYTYSNILNISSD 391
G + EA +L+++M + EG C PN T +L +
Sbjct: 440 TGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAV 499
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ A GK+ H V+ +S++ +GSALVDMYAKCG L AR VFD L +N+++WN +
Sbjct: 500 LAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVL 559
Query: 452 LVGYAQHGLGREALEIYSMMQEN-KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
++ Y HGLG EAL ++ M N + PN+ TFI L+AC H GLV+ G F M RD+
Sbjct: 560 IMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDY 619
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKS-SPIEPNKVVWRCLLSGCKTHKDLVLGRY 569
G P A VV + G+ AY I S +P E W +L C+ H+++ LGR
Sbjct: 620 GFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRI 679
Query: 570 AAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMH 629
AAE++ +P++ S +++L N+Y+ A +W+ + +VR +M+++ + K+ GCSW EL +H
Sbjct: 680 AAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIH 739
Query: 630 YFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
F A + +H M+ L + GYVPD
Sbjct: 740 RFMAGESAHPESAQVHAHMDALWERMRREGYVPD 773
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 252/531 (47%), Gaps = 55/531 (10%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGL--ELNSHVSNCLINMYGKCGLLSSAQF 132
+++ A+ + A+ D+RS + IHG R L VSN L+ Y +CG L +A
Sbjct: 47 DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106
Query: 133 VFDASLE--RNSISWVSLLSSYC---QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+F A+ R+++S+ SL+S+ C + G + L+ L + +S F+ SVL AC
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADHE----VSSFTLVSVLLAC 162
Query: 188 AVLGNL--KVGMQIHSLVFKCAL---EFDKFVAMGLINLYAKCEKLDLASRVF--SNIQL 240
+ L + ++G + H+ K ++F L+++YA+ +D A R+F S +
Sbjct: 163 SHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGV 222
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL W+ +I Q G+ EA+ + M + G+ P VTF+ L A + ++ GR++
Sbjct: 223 GDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREV 282
Query: 301 HSLIIK-MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH--DVVSWNALIAGHLAS 357
H+ ++K ++ +FVA+ ++D Y+ E + + + FD + EH + WNA+I G+ +
Sbjct: 283 HAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGY--A 340
Query: 358 CHYG---EAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
H G EAIEL M E C P+ T + +L + + H +VK SN
Sbjct: 341 QHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASN 400
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ- 472
+ +AL+DMYA+ GR+++A +F + +++VSWNT++ G GL EA ++ MQ
Sbjct: 401 RFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQL 460
Query: 473 -------------------ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
+ PN+ T + +L C + G +R H +
Sbjct: 461 PSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVR-HALE 519
Query: 514 PRMDHIASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ +++V ++A C R ++ + N + W L+ H
Sbjct: 520 SDLAVGSALVDMYAKCGCLALARAVFDRLPRR----NVITWNVLIMAYGMH 566
>gi|297834340|ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330892|gb|EFH61311.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 652
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 196/589 (33%), Positives = 313/589 (53%), Gaps = 12/589 (2%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNCLINMYGKCGLLSSAQFV 133
N T + + CA R D+ SG++IHG M R G L+ + L+NMY KCGL+ A V
Sbjct: 58 NVATSIATLQRCAQRKDSVSGQQIHGFMVRKGFLDDSPRAVTSLVNMYAKCGLMRRAVLV 117
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F S ER+ + +L+S + G + + ++ R G+ +++ S+L +
Sbjct: 118 FGGS-ERDVFGYNALISGFVVNGSPLDAMDMYREMRAKGILPDKYTFPSLLKGSDAMEVS 176
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL---TAWSALI 250
V ++H+L FK D +V L+ Y+K ++ A +VF +LPD W+AL+
Sbjct: 177 DV-KKVHALAFKLGFVSDCYVGSALVTSYSKFMSVEDAQKVFD--ELPDRDDSVLWNALV 233
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
GY+ + + +A+ +F KM G+ S T + VL +F + GR +H L +KMGF
Sbjct: 234 NGYSHIFRFEDALIVFSKMREEGVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFD 293
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S V+N ++D Y K + LEE+ F+ MDE D+ +WN+++ H + + L + M
Sbjct: 294 SGIVVSNALIDLYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETM 353
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF----DSNVVIGSALVDMYAK 426
L G P++ T + +L + +++ G++ H ++ G SN I ++L+DMY K
Sbjct: 354 LCSGIRPDIVTLTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVK 413
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG L DAR VFD + K+ SWN M+ GY G AL+++S M +KP++ TF+G+
Sbjct: 414 CGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGL 473
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L AC H G V EG ++ M + I P DH A V+ + + AY+ S PI
Sbjct: 474 LQACSHSGFVNEGRNFLAQMETLYNILPTSDHYACVIDMLGRADKLEEAYDLAISMPICD 533
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
N VVWR +LS C+ H + L A +++ +PE ++++SNVY EA ++E VR
Sbjct: 534 NPVVWRSILSSCRLHGNKDLAVVAGKRLYELEPEHCGVYVLMSNVYVEAKKYEEVLDVRD 593
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
MKE+++KK GCSW LQN +H F T + +H ++ L H+
Sbjct: 594 TMKEQNVKKTPGCSWIGLQNGVHTFFTGDQTHPEFESIHGWLSLLISHM 642
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 223/478 (46%), Gaps = 32/478 (6%)
Query: 1 MITSGF---HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP 57
M+ GF P +T L+ MY K + A +F ER+V ++ALISGF G P
Sbjct: 85 MVRKGFLDDSPRAVT--SLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSP 141
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
A++ +R M + P+ YT+ + + + K++H ++ G + +V + L
Sbjct: 142 LDAMDMYREMRAKGILPDKYTFPSLLKGSDAM-EVSDVKKVHALAFKLGFVSDCYVGSAL 200
Query: 118 INMYGKCGLLSSAQFVFDASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+ Y K + AQ VFD +R +S+ W +L++ Y L +F R+ GVA+S
Sbjct: 201 VTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSHIFRFEDALIVFSKMREEGVAMS 260
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+ SVL + V G+L G IH L K + V+ LI+LY K + L+ A+ +F
Sbjct: 261 RHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDSGIVVSNALIDLYGKSKWLEEANSIFE 320
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL---GAFADVKE 293
+ DL W++++ + G + LF M SG+ P VT + VL G A +K+
Sbjct: 321 AMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIVTLTTVLPTCGRLASLKQ 380
Query: 294 TIGGRQLHSLIIKMGF----SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
GR++H +I G SS F+ N+++D Y KC L ++ FD M D SWN
Sbjct: 381 ---GREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNI 437
Query: 350 LIAGH-LASCHYGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-- 405
+I G+ + SC GE A+++ M G P+ T+ +L S + G+ +
Sbjct: 438 MINGYGVQSC--GELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFVNEGRNFLAQMET 495
Query: 406 ---VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+ P D + +DM + +L +A + + N V W ++L HG
Sbjct: 496 LYNILPTSDHYACV----IDMLGRADKLEEAYDLAISMPICDNPVVWRSILSSCRLHG 549
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 195/653 (29%), Positives = 334/653 (51%), Gaps = 72/653 (11%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ Y + + +++FD M ++NV W+ ++S +++IG + ++ F++MV
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMV------- 192
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
K I G+ S EL FD
Sbjct: 193 -------------------EKGIEGKRPESAFEL------------------------FD 209
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+R+ ISW S++S Y G GL I+ G+ + + SVL CA G L +
Sbjct: 210 KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSL 269
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +HSL K + E + L+++Y+KC LD A RVF + ++ +W+++I GY +
Sbjct: 270 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G++ AI L +M G+ V + +L A A G+ +H I S FV
Sbjct: 330 DGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFV 389
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
N ++D Y+KC +E + F M D++SWN +I G L
Sbjct: 390 CNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-GELK------------------- 429
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+ T + +L + + A+E GK+ H I++ G+ S+ + +ALVD+Y KCG L AR
Sbjct: 430 -PDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+FD + SK+LVSW M+ GY HG G EA+ ++ M++ I+P++ +FI +L AC H GL
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+E+GW +F M D I P+++H A +V L + G +AYEFI++ PI P+ +W LL
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
GC+ + D+ L AE++ +PE++ +++L+N+YAEA W+E ++R+ + ++ L+K
Sbjct: 609 CGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRK 668
Query: 616 DTGCSWTELQNKMHYF-STSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
+ GCSW E++ K++ F S + + ++ ++ ++ + + G+ P Y+
Sbjct: 669 NPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYA 721
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 226/452 (50%), Gaps = 25/452 (5%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F ++ + ++ ++ R A +LFD++ +R+VISW+++ISG+ G+ E L ++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M+ ++ + T + + CA+ G GK +H +S E + SN L++MY KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L A VF+ ERN +SW S+++ Y + G +K+ K GV + + S+L
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILH 360
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
ACA G+L G +H + +E + FV L+++YAKC ++ A+ VFS + + D+ +
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIIS 420
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ +IG L P T + VL A A + G+++H I+
Sbjct: 421 WNTMIG---------------------ELKPDSRTMACVLPACASLSALERGKEIHGYIL 459
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
+ G+SS VAN ++D Y KC +L + FD + D+VSW +IAG+ + EAI
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIA 519
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--SALVDM 423
+M G P+ ++ +IL S +E G + I+K F+ + + +VD+
Sbjct: 520 TFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDL 578
Query: 424 YAKCGRLNDARKVFDHLS-SKNLVSWNTMLVG 454
++ G L+ A + + L + + W +L G
Sbjct: 579 LSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 198/425 (46%), Gaps = 46/425 (10%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I S F + N LL MY K ++ A ++F++M ERNV+SW+++I+G+++ G + A+
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M ++ + + ACA G +GK++H + + +E N V N L++MY
Sbjct: 338 KLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMY 397
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + +A VF + ++ ISW +++ GE + + A
Sbjct: 398 AKCGSMEAANSVFSTMVVKDIISWNTMI------GE---------------LKPDSRTMA 436
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
VL ACA L L+ G +IH + + D+ VA L++LY KC L LA +F I
Sbjct: 437 CVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 496
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
DL +W+ +I GY G EAI F +M +G+ P EV+F +L A + H
Sbjct: 497 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS-----------H 545
Query: 302 SLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSWN 348
S +++ G+ F + N ++D S+ L ++ + + + D W
Sbjct: 546 SGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWG 605
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
AL+ G + H E E + + +FE N Y + NI ++ E K+ I K
Sbjct: 606 ALLCG-CRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQ 664
Query: 409 GFDSN 413
G N
Sbjct: 665 GLRKN 669
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 132/528 (25%), Positives = 230/528 (43%), Gaps = 83/528 (15%)
Query: 38 ERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE 97
+ V ++A I F Q+G E A+ + +C E TY + CA GK+
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMEL--ICMCKKSELETKTYSSVLQLCAGLKSFTDGKK 120
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
+H ++ S D +L + L+S Y CG+
Sbjct: 121 VHS-------------------------IIKSNSVGVDEAL------GLKLVSFYATCGD 149
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
G ++F K V + F ++ A +G+ K + + ++ + +E
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNF----MVSEYAKIGDFKESICLFKIMVEKGIE-------- 197
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
++ + A +F + D+ +W+++I GY G + ++ +M G+
Sbjct: 198 -------GKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVD 250
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
T VL A+ G+ +HSL IK F +NT+LD YSKC L+ +L+ F+
Sbjct: 251 LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 310
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
+M E +VVSW ++IAG+ AI+LL+ M EG ++ ++IL+ + +++
Sbjct: 311 KMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDN 370
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
GK H I +SN+ + +AL+DMYAKCG + A VF + K+++SWNTM+
Sbjct: 371 GKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI----- 425
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
++KP+ T VL AC + +E G ++R+ S R
Sbjct: 426 ----------------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDR-- 467
Query: 518 HIA-SVVHLF---ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
H+A ++V L+ G R ++ I S + V W +++G H
Sbjct: 468 HVANALVDLYVKCGVLGLARLLFDMIPSKDL----VSWTVMIAGYGMH 511
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 5/157 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ + N L+ +YVK + A+ LFD +P ++++SW+ +I+G+ G A
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
+ F M +EP+ +++ + AC+ G G M +E C+++
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVD 577
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQC 155
+ + G LS A +F+ + ++ W +LL C C
Sbjct: 578 LLSRTGNLSKAYEFIETLPIAPDATIWGALL---CGC 611
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 201/660 (30%), Positives = 350/660 (53%), Gaps = 12/660 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSR--INDAQKLFDEMPERNVISWSALISGFSQIGMPE 58
++ SGF +N LL Y + S + A+++FDE+P R+ +SW+AL++ + G
Sbjct: 17 LLKSGFAAPT-PWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASGAHP 75
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
A R M L N + A+ + A G ++ +SGL N ++ L+
Sbjct: 76 EAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALL 135
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
++Y KCG + A+ VFD ERN++SW +L++ Y + G+ L++FL + G+ E
Sbjct: 136 DVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEA 195
Query: 179 SCASVLGACAVLGNLKVGM-QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ AS+L AV G M Q+H + K V I Y++C L + R+F
Sbjct: 196 TFASLL--TAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDG 253
Query: 238 I-QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFAD-VKET 294
I + DL +W+A++G Y G EA+ FV+M SG+ P +F+ ++ + ++ +
Sbjct: 254 IGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDD 313
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE---LLEESLKTFDEMDEHDVVSWNALI 351
GR +H L+IK T V N ++ Y++ ++E++ K F+ + D VSWN+++
Sbjct: 314 HQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSML 373
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
G+ +A++ + M E + Y +S L SS++ ++ GKQ H ++ GF
Sbjct: 374 TGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFA 433
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
SN + S+L+ MY+K G ++DARK F+ + V WN M+ GYAQHG +++ M
Sbjct: 434 SNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEM 493
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
+ K + TF+G++++C H GLV+EG N+M +G+ RM+H A V L+ GQ
Sbjct: 494 LQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQ 553
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
+A + I S P EP+ +VW LL C+ H ++ L A + +P S +++LS++
Sbjct: 554 LDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSM 613
Query: 592 YAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
Y+ MW + A V+++MK++ L K G S E++N++H F+ + + +++E++ L
Sbjct: 614 YSGLGMWSDRATVQRVMKKRGLSKVPGWSLIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 184/605 (30%), Positives = 315/605 (52%), Gaps = 37/605 (6%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
K++H + R+ L+ ++ +I++Y LL A +F ++W S++ +
Sbjct: 24 AKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
L F+ R SG SVL +C ++ +L+ G +H + + ++ D +
Sbjct: 83 QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 215 AMGLINLYAKCEKL------------------------------------DLASRVFSNI 238
L+N+YAK + D RVF +
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVM 202
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +++ +I GYAQ G +A+ + +M ++ L P T S VL F++ + I G+
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H +I+ G S ++ ++++D Y+K +E+S + F + D +SWN+L+AG++ +
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
Y EA+ L + M+ P +S+++ + + + GKQ H +++ GF SN+ I S
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALVDMY+KCG + ARK+FD ++ + VSW +++G+A HG G EA+ ++ M+ +KP
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N F+ VL+AC H+GLV+E W YFNSM + +G++ ++H A+V L G+ AY F
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNF 502
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I +EP VW LLS C HK+L L AEKI + D E+ A++++ N+YA W
Sbjct: 503 ISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRW 562
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
E AK+R M++K L+K CSW E++NK H F + + ++E + + +
Sbjct: 563 KEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKE 622
Query: 659 GYVPD 663
GYV D
Sbjct: 623 GYVAD 627
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 222/465 (47%), Gaps = 40/465 (8%)
Query: 33 FDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDA 92
F + V++W ++I F+ + AL F M P++ + + +C D
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGK-CGL------------------------- 126
R G+ +HG + R G++ + + N L+NMY K G+
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 127 ----------LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+ S + VF+ ++ +S+ ++++ Y Q G + L++ + +
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
F+ +SVL + ++ G +IH V + ++ D ++ L+++YAK +++ + RVFS
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ D +W++L+ GY Q G+ EA+ LF +M ++ + P V FS V+ A A +
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+QLH +++ GF S F+A+ ++D YSKC ++ + K FD M+ D VSW A+I GH
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE--WGKQTHCCIVKPGFDSNV 414
H EA+ L ++M +G PN + +L S + ++ WG V G + +
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY-GLNQEL 480
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQH 458
+A+ D+ + G+L +A + + S W+T+L + H
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 150/266 (56%)
Query: 26 INDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSA 85
I+ +++F+ MP ++V+S++ +I+G++Q GM E AL R M L+P+ +T +
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
+ D GKEIHG + R G++ + ++ + L++MY K + ++ VF R+ ISW
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
SL++ Y Q G + L++F + V + +SV+ ACA L L +G Q+H V +
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
+ F+A L+++Y+KC + A ++F + + D +W+A+I G+A G EA+ L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADV 291
F +M G+ P++V F VL A + V
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHV 457
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 129/254 (50%), Gaps = 6/254 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G +V + L+ MY K +RI D++++F + R+ ISW++L++G+ Q G A
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEA 327
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR MV ++P + + ACA GK++HG + R G N +++ L++M
Sbjct: 328 LRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDM 387
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + +A+ +FD + +SW +++ + G + +F ++ GV ++ +
Sbjct: 388 YSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAF 447
Query: 181 ASVLGACAVLGNLKVG---MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+VL AC+ +G + + V+ E + + A+ +L + KL+ A S
Sbjct: 448 VAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA--DLLGRAGKLEEAYNFISK 505
Query: 238 IQL-PDLTAWSALI 250
+ + P + WS L+
Sbjct: 506 MCVEPTGSVWSTLL 519
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 37/233 (15%)
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+K +QLH+ I+ S T A+ V+ Y+ +LL E+L F + V++W ++
Sbjct: 18 IKSKSQAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSV 76
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
I + +A+ +M G CP+ + ++L + + + +G+ H IV+ G
Sbjct: 77 IRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGM 136
Query: 411 DSNVVIGSALVDMYAK---------CGRLND---------------------------AR 434
D ++ G+AL++MYAK G + D R
Sbjct: 137 DCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVR 196
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
+VF+ + K++VS+NT++ GYAQ G+ +AL + M +KP+ T VL
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 198/647 (30%), Positives = 339/647 (52%), Gaps = 24/647 (3%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V + L+ MY + + DA +LFDEMPER+V++W+A+ISG G L+Y MV
Sbjct: 144 SVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMV 203
Query: 69 CCV----LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
PN T + AC G+ G +HG ++G+ V + L +MY KC
Sbjct: 204 RSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKC 263
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
A+ +F E++ +SW SL+ +YC+ G +++FL +SG+ E + +L
Sbjct: 264 DSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLL 323
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
++ G H+ + + + LI++YAKC+++D+A+ VF + D
Sbjct: 324 AGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTD 383
Query: 245 AWSALIGGYAQLGKACEAIDLFVKM---------FSSGLMPSEVTFSYVLGAFADVKETI 295
+WS+++ Y + G + ++L+ +M + + + S ++ LG
Sbjct: 384 SWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRL----- 438
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+ H IK + VAN ++ Y +C + + K F + DVV+W+ALI+ +
Sbjct: 439 -GQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYS 497
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
H +A+ L ML EG PN T ++++ +++ A+E G+ H + G + ++
Sbjct: 498 HLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLS 557
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
I +ALVDMY KCG+L ARK+FD + +++V+WN M+ GY HG +AL+++SMM+
Sbjct: 558 ICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGN 617
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+KPN TF+ +LSAC H GLV++G F M ++ + P + H A +V L G + A
Sbjct: 618 VKPNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEA 676
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
+ + + PIEP+ +W LL CK H + +G A+K ++DPE+ +I++SN Y A
Sbjct: 677 EDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSA 736
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTE----LQNKMHYFSTSRFAQ 638
W+E K+R +MK ++K G S + ++N++ + S F Q
Sbjct: 737 EKWNEIEKLRDMMKNHGVEKSIGWSTIDICGFMKNQLTQWQHSLFEQ 783
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 170/358 (47%), Gaps = 8/358 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ F +V+ N L+ MY K +++ A +F + +R+ SWS+++ + + G+
Sbjct: 342 IVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKC 401
Query: 61 LNYFRLMVCCVLEPNYYTY-----VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
L +R M + + + Y + +S+C+ G R G+ H + NS V+N
Sbjct: 402 LELYREMQ--FRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVAN 459
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
LI+MYG+CG A+ +F ++ ++W +L+SSY G L ++ GV
Sbjct: 460 ALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKP 519
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ + SV+ +CA L L+ G IHS V LE D + L+++Y KC +L +A ++F
Sbjct: 520 NSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMF 579
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
++ D+ W+ +I GY G+A +A+ LF M + P+ +TF +L A
Sbjct: 580 DSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVD 639
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIA 352
GR+L + + + ++D K L+E+ M E D W L+
Sbjct: 640 KGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLG 697
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 148/317 (46%), Gaps = 7/317 (2%)
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H+L L A L++ Y+ LA+ F+ PD W++L+ +
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF---SSFTFV 315
+ +M +SG PS T V A A++ G +H+ ++ G V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE-- 373
A++++ Y++C + ++++ FDEM E DVV+W A+I+G + + GE + L M+
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 374 --GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
G PN T + L + + G H VK G + S+L MY KC
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
DAR +F L K+LVSW +++ Y + G +A+E++ M+E+ ++P++ +L+
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327
Query: 492 HIGLVEEGWHYFNSMIR 508
+ V G + +++R
Sbjct: 328 NDAKVRGGKTFHAAIVR 344
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 155/374 (41%), Gaps = 62/374 (16%)
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH+L + G S A ++ YS L + F D WN+L+ +
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF---DSNVVI 416
+ + + M G P+ +T + + ++++ A+ G H V+ G D +V +
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM----Q 472
S+LV MYA+CG + DA ++FD + +++V+W ++ G +G E L M
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV-HLFA---- 527
+ +PN T L AC +G + G + + G+ + H SVV LF+
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVG-----TCLHGFGVKAGVGHCPSVVSSLFSMYTK 262
Query: 528 -----------------------------CR-GQTRRAYEF---IKSSPIEPNKVVWRCL 554
CR G +A E ++ S ++P++VV CL
Sbjct: 263 CDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCL 322
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN----VYAEANMWDETAKVRKIMKE 610
L+G + G+ I+ + D+ +++ N +YA+ D A V +++ +
Sbjct: 323 LAGLGNDAKVRGGKTFHAAIVRRNFGDS---VLIGNALISMYAKCKQVDIAATVFRMLHQ 379
Query: 611 KSLKKDTGCSWTEL 624
+DT SW+ +
Sbjct: 380 ----RDTD-SWSSM 388
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 189/689 (27%), Positives = 338/689 (49%), Gaps = 103/689 (14%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P NHLL Y K R A+++FD MP
Sbjct: 39 PPTYLLNHLLTAYGKAGRHARARRVFDAMPH----------------------------- 69
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
PN +TY N L++ LL
Sbjct: 70 ------PNLFTY-----------------------------------NALLSTLAHARLL 88
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL--LSRKSGVAISEFSCASVLG 185
S + +F + +R+ +S+ ++++ + G H ++++L L S V S + ++++
Sbjct: 89 SDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVM 148
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK--------------------- 224
A + LG+ +G Q H + + + FV L+++YAK
Sbjct: 149 AASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVM 208
Query: 225 ----------CEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
C+ ++ A R+F + D W+ ++ G+ Q G EA+++F +M G+
Sbjct: 209 YNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGI 268
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+ TF +L A + G+Q+H+ II+ + FV + ++D YSKC ++ +
Sbjct: 269 AIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAET 328
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
F M +++SW ALI G+ + EA+ + +M +G P+ YT ++++ +++ +
Sbjct: 329 VFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLAS 388
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
+E G Q HC + G + + +ALV +Y KCG + DA ++FD +S + VSW ++ G
Sbjct: 389 LEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSG 448
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
YAQ G +E ++++ M +KP+ TFIGVLSAC G VE+G YF+SM +DHGI P
Sbjct: 449 YAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVP 508
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKI 574
DH ++ L++ G+ + A EFIK P+ P+ + W LLS C+ D+ +G++AAE +
Sbjct: 509 IDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENL 568
Query: 575 LSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTS 634
L DP++ +++++L +++A W+E A++R+ M+++ +KK+ GCSW + +NK+H FS
Sbjct: 569 LEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSAD 628
Query: 635 RFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ ++E + L+ + + GY PD
Sbjct: 629 DQSHPCSKGIYEKLEWLNSKMLEEGYKPD 657
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 244/484 (50%), Gaps = 41/484 (8%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR- 65
HPN+ TYN LL ++D + LF M +R+++S++A+I+GFS G A+ +
Sbjct: 69 HPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLA 128
Query: 66 -LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK- 123
L + P+ T V A ++ GD GK+ H ++ R G N+ V + L++MY K
Sbjct: 129 LLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKM 188
Query: 124 ------------------------------CGLLSSAQFVFDASLERNSISWVSLLSSYC 153
C ++ A+ +F+ +R+SI+W ++++ +
Sbjct: 189 SLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFT 248
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
Q G L+IF R G+AI +++ S+L AC L L+ G QIH+ + + + + F
Sbjct: 249 QNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVF 308
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
V L+++Y+KC + LA VF + ++ +W+ALI GY Q G + EA+ +F +M G
Sbjct: 309 VGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ P + T V+ + A++ G Q H L + G + V+N ++ Y KC +E++
Sbjct: 369 IDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAH 428
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
+ FDEM HD VSW AL++G+ E I+L + ML +G P+ T+ +L+ S
Sbjct: 429 RLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAG 488
Query: 394 AIEWGKQTHCCIVKPGFDSNVVI----GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSW 448
+E G+ + K D +V + ++D+Y++ G+L +A + + + + W
Sbjct: 489 FVEKGRSYFHSMQK---DHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGW 545
Query: 449 NTML 452
T+L
Sbjct: 546 GTLL 549
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 197/423 (46%), Gaps = 48/423 (11%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDE----------------------------- 35
GF N + L+ MY K S + DA++ FDE
Sbjct: 170 GFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLF 229
Query: 36 --MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDAR 93
M +R+ I+W+ +++GF+Q G+ AL FR M + + YT+ ++AC +
Sbjct: 230 EVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALE 289
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
GK+IH + R+ + N V + L++MY KC + A+ VF +N ISW +L+ Y
Sbjct: 290 QGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYG 349
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
Q G +++F ++ G+ +++ SV+ +CA L +L+ G Q H L L
Sbjct: 350 QNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYIT 409
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
V+ L+ LY KC ++ A R+F + D +W+AL+ GYAQ G+A E IDLF KM + G
Sbjct: 410 VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKG 469
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQ-LHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
+ P VTF VL A + GR HS+ G ++D YS+ L+E+
Sbjct: 470 VKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEA 529
Query: 333 LKTFDEMDEH-DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+ +M H D + W L L++C +E+ K + N+L I
Sbjct: 530 EEFIKQMPMHPDAIGWGTL----LSACRLRGDMEIGK-----------WAAENLLEIDPQ 574
Query: 392 IPA 394
PA
Sbjct: 575 NPA 577
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 120/254 (47%), Gaps = 6/254 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + + NV + L+ MY K I A+ +F M +N+ISW+ALI G+ Q G E A
Sbjct: 298 IIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEA 357
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M ++P+ YT +S+CA+ G + H SGL VSN L+ +
Sbjct: 358 VRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTL 417
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG + A +FD + +SW +L+S Y Q G + +F GV +
Sbjct: 418 YGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTF 477
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCALEF--DKFVAMGLINLYAKCEKLDLASRVFSN 237
VL AC+ G ++ G HS+ + D + M I+LY++ KL A
Sbjct: 478 IGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCM--IDLYSRSGKLKEAEEFIKQ 535
Query: 238 IQL-PDLTAWSALI 250
+ + PD W L+
Sbjct: 536 MPMHPDAIGWGTLL 549
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 194/598 (32%), Positives = 322/598 (53%), Gaps = 4/598 (0%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG 95
MPER+V+SW++L+S F GM A M+ N + V V AC + + + G
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
IH + GL +++N L++MYGK G + ++ VFD LE+N +SW S + +
Sbjct: 61 LSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNA 120
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G + L++F + V + +S+L A LG+ +G ++H K A++ D FVA
Sbjct: 121 GFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVA 180
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L+++YAK L+ AS +F ++ ++ +W+A+I Q G EA L M SG
Sbjct: 181 NSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGEC 240
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P+ +T VL A A + G+Q+H+ I+ G F++N ++D YSKC L +
Sbjct: 241 PNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNI 300
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F E E D VS+N LI G+ S E++ L K M G + ++ L+ +++
Sbjct: 301 F-ERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVF 359
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
+ GK+ HC +V+ + + ++L+D+Y K G L A K+F+ ++ K++ SWNTM++GY
Sbjct: 360 KHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGY 419
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
HG A E++ +M+ + + + ++I VL+AC H GLV++G YF+ M+ + I P+
Sbjct: 420 GMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQN-IEPQ 478
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL 575
H A +V L GQ + E I+ P N VW LL C+ H ++ L ++AAE +
Sbjct: 479 QMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLF 538
Query: 576 STDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQ--NKMHYF 631
PE + + ++ N+YAE W+E K+RK+MK + ++K+ SW + Q NK+ F
Sbjct: 539 ELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWVQDQDGNKLQAF 596
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 232/459 (50%), Gaps = 2/459 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G + V N L+ MY KF + + ++FD M E+N +SW++ I F G L
Sbjct: 68 VKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVL 127
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
FR M + P T + A G G+E+HG + ++L+ V+N L++MY
Sbjct: 128 RMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMY 187
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G L A +F+ +RN +SW +++++ Q G ++ +KSG + +
Sbjct: 188 AKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLV 247
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+VL ACA + +LK+G QIH+ + L FD F++ LI++Y+KC +L LA +F +
Sbjct: 248 NVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSEKD 307
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D++ ++ LI GY+Q E++ LF +M S G+ V+F L A ++ G+++H
Sbjct: 308 DVS-YNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIH 366
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
++++ S F++N++LD Y+K +L + K F+++ + DV SWN +I G+
Sbjct: 367 CVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQID 426
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
A EL + M +G + +Y +L S ++ GK+ +V + + + +V
Sbjct: 427 IAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMV 486
Query: 422 DMYAKCGRLND-ARKVFDHLSSKNLVSWNTMLVGYAQHG 459
D+ + G+L+ A + D N W +L HG
Sbjct: 487 DLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHG 525
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 179/517 (34%), Positives = 283/517 (54%), Gaps = 2/517 (0%)
Query: 148 LLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
+++ Y C H H +F + + F+ +SVL AC + L G +H L K
Sbjct: 64 MIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHG 123
Query: 208 LEFDKFVAMGLINLYAKC-EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
L+ +V L+++YA C +D A VF I L + +W+ LI GY + +F
Sbjct: 124 LDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVF 183
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
+M + + +FS + A + G QLH+ + K GF S V N++LD Y +C
Sbjct: 184 RQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRC 243
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
E+ + F EM++ D+++WN LIAG+ S + E++ + M EG PN +T+++I+
Sbjct: 244 SCFSEANRYFYEMNQRDLITWNTLIAGYERS-NPTESLYVFSMMESEGFSPNCFTFTSIM 302
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+ + + G+Q H I++ G D N+ + +AL+DMY+KCG + D+ +VF +S ++LV
Sbjct: 303 AACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLV 362
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
SW M++GY HG G EA+E++ M + I+P+ F+ +LSAC H GLV+EG YF M
Sbjct: 363 SWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLM 422
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVL 566
+ D+ ISP + VV L G+ AYE I+S P +P++ VW L CK H L
Sbjct: 423 VGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNL 482
Query: 567 GRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
G+ AA +IL P ++MLSN+YA W E A++RK+MK KK+TG SW E+ N
Sbjct: 483 GKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGN 542
Query: 627 KMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++ F + +++V+ L H+ + GYVPD
Sbjct: 543 HVYSFVVGDEVGSKIEGIYQVLENLIGHMKESGYVPD 579
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 199/410 (48%), Gaps = 9/410 (2%)
Query: 39 RNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEI 98
+ +I + +I+G++ A F M+ L+PN +T + AC G+ +
Sbjct: 56 KGLIGEALMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLV 115
Query: 99 HGRMYRSGLELNSHVSNCLINMYGKCGL-LSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
HG + GL+ +V N L++MY C + + A VF +N +SW +L++ Y +
Sbjct: 116 HGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDD 175
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
GL++F V ++ FS + + AC +G+ G Q+H+ V K E + V
Sbjct: 176 GYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNS 235
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
++++Y +C A+R F + DL W+ LI GY + E++ +F M S G P+
Sbjct: 236 ILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYER-SNPTESLYVFSMMESEGFSPN 294
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
TF+ ++ A A + G+Q+H II+ G ++N ++D YSKC + +S + F
Sbjct: 295 CFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFG 354
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
M D+VSW A++ G+ + EA+EL M+ G P+ + IL+ S ++
Sbjct: 355 GMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDE 414
Query: 398 GKQTHCCIVKPGFDSNVV----IGSALVDMYAKCGRLNDARKVFDHLSSK 443
G + +V D N+ I +VD+ + G++ +A ++ + + K
Sbjct: 415 GLRYFKLMVG---DYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFK 461
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 171/354 (48%), Gaps = 4/354 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFS-RINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
I G + N L+ MY ++DA +F + +N +SW+ LI+G++
Sbjct: 120 IKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGG 179
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M+ +E N +++ AV AC S G G+++H + + G E N V N +++M
Sbjct: 180 LRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDM 239
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +C S A F +R+ I+W +L++ Y + L +F + G + + F+
Sbjct: 240 YCRCSCFSEANRYFYEMNQRDLITWNTLIAGY-ERSNPTESLYVFSMMESEGFSPNCFTF 298
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S++ ACA L L G QIH + + L+ + ++ LI++Y+KC + + +VF +
Sbjct: 299 TSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSR 358
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL +W+A++ GY G EA++LF KM SG+ P V F +L A + G +
Sbjct: 359 RDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRY 418
Query: 301 HSLII-KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIA 352
L++ S + V+D + +EE+ + + M + D W +
Sbjct: 419 FKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLG 472
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 144/284 (50%), Gaps = 10/284 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N+ N +L MY + S ++A + F EM +R++I+W+ LI+G+ + P +L F
Sbjct: 225 GFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSN-PTESLYVF 283
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+M PN +T+ ++ACA+ G++IHGR+ R GL+ N +SN LI+MY KC
Sbjct: 284 SMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKC 343
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G ++ + VF R+ +SW +++ Y G +++F +SG+ ++L
Sbjct: 344 GNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAIL 403
Query: 185 GACAVLGNLKVGMQIHSL-VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PD 242
AC+ G + G++ L V + D+ + +++L + K++ A + ++ PD
Sbjct: 404 SACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPD 463
Query: 243 LTAWSALIGG-----YAQLGK--ACEAIDLFVKMFSSGLMPSEV 279
W +G + LGK A +DL M + +M S +
Sbjct: 464 ECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNI 507
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 303/544 (55%), Gaps = 2/544 (0%)
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
LI Y GL A +F+ ER+ ++W +++ + C + +F +S V +
Sbjct: 49 LIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPN 108
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYA-KCEKLDLASRVF 235
F+ +SVL AC + L G HSL K ++ +V L+++YA C +D A VF
Sbjct: 109 AFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVF 168
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
++I L +W+ LI G+ G + F +M + P+ +FS A A +
Sbjct: 169 NDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYS 228
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+Q+H+ + K G V N++LD Y +C L ++ + F E+ E ++++WN LIAG+
Sbjct: 229 CGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYE 288
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
S E++ L M EG+ PN +T+++I +++ + G+Q H IV+ GFD NV
Sbjct: 289 RS-DSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVA 347
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ ++L+DMYAKCG ++D+ K+F + ++LVSW TM++GY HG G+EA++++ M ++
Sbjct: 348 LINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSG 407
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
I+P+ F+GVL C H GLV++G YF SM+ D+ I+P + VV L G+ A
Sbjct: 408 IQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEA 467
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
++ +++ P EP++ VW LL CK +K LG AA+++L P +++LS +YA
Sbjct: 468 FQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAE 527
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
W E AK+RK+MK + KK+ G SW E++N+++ F +H+V++ L H+
Sbjct: 528 GKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVLIWHM 587
Query: 656 FDGG 659
D G
Sbjct: 588 KDDG 591
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 215/435 (49%), Gaps = 4/435 (0%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P+V N L+ Y +A LF+E+PER+V++W+A+I GF+ A F M
Sbjct: 42 PSVWATN-LIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEM 100
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY-GKCGL 126
+ ++PN +T + AC G H + G++ + +V N L++MY C
Sbjct: 101 LRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCAT 160
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ A VF+ + ++SW +L++ + G+ GL F V + FS + A
Sbjct: 161 MDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARA 220
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA + + G QIH+ V K L D V ++++Y +C L A R F + +L W
Sbjct: 221 CASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITW 280
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ LI GY + + E++ LF +M S G P+ TF+ + A A++ G+Q+H I++
Sbjct: 281 NTLIAGYER-SDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVR 339
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
GF + N+++D Y+KC + +S K F +M D+VSW ++ G+ A + EA++L
Sbjct: 340 RGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKL 399
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSALVDMYA 425
+M+ G P+ + +L S ++ G K + + + I +VD+
Sbjct: 400 FDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLG 459
Query: 426 KCGRLNDARKVFDHL 440
+ GR+ +A ++ +++
Sbjct: 460 RAGRVEEAFQLVENM 474
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 175/354 (49%), Gaps = 8/354 (2%)
Query: 5 GFHPNVITYNHLLLMYV-KFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
G +V N LL MY + ++DA +F+++P + +SW+ LI+GF+ G L
Sbjct: 139 GIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLA 198
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
FR M+ + PN +++ A ACAS GK+IH + + GL ++ V N +++MY +
Sbjct: 199 FRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCR 258
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
C L A+ F E+N I+W +L++ Y + + L +F G + F+ S+
Sbjct: 259 CNYLCDAKRCFGELTEKNLITWNTLIAGY-ERSDSSESLSLFFQMGSEGYKPNCFTFTSI 317
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM--GLINLYAKCEKLDLASRVFSNIQLP 241
ACA L L G Q+H + + FDK VA+ LI++YAKC + + ++F ++
Sbjct: 318 TAACANLAVLSCGQQVHGGIVRRG--FDKNVALINSLIDMYAKCGSISDSHKLFCDMPGR 375
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG-RQL 300
DL +W+ ++ GY G EA+ LF +M SG+ P + F VL + G +
Sbjct: 376 DLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYF 435
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
S++ + + V+D + +EE+ + + M E D W AL+
Sbjct: 436 RSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGA 489
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 4/245 (1%)
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ N + ++ K L E+ F+E+ E DVV+W A+I G + HY +A + +ML
Sbjct: 45 WATNLIKSYFDK-GLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRS 103
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY-AKCGRLND 432
PN +T S++L + A+ G H K G D +V + +AL+DMY A C ++D
Sbjct: 104 EVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDD 163
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A VF+ + K VSW T++ G+ G G L + M + PN +F AC
Sbjct: 164 ALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACAS 223
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
I G ++ + +G+ + S++ ++ CR + E N + W
Sbjct: 224 ISSYSCG-KQIHAAVTKYGLHCDAPVMNSILDMY-CRCNYLCDAKRCFGELTEKNLITWN 281
Query: 553 CLLSG 557
L++G
Sbjct: 282 TLIAG 286
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF NV N L+ MY K I+D+ KLF +MP R+++SW+ ++ G+ G + A
Sbjct: 337 IVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEA 396
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLE-----LNSHVSN 115
+ F MV ++P+ ++G + C+ G G + +RS LE + +
Sbjct: 397 VKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGL----KYFRSMLEDYNINPDQEIYR 452
Query: 116 CLINMYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
C++++ G+ G + A Q V + E + W +LL +
Sbjct: 453 CVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGA 489
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 189/607 (31%), Positives = 337/607 (55%), Gaps = 5/607 (0%)
Query: 31 KLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRG 90
+LFDEMP+R+ +SW+ +ISG++ G E + F M C + Y++ + AS
Sbjct: 2 RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAK 61
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
G+++HG + + G E N +V + L++MY KC + A F LE NS+SW +L++
Sbjct: 62 RFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIA 121
Query: 151 SYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ Q + + L+ K+ V + + + A +L + Q+H+ V K LE
Sbjct: 122 GFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLE 181
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQ-LPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+ + +I+ YA C + A RVF + DL +W+++I G ++ + A +LF +
Sbjct: 182 HEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTE 241
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK--C 326
M + + T++ ++ A + + G+ LH L+IK G T V+N ++ Y +
Sbjct: 242 MHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPT 301
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
+++++L F+ + D+VSWN+++ G + +A++ + + + Y +S +L
Sbjct: 302 GVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVL 361
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NL 445
SD+ ++ G+QTH K F+SN + S+L+ MY+KCG + +ARK F+ +SSK N
Sbjct: 362 RSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNT 421
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
++WN M++GYAQHG G+ +L+++S M +K + TF +L+AC H GL++EG NS
Sbjct: 422 IAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNS 481
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
M + I PRM+H A+ V L G + E I+S P+ P+ +V + L C+ ++
Sbjct: 482 MEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVLKTFLGVCRACGEIE 541
Query: 566 LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQ 625
+ A +L +PED A++ LS++Y++ W+E A V+K+MKE+ +KK G SW E++
Sbjct: 542 MATQVANHLLEIEPEDHFAYVSLSHMYSDLKKWEEKANVKKMMKERGVKKVPGWSWIEIR 601
Query: 626 NKMHYFS 632
N+++ F+
Sbjct: 602 NQVNAFN 608
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 225/450 (50%), Gaps = 14/450 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ NV + L+ MY K R+ DA F E+ E N +SW+ALI+GF Q+ + A
Sbjct: 73 VVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAGFVQVRDTKTA 132
Query: 61 LNYFRLM-VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
LM + + + T+ ++ K++H ++ + GLE + N +I+
Sbjct: 133 FWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLEHEITICNAMIS 192
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
Y CGL+S A+ VFD ++ ISW S+++ + + ++F ++ + +
Sbjct: 193 SYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEMHRNWIETDIY 252
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK--LDLASRVFS 236
+ ++ AC+ + G +H LV K LE V+ LI++Y + + A +F
Sbjct: 253 TYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFE 312
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+++ DL +W++++ G++Q G + +A+ F + SS + + FS VL + +D+
Sbjct: 313 SLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQL 372
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHL 355
G+Q H+L K F S FV ++++ YSKC ++E + K F+++ +H+ ++WNA+I G+
Sbjct: 373 GQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYA 432
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGF 410
+++L M + + T++ IL S I+ G + + ++P
Sbjct: 433 QHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNSMEPVYKIQPRM 492
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
+ +A VD+ + G +N +++ + +
Sbjct: 493 EHY----AAAVDLLGRAGLVNKVKELIESM 518
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 146/292 (50%), Gaps = 14/292 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSR--INDAQKLFDEMPERNVISWSALISGFSQIGMPE 58
+I G N L+ MY++F + DA LF+ + ++++SW+++++GFSQ G+ E
Sbjct: 277 VIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSE 336
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
A+ +FR + +E + Y + + +C+ + G++ H +S E N V++ LI
Sbjct: 337 DAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLI 396
Query: 119 NMYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
MY KCG++ +A+ F+ S + N+I+W +++ Y Q G L +F V +
Sbjct: 397 LMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDH 456
Query: 178 FSCASVLGACAVLGNLKVGMQI---HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ ++L AC+ G ++ G+++ V+K + + A ++L + ++ +
Sbjct: 457 VTFTAILTACSHTGLIQEGLELLNSMEPVYKIQPRMEHYAAA--VDLLGRAGLVNKVKEL 514
Query: 235 FSNIQL-PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYV 284
++ L PD +G + +AC I++ ++ + L + E F+YV
Sbjct: 515 IESMPLNPDPMVLKTFLG----VCRACGEIEMATQVANHLLEIEPEDHFAYV 562
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
++ FDEM + D VSWN +I+G+ + + L DM G + Y++S +L +
Sbjct: 1 MRLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASA 60
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+ G+Q H +VK G++ NV +GS+LVDMYAKC R+ DA F + N VSWN ++
Sbjct: 61 KRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALI 120
Query: 453 VGYAQHGLGREALEIYSMMQ-ENKIKPNDNTFIGVLS 488
G+ Q + A + +M+ + + +D TF +L+
Sbjct: 121 AGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLT 157
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 318/582 (54%), Gaps = 33/582 (5%)
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSG 172
N +++ Y K G +S +++FDA R+ +SW SL+S Y CG +K + +L
Sbjct: 79 NTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGS 138
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK-------- 224
++ + +++L + G +K+G QIH V K FV L+++Y+K
Sbjct: 139 FNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCAR 198
Query: 225 -----------------------CEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACE 261
C +++ + R+F ++ D +W+++I G+ Q G +
Sbjct: 199 KVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRD 258
Query: 262 AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
AID+F +M L + TF VL A V G+Q+H+ II+ + FVA+ ++D
Sbjct: 259 AIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVD 318
Query: 322 FYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYT 381
Y KC+ ++ + F +M +VVSW A++ G+ + + EA++ DM G P+ +T
Sbjct: 319 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFT 378
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
++++ +++ ++E G Q H + G S + + +ALV +Y KCG + D+ ++F+ +S
Sbjct: 379 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 438
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
K+ V+W ++ GYAQ G E + ++ M + +KP+ TFIGVLSAC GLVE+G
Sbjct: 439 FKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQ 498
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
F SMI +HGI P DH ++ LF+ G+ A FI P P+ + W LLS C+ +
Sbjct: 499 IFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFY 558
Query: 562 KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSW 621
++ +G++AAE ++ DP +T+++++LS+VYA W+E A++RK M++K L+K+ GCSW
Sbjct: 559 GNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSW 618
Query: 622 TELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ +N++H FS + ++ + +L+ + GYVPD
Sbjct: 619 IKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPD 660
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 251/502 (50%), Gaps = 46/502 (9%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
HPN+ ++N +L Y K R+++ + LFD MP R+ +SW++LISG++ G+ ++ + L
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 67 MVC--CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ N T+ + + RG + G++IHG + + G V + L++MY K
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 125 GLLSSAQFVFDA-------------------------------SLERNSISWVSLLSSYC 153
G++S A+ VFD ER+SISW S+++ +
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
Q G + IF + + + +++ SVL AC + L+ G Q+H+ + + + + F
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
VA L+++Y KC+ + A VF + ++ +W+A++ GY Q G + EA+ F M G
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ P + T V+ + A++ G Q H+ + G SF V+N ++ Y KC +E+S
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSH 431
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
+ F+E+ D V+W AL++G+ E I L + ML G P+ T+ +L+ S
Sbjct: 432 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAG 491
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIG-----SALVDMYAKCGRLNDARKVFDHLS-SKNLVS 447
+E G Q I + + + ++ + ++D++++ GR+ +AR + + S + +S
Sbjct: 492 LVEKGNQ----IFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAIS 547
Query: 448 WNTMLVG---YAQHGLGREALE 466
W T+L Y +G+ A E
Sbjct: 548 WATLLSSCRFYGNMDIGKWAAE 569
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 204/440 (46%), Gaps = 66/440 (15%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
++L C N +HS + K + F+ LI+ YAK + A +VF + P
Sbjct: 14 ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73
Query: 242 DLTAWSALIGGYAQLGKACEAIDLF---------------------------VKMFSSGL 274
+L +W+ ++ Y++LG+ E LF VK ++ L
Sbjct: 74 NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133
Query: 275 MP------SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK--- 325
+ +TFS +L + GRQ+H ++K GF S+ FV + ++D YSK
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193
Query: 326 ----------------------------CELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
C +E+S + F EM E D +SW ++I G +
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+AI++ ++M E + YT+ ++L + A++ GKQ H I++ + N+ +
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVA 313
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
SALVDMY KC + A VF ++ KN+VSW MLVGY Q+G EA++ +S MQ+ I+
Sbjct: 314 SALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+D T V+S+C ++ +EEG F++ G+ + ++V L+ G ++
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHR 432
Query: 538 FIKSSPIEPNKVVWRCLLSG 557
+ ++V W L+SG
Sbjct: 433 LFNEISFK-DEVTWTALVSG 451
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 130/252 (51%), Gaps = 2/252 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + + N+ + L+ MY K I A+ +F +M +NV+SW+A++ G+ Q G E A
Sbjct: 301 IIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEA 360
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M +EP+ +T +S+CA+ G + H R SGL VSN L+ +
Sbjct: 361 VKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTL 420
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG + + +F+ ++ ++W +L+S Y Q G+ + +F G+ + +
Sbjct: 421 YGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTF 480
Query: 181 ASVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
VL AC+ G ++ G QI S++ + + + +I+L+++ +++ A + +
Sbjct: 481 IGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMP 540
Query: 240 L-PDLTAWSALI 250
PD +W+ L+
Sbjct: 541 FSPDAISWATLL 552
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y +L + + K H I+K + + L+ YAK G + A KVFD +
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
NL SWNT+L Y++ G E ++ M + + N+ I + C GL+ +
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPR-RDGVSWNSLISGYAGC---GLIYQSVK 127
Query: 502 YFNSMIRDHG 511
+N M+++ G
Sbjct: 128 AYNLMLKNDG 137
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 194/614 (31%), Positives = 321/614 (52%), Gaps = 4/614 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG--MPEVALNY-FRLMVCCVL 72
LL Y + A+ +FD P + S+ ++ Q VAL+ R C
Sbjct: 70 LLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPE 129
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+ + A+ AC D G +H + G + V N L++MY K G L A+
Sbjct: 130 AQDDFVLSLALKACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECARK 188
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VF+ RN +SW S+LS Q G GL +F R+ V SE++ A+V+ AC+ L
Sbjct: 189 VFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIG 248
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L G +H V K L + F++ L+++Y KC +L+ A VF + DL W+ +I G
Sbjct: 249 LHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVG 308
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y Q G +A+ LF+ + ++P+ VT + VL A A +++ GR +H + +K+G +
Sbjct: 309 YTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEY 368
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
T V N ++D Y+KC+ + E+ + F + DVV+WN++++G+ + +A+ L K M
Sbjct: 369 TVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSL 428
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+G P+ + + L+ S + + GK H VK F SN+ + +AL+++Y KCG L
Sbjct: 429 KGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPS 488
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
AR+VFD ++ +N V+W M+ GY G +++++ M ++ + PND F +LS C H
Sbjct: 489 ARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSH 548
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
G+V YF+SM + I+P M H A +V + A G A EFI + P++ + VW
Sbjct: 549 TGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWG 608
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
L GC+ H L G A ++++ PE ++++SN+Y MW+++ +R+ M+EK
Sbjct: 609 AFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLISNLYTSNGMWEKSQAIRRWMQEKG 668
Query: 613 LKKDTGCSWTELQN 626
L K G S +N
Sbjct: 669 LVKLPGYSSIGREN 682
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 245/479 (51%), Gaps = 23/479 (4%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ MY K + A+K+F+ +P RNV+SW++++SG Q G L F M +
Sbjct: 171 NSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVP 230
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ YT ++AC++ G+ +HG + + GL NS +S L++MY KCG L AQ V
Sbjct: 231 PSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCV 290
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD + + W +++ Y Q G + L++FL + + + + + A+VL A A L +L
Sbjct: 291 FDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDL 350
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G IH + K L V L+++YAKC+ + A+R+F +I D+ AW++++ GY
Sbjct: 351 SLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGY 410
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
A+ +A+ LF +M G P ++ + L A + + + G+ H +K F S
Sbjct: 411 AENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNI 470
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+V+ +L+ Y+KC L + + FDEM++ + V+W A+I G+ +I+L +ML +
Sbjct: 471 YVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKD 530
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS-----NVVIG----SALVDMY 424
G PN +++IL+ S + K+ FDS N+ + +VD+
Sbjct: 531 GVHPNDVAFTSILSTCSHTGMVTAAKRY--------FDSMAQHFNITPSMKHYACMVDVL 582
Query: 425 AKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG---LGREALEIYSMMQENKIKPN 479
A+ G L +A + D++ + S W L G H G EA I MM + +P+
Sbjct: 583 ARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEA--IKRMMVLHPERPD 639
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 192/422 (45%), Gaps = 13/422 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G N LL MYVK + DAQ +FDE+ +++ W+ +I G++Q G P A
Sbjct: 259 VIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDA 318
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F + PN T +SA A D G+ IHG + GL + V N L++M
Sbjct: 319 LRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDM 378
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC +S A +F + ++ ++W S+LS Y + L +F G + S
Sbjct: 379 YAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISV 438
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
L A LG+L +G H K A + +V+ L+NLY KC L A RVF +
Sbjct: 439 VHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMND 498
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE-TIGGRQ 299
+ W A+IGGY G + +IDLF +M G+ P++V F+ +L + T R
Sbjct: 499 RNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRY 558
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG---HL 355
S+ + ++D ++ LEE+L+ D M + D W A + G H
Sbjct: 559 FDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELH- 617
Query: 356 ASCHYGEAIELLKDML-FEGHCPNLYTYSNILNISSDI----PAIEWGKQTHCCIVKPGF 410
+ +GE E +K M+ P+LY + L S+ + AI Q + PG+
Sbjct: 618 SRLQFGE--EAIKRMMVLHPERPDLYVLISNLYTSNGMWEKSQAIRRWMQEKGLVKLPGY 675
Query: 411 DS 412
S
Sbjct: 676 SS 677
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 208/618 (33%), Positives = 328/618 (53%), Gaps = 11/618 (1%)
Query: 15 HLLLMYVKFSRINDAQKLFDEMPER--NVISWSALISGFSQIGMPEVALNYFRLMVCCVL 72
+L +Y + + A+ +FDE+P N I+W +I ++ E AL+ + M+ +
Sbjct: 40 NLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGV 99
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P YTY + ACA GK IH + S + +V L++ Y KCG L A
Sbjct: 100 RPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIK 159
Query: 133 VFDASLERNSISWVSLLSSYCQ--CGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAV 189
VFD +R+ ++W +++S + C V GL FL + R G++ + + + A
Sbjct: 160 VFDEMPKRDMVAWNAMISGFSLHCCLTDVIGL--FLDMRRIDGLSPNLSTIVGMFPALGR 217
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
G L+ G +H + D V G++++YAK + + A RVF + WSA+
Sbjct: 218 AGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAM 277
Query: 250 IGGYAQLGKACEAIDLFVKMFSSG--LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
IGGY + EA ++F +M + M + V +L A + GGR +H +K
Sbjct: 278 IGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKA 337
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
GF V NT++ FY+K L ++ + F E+ DV+S+N+LI G + +C E+ L
Sbjct: 338 GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLF 397
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+M G P++ T +L S + A+ G H V G+ N I +AL+DMY KC
Sbjct: 398 HEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKC 457
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G+L+ A++VFD + +++VSWNTML G+ HGLG+EAL +++ MQE + P++ T + +L
Sbjct: 458 GKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAIL 517
Query: 488 SACVHIGLVEEGWHYFNSMIR-DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
SAC H GLV+EG FNSM R D + PR+DH + L A G AY+F+ P EP
Sbjct: 518 SACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEP 577
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+ V LLS C T+K+ LG ++K+ S E T + ++LSN Y+ A W++ A++R
Sbjct: 578 DIRVLGTLLSACWTYKNAELGNEVSKKMQSLG-ETTESLVLLSNTYSAAERWEDAARIRM 636
Query: 607 IMKEKSLKKDTGCSWTEL 624
I K++ L K G SW ++
Sbjct: 637 IQKKRGLLKTPGYSWVDV 654
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 207/435 (47%), Gaps = 5/435 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFS-QIGMPEVALN 62
S F ++ L+ Y K + A K+FDEMP+R++++W+A+ISGFS + +V
Sbjct: 132 SDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGL 191
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+ + L PN T VG A G R GK +HG R G + V ++++Y
Sbjct: 192 FLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA 251
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSC 180
K + A+ VFD ++N ++W +++ Y + ++F +L + ++ +
Sbjct: 252 KSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAI 311
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+L CA G+L G +H K D V +I+ YAK L A R FS I L
Sbjct: 312 GLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL 371
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ ++++LI G + E+ LF +M +SG+ P T VL A + + G
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC 431
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + G++ T + N ++D Y+KC L+ + + FD M + D+VSWN ++ G
Sbjct: 432 HGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLG 491
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--S 418
EA+ L M G P+ T IL+ S ++ GKQ + + F+ I +
Sbjct: 492 KEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYN 551
Query: 419 ALVDMYAKCGRLNDA 433
+ D+ A+ G L++A
Sbjct: 552 CMTDLLARAGYLDEA 566
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 175/329 (53%), Gaps = 12/329 (3%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDK-FVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L C NL +G IH + K +L V + L LYA C +++LA VF I
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 241 PDLT--AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
P + AW +I YA A +A+DL+ KM +SG+ P++ T+ +VL A A ++ G+
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+HS + F++ +V ++DFY+KC LE ++K FDEM + D+V+WNA+I+G C
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 359 HYGEAIELLKDM-LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+ I L DM +G PNL T + A+ GK H + GF +++V+
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ ++D+YAK + AR+VFD KN V+W+ M+ GY ++ + +EA E++ M
Sbjct: 244 TGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML----- 298
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
NDN + V IGL+ G F +
Sbjct: 299 VNDNV---AMVTPVAIGLILMGCARFGDL 324
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 122/254 (48%), Gaps = 7/254 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF ++ N ++ Y K+ + DA + F E+ ++VIS+++LI+G PE +
Sbjct: 335 VKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESF 394
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + P+ T +G ++AC+ G HG G +N+ + N L++MY
Sbjct: 395 RLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMY 454
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG L A+ VFD +R+ +SW ++L + G L +F +++GV E +
Sbjct: 455 TKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLL 514
Query: 182 SVLGACAVLGNLKVGMQIHSLV----FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
++L AC+ G + G Q+ + + F D + M +L A+ LD A +
Sbjct: 515 AILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCM--TDLLARAGYLDEAYDFVNK 572
Query: 238 IQL-PDLTAWSALI 250
+ PD+ L+
Sbjct: 573 MPFEPDIRVLGTLL 586
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 201/639 (31%), Positives = 325/639 (50%), Gaps = 15/639 (2%)
Query: 3 TSGFHPNVIT-------YNHLLL-----MYVKFSRINDAQKLFDEMPERNVISWSALISG 50
T H + IT Y+H LL Y F A+KLFDE+ ++ SW+A+I
Sbjct: 37 TKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRM 96
Query: 51 FSQIGMPEVALNYFRLMVCCVLE-PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL 109
++ G+ AL F M+ P+ YTY + AC G IH R SG +
Sbjct: 97 YTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDS 156
Query: 110 NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
++ V N L+ MY CG + A+ VFD ER +SW ++++ Y + G L +F
Sbjct: 157 DAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMI 216
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
G+ + SVL C+ L L+VG ++H+LV L D V L+++YAKC +D
Sbjct: 217 GKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMD 276
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A +F + D+ +W+ ++ GY G A A+ L M + P+ VT + VL A A
Sbjct: 277 EAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACA 336
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ GR LH I+ S V ++D Y+KC + S + F + + WNA
Sbjct: 337 SLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNA 396
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I+G + + +AIEL K ML E PN T +++L + + ++ + H +++ G
Sbjct: 397 IISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSG 456
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHL--SSKNLVSWNTMLVGYAQHGLGREALEI 467
F S + + + L+D+Y+KCG L A +F+ + K++++W+ ++ GY HG G A+ +
Sbjct: 457 FLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISL 516
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA 527
+ M ++ +KPN+ TF +L AC H GLV+EG F M+ D+ +S R DH V+ L
Sbjct: 517 FDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLG 576
Query: 528 CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIM 587
G+ AYE I++ PN VW LL C H+++ LG AA+ + +P +T +++
Sbjct: 577 RAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVL 636
Query: 588 LSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
L+N+Y+ W + VR +M L+K S E++N
Sbjct: 637 LANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRN 675
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 239/458 (52%), Gaps = 10/458 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SGF + N L+ MY+ + A+++FD M ER ++SW+ +I+G+ + G + AL
Sbjct: 150 VMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEAL 209
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M+ +EP+ T V + C+ + G+ +H + L + V N L++MY
Sbjct: 210 MVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMY 269
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + AQ +F +R+ +SW ++++ Y G+ L + + + V + + A
Sbjct: 270 AKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLA 329
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SVL ACA L +LK G +H + LE + V LI++YAKC ++L+ RVFS
Sbjct: 330 SVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQ 389
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
W+A+I G G + +AI+LF +M + P++ T + +L A+A + + R +H
Sbjct: 390 RTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMH 449
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM--DEHDVVSWNALIAGHLASCH 359
+I+ GF S VA ++D YSKC LE + F+ + + D+++W+A+IAG+ H
Sbjct: 450 GYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGH 509
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG-- 417
AI L M+ G PN T+++IL+ S ++ G +++ D+ + +
Sbjct: 510 GETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLE---DNQMSLRTD 566
Query: 418 --SALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTML 452
+ ++D+ + GRL +A ++ ++ + N W +L
Sbjct: 567 HYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALL 604
>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 884
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 195/657 (29%), Positives = 344/657 (52%), Gaps = 3/657 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEV 59
++ G+H N L+ MY K ++ A++LFD E+ + + W++++S +S G
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 267
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLI 118
L FR M PN YT V A++AC A+ GKEIH + +S + +V N LI
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALI 327
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY +CG + A+ + + ++W SL+ Y Q + L+ F +G E
Sbjct: 328 AMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEV 387
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S S++ A L NL GM++H+ V K + + V LI++Y+KC R F +
Sbjct: 388 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 447
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
DL +W+ +I GYAQ EA++LF + + E+ +L A + +K + +
Sbjct: 448 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVK 507
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H I++ G T + N ++D Y KC + + + F+ + DVVSW ++I+ +
Sbjct: 508 EIHCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNG 566
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ EA+EL + M+ G + IL+ ++ + A+ G++ HC +++ GF I
Sbjct: 567 NESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV 626
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
A+VDMYA CG L A+ VFD + K L+ + +M+ Y HG G+ A+E++ M+ + P
Sbjct: 627 AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSP 686
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ +F+ +L AC H GL++EG + M ++ + P +H +V + A+EF
Sbjct: 687 DHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEF 746
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
+K EP VW LL+ C++H + +G AA+++L +P++ +++SNV+AE W
Sbjct: 747 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRW 806
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
++ KVR MK ++K GCSW E+ K+H F+ + + +++E +++++ L
Sbjct: 807 NDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKL 863
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 273/522 (52%), Gaps = 4/522 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY K ++DA+K+FDEMP+R +W+ +I + G P AL + M +
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
++ + ACA D RSG E+H + + G + N L++MY K LS+A+ +FD
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 136 ASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
E+ +++ W S+LSSY G+ + L++F +G A + ++ S L AC K
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 195 VGMQIHSLVFKCALEFDK-FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G +IH+ V K + + +V LI +Y +C K+ A R+ + D+ W++LI GY
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q EA++ F M ++G EV+ + ++ A + + G +LH+ +IK G+ S
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V NT++D YSKC L + F M + D++SW +IAG+ + + EA+EL +D+ +
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
+ +IL SS + ++ K+ HC I++ G + VI + LVD+Y KC + A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYA 540
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+VF+ + K++VSW +M+ A +G EA+E++ M E + + + +LSA +
Sbjct: 541 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASL 600
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+ +G ++R G +VV ++AC G + A
Sbjct: 601 SALNKGREIHCYLLRK-GFCLEGSIAVAVVDMYACCGDLQSA 641
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 229/417 (54%), Gaps = 7/417 (1%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRS--GLELNSHVSNCLINMYGKCGLLSSAQFVF 134
+ YV + C R G+++H R++++ EL+ ++ L+ MYGKCG L A+ VF
Sbjct: 83 FAYV--LELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVF 139
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D +R + +W +++ +Y GE L ++ R GV + S ++L ACA L +++
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 199
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP-DLTAWSALIGGY 253
G ++HSL+ K F+ L+++YAK + L A R+F Q D W++++ Y
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG-FSSF 312
+ GK+ E ++LF +M +G P+ T L A G+++H+ ++K SS
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+V N ++ Y++C + ++ + +M+ DVV+WN+LI G++ + Y EA+E DM+
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
GH + + ++I+ S + + G + H ++K G+DSN+ +G+ L+DMY+KC
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 439
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ F + K+L+SW T++ GYAQ+ EALE++ + + +++ ++ +L A
Sbjct: 440 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 4/206 (1%)
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSNV 414
+C G E + + + + ++ +L + A+ G+Q H I K P F+ +
Sbjct: 58 ACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF 117
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ G LV MY KCG L+DA KVFD + + +WNTM+ Y +G AL +Y M+
Sbjct: 118 LAGK-LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
+ ++F +L AC + + G +S++ G + ++V ++A
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSE-LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKT 560
A + + V+W +LS T
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYST 261
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 278/510 (54%), Gaps = 21/510 (4%)
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF--SCASVLGACAVLGNLKVGMQIH 200
+SW + G + +FL R S S + L +CA LG +G +H
Sbjct: 15 LSWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPASLPAALKSCAALGLSALGASLH 74
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCE-------------------KLDLASRVFSNIQLP 241
+L + D+F A L+NLY K L+ +VF +
Sbjct: 75 ALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRKVFDEMIER 134
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W+ L+ G A+ G+ EA+ L KM+ G P T S VL FA+ + G ++H
Sbjct: 135 DVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEVH 194
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
++ GF + FV ++++D Y+ C + S+K FD + D + WN+++AG +
Sbjct: 195 GFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQNGSVE 254
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA+ + + ML G P T+S+++ + ++ ++ +GKQ H +++ GF+ NV I S+L+
Sbjct: 255 EALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSSLI 314
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY KCG ++ A +FD + S ++VSW M++GYA HG REAL ++ M+ KPN
Sbjct: 315 DMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHI 374
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL+AC H GLV++GW YF SM +GI P ++H A++ + G+ AY FI
Sbjct: 375 TFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFISK 434
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
I+P VW LL C+ HK+ +L A+KI+ +P +H++LSN+Y+ + W+E
Sbjct: 435 MQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEA 494
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
A +RK M++K +KKD CSW E++NK+H F
Sbjct: 495 AHLRKSMRKKGMKKDPACSWIEVKNKLHVF 524
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 207/460 (45%), Gaps = 23/460 (5%)
Query: 37 PERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYY--TYVGAVSACASRGDARS 94
P +SW+ I + G A++ F M C + + A+ +CA+ G +
Sbjct: 10 PWPPPLSWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPASLPAALKSCAALGLSAL 69
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMY-------------------GKCGLLSSAQFVFD 135
G +H RSG + +N L+N+Y G L S + VFD
Sbjct: 70 GASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRKVFD 129
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+ER+ +SW +L+ + G H L + + G F+ +SVL A ++K
Sbjct: 130 EMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKR 189
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G ++H + + D FV LI++YA C + D + +VF N+ + D W++++ G AQ
Sbjct: 190 GSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQ 249
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G EA+ +F +M +G+ P VTFS ++ ++ G+QLH+ +I+ GF F+
Sbjct: 250 NGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFI 309
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
+++++D Y KC + + FD M DVVSW A+I G+ EA+ L + M
Sbjct: 310 SSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNA 369
Query: 376 CPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
PN T+ +L S ++ G K G + +AL D+ + G L++A
Sbjct: 370 KPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAY 429
Query: 435 KVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQE 473
+ K S W+T+L H A E+ + E
Sbjct: 430 NFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME 469
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 171/361 (47%), Gaps = 32/361 (8%)
Query: 2 ITSGFHPNVITYNHLLLMYVKF-------------------SRINDAQKLFDEMPERNVI 42
I SG + T N LL +Y K + + +K+FDEM ER+V+
Sbjct: 78 IRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRKVFDEMIERDVV 137
Query: 43 SWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM 102
SW+ L+ G ++ G AL R M P+ +T + A D + G E+HG
Sbjct: 138 SWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEVHGFA 197
Query: 103 YRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGL 162
R+G + + V + LI+MY C + VFD R+ I W S+L+ Q G L
Sbjct: 198 VRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQNGSVEEAL 257
Query: 163 KIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
IF ++GV + +S++ C L +L+ G Q+H+ V + E + F++ LI++Y
Sbjct: 258 GIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSSLIDMY 317
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
KC ++ +A +F + PD+ +W+A+I GYA G A EA+ LF +M P+ +TF
Sbjct: 318 CKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFL 377
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN--TVLDFYSKCELLEESLKTFDEMD 340
VL A + H+ ++ G+ F +++ ++ C L + L E+D
Sbjct: 378 AVLTACS-----------HAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELD 426
Query: 341 E 341
E
Sbjct: 427 E 427
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF NV + L+ MY K I+ A +FD M +V+SW+A+I G++ G A
Sbjct: 298 VIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREA 357
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY-RSGLELNSHVSNCLIN 119
L F M +PN+ T++ ++AC+ G G + M G+ L +
Sbjct: 358 LVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALAD 417
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+ G+ G L A F+ ++ + W +LL + C H K +L+ + I E
Sbjct: 418 ILGRAGELDEAYNFISKMQIKPTASVWSTLLRA---CRVH----KNTMLAEEVAKKIMEL 470
Query: 179 SCASVLGACAVLGNL 193
S+ G+ VL N+
Sbjct: 471 EPRSI-GSHVVLSNM 484
>gi|297813281|ref|XP_002874524.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320361|gb|EFH50783.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 688
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 207/659 (31%), Positives = 346/659 (52%), Gaps = 37/659 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G NV N+++ MYV F ++DA K+FDEM ERN+++W+ ++SG++ G P A
Sbjct: 31 IVKQGISQNVFLANNVISMYVDFRLLSDAHKVFDEMTERNIVTWTTMVSGYTCDGKPSKA 90
Query: 61 LNYFRLMVCCVLEP-NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ +R MV E N + Y + AC GD + G ++ R+ + L+ + + N +++
Sbjct: 91 IELYRRMVESQEEAANEFIYSAVLKACGLVGDIQLGSFVYERIGKENLKGDVVLMNSVVD 150
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-------------L 166
M+ K G LS A F L NS SW +L+S YC+ G + +F L
Sbjct: 151 MFVKNGRLSEANSSFKEILRPNSTSWNTLISGYCKAGMVEEAVSLFNRIPQPNIVSWNCL 210
Query: 167 LS-----------------RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+S ++ G+ + F+ L AC+ G L +G Q+H V K LE
Sbjct: 211 ISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHGCVVKSGLE 270
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL----TAWSALIGGYAQLGKACEAIDL 265
F LI++Y+ C L A+ VF + P L W++++ G+ + A+ L
Sbjct: 271 SSPFALSALIDMYSNCGSLSDAADVFHQ-EKPALCNTVAVWNSMLSGFLINEENEAALGL 329
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
+ ++ S L T S L ++ G Q+HSL++ G+ V + ++D ++
Sbjct: 330 LLLLYKSDLCFDSYTLSGALKICINLVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHAN 389
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
++E+ K F + D+++++ LI G + S A L ++++ G + + S+I
Sbjct: 390 VGNIQEAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSSI 449
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L + S + ++ GKQ H +K G+ S V +AL DMY KCG ++++ +FD + +++
Sbjct: 450 LKVCSSLASLGCGKQIHGLCIKKGYQSEPVTATALGDMYVKCGEIDNSVVLFDGMLERDV 509
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
VSW ++VG+ Q+G EA + + M ++I+PN+ TF+G+LSAC H GL+EE +
Sbjct: 510 VSWTGIIVGFGQNGRVEEAFQYFHKMINSEIEPNEVTFLGLLSACRHSGLLEEARSILET 569
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
M ++G+ P ++H VV L G+ + A E IK P+EP+K +W LL+ C THK+
Sbjct: 570 MKCEYGLEPYLEHYYCVVDLLGQAGRFQEAEELIKKMPLEPDKTIWMSLLTACGTHKNAG 629
Query: 566 LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
L AEK+L PED S + LSN YA MWD+ ++VR+ K K K++G SW E
Sbjct: 630 LITVIAEKLLKAFPEDPSLYTSLSNAYATLGMWDQLSEVREAAK-KLGAKESGMSWIEF 687
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/597 (23%), Positives = 273/597 (45%), Gaps = 80/597 (13%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
+ G+ I + + G+ N ++N +I+MY LLS A VFD ERN ++W +++S Y
Sbjct: 22 KRGESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAHKVFDEMTERNIVTWTTMVSGY 81
Query: 153 CQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
G+ ++++ + A +EF ++VL AC ++G++++G ++ + K L+ D
Sbjct: 82 TCDGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGLVGDIQLGSFVYERIGKENLKGD 141
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF----- 266
+ +++++ K +L A+ F I P+ T+W+ LI GY + G EA+ LF
Sbjct: 142 VVLMNSVVDMFVKNGRLSEANSSFKEILRPNSTSWNTLISGYCKAGMVEEAVSLFNRIPQ 201
Query: 267 -------------------------VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
V+M GL+ L A + G+QLH
Sbjct: 202 PNIVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLH 261
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE---HDVVSWNALIAGHLASC 358
++K G S F + ++D YS C L ++ F + + V WN++++G L +
Sbjct: 262 GCVVKSGLESSPFALSALIDMYSNCGSLSDAADVFHQEKPALCNTVAVWNSMLSGFLINE 321
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
A+ LL + C + YT S L I ++ + G Q H +V G++ + ++GS
Sbjct: 322 ENEAALGLLLLLYKSDLCFDSYTLSGALKICINLVNLRLGLQVHSLVVVSGYELDYIVGS 381
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
LVD++A G + +A K+F L +K++++++ ++ G + G +L Y + K+
Sbjct: 382 ILVDLHANVGNIQEAHKLFHRLPNKDIIAFSGLIRGCVKSGF--NSLAFYLFRELIKLGL 439
Query: 479 NDNTFI--GVLSAC-----------VHIGLVEEGWH------------------YFNSMI 507
+ + FI +L C +H +++G+ NS++
Sbjct: 440 DADQFIVSSILKVCSSLASLGCGKQIHGLCIKKGYQSEPVTATALGDMYVKCGEIDNSVV 499
Query: 508 RDHGISPRMDHIA--SVVHLFACRGQTRRAYEF---IKSSPIEPNKVVWRCLLSGCKTHK 562
G+ R D ++ ++ F G+ A+++ + +S IEPN+V + LLS C+ H
Sbjct: 500 LFDGMLER-DVVSWTGIIVGFGQNGRVEEAFQYFHKMINSEIEPNEVTFLGLLSACR-HS 557
Query: 563 DLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVR---KIMKEKSLKKD 616
L+ A IL T + L + Y ++ + + + +++K+ L+ D
Sbjct: 558 GLL---EEARSILETMKCEYGLEPYLEHYYCVVDLLGQAGRFQEAEELIKKMPLEPD 611
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 185/415 (44%), Gaps = 42/415 (10%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+ L C + K G I + + K + + F+A +I++Y L A +VF +
Sbjct: 9 AAGLRHCGKIQAFKRGESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAHKVFDEMTE 68
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVL---GAFADVK---- 292
++ W+ ++ GY GK +AI+L+ +M S +E +S VL G D++
Sbjct: 69 RNIVTWTTMVSGYTCDGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGLVGDIQLGSF 128
Query: 293 --ETIGGRQLHSLIIKMGFSSFTFVA----------------------NTVLDFYSKCEL 328
E IG L ++ M FV NT++ Y K +
Sbjct: 129 VYERIGKENLKGDVVLMNSVVDMFVKNGRLSEANSSFKEILRPNSTSWNTLISGYCKAGM 188
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+EE++ F+ + + ++VSWN LI+G + A+E L M EG + + L
Sbjct: 189 VEEAVSLFNRIPQPNIVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKA 247
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS---KNL 445
S + GKQ H C+VK G +S+ SAL+DMY+ CG L+DA VF +
Sbjct: 248 CSFGGLLTMGKQLHGCVVKSGLESSPFALSALIDMYSNCGSLSDAADVFHQEKPALCNTV 307
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
WN+ML G+ + AL + ++ ++ + + T G L C+++ + G +S
Sbjct: 308 AVWNSMLSGFLINEENEAALGLLLLLYKSDLCFDSYTLSGALKICINLVNLRLGLQ-VHS 366
Query: 506 MIRDHGISPRMDHIAS--VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
++ G +D+I +V L A G + A++ P + + + L+ GC
Sbjct: 367 LVVVSGY--ELDYIVGSILVDLHANVGNIQEAHKLFHRLP-NKDIIAFSGLIRGC 418
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
I A + G+ IVK G NV + + ++ MY L+DA KVFD ++ +N+V+W TM
Sbjct: 18 IQAFKRGESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAHKVFDEMTERNIVTWTTM 77
Query: 452 LVGYAQHGLGREALEIYSMMQENKIK-PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
+ GY G +A+E+Y M E++ + N+ + VL AC +G ++ G + + +++
Sbjct: 78 VSGYTCDGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGLVGDIQLGSFVYERIGKEN 137
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG-CKT 560
+ + + SVV +F G+ A K + PN W L+SG CK
Sbjct: 138 -LKGDVVLMNSVVDMFVKNGRLSEANSSFK-EILRPNSTSWNTLISGYCKA 186
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 184/583 (31%), Positives = 318/583 (54%), Gaps = 12/583 (2%)
Query: 93 RSGKEIHGRMYRSGLELNSHVS----NCLINMYGKCGLLSSAQFVFDA--SLERNSISWV 146
+ +IH ++ + N+H S N L+ +Y KCG + +F+ N ++W
Sbjct: 114 KHATQIHSQLVTT----NNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWT 169
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+L++ + + L F R +G+ + F+ +++L ACA L G QIH+L+ K
Sbjct: 170 TLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKH 229
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
D FVA L+++YAKC + LA VF + +L +W+++I G+ + AI +F
Sbjct: 230 CFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVF 289
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
++ S G P +V+ S VL A A + E G+Q+H I+K G +V N+++D Y KC
Sbjct: 290 REVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKC 347
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
L E++ K F + DVV+WN +I G ++ +A + M+ EG P+ +YS++
Sbjct: 348 GLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLF 407
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+ S+ I A+ G H ++K G N I S+LV MY KCG + DA +VF N+V
Sbjct: 408 HASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVV 467
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
W M+ + QHG EA++++ M + P TF+ VLSAC H G +++G+ YFNSM
Sbjct: 468 CWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSM 527
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVL 566
H I P ++H A +V L G+ A FI+S P EP+ +VW LL C H ++ +
Sbjct: 528 ANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEM 587
Query: 567 GRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
GR AE++ +P++ +++LSN+Y M +E +VR++M ++K++GCSW +++N
Sbjct: 588 GREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKN 647
Query: 627 KMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ F+ + + + +++ ++ +L + GYV + ++++
Sbjct: 648 RTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATN 690
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 250/512 (48%), Gaps = 25/512 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPE 58
++T+ H ++ N LLL+Y K I+ LF+ P NV++W+ LI+ S+ P
Sbjct: 123 LVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPF 182
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
AL +F M + PN++T+ + ACA G++IH +++ + V+ L+
Sbjct: 183 QALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALL 242
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+MY KCG + A+ VFD RN +SW S++ + + ++G I + + +
Sbjct: 243 DMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVK--NKLYGRAIGVFREVLSLGPDQV 300
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S +SVL ACA L L G Q+H + K L +V L+++Y KC + A+++F
Sbjct: 301 SISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGG 360
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ W+ +I G + +A F M G+ P E ++S + A A + G
Sbjct: 361 GDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGT 420
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG-HLAS 357
+HS ++K G + ++++++ Y KC + ++ + F E EH+VV W A+I H
Sbjct: 421 MIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHG 480
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDS 412
C EAI+L ++ML EG P T+ ++L+ S I+ G + +KPG +
Sbjct: 481 C-ANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEH 539
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIY 468
+ +VD+ + GRL +A + + + + + W +L +H +GRE E
Sbjct: 540 Y----ACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAE-- 593
Query: 469 SMMQENKIKP-NDNTFIGVLSACVHIGLVEEG 499
+ K++P N ++ + + + G++EE
Sbjct: 594 ---RLFKLEPDNPGNYMLLSNIYIRHGMLEEA 622
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 14/270 (5%)
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS--GLMPSEVTFS------YVLGAFA 289
+Q+ A S + LG + ++++F+S +P FS ++L A
Sbjct: 49 LQVQKENARSKPNSNFEGLGPMSREVAFWLQLFTSYQSGVPKFHQFSSVPDLKHLLNNAA 108
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM--DEHDVVSW 347
+K Q+HS ++ + NT+L Y+KC + +L F+ +VV+W
Sbjct: 109 KLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTW 168
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
LI S +A+ M G PN +T+S IL + + G+Q H I K
Sbjct: 169 TTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHK 228
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
F ++ + +AL+DMYAKCG + A VFD + +NLVSWN+M+VG+ ++ L A+ +
Sbjct: 229 HCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGV 288
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ + + P+ + VLSAC GLVE
Sbjct: 289 FREVL--SLGPDQVSISSVLSACA--GLVE 314
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 104/228 (45%), Gaps = 14/228 (6%)
Query: 372 FEGHCPNLYTYSNI------LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
++ P + +S++ LN ++ + +++ Q H +V +++ + L+ +YA
Sbjct: 84 YQSGVPKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYA 143
Query: 426 KCGRLNDARKVFDHL--SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
KCG ++ +F+ S N+V+W T++ ++ +AL ++ M+ I PN TF
Sbjct: 144 KCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTF 203
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+L AC H L+ EG +++I H +++ ++A G A P
Sbjct: 204 SAILPACAHAALLSEG-QQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMP 262
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAA--EKILSTDPEDTSAHIMLS 589
N V W ++ G +K + GR ++LS P+ S +LS
Sbjct: 263 -HRNLVSWNSMIVGFVKNK--LYGRAIGVFREVLSLGPDQVSISSVLS 307
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 202/644 (31%), Positives = 329/644 (51%), Gaps = 5/644 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG + + L+ Y KF + A+K+FD MPERNV+ W+ +I +S+ G A
Sbjct: 87 ILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEA 146
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M ++P+ T + + + + +HG G + ++SN ++N+
Sbjct: 147 FSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQC---LHGCAILYGFMSDINLSNSMLNV 203
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG + ++ +FD R+ +SW SL+S+Y Q G L + R G +
Sbjct: 204 YGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTF 263
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A G LK+G +H + + D V LI +Y K K+D+A R+F
Sbjct: 264 GSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSD 323
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+A+I G Q G A +A+ +F +M G+ PS T + V+ A A + G +
Sbjct: 324 KDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSI 383
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
I++ N+++ Y+KC L++S FD M+ D+VSWNA++ G+ + +
Sbjct: 384 LGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYV 443
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ L +M + P+ T ++L + + GK H +++ G +++ ++L
Sbjct: 444 CEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSL 503
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMY KCG L+ A++ F+ + S +LVSW+ ++VGY HG G AL YS E+ +KPN
Sbjct: 504 VDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNH 563
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
F+ VLS+C H GLVE+G + + SM +D GI+P ++H A VV L + G+ AY K
Sbjct: 564 VIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYK 623
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+P V +L C+ + + LG A IL P D + L++ YA N W+E
Sbjct: 624 KKFPDPVLDVLGIILDACRANGNNELGDTIANDILMLRPMDAGNFVQLAHCYASINKWEE 683
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST--SRFAQFQGI 642
+ M+ LKK G S+ ++ + F T + QFQ I
Sbjct: 684 VGEAWTYMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEI 727
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 250/519 (48%), Gaps = 5/519 (0%)
Query: 43 SWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM 102
S +A I+ S G L + M+ + + YT+ + AC+ G +H R+
Sbjct: 28 SVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRI 87
Query: 103 YRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGL 162
SGL L++++++ LIN Y K G A+ VFD ERN + W +++ Y + G
Sbjct: 88 LVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAF 147
Query: 163 KIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
+F R+ G+ S + S+L + L +++ +H D ++ ++N+Y
Sbjct: 148 SLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQC---LHGCAILYGFMSDINLSNSMLNVY 204
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
KC ++ + ++F + DL +W++LI YAQ+G CE + L M G TF
Sbjct: 205 GKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFG 264
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
VL A E GR LH I++ GF V +++ Y K ++ + + F+ +
Sbjct: 265 SVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDK 324
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
DVV W A+I+G + + +A+ + + ML G P+ T ++++ + + + G
Sbjct: 325 DVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSIL 384
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
I++ +V ++LV MYAKCG L+ + VFD ++ ++LVSWN M+ GYAQ+G
Sbjct: 385 GYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVC 444
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
EAL +++ M+ + P+ T + +L C G + G + +S + +G+ P + S+
Sbjct: 445 EALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLG-KWIHSFVIRNGLRPCILVDTSL 503
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
V ++ G A P + V W ++ G H
Sbjct: 504 VDMYCKCGDLDTAQRCFNQMP-SHDLVSWSAIIVGYGYH 541
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/486 (35%), Positives = 281/486 (57%), Gaps = 1/486 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L ACA G++ +G +H K + + L+++YAKC LD A VF + +
Sbjct: 3 SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ W++LI YA+ G + EAI LF +M G+ P T + VL A A G+ +H
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ I + S FV N ++D Y+KC +E++ F EM D++SWN +I G+ +
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA+ L DM+ E P+ T + IL + + +++ GK+ H I++ GF S+ + +ALV
Sbjct: 183 EALSLFGDMVLEMK-PDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALV 241
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY KCG AR +FD + +K+L++W M+ GY HG G A+ ++ M++ I+P++
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEV 301
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
+FI +L AC H GL++EGW +FN M + + P+++H A +V L A G+ AY+FIKS
Sbjct: 302 SFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKS 361
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
PIEP+ +W LLSGC+ H D+ L AE + +PE+T +++L+N YAEA W+E
Sbjct: 362 MPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEV 421
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
K+R+ + + LKK+ GCSW E+++K+H F + Q + ++ +L + + GY
Sbjct: 422 KKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYF 481
Query: 662 PDPIYS 667
P Y+
Sbjct: 482 PKTRYA 487
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 193/385 (50%), Gaps = 11/385 (2%)
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
V + ACA+ GD G+ +HG ++ + + N L++MY KCG+L A VFD
Sbjct: 2 VSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSV 61
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQI 199
R ++W SL+++Y + G +++F + GV+ F+ +VL ACA G+L+ G +
Sbjct: 62 RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDV 121
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
H+ + + ++ + FV L+++YAKC ++ A+ VF + + D+ +W+ +IGGY++
Sbjct: 122 HNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLP 181
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
EA+ LF M + P T + +L A A + G+++H I++ GF S VAN +
Sbjct: 182 NEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANAL 240
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
+D Y KC + + FD + D+++W +IAG+ AI +M G P+
Sbjct: 241 VDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDE 300
Query: 380 YTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
++ +IL S ++ G + C VKP + I VD+ A+ G+L A
Sbjct: 301 VSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACI----VDLLARSGKLAMAY 356
Query: 435 KVFDHLS-SKNLVSWNTMLVGYAQH 458
K + + W +L G H
Sbjct: 357 KFIKSMPIEPDATIWGALLSGCRIH 381
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 189/417 (45%), Gaps = 34/417 (8%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N LL MY K ++ A +FD M R V++W++LI+ +++ G+ + A+ F M +
Sbjct: 37 NTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVS 96
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ +T + ACA G +GK++H + + ++ N V N L++MY KCG + A V
Sbjct: 97 PDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSV 156
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIF----LLSRKSGVAISEFSCASVLGACAV 189
F ++ ISW +++ Y + L +F L + G + A +L ACA
Sbjct: 157 FLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKPDGTTL-----ACILPACAS 211
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
L +L G ++H + + D+ VA L+++Y KC LA +F I DL W+ +
Sbjct: 212 LASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVM 271
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I GY G AI F +M +G+ P EV+F +L A + HS ++ G+
Sbjct: 272 IAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACS-----------HSGLLDEGW 320
Query: 310 SSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLA 356
F + + ++D ++ L + K M E D W AL++G
Sbjct: 321 RFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRI 380
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
H + E + + +FE N Y + N ++ E K+ I + G N
Sbjct: 381 H-HDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKN 436
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 134/246 (54%), Gaps = 3/246 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N+ N L+ MY K + DA +F EMP +++ISW+ +I G+S+ +P AL+ F MV
Sbjct: 133 NIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMV 192
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
++P+ T + ACAS GKE+HG + R+G + V+N L++MY KCG+
Sbjct: 193 -LEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPV 251
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ +FD ++ I+W +++ Y G + + F R++G+ E S S+L AC+
Sbjct: 252 LARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACS 311
Query: 189 VLGNLKVGMQIHSLVF-KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAW 246
G L G + +++ +C ++ +++L A+ KL +A + ++ + PD T W
Sbjct: 312 HSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIW 371
Query: 247 SALIGG 252
AL+ G
Sbjct: 372 GALLSG 377
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GF + N L+ MYVK A+ LFD +P +++I+W+ +I+G+ G A
Sbjct: 225 ILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNA 284
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY-RSGLELNSHVSNCLIN 119
+ F M +EP+ +++ + AC+ G G M ++ C+++
Sbjct: 285 ITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVD 344
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLS 150
+ + G L+ A +F+ +E ++ W +LLS
Sbjct: 345 LLARSGKLAMAYKFIKSMPIEPDATIWGALLS 376
>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
Length = 826
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 194/587 (33%), Positives = 310/587 (52%), Gaps = 2/587 (0%)
Query: 40 NVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIH 99
NVISW++ IS + E+A+ F++M+ PN+ T + + A + G + I
Sbjct: 53 NVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVIC 112
Query: 100 GRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHV 159
G + + G E V+ LI Y + +F+ + ++ + W +++S+ + G++
Sbjct: 113 GSVIKLGFESEVSVATALIGFYSDYDM-GIVWKIFNQTPIKDLVLWSAMVSACVKSGQYG 171
Query: 160 HGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI 219
+IF + GV + S S+L ACA +G L G +IH K V L+
Sbjct: 172 EAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLV 231
Query: 220 NLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEV 279
++YAKC + VF I DL +W+ +I G + EA F +M S E
Sbjct: 232 DMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADET 291
Query: 280 TFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
++ A E G H ++K G +F + +L Y+K LE ++ FD++
Sbjct: 292 IVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQL 351
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
++ D +SW+A+I+ H S H A+E K M PN T+ ++L S I A E G+
Sbjct: 352 NKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGE 411
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
K G+ SN + SAL+D+Y K GR+N R +F+ + +K+LV W++M+ GY +G
Sbjct: 412 SIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNG 471
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
G EALE +S M +KPN+ FI VLSAC H GL EGW F+SM + +GI P++ H
Sbjct: 472 CGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHY 531
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK-THKDLVLGRYAAEKILSTD 578
A +V L + RG A +F+ P+EP+K +W LL+GC+ TH + + AE+++ D
Sbjct: 532 ACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERLIGLD 591
Query: 579 PEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQ 625
P++TS +++LSN+YAE W + ++RK++ EK LKK+ G S E Q
Sbjct: 592 PQNTSYYVILSNLYAEQGRWGDVERLRKLVDEKGLKKEMGYSMIEAQ 638
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 230/495 (46%), Gaps = 14/495 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF V L+ Y + + K+F++ P ++++ WSA++S + G A
Sbjct: 115 VIKLGFESEVSVATALIGFYSDYD-MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEA 173
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
FR M +EPN+ + V + ACA+ G GKEIHG + ++V N L++M
Sbjct: 174 FEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDM 233
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC ++ VFD LE++ ISW +++ + K F + S E
Sbjct: 234 YAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIV 293
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLASRVFSNI 238
++ A K G+ H + K L FV++G L+ +YAK +L+ A VF +
Sbjct: 294 QDLIVAIIQADEHKFGIAFHGFLLKNGLL--AFVSIGTALLQMYAKFGELESAIIVFDQL 351
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D +WSA+I +A A++ F +M S+ P+E+TF +L A + + G
Sbjct: 352 NKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGE 411
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+ + K G+ S F+++ ++D Y K + + F+E+ D+V W+++I G+ +
Sbjct: 412 SIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNG 471
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFDSNVVIG 417
EA+E +ML G PN + ++L+ S G + K G +
Sbjct: 472 CGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHY 531
Query: 418 SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVG-YAQHGLGREALEIYSMMQENK 475
+ +VD+ ++ G + A + + + + W +L G + HG ++EI ++ E
Sbjct: 532 ACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHG----SIEIAELVAERL 587
Query: 476 I--KPNDNTFIGVLS 488
I P + ++ +LS
Sbjct: 588 IGLDPQNTSYYVILS 602
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 24/258 (9%)
Query: 313 TFVANTVLDFYSKCEL-----LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
F+ N+ Y + EE ++ E D +V+SW + I+ + A+ L
Sbjct: 20 VFIRNSAYSLYYRSMFNTYAYYEEPVEFHGEKD--NVISWTSKISSLVKQNQSELAVGLF 77
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
K ML PN T +++ S + + + ++K GF+S V + +AL+ Y+
Sbjct: 78 KMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDY 137
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
+ K+F+ K+LV W+ M+ + G EA EI+ MQ + ++PN + + +L
Sbjct: 138 D-MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSIL 196
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGIS-PRMDHIASVVH-----LFA-CRGQTRRAYEFIK 540
AC ++G + F I HG S +M H + VH ++A CR +A +
Sbjct: 197 PACANVGAL-----LFGKEI--HGFSIKKMFHPLTNVHNSLVDMYAKCR--NFKASMLVF 247
Query: 541 SSPIEPNKVVWRCLLSGC 558
+E + + W ++ GC
Sbjct: 248 DQILEKDLISWTTIIRGC 265
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/626 (30%), Positives = 320/626 (51%), Gaps = 2/626 (0%)
Query: 40 NVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIH 99
N S LI+ + + P A + M E + + + AC G+E+H
Sbjct: 88 NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVH 147
Query: 100 GRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHV 159
G + ++G + V N LI MY + G L+ A+ +FD ++ +SW +++ SY + G
Sbjct: 148 GFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLD 207
Query: 160 HGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM--G 217
L + V SE S+ A L +LK+G +H+ V + V +
Sbjct: 208 EALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTA 267
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
LI++Y KCE L A RVF + + +W+A+I Y E + LFVKM G+ P+
Sbjct: 268 LIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPN 327
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
E+T ++ G+ LH+ ++ GF+ +A +D Y KC + + FD
Sbjct: 328 EITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFD 387
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
D++ W+A+I+ + + EA ++ M G PN T ++L I + ++E
Sbjct: 388 SFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEM 447
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
GK H I K G ++++ ++ VDMYA CG ++ A ++F + +++ WN M+ G+A
Sbjct: 448 GKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAM 507
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
HG G ALE++ M+ + PND TFIG L AC H GL++EG F+ M+ + G +P+++
Sbjct: 508 HGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVE 567
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILST 577
H +V L G A+E IKS P+ PN V+ L+ CK HK++ LG +AA++ LS
Sbjct: 568 HYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSL 627
Query: 578 DPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFA 637
+P + ++++SN+YA AN W + A +R+ MK++ + K+ G S E+ +H F
Sbjct: 628 EPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDRE 687
Query: 638 QFQGIDLHEVMNQLSVHLFDGGYVPD 663
++E+++++ L D GY PD
Sbjct: 688 HPDAKKVYEMIDEMREKLEDAGYTPD 713
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 229/462 (49%), Gaps = 4/462 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GFH +V N L++MY + + A+ LFD++ ++V+SWS +I + + G+ + A
Sbjct: 150 VVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEA 209
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC--LI 118
L+ R M ++P+ + A D + GK +H + R+G S V C LI
Sbjct: 210 LDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALI 269
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+MY KC L+ A+ VFD + + ISW +++++Y C G+++F+ G+ +E
Sbjct: 270 DMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEI 329
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S++ C G L++G +H+ + +A I++Y KC + A VF +
Sbjct: 330 TMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSF 389
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ DL WSA+I YAQ EA D+FV M G+ P+E T +L A G+
Sbjct: 390 KSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGK 449
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+HS I K G + + +D Y+ C ++ + + F E + D+ WNA+I+G
Sbjct: 450 WIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHG 509
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIG 417
H A+EL ++M G PN T+ L+ S ++ GK+ H + + GF V
Sbjct: 510 HGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHY 569
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH 458
+VD+ + G L++A ++ + + N+ + + L H
Sbjct: 570 GCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLH 611
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 182/352 (51%), Gaps = 4/352 (1%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MYVK + A+++FD + + ++ISW+A+I+ + + F M+ + PN
Sbjct: 268 LIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPN 327
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
T + V C + G GK +H R+G L+ ++ I+MYGKCG + SA+ VFD
Sbjct: 328 EITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFD 387
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+ ++ + W +++SSY Q IF+ G+ +E + S+L CA G+L++
Sbjct: 388 SFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEM 447
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G IHS + K ++ D + +++YA C +D A R+F+ D++ W+A+I G+A
Sbjct: 448 GKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAM 507
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL-HSLIIKMGFSSFTF 314
G A++LF +M + G+ P+++TF L A + G++L H ++ + GF+
Sbjct: 508 HGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVE 567
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
++D + LL+E+ + M + A+ LA+C + I+L
Sbjct: 568 HYGCMVDLLGRAGLLDEAHELIKSMPMRPNI---AVFGSFLAACKLHKNIKL 616
>gi|297604972|ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group]
gi|255676606|dbj|BAF18344.2| Os05g0581300 [Oryza sativa Japonica Group]
Length = 704
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 219/673 (32%), Positives = 343/673 (50%), Gaps = 23/673 (3%)
Query: 14 NHL--LLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG-MPEVALNYFRLMVCC 70
+HL L + SR+ DA +LFD MP R+ ++++ L++G + G P + RL
Sbjct: 3 DHLARLKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRASS 62
Query: 71 V-LEP-NYYTYVGAVSACASRGDAR---SGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
L P + + +CA+ DAR +H RS + V+ L ++Y K G
Sbjct: 63 PPLAPADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAG 122
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L A VFD +N +SW +L++S + G L+ F R SGV ++ A+ L
Sbjct: 123 CLGLALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALT 182
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
ACA G L G ++H+ K L+ +VA L LYA+C +D A S + D+ A
Sbjct: 183 ACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAA 242
Query: 246 WSALIGGYAQLGKACEAIDLFVKMF----SSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
W+ +I Y Q G+A EAI+ FV+M S P+E T++ V+ A AD+ G QLH
Sbjct: 243 WTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLH 302
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCE-LLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
+ + GF+ VAN+++ Y++ L + F E DVVSW+A+I+G+
Sbjct: 303 AQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLA 362
Query: 361 GEAIELLKDMLFEGHCP--NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+A L ++M CP N +T +++L++ + +++ G+Q H V G + + +I S
Sbjct: 363 EDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRS 422
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMY K G + DA VF H ++VSW M+VGYA+HG ++ALE++ M +KP
Sbjct: 423 ALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKP 482
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TFIGVL+AC H G VE G Y N M + +G+ P +H VV L G+ A E
Sbjct: 483 DHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEEL 542
Query: 539 I-KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
I K + E + VVW LL C + G+ AAE+ + +P AH+ ++N+YA
Sbjct: 543 IGKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYASKGQ 602
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQ-----NKMHYFSTSRFAQFQGIDLHEVMNQLS 652
W E A+ R +MK+K + K G W+ + ++ F S Q ++ ++ +
Sbjct: 603 WHEAAQERHMMKQKGVVK--GAGWSSITVGGEGRRVGVFVASDRTHPQDSAIYRMLELIY 660
Query: 653 VHLFDGGYVPDPI 665
YVPD +
Sbjct: 661 FGTGMARYVPDQL 673
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G + + + L+ MY K + DA +F + +V+SW+A+I G+++ G + AL
Sbjct: 410 VAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKAL 469
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLINM 120
F+ M L+P++ T++G ++AC G+ G M + GL C++++
Sbjct: 470 ELFQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDL 529
Query: 121 YGKCGLLSSAQFVFD--ASLERNSISWVSLLSSYCQCGEHVHGLK 163
G+ G ++ A+ + A+ ER+ + W SLL + GE G K
Sbjct: 530 LGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARGEEETGKK 574
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 197/639 (30%), Positives = 330/639 (51%), Gaps = 67/639 (10%)
Query: 92 ARSGKEIHGRMYRSGLELNSHVS-NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
+++G +H R + L + S N +++ Y K G + S FD +R+S+SW +++
Sbjct: 60 SKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIV 119
Query: 151 SYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF 210
Y G++ +++ K G+ ++F+ +VL + A ++ G ++HS + K L
Sbjct: 120 GYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRG 179
Query: 211 DKFVAMGLINLYAKCE-------------------------------KLDLASRVFSNIQ 239
+ V+ L+N+YAKC ++DLA F +
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM-PSEVTFSYVLGAFADVKETIGGR 298
D+ W+++I G+ Q G A+D+F KM L+ P T + VL A A++++ G+
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE-------------------- 338
Q+HS I+ GF V N ++ YS+C +E + + ++
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK 359
Query: 339 -------------MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
+ + DVV+W A+I G+ YGEAI L + M+ G PN YT + +
Sbjct: 360 LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKN 444
L+++S + ++ GKQ H VK G +V + +AL+ MYAK G + A + FD + ++
Sbjct: 420 LSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERD 479
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
VSW +M++ AQHG EALE++ M ++P+ T++GV SAC H GLV +G YF+
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD 539
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
M I P + H A +V LF G + A EFI+ PIEP+ V W LLS C+ HK++
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNI 599
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
LG+ AAE++L +PE++ A+ L+N+Y+ W+E AK+RK MK+ +KK+ G SW E+
Sbjct: 600 DLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEV 659
Query: 625 QNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++K+H F + +++ M ++ + GYVPD
Sbjct: 660 KHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPD 698
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 87/190 (45%), Gaps = 8/190 (4%)
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
HC ++K G +V + + L+++Y+K G ARK+FD + + SWNT+L Y++ G
Sbjct: 37 HCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDM 96
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
E + + + + ++ ++ +IG + M+++ GI P + +
Sbjct: 97 DSTCEFFDQLPQR----DSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE-GIEPTQFTLTN 151
Query: 522 VVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD 578
V+ A C ++ + FI + N V LL+ D ++ ++ ++++ D
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 579 PEDTSAHIML 588
+A I L
Sbjct: 212 ISSWNAMIAL 221
>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 800
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 209/640 (32%), Positives = 327/640 (51%), Gaps = 2/640 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G + + LL MY +++A+K+FD M R+++SWS++IS + G
Sbjct: 125 IIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEG 184
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FRL+V +E + T + AC G R K +HG + R +E +++ L+ M
Sbjct: 185 LEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLM 244
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +C SSA+ +F R+ SW +++S Y + L++F+ + VA + +
Sbjct: 245 YSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTI 304
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL +CA L+ G +H K D + LI YA+ KL +V I
Sbjct: 305 MAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGK 364
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+ LI YA G EA+ +FV+M G +P + S + A A+V G Q+
Sbjct: 365 RNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQI 424
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H IK FV N+++D YSKC ++ + FD + VV+WN++I G +
Sbjct: 425 HGYAIKRHILD-EFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNS 483
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EAI L M N T+ + S + +E GK H ++ G ++ I +AL
Sbjct: 484 LEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTAL 543
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMYAKCG L A +VFD +S +++VSW+ M+ G HG A+ +++ M + ++KPND
Sbjct: 544 IDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPND 603
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ +LSAC H G VEEG YFNSM ++ + P ++H A +V L + G AY I
Sbjct: 604 ITFMNILSACSHSGYVEEGKFYFNSM-KNFEVEPNLEHFACMVDLLSRAGDLDEAYRIIN 662
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
S P +W LL+GC+ H+ + + R +L +DT + +LSN+YAE WD
Sbjct: 663 SMPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMRTDDTGYYTLLSNIYAEEGNWDV 722
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQ 640
+ KVR MK LKK G S EL K++ F + +Q
Sbjct: 723 SRKVRSAMKGIGLKKVPGYSTIELDKKVYRFGAGDVSHWQ 762
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 146/564 (25%), Positives = 285/564 (50%), Gaps = 3/564 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G H + L+ Y + + ++ +F+ + W+ LI A
Sbjct: 24 LLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNFCGEA 83
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ + M+ + + + + + ACA G+ G+E+HGR+ + GL+++ V L+ M
Sbjct: 84 ISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLLGM 143
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YG G LS+A+ VFD R+ +SW S++S Y GE GL++F L V + +
Sbjct: 144 YGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTM 203
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+ GAC LG L++ +H + + +E + L+ +Y++C+ A R+FSN+
Sbjct: 204 LSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFN 263
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W+A+I Y + +A+ +FV+M + P+ VT VL + A G+ +
Sbjct: 264 RSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSV 323
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +K + ++++Y++ L K + + +++SWN LI+ + + +
Sbjct: 324 HCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLF 383
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ + M +G P+ ++ S+ ++ +++ + G Q H +K V S L
Sbjct: 384 KEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILDEFVQNS-L 442
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMY+KCG ++ A +FD + SK++V+WN+M+ G++Q G EA+ ++ M N + N+
Sbjct: 443 IDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNE 502
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ + AC H+G +E+G + +I +G+ + +++ ++A G R A+
Sbjct: 503 VTFLTAIQACSHMGHLEKGKWLHHKLIA-YGVKKDLFIDTALIDMYAKCGDLRIAHRVFD 561
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDL 564
S E + V W ++ GC H D+
Sbjct: 562 SMS-ERSVVSWSAMIGGCGMHGDI 584
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 224/466 (48%), Gaps = 15/466 (3%)
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ--- 154
+H + +GL + S LI Y + G L S++ VF+ +S W L+ +
Sbjct: 20 LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNF 79
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
CGE + + + + IS+F +SVL ACA GNL VG ++H + K L+ D V
Sbjct: 80 CGEAISLYNKMIYKQ---IPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVV 136
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
L+ +Y L A +VF N+ DL +WS++I Y G++ E +++F + S +
Sbjct: 137 ETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDV 196
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
VT + GA ++ + +H II+ + + + ++ YS+C+ + +
Sbjct: 197 ELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAER 256
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
F M + SW A+I+ + S + +A+++ +ML PN T +L+ +
Sbjct: 257 IFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNL 316
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
+ GK HC VK + +G AL++ YA+ G+L+ KV + +N++SWN ++
Sbjct: 317 LREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISV 376
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
YA GL +EAL I+ MQ P+ + +SAC ++GL+ G I+ H +
Sbjct: 377 YASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILDE 436
Query: 515 RMDHIASVVHLFACRGQTRRAY---EFIKSSPIEPNKVVWRCLLSG 557
+ + S++ +++ G AY + I+S + V W ++ G
Sbjct: 437 FVQN--SLIDMYSKCGHVDLAYLIFDRIQSKSV----VAWNSMICG 476
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 32/182 (17%), Positives = 76/182 (41%), Gaps = 8/182 (4%)
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H ++ G + + L++ Y++ G L ++ VF+ + + W ++ +
Sbjct: 21 HSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNFC 80
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
EA+ +Y+ M +I +D F VL AC G ++ G +I+ +G+ +DH+
Sbjct: 81 GEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIK-YGLD--VDHVVE 137
Query: 522 VVHL-----FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
L C ++ ++ + + + + C + ++ + L + R + +
Sbjct: 138 TSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVE 197
Query: 577 TD 578
D
Sbjct: 198 LD 199
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 194/629 (30%), Positives = 331/629 (52%), Gaps = 20/629 (3%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V + L+ MY + + DA +LFDEMPER+V++W+A+ISG G L+Y MV
Sbjct: 144 SVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMV 203
Query: 69 CCV----LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
PN T + AC G+ G +HG ++G+ V + L +MY KC
Sbjct: 204 RSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKC 263
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
A+ +F E++ +SW SL+ +YC+ G +++FL +SG+ E + +L
Sbjct: 264 DSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLL 323
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
++ G H+ + + + LI++YAKC+++D+A+ VF + D
Sbjct: 324 AGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTD 383
Query: 245 AWSALIGGYAQLGKACEAIDLFVKM---------FSSGLMPSEVTFSYVLGAFADVKETI 295
+WS+++ Y + G + ++L+ +M + + + S ++ LG
Sbjct: 384 SWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRL----- 438
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+ H IK + VAN ++ Y +C + + K F + DVV+W+ALI+ +
Sbjct: 439 -GQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYS 497
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
H +A+ L ML EG PN T ++++ +++ A+E G+ H + G + ++
Sbjct: 498 HLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLS 557
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
I +ALVDMY KCG+L ARK+FD + +++V+WN M+ GY HG +AL+++SMM+
Sbjct: 558 ICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGN 617
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+KPN TF+ +LSAC H GLV++G F M ++ + P + H A +V L G + A
Sbjct: 618 VKPNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEA 676
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
+ + + PIEP+ +W LL CK H + +G A+K ++DPE+ +I++SN Y A
Sbjct: 677 EDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSA 736
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
W+E K+R +MK ++K G S ++
Sbjct: 737 EKWNEIEKLRDMMKNHGVEKSIGWSTIDI 765
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 170/358 (47%), Gaps = 8/358 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ F +V+ N L+ MY K +++ A +F + +R+ SWS+++ + + G+
Sbjct: 342 IVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKC 401
Query: 61 LNYFRLMVCCVLEPNYYTY-----VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
L +R M + + + Y + +S+C+ G R G+ H + NS V+N
Sbjct: 402 LELYREMQ--FRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVAN 459
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
LI+MYG+CG A+ +F ++ ++W +L+SSY G L ++ GV
Sbjct: 460 ALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKP 519
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ + SV+ +CA L L+ G IHS V LE D + L+++Y KC +L +A ++F
Sbjct: 520 NSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMF 579
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
++ D+ W+ +I GY G+A +A+ LF M + P+ +TF +L A
Sbjct: 580 DSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVD 639
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIA 352
GR+L + + + ++D K L+E+ M E D W L+
Sbjct: 640 KGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLG 697
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 148/317 (46%), Gaps = 7/317 (2%)
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H+L L A L++ Y+ LA+ F+ PD W++L+ +
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF---SSFTFV 315
+ +M +SG PS T V A A++ G +H+ ++ G V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE-- 373
A++++ Y++C + ++++ FDEM E DVV+W A+I+G + + GE + L M+
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 374 --GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
G PN T + L + + G H VK G + S+L MY KC
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
DAR +F L K+LVSW +++ Y + G +A+E++ M+E+ ++P++ +L+
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327
Query: 492 HIGLVEEGWHYFNSMIR 508
+ V G + +++R
Sbjct: 328 NDAKVRGGKTFHAAIVR 344
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 155/374 (41%), Gaps = 62/374 (16%)
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH+L + G S A ++ YS L + F D WN+L+ +
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF---DSNVVI 416
+ + + M G P+ +T + + ++++ A+ G H V+ G D +V +
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM----Q 472
S+LV MYA+CG + DA ++FD + +++V+W ++ G +G E L M
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV-HLFA---- 527
+ +PN T L AC +G + G + + G+ + H SVV LF+
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVG-----TCLHGFGVKAGVGHCPSVVSSLFSMYTK 262
Query: 528 -----------------------------CR-GQTRRAYEF---IKSSPIEPNKVVWRCL 554
CR G +A E ++ S ++P++VV CL
Sbjct: 263 CDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCL 322
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN----VYAEANMWDETAKVRKIMKE 610
L+G + G+ I+ + D+ +++ N +YA+ D A V +++ +
Sbjct: 323 LAGLGNDAKVRGGKTFHAAIVRRNFGDS---VLIGNALISMYAKCKQVDIAATVFRMLHQ 379
Query: 611 KSLKKDTGCSWTEL 624
+DT SW+ +
Sbjct: 380 ----RDTD-SWSSM 388
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/576 (32%), Positives = 309/576 (53%), Gaps = 8/576 (1%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL-----ERNSISWVS 147
R EIH + ++ L L V+ N+ +L + S+ E +S ++
Sbjct: 38 RDLNEIHAHLIKTRLLLKPKVAE---NLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNI 94
Query: 148 LLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
++ + + +F ++ V EF+ +L C+ L L G QIH+L+ KC
Sbjct: 95 MIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCG 154
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
FV LI++YA C ++++A RVF + ++ W+++ GY + G E + LF
Sbjct: 155 FGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFH 214
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
+M + EVT VL A + + G ++ + + G + +++D Y+KC
Sbjct: 215 EMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCG 274
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
++ + + FD+MD DVV+W+A+I+G+ + EA++L +M PN T +IL+
Sbjct: 275 QVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILS 334
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ + A+E GK H I K V +G+AL+D YAKCG + + +VF + KN++S
Sbjct: 335 SCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLS 394
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
W ++ G A +G G++ALE + +M E ++PND TFIGVLSAC H GLV+EG F SM
Sbjct: 395 WTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMS 454
Query: 508 RDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLG 567
RD GI PR++H +V + G A++FIK+ PI+PN V+WR LL+ CK HK++ +G
Sbjct: 455 RDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIG 514
Query: 568 RYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNK 627
+ ++++ +P + +I+LSN+YA W++ KVR MKEK +KK GCS EL
Sbjct: 515 EESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGV 574
Query: 628 MHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+H F Q +++ + + + GYVP+
Sbjct: 575 IHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPN 610
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 224/443 (50%), Gaps = 5/443 (1%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A +F ++ E + +++ +I GF+ P A+ F+ M ++P+ +T+ + C+
Sbjct: 77 AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
G++IH + + G + V N LI+MY CG + A+ VFD ERN +W S+
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSM 196
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
+ Y + G +K+F + + E + SVL AC L +L++G I+ V + L
Sbjct: 197 FAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGL 256
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+ + + L+++YAKC ++D A R+F + D+ AWSA+I GY+Q + EA+DLF +
Sbjct: 257 KGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHE 316
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M + + P+E+T +L + A + G+ +H I K + ++DFY+KC
Sbjct: 317 MQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGS 376
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+E S++ F +M +V+SW LI G ++ +A+E ML + PN T+ +L+
Sbjct: 377 VESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSA 436
Query: 389 SSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLV 446
S ++ G+ + + G + + +VD+ + G + +A + ++ N V
Sbjct: 437 CSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAV 496
Query: 447 SWNTMLVGYAQHG---LGREALE 466
W T+L H +G E+L+
Sbjct: 497 IWRTLLASCKVHKNVEIGEESLK 519
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 207/443 (46%), Gaps = 38/443 (8%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N L+ MY + A+++FDEM ERNV +W+++ +G+++ G E + F
Sbjct: 154 GFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLF 213
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ + + T V ++AC D G+ I+ + GL+ N + L++MY KC
Sbjct: 214 HEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKC 273
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + +A+ +FD R+ ++W +++S Y Q L +F +K+ + +E + S+L
Sbjct: 274 GQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSIL 333
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+CAVLG L+ G +H + K ++ + L++ YAKC ++ + VF + + ++
Sbjct: 334 SSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVL 393
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH-SL 303
+W+ LI G A G+ +A++ F M + P++VTF VL A + GR L S+
Sbjct: 394 SWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSM 453
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGE 362
G ++D + L+EE+ + M + + V W L LASC +
Sbjct: 454 SRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTL----LASCKVHK 509
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
+E+ ++ L I++P + ++ L +
Sbjct: 510 NVEIGEESL-----------------------------KQLIILEPTHSGDYIL---LSN 537
Query: 423 MYAKCGRLNDARKVFDHLSSKNL 445
+YA GR DA KV + K +
Sbjct: 538 IYASVGRWEDALKVRGEMKEKGI 560
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 202/632 (31%), Positives = 326/632 (51%), Gaps = 25/632 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V + L+ MY + + DA K+F+EMPER+V++W+A+ISG + G L Y
Sbjct: 145 GDGDSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYL 204
Query: 65 RLMVCCV----LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
MV + PN T + AC + SG+ +HG + + G+ + V + L +M
Sbjct: 205 VEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSM 264
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC A +F E++ +SW SL+ YC+ G +++F +SG+ E
Sbjct: 265 YSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILV 324
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ VL GN+ G H+++ K + LI++Y K E +D A RVF +
Sbjct: 325 SCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQ 384
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD---------- 290
D +W+ ++ GY + G + ++L+ +M ++ Y AD
Sbjct: 385 RDADSWNLMVVGYCKAGCDVKCLELYREM--------QLRDKYEFWCVADSLVSAISSCS 436
Query: 291 -VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWN 348
+ E GR H IK + VAN ++ Y +C + + K F + DVV+WN
Sbjct: 437 RLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWN 496
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
LI+ + H A+ L ML EG PN T +++ +++ A+E G++ H + +
Sbjct: 497 TLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEM 556
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
G+D +V I +AL+DMYAKCG+L AR++FD + ++V+WN M+ GY HG ++ALE++
Sbjct: 557 GWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELF 616
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
M+ IKPN TF+ +LSA H GL+EEG F M + + + P + H A +V L
Sbjct: 617 GKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGK-YSLEPNLKHYACMVDLLGK 675
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIML 588
G + A + + + PIEP+ +W LLS CK H + +G A+K ++DPE+ +I++
Sbjct: 676 SGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHDNFEMGLRIAKKAFASDPENEGYYILI 735
Query: 589 SNVYAEANMWDETAKVRKIMKEKSLKKDTGCS 620
SN Y A WDE K+R+ MK ++K G S
Sbjct: 736 SNSYGGAKKWDEIEKLRETMKNLGVQKGVGWS 767
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 206/462 (44%), Gaps = 26/462 (5%)
Query: 97 EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
+H SGL ++ L++ Y G A F AS ++ W SL+ ++
Sbjct: 31 RVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCAS 90
Query: 157 EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL---EFDKF 213
+ V L SG S F+ A A LG L VG +H+ + L + D
Sbjct: 91 DFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSV 150
Query: 214 -VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF-- 270
VA L+ +YA+C + A +VF + D+ AW+A+I G + G++ E + V+M
Sbjct: 151 AVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRL 210
Query: 271 --SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
+ P+ T L A + E GR LH ++K+G V + + YSKC
Sbjct: 211 AGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYS 270
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
E++ F E+ E DVVSW +LI + EA+EL + M+ G P+ S +L+
Sbjct: 271 TEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSG 330
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ + GK H I K F +V+IG+AL+ MY K ++ A +VF L ++ SW
Sbjct: 331 LGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSW 390
Query: 449 NTMLVGYAQHGLGREALEIYSMMQ---ENKIKPNDNTFIGVLSACVHIG----------- 494
N M+VGY + G + LE+Y MQ + + ++ + +S+C +
Sbjct: 391 NLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCY 450
Query: 495 ----LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
L++E N +I +G + DH + L +G
Sbjct: 451 SIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDV 492
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 155/311 (49%), Gaps = 13/311 (4%)
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
+++H+L L +A L++ Y+ + LA+ FS PD W++LI +
Sbjct: 30 LRVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCA 89
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF----SSF 312
A+ +M +SG PS T A A++ G +H+ ++ G
Sbjct: 90 SDFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDS 149
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
VA++++ Y++C + +++K F+EM E DVV+W A+I+G + + GE + L +M+
Sbjct: 150 VAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVR 209
Query: 373 ---EGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+G PN T + L + + G+ H +VK G + ++ SAL MY+KC
Sbjct: 210 LAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCY 269
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
DA +F L K++VSW +++ Y + GL EA+E++ M E+ ++P++ +L
Sbjct: 270 STEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDE-----ILV 324
Query: 489 ACVHIGLVEEG 499
+CV GL G
Sbjct: 325 SCVLSGLGNNG 335
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 196/636 (30%), Positives = 339/636 (53%), Gaps = 5/636 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G ++ N +L Y+KF + A LFDEMP+R+ +SW+ +ISG++ G E A
Sbjct: 27 IKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAW 86
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + + Y++ + AS G+++HG + + G E N +V + L++MY
Sbjct: 87 CLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMY 146
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSC 180
KC + A F E NS+SW +L++ + Q + + L+ K+ V + +
Sbjct: 147 AKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTF 206
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ- 239
A +L + Q+H+ V K L+ + + +I+ YA C + A RVF +
Sbjct: 207 APLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG 266
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
DL +W+++I G+++ A +LF++M + T++ +L A + + I G+
Sbjct: 267 SKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSK--CELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
LH ++IK G T N ++ Y + +E++L F+ + D++SWN++I G
Sbjct: 327 LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQK 386
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+A++ + + Y +S +L SD+ ++ G+Q H K GF SN +
Sbjct: 387 GLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVI 446
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
S+L+ MY+KCG + ARK F +SSK + V+WN M++GYAQHGLG+ +L+++S M +
Sbjct: 447 SSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV 506
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
K + TF +L+AC H GL++EG N M + I PRM+H A+ V L G +A
Sbjct: 507 KLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAK 566
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
E I+S P+ P+ +V + L C+ ++ + A +L +PED ++ LS++Y++
Sbjct: 567 ELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLK 626
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
W+E A V+K+MKE+ +KK G SW E++N++ F+
Sbjct: 627 KWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFN 662
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 202/406 (49%), Gaps = 37/406 (9%)
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
H KC D +V+ +++ Y K L A+ +F + D +W+ +I GY GK
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
+A LF M SG +FS +L A VK G Q+H L+IK G+ +V +++
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP-N 378
+D Y+KCE +E++ + F E+ E + VSWNALIAG + A LL M + +
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T++ +L + D KQ H ++K G + I +A++ YA CG ++DA++VFD
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 439 HL-SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC------- 490
L SK+L+SWN+M+ G+++H L A E++ MQ + ++ + T+ G+LSAC
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322
Query: 491 ----VHIGLVEEGWHYF----NSMIRDHGISP---------------RMDHIA--SVVHL 525
+H ++++G N++I + P D I+ S++
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382
Query: 526 FACRGQTRRAYEF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
FA +G + A +F ++SS I+ + + LL C L LG+
Sbjct: 383 FAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 227/447 (50%), Gaps = 8/447 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ NV + L+ MY K R+ DA + F E+ E N +SW+ALI+GF Q+ + A
Sbjct: 127 VIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTA 186
Query: 61 LNYFRLM-VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
LM + + + T+ ++ K++H ++ + GL+ + N +I+
Sbjct: 187 FWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMIS 246
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
Y CG +S A+ VFD ++ ISW S+++ + + ++F+ ++ V +
Sbjct: 247 SYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIY 306
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK--CEKLDLASRVFS 236
+ +L AC+ + G +H +V K LE LI++Y + ++ A +F
Sbjct: 307 TYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFE 366
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+++ DL +W+++I G+AQ G + +A+ F + SS + + FS +L + +D+
Sbjct: 367 SLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQL 426
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHL 355
G+Q+H+L K GF S FV ++++ YSKC ++E + K F ++ +H V+WNA+I G+
Sbjct: 427 GQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYA 486
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+++L M + + T++ IL S I+ G + +++P +
Sbjct: 487 QHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL-LNLMEPVYKIQPR 545
Query: 416 IG--SALVDMYAKCGRLNDARKVFDHL 440
+ +A VD+ + G +N A+++ + +
Sbjct: 546 MEHYAAAVDLLGRAGLVNKAKELIESM 572
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 2/164 (1%)
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
THC +K G S++ + + ++D Y K G L A +FD + ++ VSWNTM+ GY G
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
+A +++ M+ + + +F +L + + G +I+ G + +
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKG-GYECNVYVGS 140
Query: 521 SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
S+V ++A + A+E K EPN V W L++G +D+
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAGFVQVRDI 183
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 287/540 (53%), Gaps = 21/540 (3%)
Query: 145 WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF--SCASVLGACAVLGNLKVGMQIHSL 202
W + + G + +FL R S S S + L +CA LG +G +H+L
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 203 VFKCALEFDKFVAMGLINLYAK--CEKLDLAS-----------------RVFSNIQLPDL 243
+ D+F A L+NLY K C LD +VF + D+
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+ L+ G A+ G+ EA+ KM G P T S VL FA+ + G ++H
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+ GF S FV ++++D Y+ C + S+K FD + D + WN+L+AG + EA
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEA 255
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ + + ML G P T+S+++ + ++ ++ +GKQ H ++ GF+ NV I S+L+DM
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDM 315
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y KCG ++ A +FD +SS ++VSW M++GYA HG REAL ++ M+ KPN TF
Sbjct: 316 YCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITF 375
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ VL+AC H GLV++GW YF SM +GI P ++H A++ G+ AY FI
Sbjct: 376 LAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQ 435
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
I+P VW LL C+ HK+ +L A+KI+ +P +H++LSN+Y+ + W+E A
Sbjct: 436 IKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAH 495
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+R+ M++K +KKD CSW E+++K+H F + + + +N S + G+VP+
Sbjct: 496 LRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPN 555
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 193/414 (46%), Gaps = 21/414 (5%)
Query: 81 GAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK--CGLL----------- 127
A+ +CA+ G + G +H RSG + +N L+N+Y K C L
Sbjct: 55 AALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVP 114
Query: 128 -SSAQF-----VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
SS F VFD +ER+ +SW +L+ + G H L + G F+ +
Sbjct: 115 GSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLS 174
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+VL A ++K G+++H F+ + D FV LI++YA C + D + +VF N+ +
Sbjct: 175 TVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR 234
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D W++L+ G AQ G EA+ +F +M +G+ P VTFS ++ ++ G+QLH
Sbjct: 235 DHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLH 294
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ +I GF F++++++D Y KC + + FD+M DVVSW A+I G+
Sbjct: 295 AYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAR 354
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSAL 420
EA+ L + M PN T+ +L S ++ G K G + +AL
Sbjct: 355 EALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAAL 414
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQE 473
D + G L++A + K S W+T+L H A E+ + E
Sbjct: 415 ADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME 468
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 190/428 (44%), Gaps = 55/428 (12%)
Query: 2 ITSGFHPNVITYNHLLLMYVKF-------------------SRINDAQKLFDEMPERNVI 42
I SG + T N LL +Y K + +K+FDEM ER+V+
Sbjct: 77 IRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVV 136
Query: 43 SWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM 102
SW+ L+ G ++ G AL + R M P+ +T + A D + G E+HG
Sbjct: 137 SWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFA 196
Query: 103 YRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGL 162
+R+G + + V + LI+MY C + VFD R+ I W SLL+ Q G L
Sbjct: 197 FRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEAL 256
Query: 163 KIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
IF ++GV + +S++ C L +L+ G Q+H+ V E + F++ LI++Y
Sbjct: 257 GIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMY 316
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
KC ++ +A +F + PD+ +W+A+I GYA G A EA+ LF +M P+ +TF
Sbjct: 317 CKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFL 376
Query: 283 YVLGA-----------------------------FADVKETIGGR----QLHSLIIKMGF 309
VL A FA + +T+G + ++ I KM
Sbjct: 377 AVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQI 436
Query: 310 SSFTFVANTVL---DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
V +T+L + L EE K E++ + S L + AS + EA L
Sbjct: 437 KPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHL 496
Query: 367 LKDMLFEG 374
+ M +G
Sbjct: 497 RESMRKKG 504
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF NV + L+ MY K I+ A +FD+M +V+SW+A+I G++ G A
Sbjct: 297 VICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREA 356
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F M +PN+ T++ ++AC+ G G + M G+ L +
Sbjct: 357 LVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALAD 416
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
G+ G L A F+ ++ + W +LL + C H K +L+ + I E
Sbjct: 417 TLGRAGELDEAYNFISKMQIKPTASVWSTLLRA---CRVH----KNTMLAEEVAKKIMEL 469
Query: 179 SCASVLGACAVLGNL 193
S+ G+ VL N+
Sbjct: 470 EPRSI-GSHVVLSNM 483
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/574 (31%), Positives = 321/574 (55%), Gaps = 4/574 (0%)
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
GD GK +H R+ + + + N LI+ Y KCG + A+ VFDA RN++S L+
Sbjct: 25 GDLSKGKALHARLI-TAAHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLM 83
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
S Y G H L++ R ++E+ ++ + A A + + +G Q H K
Sbjct: 84 SGYASSGRHKESLQLL---RVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFA 140
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
++V ++ +Y +C ++ AS+VF ++ D A++++I GY G+ ++ + M
Sbjct: 141 EQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNM 200
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
V++ VLG A +K+++ G Q+H+ +K +V + ++D Y KC+ +
Sbjct: 201 TGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHV 260
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
++ + F+ + E +VVSW A++ + + Y +A++L DM EG PN +TY+ LN
Sbjct: 261 HDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSC 320
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
+ + A+ G C++K G ++++ +AL++MY+K G + DA +VF + +++VSWN
Sbjct: 321 AGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWN 380
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
++ GYA HGL RE +E + M + P+ TF+GVLSAC +GLV+E ++Y N+M+++
Sbjct: 381 LIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKE 440
Query: 510 HGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRY 569
GI+P +H +V L G+ A FI ++ I + V WR LL+ C+ +K+ LG
Sbjct: 441 VGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHR 500
Query: 570 AAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMH 629
AE+IL +P D +++LSN+YA+AN WD KVRK M+E++++K G SW + + +H
Sbjct: 501 VAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVH 560
Query: 630 YFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
F++ Q + + + +L + GYVP+
Sbjct: 561 VFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPN 594
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 261/540 (48%), Gaps = 29/540 (5%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ + H +V+ +N+L+ Y K R+ A+ +FD MP RN +S + L+SG++ G + +L
Sbjct: 37 LITAAHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESL 96
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
R++ N Y AVSA A+ G++ HG ++G +V N ++ MY
Sbjct: 97 QLLRVV---DFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMY 153
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+C + A VF++ ++ ++ S+++ Y G+ L I S
Sbjct: 154 CQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYV 213
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+VLG CA + + +G Q+H+ K LE + +V L+++Y KC+ + A+R F +
Sbjct: 214 AVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEK 273
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ +W+A++ Y Q +A+ LF+ M G+ P+E T++ L + A + G L
Sbjct: 274 NVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALG 333
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ ++K G V+N +++ YSK +E++ + F M DVVSWN +I G+ H+G
Sbjct: 334 ACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGY---AHHG 390
Query: 362 ---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIG 417
E +E ML P+ T+ +L+ + + ++ ++K G
Sbjct: 391 LAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHY 450
Query: 418 SALVDMYAKCGRLNDA-RKVFDHLSSKNLVSWNTMLVG---YAQHGLGREALEIYSMMQE 473
+ +V + + GRL++A R + ++ ++V+W ++L Y +GLG E Q
Sbjct: 451 TCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAE-----QI 505
Query: 474 NKIKPNDNTFIGVLS-----ACVHIGLVEEGWHYFNSMIRDHGISPRMD--HIASVVHLF 526
+++P+D +LS A G+V+ H +R SP + H+ S VH+F
Sbjct: 506 LQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRK---SPGVSWIHVGSDVHVF 562
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 204/398 (51%), Gaps = 12/398 (3%)
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
++R G A+ + +VL A A G+L G +H+ + A FD + LI+ YAKC
Sbjct: 1 MARPCGAALQRHAAVAVLRAAAAAGDLSKGKALHARLITAA-HFDVVLHNNLISFYAKCG 59
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
++ LA VF + + + + L+ GYA G+ E++ L ++ G+ +E S +
Sbjct: 60 RVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQLL-RVVDFGM--NEYVLSAAVS 116
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
A A+V+ GRQ H +K GF+ +V N VL Y +C +E++ K F+ + D +
Sbjct: 117 ATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFA 176
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
+N++I G+L ++ ++++M E + +Y +L + + G Q H +
Sbjct: 177 FNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQAL 236
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
K + NV +GSALVDMY KC ++DA + F+ L KN+VSW ++ Y Q+ L +AL+
Sbjct: 237 KKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQ 296
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA---SVV 523
++ M+ ++PN+ T+ L++C + + G +++ + DH+ +++
Sbjct: 297 LFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMK----TGHWDHLLVSNALM 352
Query: 524 HLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++++ G A+ S P+ + V W +++G H
Sbjct: 353 NMYSKSGSIEDAHRVFISMPLR-DVVSWNLIITGYAHH 389
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G +++ N L+ MY K I DA ++F MP R+V+SW+ +I+G++ G+
Sbjct: 336 VMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREG 395
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG-KEIHGRMYRSGLELNSHVSNCLIN 119
+ F M+ + P+Y T+VG +SACA G ++ M G+ C++
Sbjct: 396 MEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVG 455
Query: 120 MYGKCGLLSSAQ-FVFDASLERNSISWVSLLSSYCQ 154
+ + G L A+ F+ + + + ++W SLL+S CQ
Sbjct: 456 LLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNS-CQ 490
>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 944
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 196/614 (31%), Positives = 321/614 (52%), Gaps = 3/614 (0%)
Query: 11 ITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC 70
+ N L+ MY K ++ AQ++FD M R+ +SW+ +++G+ + G L M
Sbjct: 234 VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRG 293
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
++ N V A+ A D GKEI+ + GL + V+ ++ MY KCG L A
Sbjct: 294 NVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKA 353
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
+ +F + R+ ++W + LS+ + G L IF + + G+ + + ++ C +
Sbjct: 354 RELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEI 413
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
N+ +G +H K +E D + L+++Y + E A +F+ +Q+ D+ W+ LI
Sbjct: 414 SNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLI 473
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
G+ + G A+++F ++ SG++P T + A A + + G LH I K GF
Sbjct: 474 NGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFE 533
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEH--DVVSWNALIAGHLASCHYGEAIELLK 368
S V ++D Y+KC L + F + +H D VSWN +IAG+L + + EAI +
Sbjct: 534 SDIHVKVALMDMYAKCGSLCSVERLF-LLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFR 592
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M E PNL T+ IL S + + H CI++ GF S +IG++L+DMYAKCG
Sbjct: 593 RMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCG 652
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+L + K F + +K+ +SWN ML YA HG G A+ ++S+MQE+ ++ + ++I VLS
Sbjct: 653 QLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLS 712
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H GL++EGW F SM H + P M+H A +V L C G + EP+
Sbjct: 713 ACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDA 772
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
VW LL+ CK H ++ LG A +L +P + H++LS++YA+ W++ + R +
Sbjct: 773 RVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQCGRWNDARRTRSHI 832
Query: 609 KEKSLKKDTGCSWT 622
LKK G SW
Sbjct: 833 NNHGLKKIPGYSWV 846
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/567 (28%), Positives = 282/567 (49%), Gaps = 15/567 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G +V L+ M+ K +++A+ +FD+MP ++ + W+A+ISG SQ P A
Sbjct: 125 IVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEA 184
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M E + + + A + GD K IHG + R + VSN LI+M
Sbjct: 185 LEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRS--ICGVVSNSLIDM 242
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + SAQ VFD R+ +SW ++++ Y + G + GL++ R+ V +++ +
Sbjct: 243 YCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAV 302
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ L A + +L+ G +I++ + L D VA ++ +YAKC +L A +F +++
Sbjct: 303 VNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEG 362
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL AWSA + + G E + +F M GL P + S ++ ++ G+ +
Sbjct: 363 RDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIM 422
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H IK S + T++ Y + EL ++ F+ M D+V WN LI G Y
Sbjct: 423 HCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTK---Y 479
Query: 361 GE---AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
G+ A+E+ + G P+ T + + + + ++ G H I K GF+S++ +
Sbjct: 480 GDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVK 539
Query: 418 SALVDMYAKCGRLNDARKVF---DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
AL+DMYAKCG L ++F H+ K+ VSWN M+ GY +G EA+ + M+
Sbjct: 540 VALMDMYAKCGSLCSVERLFLLTKHV--KDEVSWNVMIAGYLHNGYSNEAISTFRRMKLE 597
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
++PN TF+ +L A ++ ++ E + +IR +S + S++ ++A GQ R
Sbjct: 598 NVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIG-NSLIDMYAKCGQLRY 656
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ + + + W +LS H
Sbjct: 657 SEKCFHEME-NKDTISWNAMLSAYAMH 682
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 249/480 (51%), Gaps = 5/480 (1%)
Query: 14 NHLLLMYVKFSRINDAQKL---FDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC 70
NH L + IN ++ F ++ ++I +++ I +S+ A+N + ++
Sbjct: 34 NHYLKLINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKI 93
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
L+P+ +T+ + AC S D G I+ + +GLE + ++ LI+M+ K G L +A
Sbjct: 94 GLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNA 153
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
+ VFD ++ + W +++S Q L++F + G + + S ++ A + L
Sbjct: 154 RNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRL 213
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G++ IH V + ++ V+ LI++Y KC + A RVF + + D +W+ ++
Sbjct: 214 GDVGCCKSIHGYVVRRSI--CGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMM 271
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
GY + G E + L KM + ++V L A++++ G+++++ ++MG
Sbjct: 272 AGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLM 331
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S VA ++ Y+KC L+++ + F ++ D+V+W+A ++ + + + E + + + M
Sbjct: 332 SDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVM 391
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
+EG P+ S +++ ++I I GK HC +K +S++ + + LV MY +
Sbjct: 392 QYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELF 451
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
A +F+ + K++V WNT++ G+ ++G ALE+++ +Q + I P+ T +G+ SAC
Sbjct: 452 TYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSAC 511
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 199/464 (42%), Gaps = 54/464 (11%)
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F I+ P L +++ I Y++ +AI+L+ + GL P + TF++VL A +
Sbjct: 56 FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G ++ I+ G ++ +++D + K L+ + FD+M D V WNA+I+G
Sbjct: 116 HEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGL 175
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
S + EA+E+ M EG + + N+ S + + K H +V+
Sbjct: 176 SQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICG-- 233
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
V+ ++L+DMY KCG ++ A++VFD + ++ VSW TM+ GY ++G E L++ M+
Sbjct: 234 VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRG 293
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
+K N + L + +E+G +N ++ G+ + +V ++A G+ ++
Sbjct: 294 NVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQ-MGLMSDIVVATPIVCMYAKCGELKK 352
Query: 535 AYEFIKS----------------------------------SPIEPNKVVWRCLLSGCKT 560
A E S ++P+K + L+SGC
Sbjct: 353 ARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTE 412
Query: 561 HKDLVLGRYAAEKILSTDPE-DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGC 619
++ LG+ + D E D S L ++Y ++ + M+ K +
Sbjct: 413 ISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDI-----V 467
Query: 620 SWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
W L N + A E+ N+L + G +PD
Sbjct: 468 VWNTLINGFTKYGDPHLAL-------EMFNRLQL----SGILPD 500
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 3/183 (1%)
Query: 317 NTVLDFYSKCELLEESLKT---FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
N L + C+ + L+ F ++ ++ +N+ I + H+ +AI L +L
Sbjct: 34 NHYLKLINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKI 93
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G P+ +T++ +L + G + IV G + +V IG++L+DM+ K G L++A
Sbjct: 94 GLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNA 153
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
R VFD + K+ V WN M+ G +Q EALE++ MQ + + + + + A +
Sbjct: 154 RNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRL 213
Query: 494 GLV 496
G V
Sbjct: 214 GDV 216
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF + N L+ MY K ++ ++K F EM ++ ISW+A++S ++ G E+A
Sbjct: 629 IIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELA 688
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM-YRSGLELNSHVSNCLIN 119
+ F +M + + +Y+ +SAC G + G +I M + +E + C+++
Sbjct: 689 VALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVD 748
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
+ G GL + + + E ++ W +LL++
Sbjct: 749 LLGCAGLFDEVLSLLNKMTTEPDARVWGALLAA 781
>gi|449456490|ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 213/668 (31%), Positives = 351/668 (52%), Gaps = 45/668 (6%)
Query: 2 ITSGFHP---NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPE 58
+ G H N+I+ N + +V+ ++ AQ LF+EMP R+V+SW+ +ISG+S+ G
Sbjct: 26 LCEGLHTENSNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSVVSWNIMISGYSKFGKYS 85
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
ALN M C ++ N T+ +S CA G + GK+ H + +SGL++ V + L+
Sbjct: 86 EALNLASEMHCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALV 145
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG---------------------- 156
Y +S A+ VFD ++N + W LL Y +C
Sbjct: 146 YFYANINDISGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTT 205
Query: 157 --------EH--VHGLKIFLLSRKSG-VAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
EH GL++F R +G V +EF+ SV+ AC + L G +H ++ K
Sbjct: 206 MISAYARSEHNCKRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTK 265
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
FD V LI Y +CE +D A V+ +++ P L A ++L+ G G+ +A ++
Sbjct: 266 YGFHFDHSVCSALILFYCQCEAIDNAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEI 325
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F K+ + V+++ +L +A G ++L + SS NT++ YS+
Sbjct: 326 FCKLRE----KNPVSYNLMLKGYATSGRIEGSKRLFERMTHKTTSSL----NTMISVYSR 377
Query: 326 CELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
++++ K F+ + E D V+WN++I+G + + + A++L M + T+S
Sbjct: 378 NGEIDKAFKLFESVKSEGDPVTWNSMISGCIQNHQHEGALKLYITMCRTSVERSRSTFSA 437
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
+ + + I+ G+ H ++ FDSNV +G++L+DMYAKCG + DA+ F + N
Sbjct: 438 LFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCFPN 497
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
+ ++ ++ GY HGLG EA ++ M ++K+ PN T +G+LSAC G+V+EG F+
Sbjct: 498 VAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTVFH 557
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
SM + +G+ P ++H A VV L G+ A FI+ PIE ++V+W LL+ C DL
Sbjct: 558 SMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEAFIRCMPIEADRVIWGALLNACWFWMDL 617
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
LG A+K+LS DP+ SA+I+LSN+YA+ W E VR+ + +KK GCSW ++
Sbjct: 618 ELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRQLMSLKVKKIRGCSWIDV 677
Query: 625 QNKMHYFS 632
NK FS
Sbjct: 678 NNKTCVFS 685
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 192/651 (29%), Positives = 332/651 (50%), Gaps = 31/651 (4%)
Query: 44 WSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY 103
++ LI G++ G+ + A+ + M+ + P+ YT+ +SAC+ G ++HG +
Sbjct: 98 YNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVL 157
Query: 104 RSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLK 163
+ GLE + VSN LI+ Y +CG + + +FD LERN +SW SL++ Y +
Sbjct: 158 KMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVS 217
Query: 164 IFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYA 223
+F ++GV + + V+ ACA L +L++G ++ S + + +E + L+++Y
Sbjct: 218 LFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYM 277
Query: 224 KCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSY 283
KC + A ++F +L ++ ++ Y A + + + +M G P +VT
Sbjct: 278 KCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLS 337
Query: 284 VLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF------- 336
+ A A + + G+ H+ +++ G + ++N ++D Y KC E + K F
Sbjct: 338 TIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKT 397
Query: 337 ------------------------DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
DEM E D+VSWN +I + + EAIEL ++M
Sbjct: 398 VVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQN 457
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+G + T I + + A++ K I K ++ +G+ALVDM+++CG +
Sbjct: 458 QGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSS 517
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A VF + +++ +W + A G A+E+++ M E K+KP+D F+ +L+AC H
Sbjct: 518 AMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSH 577
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
G V++G F SM + HGI P + H +V L G A + I+S PIEPN VVW
Sbjct: 578 GGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWG 637
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL+ C+ HK++ L YAAEK+ PE H++LSN+YA A W + A+VR MKEK
Sbjct: 638 SLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKG 697
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++K G S E+Q +H F++ + + + ++ +++ L + GYVPD
Sbjct: 698 VQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPD 748
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 227/487 (46%), Gaps = 33/487 (6%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G ++ N L+ Y + +++ +KLFD M ERNV+SW++LI+G+S + + A++ F
Sbjct: 160 GLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLF 219
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M +EPN T V +SACA D GK++ + G+EL++ + N L++MY KC
Sbjct: 220 FQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKC 279
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + +A+ +FD +N + + +++S+Y L I + G + + S +
Sbjct: 280 GDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTI 339
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK----------------- 227
ACA LG+L VG H+ V + LE ++ +I++Y KC K
Sbjct: 340 AACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVV 399
Query: 228 --------------LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
++LA R+F + DL +W+ +IG Q+ EAI+LF +M + G
Sbjct: 400 TWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQG 459
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ VT + A + + + + I K + ++D +S+C ++
Sbjct: 460 IPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAM 519
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
F M++ DV +W A I + AIEL +ML + P+ + +L S
Sbjct: 520 HVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGG 579
Query: 394 AIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTM 451
+++ G+Q + K G ++V +VD+ + G L +A + + N V W ++
Sbjct: 580 SVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSL 639
Query: 452 LVGYAQH 458
L +H
Sbjct: 640 LAACRKH 646
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 220/458 (48%), Gaps = 19/458 (4%)
Query: 168 SRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS-------LVFKCALEFDKFVAMGLIN 220
S K I+ S + +L C L LK Q+H L K A +K +A +
Sbjct: 16 SLKEANPITRNSSSKLLVNCKTLKELK---QLHCDMMKKGLLCHKPASNLNKLIASSV-- 70
Query: 221 LYAKCEKLDLASRVFSNI--QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE 278
E LD A F + + L ++ LI GYA G +AI L+V+M G++P +
Sbjct: 71 QIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDK 130
Query: 279 VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE 338
TF ++L A + + G Q+H ++KMG FV+N+++ FY++C ++ K FD
Sbjct: 131 YTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDG 190
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
M E +VVSW +LI G+ EA+ L M G PN T +++ + + +E G
Sbjct: 191 MLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELG 250
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
K+ I + G + + ++ +ALVDMY KCG + AR++FD ++KNLV +NT++ Y H
Sbjct: 251 KKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHH 310
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
+ L I M + +P+ T + ++AC +G + G ++R+ G+ +
Sbjct: 311 EWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRN-GLEGWDNI 369
Query: 519 IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD 578
+++ ++ G+ A + + P V W L++G D+ L +++L D
Sbjct: 370 SNAIIDMYMKCGKREAACKVFEHMP-NKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERD 428
Query: 579 PEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
+ I + +M++E ++ + M+ + + D
Sbjct: 429 LVSWNTMI---GALVQVSMFEEAIELFREMQNQGIPGD 463
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 197/656 (30%), Positives = 343/656 (52%), Gaps = 12/656 (1%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVL--- 72
L ++Y +++ + A KLF+E P + V W+AL+ + G L+ F M +
Sbjct: 42 LNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEE 101
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P+ YT A+ +C+ GK IHG + + ++ + V + LI +Y KCG ++ A
Sbjct: 102 RPDNYTVSIALKSCSGLQKLELGKMIHGFL-KKKIDSDMFVGSALIELYSKCGQMNDAVK 160
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIF----LLSRKSGVAISEFSCASVLGACA 188
VF + + + W S+++ Y Q G L F +L + S ++ S AS ACA
Sbjct: 161 VFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAAS---ACA 217
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L + +G +H V + + +A ++NLY K + +A+ +F + D+ +WS+
Sbjct: 218 QLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSS 277
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
++ YA G A++LF +M + + VT L A A G+Q+H L + G
Sbjct: 278 MVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYG 337
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F V+ ++D Y KC E +++ F+ M + DVVSW L +G+ +++ +
Sbjct: 338 FELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFC 397
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+ML G P+ IL SS++ ++ H + K GFD+N IG++L+++YAKC
Sbjct: 398 NMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCS 457
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI-YSMMQENKIKPNDNTFIGVL 487
+++A KVF L ++V+W++++ Y HG G EAL++ + M + +KPND TF+ +L
Sbjct: 458 SIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSIL 517
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC H GL+EEG F+ M+ ++ + P ++H +V L G+ +A + I + P++
Sbjct: 518 SACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAG 577
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
VW LL C+ H+++ +G AA + DP + +LSN+Y W + AK+R +
Sbjct: 578 PHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTL 637
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+KE LKK G S E++N++H F S + ++E++ +L + + GY PD
Sbjct: 638 IKENRLKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYEMLRKLDARMREEGYDPD 693
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 151/284 (53%), Gaps = 1/284 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N +L +Y K I A LF EMP +++ISWS++++ ++ G ALN F
Sbjct: 236 GFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLF 295
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ +E N T + A+ ACAS + GK+IH G EL+ VS L++MY KC
Sbjct: 296 NEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKC 355
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+A +F+ +++ +SW L S Y + G L +F +G + +L
Sbjct: 356 FSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKIL 415
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A + LG ++ + +H+ V K + ++F+ LI LYAKC +D A++VF ++ D+
Sbjct: 416 AASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVV 475
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGA 287
WS++I Y G+ EA+ L +M + S + P++VTF +L A
Sbjct: 476 TWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSA 519
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 172/364 (47%), Gaps = 7/364 (1%)
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+HS K L D FV L LYA+ L A ++F + W+AL+ Y G
Sbjct: 22 QLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81
Query: 258 KACEAIDLFVKMFSSGLM---PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
K E + LF +M + + P T S L + + +++ G+ +H +K S F
Sbjct: 82 KWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGF-LKKKIDSDMF 140
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM-LFE 373
V + +++ YSKC + +++K F E + DVV W ++I G+ + A+ M + E
Sbjct: 141 VGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLE 200
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
P+ T + + + + G+ H + + GFD+ + + ++++++Y K G + A
Sbjct: 201 QVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIA 260
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+F + K+++SW++M+ YA +G AL +++ M + +I+ N T I L AC
Sbjct: 261 ANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASS 320
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
+EEG + + ++G + +++ ++ A E P + + V W
Sbjct: 321 SNLEEG-KQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMP-KKDVVSWAV 378
Query: 554 LLSG 557
L SG
Sbjct: 379 LFSG 382
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 130/254 (51%), Gaps = 3/254 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF ++ L+ MY+K +A +LF+ MP+++V+SW+ L SG+++IGM +L
Sbjct: 334 VNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSL 393
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M+ P+ V ++A + G + +H + +SG + N + LI +Y
Sbjct: 394 GVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELY 453
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKI-FLLSRKSGVAISEFSC 180
KC + +A VF + ++W S++++Y G+ LK+ +S S V ++ +
Sbjct: 454 AKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTF 513
Query: 181 ASVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L AC+ G ++ G+++ H +V + L + +++L + +LD A + +N+
Sbjct: 514 VSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMP 573
Query: 240 L-PDLTAWSALIGG 252
+ W AL+G
Sbjct: 574 MQAGPHVWGALLGA 587
>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
Length = 829
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 206/682 (30%), Positives = 349/682 (51%), Gaps = 20/682 (2%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
SG +V+ +L MY + ++ A++ FD M RNV+SWSA+I+ ++Q G P AL
Sbjct: 70 ASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDALE 129
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV-SNCLINMY 121
F M ++ N T+V + ACAS GK IH R+ GL + + N ++NMY
Sbjct: 130 LFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMY 189
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK---SGVAISEF 178
GKCG + A+ VF+ +N+++W +++++ C H + F L + G+ ++
Sbjct: 190 GKCGEVDLAREVFERMEAKNAVTWNTMIAA---CSRHDRYKEAFALLGEMDLDGLRPNKI 246
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ SV+ ACA + ++ G +H +V LE D VA L+NLY KC KL A I
Sbjct: 247 TLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGI 306
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ D +W+ L+ YA+ G AI + +M G+ TF +L + + G
Sbjct: 307 ETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGE 366
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLAS 357
++H + + G + ++D Y KC + + + FD M D DV WNAL+A ++
Sbjct: 367 EIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLR 426
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG-FDSNVV- 415
E + + M +G P+ T+ +IL+ + + A+ G+ TH +++ G FD V
Sbjct: 427 DQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVA 486
Query: 416 ----IGSALVDMYAKCGRLNDARKVF---DHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
+ +++++MYAKCG L DA+ F + ++V+W+ M+ Y+Q GL EAL +
Sbjct: 487 SADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCF 546
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
MQ+ +KP+ +F+ ++ C H GLV E +F S+ DHGI+P H A +V L +
Sbjct: 547 YSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSR 606
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIML 588
G R A ++ +P+ + W LLS C+T+ DL R A ++ S SA+ +L
Sbjct: 607 AGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLERARRVAARLASL--RSGSAYSLL 664
Query: 589 SNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMH-YFSTSRFAQFQGIDLHEV 647
++V+ + WD+ R+ + E+ GCSW E+ N+++ +F+ + ++
Sbjct: 665 ASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAE 724
Query: 648 MNQLSVHLFDGGYVPDPIYSSH 669
+ +L V + GY DPI H
Sbjct: 725 LERLCVEIRKAGYERDPIKKVH 746
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 153/533 (28%), Positives = 269/533 (50%), Gaps = 12/533 (2%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG 95
M +R+ SW+ I+ +++ G AL FR M + P+ + + + A AS GD G
Sbjct: 1 MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60
Query: 96 KEIHGRMYR-SGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
+ H + SGL + V+ ++ MY +CG +S A+ FDA + RN +SW +++++Y Q
Sbjct: 61 EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS-LVFKCALEFDKF 213
G L++F+ GV + + SVL ACA + + +G IH +V L D
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVI 180
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
+ ++N+Y KC ++DLA VF ++ + W+ +I ++ + EA L +M G
Sbjct: 181 LGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDG 240
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
L P+++T V+ A A ++ + GR +H ++ G S VAN +++ Y KC L +
Sbjct: 241 LRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAAR 300
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
+ ++ D +SW L+A + H AI ++K M EG + +T+ N+L I
Sbjct: 301 HALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIA 360
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS-KNLVSWNTML 452
A+ G++ H + + G + + V+ +ALVDMY KCG + AR+ FD +S +++ WN +L
Sbjct: 361 ALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALL 420
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
Y G+E L I++ M + P+ TF+ +L AC + + G + M+ + G+
Sbjct: 421 AAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRML-ERGL 479
Query: 513 SPRMD------HIASVVHLFA-CRGQTRRAYEFIKSSPIEPNKVV-WRCLLSG 557
R SV++++A C EF K+ + VV W +++
Sbjct: 480 FDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAA 532
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 206/667 (30%), Positives = 343/667 (51%), Gaps = 12/667 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S NV L+ +Y + A+ FD + R+V +W+ +ISG+ + G
Sbjct: 77 LVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEV 136
Query: 61 LNYFRL-MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ F L M+ L P+Y T+ + AC + D G +IH + G + +V+ LI+
Sbjct: 137 IRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIH 193
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV-AISEF 178
+Y + + +A+ +FD R+ SW +++S YCQ G L + +G+ A+
Sbjct: 194 LYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSV 248
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S+L AC G+ G+ IHS K LE + FV+ LI+LYA+ +L +VF +
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ DL +W+++I Y + AI LF +M S + P +T + + + + R
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 299 QLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+ ++ G F + N V+ Y+K L++ + F+ + DV+SWN +I+G+ +
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 358 CHYGEAIELLKDMLFEGH-CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
EAIE+ M EG N T+ ++L S A+ G + H ++K G +V +
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
++L DMY KCGRL DA +F + N V WNT++ + HG G +A+ ++ M + +
Sbjct: 489 VTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 548
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+ TF+ +LSAC H GLV+EG F M D+GI+P + H +V ++ GQ A
Sbjct: 549 KPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETAL 608
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+FIKS ++P+ +W LLS C+ H ++ LG+ A+E + +PE H++LSN+YA A
Sbjct: 609 KFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAG 668
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W+ ++R I K L+K G S E+ NK+ F T +++ + L L
Sbjct: 669 KWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Query: 657 DGGYVPD 663
GYVPD
Sbjct: 729 MIGYVPD 735
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 245/470 (52%), Gaps = 18/470 (3%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
+S K +H R+ S N +S L+N+Y G ++ A+ FD R+ +W ++S Y
Sbjct: 68 QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGY 127
Query: 153 CQCG---EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ G E + +F+LS SG+ + SVL AC + + G +IH L K
Sbjct: 128 GRAGNSSEVIRCFSLFMLS--SGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFM 182
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
+D +VA LI+LY++ + + A +F + + D+ +W+A+I GY Q G A EA+ L
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL---- 238
Query: 270 FSSGLMPSE-VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
S+GL + VT +L A + + G +HS IK G S FV+N ++D Y++
Sbjct: 239 -SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGR 297
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
L + K FD M D++SWN++I + + AI L ++M P+ T ++ +I
Sbjct: 298 LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASI 357
Query: 389 SSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
S + I + ++ G F ++ IG+A+V MYAK G ++ AR VF+ L + +++S
Sbjct: 358 LSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS 417
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQEN-KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
WNT++ GYAQ+G EA+E+Y++M+E +I N T++ VL AC G + +G +
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+++ G+ + + S+ ++ G+ A P N V W L++
Sbjct: 478 LKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIA 525
>gi|356519676|ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 728
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 221/699 (31%), Positives = 356/699 (50%), Gaps = 46/699 (6%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
NVI+ N + K ++ +A+ LFD+MP R V SW+ +ISG+S +G AL M
Sbjct: 40 NVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTLVSFMH 99
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ N ++ +SACA G GK++H + +SG E V + L+ C +
Sbjct: 100 RSCVALNEVSFSAVLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVHCCGIR 159
Query: 129 SAQFVFDASLE-------------------------------RNSISWVSLLSSYCQCGE 157
A+ VF+ + R+ ++W +L+S Y + +
Sbjct: 160 EAEVVFEELRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDVVAWTTLISGYAKRED 219
Query: 158 HV-HGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
L +F + R S V +EF+ V+ CA LG L+ G +H L K L+FD +
Sbjct: 220 GCERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDFDNSIG 279
Query: 216 MGLINLYAKCEKLDLASRVFSNIQ-LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
+ Y CE +D A RV+ ++ L ++LIGG G+ EA +F ++ +
Sbjct: 280 GAVTEFYCGCEAIDDAKRVYESMGGQASLNVANSLIGGLVSKGRIEEAELVFYELRET-- 337
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+ V+++ ++ +A + ++L KM + T + NT++ YSK L+E++K
Sbjct: 338 --NPVSYNLMIKGYAMSGQFEKSKRLFE---KMSPENLTSL-NTMISVYSKNGELDEAVK 391
Query: 335 TFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
FD+ E + VSWN++++G++ + Y EA+ L M + T+S + S +
Sbjct: 392 LFDKTKGERNYVSWNSMMSGYIINGKYKEALNLYVAMRRLSVDYSRSTFSVLFRACSCLC 451
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+ G+ H ++K F NV +G+ALVD Y+KCG L +A++ F + S N+ +W ++
Sbjct: 452 SFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHLAEAQRSFISIFSPNVAAWTALIN 511
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
GYA HGLG EA+ ++ M I PN TF+GVLSAC H GLV EG F+SM R +G++
Sbjct: 512 GYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGLRIFHSMQRCYGVT 571
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEK 573
P ++H VV L G + A EFI PIE + ++W LL+ KD+ +G AAEK
Sbjct: 572 PTIEHYTCVVDLLGRSGHLKEAEEFIIKMPIEADGIIWGALLNASWFWKDMEVGERAAEK 631
Query: 574 ILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
+ S DP A ++LSN+YA W + K+RK ++ L+KD GCSW EL NK+H FS
Sbjct: 632 LFSLDPNPIFAFVVLSNMYAILGRWGQKTKLRKRLQSLELRKDPGCSWIELNNKIHLFSV 691
Query: 634 SRFAQFQGIDLHEVMNQLSVHLFDGGYVP-DPIYSSHFE 671
++ + ++ + +P + +YSSH E
Sbjct: 692 EDKTHLYSDVIYATVEHITATI--NSIIPSNYLYSSHGE 728
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 209/476 (43%), Gaps = 54/476 (11%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQI------ 54
++ SG+ + + LL V I +A+ +F+E+ + N + WS +++G+ +
Sbjct: 133 LLKSGYERFGLVGSALLYFCVHCCGIREAEVVFEELRDGNQVLWSLMLAGYVKQDMMDDA 192
Query: 55 -----GMP---------------------EVALNYFRLM-VCCVLEPNYYTYVGAVSACA 87
MP E AL+ F M + PN +T V CA
Sbjct: 193 MDMFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCA 252
Query: 88 SRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV- 146
G R+GK +HG + GL+ ++ + + Y C + A+ V+++ + S++
Sbjct: 253 RLGVLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEAIDDAKRVYESMGGQASLNVAN 312
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
SL+ G +F R++ + S ++ A+ G + ++
Sbjct: 313 SLIGGLVSKGRIEEAELVFYELRET----NPVSYNLMIKGYAMSGQFEKSKRLFE----- 363
Query: 207 ALEFDKFVAMG-LINLYAKCEKLDLASRVFSNIQ-LPDLTAWSALIGGYAQLGKACEAID 264
+ + ++ +I++Y+K +LD A ++F + + +W++++ GY GK EA++
Sbjct: 364 KMSPENLTSLNTMISVYSKNGELDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKEALN 423
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
L+V M + S TFS + A + + G+ LH+ +IK F +V ++DFYS
Sbjct: 424 LYVAMRRLSVDYSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYS 483
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
KC L E+ ++F + +V +W ALI G+ EAI L + ML +G PN T+
Sbjct: 484 KCGHLAEAQRSFISIFSPNVAAWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVG 543
Query: 385 ILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
+L+ + + G C V P + + VD+ + G L +A +
Sbjct: 544 VLSACNHAGLVCEGLRIFHSMQRCYGVTPTIEHYTCV----VDLLGRSGHLKEAEE 595
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + F NV L+ Y K + +AQ+ F + NV +W+ALI+G++ G+ A
Sbjct: 463 LIKTPFQVNVYVGTALVDFYSKCGHLAEAQRSFISIFSPNVAAWTALINGYAYHGLGSEA 522
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
+ FR M+ + PN T+VG +SAC G G I M R G+ C+++
Sbjct: 523 ILLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGLRIFHSMQRCYGVTPTIEHYTCVVD 582
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ G+ G L A +F+ +E + I W +LL++
Sbjct: 583 LLGRSGHLKEAEEFIIKMPIEADGIIWGALLNA 615
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
TH +P NV+ + + K G+L +AR +FD + ++ + SWNTM+ GY+ G
Sbjct: 29 THLQTTEPHV-GNVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGR 87
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
EAL + S M + + N+ +F VLSAC G G +S++ G R +
Sbjct: 88 YPEALTLVSFMHRSCVALNEVSFSAVLSACARSGSFLLG-KQVHSLLLKSGYE-RFGLVG 145
Query: 521 SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
S + F R E + + N+V+W +L+G
Sbjct: 146 SALLYFCVHCCGIREAEVVFEELRDGNQVLWSLMLAG 182
>gi|302796685|ref|XP_002980104.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
gi|300152331|gb|EFJ18974.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
Length = 623
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 190/593 (32%), Positives = 313/593 (52%), Gaps = 3/593 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI++G + N L+ MY + ++DA+ F + +RNV SW+ LIS Q G
Sbjct: 28 MISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIHQRNVFSWTILISLLVQNGEASEG 87
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L + M E N T++ + AC+ GD GK+IH R+ GLE + N L+NM
Sbjct: 88 LELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKIHERVRAKGLETDIITGNALLNM 147
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y C L A+ VF+ + R+ +SW ++S+Y G + L+++ + +
Sbjct: 148 YTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTL 207
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL ACA L L G IH + +E D FV +++ Y KCE +D A +VF I
Sbjct: 208 ISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVDDARQVFDRIMD 267
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+A+IG YAQ +A L+++M + + P++VT +L + + + G L
Sbjct: 268 KDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCSSTCKMERGSSL 327
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH--DVVSWNALIAGHLASC 358
H G+ S T V N +++ Y+KC LE + + F E +V++WN +I +
Sbjct: 328 HREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTTNVITWNTMIVANAQED 387
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA+++ M EG + TY +L + ++ G++ H + G S+VV S
Sbjct: 388 LNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTGREVHSRSLATGCCSDVVQNS 447
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+ +Y CG L A+ F+ ++SKN+VSW++++ YA++G A ++ M ++ + P
Sbjct: 448 -LICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLP 506
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N TF VL AC H GL +EGW YF SM DH + P +H +V+L A G+ ++A F
Sbjct: 507 NIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASF 566
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
+ + P++P+ WR LL C+ H D G AA+++L +P +++A+++L N+
Sbjct: 567 MSAMPVQPDASAWRSLLGACEVHTDKEYGALAAKQLLDAEPRNSAAYVLLYNI 619
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 222/410 (54%), Gaps = 5/410 (1%)
Query: 90 GDARS---GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV 146
G+++S G+ +H +M +GL+ ++++ N L+ MYG+CG L A+ F +RN SW
Sbjct: 13 GNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIHQRNVFSWT 72
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
L+S Q GE GL++ G ++ + S+LGAC+V G+L +G +IH V
Sbjct: 73 ILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKIHERVRAK 132
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
LE D L+N+Y C+ LD A VF + D+ +W+ +I YA G EA+ L+
Sbjct: 133 GLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLY 192
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
+M P VT VL A A ++ + G+ +H I+ G + FV V+ FY KC
Sbjct: 193 RRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKC 252
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
E ++++ + FD + + D+V WNA+I + + +A L +M+ PN T +L
Sbjct: 253 EAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLL 312
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK--N 444
+ S +E G H G+ S+ + +AL++MYAKCG L +A +VF +++ N
Sbjct: 313 DSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTTN 372
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+++WNTM+V AQ L EAL+IY M + IK +D T+ VL+ C + G
Sbjct: 373 VITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFG 422
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 193/368 (52%), Gaps = 8/368 (2%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+L G ++HS + L+ D ++ L+ +Y +C LD A F I ++ +W+ LI
Sbjct: 17 SLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIHQRNVFSWTILIS 76
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
Q G+A E ++L M G +++TF +LGA + + G+++H + G +
Sbjct: 77 LLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKIHERVRAKGLET 136
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
N +L+ Y+ C+ L+E+ F+ M DVVSW +I+ + + + EA++L + M
Sbjct: 137 DIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRME 196
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
E P+ T ++L + + + GK H IV G +++V +G+A+V Y KC ++
Sbjct: 197 QEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVD 256
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
DAR+VFD + K++V WN M+ YAQ+ +A +Y M EN+++PND T I +L +C
Sbjct: 257 DARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCS 316
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDH---IASVVHLFACRGQTRRAYE-FIKSSPIEPN 547
+E G +S+ R+ + H + ++++++A G A FI+++ N
Sbjct: 317 STCKMERG----SSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTTN 372
Query: 548 KVVWRCLL 555
+ W ++
Sbjct: 373 VITWNTMI 380
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 120/220 (54%)
Query: 280 TFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
T+ +L + + K GR++HS +I G T++ N ++ Y +C L+++ F +
Sbjct: 4 TYEALLKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGI 63
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
+ +V SW LI+ + + E +ELLK M EG N T+ ++L S + GK
Sbjct: 64 HQRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGK 123
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
+ H + G +++++ G+AL++MY C L++AR VF+ + +++VSW ++ YA G
Sbjct: 124 KIHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAG 183
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
EAL++Y M++ +P+ T I VL AC + + EG
Sbjct: 184 YPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVEG 223
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 201/655 (30%), Positives = 337/655 (51%), Gaps = 60/655 (9%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
+++T + AC R G HG + +G E N + N L+ MY +CG L A +F
Sbjct: 9 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 68
Query: 135 DASLER---NSISWVSLLSSYCQCGEHVHGLKIF-----LLSRKSGVAISEF-SCASVLG 185
D +R + ISW S++S++ + L +F ++ K S+ S ++L
Sbjct: 69 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 128
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
AC L + ++H + D FV LI+ YAKC ++ A +VF+ ++ D+ +
Sbjct: 129 ACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 188
Query: 246 WSALIGGYAQLG---------------------------------KAC--EAIDLFVKMF 270
W+A++ GY+Q G + C EA+++F +M
Sbjct: 189 WNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMI 248
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM----------GFSSFTFVANTVL 320
SG +P+ VT VL A A + G ++H+ +K G V N ++
Sbjct: 249 FSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 308
Query: 321 DFYSKCELLEESLKTFDE--MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE--GHC 376
D YSKC + + FD+ ++E +VV+W +I GH +A++L +M+ E G
Sbjct: 309 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 368
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNV-VIGSALVDMYAKCGRLNDAR 434
PN YT S IL + + AI GKQ H +++ +DS+ + + L++MY+KCG ++ AR
Sbjct: 369 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTAR 428
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
VFD +S K+ +SW +M+ GY HG G EAL+I+ M++ P+D TF+ VL AC H G
Sbjct: 429 HVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCG 488
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
+V++G YF+SM D+G++PR +H A + L A G+ +A++ +K P+EP VVW L
Sbjct: 489 MVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVAL 548
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
LS C+ H ++ L +A K++ + E+ ++ ++SN+YA A W + A++R +MK+ +K
Sbjct: 549 LSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIK 608
Query: 615 KDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
K GCSW + Q F + ++ ++ L + GYVP+ ++ H
Sbjct: 609 KRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALH 663
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 154/540 (28%), Positives = 246/540 (45%), Gaps = 92/540 (17%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER---NVISWSALISGFSQIGMPEVA 60
+GF NV N L+ MY + + +A +FDE+ +R +VISW++++S + A
Sbjct: 39 NGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTA 98
Query: 61 LNYFRLMVCCVLEP------NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
L+ F M V E + + V + AC S KE+HG R+G L+ V
Sbjct: 99 LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVG 158
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N LI+ Y KCGL+ +A VF+ ++ +SW ++++ Y Q G ++F RK +
Sbjct: 159 NALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIP 218
Query: 175 I------------SEFSCA-----------------------SVLGACAVLGNLKVGMQI 199
+ S+ C+ SVL ACA LG GM+I
Sbjct: 219 LDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEI 278
Query: 200 HSLVFK-CALEFDK---------FVAMGLINLYAKCEKLDLASRVFSNIQLPD--LTAWS 247
H+ K C L D V LI++Y+KC A +F +I L + + W+
Sbjct: 279 HAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWT 338
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSS--GLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
+IGG+AQ G + +A+ LFV+M S G+ P+ T S +L A A + G+Q+H+ ++
Sbjct: 339 VMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVL 398
Query: 306 K--MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+ SS FVAN +++ YSKC ++ + FD M + +SW +++ G+ EA
Sbjct: 399 RHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEA 458
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG---FDS-NVVIG-- 417
+++ M G P+ T+ +L S HC +V G FDS + G
Sbjct: 459 LDIFDKMRKAGFVPDDITFLVVLYACS-----------HCGMVDQGLSYFDSMSADYGLT 507
Query: 418 ------SALVDMYAKCGRLNDARK-VFDHLSSKNLVSWNTML--------VGYAQHGLGR 462
+ +D+ A+ GRL+ A K V D V W +L V A+H L +
Sbjct: 508 PRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNK 567
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 207/406 (50%), Gaps = 31/406 (7%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNV----ISWSALISGFSQIGMPEVALNYF 64
+V+++N ++ Y + A +LF M + N+ ++W+A+I+G+SQ G ALN F
Sbjct: 185 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 244
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS----------GLELNSHVS 114
R M+ PN T + +SACAS G G EIH ++ G + + V
Sbjct: 245 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 304
Query: 115 NCLINMYGKCGLLSSAQFVFD--ASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRK 170
N LI+MY KC +A+ +FD ERN ++W ++ + Q G+ LK+F ++S
Sbjct: 305 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 364
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK---FVAMGLINLYAKCEK 227
GVA + ++ + +L ACA L +++G QIH+ V + ++D FVA LIN+Y+KC
Sbjct: 365 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR-HHQYDSSAYFVANCLINMYSKCGD 423
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+D A VF ++ +W++++ GY G+ EA+D+F KM +G +P ++TF VL A
Sbjct: 424 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 483
Query: 288 FADVKETIGGRQ-LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVV 345
+ G S+ G + +D ++ L+++ KT +M E V
Sbjct: 484 CSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAV 543
Query: 346 SWNALIAGHLASCHYGEAIELLK---DMLFEGHCPNLYTYSNILNI 388
W AL L++C +EL + + L E + N +Y+ I NI
Sbjct: 544 VWVAL----LSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNI 585
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 209/451 (46%), Gaps = 60/451 (13%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
++G + F+ VL AC L + + G H L+ E + F+ L+ +Y++C L+
Sbjct: 3 RAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE 62
Query: 230 LASRVFSNIQ---LPDLTAWSALIGGYAQLGKACEAIDLFVKMF------SSGLMPSEVT 280
AS +F I + D+ +W++++ + + A A+DLF KM + ++
Sbjct: 63 EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 122
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
+L A +K +++H I+ G FV N ++D Y+KC L+E ++K F+ M+
Sbjct: 123 IVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMME 182
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKD------------------------------- 369
DVVSWNA++AG+ S ++ A EL K+
Sbjct: 183 FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 242
Query: 370 ----MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP----------GFDSNVV 415
M+F G PN T ++L+ + + A G + H +K G D +++
Sbjct: 243 VFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLM 302
Query: 416 IGSALVDMYAKCGRLNDARKVFDH--LSSKNLVSWNTMLVGYAQHGLGREALEIYSMM-- 471
+ +AL+DMY+KC AR +FD L +N+V+W M+ G+AQ+G +AL+++ M
Sbjct: 303 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 362
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS-VVHLFACRG 530
+ + PN T +L AC H+ + G ++R H +A+ ++++++ G
Sbjct: 363 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCG 422
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
A S + + + W +++G H
Sbjct: 423 DVDTARHVFDSMS-QKSAISWTSMMTGYGMH 452
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 139/278 (50%), Gaps = 10/278 (3%)
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M +G T +VL A ++ G H LI GF S F+ N ++ YS+C
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 329 LEESLKTFDEMDEH---DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
LEE+ FDE+ + DV+SWN++++ H+ S + A++L M H S+I
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 386 LNISSDIP------AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
++I + +P A+ K+ H ++ G +V +G+AL+D YAKCG + +A KVF+
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ K++VSWN M+ GY+Q G + A E++ M++ I + T+ V++ G E
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
+ F MI G P I SV+ A G + E
Sbjct: 241 LNVFRQMIFS-GSLPNCVTIISVLSACASLGAFSQGME 277
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 191/629 (30%), Positives = 323/629 (51%), Gaps = 67/629 (10%)
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLE-LNSHVSNCLINMYGKCG 125
++C Y V C + K + M + +S + N L+++Y K G
Sbjct: 13 LLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFG 72
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGE---------------------------- 157
L AQ +FD L+R+ SW +LLS+Y + G
Sbjct: 73 KLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSG 132
Query: 158 ---HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
L++F ++ G +E++ S+L A A L +L+ G QIH + + F+
Sbjct: 133 NSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFI 192
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
L ++YAKC +++ A +F + +L +W+ +I GYA+ G+ + I L +M SG
Sbjct: 193 WNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGH 252
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
MP +VT S ++ A Y +C ++E+ +
Sbjct: 253 MPDQVTMSTIIAA-----------------------------------YCQCGRVDEARR 277
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
F E E D+V W A++ G+ + +A+ L +ML E P+ YT S++++ + + +
Sbjct: 278 VFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLAS 337
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
+ G+ H + G ++N+++ SAL+DMY+KCG ++DAR VF+ + ++N+VSWN M+VG
Sbjct: 338 LHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVG 397
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
AQ+G ++ALE++ M + K KP++ TFIG+LSAC+H +E+G YF+S+ HG++P
Sbjct: 398 CAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTP 457
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKI 574
+DH A +V+L G+ +A IK+ +P+ ++W LLS C T D+V AA +
Sbjct: 458 TLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHL 517
Query: 575 LSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTS 634
DP +IMLSN+YA W + A VR +MK K++KK G SW E+ N++H F++
Sbjct: 518 FELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSE 577
Query: 635 RFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ D++E +N L L + G+ P+
Sbjct: 578 DRTHPESEDIYEKLNMLIGKLQEEGFTPN 606
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 227/481 (47%), Gaps = 69/481 (14%)
Query: 6 FHP-NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALIS--------------- 49
F P + +N LL +Y KF ++ DAQ LFD+M +R++ SW+AL+S
Sbjct: 53 FQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATF 112
Query: 50 ----------------GFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDAR 93
GFS P+ +L F+ M EP YT V ++A A D R
Sbjct: 113 DRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLR 172
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
GK+IHG + N + N L +MY KCG + A+++FD ++N +SW ++S Y
Sbjct: 173 YGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYA 232
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
+ G+ + + R SG + + ++++ A
Sbjct: 233 KNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA--------------------------- 265
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
Y +C ++D A RVFS + D+ W+A++ GYA+ G+ +A+ LF +M
Sbjct: 266 --------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEH 317
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ P T S V+ + A + G+ +H I G ++ V++ ++D YSKC ++++
Sbjct: 318 IEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDAR 377
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
F+ M +VVSWNA+I G + H +A+EL ++ML + P+ T+ IL+
Sbjct: 378 SVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCN 437
Query: 394 AIEWGKQTHCCIV-KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTM 451
IE G++ I + G + + +V++ + GR+ A + +++ + + W+T+
Sbjct: 438 WIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTL 497
Query: 452 L 452
L
Sbjct: 498 L 498
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 218/546 (39%), Gaps = 113/546 (20%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I F NV +N L MY K I A+ LFD + ++N++SW+ +ISG+++ G PE
Sbjct: 181 IIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKC 240
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M P+ T ++A
Sbjct: 241 IGLLHQMRLSGHMPDQVTMSTIIAA----------------------------------- 265
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG + A+ VF E++ + W +++ Y + G L +F + ++
Sbjct: 266 YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTL 325
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+SV+ +CA L +L G +H L + V+ LI++Y+KC +D A VF+ +
Sbjct: 326 SSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPT 385
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+A+I G AQ G +A++LF M P VTF +L A L
Sbjct: 386 RNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSAC-----------L 434
Query: 301 HSLIIKMGFSSFTFVANT-----VLDFYS-KCELLEESLKTFDEMDEHDVVSWNALIAGH 354
H I+ G F + N LD Y+ LL + +
Sbjct: 435 HCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRI------------------- 475
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS---DIPAIEWGKQTHCCIVKPGFD 411
+A+ L+K+M H P+ +S +L+I S DI E + H + P
Sbjct: 476 ------EQAVALIKNM---AHDPDFLIWSTLLSICSTKGDIVNAEVAAR-HLFELDPTIA 525
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL-----VSW----NTMLVGYAQHGLGR 462
++ L +MYA GR D V + + SKN+ SW N + ++
Sbjct: 526 VPYIM---LSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHP 582
Query: 463 EALEIYS-------MMQENKIKPNDNTFIGVL-------SACVHIGLVEEGWHYFNSMIR 508
E+ +IY +QE PN N + + S C H E+ F + +
Sbjct: 583 ESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFH---SEKLALAFGLIKK 639
Query: 509 DHGISP 514
+GISP
Sbjct: 640 PNGISP 645
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 212/675 (31%), Positives = 344/675 (50%), Gaps = 17/675 (2%)
Query: 3 TSGFHPNVITYNHLLLM--------YVK-FSRINDAQKLFDEMPERNVISWSALISGFSQ 53
+SG +PN IT L + VK F+ NDA + + +I + +S +
Sbjct: 239 SSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSE------IIFRNKGLSEYLH 292
Query: 54 IGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV 113
G L F MV +E + T++ ++ G+++H + GL+L V
Sbjct: 293 SGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTV 352
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
SN LINMY K A+ VFD ER+ ISW S+++ Q G V + +F+ + G+
Sbjct: 353 SNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL 412
Query: 174 AISEFSCASVLGACAVLGN-LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+++ SVL A + L L + Q+H K D FV+ LI+ Y++ + A
Sbjct: 413 KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
+F DL AW+A++ GY Q + + LF M G + T + V +
Sbjct: 473 ILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF 531
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
G+Q+H+ IK G+ +V++ +LD Y KC + + FD + D V+W +I+
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS 591
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
G + + A + M G P+ +T + + SS + A+E G+Q H +K +
Sbjct: 592 GCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN 651
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+ +G++LVDMYAKCG ++DA +F + N+ +WN MLVG AQHG G+E L+++ M+
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 711
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
IKP+ TFIGVLSAC H GLV E + + SM D+GI P ++H + + G
Sbjct: 712 SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLV 771
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
++A I+S +E + ++R LL+ C+ D G+ A K+L +P D+SA+++LSN+Y
Sbjct: 772 KQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMY 831
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
A A+ WDE R +MK +KKD G SW E++NK+H F + Q ++ + +
Sbjct: 832 AAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMI 891
Query: 653 VHLFDGGYVPDPIYS 667
+ GYVP+ ++
Sbjct: 892 RDIKQEGYVPETDFT 906
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/548 (26%), Positives = 264/548 (48%), Gaps = 38/548 (6%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ +Y+KF ++ + + LF+EMP R+V+ W+ ++ + ++G E A++ L PN
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN 245
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
T + A S D+ +G+ + + +G + +S VS + G
Sbjct: 246 EITL--RLLARISGDDSDAGQV---KSFANGNDASS-VSEIIFRNKG------------- 286
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
LS Y G++ LK F +S V + + +L + +L +
Sbjct: 287 -------------LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLAL 333
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G Q+H + K L+ V+ LIN+Y K K A VF N+ DL +W+++I G AQ
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQLHSLIIKMGFSSFTF 314
G EA+ LF+++ GL P + T + VL A + + E + +Q+H IK+ S +F
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V+ ++D YS+ ++E+ F E D+V+WNA++AG+ S + ++L M +G
Sbjct: 454 VSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
+ +T + + + AI GKQ H +K G+D ++ + S ++DMY KCG ++ A+
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
FD + + V+W TM+ G ++G A ++S M+ + P++ T + A +
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 495 LVEEGWH-YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
+E+G + N++ + P + S+V ++A G AY K + N W
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNA 689
Query: 554 LLSGCKTH 561
+L G H
Sbjct: 690 MLVGLAQH 697
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/561 (22%), Positives = 253/561 (45%), Gaps = 47/561 (8%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ-----IGMPEVAL 61
+P N+L+ MY K + A+++FD+MP+R+++SW+++++ ++Q + + A
Sbjct: 71 NPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAF 130
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
FR++ V+ + T + C G + + HG + GL+ + V+ L+N+Y
Sbjct: 131 LLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIY 190
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS-- 179
K G + + +F+ R+ + W +L +Y + G + + SG+ +E +
Sbjct: 191 LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLR 250
Query: 180 -CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
A + G + G +K + + ++ +F N
Sbjct: 251 LLARISGDDSDAGQVK-------------------------SFANGNDASSVSEIIFRNK 285
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
L + Y G+ + F M S + +VTF +L V G+
Sbjct: 286 GLSE----------YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQ 335
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H + +K+G V+N++++ Y K + FD M E D++SWN++IAG +
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP-AIEWGKQTHCCIVKPGFDSNVVIG 417
EA+ L +L G P+ YT +++L +S +P + KQ H +K S+ +
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS 455
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL+D Y++ + +A +F+ + +LV+WN M+ GY Q G + L+++++M + +
Sbjct: 456 TALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
+D T V C + + +G I+ G + + ++ ++ G A
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQF 573
Query: 538 FIKSSPIEPNKVVWRCLLSGC 558
S P+ P+ V W ++SGC
Sbjct: 574 AFDSIPV-PDDVAWTTMISGC 593
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 191/416 (45%), Gaps = 37/416 (8%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
+ G + + D GK H R+ + N LI+MY KCG L+ A+ VFD
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 139 ERNSISWVSLLSSYCQCGEHV-----HGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
+R+ +SW S+L++Y Q E V +F + R+ V S + + +L C G +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
H K L+ D+FVA L+N+Y K K+ +F + D+ W+ ++ Y
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
++G EAIDL SSGL P+E+T + D + Q+ S SS +
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSD---AGQVKSFANGNDASSVS 278
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+++ N ++ +L S Y ++ DM+
Sbjct: 279 -----------------------------EIIFRNKGLSEYLHSGQYSALLKCFADMVES 309
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
+ T+ +L + + ++ G+Q HC +K G D + + ++L++MY K + A
Sbjct: 310 DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFA 369
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
R VFD++S ++L+SWN+++ G AQ+GL EA+ ++ + +KP+ T VL A
Sbjct: 370 RTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I SG+ ++ + +L MYVK ++ AQ FD +P + ++W+ +ISG + G E A
Sbjct: 544 IKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAF 603
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F M + P+ +T A + G++IH + + V L++MY
Sbjct: 604 HVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMY 663
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A +F N +W ++L Q GE L++F + G+ + +
Sbjct: 664 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 182 SVLGACA 188
VL AC+
Sbjct: 724 GVLSACS 730
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 203/665 (30%), Positives = 346/665 (52%), Gaps = 20/665 (3%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+L + R++DAQ+ R+ + +I G + G+P AL + M+ P+
Sbjct: 48 LVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARPD 107
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL-NSHVSNCLINMYGKCGLLSSAQFVF 134
+T+ + CA G G+ H R G+ + + N L+ Y + GL+ A+ VF
Sbjct: 108 RFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVF 167
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIF------LLSRKSGVAISEFSCASVLGACA 188
D R+ ++W S++ Y G L F L + GV I + L AC
Sbjct: 168 DGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGI-----IAALAACC 222
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ L G ++H+ V + +E D V ++++Y KC + A VF+ + + W+
Sbjct: 223 LESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNC 282
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+IGGYA + EA D FV+M + G VT +L A A + ++ GR +H I +
Sbjct: 283 MIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQ 342
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F + +L+ YSK ++ S K F +M +VSWN +IA ++ Y EAI L
Sbjct: 343 FLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFL 402
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
D+L + P+ +T S ++ + + +Q H I++ G+ N +I +A++ MYA+CG
Sbjct: 403 DLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCG 462
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ +R++FD +++K+++SWNTM++GYA HG GR ALE++S M+ N ++PN++TF+ VL+
Sbjct: 463 DVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLT 522
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC GL +EGW FNSM RD+G+ P+++H + L G + +FI++ PI+P
Sbjct: 523 ACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTF 582
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDP-----EDTSAHIMLSNVYAEANMWDETAK 603
VW LL+ + D+ + YAAE+I + ++T ++++S++YA+A W + +
Sbjct: 583 RVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVER 642
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++ +M+EK L++ S EL F Q + EV N LS + G + D
Sbjct: 643 IKSLMEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFLSGKI---GEMRD 699
Query: 664 PIYSS 668
P+ S
Sbjct: 700 PMNQS 704
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 190/383 (49%), Gaps = 1/383 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM- 67
+V T N LL Y + ++DA+++FD MP R+V++W++++ G+ G+ +AL FR M
Sbjct: 143 DVYTGNSLLAFYARLGLVDDAERVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMH 202
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
++ + + A++AC G+E+H + R G+E + V +++MY KCG +
Sbjct: 203 EALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDI 262
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+SA+ VF R ++W ++ Y F+ + G + + ++L AC
Sbjct: 263 ASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAAC 322
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A + G +H + + + L+ +Y+K K+ + +VF + L +W+
Sbjct: 323 AQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWN 382
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+I Y EAI LF+ + + L P T S V+ AF + RQ+HS II++
Sbjct: 383 NMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRL 442
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
G+ T + N ++ Y++C + S + FD+M DV+SWN +I G+ A+E+
Sbjct: 443 GYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMF 502
Query: 368 KDMLFEGHCPNLYTYSNILNISS 390
+M G PN T+ ++L S
Sbjct: 503 SEMKCNGLRPNESTFVSVLTACS 525
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 144/287 (50%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G +V +L MY K I A+ +F MP R V++W+ +I G++ PE A
Sbjct: 237 VIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEA 296
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M + T + ++ACA + G+ +HG + R + + L+ M
Sbjct: 297 FDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEM 356
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + S++ VF + +SW +++++Y ++ + +FL + F+
Sbjct: 357 YSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTM 416
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++V+ A +LG L+ Q+HS + + + + ++++YA+C + + +F +
Sbjct: 417 SAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAA 476
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
D+ +W+ +I GYA G+ A+++F +M +GL P+E TF VL A
Sbjct: 477 KDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTA 523
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 101/186 (54%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F P+V+ LL MY K ++ ++K+F +M + ++SW+ +I+ + M A+ F
Sbjct: 343 FLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFL 402
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
++ L P+Y+T V A G R +++H + R G N+ + N +++MY +CG
Sbjct: 403 DLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCG 462
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ S++ +FD ++ ISW +++ Y G+ L++F + +G+ +E + SVL
Sbjct: 463 DVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLT 522
Query: 186 ACAVLG 191
AC+V G
Sbjct: 523 ACSVSG 528
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ N + N ++ MY + + ++++FD+M ++VISW+ +I G++ G A
Sbjct: 439 IIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSA 498
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F M C L PN T+V ++AC+ G G M R G+ C+ +
Sbjct: 499 LEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTD 558
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ G+ G L QF+ + ++ W SLL++
Sbjct: 559 LLGRAGDLKEVMQFIENMPIDPTFRVWGSLLTA 591
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 198/660 (30%), Positives = 327/660 (49%), Gaps = 43/660 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G N N LL MY K + DA +LF M N +S++A++ G +Q G + AL
Sbjct: 168 VKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDAL 227
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDA--------RSGKEIHGRMYRSGLELNSHV 113
F M + + + + ACA R G+ IH + R G + HV
Sbjct: 228 RLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHV 287
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
N LI+MY KC + A VF++ +SW L++ + Q G +++ L +++G
Sbjct: 288 GNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGF 347
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+E + +++L +C K + A
Sbjct: 348 EPNEVTYSNLLASCI-----------------------------------KARDVHSARA 372
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+F I P +T W+ L+ GY Q + + I+LF +M + P T + +L + + +
Sbjct: 373 MFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGI 432
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
GRQ+HS ++ + FVA+ ++D YSKC + + F++M E DVV WN++I+G
Sbjct: 433 LDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISG 492
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
EA + K M G P +Y++++N S + +I G+Q H ++K G+D N
Sbjct: 493 LTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQN 552
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V +GSAL+DMYAKCG ++DAR FD + KN+V+WN M+ GYAQ+GLG +A+E++ M
Sbjct: 553 VYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLT 612
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+ KP+ TFI VL+ C H GLV++ +FNSM +GI P +H ++ G+
Sbjct: 613 TEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFV 672
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
I P + + ++W LL+ C H + LG+ AAE + DP++ S +++LSN+YA
Sbjct: 673 EVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYA 732
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
+ + VR +M + + K G SW + ++ + F + G +L N+ S+
Sbjct: 733 SLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVADDLGADGGELTMFSNEDSI 792
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 150/559 (26%), Positives = 273/559 (48%), Gaps = 46/559 (8%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ-IGMPEVALNYFRL 66
PN +YN L + ++ A+ L MP RN +SW+ +IS ++ G A+ +
Sbjct: 72 PNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGR 131
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M L P ++T +SAC G+ HG + GL+ N V N L+ MY KCG
Sbjct: 132 MRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGS 191
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ A +F N +S+ +++ Q G L++F +SGV + S +SVLGA
Sbjct: 192 VGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGA 251
Query: 187 CA--------VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
CA V ++G IH+LV + D+ V LI++Y KC ++D A +VF ++
Sbjct: 252 CAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESL 311
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ +W+ LI G+ Q G +A+++ M +G P+EVT+S +L + I R
Sbjct: 312 PSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLAS------CIKAR 365
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+HS + FD++ V +WN L++G+
Sbjct: 366 DVHS-----------------------------ARAMFDKISRPSVTTWNTLLSGYCQEE 396
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ + IEL + M + P+ T + IL+ S + +++G+Q H V+ +++ + S
Sbjct: 397 QHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVAS 456
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
LVDMY+KCG++ AR +F+ ++ +++V WN+++ G H L +EA + + M+EN I P
Sbjct: 457 GLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMP 516
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
++++ ++++C + + G +++D G + ++++ ++A G A F
Sbjct: 517 TESSYASMINSCSRLSSIPHGRQIHAQVMKD-GYDQNVYVGSALIDMYAKCGNMDDARLF 575
Query: 539 IKSSPIEPNKVVWRCLLSG 557
+ ++ N V W ++ G
Sbjct: 576 FDTMMMK-NIVAWNEMIHG 593
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 246/524 (46%), Gaps = 85/524 (16%)
Query: 47 LISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG 106
L+ +S+ G+P AL FR + PN Y+Y A+SA GD + +++ G M R
Sbjct: 49 LVELYSRAGLPRHALLAFRALP----SPNDYSYNAALSAACRAGDLDAARDLLGGMPR-- 102
Query: 107 LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC-GEHVHGLKIF 165
RN++SW +++S+ + G+ ++++
Sbjct: 103 ---------------------------------RNAVSWNTVISALARSPGDGGEAVEMY 129
Query: 166 LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC 225
R G+ + F+ ASVL AC L L G + H + K L+ ++FV L+ +Y KC
Sbjct: 130 GRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKC 189
Query: 226 EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
+ A R+F + P+ +++A++GG AQ G +A+ LF +M SG+ V+ S VL
Sbjct: 190 GSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVL 249
Query: 286 GAFADVKETIG--------GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
GA A T G+ +H+L+++ GF S V N+++D Y+KC ++E++K F+
Sbjct: 250 GACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFE 309
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
+ +VSWN LI G +A+E+L M G PN TYSN+L
Sbjct: 310 SLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLL----------- 358
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
CI K ++ AR +FD +S ++ +WNT+L GY Q
Sbjct: 359 ----ASCI--------------------KARDVHSARAMFDKISRPSVTTWNTLLSGYCQ 394
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
++ +E++ MQ ++P+ T +LS+C +G+++ G ++ +R + M
Sbjct: 395 EEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVR-FLLHNDMF 453
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ +V +++ GQ A I + E + V W ++SG H
Sbjct: 454 VASGLVDMYSKCGQIGIARS-IFNKMTERDVVCWNSIISGLTIH 496
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 194/387 (50%), Gaps = 35/387 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + N L+ MY K +++A K+F+ +P ++SW+ LI+GF Q G A
Sbjct: 276 VVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKA 335
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ LM EPN TY +++C +++H
Sbjct: 336 VEVLSLMQEAGFEPNEVTYSNLLASCI------KARDVH--------------------- 368
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
SA+ +FD + +W +LLS YCQ +H +++F + V +
Sbjct: 369 --------SARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTL 420
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L +C+ LG L G Q+HS + L D FVA GL+++Y+KC ++ +A +F+ +
Sbjct: 421 AVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTE 480
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+++I G EA D F +M +G+MP+E +++ ++ + + + GRQ+
Sbjct: 481 RDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQI 540
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++K G+ +V + ++D Y+KC ++++ FD M ++V+WN +I G+ +
Sbjct: 541 HAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLG 600
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILN 387
+A+EL + ML P+ T+ +L
Sbjct: 601 DKAVELFEYMLTTEQKPDAVTFIAVLT 627
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 190/388 (48%), Gaps = 18/388 (4%)
Query: 194 KVGMQIHSLV-FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+ G+ H+L+ F+ + + ++ + LD A + + + +W+ +I
Sbjct: 55 RAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISA 114
Query: 253 YAQ-LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
A+ G EA++++ +M + GL+P+ T + VL A + GR+ H + +K+G +
Sbjct: 115 LARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDA 174
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
FV N +L Y+KC + ++++ F M + VS+ A++ G + +A+ L M
Sbjct: 175 NQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMC 234
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEW--------GKQTHCCIVKPGFDSNVVIGSALVDM 423
G + + S++L + A ++ G+ H +V+ GF S+ +G++L+DM
Sbjct: 235 RSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDM 294
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y KC +++A KVF+ L S +VSWN ++ G+ Q G +A+E+ S+MQE +PN+ T+
Sbjct: 295 YTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTY 354
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS-- 541
+L++C+ V F+ + R P + +++ + Q + E +
Sbjct: 355 SNLLASCIKARDVHSARAMFDKISR-----PSVTTWNTLLSGYCQEEQHQDTIELFRRMQ 409
Query: 542 -SPIEPNKVVWRCLLSGCKTHKDLVLGR 568
++P++ +LS C L GR
Sbjct: 410 HQNVQPDRTTLAVILSSCSKLGILDFGR 437
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 162/377 (42%), Gaps = 76/377 (20%)
Query: 313 TFVANTVLDFYSKCELLEESLKTFDE-------------------------------MDE 341
TF+AN +++ YS+ L +L F M
Sbjct: 43 TFLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPR 102
Query: 342 HDVVSWNALIAGHLASC-HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
+ VSWN +I+ S GEA+E+ M EG P +T +++L+ + A+ G++
Sbjct: 103 RNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRR 162
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
H VK G D+N + +AL+ MY KCG + DA ++F ++ N VS+ M+ G AQ G
Sbjct: 163 CHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGS 222
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSAC-------------------VHIGLVEEGW- 500
+AL +++ M + + + + VL AC +H +V +G+
Sbjct: 223 IDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFG 282
Query: 501 ---HYFNSMIRDHGISPRMDHIASV---------------VHLFACRGQTRRAYE---FI 539
H NS+I + MD V + F G +A E +
Sbjct: 283 SDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLM 342
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ + EPN+V + LL+ C +D+ R +KI + P T+ + +LS Y +
Sbjct: 343 QEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKI--SRPSVTTWNTLLSG-YCQEEQHQ 399
Query: 600 ETAKVRKIMKEKSLKKD 616
+T ++ + M+ ++++ D
Sbjct: 400 DTIELFRRMQHQNVQPD 416
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 174/525 (33%), Positives = 294/525 (56%), Gaps = 1/525 (0%)
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
+RN +SW +++S Q + ++ F R G ++F+ +S + ACA LG++++G Q
Sbjct: 3 QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 62
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H L K + + FV L ++Y+KC + A +VF + D +W+A+I GY+++G+
Sbjct: 63 MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 122
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
EA+ F KM + + LGA +K GR +HS ++K+GF S FV N
Sbjct: 123 FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 182
Query: 319 VLDFYSKCELLEESLKTFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
+ D YSK +E + F E +VVS+ LI G++ + + + + ++ +G P
Sbjct: 183 LTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 242
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
N +T+S+++ ++ A+E G Q H ++K FD + + S LVDMY KCG L A + F
Sbjct: 243 NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAF 302
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D + ++WN+++ + QHGLG++A++I+ M + +KPN TFI +L+ C H GLVE
Sbjct: 303 DEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVE 362
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
EG YF SM + +G+ P +H + V+ L G+ + A EFI P EPN W L
Sbjct: 363 EGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGA 422
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
C+ H D +G+ AAEK++ +P+++ A ++LSN+YA W++ VR M++ ++KK
Sbjct: 423 CRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLP 482
Query: 618 GCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
G SW ++ K H F ++ + ++E ++ L + GYVP
Sbjct: 483 GYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVP 527
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 235/462 (50%), Gaps = 17/462 (3%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG 95
MP+RN++SW+A+ISG SQ A+ F M C P + + A+ ACAS G G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
K++H + G+ V + L +MY KCG + A VF+ ++ +SW +++ Y +
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
GE L F V I + S LGAC L K G +HS V K E D FV
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 216 MGLINLYAKCEKLDLASRVFS-NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
L ++Y+K ++ AS VF + + ++ +++ LI GY + + + + +FV++ G+
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
P+E TFS ++ A A+ G QLH+ ++K+ F FV++ ++D Y KC LLE++++
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
FDE+ + ++WN+L++ +AI++ + M+ G PN T+ ++L S
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360
Query: 395 IEWGKQTHCCIVKPGFDSNVVIG----SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWN 449
+E G + K VV G S ++D+ + GRL +A++ + + N W
Sbjct: 361 VEEGLDYFYSMDKT---YGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 417
Query: 450 TMLVGYAQHG---LGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ L HG +G+ A E + K++P ++ + +LS
Sbjct: 418 SFLGACRIHGDKEMGKLAAE-----KLVKLEPKNSGALVLLS 454
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 217/470 (46%), Gaps = 52/470 (11%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G + ++L MY K + DA K+F+EMP ++ +SW+A+I G+S+IG E AL F
Sbjct: 71 GIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAF 130
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M+ + + + + AC + + G+ +H + + G E + V N L +MY K
Sbjct: 131 KKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKA 190
Query: 125 GLLSSAQFVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
G + SA VF E RN +S+ L+ Y + + GL +F+ R+ G+ +EF+ +S+
Sbjct: 191 GDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSL 250
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
+ ACA L+ G Q+H+ V K + D FV+ L+++Y KC L+ A + F I P
Sbjct: 251 IKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTE 310
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
AW++L+ + Q G +AI +F +M G+ P+ +TF
Sbjct: 311 IAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFI--------------------- 349
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVS----WNALIAGHLASC 358
++L S L+EE L F MD+ + VV ++ +I +
Sbjct: 350 --------------SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAG 395
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSNVVI 416
EA E + M FE PN + + + L E GK +VK P +V+
Sbjct: 396 RLKEAKEFINRMPFE---PNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVL 452
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSS---KNLVSWNTMLVGYAQHGLGRE 463
L ++YA + D R V + K L ++ + VGY H G E
Sbjct: 453 ---LSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAE 499
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 133/300 (44%), Gaps = 39/300 (13%)
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
M + ++VSW A+I+G + + EAI M G P + +S+ + + + +IE G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
KQ HC +K G S + +GS L DMY+KCG + DA KVF+ + K+ VSW M+ GY++
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSAC-----------VHIGLVEEGWH---YFN 504
G EAL + M + ++ + + L AC VH +V+ G+ +
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF----------------------IKSS 542
+ + D + + + S ++F + R + ++
Sbjct: 181 NALTD--MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 238
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD-PEDTSAHIMLSNVYAEANMWDET 601
IEPN+ + L+ C L G +++ + ED +L ++Y + + ++
Sbjct: 239 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 298
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 191/601 (31%), Positives = 313/601 (52%), Gaps = 3/601 (0%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE-PNYYTYVGAVSACA 87
A+KLFDE+ ++ SW+A+I ++ G+ AL F M+ P+ YTY + AC
Sbjct: 75 ARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACG 134
Query: 88 SRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVS 147
G IH R SG + ++ V N L+ MY CG + A+ VFD ER +SW +
Sbjct: 135 DYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNT 194
Query: 148 LLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
+++ Y + G L +F G+ + SVL C+ L L+VG ++H+LV
Sbjct: 195 MINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKN 254
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
L D V L+++YAKC +D A +F + D+ +W+ ++ GY G A A+ L
Sbjct: 255 LGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQ 314
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
M + P+ VT + VL A A + GR LH I+ S V ++D Y+KC
Sbjct: 315 MMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCN 374
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
+ S + F + + WNA+I+G + + +AIEL K ML E PN T +++L
Sbjct: 375 NVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLP 434
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL--SSKNL 445
+ + ++ + H +++ GF S + + + L+D+Y+KCG L A +F+ + K++
Sbjct: 435 AYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDI 494
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
++W+ ++ GY HG G A+ ++ M ++ +KPN+ TF +L AC H GLV+EG F
Sbjct: 495 ITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKF 554
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
M+ D+ +S R DH V+ L G+ AYE I++ PN VW LL C H+++
Sbjct: 555 MLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVE 614
Query: 566 LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQ 625
LG AA+ + +P +T +++L+N+Y+ W + VR +M L+K S E++
Sbjct: 615 LGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVR 674
Query: 626 N 626
N
Sbjct: 675 N 675
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 239/458 (52%), Gaps = 10/458 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SGF + N L+ MY+ + A+++FD M ER ++SW+ +I+G+ + G + AL
Sbjct: 150 VMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEAL 209
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M+ +EP+ T V + C+ + G+ +H + L + V N L++MY
Sbjct: 210 MVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMY 269
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + AQ +F +R+ +SW ++++ Y G+ L + + + V + + A
Sbjct: 270 AKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLA 329
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SVL ACA L +LK G +H + LE + V LI++YAKC ++L+ RVFS
Sbjct: 330 SVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQ 389
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
W+A+I G G + +AI+LF +M + P++ T + +L A+A + + R +H
Sbjct: 390 RTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMH 449
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM--DEHDVVSWNALIAGHLASCH 359
+I+ GF S VA ++D YSKC LE + F+ + + D+++W+A+IAG+ H
Sbjct: 450 GYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGH 509
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG-- 417
AI L M+ G PN T+++IL+ S ++ G +++ D+ + +
Sbjct: 510 GETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLE---DNQMSLRTD 566
Query: 418 --SALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTML 452
+ ++D+ + GRL +A ++ ++ + N W +L
Sbjct: 567 HYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALL 604
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 201/669 (30%), Positives = 349/669 (52%), Gaps = 42/669 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
IT VI N + +++ R+ DA++LF MP R+ +++ +++G++ G AL
Sbjct: 99 ITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQAL 158
Query: 62 NYFRLMVCCVLEPNYYTY---VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
++FR + P+ ++Y + A+ +S D R+ ++ +S N +I
Sbjct: 159 SFFR----SIPRPDSFSYNTLLHALGVSSSLADVRA-------LFDEMPVKDSVSYNVMI 207
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+ + GL+S A+ FD + E++++SW +L++Y + G ++F SR AIS
Sbjct: 208 SSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFD-SRTEWDAIS-- 264
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINL------YAKCEKLDLAS 232
L G S + + F+K +++ YA+ + A
Sbjct: 265 -----------WNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEAR 313
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
R+F + D+ W+A++ GYAQ G EA +F M + V+++ ++ A+ +
Sbjct: 314 RLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDK----NAVSWNAMMAAYVQRR 369
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
++L + +S+ NT+L Y++ +L+E+ F M + D VSW A++A
Sbjct: 370 MMEEAKELFDAMPCRNVASW----NTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLA 425
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
+ E ++L K+M G N ++ +L+ +DI A+E G Q H ++K G+
Sbjct: 426 AYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGV 485
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+G+AL+ MY KCG + +A F+ + +++VSWNTM+ GYA+HG G+EALE++ M+
Sbjct: 486 GCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMR 545
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+ KP+D T +GVL+AC H GLVE+G YF SM RD G++ + +H ++ L G+
Sbjct: 546 KTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRL 605
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
A +K P EP+ +W LL + H++ LGR AAEKI +PE+ +++LSN+Y
Sbjct: 606 DEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIY 665
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
A + W + K+R IM E+ +KK G SW E+QNK+H FS + D++ + L
Sbjct: 666 ASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLD 725
Query: 653 VHLFDGGYV 661
+ + GYV
Sbjct: 726 IRMKKAGYV 734
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G+ N LL MY K + +A F+EM ER+V+SW+ +I+G+++ G + A
Sbjct: 478 LIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEA 537
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F M +P+ T VG ++AC+ G G M+R G+ C+I+
Sbjct: 538 LEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMID 597
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ G+ G L A + D E +S W +LL +
Sbjct: 598 LLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGA 630
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 41/185 (22%)
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
C KP D V+ + + + + GR+ DA ++F + ++ ++NTML GYA +G
Sbjct: 98 CITGKP--DMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLP 155
Query: 463 EAL----------------------------EIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+AL ++ ++ E +K + + + + S H G
Sbjct: 156 QALSFFRSIPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANH-G 214
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIA--SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
LV HYF+ ++P D ++ ++ + G+ + A E S E + + W
Sbjct: 215 LVSLARHYFD-------LAPEKDAVSWNGMLAAYVRNGRIQEARELFDSR-TEWDAISWN 266
Query: 553 CLLSG 557
L++G
Sbjct: 267 ALMAG 271
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 196/653 (30%), Positives = 333/653 (50%), Gaps = 72/653 (11%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ Y + + +++FD M ++NV W+ ++S +++IG + ++ F++MV
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMV------- 54
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
K I G+ S EL FD
Sbjct: 55 -------------------EKGIEGKRSESASEL------------------------FD 71
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+R+ ISW S++S Y G GL I+ G+ + + SVL CA G L +
Sbjct: 72 KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSL 131
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +HSL K + E + L+++Y+KC LD A RVF + ++ +W+++I GY +
Sbjct: 132 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 191
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G + AI L +M G+ V + +L A A G+ +H I +S FV
Sbjct: 192 DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFV 251
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
N ++D Y+KC +E + F M D++SWN ++ G L
Sbjct: 252 CNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV-GELK------------------- 291
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+ T + IL + + A+E GK+ H I++ G+ S+ + +ALVD+Y KCG L AR
Sbjct: 292 -PDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 350
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+FD + SK+LVSW M+ GY HG G EA+ ++ M++ I+P++ +FI +L AC H GL
Sbjct: 351 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 410
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+E+GW +F M D I P+++H A +V L + G +AY+FI++ PI P+ +W LL
Sbjct: 411 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 470
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
GC+ + D+ L AE++ +PE+T +++L+N+YAEA W+E ++R+ + +K L+K
Sbjct: 471 CGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRK 530
Query: 616 DTGCSWTELQNKMHYF-STSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
+ GCSW E++ +++ F S + + + ++ ++ + + GY P Y+
Sbjct: 531 NPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYA 583
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 223/452 (49%), Gaps = 25/452 (5%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F ++ + ++ ++ R A +LFD++ +R+VISW+++ISG+ G+ E L ++
Sbjct: 43 FKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 102
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M+ ++ + T + + CA G GK +H +S E + SN L++MY KCG
Sbjct: 103 QMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 162
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L A VF+ ERN +SW S+++ Y + G + + K GV + + S+L
Sbjct: 163 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILH 222
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
ACA G+L G +H + + + FV L+++YAKC ++ A+ VFS + + D+ +
Sbjct: 223 ACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIIS 282
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ ++G L P T + +L A A + G+++H I+
Sbjct: 283 WNTMVG---------------------ELKPDSRTMACILPACASLSALERGKEIHGYIL 321
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
+ G+SS VAN ++D Y KC +L + FD + D+VSW +IAG+ + EAI
Sbjct: 322 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIA 381
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--SALVDM 423
+M G P+ ++ +IL S +E G + I+K F+ + + +VD+
Sbjct: 382 TFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDL 440
Query: 424 YAKCGRLNDARKVFDHLS-SKNLVSWNTMLVG 454
++ G L+ A K + L + + W +L G
Sbjct: 441 LSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 196/428 (45%), Gaps = 52/428 (12%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I S F + N LL MY K ++ A ++F++M ERNV+SW+++I+G+++ G + A+
Sbjct: 140 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAI 199
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M ++ + + ACA G +GK++H + + + N V N L++MY
Sbjct: 200 ILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMY 259
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A VF + ++ ISW +++ GE + + A
Sbjct: 260 AKCGSMEGANSVFSTMVVKDIISWNTMV------GE---------------LKPDSRTMA 298
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L ACA L L+ G +IH + + D+ VA L++LY KC L LA +F I
Sbjct: 299 CILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 358
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
DL +W+ +I GY G EAI F +M +G+ P EV+F +L A + H
Sbjct: 359 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS-----------H 407
Query: 302 SLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSWN 348
S +++ G+ F + N ++D S+ L ++ K + + D W
Sbjct: 408 SGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWG 467
Query: 349 ALIAGHLASCHYGEAIEL---LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
AL+ G C IEL + + +FE N Y + NI ++ E K+ I
Sbjct: 468 ALLCG----CRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKI 523
Query: 406 VKPGFDSN 413
K G N
Sbjct: 524 GKKGLRKN 531
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 102/240 (42%), Gaps = 38/240 (15%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ + N L+ +YVK + A+ LFD +P ++++SW+ +I+G+ G A
Sbjct: 320 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 379
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
+ F M +EP+ +++ + AC+ G G M +E C+++
Sbjct: 380 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVD 439
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+ + G LS A +F+ + ++ W +LL CG
Sbjct: 440 LLSRTGNLSKAYKFIETLPIAPDATIWGALL-----CG---------------------- 472
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
C + ++++ ++ VF+ E + + L N+YA+ EK + R+ I
Sbjct: 473 --------CRIYHDIELAEKVAERVFELEPENTGYYVL-LANIYAEAEKWEEVKRMREKI 523
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 204/629 (32%), Positives = 329/629 (52%), Gaps = 11/629 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ITSG ++ + L+ Y +++A+KLFDE+ +R + ++ +I + G A
Sbjct: 47 LITSGL-LSIDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEA 105
Query: 61 LNYFRLMV----CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
+ F M+ CC P+ YTY + AC+ G+ +HG S + V N
Sbjct: 106 MKVFLEMLGSKDCC---PDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNS 162
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
L+ MY CG + A+ VFDA E++ +SW ++++ Y + G L +F SGV I
Sbjct: 163 LLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEID 222
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
S SVL AC L L+VG ++H LV + L K V+ L+++YAKC +D A VF
Sbjct: 223 GASVVSVLPACGYLKELEVGRRVHGLVEEKVLG-KKIVSNALVDMYAKCGSMDEARLVFD 281
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
N+ D+ +W+++I GY G A A+ LF M GL P+ VT + +L A A +
Sbjct: 282 NMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKD 341
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
GR LH ++K S V +++D Y+KC L S F V WNAL++G +
Sbjct: 342 GRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVH 401
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ EAI L K ML EG N T +++L + ++ + +++ GF SN+ +
Sbjct: 402 NKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQV 461
Query: 417 GSALVDMYAKCGRLNDARKVFDHL--SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
++L+D+Y+KCG L A K+F+ + +++ W+ ++ GY HG G A+ ++ M ++
Sbjct: 462 ATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQS 521
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
+KPND TF VL +C H G+V++G + F M++DH P DH +V L G+
Sbjct: 522 GVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDE 581
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
AY+ IK+ P P VW LL C H+++ LG AA + +P +T +++L+ +YA
Sbjct: 582 AYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAA 641
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
W++ VR+ M + L+K S E
Sbjct: 642 LGRWEDAENVRQRMDDIGLRKAPAHSLIE 670
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 200/636 (31%), Positives = 322/636 (50%), Gaps = 67/636 (10%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
+SA RG+ +++ M ++ N LI+ + K G + + + F+ + +N
Sbjct: 94 ISANVQRGNLDEARKLFDEMPQT----NEISWTALISGFMKYGRVRESMWYFERNPFQNV 149
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
+SW + +S Y Q G V +K+F+ +S V ++ + SV+ ACA LG+ +GM + L
Sbjct: 150 VSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGL 209
Query: 203 VFKCALEFDKFVAMGLI-------------------------------NLYAKCEKLDLA 231
+ K E D V+ LI +LY + ++L A
Sbjct: 210 IVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEA 269
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
R+F + + +WSA+I Y Q G E++ LF +M G P+ FS +L A A V
Sbjct: 270 RRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASV 329
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL- 350
+ G +H + K+GF FV+++++D Y KC ++ FD + E ++VSWNA+
Sbjct: 330 EALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMV 389
Query: 351 ------------------------------IAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
IAGHL + E E+ +M+ G PN
Sbjct: 390 GGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKS 449
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T+S++L + +++ GK H IVK G + +G+AL DMYAK G + ++KVF+ +
Sbjct: 450 TFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRM 509
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE-NKIKPNDNTFIGVLSACVHIGLVEEG 499
KN VSW M+ G A+ GL E+L ++ M++ + I PN+ F+ VL AC H GLV++G
Sbjct: 510 PKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKG 569
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK 559
YFNSM +G+ P+ H VV + + G+ A EFI S P +P W LLSGCK
Sbjct: 570 LWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCK 629
Query: 560 THKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGC 619
T+K+ L A K+ ++ + +++LSN+YA A W + KVRK+MK K LKK GC
Sbjct: 630 TYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGC 689
Query: 620 SWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
SW E+++++H F + A Q +++E++ L +
Sbjct: 690 SWVEIRDRVHSFYSEDGAHSQSAEIYEILELLGYEM 725
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 147/546 (26%), Positives = 244/546 (44%), Gaps = 91/546 (16%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N I++ L+ ++K+ R+ ++ F+ P +NV+SW+A ISG+ Q G A+ F ++
Sbjct: 117 NEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLL 176
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI---------- 118
++PN T+ V ACA+ GD G + G + ++G E + VSN LI
Sbjct: 177 ESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIH 236
Query: 119 ---------------------NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
++Y + L A+ +FD +RN +SW ++++ YCQ G
Sbjct: 237 LAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGY 296
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
L++F + G + +S+L A A + L+ GM IH V K E D FV+
Sbjct: 297 PEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSS 356
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA------------------ 259
LI++Y KC + +F I ++ +W+A++GGY+ G
Sbjct: 357 LIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSW 416
Query: 260 ---------CEAID----LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
CE D +F +M G +P++ TFS +L A A G+ LH I+K
Sbjct: 417 SAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVK 476
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
+G T+V + D Y+K +E S K F+ M + + VSW A+I G S E++ L
Sbjct: 477 LGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTL 536
Query: 367 LKDMLFEGH-CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG---FDS-NVVIG---- 417
++M PN + +L S H +V G F+S V G
Sbjct: 537 FEEMEKTSSIAPNEVMFLAVLFACS-----------HSGLVDKGLWYFNSMEAVYGLKPK 585
Query: 418 ----SALVDMYAKCGRLNDARK-VFDHLSSKNLVSWNTMLVG---YAQHGLG-REALEIY 468
+ +VDM ++ GRL +A + ++ +W +L G Y L R A +++
Sbjct: 586 GRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLW 645
Query: 469 SMMQEN 474
M ++N
Sbjct: 646 EMAEKN 651
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 130/540 (24%), Positives = 231/540 (42%), Gaps = 136/540 (25%)
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK----------- 227
+C S+L G ++ G +H+ +FK + ++++++ L+ +Y K
Sbjct: 23 TCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDF 82
Query: 228 --------------------LDLASRVFSNIQLPDLTAWSAL------------------ 249
LD A ++F + + +W+AL
Sbjct: 83 DGFDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFE 142
Query: 250 -------------IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
I GY Q G + EA+ LF+K+ S + P++VTF+ V+ A A++ +
Sbjct: 143 RNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGL 202
Query: 297 GRQLHSLIIKMGFSSFTFVANT-------------------------------VLDFYSK 325
G + LI+K G+ V+N+ +LD Y +
Sbjct: 203 GMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVE 262
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
+ L E+ + FDEM + + VSW+A+IA + S + E++ L M+ EG PN+ +S+I
Sbjct: 263 MDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSI 322
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L+ + + A++ G H + K GF+ +V + S+L+DMY KCG D R +FD + KN+
Sbjct: 323 LSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNM 382
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
VSWN M+ GY+ +G EA ++++M N+ ++ +++ + +E + FN
Sbjct: 383 VSWNAMVGGYSLNGHMEEAKYLFNIMPVR----NNVSWSAIIAGHLDCEQFDEMFEVFNE 438
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
MI I PNK + LL C + L
Sbjct: 439 MILLGEI---------------------------------PNKSTFSSLLCACASTASLD 465
Query: 566 LGRYAAEKILSTDPE-DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
G+ KI+ + DT L+++YA++ + + KV M +K+ SWT +
Sbjct: 466 KGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKN-----EVSWTAM 520
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 132/282 (46%), Gaps = 34/282 (12%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF +V + L+ MY K D + LFD + E+N++SW+A++ G+S G E A F
Sbjct: 346 GFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLF 405
Query: 65 RLMV----------------CCVLE---------------PNYYTYVGAVSACASRGDAR 93
+M C + PN T+ + ACAS
Sbjct: 406 NIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLD 465
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
GK +HG++ + G++ +++V L +MY K G + S++ VF+ ++N +SW +++
Sbjct: 466 KGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLA 525
Query: 154 QCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGM-QIHSLVFKCALEFD 211
+ G L +F + + S +A +E +VL AC+ G + G+ +S+ L+
Sbjct: 526 ESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPK 585
Query: 212 KFVAMGLINLYAKCEKLDLASR-VFSNIQLPDLTAWSALIGG 252
++++ ++ +L A ++S P+ AW+AL+ G
Sbjct: 586 GRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSG 627
>gi|15231917|ref|NP_188091.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274207|sp|Q9LUC2.1|PP231_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14730
gi|9294394|dbj|BAB02404.1| unnamed protein product [Arabidopsis thaliana]
gi|332642039|gb|AEE75560.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 653
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 313/589 (53%), Gaps = 12/589 (2%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNCLINMYGKCGLLSSAQFV 133
N T + + CA R D SG++IHG M R G L+ + L+NMY KCGL+ A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F S ER+ + +L+S + G + ++ + R +G+ +++ S+L + L
Sbjct: 119 FGGS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-EL 176
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL---TAWSALI 250
++H L FK + D +V GL+ Y+K ++ A +VF +LPD W+AL+
Sbjct: 177 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFD--ELPDRDDSVLWNALV 234
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
GY+Q+ + +A+ +F KM G+ S T + VL AF + GR +H L +K G
Sbjct: 235 NGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSG 294
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S V+N ++D Y K + LEE+ F+ MDE D+ +WN+++ H + + L + M
Sbjct: 295 SDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERM 354
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF----DSNVVIGSALVDMYAK 426
L G P++ T + +L + ++ G++ H ++ G SN I ++L+DMY K
Sbjct: 355 LCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVK 414
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG L DAR VFD + K+ SWN M+ GY G AL+++S M +KP++ TF+G+
Sbjct: 415 CGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGL 474
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L AC H G + EG ++ M + I P DH A V+ + + AYE S PI
Sbjct: 475 LQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICD 534
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
N VVWR +LS C+ H + L A +++ +PE ++++SNVY EA ++E VR
Sbjct: 535 NPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRD 594
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
M+++++KK GCSW L+N +H F T + +H+ ++ + H+
Sbjct: 595 AMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHM 643
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 220/475 (46%), Gaps = 26/475 (5%)
Query: 1 MITSGF---HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP 57
M+ GF P T L+ MY K + A +F ER+V ++ALISGF G P
Sbjct: 86 MVRKGFLDDSPRAGT--SLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSP 142
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
A+ +R M + P+ YT+ + + + K++HG ++ G + + +V + L
Sbjct: 143 LDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSGL 201
Query: 118 INMYGKCGLLSSAQFVFDASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+ Y K + AQ VFD +R +S+ W +L++ Y Q L +F R+ GV +S
Sbjct: 202 VTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVS 261
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+ SVL A V G++ G IH L K D V+ LI++Y K + L+ A+ +F
Sbjct: 262 RHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFE 321
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ DL W++++ + G + LF +M SG+ P VT + VL +
Sbjct: 322 AMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQ 381
Query: 297 GRQLHSLIIKMGF----SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
GR++H +I G SS F+ N+++D Y KC L ++ FD M D SWN +I
Sbjct: 382 GREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMIN 441
Query: 353 GH-LASCHYGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI----- 405
G+ + SC GE A+++ M G P+ T+ +L S + G+ +
Sbjct: 442 GYGVQSC--GELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYN 499
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKV-FDHLSSKNLVSWNTMLVGYAQHG 459
+ P D + +DM + +L +A ++ N V W ++L HG
Sbjct: 500 ILPTSDHYACV----IDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHG 550
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 329/579 (56%), Gaps = 14/579 (2%)
Query: 90 GDARSGKEIHGRMYRSG-LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
G+ +GK IH +M R+ ++ H N LI YGKCG L A+ +FDA RN++S L
Sbjct: 25 GELCTGKAIHAQMIRAAHFDVIQH--NHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLL 82
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
+S Y G H L + + + +++E+ ++ L A A + + +G Q H K L
Sbjct: 83 MSGYASAGRHSDALALL---KAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGL 139
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+ +V ++++Y +C ++ A +VF N+ D+ A++++I G+ LG+ +I +
Sbjct: 140 QEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRS 199
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M V++ VLG A KE + G Q+H+ +K +V + ++D Y KC+
Sbjct: 200 MVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDC 259
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
++ F+ + E +VVSW A++ + + + +A++L D+ EG PN +TY+ LN
Sbjct: 260 ARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNS 319
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ + A++ G +K G + + +AL++MY+K G ++DA +VF + +++VSW
Sbjct: 320 CAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSW 379
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
N++++GYA HGL REA+ ++ M +I P+ TF+GVL AC +GLV+EG +Y N M++
Sbjct: 380 NSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMK 439
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
+ GI P +H +V L G+ A +FI S+ I + V W+ LLS C+ +K+ LG
Sbjct: 440 EMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGH 499
Query: 569 YAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKM 628
AE+IL P D +++LSN+YA+AN WD KVRK+M+E+ ++K+ G SW ++ +++
Sbjct: 500 RVAEQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEV 559
Query: 629 HYFSTS----RFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
H F++ ++ I L E++ Q+ V GYVP+
Sbjct: 560 HVFTSEDKNHKWINQITIKLKELIGQIKVI----GYVPN 594
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 141/544 (25%), Positives = 256/544 (47%), Gaps = 31/544 (5%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H +VI +NHL+ Y K R+ A+++FD MP RN +S + L+SG++ G AL L
Sbjct: 42 HFDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGRHSDAL---AL 98
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
+ N Y A+SA A G++ HG +SGL+ + +V N +++MY +C
Sbjct: 99 LKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAH 158
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ A VF+ + ++ S+++ + GE ++I S +VLG
Sbjct: 159 VEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGH 218
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA L +G Q+H+ K LE + +V L+++Y KC+ A F + ++ +W
Sbjct: 219 CASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSW 278
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+A++ Y Q + +A+ LF+ + G+ P+E T++ L + A + G L + +K
Sbjct: 279 TAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMK 338
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---EA 363
G V N +++ YSK + ++ + F M DVVSWN++I G+ H+G EA
Sbjct: 339 TGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGY---AHHGLAREA 395
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGS 418
+ + DML P+ T+ +L + + ++ G + +KPG + +
Sbjct: 396 MCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHY----T 451
Query: 419 ALVDMYAKCGRLNDARK-VFDHLSSKNLVSWNTMLVG---YAQHGLGREALEIYSMMQEN 474
+V + + GRL++A + + + ++V+W ++L Y +GLG E Q
Sbjct: 452 CMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAE-----QIL 506
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD----HIASVVHLFACRG 530
++KPND +LS +G ++R+ G+ + S VH+F
Sbjct: 507 QLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTSED 566
Query: 531 QTRR 534
+ +
Sbjct: 567 KNHK 570
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 184/362 (50%), Gaps = 2/362 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG + N +L MY + + + DA K+F+ + ++ +++++I+GF +G + ++
Sbjct: 135 VKSGLQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSI 194
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
R MV V + ++ +YV + CAS + G ++H + + LE N +V + L++MY
Sbjct: 195 RIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMY 254
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
GKC A F+ E+N +SW +++++Y Q L++FL GV +EF+ A
Sbjct: 255 GKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYA 314
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
L +CA L LK G + + K V L+N+Y+K + A RVF ++
Sbjct: 315 VALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWR 374
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W+++I GYA G A EA+ +F M + ++PS VTF VL A A + G
Sbjct: 375 DVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYL 434
Query: 302 SLIIK-MGFSSFTFVANTVLDFYSKCELLEESLK-TFDEMDEHDVVSWNALIAGHLASCH 359
++++K MG ++ + L+E+ + DVV+W +L++ +
Sbjct: 435 NIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKN 494
Query: 360 YG 361
YG
Sbjct: 495 YG 496
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 193/650 (29%), Positives = 338/650 (52%), Gaps = 3/650 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I H N + + L + ++ A+++FD+MP R++ SW+A++ G+ PE AL
Sbjct: 20 IEKSMHSNHVDTHSQLQDLIDSGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEAL 79
Query: 62 NYFRLMVCCVLEPNYYTYVGAVS--ACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
F M L + TYV +V+ AC + G+ +H ++ L + V + L++
Sbjct: 80 ILFSAMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLD 139
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEF 178
MY + G + + VF RNS++W + ++ G H GL+ F +SR ++ F
Sbjct: 140 MYMRIGKIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTF 199
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ A L ACA L +K G +IH+ V +VA L +Y +C ++ R+F ++
Sbjct: 200 AFAIALKACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESM 259
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ W++LI Y ++G+ +A++ F+ M +S + P+E TF+ A A + + G
Sbjct: 260 SERDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGE 319
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
QLH + +G V+N+++ YS C L+ + F M D++SW+ +I G+ +
Sbjct: 320 QLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAA 379
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
E + M G P + +++L++S + +E G+Q H + G + N I S
Sbjct: 380 FGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRS 439
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL++MY+KCG + +A KVF+ ++VS M+ GYA+HG EA++++ + +P
Sbjct: 440 ALINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRP 499
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+D TFI VL+AC H G ++ G+ YFN M ++ + P +H +V L G+ A +
Sbjct: 500 DDVTFISVLTACSHSGQLDLGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKM 559
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I P + + VVW LL CK D+ GR AA++IL DP + + L+N+++ W
Sbjct: 560 INEMPWKKDDVVWTTLLRACKEKGDVERGRRAAQRILELDPTSFTTLVTLANIHSSTGNW 619
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVM 648
E A VRK MK K + K+ G S +++++ F++ + Q D+ ++
Sbjct: 620 KEAANVRKDMKSKGVIKEPGWSSILIKDQVSAFASGSLSHPQSEDVCSIL 669
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 179/364 (49%), Gaps = 24/364 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF + N L MY + + D +LF+ M ER+V+ W++LI+ + +IG E A
Sbjct: 224 VIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEEKA 283
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+N F LM + PN T+ +ACAS G+++HG ++ GL + VSN ++ M
Sbjct: 284 VNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKM 343
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y C L SA +F R+ ISW +++ Y Q K F R++G ++F+
Sbjct: 344 YSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTDFAL 403
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L ++ L+ G Q+H+L LE + + LIN+Y+KC + AS+VF
Sbjct: 404 ASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEEKDR 463
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ + +A+I GYA+ GK EAIDLF K P +VTF VL A +
Sbjct: 464 TDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACS----------- 512
Query: 301 HSLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSW 347
HS + +GF F + ++D + L ++ K +EM + D V W
Sbjct: 513 HSGQLDLGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVW 572
Query: 348 NALI 351
L+
Sbjct: 573 TTLL 576
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 182/575 (31%), Positives = 317/575 (55%), Gaps = 3/575 (0%)
Query: 92 ARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE--RNSISWVSLL 149
++ +IH ++ + L + N L+N+Y KCG + +F ++ + +N +SW SL+
Sbjct: 43 SKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLI 102
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ + L F R+SGV + ++ ++VL AC G Q+HSLV+K
Sbjct: 103 TQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFL 162
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
+ FV L+++YAKC + +A +VF + + +L +W+ +I G+ Q +AI F +
Sbjct: 163 AEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTL 222
Query: 270 FSSGLMP-SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
L EV+FS V A A+ G+Q+H + +K+G + ++ N++ D Y KC L
Sbjct: 223 LLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGL 282
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+ K F DVV+WN +I ++ + +Y +A M +G P+ +YS++L+
Sbjct: 283 FNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHS 342
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+++ A+ G H I++ GF N+ + S+L+ MYAKCG L DA ++F+ +N+V W
Sbjct: 343 CANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCW 402
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
++ QHG +E++ M IKP+ TF+ VLSAC H G VEEG+ YFNSMI+
Sbjct: 403 TAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIK 462
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
HGI P +H A +V L + G+ RA FI+ PI+P+ VW LLS C+ H +L++G+
Sbjct: 463 VHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGK 522
Query: 569 YAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKM 628
A K+ +P++ +++L N+ M +E +VR+ M+ ++K+ GCSW +++N
Sbjct: 523 EVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNST 582
Query: 629 HYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ F+ + + +++E++ +L + GYV +
Sbjct: 583 YVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAE 617
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 245/487 (50%), Gaps = 17/487 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPE 58
+IT+ +N+LL +Y K ++ LF P+ +NV+SW++LI+ ++ P
Sbjct: 53 LITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPF 112
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
AL +F M + PN+YT+ +SAC + G+++H +++ G V + L+
Sbjct: 113 KALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALV 172
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISE 177
+MY KC + A+ VF+ RN +SW +++ + Q + + F L ++ A+ E
Sbjct: 173 DMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDE 232
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
S +SV ACA GNL+ G Q+H + K + ++ L ++Y KC + +++FSN
Sbjct: 233 VSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSN 292
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
D+ W+ +I Y +A + F M G +P E ++S VL + A++ G
Sbjct: 293 TGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQG 352
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+H+ II+ GF VA++++ Y+KC L ++ + F+E ++ +VV W A+IA
Sbjct: 353 TLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQH 412
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-----PGFDS 412
H +EL + ML EG P+ T+ ++L+ S +E G ++K PG +
Sbjct: 413 GHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEH 472
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG---LGRE-ALEI 467
I VD+ ++ G L+ A++ + + K S W +L H +G+E AL++
Sbjct: 473 YACI----VDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKL 528
Query: 468 YSMMQEN 474
+ + +N
Sbjct: 529 FDLEPDN 535
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 180/426 (42%), Gaps = 44/426 (10%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L MY K ND KLF R+V++W+ +I + E A N F +M
Sbjct: 271 NSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSI 330
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P+ +Y + +CA+ G IH ++ RSG N V++ LI MY KCG L A +
Sbjct: 331 PDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQI 390
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHG---LKIFLLSRKSGVAISEFSCASVLGACAVL 190
F+ + +RN + W +++++ C +H H +++F + G+ + SVL AC+
Sbjct: 391 FEETEDRNVVCWTAIIAA---CQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHT 447
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMG-LINLYAKCEKLDLASRVFSNIQL-PDLTAWSA 248
G ++ G + + K + +++L ++ +LD A R + + PD + W A
Sbjct: 448 GRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGA 507
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSE----------VTFSYVLGAFADVK---ETI 295
L+ ++ +K+F L P +T + +L +V+ E+I
Sbjct: 508 LLSACRNHSNLIMGKEVALKLFD--LEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESI 565
Query: 296 GGRQLHSLI-IKMGFSSFTFVANTVLDFYSK------------------CELLEESLKTF 336
G R+ I + S++ F + +K E ++ T
Sbjct: 566 GVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAINTA 625
Query: 337 DEMDEHDVV--SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
+E E + S +A L S G I + K++ G C + +++ + I +
Sbjct: 626 EEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREIIDS 685
Query: 395 IEWGKQ 400
+EWG +
Sbjct: 686 VEWGSR 691
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 214/703 (30%), Positives = 348/703 (49%), Gaps = 56/703 (7%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGM----------------- 56
NHL+ MY + + A +LF MP RN +SW+ L+SG SQ M
Sbjct: 60 NHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVA 119
Query: 57 ----------------------------PEVALNYFRLMVCCVLEPNYYTYVGAVS---A 85
P + + Y+ + P T V S +
Sbjct: 120 PTRLIYETKFHNTLGPKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQS 179
Query: 86 CASRGDARSGKEIHGRMYRSGLELNS-HVSNCLINMYGKCGLLSSAQFVFDASLERNSIS 144
C GD R G+ +H R+ SG S ++N LI MY C L+SA +F A RN++S
Sbjct: 180 CGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVS 239
Query: 145 WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF 204
W +L+S Q H L F R++GVA + F+ +S L ++ S
Sbjct: 240 WTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAA---RAAAALGAPLRARSCTA 296
Query: 205 KCALEFDK--FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEA 262
++ FD FVA L ++Y+KC L A RVF + D AW+A+I GYA+ G A
Sbjct: 297 SASVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAA 356
Query: 263 IDLFVKMFSSGLMPSEV-TFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
+ F M GL+ ++ F VL A +K+ + +H + K GF V N ++D
Sbjct: 357 VLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALID 416
Query: 322 FYSKCELLEESLKTFD-EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
Y+K +E + + + +VVS ++I G++ + EA+ + ++ +G PN +
Sbjct: 417 MYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEF 476
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T+S+++ + +E G Q H ++K + +GS LVDMY KCG ++ + ++F+ +
Sbjct: 477 TFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEI 536
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+ ++WN ++ +AQHG GREA++ + M + I+PN F+ +L+AC H GLV+EG
Sbjct: 537 EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGL 596
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKT 560
YF SM HGI P+ +H + ++ + G+ AY+FI PI+PN W LL C+
Sbjct: 597 KYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRM 656
Query: 561 HKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCS 620
LG AA+ ++ +P +T H+ LS +YA W++ VRK+M++ +KK G S
Sbjct: 657 RGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFS 716
Query: 621 WTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
W + K H F + ++ Q D++E + +L+ + + GY+PD
Sbjct: 717 WVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPD 759
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 254/569 (44%), Gaps = 89/569 (15%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLINMYGKCGLLSSAQFVFDASLERN 141
+ +C GD R G+ +H R+ SG S ++N LI MY C L+SA +F A RN
Sbjct: 27 LQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRN 86
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF----------------------- 178
++SW +L+S Q H L F R++GVA +
Sbjct: 87 AVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCHS 146
Query: 179 -------------------------SCASVLGACAVLGNLKVGMQIHS-LVFKCALEFDK 212
AS+L +C G+L+ G +H+ LV A
Sbjct: 147 GPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAAST 206
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
F+A LI +Y+ C L A R+F+ + + +W+ L+ G +Q +A+ F M +
Sbjct: 207 FLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRA 266
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G+ P+ S A A + + R + +GF + FVA+ + D YSKC LL E+
Sbjct: 267 GVAPTRFALSSAARAAAALGAPLRARSC-TASASVGFDTELFVASNLADMYSKCGLLSEA 325
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSD 391
+ FD+M + D V+W A+I G+ + A+ +DM EG + + + ++L+ S
Sbjct: 326 CRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGG 385
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD-HLSSKNLVSWNT 450
+ K HCC+ K GF+ V + +AL+DMYAK + A +V N+VS +
Sbjct: 386 LKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTS 445
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF-----NS 505
M+ GY + EAL IY ++ ++PN+ TF ++ C L+E+G
Sbjct: 446 MIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTD 505
Query: 506 MIRD------------------------HGISPRMDHIA--SVVHLFACRGQTR---RAY 536
+IRD + I R D IA +V+++FA G R +A+
Sbjct: 506 LIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTD-IAWNAVINVFAQHGHGREAIQAF 564
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
+ + S I PN + + LL+ C +H LV
Sbjct: 565 DRMIYSGIRPNHIAFVSLLTAC-SHAGLV 592
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 179/353 (50%), Gaps = 4/353 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + ++L MY K +++A ++FD+MP+++ ++W+A+I G+++ G E A+ F
Sbjct: 301 GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSF 360
Query: 65 RLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
R M ++ + + + +SA D K IH + ++G EL V N LI+MY K
Sbjct: 361 RDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAK 420
Query: 124 CGLLSSAQFVFDASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
+ SA V N +S S++ Y + L I++ R+ GV +EF+ +S
Sbjct: 421 SMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSS 480
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
++ CA+ L+ G Q+H+ V K L D FV L+++Y KC + L+ ++F+ I+
Sbjct: 481 MIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRT 540
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG-RQLH 301
AW+A+I +AQ G EAI F +M SG+ P+ + F +L A + G + +
Sbjct: 541 DIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFY 600
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
S+ G + ++D Y + L+E+ K EM + + W +L+
Sbjct: 601 SMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA 653
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 169/379 (44%), Gaps = 55/379 (14%)
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHS-LVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
A + AS+L +C G+L+ G +H+ LV A F+A LI +Y+ C L A
Sbjct: 16 AAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASA 75
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS----EVTFSYVLGA 287
R+F+ + + +W+ L+ G +Q +A+ F M +G+ P+ E F LG
Sbjct: 76 LRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGP 135
Query: 288 -------------------------------------FADVKETIG-------GRQLHS- 302
A + ++ G GR LH+
Sbjct: 136 KHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHAR 195
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
L++ ++ TF+AN ++ YS C L +L+ F M + VSW L++G + + +
Sbjct: 196 LVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHAD 255
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+ M G P + S+ ++ + A + GFD+ + + S L D
Sbjct: 256 ALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTAS-ASVGFDTELFVASNLAD 314
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG-LGREALEIYSMMQENKIKPNDN 481
MY+KCG L++A +VFD + K+ V+W M+ GYA++G L L M +E + + +
Sbjct: 315 MYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQH 374
Query: 482 TFIGVLSACVHIGLVEEGW 500
F VLSA G +++GW
Sbjct: 375 VFCSVLSAS---GGLKDGW 390
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 146/297 (49%), Gaps = 8/297 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEVALN 62
+GF V N L+ MY K + A ++ P NV+S +++I G+ + E AL
Sbjct: 402 AGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALV 461
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+ + +EPN +T+ + CA + G ++H ++ ++ L +S V + L++MYG
Sbjct: 462 IYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYG 521
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCGL+S + +F+ R I+W ++++ + Q G ++ F SG+ + + S
Sbjct: 522 KCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVS 581
Query: 183 VLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL- 240
+L AC+ G + G++ +S+ +E + +I+ Y + +LD A + S + +
Sbjct: 582 LLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIK 641
Query: 241 PDLTAWSALIG-----GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
P+ W +L+G G +LG+ + ++ ++G+ S LG + DVK
Sbjct: 642 PNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVK 698
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 196/638 (30%), Positives = 319/638 (50%), Gaps = 43/638 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G N N LL MY K + DA +LFD M N +S++A++ G +Q G + AL
Sbjct: 169 VKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDAL 228
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASR--GD------ARSGKEIHGRMYRSGLELNSHV 113
F M + + + ACA GD R + IH + R G + + HV
Sbjct: 229 RLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHV 288
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
N LI+MY K + A VF++ + +SW L++ Y Q G + L++ L ++SG
Sbjct: 289 GNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGF 348
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+E + +++L +C K + A
Sbjct: 349 EPNEVTYSNMLASCI-----------------------------------KARDVPSARA 373
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+F I P +T W+ L+ GY Q + I+LF +M + P T + +L + +
Sbjct: 374 MFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGI 433
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+Q+HS +K+ + FVA+ ++D YSKC + + F+ M E DVV WN++I+G
Sbjct: 434 LELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISG 493
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
EA + K M G P +Y++++N + + +I G+Q H ++K G+D N
Sbjct: 494 LAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQN 553
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V +GS+L+DMYAKCG ++DAR F+ + KN+V+WN M+ GYAQ+G G +A+E++ M
Sbjct: 554 VYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLT 613
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
K KP+ TFI VL+ C H GLV+E YFNSM ++GI P ++H ++ G+
Sbjct: 614 TKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFA 673
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
I P + + ++W LL+ C H + LG +AA+ + DP++ S +++LSN+YA
Sbjct: 674 EVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSPYVLLSNIYA 733
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+ + VR +M + + K G SW ++ F
Sbjct: 734 TLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGARAF 771
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 155/562 (27%), Positives = 277/562 (49%), Gaps = 51/562 (9%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
PNV +YN + + + A+ L MP+RN +SW+ +I+ ++ P AL +R
Sbjct: 73 RPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRG 132
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ L P +T +SAC + G+ HG + GL+ N V N L+ MY KCG
Sbjct: 133 MLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGS 192
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
++ A +FD N +S+ +++ Q G L++F +S + + + +SVLGA
Sbjct: 193 VADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGA 252
Query: 187 CA--------VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
CA V +++ IH+LV + + D+ V LI++YAK K+D A +VF ++
Sbjct: 253 CAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESM 312
Query: 239 QLPDLTAWSALIGGYAQLG---KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ +W+ L+ GY QLG +A E +DL M SG P+EVT+S +L + ++
Sbjct: 313 SSVSIVSWNILVTGYGQLGCYERALEVLDL---MQESGFEPNEVTYSNMLASCIKARDVP 369
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
R + I K +++ NT+L Y + EL +++++ F M +V
Sbjct: 370 SARAMFDKISKPSVTTW----NTLLSGYGQEELHQDTIELFRRMQHQNVQ---------- 415
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
P+ T + IL+ S + +E GKQ H VK +++
Sbjct: 416 ---------------------PDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMF 454
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ S L+DMY+KCG++ A+ +F+ ++ +++V WN+M+ G A H L EA + + M+EN
Sbjct: 455 VASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENG 514
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+ P ++++ ++++C + + +G +++D G + +S++ ++A G A
Sbjct: 515 MFPTESSYASMINSCARLSSIPQGRQIHAQVLKD-GYDQNVYVGSSLIDMYAKCGNMDDA 573
Query: 536 YEFIKSSPIEPNKVVWRCLLSG 557
F I N V W ++ G
Sbjct: 574 RLFFNCM-IVKNIVAWNEMIHG 594
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 142/523 (27%), Positives = 245/523 (46%), Gaps = 84/523 (16%)
Query: 47 LISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG 106
L+ +S G+P AL FR + PN Y+Y A+SA GD + +++ GRM
Sbjct: 51 LVELYSLSGLPCHALRAFRALP----RPNVYSYNAAISAACRAGDLAAARDLLGRMP--- 103
Query: 107 LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
+RN++SW +++++ + L+++
Sbjct: 104 --------------------------------DRNAVSWNTVIAAVARSDSPGEALEMYR 131
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
+ G+A + F+ ASVL AC + L G + H L K L+ ++FV GL+ +Y KC
Sbjct: 132 GMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCG 191
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
+ A R+F + P+ +++A++GG AQ G +A+ LF +M S + V S VLG
Sbjct: 192 SVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLG 251
Query: 287 AFA-------DVKETIG-GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE 338
A A +V I + +H+L+++ GF S V N+++D Y+K ++E++K F+
Sbjct: 252 ACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFES 311
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
M +VSWN L+ G+ Y A+E+L M G PN TYSN+L
Sbjct: 312 MSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNML------------ 359
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
CI K + AR +FD +S ++ +WNT+L GY Q
Sbjct: 360 ---ASCI--------------------KARDVPSARAMFDKISKPSVTTWNTLLSGYGQE 396
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
L ++ +E++ MQ ++P+ T +LS C +G++E G ++ ++ + M
Sbjct: 397 ELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLL-LHNDMFV 455
Query: 519 IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ ++ +++ GQ A + I + E + V W ++SG H
Sbjct: 456 ASGLIDMYSKCGQVGIA-QIIFNMMTERDVVCWNSMISGLAIH 497
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 220/465 (47%), Gaps = 47/465 (10%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + N L+ MY K ++++A K+F+ M +++SW+ L++G+ Q+G E A
Sbjct: 277 VVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERA 336
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L LM EPN TY +++C D
Sbjct: 337 LEVLDLMQESGFEPNEVTYSNMLASCIKARD----------------------------- 367
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ SA+ +FD + + +W +LLS Y Q H +++F + V +
Sbjct: 368 ------VPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTL 421
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L C+ LG L++G Q+HS K L D FVA GLI++Y+KC ++ +A +F+ +
Sbjct: 422 AVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTE 481
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+++I G A EA D F +M +G+ P+E +++ ++ + A + GRQ+
Sbjct: 482 RDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQI 541
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++K G+ +V ++++D Y+KC ++++ F+ M ++V+WN +I G+ +
Sbjct: 542 HAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFG 601
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--- 417
+A+EL + ML P+ T+ +L S G +SN I
Sbjct: 602 EKAVELFEYMLTTKQKPDSVTFIAVLTGCS-----HSGLVDEAIAYFNSMESNYGIRPLV 656
Query: 418 ---SALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH 458
+ L+D + GR + V D + K + + W +L H
Sbjct: 657 EHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVH 701
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 194/395 (49%), Gaps = 13/395 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M SGF PN +TY+++L +K + A+ +FD++ + +V +W+ L+SG+ Q + +
Sbjct: 343 MQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDT 402
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ FR M ++P+ T +S C+ G GK++H + L + V++ LI+M
Sbjct: 403 IELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDM 462
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + AQ +F+ ER+ + W S++S + F R++G+ +E S
Sbjct: 463 YSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSY 522
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS++ +CA L ++ G QIH+ V K + + +V LI++YAKC +D A F+ + +
Sbjct: 523 ASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIV 582
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD---VKETIGG 297
++ AW+ +I GYAQ G +A++LF M ++ P VTF VL + V E I
Sbjct: 583 KNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIA- 641
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLA 356
+S+ G ++D + E + D+M + D + W L LA
Sbjct: 642 -YFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVL----LA 696
Query: 357 SC---HYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+C H E E LF N Y + NI
Sbjct: 697 ACVVHHNAELGEFAAKHLFRLDPKNPSPYVLLSNI 731
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 169/385 (43%), Gaps = 75/385 (19%)
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTF--------------------------- 336
++ G ++ TF+ N +++ YS L +L+ F
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAA 95
Query: 337 ----DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
M + + VSWN +IA S GEA+E+ + ML EG P +T +++L+ +
Sbjct: 96 RDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAV 155
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
A++ G++ H VK G D N + + L+ MY KCG + DA ++FD +SS N VS+ M+
Sbjct: 156 AALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMM 215
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC-------------------VHI 493
G AQ G +AL +++ M + I+ + VL AC +H
Sbjct: 216 GGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHA 275
Query: 494 GLVEEGW----HYFNSMIRDHGISPRMDHIASVVH------------------LFACRGQ 531
+V +G+ H NS+I + +MD V C +
Sbjct: 276 LVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYER 335
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
+ ++ S EPN+V + +L+ C +D+ R +KI + P T+ + +LS
Sbjct: 336 ALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKI--SKPSVTTWNTLLSG- 392
Query: 592 YAEANMWDETAKVRKIMKEKSLKKD 616
Y + + +T ++ + M+ ++++ D
Sbjct: 393 YGQEELHQDTIELFRRMQHQNVQPD 417
>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
Length = 703
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 205/595 (34%), Positives = 328/595 (55%), Gaps = 10/595 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G ++I N L+ MY + SR++ A+ +FD++ ++V+SW+A+I+ ++ G E AL
Sbjct: 114 LARGLSSSIIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQAL 173
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARS-GKEIHGRMYRSGLELNSHVSNCLINM 120
F+ M LEPN T+ +AC+ D R GK IH R+ S LE N V+ ++ M
Sbjct: 174 QLFKRME---LEPNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTM 230
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGK G + A+ VF+ +N +SW ++L +Y Q L+++ V E +
Sbjct: 231 YGKFGKVGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTV 290
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
LG A L LK+G+++H L + + V LI++Y KC +LD A RVFS ++
Sbjct: 291 VIALGISASLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRA 350
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+ALI Y Q G+ EA++L+ +M G+ P +VTF+ VL A ++ + G+ L
Sbjct: 351 HDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQAL 410
Query: 301 HSLII--KMGFSSFTFVANTVLDFYSKCELLEESLKTFDE-MDEHDVVSWNALIAGHLAS 357
H+ ++ K GFS VA +++ Y KC L+ S + F D VV WNA+I +
Sbjct: 411 HARLLARKDGFSDGVLVA-ALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQE 469
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVI 416
+ A++L M G P+ T S+IL+ +++ +E G+Q H I+ N V+
Sbjct: 470 GYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVV 529
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+AL+ MYA CG + +A+ VF + ++++VSW ++ Y Q G R AL +Y M +
Sbjct: 530 LNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGV 589
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
+P + TF+ V AC H GLV+E YF SMI D I+P DH + VV + + G+ A
Sbjct: 590 QPTEPTFLCVFLACGHAGLVDECKWYFQSMIEDR-ITPTFDHYSCVVTVLSRAGKLEEAE 648
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
+ + S P P V W LL C+TH DL R AA++ + D +D++ +++LSNV
Sbjct: 649 DLLHSMPFNPGSVGWTSLLGACRTHGDLKRARRAADEAMELDRQDSAPYVLLSNV 703
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 171/561 (30%), Positives = 302/561 (53%), Gaps = 9/561 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG + +HLL MY K ++DA ++F +P R++ SW+ +I+ F++ A
Sbjct: 12 IVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAFAKNRHGRKA 71
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ FR M ++P+ T + AC+S D GK+IH R GL + V N L++M
Sbjct: 72 IEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSIIVQNALVSM 131
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +C L A+ VFD ++ +SW +++++ + GE L++F ++ + +E +
Sbjct: 132 YARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLF---KRMELEPNEVTF 188
Query: 181 ASVLGACAVLGNLK-VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
ASV AC++L + + VG +IH + LE + VA ++ +Y K K+ +A +VF+ IQ
Sbjct: 189 ASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQ 248
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+A++G Y Q EA++++ +M + + EVT LG A ++ G +
Sbjct: 249 HKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISASLRLLKLGIE 308
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH L + G+ S V N ++ Y KC L+ + + F ++ HDVVSW ALI +
Sbjct: 309 LHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGR 368
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV--KPGFDSNVVIG 417
EA+EL K M EG P+ T++++L+ S+ +E G+ H ++ K GF V++
Sbjct: 369 NREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDGFSDGVLV- 427
Query: 418 SALVDMYAKCGRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+AL++MY KCGRL+ + ++F +K +V WN M+ Y Q G R A+++Y MM++ +
Sbjct: 428 AALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGL 487
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P+++T +LSAC + +E+G +I S + +++ ++A G+ R A
Sbjct: 488 DPDESTLSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYASCGEIREAK 547
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
K + V W L+S
Sbjct: 548 AVFKRMK-NRDVVSWTILISA 567
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 262/501 (52%), Gaps = 12/501 (2%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
G+ IH + SGL + + + L+ MYGKCG + A VF + R+ SW +++++ +
Sbjct: 5 GRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAFAK 64
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
+++F +G+ + +SVLGAC+ L +L+ G +IHS L V
Sbjct: 65 NRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSIIV 124
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
L+++YA+C +LD+A VF I+ + +W+A+I A+ G+A +A+ LF +M L
Sbjct: 125 QNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM---EL 181
Query: 275 MPSEVTFSYVLGA---FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
P+EVTF+ V A D +E G+++H I + VA ++ Y K +
Sbjct: 182 EPNEVTFASVFNACSLLPDHREV--GKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGM 239
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+ + F+ + +VVSWNA++ + + EA+E+ +M+ + + T L IS+
Sbjct: 240 ARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISAS 299
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ ++ G + H V G+DSN+ + +AL+ MY KC L+ AR+VF + + ++VSW +
Sbjct: 300 LRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTAL 359
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI-RDH 510
+V Y QHG REALE+Y M+ ++P+ TF VLSAC + +E G ++ R
Sbjct: 360 IVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKD 419
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKT--HKDLVLGR 568
G S + +A++++++ G+ + E +S VVW +++ + + +
Sbjct: 420 GFSDGV-LVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDL 478
Query: 569 YAAEKILSTDPEDTSAHIMLS 589
Y K DP++++ +LS
Sbjct: 479 YDMMKQRGLDPDESTLSSILS 499
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 236/494 (47%), Gaps = 47/494 (9%)
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L G +IH+ + L D F+ L+ +Y KC +D A +VF ++ L +W+ +I
Sbjct: 2 LPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAA 61
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
+A+ +AI++F M S+G+ P T S VLGA + +++ G+++HS + G SS
Sbjct: 62 FAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSS 121
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V N ++ Y++C L+ + FD+++ VVSWNA+IA +A++L K M
Sbjct: 122 IIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRMEL 181
Query: 373 EGHCPNLYTYSNILNISSDIPA-IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
E PN T++++ N S +P E GK+ H I ++NV + +A+V MY K G++
Sbjct: 182 E---PNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVG 238
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
AR+VF+ + KN+VSWN ML Y Q+ L REALE+Y M K++ ++ T + L
Sbjct: 239 MARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISA 298
Query: 492 HIGLVEEGWHYF---------------NSMIRDHGISPRMDHIASV-------------- 522
+ L++ G N++I +G +D V
Sbjct: 299 SLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTA 358
Query: 523 -VHLFACRGQTRRAYEFIKS---SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD 578
+ + G+ R A E K +EP+KV + +LS C DL LG+ ++L+
Sbjct: 359 LIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARK 418
Query: 579 P--EDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRF 636
D L N+Y + D ++++ + K+ W + SR
Sbjct: 419 DGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTK----AVVVWNAMITAYEQEGYSRA 474
Query: 637 AQFQGIDLHEVMNQ 650
A +DL+++M Q
Sbjct: 475 A----VDLYDMMKQ 484
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 32/201 (15%)
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
A+ G++ H IV G S+ +G L+ MY KCG ++DA +VF L ++L SWN ++
Sbjct: 1 ALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIA 60
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF---------- 503
+A++ GR+A+E++ M IKP+ T VL AC + +EEG
Sbjct: 61 AFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSS 120
Query: 504 -----NSMIRDHGISPRMDHIASVVH--------------LFAC--RGQTRRAYEFIKSS 542
N+++ + R+D +A VV + AC +G+ +A + K
Sbjct: 121 SIIVQNALVSMYARCSRLD-VARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM 179
Query: 543 PIEPNKVVWRCLLSGCKTHKD 563
+EPN+V + + + C D
Sbjct: 180 ELEPNEVTFASVFNACSLLPD 200
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/485 (35%), Positives = 269/485 (55%), Gaps = 1/485 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S++ ACA NL IHS + + L D F+ LI++Y KC + A VF I
Sbjct: 67 SIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTR 126
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W+ LI GYAQ EA+ L M + PS TF+ L A G Q+H
Sbjct: 127 DVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMH 186
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+L +K +V + +LD Y++C+ ++ +++ FD +D + VSWNALIAG
Sbjct: 187 ALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGE 246
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+ +M G +TYS++ + + I A+E G+ H ++K G + + ++
Sbjct: 247 TTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTIL 306
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
MYAK G + DARKVFD + ++LV+WNTML +AQ+GLG+EA+ + +++ I+ N
Sbjct: 307 GMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQI 366
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL+AC H GLV+EG YF+ M++D+ + P +DH S V L G + A F+
Sbjct: 367 TFLSVLTACSHGGLVKEGKQYFD-MMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFK 425
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P+EP VW LL C+ HK+ +G+YAA+ + DPEDT ++L N+YA WD+
Sbjct: 426 MPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDA 485
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A+VRK+MK +KK+ CSW E++N +H F + +++ + +++ + GYV
Sbjct: 486 ARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYV 545
Query: 662 PDPIY 666
P+ Y
Sbjct: 546 PNTDY 550
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 189/381 (49%), Gaps = 14/381 (3%)
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L L++ L P Y ++ACA + + IH + RS L + + N LI+
Sbjct: 46 GLRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIH 105
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG +S A+ VFD R+ +SW L++ Y Q L + ++ S F+
Sbjct: 106 MYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFT 165
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S L A G +G Q+H+L K L+ D +V L+++YA+C+++D+A RVF +
Sbjct: 166 FTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLD 225
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+ALI G+A+ G + F +M +G + T+S V A A + GR
Sbjct: 226 SKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRW 285
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ +IK G FVANT+L Y+K + ++ K FD +D+ D+V+WN ++ A
Sbjct: 286 VHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLT---AFAQ 342
Query: 360 YG---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI----VKPGFDS 412
YG EA+ +++ G N T+ ++L S ++ GKQ + V+P D
Sbjct: 343 YGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDH 402
Query: 413 NVVIGSALVDMYAKCGRLNDA 433
V + VD+ + G L +A
Sbjct: 403 YV----SFVDLLGRAGLLKEA 419
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 172/344 (50%), Gaps = 7/344 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ MY K ++DA+ +FD +P R+V+SW+ LI+G++Q MP AL M+
Sbjct: 101 NSLIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFR 160
Query: 74 PNYYTYVG---AVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
P+ +T+ A AC RG G+++H + L+ + +V + L++MY +C + A
Sbjct: 161 PSGFTFTSFLKAAGACGGRG---IGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMA 217
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
VFD +N +SW +L++ + + G+ L F +++G + F+ +SV A A +
Sbjct: 218 IRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARI 277
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G L+ G +H+ + K + FVA ++ +YAK + A +VF + DL W+ ++
Sbjct: 278 GALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTML 337
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
+AQ G EA+ F ++ G+ +++TF VL A + G+Q ++
Sbjct: 338 TAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVE 397
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
+ +D + LL+E+L +M E W AL+
Sbjct: 398 PEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 441
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 126/240 (52%)
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
+ + L P+ + ++ A A K G R +HS + + + F+ N+++ Y KC
Sbjct: 53 LLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGA 112
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+ ++ FD + DVVSW LI G+ + EA+ LL DML P+ +T+++ L
Sbjct: 113 VSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKA 172
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ G+Q H VK D +V +GSAL+DMYA+C +++ A +VFD L SKN VSW
Sbjct: 173 AGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSW 232
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
N ++ G+A+ G G L ++ MQ N T+ V SA IG +E+G MI+
Sbjct: 233 NALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIK 292
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 41/237 (17%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI SG N +L MY K + DA+K+FD + +R++++W+ +++ F+Q G+ + A
Sbjct: 290 MIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEA 349
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM--YRSGLELNSHVSNCLI 118
+ +F + ++ N T++ ++AC+ G + GK+ M Y E++ +VS +
Sbjct: 350 VAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVS--FV 407
Query: 119 NMYGKCGLLSSAQ-FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
++ G+ GLL A FVF +E + W +L
Sbjct: 408 DLLGRAGLLKEALIFVFKMPMEPTAAVWGAL----------------------------- 438
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
LGAC + N K+G VF+ E D + L N+YA + D A+RV
Sbjct: 439 ------LGACRMHKNAKIGQYAADHVFELDPE-DTGPPVLLYNIYASTGQWDDAARV 488
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/597 (30%), Positives = 317/597 (53%), Gaps = 7/597 (1%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A+K+FD M + I W+ +I G++ P AL FR M + P+ YT + A+
Sbjct: 72 ARKVFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAA 131
Query: 89 ----RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSIS 144
+G A +G +H + R G + V + LIN YG + A+ VF+ ER+ +S
Sbjct: 132 FASWKGRA-TGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVS 190
Query: 145 WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF 204
W ++S++ QCG+ + L+ + G ++ + S+L AC + + G+ +++ V
Sbjct: 191 WTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVD 250
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
+ +E D + LI +Y KC + A + F + + + +W+ LI G+ Q GK EA+
Sbjct: 251 EYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALT 310
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
+F +M S G++P +T VL +A + + GR LH+ I + N++++ Y+
Sbjct: 311 MFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYA 370
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
KC + + F+ M D+VSW A++ G++ + A L DM + +
Sbjct: 371 KCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVS 430
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
+L+ S + A++ G++ H I + +++ + SALVDMYAKCG ++ A ++F + K
Sbjct: 431 LLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQ 490
Query: 445 LVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
++WN M+ G A G G+EA+ ++ +++ KP+ T VL AC H+G+V+EG HYF
Sbjct: 491 TLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYF 550
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
N M+ GI P +H +V L G AY FI+ PI+PN V+W LL+ C+ H
Sbjct: 551 NLML-TLGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHR 609
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCS 620
+ LG+ + I+ P D AH+++SN++AE WD+ +VR +M + ++K G S
Sbjct: 610 MELGKIIGQHIIDLAPNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHS 666
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 228/480 (47%), Gaps = 8/480 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF ++ + L+ Y + DA+K+F+EM ER+V+SW+ +IS F+Q G + L
Sbjct: 152 GFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSL 211
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M +PN T + +SAC G ++ R+ G+E + + N LI MY KC
Sbjct: 212 DEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKC 271
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G +S A F RN+ SW +L+ + Q G+H L +F GV + SVL
Sbjct: 272 GCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVL 331
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A LG+L+ G +H+ + + D + LIN+YAKC + A +F N+ D+
Sbjct: 332 STYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIV 391
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+A++ GY + + A +LF M +M SE+ +L A + + GR++HS I
Sbjct: 392 SWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYI 451
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+ + ++ + ++D Y+KC ++ + + F M ++WNA+I G + EA+
Sbjct: 452 KEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAV 511
Query: 365 ELLKDML-FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
L + +L P+ T +L + + ++ G ++ G + +VD+
Sbjct: 512 ALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTLGIVPDNEHYGCIVDL 571
Query: 424 YAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK--PND 480
+ G L++A + N V W ++L H +E+ ++ ++ I PND
Sbjct: 572 LGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVH----HRMELGKIIGQHIIDLAPND 627
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/628 (31%), Positives = 322/628 (51%), Gaps = 3/628 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + + LL Y + A+++ DE P + ++ + + G A
Sbjct: 51 LLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAAGRHAEA 110
Query: 61 LNYFRLMV--CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
+ R M C + + A+ A D G+ +H + ++G + V N L+
Sbjct: 111 VAVHRDMRRRCPAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAGGG-DLFVMNNLV 169
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+MY K G L +A+ VFD +RN +SW S+LS Q G GL +F R+ + SE+
Sbjct: 170 DMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEY 229
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ ASVL AC +LG+L G IH V K L + F+ ++++Y KC + + A +VF +
Sbjct: 230 TMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDEL 289
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
DL W+ +I GY Q G +A+ LFV ++P+ VT + VL A A ++ GR
Sbjct: 290 SFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGR 349
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H + +K+G V N ++D Y+KC+ L ++ F + DVV+WN+LIAG+ +
Sbjct: 350 SIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAEND 409
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+A+ L M +G P+ + N L+ + + GK H VK F SN+ + +
Sbjct: 410 MGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNT 469
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+++Y KC L A++VF ++ +N V+W M+ GY G ++++++ M ++ I+P
Sbjct: 470 ALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQP 529
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N+ F +LS C H G+V G F SM I+P M H A +V + A G A EF
Sbjct: 530 NEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEF 589
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I+ P++ + +W+ L GCK H L A +++ P+ +M+SN+Y W
Sbjct: 590 IQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCVMMSNLYTSYGRW 649
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQN 626
D++ +RK+MKE+ L K GCS L+N
Sbjct: 650 DKSLAIRKLMKERGLVKLPGCSSVGLEN 677
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 130/264 (49%), Gaps = 9/264 (3%)
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
R LH+ ++ G +L Y+ L + + DE D ++ + H A+
Sbjct: 45 RALHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAA 104
Query: 358 CHYGEAIELLKDMLFEGHCP----NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ EA+ + +DM CP ++ S L + +G++ HC +VK G +
Sbjct: 105 GRHAEAVAVHRDM--RRRCPAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAG-GGD 161
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ + + LVDMYAK G L +ARKVFD + +N+VSW +ML G Q+GL +E L +++ M++
Sbjct: 162 LFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQ 221
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
I P++ T VL AC +G + +G S+++ HG+ A+++ ++ G+
Sbjct: 222 ESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMK-HGLVSNHFITAAMLDMYVKCGEAE 280
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSG 557
A + + V+W ++ G
Sbjct: 281 DARQVFDELSFV-DLVLWTTMIVG 303
>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 205/669 (30%), Positives = 352/669 (52%), Gaps = 19/669 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM- 67
N + LL Y K ++ A+K F E + + W+A++ GF G E F M
Sbjct: 151 NGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMR 210
Query: 68 -VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL--ELNSHVSNCLINMYGKC 124
+ LE N ++ + A + D R G+++ G + GL + H++N L+NMY +C
Sbjct: 211 GLGLGLELNEFSLTSVLGALS---DVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRC 267
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G S A +FD E + +SW + + + + ++F L + ++E+ +VL
Sbjct: 268 GSKSDAIKMFDEMTEPDVVSWTERIGA---AYDAIEAFELFRLVLSGNMEVNEYMLINVL 324
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A LK G QI L K V LI +Y KC ++ A +F + D
Sbjct: 325 SAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSV 384
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W++LI GYA+ G +A+ +F +M L P++ T + +L A+ Q+HS I
Sbjct: 385 SWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYI 444
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL-ASCHYGEA 363
+K+GF + + ++ Y KC ++ ES + + ++ + +V+ NA+ A + A CH +A
Sbjct: 445 VKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCH-ADA 503
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
++L + + T S +L + +E+G+ H +K G + + SA++D+
Sbjct: 504 LKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDV 563
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y KCG +++A K F ++S NLV+WN M++GYAQHG E E+++ M E I+P++ T+
Sbjct: 564 YCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITY 623
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+GVL++C H GLV E Y +SM+ HG+ P ++H A ++ LF G A I P
Sbjct: 624 LGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMP 683
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
I P+ +W+ LLSGC H ++ LG AA+K++ PE+ SA+++LSN+YA A W+ K
Sbjct: 684 IMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGK 743
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP- 662
+R++MK+K + K+ G SW +++ +HYF S + + +++ + +L +F Y+
Sbjct: 744 LRRVMKKKIICKEPGSSWIQVRGSVHYFFASDTSHPESKEIYMKLQRLYEEMFASPYLEQ 803
Query: 663 ------DPI 665
DPI
Sbjct: 804 DRPVNYDPI 812
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 225/435 (51%), Gaps = 16/435 (3%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ-FVFDAS 137
Y A+ A AS + + +SG L++ +S+ ++N + G + A+ F+ D
Sbjct: 23 YPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTP 82
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+++SW SL+S Y + + +F R+SG++ EFS +S++ C VL +V
Sbjct: 83 YP-DTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVA- 140
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
H + K L + FV GL++ YAK +D A + F + D W+A++ G+ G
Sbjct: 141 --HGVCLKMGL-LNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNG 197
Query: 258 KACEAIDLFVKM--FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF--SSFT 313
+ + ++FV+M GL +E + + VLGA +DV+E G Q+ L +KMG
Sbjct: 198 EFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDVRE---GEQVFGLSVKMGLLCGCSI 254
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ N +++ YS+C +++K FDEM E DVVSW I A+ EA EL + +L
Sbjct: 255 HLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIG---AAYDAIEAFELFRLVLSG 311
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
N Y N+L+ + ++ G+Q K G+ + +AL+ MY KCG + A
Sbjct: 312 NMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAA 371
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
R +FD + + VSWN+++ GYA++GL ++AL+++S M++ ++PN T +L +
Sbjct: 372 RHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANS 431
Query: 494 GLVEEGWHYFNSMIR 508
E+ + +++
Sbjct: 432 NFPEQAMQIHSYIVK 446
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 151/572 (26%), Positives = 267/572 (46%), Gaps = 32/572 (5%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SGF + + ++ + A++ + P + +SW++LISG+++ P
Sbjct: 47 LKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVF 106
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F + L P+ ++ V C G + HG + GL LN V + L++ Y
Sbjct: 107 DLFNGLRRSGLSPDEFSLSSLVKGC---GVLEQNEVAHGVCLKMGL-LNGFVVSGLLDGY 162
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA--ISEFS 179
K G + SA+ F +S+ W +++ + GE G ++F+ R G+ ++EFS
Sbjct: 163 AKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFS 222
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFK------CALEFDKFVAMGLINLYAKCEKLDLASR 233
SVLGA L +++ G Q+ L K C++ + L+N+Y++C A +
Sbjct: 223 LTSVLGA---LSDVREGEQVFGLSVKMGLLCGCSIHLNN----ALMNMYSRCGSKSDAIK 275
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+F + PD+ +W+ IG A EA +LF + S + +E VL A + K
Sbjct: 276 MFDEMTEPDVVSWTERIGAAYD---AIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKL 332
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
GRQ+ L K G+ V N ++ Y KC + + FDEM D VSWN+LIAG
Sbjct: 333 LKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAG 392
Query: 354 HLASCHYGEAIEL---LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
+ + +A+++ ++D L + PN YT ++IL ++++ E Q H IVK GF
Sbjct: 393 YAENGLMKQALKVFSQMRDYLLQ---PNKYTLASILEVAANSNFPEQAMQIHSYIVKLGF 449
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
+ + S L+ Y KC + ++++V+ +S N++ N M G +AL+++
Sbjct: 450 IVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQT 509
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF-ACR 529
+ + T VL AC + +E G + +SM G+S ++V+ ++ C
Sbjct: 510 GWRLHQEVDCITLSIVLKACGALTDLEYGRN-IHSMALKSGMSQDNFVESAVIDVYCKCG 568
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
A F+ S + N V W ++ G H
Sbjct: 569 TVDEAAKTFMNVS--KNNLVAWNAMVMGYAQH 598
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 83/166 (50%), Gaps = 15/166 (9%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG + + ++ +Y K +++A K F + + N+++W+A++ G++Q G
Sbjct: 546 LKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVF 605
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS-----NC 116
F M+ ++P+ TY+G +++C G E H + S LEL+ V C
Sbjct: 606 ELFNKMLELGIQPDEITYLGVLNSCCHAGLV---NEAHTYL-SSMLELHGVVPCLEHYAC 661
Query: 117 LINMYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHG 161
+I+++G+ GLL A+ D + ++ W LLS G ++HG
Sbjct: 662 MIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLS-----GCNIHG 702
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y L S+ + Q++ +K GF + + S +V+ +A G AR+
Sbjct: 23 YPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTP 82
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
+ VSWN+++ GYA+ ++++ ++ + + P++ + ++ C G++E+
Sbjct: 83 YPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGC---GVLEQ--- 136
Query: 502 YFNSMIRDHGISPRMDH-----IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
N + HG+ +M ++ ++ +A G A + K I + VVW ++
Sbjct: 137 --NEVA--HGVCLKMGLLNGFVVSGLLDGYAKLGDVDSAEKCFKEFYI-ADSVVWTAMVC 191
Query: 557 GCKTHKDLVLGR 568
G + + GR
Sbjct: 192 GFVWNGEFEKGR 203
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/562 (31%), Positives = 312/562 (55%), Gaps = 5/562 (0%)
Query: 105 SGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKI 164
SG LN SN LI+MY KC A VFD+ ERN +SW +L+S + G+ L +
Sbjct: 398 SGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSL 457
Query: 165 FLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK 224
F + G+ +EF+ ++ L AC +L L+ G+QIH K E V L+++Y+K
Sbjct: 458 FTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 517
Query: 225 CEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL--MPSEVTFS 282
C +++ A +VF + L +W+A+I GY G A+ F M + + P E T +
Sbjct: 518 CGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGF--SSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
+L A + G+Q+H +++ GF S + +++D Y KC L + K FD++
Sbjct: 578 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIK 637
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
E ++SW++LI G+ + EA+ L K + + + S+I+ + +D ++ GKQ
Sbjct: 638 EKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQ 697
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
+VK + ++LVDMY KCG +++A K F + K+++SW M+ GY +HGL
Sbjct: 698 MQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGL 757
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
G++A+ I++ M + I+P++ ++ VLSAC H G+++EG F+ ++ GI PR++H A
Sbjct: 758 GKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYA 817
Query: 521 SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE 580
VV L G+ + A + + PI+PN +W+ LLS C+ H D+ LG+ + +L D +
Sbjct: 818 CVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGK 877
Query: 581 DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQ 640
+ + ++M+SN+Y +A W+E R++ K L+K+ G SW E++ ++H+F + +
Sbjct: 878 NPANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPL 937
Query: 641 GIDLHEVMNQLSVHLFDG-GYV 661
+ + E + ++ L + GYV
Sbjct: 938 TLVIQETLKEVERRLREELGYV 959
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 241/473 (50%), Gaps = 9/473 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG N+IT N+L+ MY K A K+FD MPERNV+SW+AL+SG G +L+
Sbjct: 398 SGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSL 457
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F M + PN +T+ + AC G +IHG + G E+ V N L++MY K
Sbjct: 458 FTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 517
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA--ISEFSCA 181
CG ++ A+ VF + R+ ISW ++++ Y G L F + +++ + EF+
Sbjct: 518 CGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALE--FDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L AC+ G + G QIH + + + L++LY KC L A + F I+
Sbjct: 578 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIK 637
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +WS+LI GYAQ G EA+ LF ++ S ++G FAD G+Q
Sbjct: 638 EKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQ 697
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+ +L++K+ T V+N+++D Y KC L++E+ K F EM DV+SW +I G+
Sbjct: 698 MQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGL 757
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
+A+ + ML P+ Y +L+ S I+ G++ +++ G V +
Sbjct: 758 GKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYA 817
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG---LGREALEI 467
+VD+ + GRL +A+ + D + K N+ W T+L HG LG+E +I
Sbjct: 818 CVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKI 870
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 308/573 (53%), Gaps = 36/573 (6%)
Query: 92 ARSGKEIHGR-MYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
A+SG+ H R ++ + ++ N ++++Y K GL+ + +FD R+S+S+ +++S
Sbjct: 69 AKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVIS 128
Query: 151 SYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF 210
+ G L +FL +K G+ +E++ SVL AC L +L+ G QIH + C L
Sbjct: 129 GFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGG 188
Query: 211 DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF 270
+ FV L +LYA+C ++D A R+F + + ++ W+ +I GY + + + IDLF +M
Sbjct: 189 NVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQ 248
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
S L P +VT S VLGA+ I+ G+ ++
Sbjct: 249 VSNLKPDQVTASSVLGAY----------------IQAGY-------------------ID 273
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
E+ K F E+ E D V W +I G + +A+ L +ML E P+ YT S++++ +
Sbjct: 274 EARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCA 333
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
+ ++ G+ H G + ++++ SALVDMY KCG DA +F + ++N+VSWN+
Sbjct: 334 KLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNS 393
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
M+ GYA +G EAL +Y M E +KP+ TF+GVLSACVH GLVEEG YF SM H
Sbjct: 394 MIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQH 453
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYA 570
G+ P DH A +V+LF G +A + I S EPN ++W +LS C D+ G A
Sbjct: 454 GLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMA 513
Query: 571 AEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHY 630
A ++ +P + +IMLSN+YA W + A +R +MK K +KK + SW E+ N++H
Sbjct: 514 ARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHK 573
Query: 631 FSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
F +H +N+L L + G+ P+
Sbjct: 574 FVADDRTHPDAKIIHVQLNRLIRKLQEAGFSPN 606
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 212/443 (47%), Gaps = 37/443 (8%)
Query: 12 TYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
++N +L +Y K + D + +FD MP R+ +S++ +ISGF+ G AL F M
Sbjct: 91 SWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEG 150
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L+P YT+V ++AC D R GK+IHGR+ L N V N L ++Y +CG + A+
Sbjct: 151 LKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQAR 210
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
+FD + RN ++W ++S Y + + + +F + S + + + +SVLGA
Sbjct: 211 RLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA----- 265
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
Y + +D A +VF I+ D W+ +I
Sbjct: 266 ------------------------------YIQAGYIDEARKVFGEIREKDEVCWTIMIV 295
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G AQ GK +A+ LF +M P T S V+ + A + G+ +H MG +
Sbjct: 296 GCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVND 355
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V++ ++D Y KC + ++ F M +VVSWN++I G+ + EA+ L ++ML
Sbjct: 356 DLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENML 415
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV-KPGFDSNVVIGSALVDMYAKCGRL 430
E P+ T+ +L+ +E GK+ C + + G + + +V+++ + G +
Sbjct: 416 EENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHM 475
Query: 431 NDARKVFDHLSSK-NLVSWNTML 452
+ A + +S + N + W T+L
Sbjct: 476 DKAVDLISSMSQEPNSLIWTTVL 498
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 186/437 (42%), Gaps = 69/437 (15%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
NV N L +Y + I+ A++LFD M RNV++W+ +ISG+ + PE ++ F M
Sbjct: 189 NVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQ 248
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
L+P+ T ++ ++ Y + G +
Sbjct: 249 VSNLKPDQVT-----------------------------------ASSVLGAYIQAGYID 273
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ VF E++ + W ++ Q G+ L +F ++ +SV+ +CA
Sbjct: 274 EARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCA 333
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L +L G +H F + D V+ L+++Y KC A +FS +Q ++ +W++
Sbjct: 334 KLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNS 393
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+IGGYA G+ EA+ L+ M L P VTF VL A +H+ +++ G
Sbjct: 394 MIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSAC-----------VHAGLVEEG 442
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F C + ++ + +H + ++ S H +A++L+
Sbjct: 443 KEYF-------------CSMSDQ--HGLEPTPDH----YACMVNLFGRSGHMDKAVDLIS 483
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M E PN ++ +L++ I+ G+ C+++ N V L +MYA G
Sbjct: 484 SMSQE---PNSLIWTTVLSVCVMKGDIKHGEMAARCLIELN-PFNAVPYIMLSNMYAARG 539
Query: 429 RLNDARKVFDHLSSKNL 445
R D + + SK++
Sbjct: 540 RWKDVASIRSLMKSKHV 556
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 31/225 (13%)
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL---------------------- 350
TF+ N +L+ Y+K + + K FDEM + D SWNA+
Sbjct: 58 TFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPS 117
Query: 351 ---------IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
I+G + G A+ + M EG P YT+ ++LN + + + GKQ
Sbjct: 118 RDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQI 177
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H I+ NV + +AL D+YA+CG ++ AR++FD + +N+V+WN M+ GY ++
Sbjct: 178 HGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQP 237
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
+ ++++ MQ + +KP+ T VL A + G ++E F +
Sbjct: 238 EKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEI 282
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 126/252 (50%), Gaps = 2/252 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M S P+ +T + +L Y++ I++A+K+F E+ E++ + W+ +I G +Q G E A
Sbjct: 247 MQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDA 306
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ P+ YT VS+CA G+ +HG+ + G+ + VS+ L++M
Sbjct: 307 LLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDM 366
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG+ A +F RN +SW S++ Y G+ + L ++ + + +
Sbjct: 367 YCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTF 426
Query: 181 ASVLGACAVLGNLKVGMQIH-SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI- 238
VL AC G ++ G + S+ + LE ++NL+ + +D A + S++
Sbjct: 427 VGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMS 486
Query: 239 QLPDLTAWSALI 250
Q P+ W+ ++
Sbjct: 487 QEPNSLIWTTVL 498
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 111/254 (43%), Gaps = 44/254 (17%)
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL- 460
H + KP ++ I + L+++YAK G ++ ARK+FD ++ ++ SWN ML YA+ GL
Sbjct: 49 HLHLFKP---NDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLV 105
Query: 461 ------------------------------GREALEIYSMMQENKIKPNDNTFIGVLSAC 490
G AL ++ MQ+ +KP + T + VL+AC
Sbjct: 106 EDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNAC 165
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
+ + G +I + + + ++ L+A G+ +A I N V
Sbjct: 166 TQLLDLRRGKQIHGRIIICN-LGGNVFVCNALTDLYARCGEIDQARRLFDRMVIR-NVVT 223
Query: 551 WRCLLSGCKTHK--DLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
W ++SG ++ + + + ++ + P+ +A +L Y +A DE KV +
Sbjct: 224 WNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLG-AYIQAGYIDEARKVFGEI 282
Query: 609 KEKSLKKDTGCSWT 622
+E KD C WT
Sbjct: 283 RE----KDEVC-WT 291
>gi|147818972|emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
Length = 1817
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/509 (34%), Positives = 298/509 (58%), Gaps = 4/509 (0%)
Query: 161 GLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLIN 220
L+ F SG ++F + L +CA L N +G+QIH+ + + E + F+ L++
Sbjct: 1300 ALESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALVD 1359
Query: 221 LYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVT 280
LYAKC+ + A RVF ++ D +W+++I G+++ G+ EAI F +M S + P+ VT
Sbjct: 1360 LYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVT 1419
Query: 281 FSYVLGAFADVKETIGGR--QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE 338
+ + A + ETI + LH+ ++K+GF TFV + ++D YSKC +++++ F
Sbjct: 1420 YVSXISACTGL-ETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGT 1478
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
E D + +N++I+G+ + EA++L +M G P +T ++ILN + ++ G
Sbjct: 1479 TIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQG 1538
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
+Q H + K G +SNV + SAL+DMY+KCG +++AR VF KN V W +M+ GYAQ
Sbjct: 1539 RQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQS 1598
Query: 459 GLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
G G E L ++ ++ E P+ F VL+AC H G +++G YFN M RD+G+ P +D
Sbjct: 1599 GRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLD 1658
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILST 577
A +V L+ G R+A E +++ P EPN V+W LS CK + + LGR AA+K+
Sbjct: 1659 QYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKM 1718
Query: 578 DPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFA 637
+P T+ ++ ++++YA+A +W E ++RK+MK+K L+K G SW E+ ++H F + +
Sbjct: 1719 EPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVHVFXVADAS 1778
Query: 638 QFQGIDLHEVMNQLSVHLFDGGYVPDPIY 666
+ D+ + +L++ + + GY P +
Sbjct: 1779 HPRSRDICVELERLNLEMKEVGYTPQQXF 1807
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 165/296 (55%), Gaps = 16/296 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +GF N+ + L+ +Y K I DA+++FD M + + +SW+++ISGFS+ G + A
Sbjct: 1342 IIQTGFEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEA 1401
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE--------IHGRMYRSGLELNSH 112
+ +F+ M+ ++PN TYV +SAC +G E +H + + G + +
Sbjct: 1402 ILFFKEMLGSQIKPNCVTYVSXISAC-------TGLETIFDQCALLHAHVVKLGFGVKTF 1454
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
V +CLI+ Y KCG + A +F ++ER++I + S++S Y Q LK+F+ R +G
Sbjct: 1455 VVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNG 1514
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+ ++ + S+L AC L L+ G Q+HSLV K E + FV L+++Y+KC +D A
Sbjct: 1515 LXPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEAR 1574
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGA 287
VF + W+++I GYAQ G+ E + LF ++ G P + F+ VL A
Sbjct: 1575 CVFXQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTA 1630
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 215/446 (48%), Gaps = 11/446 (2%)
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL F M +P + A+++CA + G +IH R+ ++G E N +++ L++
Sbjct: 1300 ALESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALVD 1359
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y KC + A+ VFD + + +SW S++S + + G + F S + + +
Sbjct: 1360 LYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVT 1419
Query: 180 CASVLGACAVLGNL-KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S + AC L + +H+ V K FV LI+ Y+KC ++D A +F
Sbjct: 1420 YVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTT 1479
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D ++++I GY+Q EA+ LFV+M ++GL P++ T + +L A + GR
Sbjct: 1480 IERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGR 1539
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+HSL+ KMG S FV + +LD YSKC ++E+ F + E + V W ++I G+ S
Sbjct: 1540 QVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQSG 1599
Query: 359 HYGEAIELLKDMLF-EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVI 416
E + L + ++ EG P+ ++ +L + ++ G + + G ++
Sbjct: 1600 RGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQ 1659
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVG---YAQHGLGREALEIYSMMQ 472
+ LVD+Y + G L A+++ + + N V W + L Y + LGREA + M+
Sbjct: 1660 YACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKME 1719
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEE 498
P ++ + S GL E
Sbjct: 1720 PCSTAP----YVAMASIYAQAGLWSE 1741
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 164/298 (55%), Gaps = 3/298 (1%)
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
EA++ F +M +SG P++ L + A + G Q+H+ II+ GF F+ + ++
Sbjct: 1299 EALESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALV 1358
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
D Y+KC+ + ++ + FD M++HD VSW ++I+G + EAI K+ML PN
Sbjct: 1359 DLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCV 1418
Query: 381 TYSNILNISSDIPAI-EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
TY + ++ + + I + H +VK GF + S L+D Y+KCGR++ A +F
Sbjct: 1419 TYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGT 1478
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
++ + +N+M+ GY+Q+ G EAL+++ M+ N + P D+T +L+AC + ++++G
Sbjct: 1479 TIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQG 1538
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+S++ G + +++++ +++ G A + +E N V+W +++G
Sbjct: 1539 -RQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEA-RCVFXQAVEKNTVLWTSMITG 1594
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/629 (30%), Positives = 323/629 (51%), Gaps = 67/629 (10%)
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLE-LNSHVSNCLINMYGKCG 125
++C Y V C + K + M + +S + N L+++Y K G
Sbjct: 13 LLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFG 72
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGE---------------------------- 157
L AQ +FD L+R+ SW +LLS+Y + G
Sbjct: 73 KLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSG 132
Query: 158 ---HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
L++F ++ G +E++ S+L A A L +L+ G QIH + + F+
Sbjct: 133 NSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFI 192
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
L ++YAKC +++ A +F + +L +W+ +I GYA+ G+ + I L +M SG
Sbjct: 193 WNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGH 252
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
MP +VT S ++ A Y +C ++E+ +
Sbjct: 253 MPDQVTMSTIIAA-----------------------------------YCQCGRVDEARR 277
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
F E E D+V W A++ G+ + +A+ L +ML E P+ YT S++++ + + +
Sbjct: 278 VFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLAS 337
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
+ G+ H + G ++N+++ SAL+DMY+KCG ++DAR VF+ + ++N+VSWN M+VG
Sbjct: 338 LHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVG 397
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
AQ+G ++ALE++ M + K KP++ TFIG+LSAC+H +E+G YF+S+ HG++P
Sbjct: 398 CAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTP 457
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKI 574
+DH A +V+L G+ +A IK+ +P+ ++W LLS C T D+V AA +
Sbjct: 458 TLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHL 517
Query: 575 LSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTS 634
DP +IMLSN+YA W + A VR +MK K++KK G SW E+ N++H F++
Sbjct: 518 FELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSE 577
Query: 635 RFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ D++E +N L L + G+ P+
Sbjct: 578 DRTHPESEDIYEKLNMLIGKLQEEGFTPN 606
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 226/481 (46%), Gaps = 69/481 (14%)
Query: 6 FHP-NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALIS--------------- 49
F P + +N LL +Y KF ++ DAQ LFD+M +R+ SW+AL+S
Sbjct: 53 FQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATF 112
Query: 50 ----------------GFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDAR 93
GFS P+ +L F+ M EP YT V ++A A D R
Sbjct: 113 DRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLR 172
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
GK+IHG + N + N L +MY KCG + A+++FD ++N +SW ++S Y
Sbjct: 173 YGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYA 232
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
+ G+ + + R SG + + ++++ A
Sbjct: 233 KNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA--------------------------- 265
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
Y +C ++D A RVFS + D+ W+A++ GYA+ G+ +A+ LF +M
Sbjct: 266 --------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEH 317
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ P T S V+ + A + G+ +H I G ++ V++ ++D YSKC ++++
Sbjct: 318 IEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDAR 377
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
F+ M +VVSWNA+I G + H +A+EL ++ML + P+ T+ IL+
Sbjct: 378 SVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCN 437
Query: 394 AIEWGKQTHCCIV-KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTM 451
IE G++ I + G + + +V++ + GR+ A + +++ + + W+T+
Sbjct: 438 WIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTL 497
Query: 452 L 452
L
Sbjct: 498 L 498
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 219/546 (40%), Gaps = 113/546 (20%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I F NV +N L MY K I A+ LFD + ++N++SW+ +ISG+++ G PE
Sbjct: 181 IIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKC 240
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M P+ T ++A
Sbjct: 241 IGLLHQMRLSGHMPDQVTMSTIIAA----------------------------------- 265
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG + A+ VF E++ + W +++ Y + G L +F + ++
Sbjct: 266 YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTL 325
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+SV+ +CA L +L G +H L + V+ LI++Y+KC +D A VF+ +
Sbjct: 326 SSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPT 385
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+A+I G AQ G +A++LF M P VTF +L A L
Sbjct: 386 RNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSAC-----------L 434
Query: 301 HSLIIKMGFSSFTFVANT-----VLDFYS-KCELLEESLKTFDEMDEHDVVSWNALIAGH 354
H I+ G F ++N LD Y+ LL + +
Sbjct: 435 HCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRI------------------- 475
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS---DIPAIEWGKQTHCCIVKPGFD 411
+A+ L+K+M H P+ +S +L+I S DI E + H + P
Sbjct: 476 ------EQAVALIKNM---AHDPDFLIWSTLLSICSTKGDIVNAEVAAR-HLFELDPTIA 525
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL-----VSW----NTMLVGYAQHGLGR 462
++ L +MYA GR D V + + SKN+ SW N + ++
Sbjct: 526 VPYIM---LSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHP 582
Query: 463 EALEIYS-------MMQENKIKPNDNTFIGVL-------SACVHIGLVEEGWHYFNSMIR 508
E+ +IY +QE PN N + + S C H E+ F + +
Sbjct: 583 ESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFH---SEKLALAFGLIKK 639
Query: 509 DHGISP 514
+GISP
Sbjct: 640 PNGISP 645
>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
Length = 691
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 307/555 (55%), Gaps = 5/555 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQIGMPEVALNYFRLM 67
+V N L+ MY F +++A+++FDE ERN +SW+ +IS + + A+ FR M
Sbjct: 134 DVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDAVGVFREM 193
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
V PN + + V+AC D +G+++HG + R+G + + +N L++MY K G +
Sbjct: 194 VWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDI 253
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A VF+ + +SW +L++ G L++ L + GV + F+ +SVL AC
Sbjct: 254 EMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKAC 313
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A G +G QIH + K + D+FVA+GL+++YAK LD A +VF + DL W+
Sbjct: 314 AGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWN 373
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLM--PSEVTFSYVLGAFADVKETIGGRQLHSLII 305
ALI G + G+ E + LF +M GL + T + VL + A ++ +Q+H+L
Sbjct: 374 ALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAE 433
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE-AI 364
K+G S + V N ++D Y KC L+ ++K F+E D++S +++ L+ C +GE AI
Sbjct: 434 KIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTA-LSQCDHGEDAI 492
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L ML +G P+ + S++LN + + A E GKQ H ++K F S+V G+ALV Y
Sbjct: 493 KLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTY 552
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG + DA F L K +VSW+ M+ G AQHG G+ ALE++ M + + PN+ T
Sbjct: 553 AKCGSIEDADMAFSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLT 612
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
VLSAC H GLV++ YF SM GI +H A ++ + G+ + A E + + P
Sbjct: 613 SVLSACNHAGLVDDAKKYFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPF 672
Query: 545 EPNKVVWRCLLSGCK 559
+ N VW LL +
Sbjct: 673 QANAAVWGALLGASR 687
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 183/604 (30%), Positives = 299/604 (49%), Gaps = 15/604 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
NHLL Y + + A+ +FDE+P+ +SWS+L++ +S GMP AL FR M +
Sbjct: 41 NHLLSFYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVP 100
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N Y + V CA D R G ++H + L + V+N L+ MYG G++ A+ +
Sbjct: 101 CNEYA-LPIVLKCAP--DVRFGAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRI 157
Query: 134 FD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
FD ERN++SW ++S+Y + + +F SG +EF + V+ AC +
Sbjct: 158 FDEPGGERNAVSWNGMISAYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRD 217
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+ G Q+H +V + + D F A L+++Y+K +++A+ VF I D+ +W+ALI G
Sbjct: 218 WETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAG 277
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
G A++L ++M G++P+ T S VL A A GRQ+H +IK S
Sbjct: 278 CVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSD 337
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
FVA ++D Y+K L+++ K FD M D++ WNALI+G +GE + L M
Sbjct: 338 EFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRK 397
Query: 373 EG--HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
EG N T + +L ++ + AI KQ H K G S+ + + L+D Y KCGRL
Sbjct: 398 EGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRL 457
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ A KVF+ S +++S +M+ +Q G +A++++ M ++P+ +L+AC
Sbjct: 458 DYAIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNAC 517
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
+ E+G +I+ S A +V+ +A G A P E V
Sbjct: 518 ASLSAYEQGKQVHAHLIKRQFTSDVFAGNA-LVYTYAKCGSIEDADMAFSGLP-EKGVVS 575
Query: 551 WRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSA-HIMLSNVYAEAN---MWDETAKVRK 606
W ++ G H G+ A E E + +I L++V + N + D+ K +
Sbjct: 576 WSAMIGGLAQHGH---GKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKYFE 632
Query: 607 IMKE 610
MKE
Sbjct: 633 SMKE 636
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 161/517 (31%), Positives = 253/517 (48%), Gaps = 46/517 (8%)
Query: 84 SACASRGDARS---GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
SA A G +RS G +H + +SGL L S+ SN L++ Y +C L S+A+ VFD +
Sbjct: 9 SALARFGASRSLLAGAHLHSHLLKSGL-LASY-SNHLLSFYSRCRLPSAARAVFDEIPDP 66
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
+SW SL+++Y G L F R GV +E++ VL CA +++ G Q+H
Sbjct: 67 CHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVL-KCAP--DVRFGAQVH 123
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP-DLTAWSALIGGYAQLGKA 259
+L L D FV L+ +Y +D A R+F + +W+ +I Y + +
Sbjct: 124 ALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDRC 183
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
+A+ +F +M SG P+E FS V+ A ++ GRQ+H ++++ G+ F AN +
Sbjct: 184 RDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANAL 243
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
+D YSK +E + F+++ DVVSWNALIAG + H A+ELL M G PN+
Sbjct: 244 VDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNV 303
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
+T S++L + A G+Q H ++K DS+ + LVDMYAK G L+DARKVFD
Sbjct: 304 FTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDF 363
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN--KIKPNDNTFIGVLSAC------- 490
+ ++L+ WN ++ G + G E L ++ M++ + N T VL +
Sbjct: 364 MPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAIC 423
Query: 491 ----VH-----IGLVEEGWHYFNSMIRDHGISPRMDH------------IASVVHLFACR 529
VH IGL+ + H N +I + R+D+ I S +
Sbjct: 424 HTKQVHALAEKIGLLSDS-HVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTAL 482
Query: 530 GQTRRAYEFIK------SSPIEPNKVVWRCLLSGCKT 560
Q + IK +EP+ V LL+ C +
Sbjct: 483 SQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACAS 519
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 141/456 (30%), Positives = 232/456 (50%), Gaps = 4/456 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ +V T N L+ MY K I A +F+++P +V+SW+ALI+G G A
Sbjct: 228 VVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRA 287
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M + PN +T + ACA G G++IHG M ++ + + V+ L++M
Sbjct: 288 LELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDM 347
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG--VAISEF 178
Y K G L A+ VFD R+ I W +L+S G H L +F RK G + ++
Sbjct: 348 YAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRT 407
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ A+VL + A L + Q+H+L K L D V GLI+ Y KC +LD A +VF
Sbjct: 408 TLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEES 467
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ + ++++ +Q +AI LFV+M GL P S +L A A + G+
Sbjct: 468 CSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGK 527
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+ +IK F+S F N ++ Y+KC +E++ F + E VVSW+A+I G
Sbjct: 528 QVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGLAQHG 587
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIG 417
H A+EL ML EG PN T +++L+ + ++ K+ + + G D
Sbjct: 588 HGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKYFESMKEAFGIDRTEEHY 647
Query: 418 SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
+ ++D+ + G+L DA ++ +++ N W +L
Sbjct: 648 ACMIDILGRAGKLKDAMELVNNMPFQANAAVWGALL 683
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/595 (30%), Positives = 324/595 (54%), Gaps = 32/595 (5%)
Query: 101 RMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH 160
R++ + N + N L++ Y K L + VF A R+ +SW SL+S+Y G +
Sbjct: 65 RVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQ 124
Query: 161 GLKIFLLSRKSG-VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI 219
+K + L +G ++ + +++L + G + +G+Q+H V K + FV L+
Sbjct: 125 SVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLV 184
Query: 220 NLYAK-------------------------------CEKLDLASRVFSNIQLPDLTAWSA 248
++Y+K C +++ + ++F ++Q D +W+A
Sbjct: 185 DMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTA 244
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I G+ Q G EAIDLF +M L + TF VL A V G+Q+H+ II+
Sbjct: 245 MIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD 304
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
+ FV + ++D Y KC+ ++ + F +M+ +VVSW A++ G+ + + EA+++
Sbjct: 305 YQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFC 364
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
DM G P+ +T ++++ +++ ++E G Q HC + G S + + +ALV +Y KCG
Sbjct: 365 DMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCG 424
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ D+ ++F +S + VSW ++ GYAQ G E L ++ M + KP+ TFIGVLS
Sbjct: 425 SIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLS 484
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC GLV++G F SMI++H I P DH ++ LF+ G+ A +FI P P+
Sbjct: 485 ACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDA 544
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
+ W LLS C+ H+++ +G++AAE +L +P +T+++I+LS++YA W+E A +RK M
Sbjct: 545 IGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGM 604
Query: 609 KEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++K L+K+ GCSW + +N++H FS + ++ + +L+ + GYVPD
Sbjct: 605 RDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPD 659
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 156/608 (25%), Positives = 283/608 (46%), Gaps = 85/608 (13%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG-MPEV 59
+I + +P + N+L+ Y KF RI A+++FD+MP+RN+ SW+ L+S +S++ +PE+
Sbjct: 35 IIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEM 94
Query: 60 ALNYFRL--------------------MVCCVLEPNYYTYVG-------AVSA----CAS 88
+ + ++ V N Y G A+S +
Sbjct: 95 ERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASK 154
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERN------- 141
+G G ++HG + + G + V + L++MY K GL+ A+ FD E+N
Sbjct: 155 QGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTL 214
Query: 142 ------------------------SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
SISW ++++ + Q G + +F R + + +
Sbjct: 215 IAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQ 274
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
++ SVL AC + L+ G Q+H+ + + + + FV L+++Y KC+ + A VF
Sbjct: 275 YTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRK 334
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ ++ +W+A++ GY Q G + EA+ +F M ++G+ P + T V+ + A++ G
Sbjct: 335 MNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEG 394
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
Q H + G SF V+N ++ Y KC +E+S + F EM D VSW AL++G+
Sbjct: 395 AQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQF 454
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-----PGFDS 412
E + L + ML G P+ T+ +L+ S ++ G Q ++K P D
Sbjct: 455 GKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDH 514
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+ ++D++++ GRL +ARK + + S + + W ++L H +EI
Sbjct: 515 Y----TCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFH----RNMEIGKWA 566
Query: 472 QEN--KIKP-NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI--SPRMDHI--ASVVH 524
E+ K++P N ++I + S G EE + M RD G+ P I + VH
Sbjct: 567 AESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGM-RDKGLRKEPGCSWIKYKNQVH 625
Query: 525 LFACRGQT 532
+F+ Q+
Sbjct: 626 IFSADDQS 633
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 182/379 (48%), Gaps = 63/379 (16%)
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
C +L + + +IH + K + F+ L++ YAK +++ A RVF + +L +W
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSG----------------LMPSEVTFSYVL--GAF 288
+ L+ Y++L E +F M + L+ S ++ +L G F
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 289 ADVKETIG--------------GRQLHSLIIKMGFSSFTFVANTVLDFYSK--------- 325
+ + G Q+H ++K GF S+ FV + ++D YSK
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198
Query: 326 ----------------------CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
C +E+S + F +M E D +SW A+IAG + EA
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
I+L ++M E + YT+ ++L + A++ GKQ H I++ + N+ +GSALVDM
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDM 318
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y KC + A VF ++ KN+VSW MLVGY Q+G EA++I+ MQ N I+P+D T
Sbjct: 319 YCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTL 378
Query: 484 IGVLSACVHIGLVEEGWHY 502
V+S+C ++ +EEG +
Sbjct: 379 GSVISSCANLASLEEGAQF 397
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 146/326 (44%), Gaps = 71/326 (21%)
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH--------------- 342
+++H IIK + F+ N ++ Y+K + + + + FD+M +
Sbjct: 29 KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKL 88
Query: 343 ----------------DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP-NLYTYSNI 385
D+VSWN+LI+ + ++++ ML+ G N S +
Sbjct: 89 ACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTM 148
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK------------------- 426
L ++S + G Q H +VK GF S V +GS LVDMY+K
Sbjct: 149 LILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNV 208
Query: 427 ------------CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
C R+ D+R++F + K+ +SW M+ G+ Q+GL REA++++ M+
Sbjct: 209 VMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLE 268
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI---ASVVHLFACRGQ 531
++ + TF VL+AC + ++EG +IR + D+I +++V ++ C+ +
Sbjct: 269 NLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIR----TDYQDNIFVGSALVDMY-CKCK 323
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ ++ E + N V W +L G
Sbjct: 324 SIKSAETVFRKMNCKNVVSWTAMLVG 349
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/653 (28%), Positives = 340/653 (52%), Gaps = 36/653 (5%)
Query: 12 TYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
T+N ++ Y + +A+KLF+E P N I+WS+L+SG+ + G L F M
Sbjct: 70 TWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDG 129
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+P+ YT + AC++ +GK IH + LE N V+ L++MY KC L A+
Sbjct: 130 QKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAE 189
Query: 132 FVFDASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
++F + +R N + W ++L+ Y Q GE + ++ F R G+ + F+ S+L AC +
Sbjct: 190 YLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSI 249
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G Q+H + + +V L+++YAKC L A + +++ D+ W+++I
Sbjct: 250 SAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMI 309
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
G G EA+ LF KM + + + T+ VL + A K G +HSL IK GF
Sbjct: 310 VGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFD 369
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
+ V+N ++D Y+K L +L F+++ + DV+SW +L+ G++ + + +A++L DM
Sbjct: 370 ACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDM 429
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
+ + + + + +++ IE+G+Q H +K S + ++L+ MYAKCG L
Sbjct: 430 RTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCL 489
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
DA +V D + ++N++SW ++VGYAQ+
Sbjct: 490 EDAIRVXDSMETRNVISWTAIIVGYAQN-------------------------------- 517
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
GLVE G YF SM + +GI P D A ++ L G+ A + +EP+ +
Sbjct: 518 ---GLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATI 574
Query: 551 WRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
W+ LLS C+ H +L LG A + ++ +P ++ +++LSN+++ A W++ A +R+ MK
Sbjct: 575 WKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKT 634
Query: 611 KSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ ++ G SW E+++++H F + + +++ ++++ + + + G+VPD
Sbjct: 635 MGIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPD 687
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 185/350 (52%), Gaps = 1/350 (0%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEVALNYF 64
N+ L+ MY K + +A+ LF +P+R N + W+A+++G++Q G A+ F
Sbjct: 165 LEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCF 224
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M +E N++T+ ++AC S G+++HG + SG N +V + L++MY KC
Sbjct: 225 KEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKC 284
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L+SA+ + D + + W S++ G L +F + I +F+ SVL
Sbjct: 285 GDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVL 344
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+ A NLK+G +HSL K + K V+ L+++YAK L A VF+ I D+
Sbjct: 345 KSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVI 404
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W++L+ GY G +A+ LF M ++ + + + V A A++ GRQ+H+
Sbjct: 405 SWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANF 464
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
IK S N+++ Y+KC LE++++ D M+ +V+SW A+I G+
Sbjct: 465 IKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGY 514
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 182/351 (51%), Gaps = 9/351 (2%)
Query: 211 DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF 270
DK+ +I+ YA L A ++F+ + + WS+L+ GY + G E + F +M+
Sbjct: 67 DKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMW 126
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE-LL 329
S G PS+ T VL A + + G+ +H IK+ + FVA ++D YSKC+ LL
Sbjct: 127 SDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLL 186
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
E F D + V W A++ G+ + +AI+ K+M +G N +T+ +IL
Sbjct: 187 EAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTAC 246
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
+ I A +G+Q H CI+ GF NV + SALVDMYAKCG L AR + D + ++V WN
Sbjct: 247 TSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWN 306
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV---LSACVHIGLVEEGWHYFNSM 506
+M+VG HG EAL ++ M I+ +D T+ V L++C ++ + E +S+
Sbjct: 307 SMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGES----VHSL 362
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G ++V ++A +G A + + + ++ + + W L++G
Sbjct: 363 TIKTGFDACKTVSNALVDMYAKQGNLSCALD-VFNKILDKDVISWTSLVTG 412
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 137/257 (53%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF PNV + L+ MY K + A+ + D M +V+ W+++I G G E A
Sbjct: 262 IIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEA 321
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + + +TY + + AS + + G+ +H ++G + VSN L++M
Sbjct: 322 LVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDM 381
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G LS A VF+ L+++ ISW SL++ Y G H L++F R + V + +F
Sbjct: 382 YAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVV 441
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A V ACA L ++ G Q+H+ K + LI +YAKC L+ A RV +++
Sbjct: 442 ACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMET 501
Query: 241 PDLTAWSALIGGYAQLG 257
++ +W+A+I GYAQ G
Sbjct: 502 RNVISWTAIIVGYAQNG 518
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 128/278 (46%), Gaps = 34/278 (12%)
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA-----GHLAS------------- 357
+N +L SK ++E+ K FD+M D +WN +I+ G+L
Sbjct: 40 SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNS 99
Query: 358 ----------CHYGEAIELLK---DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCC 404
C G +E L+ M +G P+ YT ++L S + + GK HC
Sbjct: 100 ITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCY 159
Query: 405 IVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGRE 463
+K ++N+ + + LVDMY+KC L +A +F L KN V W ML GYAQ+G +
Sbjct: 160 AIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLK 219
Query: 464 ALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV 523
A++ + M+ ++ N TF +L+AC I G +I G P + +++V
Sbjct: 220 AIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWS-GFGPNVYVQSALV 278
Query: 524 HLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
++A G A + + I+ + V W ++ GC TH
Sbjct: 279 DMYAKCGDLASARMILDTMEID-DVVCWNSMIVGCVTH 315
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 33/228 (14%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +GF N L+ MY K ++ A +F+++ +++VISW++L++G+ G E AL
Sbjct: 364 IKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKAL 423
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M ++ + + SACA G+++H +S N LI MY
Sbjct: 424 QLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMY 483
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG------------EHVHGLK------ 163
KCG L A V D+ RN ISW +++ Y Q G E V+G+K
Sbjct: 484 AKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDRY 543
Query: 164 ---IFLLSRKSGVAISEFSC------------ASVLGACAVLGNLKVG 196
I LL R + +E S+L AC V GNL++G
Sbjct: 544 ACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELG 591
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/485 (35%), Positives = 277/485 (57%), Gaps = 1/485 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S + ACA NL+ +IH+ + D F+ LI++Y KC + A VF ++
Sbjct: 56 SFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRK 115
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W++LI GYAQ EAI L M P+ TF+ +L A ++ GRQ+H
Sbjct: 116 DMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIH 175
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+L +K G+ +V + +LD Y++C ++ + FD++D + VSWNALI+G
Sbjct: 176 ALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
A+ +ML G +TYS++ + + + A+E GK H ++K +G+ L+
Sbjct: 236 SALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLL 295
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAK G + DARKVFD + +K+LV+WN+ML +AQ+GLG+EA+ + M+++ + N
Sbjct: 296 DMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQI 355
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ +L+AC H GLV+EG YF M++++ + P +DH +VV L G A FI
Sbjct: 356 TFLCILTACSHGGLVKEGKRYFE-MMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFK 414
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P+EP VW LL+ C+ HK+ +G++AA+ + DP+D+ ++L N+YA WD
Sbjct: 415 MPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAA 474
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A+VR +MK +KK+ CSW E++N +H F + Q +++++ ++S + GYV
Sbjct: 475 ARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYV 534
Query: 662 PDPIY 666
PD Y
Sbjct: 535 PDMDY 539
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 185/391 (47%), Gaps = 7/391 (1%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L P Y ++ACA + ++IH + S ++ + N LI+MY KC + A+
Sbjct: 47 LAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDAR 106
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD ++ +SW SL++ Y Q V + + K + F+ AS+L A
Sbjct: 107 NVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+ G QIH+L KC D +V L+++YA+C K+D+A+ VF + + +W+ALI
Sbjct: 167 DSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G+A+ G A+ F +M +G + T+S V + A + G+ +H+ +IK
Sbjct: 227 GFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKL 286
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---EAIELLK 368
FV NT+LD Y+K + ++ K FD +D D+V+WN+++ A YG EA+ +
Sbjct: 287 TAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLT---AFAQYGLGKEAVSHFE 343
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+M G N T+ IL S ++ GK+ + + + + +V + + G
Sbjct: 344 EMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAG 403
Query: 429 RLNDARK-VFDHLSSKNLVSWNTMLVGYAQH 458
LN A +F W +L H
Sbjct: 404 LLNYALVFIFKMPMEPTAAVWGALLAACRMH 434
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 179/352 (50%), Gaps = 1/352 (0%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
+S F + N L+ MY K + DA+ +FD+M ++++SW++LI+G++Q MP A+
Sbjct: 79 SSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIG 138
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
M+ +PN +T+ + A + D+ +G++IH + G + +V + L++MY
Sbjct: 139 LLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYA 198
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
+CG + A VFD +N +SW +L+S + + G+ L F ++G + F+ +S
Sbjct: 199 RCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSS 258
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
V + A LG L+ G +H+ V K + FV L+++YAK + A +VF + D
Sbjct: 259 VFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKD 318
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
L W++++ +AQ G EA+ F +M SG+ +++TF +L A + G++
Sbjct: 319 LVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFE 378
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
++ + TV+ + LL +L +M E W AL+A
Sbjct: 379 MMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 163/325 (50%), Gaps = 34/325 (10%)
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
L P+ + + A A K R++H+ + F+ F+ N+++ Y KC + ++
Sbjct: 47 LAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDAR 106
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
FD+M D+VSW +LIAG+ + EAI LL ML PN +T++++L +
Sbjct: 107 NVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
G+Q H VK G+ +V +GSAL+DMYA+CG+++ A VFD L SKN VSWN ++
Sbjct: 167 DSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG-WHYFN-------- 504
G+A+ G G AL ++ M N + T+ V S+ +G +E+G W + +
Sbjct: 227 GFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKL 286
Query: 505 ----------------SMIRDHGISPRMDHIA-----SVVHLFACRGQTRRA---YEFIK 540
SMI + R+D+ S++ FA G + A +E ++
Sbjct: 287 TAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMR 346
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLV 565
S + N++ + C+L+ C +H LV
Sbjct: 347 KSGVYLNQITFLCILTAC-SHGGLV 370
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 131/254 (51%), Gaps = 5/254 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G+H +V + LL MY + +++ A +FD++ +N +SW+ALISGF++ G E AL
Sbjct: 179 VKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESAL 238
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M+ E ++TY S+ A G GK +H + +S +L + V N L++MY
Sbjct: 239 MTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMY 298
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G + A+ VFD ++ ++W S+L+++ Q G + F RKSGV +++ +
Sbjct: 299 AKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFL 358
Query: 182 SVLGACAVLGNLKVGMQIHSLV--FKCALEFDKFVAMGLINLYAKCEKLDLA-SRVFSNI 238
+L AC+ G +K G + ++ + E D +V ++ L + L+ A +F
Sbjct: 359 CILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVT--VVALLGRAGLLNYALVFIFKMP 416
Query: 239 QLPDLTAWSALIGG 252
P W AL+
Sbjct: 417 MEPTAAVWGALLAA 430
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/618 (31%), Positives = 331/618 (53%), Gaps = 41/618 (6%)
Query: 45 SALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR 104
L+ + G AL+ + MV + P+ TY + C + K +H M +
Sbjct: 33 DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92
Query: 105 SGLELNS-HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHG-- 161
+ E + N L+++Y K G L A+ VFD +N +SW +++++Y + H HG
Sbjct: 93 TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYAR---HEHGQE 149
Query: 162 -LKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLIN 220
L F + G+ + F+ AS+L AC +L+V + H + K E + FV GL++
Sbjct: 150 ALGFFYEMQDVGIQPNHFTFASILPACT---DLEVLGEFHDEIVKGGFESNVFVGNGLVD 206
Query: 221 LYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVT 280
+YAK ++ A +F + D+ +W+A+I GY Q G +A+ LF ++ + +T
Sbjct: 207 MYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDV----IT 262
Query: 281 FSYVLGAFADVKETIGGRQL------------HSLI--------IKMGFSSFTFVA---- 316
++ ++ +A + +L +++I +K F F +
Sbjct: 263 WNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNV 322
Query: 317 ---NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
N V+ +++ +EE+LK F M E +VVSWNA+IAG+ + A++L M
Sbjct: 323 ISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMV 382
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN T++ +L + + +E G + H +++ GF S+V++G+ LV MYAKCG + DA
Sbjct: 383 DMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDA 442
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
RKVFD + ++ S + M+VGYA +G +E+LE++ MQ +KP+ TF+GVLSAC H
Sbjct: 443 RKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHA 502
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLV+EG YF+ M R + I+P M+H ++ L G A + I PI+P+ +W
Sbjct: 503 GLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGS 562
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LLS C+TH ++ LG A+ +++ +P++ + +++LSN+YA A WD+ VR MK++ +
Sbjct: 563 LLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKV 622
Query: 614 KKDTGCSWTELQNKMHYF 631
KK GCSW ++ ++H F
Sbjct: 623 KKKLGCSWIVIKKQVHAF 640
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 243/492 (49%), Gaps = 45/492 (9%)
Query: 1 MITSGFHPNVITY-NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV 59
MI + F I+ N L+ +YVK + +A+++FDEMP +NV+SW+A+I+ +++ +
Sbjct: 90 MIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQE 149
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL +F M ++PN++T+ + AC D E H + + G E N V N L++
Sbjct: 150 ALGFFYEMQDVGIQPNHFTFASILPACT---DLEVLGEFHDEIVKGGFESNVFVGNGLVD 206
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY K G + A+ +FD +R+ +SW ++++ Y Q G LK+F K V +
Sbjct: 207 MYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDV----IT 262
Query: 180 CASVLGACAVLGNLKVGMQI------HSLV---------------------FKCALEFDK 212
+++ A G+++ +++ +LV F+ E +
Sbjct: 263 WNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNV 322
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
+I+ +A+ +++ A ++F + ++ +W+A+I GY+Q G+A A+ LF +M
Sbjct: 323 ISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMV 382
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
+ P+ TF+ VL A A + G + H ++I+ GF S V NT++ Y+KC +E++
Sbjct: 383 DMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDA 442
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
K FD M + D S +A+I G+ + E++EL + M F G P+ T+ +L+
Sbjct: 443 RKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHA 502
Query: 393 PAIEWGKQ-----THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLV 446
++ G+Q T + P + ++D+ + G ++A + + + K +
Sbjct: 503 GLVDEGRQYFDIMTRFYHITPAMEHY----GCMIDLLGRAGCFDEANDLINKMPIKPDAD 558
Query: 447 SWNTMLVGYAQH 458
W ++L H
Sbjct: 559 MWGSLLSACRTH 570
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 187/397 (47%), Gaps = 41/397 (10%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF NV N L+ MY K I A++LFD+MP+R+V+SW+A+I+G+ Q G+ E A
Sbjct: 189 IVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDA 248
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL------------- 107
L F+ + + + T+ ++ A GD + E+ +M L
Sbjct: 249 LKLFQE----IPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQN 304
Query: 108 --------------ELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
E N N +I+ + + G + A +F E N +SW ++++ Y
Sbjct: 305 GSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYS 364
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
Q G+ + LK+F + + + + A VL ACA L L+ G + H +V + + D
Sbjct: 365 QNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVL 424
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
V L+ +YAKC ++ A +VF ++ D + SA+I GYA G + E+++LF +M +G
Sbjct: 425 VGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTG 484
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN---TVLDFYSKCELLE 330
L P VTF VL A GRQ ++ + F T ++D + +
Sbjct: 485 LKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTR--FYHITPAMEHYGCMIDLLGRAGCFD 542
Query: 331 ESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIEL 366
E+ ++M + D W +L L++C I+L
Sbjct: 543 EANDLINKMPIKPDADMWGSL----LSACRTHNNIDL 575
>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 204/664 (30%), Positives = 350/664 (52%), Gaps = 10/664 (1%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P+ I YN LL MY A +FD M RNV++W+ LI F ++ A+ F M
Sbjct: 154 PSRIVYNSLLNMYASCQH-EYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANM 212
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV--SNCLINMYGKCG 125
+ + P+ T+V A + GD+R+ K +G M + G + S V + I M+ G
Sbjct: 213 INQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVG 272
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI-SEFSCASVL 184
+ A+ VFD L +N+ W +++ +Y Q V + +F+ + +S + + + SVL
Sbjct: 273 CMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVL 332
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A + L +K+ Q H+ V K + ++ +Y++C +D + +VF + D
Sbjct: 333 TAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAV 392
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ +I + Q G EA+ L +M + VT + +L A ++++ G+Q H+ +
Sbjct: 393 SWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYL 452
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE--MDEHDVVSWNALIAGHLASCHYGE 362
I+ G F + + ++D Y+K + + F++ + D +WNA+IAG+ + +
Sbjct: 453 IRRGIQ-FEGMESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEK 511
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
AI LLK ML + PN T ++IL S + ++ +Q H ++ + NV +G++L D
Sbjct: 512 AILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTD 571
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
Y+KCG ++ A VF KN V++ TM++ Y QHG+G+ AL +Y M + I+P+ T
Sbjct: 572 TYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVT 631
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F+ +LSAC + GLV+EG F SM + H I P ++H V + G+ AYEF+K
Sbjct: 632 FVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGL 691
Query: 543 PIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILS--TDPEDTSAHIMLSNVYAEANMWD 599
+ N + +W LL C+ H LG+ A+K+L+ D H++LSN+YAE W+
Sbjct: 692 GEDANTMEIWGSLLGSCRNHGHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWE 751
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ +VRK MKEK L K+TGCSW E+ ++ F + Q +++ +++ L++ + G
Sbjct: 752 KVDRVRKQMKEKGLHKETGCSWVEIAGFVNCFVSRDEKHPQSSEIYYMLDMLTLDMKYAG 811
Query: 660 YVPD 663
Y P
Sbjct: 812 YKPQ 815
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 229/479 (47%), Gaps = 17/479 (3%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM----VCCVLEPNYYTYVGAVS 84
A L D +P + + W+++I GF +P AL + M C +P YT+ +
Sbjct: 68 ALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDP--YTFSSTLK 125
Query: 85 ACASRGDARSGKEIHGRMYRSGLELNSH----VSNCLINMYGKCGLLSSAQFVFDASLER 140
ACA D +GK IH RS N+ V N L+NMY C A VFD R
Sbjct: 126 ACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQ-HEYALNVFDVMRRR 184
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
N ++W +L+ S+ + + ++ F V S + ++ A + LG+ + +
Sbjct: 185 NVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFY 244
Query: 201 SLVFKCALEF--DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+ K ++ D FV I +++ +D A VF + W+ +I Y Q
Sbjct: 245 GFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNC 304
Query: 259 ACEAIDLFVKMFSSGL-MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
EAID+F++ S + +VT VL A + +++ Q H+ +IK S + N
Sbjct: 305 PVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILN 364
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
V+ YS+C ++ SLK FD+M E D VSWN +I+ + + EA+ L+ +M +
Sbjct: 365 AVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLI 424
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ T + +L+ +S++ + GKQTH +++ G + S L+DMYAK G + A +F
Sbjct: 425 DSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFE-GMESYLIDMYAKSGSIRTAELLF 483
Query: 438 DH--LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+ S ++ +WN ++ GY Q+GL +A+ + M + PN T +L AC +G
Sbjct: 484 EQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMG 542
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/485 (35%), Positives = 277/485 (57%), Gaps = 1/485 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ + ACA NL+ ++H+ + D F+ LI+LY KC + A +VF ++
Sbjct: 56 TFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRK 115
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W++LI GYAQ EAI L M P+ TF+ +L A ++ GRQ+H
Sbjct: 116 DMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIH 175
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+L +K + +V + +LD Y++C +++ + FD++D + VSWNALI+G
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
A+ +ML G +TYS++ + + + A+E GK H ++K G+ L+
Sbjct: 236 TALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLL 295
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAK G + DARKVFD + K+LV+WNTML +AQ+GLG+EA+ + M+++ I N
Sbjct: 296 DMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQV 355
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ +L+AC H GLV+EG YF M++++ + P +DH +VV L G A FI
Sbjct: 356 TFLCILTACSHGGLVKEGKRYFE-MMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFK 414
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
PIEP VW LL+ C+ HK+ +G++AA+ + DP+D+ ++L N+YA WD
Sbjct: 415 MPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAA 474
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A+VR+IMK +KK+ CSW E++N +H F + + +++++ Q+S + GYV
Sbjct: 475 ARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYV 534
Query: 662 PDPIY 666
PD Y
Sbjct: 535 PDMDY 539
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 156/287 (54%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +S F + N L+ +Y K + +A+K+FDEM ++++SW++LI+G++Q MPE A
Sbjct: 77 LASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEA 136
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M+ +PN +T+ + A + D+ G++IH + + +V + L++M
Sbjct: 137 IGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDM 196
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG++ A VFD +N +SW +L+S + + G+ L F ++G + F+
Sbjct: 197 YARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTY 256
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+SV + A LG L+ G +H+ + K + F L+++YAK + A +VF +
Sbjct: 257 SSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDD 316
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
DL W+ ++ +AQ G EA+ F +M SG+ ++VTF +L A
Sbjct: 317 KDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTA 363
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 177/363 (48%), Gaps = 6/363 (1%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L P Y ++ACA + +++H + S ++ + N LI++Y KCG + A+
Sbjct: 47 LAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEAR 106
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD ++ +SW SL++ Y Q + + K + F+ AS+L A
Sbjct: 107 KVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHA 166
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+ +G QIH+L KC D +V L+++YA+C +D+A+ VF + + +W+ALI
Sbjct: 167 DSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALIS 226
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G+A+ G A+ F +M +G + T+S V + A + G+ +H+ +IK
Sbjct: 227 GFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKM 286
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---EAIELLK 368
F NT+LD Y+K + ++ K FD +D+ D+V+WN ++ A YG EA+ +
Sbjct: 287 TAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLT---AFAQYGLGKEAVSHFE 343
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+M G N T+ IL S ++ GK+ + + + + +V + + G
Sbjct: 344 EMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAG 403
Query: 429 RLN 431
LN
Sbjct: 404 LLN 406
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 161/325 (49%), Gaps = 34/325 (10%)
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
L P+ + + A A K R++H+ + F+ F+ N+++ Y KC + E+
Sbjct: 47 LAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEAR 106
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
K FDEM D+VSW +LIAG+ + EAI LL ML PN +T++++L +
Sbjct: 107 KVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHA 166
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
G+Q H VK + +V +GSAL+DMYA+CG ++ A VFD L SKN VSWN ++
Sbjct: 167 DSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALIS 226
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG-WHYFN-------- 504
G+A+ G G AL ++ M N + T+ V S+ +G +E+G W + +
Sbjct: 227 GFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKM 286
Query: 505 ----------------SMIRDHGISPRMDHIA-----SVVHLFACRGQTRRA---YEFIK 540
SMI + R+D +++ FA G + A +E ++
Sbjct: 287 TAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMR 346
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLV 565
S I N+V + C+L+ C +H LV
Sbjct: 347 KSGIYLNQVTFLCILTAC-SHGGLV 370
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/537 (34%), Positives = 299/537 (55%), Gaps = 1/537 (0%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
C + G IH ++ +G N H+S LI Y K G SA+ VFD ER +SW
Sbjct: 7 CIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSW 66
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+ +S Y Q G + L +FL ++G ++F+ SVL AC L L+ GMQI + K
Sbjct: 67 SAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEK 126
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
+ V L++L++KC K++ AS +F ++ D+ +W+A+IG YA G + ++ +
Sbjct: 127 SRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRM 186
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F M G+ P TF VL A + I Q+H LII++G+ S ++ +++D Y+K
Sbjct: 187 FRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAK 246
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EAIELLKDMLFEGHCPNLYTYSN 384
CE L + + M D++S AL+ G+ +Y +A++L K++ + +
Sbjct: 247 CESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCS 306
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
+ NI ++I ++ G+Q H +K +V +G+AL+DMYAK G + DA + F+ + KN
Sbjct: 307 MFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKN 366
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
++SW +++ GY HG G EA+ ++ M+ +KPND TF+ +L AC H GL EGW FN
Sbjct: 367 VISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFN 426
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
+MI + I PR +H + +V LFA G AY I I+PN +W +L C + ++
Sbjct: 427 NMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYIYGNM 486
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSW 621
L AA + DPE++ +++L+++YA A WD K+RK+M+E++LKK G S+
Sbjct: 487 PLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAPGYSF 543
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/494 (28%), Positives = 251/494 (50%), Gaps = 29/494 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++T+GF N+ L++ Y K A+K+FD MPER V+SWSA ISG+SQ G + A
Sbjct: 23 ILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGYSQNGCYQDA 82
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ + N +TY + AC + G +I G + +S N V + L+++
Sbjct: 83 LLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNLIVQSALLDL 142
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ KCG + A ++F ER+ +SW +++ +Y G ++F + G++ F+
Sbjct: 143 HSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGMSPDLFTF 202
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A + ++ QIH L+ + ++ LI+ YAKCE L A ++ ++ +
Sbjct: 203 GSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPM 262
Query: 241 PDLTAWSALIGGYAQLGK-ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ + +AL+ GYA+ + +A+DLF ++ + +V + A++ GRQ
Sbjct: 263 KDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQ 322
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+L +K + + N ++D Y+K ++++ + F+EM+E +V+SW +LI G+ + H
Sbjct: 323 IHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGH 382
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS-NVVIG- 417
EAI L K M +EG PN T+ ++L + HC + G++ N +I
Sbjct: 383 GHEAIALFKKMEYEGLKPNDITFLSLLFACN-----------HCGLTGEGWECFNNMISK 431
Query: 418 ----------SALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVG---YAQHGLGRE 463
S +VD++A+ G L +A + + ++ K N W +L Y L E
Sbjct: 432 YNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYIYGNMPLAEE 491
Query: 464 -ALEIYSMMQENKI 476
A+ ++ M EN +
Sbjct: 492 AAIHLFKMDPENSV 505
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 188/596 (31%), Positives = 315/596 (52%), Gaps = 28/596 (4%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA--Q 131
P++ + + +C D R G+ +HG + R G+ + + N L+NMY K L Q
Sbjct: 8 PDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQ 67
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
D+ + + + +C + H L L R +G+ + G +
Sbjct: 68 RFCDSKM----LGGIPEPREIGKCS-NSHDLPCELDERVAGIDQN--------GDLNQMS 114
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK----LDLASRVFSNIQLPDLTAWS 247
N+ + + VF D +Y+K EK L +VF + D+ +W+
Sbjct: 115 NILYQVNTYKKVFDEGKTSD---------VYSKKEKESYYLGSLRKVFEMMPKRDIVSWN 165
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+I G AQ G +A+ + +M ++ L P T S VL FA+ + G+++H I+
Sbjct: 166 TVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRN 225
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
G+ + F+ ++++D Y+KC +++S + F + +HD +SWN++IAG + + + E ++
Sbjct: 226 GYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFF 285
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+ ML PN ++S+I+ + + + GKQ H I++ FD NV I SALVDMYAKC
Sbjct: 286 QQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKC 345
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G + AR +FD + ++VSW M++GYA HG +A+ ++ M+ +KPN F+ VL
Sbjct: 346 GNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVL 405
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
+AC H GLV+E W YFNSM +D+ I P ++H A+V L G+ AYEFI IEP
Sbjct: 406 TACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPT 465
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
VW LL+ C+ HK++ L ++K+ + DP++ A+++LSN+Y+ A W + K+R
Sbjct: 466 GSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIA 525
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
M++K +KK CSW E++NK+H F + ++E + L + GYV D
Sbjct: 526 MRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLD 581
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 182/370 (49%), Gaps = 17/370 (4%)
Query: 30 QKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASR 89
+K+F+ MP+R+++SW+ +ISG +Q GM E AL R M L P+ +T + A
Sbjct: 150 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 209
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
+ GKEIHG R+G + + + + LI+MY KC + + VF + + ISW S++
Sbjct: 210 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 269
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ Q G GLK F + + + S +S++ ACA L L +G Q+H + + +
Sbjct: 270 AGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFD 329
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
+ F+A L+++YAKC + A +F ++L D+ +W+A+I GYA G A +AI LF +M
Sbjct: 330 GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM 389
Query: 270 FSSGLMPSEVTFSYVLGA-----FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
G+ P+ V F VL A D I G + VA D
Sbjct: 390 EVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVA----DLLG 445
Query: 325 KCELLEESLKTFDEMDEHDVVS-WNALIAGHLASCHYGEAIELLKDM---LFEGHCPNLY 380
+ LEE+ + +M S W+ L LA+C + IEL + + LF N+
Sbjct: 446 RVGRLEEAYEFISDMHIEPTGSVWSTL----LAACRVHKNIELAEKVSKKLFTVDPQNIG 501
Query: 381 TYSNILNISS 390
Y + NI S
Sbjct: 502 AYVLLSNIYS 511
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 134/258 (51%), Gaps = 12/258 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +G+ +V + L+ MY K +R++D+ ++F +P+ + ISW+++I+G Q GM + L
Sbjct: 223 IRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGL 282
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+F+ M+ ++PN+ ++ + ACA GK++HG + RS + N +++ L++MY
Sbjct: 283 KFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMY 342
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + +A+++FD + +SW +++ Y G + +F GV + +
Sbjct: 343 AKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFM 402
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL------INLYAKCEKLDLASRVF 235
+VL AC+ G+ + + ++ D + GL +L + +L+ A
Sbjct: 403 AVLTACS-----HAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFI 457
Query: 236 SNIQL-PDLTAWSALIGG 252
S++ + P + WS L+
Sbjct: 458 SDMHIEPTGSVWSTLLAA 475
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I S F NV + L+ MY K I A+ +FD+M +++SW+A+I G++ G A
Sbjct: 323 IIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDA 382
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM---YR--SGLELNSHVSN 115
++ F+ M ++PNY ++ ++AC+ G + M YR GLE + V++
Sbjct: 383 ISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVAD 442
Query: 116 CLINMYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
L G+ G L A +F+ D +E W +LL++
Sbjct: 443 LL----GRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 475
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 318/615 (51%), Gaps = 66/615 (10%)
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N L++M+ K G L+ A+ VF ER+++SW ++ + G +K L G
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE-------- 226
++F+ +VL +CAV VG ++HS V K L VA ++N+Y KC
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTV 221
Query: 227 -----------------------KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
++DLA +F ++ + +W+A+I GY Q G +A+
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKAL 281
Query: 264 DLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
LF +M S + P E T + VL A A++ G+Q+H+ I++ + + V N ++
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIST 341
Query: 323 YSKC-------ELLEESLKT--------------------------FDEMDEHDVVSWNA 349
Y+K ++++S++T F M+ DVV+W A
Sbjct: 342 YAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTA 401
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I G+ + EAI+L + M+ G PN YT + +L++ + + +++GKQ HC ++
Sbjct: 402 MIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL 461
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIY 468
+ + + +A++ MYA+ G AR++FD + K ++W +M+V AQHG G EA+ ++
Sbjct: 462 LERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 521
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
M ++P+ T++GVLSAC H G V EG Y++ + +H I+P M H A +V L A
Sbjct: 522 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLAR 581
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIML 588
G A EFI+ P+EP+ + W LLS C+ HK+ L AAEK+LS DP ++ A+ +
Sbjct: 582 AGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAI 641
Query: 589 SNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVM 648
+NVY+ W + A++ K KEK+++K+TG SWT +++K+H F Q ++ +
Sbjct: 642 ANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMA 701
Query: 649 NQLSVHLFDGGYVPD 663
++ + G+VPD
Sbjct: 702 ARMWEEIKGAGFVPD 716
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVIS-----WSALISGFSQIG 55
M+ +G P+ ITY +L +N+ ++ +D++ + I+ ++ ++ ++ G
Sbjct: 524 MLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAG 583
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
+ A + R M +EP+ + +SAC +A E+ S NS +
Sbjct: 584 LFSEAQEFIRRM---PVEPDAIAWGSLLSACRVHKNAELA-ELAAEKLLSIDPNNSGAYS 639
Query: 116 CLINMYGKCGLLSSAQFVFDASLER-----NSISWVSLLS 150
+ N+Y CG S A ++ A E+ SW + S
Sbjct: 640 AIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRS 679
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 189/588 (32%), Positives = 314/588 (53%), Gaps = 5/588 (0%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ P Y Y+ C + G GK H R+ R N + NC++ MY C ++A+
Sbjct: 78 INPRSYEYL--FKMCGTLGALSDGKLFHNRLQRMA-NSNKFIDNCILQMYCDCKSFTAAE 134
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL-GACAVL 190
FD ++R+ SW +++S+Y + G + +FL G+ I FS S L + A
Sbjct: 135 RFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGI-IPNFSIFSTLIMSFADP 193
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
L +G QIHS + + D + + N+Y KC LD A + + A + L+
Sbjct: 194 SMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLM 253
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
GY Q + +A+ LF KM S G+ FS +L A A + + G+Q+HS IK+G
Sbjct: 254 VGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLE 313
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S V ++DFY KC E + + F+ + E + SW+ALIAG+ S + A+E+ K +
Sbjct: 314 SEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTI 373
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
+G N + Y+NI S + + G Q H +K G + + SA++ MY+KCG++
Sbjct: 374 RSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKV 433
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ A + F + + V+W ++ +A HG EAL ++ MQ + ++PN TFIG+L+AC
Sbjct: 434 DYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNAC 493
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
H GLV+EG + +SM +G++P +DH ++ +++ G A E I+S P EP+ +
Sbjct: 494 SHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMS 553
Query: 551 WRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
W+ LL GC + ++L +G AA+ I DP D++ ++++ N+YA A WDE A+ RK+M E
Sbjct: 554 WKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAE 613
Query: 611 KSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
++L+K+ CSW ++ K+H F Q ++ + +L+V G
Sbjct: 614 RNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVSFKKG 661
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 240/480 (50%), Gaps = 8/480 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+ N N +L MY A++ FD++ +R++ SW+ +IS +++ G + A+ F
Sbjct: 111 NSNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLR 170
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ + PN+ + + + A GK+IH ++ R + + + NMY KCG
Sbjct: 171 MLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGW 230
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A+ + +++++ L+ Y Q + L +F GV + F + +L A
Sbjct: 231 LDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKA 290
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA LG+L G QIHS K LE + V L++ Y KC + + A + F +I P+ +W
Sbjct: 291 CAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSW 350
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
SALI GY Q GK A+++F + S G++ + ++ + A + V + I G Q+H+ IK
Sbjct: 351 SALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIK 410
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G ++ + ++ YSKC ++ + + F +D+ D V+W A+I H EA+ L
Sbjct: 411 KGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRL 470
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-THCCIVKPGFDSNVVIGSALVDMYA 425
K+M G PN+ T+ +LN S ++ GKQ K G + + + ++D+Y+
Sbjct: 471 FKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYS 530
Query: 426 KCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN--KIKPNDNT 482
+ G L +A +V + +++SW ++L G R LEI + +N ++ P D+
Sbjct: 531 RAGLLLEALEVIRSMPFEPDVMSWKSLLGG----CWSRRNLEIGMIAADNIFRLDPLDSA 586
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 125/255 (49%), Gaps = 6/255 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G V L+ YVK +R A++ F+ + E N SWSALI+G+ Q G + AL
Sbjct: 308 IKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRAL 367
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ + + N + Y AC++ D G +IH + GL + +I MY
Sbjct: 368 EVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMY 427
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A F A + ++++W +++ ++ G+ L++F + SGV + +
Sbjct: 428 SKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFI 487
Query: 182 SVLGACAVLGNLKVGMQ-IHSLVFKCALE--FDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+L AC+ G +K G Q + S+ K + D + M I++Y++ L A V ++
Sbjct: 488 GLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCM--IDIYSRAGLLLEALEVIRSM 545
Query: 239 QL-PDLTAWSALIGG 252
PD+ +W +L+GG
Sbjct: 546 PFEPDVMSWKSLLGG 560
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 303/531 (57%), Gaps = 8/531 (1%)
Query: 109 LNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLS 168
LN SN LI+MY KC A VFD+ ERN +SW +L+S + G+ L +F
Sbjct: 410 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469
Query: 169 RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
+ G+ +EF+ ++ L AC +L L+ G+QIH K E V L+++Y+KC ++
Sbjct: 470 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 529
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL--MPSEVTFSYVLG 286
+ A +VF I L +W+A+I G+ G +A+D F M + + P E T + +L
Sbjct: 530 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 589
Query: 287 AFADVKETIGGRQLHSLIIKMGF--SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDV 344
A + G+Q+H +++ GF S + +++D Y KC L + K FD++ E +
Sbjct: 590 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 649
Query: 345 VSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCC 404
+SW++LI G+ + EA+ L K + + + S+I+ + +D + GKQ
Sbjct: 650 ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 709
Query: 405 IVK--PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
VK G +++V+ +++VDMY KCG +++A K F + K+++SW ++ GY +HGLG+
Sbjct: 710 AVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGK 767
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
+++ I+ M + I+P++ ++ VLSAC H G+++EG F+ ++ HGI PR++H A V
Sbjct: 768 KSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV 827
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDT 582
V L G+ + A I + PI+PN +W+ LLS C+ H D+ LG+ + +L D ++
Sbjct: 828 VDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNP 887
Query: 583 SAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
+ ++M+SN+Y +A W+E R++ K LKK+ G SW E++ ++H+F +
Sbjct: 888 ANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRS 938
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/468 (31%), Positives = 241/468 (51%), Gaps = 9/468 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N+IT N+L+ MY K A K+FD MPERNV+SWSAL+SG G + +L+ F M
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ PN +T+ + AC G +IHG + G E+ V N L++MY KCG ++
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 530
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA--ISEFSCASVLGA 186
A+ VF ++R+ ISW ++++ + G L F + +++ + EF+ S+L A
Sbjct: 531 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 590
Query: 187 CAVLGNLKVGMQIHSLVFKCALE--FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C+ G + G QIH + + + L++LY KC L A + F I+ +
Sbjct: 591 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 650
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+WS+LI GYAQ G+ EA+ LF ++ S ++G FAD G+Q+ +L
Sbjct: 651 SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 710
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K+ T V N+V+D Y KC L++E+ K F EM DV+SW +I G+ +++
Sbjct: 711 VKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSV 770
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDM 423
+ +ML P+ Y +L+ S I+ G++ +++ G V + +VD+
Sbjct: 771 RIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDL 830
Query: 424 YAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG---LGREALEI 467
+ GRL +A+ + D + K N+ W T+L HG LG+E +I
Sbjct: 831 LGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKI 878
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 192/372 (51%), Gaps = 10/372 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF V N L+ MY K RIN+A+K+F + +R++ISW+A+I+GF G AL+ F
Sbjct: 508 GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTF 567
Query: 65 RLMVCCVLE--PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH--VSNCLINM 120
+M ++ P+ +T + AC+S G +GK+IHG + RSG S ++ L+++
Sbjct: 568 GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDL 627
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L SA+ FD E+ ISW SL+ Y Q GE V + +F ++ I F+
Sbjct: 628 YVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFAL 687
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S++G A L+ G Q+ +L K + V ++++Y KC +D A + F+ +QL
Sbjct: 688 SSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL 747
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+ +I GY + G +++ +F +M + P EV + VL A + G +L
Sbjct: 748 KDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEEL 807
Query: 301 HSLIIKM-GFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASC 358
S +++ G V+D + L+E+ D M + +V W L L+ C
Sbjct: 808 FSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL----LSLC 863
Query: 359 HYGEAIELLKDM 370
IEL K++
Sbjct: 864 RVHGDIELGKEV 875
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 203/676 (30%), Positives = 350/676 (51%), Gaps = 55/676 (8%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N+ N LL MY K DA ++F+ + E N ++++ ++ G SQ + L F
Sbjct: 168 GFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELF 227
Query: 65 RLMV---CCVLEPNYYTYVGAVSACASRG---DAR------SGKEIHGRMYRSGLELNSH 112
RLM+ CV + T + + S G D+R GK+IH + G E + H
Sbjct: 228 RLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLH 287
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
+ N L++MY K G + SA+ VF+ + + +SW ++S Y + L+ F + G
Sbjct: 288 LCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCG 347
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+ + ++L AC G++KVG QI F C
Sbjct: 348 YEPDDVTYINMLTACVKSGDVKVGRQI----FDC-------------------------- 377
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
+ P L +W+A++ GY Q EA++LF KM P T + +L + A++
Sbjct: 378 -----MSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELG 432
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
G+Q+H++ K+GF +VA+++++ YSKC +E S F ++ E DVV WN++IA
Sbjct: 433 LLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIA 492
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
G + +A+ K M G P+ ++++ I + + + ++ G+Q H I+K G+
Sbjct: 493 GFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVD 552
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
NV +GS+LV+MY KCG + AR FD + KN+V+WN M+ GYA +G G EA+ +Y M
Sbjct: 553 NVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMI 612
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+ KP+D TF+ VL+AC H LV+EG F+SM++ + P++DH ++ G+
Sbjct: 613 SSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRF 672
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
+ + P + + +VW +LS C+ H ++ L + AAE++ +P +++ +++L+N+Y
Sbjct: 673 NEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSAPYVLLANMY 732
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGCSWTE----LQNKMHYFSTSRFAQFQGIDLHEVM 648
+ WD+ VR +M + + KD G S +E +QNK +F+ + ++ F +D + +
Sbjct: 733 SSMGRWDDAQVVRDLMSDNQIHKDPGYSRSEFKYDVQNKTSFFA-NMYSCFGNLDDAQFV 791
Query: 649 NQLSVHLFDGGYVPDP 664
L+ D + DP
Sbjct: 792 RDLTS---DKQFYKDP 804
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/564 (27%), Positives = 279/564 (49%), Gaps = 50/564 (8%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H N+ +YN +L + K + + A +LF +MPERN +S + +I+ + G AL+ + L
Sbjct: 68 HKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDL 127
Query: 67 M-VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M V ++P++ T+ SAC D G+ HG + + G + N +VSN L+ MY KCG
Sbjct: 128 MMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCG 187
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L A VF+ +E N +++ +++ Q + GL++F L + G+ + S +++L
Sbjct: 188 LNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILV 247
Query: 186 ACAV------------LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
CA L G QIH+L K E D + L+++YAK +D A
Sbjct: 248 ICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAEN 307
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
VF N+ + +W+ +I GY + +A++ F +M G P +VT+ +L A +
Sbjct: 308 VFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGD 367
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
GRQ+ FD M ++SWNA+++G
Sbjct: 368 VKVGRQI-----------------------------------FDCMSSPSLISWNAILSG 392
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ S +GEA+EL + M F+ P+ T + IL+ +++ +E GKQ H K GF +
Sbjct: 393 YNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDD 452
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V + S+L+++Y+KCG++ ++ VF LS ++V WN+M+ G++ + L ++AL + M++
Sbjct: 453 VYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQ 512
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
P++ +F + S+C + + +G +I+D G + +S+V ++ G
Sbjct: 513 FGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKD-GYVDNVFVGSSLVEMYCKCGDVG 571
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSG 557
A + P N V W ++ G
Sbjct: 572 AARYYFDMMP-GKNIVTWNEMIHG 594
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 227/474 (47%), Gaps = 48/474 (10%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF ++ N LL MY K ++ A+ +F+ + + +V+SW+ +ISG+ E AL
Sbjct: 278 VKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKAL 337
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M CC EP+ TY+ ++AC GD + G++I
Sbjct: 338 ECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQI----------------------- 374
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
FD + ISW ++LS Y Q +H +++F + + A
Sbjct: 375 ------------FDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLA 422
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L +CA LG L+ G Q+H++ K D +VA LIN+Y+KC K++++ VFS +
Sbjct: 423 IILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSEL 482
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ W+++I G++ +A+ F +M G PSE +F+ + + A + G+Q+H
Sbjct: 483 DVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIH 542
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ IIK G+ FV +++++ Y KC + + FD M ++V+WN +I G+ + +
Sbjct: 543 AQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGL 602
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-----PGFDSNVVI 416
EA+ L KDM+ G P+ T+ +L S ++ G + +++ P D I
Sbjct: 603 EAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCI 662
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVG---YAQHGLGREALE 466
+D + GR N+ + D + K + + W +L +A L + A E
Sbjct: 663 ----IDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAE 712
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 249/536 (46%), Gaps = 93/536 (17%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+E + + +C + S K IH R++R L ++ + N LI++Y KC ++SA
Sbjct: 1 MEVKSLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAH 60
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAI--------------- 175
VFD +N S+ ++LS++C+ + ++FL + ++ V++
Sbjct: 61 HVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQ 120
Query: 176 ----------------SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI 219
S + A+V AC L ++ G + H LV K + + +V+ L+
Sbjct: 121 ALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALL 180
Query: 220 NLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEV 279
+Y KC + A RVF I P+ ++ ++GG +Q + E ++LF M G+ V
Sbjct: 181 CMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSV 240
Query: 280 TFSYVL------GAFADVKETIG------GRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
+ S +L +F ++ G G+Q+H+L +K GF + N++LD Y+K
Sbjct: 241 SLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTG 300
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
++ + F+ +D+H VVSWN +I+G+ C +A+E + M G+ P+ TY N+L
Sbjct: 301 DMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINML- 359
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
T C K G + R++FD +SS +L+S
Sbjct: 360 -------------TAC---------------------VKSGDVKVGRQIFDCMSSPSLIS 385
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
WN +L GY Q EA+E++ MQ P+ T +LS+C +GL+E G
Sbjct: 386 WNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQV----- 440
Query: 508 RDHGISPRM---DHI---ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
H +S ++ D + +S++++++ G+ + + + S E + V W +++G
Sbjct: 441 --HAVSQKLGFYDDVYVASSLINVYSKCGKMEVS-KHVFSKLSELDVVCWNSMIAG 493
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ NV + L+ MY K + A+ FD MP +N+++W+ +I G++ G A
Sbjct: 545 IIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEA 604
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN--CLI 118
++ ++ M+ +P+ T+V ++AC+ G EI M + E+ + + C+I
Sbjct: 605 VSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQK-FEVVPKLDHYTCII 663
Query: 119 NMYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
+ G+ G + + + D + ++I W +LSS
Sbjct: 664 DCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSS 697
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 318/615 (51%), Gaps = 66/615 (10%)
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N L++M+ K G L+ A+ VF ER+++SW ++ + G +K L G
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE-------- 226
++F+ +VL +CAV VG ++HS V K L VA ++N+Y KC
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTV 221
Query: 227 -----------------------KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
++DLA +F ++ + +W+A+I GY Q G +A+
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKAL 281
Query: 264 DLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
LF +M S + P E T + VL A A++ G+Q+H+ I++ + + V N ++
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIST 341
Query: 323 YSKC-------ELLEESLKT--------------------------FDEMDEHDVVSWNA 349
Y+K ++++S++T F M+ DVV+W A
Sbjct: 342 YAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTA 401
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I G+ + EAI+L + M+ G PN YT + +L++ + + +++GKQ HC ++
Sbjct: 402 MIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL 461
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIY 468
+ + + +A++ MYA+ G AR++FD + K ++W +M+V AQHG G EA+ ++
Sbjct: 462 LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 521
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
M ++P+ T++GVLSAC H G V EG Y++ + +H I+P M H A +V L A
Sbjct: 522 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLAR 581
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIML 588
G A EFI+ P+EP+ + W LLS C+ HK+ L AAEK+LS DP ++ A+ +
Sbjct: 582 AGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAI 641
Query: 589 SNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVM 648
+NVY+ W + A++ K KEK+++K+TG SWT +++K+H F Q ++ +
Sbjct: 642 ANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMA 701
Query: 649 NQLSVHLFDGGYVPD 663
++ + G+VPD
Sbjct: 702 ARMWEEIKGAGFVPD 716
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVIS-----WSALISGFSQIG 55
M+ +G P+ ITY +L +N+ ++ +D++ + I+ ++ ++ ++ G
Sbjct: 524 MLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAG 583
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
+ A + R M +EP+ + +SAC +A E+ S NS +
Sbjct: 584 LFSEAQEFIRRM---PVEPDAIAWGSLLSACRVHKNAELA-ELAAEKLLSIDPNNSGAYS 639
Query: 116 CLINMYGKCGLLSSAQFVFDASLER-----NSISWVSLLS 150
+ N+Y CG S A ++ A E+ SW + S
Sbjct: 640 AIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRS 679
>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
Length = 772
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 197/620 (31%), Positives = 323/620 (52%), Gaps = 9/620 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V + L+ MY + + DA KLF+EM ER+V++W+A++SG + G L Y MV
Sbjct: 148 SVAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMV 207
Query: 69 CCV----LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
PN T + AC + SG+ +HG + G+ + V + L +MY KC
Sbjct: 208 RLAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKC 267
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
A +F E++ +SW SL+ YC G +++F +SG+ + + +L
Sbjct: 268 HSTEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLL 327
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
GN+ G H+++ K + V LI++Y K E +D A RVF + D
Sbjct: 328 SGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDAD 387
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMF---SSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+W+ +I GY + G + ++L+ +M + + + + + + + E GR H
Sbjct: 388 SWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAH 447
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHY 360
IK + VAN ++ Y +C + + K F + DVV+WN LI+ + H
Sbjct: 448 CYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHS 507
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A+ L ML EG PN T +++ +++ A+E G++ H + + G+D +V I +AL
Sbjct: 508 NTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTAL 567
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMYAKCG+L AR++FD + ++V+WN M+ GY HG ++ALE++ M+ IKPN
Sbjct: 568 IDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNG 627
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ +LSAC H GL+EEG F M + + + P + H A +V L G + A + +
Sbjct: 628 VTFLAILSACCHSGLLEEGRQLFTRMGK-YSLEPNLKHYACMVDLLGKSGHLQEAEDMVL 686
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+ P+EP+ +W LLS CK H D +G A+K ++D E+ +I++SN Y A WDE
Sbjct: 687 AMPVEPDGGIWGTLLSACKLHDDFEMGLRIAKKAFASDAENEGYYILISNSYGSAKKWDE 746
Query: 601 TAKVRKIMKEKSLKKDTGCS 620
K+R+ MK ++K G S
Sbjct: 747 IEKLREAMKNHGVQKGAGWS 766
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 157/580 (27%), Positives = 265/580 (45%), Gaps = 26/580 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+TSG L+ Y R A F P + W++LI AL
Sbjct: 36 VTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCASDFVAAL 95
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL----NSHVSNCL 117
N R M+ P+ +T A SA A G G +H R GL + V + L
Sbjct: 96 NAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSVAVPSSL 155
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL----LSRKSGV 173
+ MY +CG++ A +F+ ER+ ++W +++S + GE GL+ + L+
Sbjct: 156 VYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKA 215
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+ + S L AC VL L G +H K + V L ++Y+KC + A
Sbjct: 216 RPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACS 275
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+F + D+ +W++LIG Y G EA++LF +M SGL P +V S +L +
Sbjct: 276 LFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGN 335
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
GG+ H++I+K F V N ++ Y K EL++ + + F + + D SWN +I G
Sbjct: 336 VHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVG 395
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI---------EWGKQTHCC 404
+ + + +EL ++M F TY + + +S + AI G+ HC
Sbjct: 396 YCKAGCDVKCLELYREMQFRD------TYEFLCDANSLVSAISSCSRLVELRLGRSAHCY 449
Query: 405 IVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGRE 463
+K D + + + L+ MY +CG+ + A K+F K ++V+WNT++ YA G
Sbjct: 450 SIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNT 509
Query: 464 ALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV 523
A+ +Y M + PN T I V+SAC ++ +E G +S +++ G + +++
Sbjct: 510 AVSLYDQMLTEGLTPNSTTLITVISACANLVALERG-EKIHSYVKEMGWDYDVSINTALI 568
Query: 524 HLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
++A GQ A I S ++ + V W ++SG H +
Sbjct: 569 DMYAKCGQLGTARR-IFDSMLQHDVVAWNVMISGYGMHGE 607
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 180/362 (49%), Gaps = 15/362 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ F NV+ N L+ MY KF +++A ++F + +R+ SW+ +I G+ + G
Sbjct: 346 IMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYCKAGCDVKC 405
Query: 61 LNYFRLM--------VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH 112
L +R M +C + + V A+S+C+ + R G+ H + L+ +S
Sbjct: 406 LELYREMQFRDTYEFLC-----DANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDEDSS 460
Query: 113 VSNCLINMYGKCGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
V+N LI MYG+CG A +F A L+ + ++W +L+SSY G + ++
Sbjct: 461 VANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTE 520
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G+ + + +V+ ACA L L+ G +IHS V + ++D + LI++YAKC +L A
Sbjct: 521 GLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTA 580
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
R+F ++ D+ AW+ +I GY G+A +A++LF KM + P+ VTF +L A
Sbjct: 581 RRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHS 640
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNAL 350
GRQL + + K ++D K L+E+ M E D W L
Sbjct: 641 GLLEEGRQLFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTL 700
Query: 351 IA 352
++
Sbjct: 701 LS 702
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 184/408 (45%), Gaps = 11/408 (2%)
Query: 97 EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
+H SGL + L++ Y G A F A ++ W SL+ ++
Sbjct: 30 RVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCAS 89
Query: 157 EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL----EFDK 212
+ V L S S F+ A A LG L VG +H+ + L
Sbjct: 90 DFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSV 149
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF-- 270
V L+ +YA+C + A ++F ++ D+ AW+A++ G + G+ + + V+M
Sbjct: 150 AVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRL 209
Query: 271 --SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
P+ T L A + E GR LH +K+G V + + YSKC
Sbjct: 210 AGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHS 269
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
E++ F E+ E DVVSW +LI + EA+EL ++M+ G P+ S +L+
Sbjct: 270 TEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSG 329
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ + GK H I+K F NV++G+AL+ MY K +++A +VF L ++ SW
Sbjct: 330 LGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSW 389
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKP---NDNTFIGVLSACVHI 493
N M+VGY + G + LE+Y MQ + N+ + +S+C +
Sbjct: 390 NLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRL 437
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 210/492 (42%), Gaps = 61/492 (12%)
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
+++H+L L + L++ Y+ + LA+ FS PD W++LI +
Sbjct: 29 LRVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCA 88
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF---- 312
A++ +M +S PS T A A++ G +H+ ++ G +
Sbjct: 89 SDFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGS 148
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V ++++ Y++C ++ +++K F+EM E DVV+W A+++G + + G+ + L +M+
Sbjct: 149 VAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVR 208
Query: 373 ---EGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+G PN T + L + + G+ H VK G + ++ SAL MY+KC
Sbjct: 209 LAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCH 268
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
DA +F L K++VSW +++ Y GL REA+E++ M E+ ++P+D +LS
Sbjct: 269 STEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLS 328
Query: 489 ACVHIGLVEEGWHYF---------------NSMIRDHGISPRMDHIASVVHLFACRG--- 530
+ G V G + N++I +G +D+ V L R
Sbjct: 329 GLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADS 388
Query: 531 ------------------------QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVL 566
Q R YEF+ + N +V +S C +L L
Sbjct: 389 WNLMIVGYCKAGCDVKCLELYREMQFRDTYEFL----CDANSLV--SAISSCSRLVELRL 442
Query: 567 GRYA-AEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQ 625
GR A I ED+S +L +Y +D K+ + K LK D +W L
Sbjct: 443 GRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAK---LKGDV-VTWNTLI 498
Query: 626 NKMHYFSTSRFA 637
+ + S A
Sbjct: 499 SSYAHLGHSNTA 510
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G+ +V L+ MY K ++ A+++FD M + +V++W+ +ISG+ G + AL F
Sbjct: 556 GWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELF 615
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M ++PN T++ +SAC G G+++ RM + LE N C++++ GK
Sbjct: 616 GKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRMGKYSLEPNLKHYACMVDLLGKS 675
Query: 125 GLLSSAQ-FVFDASLERNSISWVSLLSS 151
G L A+ V +E + W +LLS+
Sbjct: 676 GHLQEAEDMVLAMPVEPDGGIWGTLLSA 703
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 200/669 (29%), Positives = 339/669 (50%), Gaps = 27/669 (4%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+P+V T L+ Y++F + LFD M RN++SW+A+ISG+ +G AL F
Sbjct: 196 NPHVAT--ALIGFYLRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQ 252
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ ++ + T + AV ACA G + GK+IH + + ++ N L+NMY G
Sbjct: 253 MLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGS 312
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L S+ +F++ R++ W S++S+Y G H + +F+ + GV E + +L
Sbjct: 313 LESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSM 372
Query: 187 CAVLGN-LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
C L + L G +H+ V K + D + L+++Y + ++ ++F ++ D+ +
Sbjct: 373 CEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIIS 432
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ +I A+ +A +LF +M S + P+ T +L A DV GR +H ++
Sbjct: 433 WNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVM 492
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K + + D Y C + F+ + D++SWNA+I
Sbjct: 493 KHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIXKAE---------- 542
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS--NVVIGSALVDM 423
PN T N+L+ + + + G+ H + + GF ++ + +A + M
Sbjct: 543 -----------PNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITM 591
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
YA+CG L A +F L +N++SWN M+ GY +G G +A+ +S M E+ +PN TF
Sbjct: 592 YARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTF 651
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ VLSAC H G +E G F+SM++D ++P + H + +V L A G A EFI S P
Sbjct: 652 VSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMP 711
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
IEP+ VWR LLS C+ + D + EK+ +P + +++LSNVYA A +W E +
Sbjct: 712 IEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRR 771
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+R +KEK L+K G SW ++N++H FS + Q ++ ++ L + + GY PD
Sbjct: 772 IRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPD 831
Query: 664 PIYSSHFEE 672
+ H E+
Sbjct: 832 LRWVFHEED 840
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 157/545 (28%), Positives = 268/545 (49%), Gaps = 34/545 (6%)
Query: 20 YVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTY 79
Y K + DA+ +FD M +R+V+ W+A++ G+ G E A+ R M L PN T
Sbjct: 105 YCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTM 164
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
V + AC + R G+ +HG R+G+ + N HV+ LI Y + + +FD +
Sbjct: 165 VALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLFDLMV 223
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL---GACAVLGNLKV 195
RN +SW +++S Y G++ L++F+ + V +F C ++L ACA LG+LK+
Sbjct: 224 VRNIVSWNAMISGYYDVGDYFKALELFV---QMLVDEVKFDCVTMLVAVQACAELGSLKL 280
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G QIH L K D ++ L+N+Y+ L+ + ++F ++ D W+++I YA
Sbjct: 281 GKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAA 340
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE-TIGGRQLHSLIIKMGFSSFTF 314
G EA+DLF++M S G+ E T +L ++ + G+ LH+ +IK G
Sbjct: 341 FGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDAS 400
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
+ N +L Y++ +E K FD M D++SWN +I + +A EL + M
Sbjct: 401 LGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESE 460
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
PN YT +IL D+ +++G+ H ++K + N + +AL DMY CG AR
Sbjct: 461 IKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATAR 520
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+F+ ++L+SWN M+ K +PN T I VLS+ H+
Sbjct: 521 DLFEGCPDRDLISWNAMIX---------------------KAEPNSVTIINVLSSFTHLA 559
Query: 495 LVEEGWHYFNSMIRDHGISPRMD--HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
+ +G ++ + G S +D + + ++A G + A K+ P + N + W
Sbjct: 560 TLPQG-QSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP-KRNIISWN 617
Query: 553 CLLSG 557
+++G
Sbjct: 618 AMIAG 622
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 129/544 (23%), Positives = 266/544 (48%), Gaps = 5/544 (0%)
Query: 44 WSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY 103
W+++I + + + L+ + M + PN T + ACA++ GK IH +
Sbjct: 28 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 87
Query: 104 RSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLK 163
+ L + V +++ Y KCG + A+ VFDA +R+ + W +++ Y G + +
Sbjct: 88 GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 147
Query: 164 IFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL-EFDKFVAMGLINLY 222
+ + + + + ++L AC L++G +H + + + + VA LI Y
Sbjct: 148 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY 207
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
+ + + + +F + + ++ +W+A+I GY +G +A++LFV+M + VT
Sbjct: 208 LRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTML 266
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
+ A A++ G+Q+H L IK F ++ N +L+ YS LE S + F+ +
Sbjct: 267 VAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNR 326
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA-IEWGKQT 401
D WN++I+ + A + EA++L M EG + T +L++ ++ + + GK
Sbjct: 327 DAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSL 386
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H ++K G + +G+AL+ MY + + +K+FD + +++SWNTM++ A++ L
Sbjct: 387 HAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLR 446
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
+A E++ M+E++IKPN T I +L+AC + ++ G + + H I +
Sbjct: 447 AQACELFERMRESEIKPNSYTIISILAACEDVTCLDFG-RSIHGYVMKHSIEINQPLRTA 505
Query: 522 VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPED 581
+ ++ G A + + P + + + W ++ + + ++ ++ L+T P+
Sbjct: 506 LADMYMNCGDEATARDLFEGCP-DRDLISWNAMIXKAEPNSVTIINVLSSFTHLATLPQG 564
Query: 582 TSAH 585
S H
Sbjct: 565 QSLH 568
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 223/478 (46%), Gaps = 28/478 (5%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F ++ N LL MY + + +LF+ +P R+ W+++IS ++ G E A++ F
Sbjct: 293 FVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFI 352
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDA-RSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M ++ + T V +S C GK +H + +SG+ +++ + N L++MY +
Sbjct: 353 RMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTEL 412
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ S Q +FD + ISW +++ + + ++F R+S + + ++ S+L
Sbjct: 413 NCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISIL 472
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC + L G IH V K ++E ++ + L ++Y C A +F DL
Sbjct: 473 AACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLI 532
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+A+I P+ VT VL +F + G+ LH+ +
Sbjct: 533 SWNAMIXKAE---------------------PNSVTIINVLSSFTHLATLPQGQSLHAYV 571
Query: 305 IKMGFSSF--TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
+ GFS +AN + Y++C L+ + F + + +++SWNA+IAG+ + +
Sbjct: 572 TRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSD 631
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALV 421
A+ ML +G PN T+ ++L+ S IE G Q H + +V S +V
Sbjct: 632 AMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIV 691
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
D+ A+ G +++AR+ D + + S W +L + ++A I+ + +K++P
Sbjct: 692 DLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKL--DKLEP 747
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 171/368 (46%), Gaps = 30/368 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + N LL MY + + + QK+FD M ++ISW+ +I ++ + A
Sbjct: 390 VIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQA 449
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M ++PN YT + ++AC G+ IHG + + +E+N + L +M
Sbjct: 450 CELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADM 509
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y CG ++A+ +F+ +R+ ISW +++ + + V I
Sbjct: 510 YMNCGDEATARDLFEGCPDRDLISWNAMIXK----------------AEPNSVTI----- 548
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFK--CALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+VL + L L G +H+ V + +L D +A I +YA+C L A +F +
Sbjct: 549 INVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTL 608
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
++ +W+A+I GY G+ +A+ F +M G P+ VTF VL A + G
Sbjct: 609 PKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGL 668
Query: 299 QL-HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLA 356
QL HS++ + + ++D ++ ++E+ + D M E D W AL L+
Sbjct: 669 QLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRAL----LS 724
Query: 357 SCH-YGEA 363
SC Y +A
Sbjct: 725 SCRAYSDA 732
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 178/383 (46%), Gaps = 21/383 (5%)
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
MG+ ++L L+ + IQ+ D W+++I A L + + +M S G++
Sbjct: 1 MGMTTASMGLQRLTLSP---TKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVL 57
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P+ T VL A A G+ +H I V V+DFY KC +E++
Sbjct: 58 PNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCV 117
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
FD M + DVV WNA++ G++ Y EA+ L+++M E PN T +L +
Sbjct: 118 FDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASEL 177
Query: 396 EWGKQTHC-CIVKPGFDSNVVIGSALVDMYAKCGRLNDARK---VFDHLSSKNLVSWNTM 451
G+ H C+ FDSN + +AL+ Y + D R +FD + +N+VSWN M
Sbjct: 178 RLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF----DMRVLPLLFDLMVVRNIVSWNAM 233
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
+ GY G +ALE++ M +++K + T + + AC +G ++ G I+
Sbjct: 234 ISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEF 293
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS-----GCKTHKDLVL 566
+ + + +++++++ G +++ +S P + +W ++S GC +
Sbjct: 294 VED-LYILNALLNMYSNNGSLESSHQLFESVP-NRDAPLWNSMISAYAAFGCHEEAMDLF 351
Query: 567 GRYAAEKILSTDPEDTSAHIMLS 589
R +E + ++ + IMLS
Sbjct: 352 IRMQSEGV---KKDERTVVIMLS 371
>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
Length = 667
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 201/625 (32%), Positives = 324/625 (51%), Gaps = 15/625 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWS-ALISGFSQIGMPEVALNY 63
G HP L ++Y R + A L +MP+ +S+S +L+ ++ +G AL
Sbjct: 47 GLHP-------LFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAV 99
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+ M ++ T+ A ACA R G+ +H R +G +++V N LI+MY
Sbjct: 100 YSAMRAF----DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMS 155
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + +A+ VF A R +SW ++++ + G L++F GV I + SV
Sbjct: 156 CGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSV 215
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PD 242
L ACA +L G +H LV L V LI++Y KC L+ A RVF + + D
Sbjct: 216 LPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKD 275
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM-PSEVTFSYVLGAFADVKETIGGRQLH 301
+ +W+A+IG Y +A EAI L +M SG P+ VT Y+L A A + + H
Sbjct: 276 VVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTH 335
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+L I++G S V ++D Y++C ++ T E +WNA ++G+ S
Sbjct: 336 ALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTL-ERGSWRAETWNAALSGYTVSGREK 394
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+AIEL K M+ E P+ T ++IL ++ ++ GK HC ++ GF + I + L+
Sbjct: 395 KAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLI 454
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
D+Y+K G L+ A +F L K++V+W T++ GY HG R A+ +Y M E+ KPN
Sbjct: 455 DVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTV 514
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
T +L AC H G+++EG F M HG+ P +H + +V + G+ A+ I+
Sbjct: 515 TIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQD 574
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P EP+ VW LL C HK++ G AA+++ DPE+T ++++L N+YA A+ W +
Sbjct: 575 MPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDV 634
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQN 626
VR++M E+ L K+ G S E ++
Sbjct: 635 QDVRRMMVERGLLKEPGSSLVEARS 659
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 135/509 (26%), Positives = 230/509 (45%), Gaps = 11/509 (2%)
Query: 105 SGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV-SLLSSYCQCGEHVHGLK 163
SG L H + L +Y CG SSA + + +S+ SLL SY G H L
Sbjct: 39 SGHLLRYHGLHPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALA 98
Query: 164 IFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYA 223
++ R A + ACA L + G +H D +V LI++Y
Sbjct: 99 VYSAMR----AFDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYM 154
Query: 224 KCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSY 283
C + A VF ++ + +W+A+I G + G A A+++F +M + G+ T
Sbjct: 155 SCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVS 214
Query: 284 VLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EH 342
VL A A K+ GR +H L+ G + V N ++D Y KC LE++ + FD +
Sbjct: 215 VLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDK 274
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQT 401
DVVSW A+I ++ + EAI L ML G PN T +L+ + +P+ + K T
Sbjct: 275 DVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCT 334
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H ++ G S++ + +AL+D YA+CG++ R + S +WN L GY G
Sbjct: 335 HALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLER-GSWRAETWNAALSGYTVSGRE 393
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
++A+E++ M ++P+ T +L A ++EG + + + G +
Sbjct: 394 KKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKN-IHCFLLTLGFLRSTEIATG 452
Query: 522 VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPED 581
++ +++ G A+ + P E + V W +++G H ++++ + +
Sbjct: 453 LIDVYSKAGDLDAAWALFQWLP-EKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGGKP 511
Query: 582 TSAHI-MLSNVYAEANMWDETAKVRKIMK 609
+ I L + A M DE KV K M+
Sbjct: 512 NTVTIATLLYACSHAGMIDEGIKVFKDMR 540
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 192/662 (29%), Positives = 359/662 (54%), Gaps = 17/662 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I+SGF +V N L+ MY K + A +F+ + +++SW+ ++SGF + + AL
Sbjct: 105 ISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQR---SDDAL 161
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
N+ M + + T ++ C+ G ++H R+ + GL+ V N LI MY
Sbjct: 162 NFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMY 221
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH-VHGLKIFLLSRKSGVAISEFSC 180
+C L A+ VFD ++ +SW ++LS Y Q G + + +FL K G+ + S
Sbjct: 222 SRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSF 281
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ AC ++G QIHSL K + V LI+ Y+KCE ++ A VF +I
Sbjct: 282 TGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIID 341
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+ +I + +A LF +M G+ P++VTF ++ A G+ +
Sbjct: 342 RNVVSWTTMISISEE-----DATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMI 396
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + +K F S V+N+++ Y+K E + +S+K F+E++ +++SWN+LI+G+ + +
Sbjct: 397 HGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLW 456
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILN--ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA++ L E PN +T+ ++L+ S++ ++ G++ H I+K G ++N ++ S
Sbjct: 457 QEALQTFLSALMESR-PNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSS 515
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAK G + ++ VF KN V+W ++ +A+HG + ++ M+ +KP
Sbjct: 516 ALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKP 575
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ V++AC G+V+ G+ FNSM++DH I P +H +S+V + G+ + A EF
Sbjct: 576 DSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEF 635
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
+ P V + LL C+ H ++ + + A+ ++ +P + +++++SN+YAE W
Sbjct: 636 VGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEW 695
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNK-----MHYFSTSRFAQFQGIDLHEVMNQLSV 653
++ AK+RK M+E+ ++K+ G SW ++ + +H FS+ Q +++ + L +
Sbjct: 696 EKVAKIRKGMRERGVRKEIGFSWVDVGDADGSLYLHGFSSDDKFHPQSEEIYRMAETLGL 755
Query: 654 HL 655
+
Sbjct: 756 EM 757
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 160/534 (29%), Positives = 277/534 (51%), Gaps = 14/534 (2%)
Query: 33 FDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDA 92
D+ P+ + S + + + + AL+ F+ + N A+ A GD+
Sbjct: 35 LDQSPQTTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCGDS 94
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
+ G +IH SG + V N L+NMY K GL A VF+ + +SW ++LS +
Sbjct: 95 KLGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGF 154
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
+ + L L +GVA +C +VL C+ G Q+HS + KC L+ +
Sbjct: 155 QRSDD---ALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEV 211
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA-CEAIDLFVKMFS 271
FV LI +Y++C +L A RVF ++ DL +W+A++ GYAQ G + EAI +F++M
Sbjct: 212 FVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLK 271
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
G+ V+F+ + A KE GRQ+HSL +K+G+ + V N ++ YSKCE +E+
Sbjct: 272 EGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIED 331
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+ F+ + + +VVSW +I S +A L +M +G PN T+ +++ +
Sbjct: 332 AKLVFESIIDRNVVSWTTMI-----SISEEDATSLFNEMRRDGVYPNDVTFVGLIHAITM 386
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+E G+ H VK F S + + ++L+ MYAK ++D+ KVF+ L+ + ++SWN++
Sbjct: 387 KNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSL 446
Query: 452 LVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVE-EGWHYFNSMIRD 509
+ GYAQ+GL +EAL+ + S + E+ +PN+ TF VLS+ + +S I
Sbjct: 447 ISGYAQNGLWQEALQTFLSALMES--RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILK 504
Query: 510 HGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
G++ ++++ ++A RG + +P++ N+V W ++S H D
Sbjct: 505 LGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLK-NEVAWTAIISAHARHGD 557
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 233/443 (52%), Gaps = 18/443 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV- 59
++ G V N L+ MY + R+ +A+++FDEM ++++SW+A++SG++Q G +
Sbjct: 202 ILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLE 261
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
A+ F M+ ++ ++ ++ GA+SAC + G++IH + G + + V N LI+
Sbjct: 262 AILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLIS 321
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KC + A+ VF++ ++RN +SW +++S + +F R+ GV ++ +
Sbjct: 322 TYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEE-----DATSLFNEMRRDGVYPNDVT 376
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++ A + ++ G IH + K + + V+ LI +YAK E + + +VF +
Sbjct: 377 FVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELN 436
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM---PSEVTFSYVLGAFADVKETIG 296
++ +W++LI GYAQ G EA+ F+ S LM P+E TF VL + A E I
Sbjct: 437 YREIISWNSLISGYAQNGLWQEALQTFL----SALMESRPNEFTFGSVLSSIASA-EAIS 491
Query: 297 ---GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G++ HS I+K+G ++ V++ +LD Y+K + ESL F E + V+W A+I+
Sbjct: 492 MRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISA 551
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF-DS 412
H Y + L KDM EG P+ T+ ++ ++ G Q +VK +
Sbjct: 552 HARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEP 611
Query: 413 NVVIGSALVDMYAKCGRLNDARK 435
+ S++VDM + GRL +A +
Sbjct: 612 SPEHYSSMVDMLGRAGRLKEAEE 634
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 198/654 (30%), Positives = 354/654 (54%), Gaps = 26/654 (3%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
++ +N + Y++ R ++A ++F MP + +S++A+ISG+ + G E+A R++
Sbjct: 58 DIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELA----RMLF 113
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ E + ++ + + +E+ RM E + N +++ Y + G +
Sbjct: 114 DEMPERDLVSWNVMIKGYVRNRNLGKARELFERM----PERDVCSWNTILSGYAQNGCVD 169
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ VFD E+N +SW +LLS+Y Q + +F + A+ ++C +LG
Sbjct: 170 DARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLF--GSRENWALVSWNC--LLG--- 222
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMG-LINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
G +K + + F +++ V+ +I YA+ ++D A ++F + D+ W+
Sbjct: 223 --GFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWT 280
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A++ GY Q EA +LF +M +EV+++ +L + + ++L ++
Sbjct: 281 AMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVEMAKELFDVMPCR 336
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
S++ NT++ Y++C + E+ FD+M + D VSW A+IAG+ S H EA+ L
Sbjct: 337 NVSTW----NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLF 392
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M EG N ++S+ L+ +D+ A+E GKQ H +VK G+++ +G+AL+ MY KC
Sbjct: 393 VLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 452
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G + +A +F ++ K++VSWNTM+ GY++HG G EAL + M+ +KP+D T + VL
Sbjct: 453 GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVL 512
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC H GLV++G YF++M +D+G+ P H A +V L G A+ +K+ P EP+
Sbjct: 513 SACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPD 572
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
+W LL + H + L AA+KI + +PE++ +++LSN+YA + W + K+R
Sbjct: 573 AAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVR 632
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
M++K +KK G SW E+QNK H FS + ++ + L + + GYV
Sbjct: 633 MRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYV 686
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ N LLLMY K I +A LF EM ++++SW+ +I+G+S+ G E A
Sbjct: 430 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEA 489
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE-IHGRMYRSGLELNSHVSNCLIN 119
L +F M L+P+ T V +SAC+ G G++ H G+ NS C+++
Sbjct: 490 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVD 549
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGL---------KIFLLS- 168
+ G+ GLL A + + E ++ W +LL + VHG KIF +
Sbjct: 550 LLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGA-----SRVHGNTELAETAADKIFAMEP 604
Query: 169 RKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
SG+ + + + G +G L+V M+
Sbjct: 605 ENSGMYVLLSNLYASSGRWGDVGKLRVRMR 634
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 316 ANTVLDFYS-----KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
AN+ +F+S + ++ + K + + D+ WN I+ ++ + EA+ + K M
Sbjct: 26 ANSASNFHSSKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRM 85
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
P + S IS + E+ P + ++V + ++ Y + L
Sbjct: 86 ------PRWSSVSYNAMISGYLRNGEFELARMLFDEMP--ERDLVSWNVMIKGYVRNRNL 137
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
AR++F+ + +++ SWNT+L GYAQ+G +A ++ M E ND ++ +LSA
Sbjct: 138 GKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEK----NDVSWNALLSAY 193
Query: 491 VHIGLVEEGWHYFNS 505
V +EE F S
Sbjct: 194 VQNSKLEEACVLFGS 208
>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
Length = 667
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 201/625 (32%), Positives = 325/625 (52%), Gaps = 15/625 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWS-ALISGFSQIGMPEVALNY 63
G HP L ++Y R + A L +MP+ +S+S +L+ ++ +G AL
Sbjct: 47 GLHP-------LFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAV 99
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+ M ++ T+ A ACA R G+ +H R +G +++V N LI+MY
Sbjct: 100 YSAMRAF----DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMS 155
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + +A+ VF A R +SW ++++ + G L++F GV I + SV
Sbjct: 156 CGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSV 215
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PD 242
L ACA +L G +H LV L V LI++Y KC L+ A RVF + + D
Sbjct: 216 LPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKD 275
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM-PSEVTFSYVLGAFADVKETIGGRQLH 301
+ +W+A+IG Y +A EAI L +M SG P+ VT Y+L A A + + H
Sbjct: 276 VVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTH 335
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+L I++G S V ++D Y++C ++ T E +WNA ++G+ S
Sbjct: 336 ALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTL-ERGSWRAETWNAALSGYTVSGREK 394
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+AIEL K M+ E P+ T ++IL ++ ++ GK HC ++ GF + I + L+
Sbjct: 395 KAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLI 454
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
D+Y+K G L+ A +F L K++V+W T++ GY+ HG R A+ +Y M E+ KPN
Sbjct: 455 DVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTV 514
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
T +L AC H G+++EG F M HG+ P +H + +V + G+ A+ I+
Sbjct: 515 TIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQD 574
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P EP+ VW LL C HK++ G AA+++ DPE+T ++++L N+YA A+ W +
Sbjct: 575 MPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDV 634
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQN 626
VR++M E+ L K+ G S E ++
Sbjct: 635 QDVRRMMVERGLLKEPGSSLVEARS 659
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 135/509 (26%), Positives = 230/509 (45%), Gaps = 11/509 (2%)
Query: 105 SGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV-SLLSSYCQCGEHVHGLK 163
SG L H + L +Y CG SSA + + +S+ SLL SY G H L
Sbjct: 39 SGHLLRYHGLHPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALA 98
Query: 164 IFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYA 223
++ R A + ACA L + G +H D +V LI++Y
Sbjct: 99 VYSAMR----AFDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYM 154
Query: 224 KCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSY 283
C + A VF ++ + +W+A+I G + G A A+++F +M + G+ T
Sbjct: 155 SCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVS 214
Query: 284 VLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EH 342
VL A A K+ GR +H L+ G + V N ++D Y KC LE++ + FD +
Sbjct: 215 VLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDK 274
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQT 401
DVVSW A+I ++ + EAI L ML G PN T +L+ + +P+ + K T
Sbjct: 275 DVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCT 334
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H ++ G S++ + +AL+D YA+CG++ R + S +WN L GY G
Sbjct: 335 HALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLER-GSWRAETWNAALSGYTVSGRE 393
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
++A+E++ M ++P+ T +L A ++EG + + + G +
Sbjct: 394 KKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKN-IHCFLLTLGFLRSTEIATG 452
Query: 522 VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPED 581
++ +++ G A+ + P E + V W +++G H ++++ + +
Sbjct: 453 LIDVYSKAGDLDAAWALFQWLP-EKDVVAWTTIIAGYSIHGHARTAILLYDRMVESGGKP 511
Query: 582 TSAHI-MLSNVYAEANMWDETAKVRKIMK 609
+ I L + A M DE KV K M+
Sbjct: 512 NTVTIATLLYACSHAGMIDEGIKVFKDMR 540
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 205/669 (30%), Positives = 350/669 (52%), Gaps = 27/669 (4%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
LL MY K S + DA+K+FD + + V+ W+A+I+ ++Q E A+ F M+ ++
Sbjct: 141 LLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAE 200
Query: 76 YYTYVGAVSACASRGDARSGKEI--------HGRMYRSGLELNSHVSNCLINMYGKCGLL 127
T++G + AC+ D K + H ++ +S + L+N YG CG L
Sbjct: 201 RITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLH------DSSFATALVNFYGSCGDL 254
Query: 128 SSAQFVFDASLERNSISWV---SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
A F R+ + + ++++ Y Q L++F + GV + +C +VL
Sbjct: 255 EQAFRAF----SRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVL 310
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLASRVFSNIQLPD 242
AC+ L+ G IH F + FD+ V G LIN+Y KC L+ A VF ++Q D
Sbjct: 311 NACSGPRGLEEGRMIHG--FMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRD 368
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ +W+ +I + Q + EA+ L M G+ +++F L A + GR +HS
Sbjct: 369 VISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHS 428
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG- 361
I++ G + + N +LD Y C+ +++ + F M D VSWNA+I + A
Sbjct: 429 WIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSS 488
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA+ L + M G P++ ++ L+ + ++ GK H I + G +SN+ + +A++
Sbjct: 489 EALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVL 548
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
+MYAK G L ARK+F + +++SWN M+ +AQHG + L + M PND
Sbjct: 549 NMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDV 608
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDH-GISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ V+SAC H GLV++G F S++ D ISPR +H +V L A G+ A +FI
Sbjct: 609 TFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIA 668
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
++P++P++V+ +L K HKD+ R +AE ++ P+ ++A+++LSN+Y E DE
Sbjct: 669 AAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDE 728
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
AK+R++M EK+++K+ S ++ ++H F T + ++ E + +LS+ + GY
Sbjct: 729 GAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGY 788
Query: 661 VPDPIYSSH 669
PD H
Sbjct: 789 TPDTTLMLH 797
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 167/554 (30%), Positives = 277/554 (50%), Gaps = 15/554 (2%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MYV + DA+ FD MP ++ ++W+ LI QIG E AL+ FR M + P
Sbjct: 39 LVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPV 98
Query: 76 YYTYVGAVSACASRGDA-RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
+V + AC++ + G+ IHG + + +E + +VS L++MYGKC + A+ VF
Sbjct: 99 NRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVF 158
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D + + W +++++Y Q H +++F GV + VL AC+ L +L+
Sbjct: 159 DGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLE 218
Query: 195 VGMQIHSLVFKCALE------FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
V LV C E D A L+N Y C L+ A R FS +L +L +A
Sbjct: 219 VA----KLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRHRL-ELILATA 273
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I Y Q + EA++LF M G+ + VL A + + GR +H + ++
Sbjct: 274 MITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIR 333
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F N +++ Y KC LEE+++ F M DV+SWN +IA H + EA+ LL
Sbjct: 334 FDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLH 393
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M +G + ++ N L + + A+ G+ H IV+ G ++V++ +A++DMY C
Sbjct: 394 LMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCK 453
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGY-AQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
+DA +VF + +++ VSWN M+ Y AQ L EAL ++ MQ + P+ +F+ L
Sbjct: 454 STDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAAL 513
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC + EG + IR+ G+ M +V++++A G A + P+ P+
Sbjct: 514 SACAAQASLAEG-KLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPL-PD 571
Query: 548 KVVWRCLLSGCKTH 561
+ W ++S H
Sbjct: 572 VISWNGMISAFAQH 585
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 138/499 (27%), Positives = 251/499 (50%), Gaps = 28/499 (5%)
Query: 90 GDARS---GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV 146
D+RS GKE+H R+ +S ++ + + L+ MY CG L A+ FD +++++W
Sbjct: 9 ADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWA 68
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN-LKVGMQIHSLVFK 205
L+ ++ Q G+ L +F + GVA + +VLGAC+ L+ G +IH ++
Sbjct: 69 RLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRG 128
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
A+E D +V+ L+++Y KC ++ A +VF I+ + W+A+I YAQ +AI +
Sbjct: 129 TAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQV 188
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK------MGFSSFTFVANTV 319
F M G+ +TF VL A + +K+ + +L L ++ + SSF A +
Sbjct: 189 FYAMLLEGVKAERITFIGVLDACSKLKD-LEVAKLVKLCVEEREHDHLHDSSF---ATAL 244
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
++FY C LE++ + F +++ A+I + + EA+EL K ML EG +
Sbjct: 245 VNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDR 303
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
+LN S +E G+ H + + FD +V G+AL++MY KCG L +A +VF
Sbjct: 304 IACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRS 363
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ ++++SWNT++ + QH EAL + +MQ + +K + +F+ L C + +G
Sbjct: 364 MQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKG 423
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK 559
+S I + GI + +++ ++ T A ++ ++V W +++
Sbjct: 424 -RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKAR-DQVSWNAMITA-- 479
Query: 560 THKDLVLGRYAAEKILSTD 578
YAA+ LS++
Sbjct: 480 ---------YAAQPRLSSE 489
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 6/333 (1%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L A +L +G ++H+ + K A++ F+ L+ +Y C L A F + +
Sbjct: 2 ADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPV 61
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA-FADVKETIGGRQ 299
D W+ LI + Q+G + +A+ LF M G+ P F VLGA AD + GR+
Sbjct: 62 QDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRR 121
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H ++ S +V+ T+L Y KC +E++ K FD + VV WNA+I + H
Sbjct: 122 IHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD--SNVVIG 417
+ +AI++ ML EG T+ +L+ S + +E K C+ + D +
Sbjct: 182 HEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFA 241
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ALV+ Y CG L A + F L+ M+ Y Q EALE++ +M +K
Sbjct: 242 TALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVK 300
Query: 478 PNDNTFIGVLSACVHIGLVEEGW--HYFNSMIR 508
+ + VL+AC +EEG H F IR
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRMIHGFMREIR 333
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 145/283 (51%), Gaps = 1/283 (0%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F +V N L+ MY K + +A ++F M R+VISW+ +I+ Q AL+
Sbjct: 334 FDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLH 393
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
LM ++ + ++V A+ CA+ G+ IH + SG++ + + N +++MYG C
Sbjct: 394 LMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCK 453
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSY-CQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
A VF A R+ +SW +++++Y Q L +F + G S + L
Sbjct: 454 STDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAAL 513
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA +L G +H + + LE + VA ++N+YAK L LA ++F + LPD+
Sbjct: 514 SACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVI 573
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+W+ +I +AQ G A + + F +M G +P++VTF V+ A
Sbjct: 574 SWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSA 616
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
++ +L AD + G+++H+ I K F+ + ++ Y C L ++ FD M
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI-SSDIPAIEWGK 399
D ++W LI H +A+ L + M EG P + +L S+D +E G+
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
+ H + +S+ + + L+ MY KC + DARKVFD + K +V WN M+ YAQ
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+A++++ M +K TFIGVL AC
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDAC 211
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 129/259 (49%), Gaps = 10/259 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGF-SQIGMPEV 59
++ SG +V+ N +L MY +DA ++F M R+ +SW+A+I+ + +Q +
Sbjct: 430 IVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSE 489
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL F+ M P+ ++V A+SACA++ GK +H R+ +GLE N V+N ++N
Sbjct: 490 ALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLN 549
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY K G L A+ +F + ISW ++S++ Q G L+ F G ++ +
Sbjct: 550 MYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVT 609
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG-----LINLYAKCEKLDLASRV 234
SV+ AC+ G +K G+Q L +F +++L A+ KLD A +
Sbjct: 610 FVSVVSACSHGGLVKDGVQ---LFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKF 666
Query: 235 FSNIQL-PDLTAWSALIGG 252
+ L PD S ++G
Sbjct: 667 IAAAPLKPDRVIHSTMLGA 685
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y+++L++ +D +++ GK+ H I K D +G LV MY CG L DA+ FD +
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC-VHIGLVEEGW 500
++ ++W ++ + Q G +AL ++ MQ + P + F+ VL AC L+EEG
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120
Query: 501 HYF-----NSMIRDHGISPRMDHI 519
+M DH +S + H+
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHM 144
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 199/653 (30%), Positives = 341/653 (52%), Gaps = 56/653 (8%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+ +TYN ++ Y+ ++ + A+K+F++MP+R++ISW+ ++SG+ + G A F M
Sbjct: 90 STVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP 149
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
E + ++ N +++ + + G +
Sbjct: 150 ----EKDVVSW-----------------------------------NAMLSGFAQNGFVE 170
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ +FD L +N ISW LLS+Y Q G ++F K I ++C ++G
Sbjct: 171 EARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLF--DSKMDWEIVSWNC--LMGGYV 226
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L SL + + DK +I YA+ L A R+F + + D+ AW+A
Sbjct: 227 RKKRLD---DARSLFDRMPVR-DKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTA 282
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
++ G+ Q G EA +F +M +EV+++ ++ + ++ R+L +
Sbjct: 283 MVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMPSRN 338
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
SS+ NT++ Y++C ++++ FDEM + D +SW A+I+G+ S EA+ L
Sbjct: 339 TSSW----NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFI 394
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M +G N + L+ ++I A+E GKQ H +VK GF + + G+AL+ MY KCG
Sbjct: 395 KMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCG 454
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ +A VF+ ++ K++VSWNTM+ GYA+HG G+EAL ++ M+ IKP+D T +GVLS
Sbjct: 455 SIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLS 513
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H GLV++G YFNSM +++GI+ H ++ L G+ A +KS P P+
Sbjct: 514 ACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDA 573
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
W LL + H D LG AAEK+ +P+++ +++LSN+YA + W E ++R M
Sbjct: 574 ATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKM 633
Query: 609 KEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
++K +KK G SW E+QNK H F+ + + ++ + +L + L G+V
Sbjct: 634 RDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFV 686
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GF I N LL MY K I +A +F+++ E++++SW+ +I+G+++ G + A
Sbjct: 431 LVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEA 490
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F M + +P+ T VG +SAC+ G G E MY++ G+ N+ C+I+
Sbjct: 491 LALFESMKMTI-KPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMID 549
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHG 161
+ G+ G L A + ++ +W +LL + +HG
Sbjct: 550 LLGRAGRLDEALNLMKSMPFYPDAATWGALLGA-----SRIHG 587
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 129/286 (45%), Gaps = 29/286 (10%)
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
ES + + + D+V WN I+ ++ A+ + M + TY+ +++
Sbjct: 47 ESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGM----RRRSTVTYNAMISGYL 102
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
+ ++ + + D +++ + ++ Y K G L+ AR +F+ + K++VSWN
Sbjct: 103 SNNKFDCARK----VFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNA 158
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
ML G+AQ+G EA +I+ M + N+ ++ G+LSA V G +E+ F+S
Sbjct: 159 MLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDS----- 209
Query: 511 GISPRMD-HIASVVHLFACRGQTRR---AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVL 566
+MD I S L + +R A P+ +K+ W +++G + L
Sbjct: 210 ----KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR-DKISWNIMITGYAQNGLLSE 264
Query: 567 GRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
R E++ D A + + + + M DE ++ + M EK+
Sbjct: 265 ARRLFEEL---PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKN 307
>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 187/555 (33%), Positives = 306/555 (55%), Gaps = 14/555 (2%)
Query: 120 MYGKCGLLSSAQFVFD--ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
MY KC ++ A V + A RN ++ +L+S + G GL + R++GV +
Sbjct: 1 MYAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDK 60
Query: 178 FSCASVL-GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
++ ++ G C V+ +V +IH LV K L+ D +V L++ Y K E + A +F
Sbjct: 61 YTFPCLIKGLCEVMEVFQVK-KIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFD 119
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
I D+ W++++ GYAQ+G+ EA+ + +M G++ S+ T S VL FA +
Sbjct: 120 EIPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDN 179
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI-AGHL 355
GR +H +IKMGF S V N ++D Y KC + ++L+ F+ M+E D+ SWN+++ A L
Sbjct: 180 GRLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANEL 239
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS--- 412
S H G + L ML +G +L T + IL S + A+ G++ H ++ GF
Sbjct: 240 CSDHDG-TLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGE 298
Query: 413 -----NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
N+ +AL+DMYAKCG + DA VF ++S+++ SWN M++GY HG G EAL +
Sbjct: 299 SENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYM 358
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA 527
+S M ++ +KPN+ TF+GVL AC H G + +G + M HG+ P + H V+ +
Sbjct: 359 FSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLG 418
Query: 528 CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIM 587
GQ AY+ + PI+ N VVWR LL+ C+ + ++ L AA+K+ +P +++
Sbjct: 419 RAGQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLAEVAAQKVFELNPAHCGNYVL 478
Query: 588 LSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEV 647
+SN Y A + E +R M+++ +KK GCSW EL+N M+ F + ++
Sbjct: 479 MSNAYVAAGRYQEVLDIRHTMRQQDVKKTPGCSWIELKNGMNTFINGDRNHPEARLIYPE 538
Query: 648 MNQLSVHLFDGGYVP 662
++ L+ H+ + GYVP
Sbjct: 539 LHLLAAHIREHGYVP 553
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 135/553 (24%), Positives = 235/553 (42%), Gaps = 57/553 (10%)
Query: 19 MYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNY 76
MY K +++N A + + + RNV +++ALISGF G+P+ L + M + P+
Sbjct: 1 MYAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDK 60
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
YT+ + + K+IHG + + GL+L+ +V + L++ Y K L+ A+ +FD
Sbjct: 61 YTFPCLIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDE 120
Query: 137 SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
+R+ + W S+++ Y Q G L + + GV +S+F+ + VL A G+ G
Sbjct: 121 IPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNG 180
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
+H + K + V LI++Y KC + A +F + D+ +W++++
Sbjct: 181 RLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELC 240
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF-----SS 311
+ LF +M G+ VT + +L A + + + GR++H +I GF S
Sbjct: 241 SDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESE 300
Query: 312 FTF---VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
+ N ++D Y+KC + ++ F M D SWN +I G+ + EA+ +
Sbjct: 301 NMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMFS 360
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
DM G PN T+ +L S I G K +K G + + ++DM +
Sbjct: 361 DMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRA 420
Query: 428 GRLNDARKVFDHLS-SKNLVSWNTMLV--------------------------------- 453
G+L +A K+ + N V W +L
Sbjct: 421 GQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLAEVAAQKVFELNPAHCGNYVLMS 480
Query: 454 -GYAQHGLGREALEIYSMMQENKIKPND-----------NTFIGVLSACVHIGLVEEGWH 501
Y G +E L+I M++ +K NTFI L+ H
Sbjct: 481 NAYVAAGRYQEVLDIRHTMRQQDVKKTPGCSWIELKNGMNTFINGDRNHPEARLIYPELH 540
Query: 502 YFNSMIRDHGISP 514
+ IR+HG P
Sbjct: 541 LLAAHIREHGYVP 553
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 8/206 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI GF V N L+ MY K + DA ++F+ M E+++ SW++++S +
Sbjct: 187 MIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELCSDHDGT 246
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL--------ELNSH 112
L F M+ ++ + T + AC+ G+EIHG M +G N
Sbjct: 247 LRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESENMYNLQ 306
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
N L++MY KCG + A VF R++ SW ++ Y G L +F KSG
Sbjct: 307 TINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMFSDMCKSG 366
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQ 198
+ +E + VL AC+ G + G++
Sbjct: 367 LKPNEITFVGVLLACSHAGFISQGIK 392
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 1 MITSGFHP--------NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFS 52
MI +GF N+ T N L+ MY K + DA +F M R+ SW+ +I G+
Sbjct: 288 MIVNGFVKDGESENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYG 347
Query: 53 QIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM-YRSGLELNS 111
G AL F M L+PN T+VG + AC+ G G + G M + G+
Sbjct: 348 MHGYGNEALYMFSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTI 407
Query: 112 HVSNCLINMYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQ 154
C+I+M G+ G L A + ++ N + W +LL++ CQ
Sbjct: 408 QHYTCVIDMLGRAGQLEEAYKLAVTMPIQTNPVVWRALLAA-CQ 450
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 187/667 (28%), Positives = 351/667 (52%), Gaps = 8/667 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V+ L+ +Y ++ + F + +N+ SW++++S + + G +
Sbjct: 74 LLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDS 133
Query: 61 LN-YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
++ L+ + P++YT+ + AC S D G+++H + + G E + +V+ LI+
Sbjct: 134 MDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEHDVYVAASLIH 190
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y + G + A VF R+ SW +++S +CQ G L++ + V + +
Sbjct: 191 LYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVT 250
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+S+L CA ++ G+ +H V K LE D FV+ LIN+Y+K +L A RVF ++
Sbjct: 251 VSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGME 310
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ DL +W+++I Y Q A+ F +M G+ P +T + F + + GR
Sbjct: 311 VRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRA 370
Query: 300 LHSLIIKMGFSSFTFV-ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H +++ + V N +++ Y+K ++ + F+++ DV+SWN LI G+ +
Sbjct: 371 VHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNG 430
Query: 359 HYGEAIELLKDMLFEGH--CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
EAI+ +M+ EG PN T+ +IL S + A++ G + H ++K +V +
Sbjct: 431 LASEAIDAY-NMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFV 489
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ L+DMY KCGRL DA +F + + V WN ++ HG G +AL+++ M+ + +
Sbjct: 490 ATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGV 549
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
K + TF+ +LSAC H GLV+E F++M +++ I P + H +V LF G +AY
Sbjct: 550 KADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAY 609
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+ + PI+ + +W LL+ C+ H + LG +A++++L D E+ +++LSN+YA
Sbjct: 610 NLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVG 669
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W+ KVR + +++ L+K G S + + + F + Q +++E + L+ +
Sbjct: 670 KWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMK 729
Query: 657 DGGYVPD 663
GYVPD
Sbjct: 730 SLGYVPD 736
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 236/418 (56%), Gaps = 6/418 (1%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
K++H + G + + L+ +Y G LS + F +N SW S++S+Y +
Sbjct: 67 AKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVR 126
Query: 155 CGEHVHGLK-IFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
G + + + L SGV ++ VL AC L + G ++H V K E D +
Sbjct: 127 RGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEHDVY 183
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
VA LI+LY++ +++A +VF ++ + D+ +W+A+I G+ Q G EA+ + +M +
Sbjct: 184 VAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEE 243
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ VT S +L A + +GG +H +IK G S FV+N +++ YSK L+++
Sbjct: 244 VKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQ 303
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
+ FD M+ D+VSWN++IA + + A+ K+MLF G P+L T ++ +I +
Sbjct: 304 RVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLS 363
Query: 394 AIEWGKQTHCCIVK-PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
G+ H +V+ + ++VIG+ALV+MYAK G ++ AR VF+ L S++++SWNT++
Sbjct: 364 DRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLI 423
Query: 453 VGYAQHGLGREALEIYSMMQENK-IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
GYAQ+GL EA++ Y+MM+E + I PN T++ +L A H+G +++G +I++
Sbjct: 424 TGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKN 481
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 164/298 (55%), Gaps = 4/298 (1%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
N+ V Q+H+L+ D + L+ LYA L L+S F +IQ ++ +W++++
Sbjct: 63 NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVS 122
Query: 252 GYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
Y + G+ +++D ++ S SG+ P TF VL A + + G ++H ++KMGF
Sbjct: 123 AYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFE 179
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
+VA +++ YS+ +E + K F +M DV SWNA+I+G + + EA+ +L M
Sbjct: 180 HDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRM 239
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
E + T S++L I + + G H ++K G +S+V + +AL++MY+K GRL
Sbjct: 240 KTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRL 299
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
DA++VFD + ++LVSWN+++ Y Q+ AL + M ++P+ T + + S
Sbjct: 300 QDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLAS 357
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 6/164 (3%)
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
I KQ H ++ G +VV+ + LV +YA G L+ + F H+ KN+ SWN+M+
Sbjct: 64 INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSA 123
Query: 455 YAQHGLGREALE-IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
Y + G R++++ + ++ + ++P+ TF VL AC+ + E+ + M +H +
Sbjct: 124 YVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCWVLKMGFEHDVY 183
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
AS++HL++ G A++ P+ + W ++SG
Sbjct: 184 V----AASLIHLYSRFGAVEVAHKVFVDMPVR-DVGSWNAMISG 222
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 172/483 (35%), Positives = 275/483 (56%), Gaps = 3/483 (0%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L +C +K G Q+H+ V FD +A L+NLY C+ L A +F I
Sbjct: 79 ASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK 138
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+ LI GYA G A+ L+ +MF GL+P TF +VL A A + GR++
Sbjct: 139 HNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREI 198
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +++ G+ FV ++D Y+KC + + + FD++ D V WN+++A + + H
Sbjct: 199 HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHP 258
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ L +M+ G P T ++ S+D A+ G++ H + F+S+ + +AL
Sbjct: 259 DACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTAL 318
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI-KPN 479
VDMYAKCG + AR +F+ L K +VSWN M+ GYA HG EAL+++ M N++ KP+
Sbjct: 319 VDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM--NRVAKPD 376
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+GVLSAC H GL+EEGW +F +MIRD+ I P + H +V L G+ AY I
Sbjct: 377 HITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLI 436
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ P+ VW LL+ CK H ++ LG A E+++ +P+D +++LSN+YA+A W+
Sbjct: 437 MQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWE 496
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
AK+RK+M ++ LKK CSW E++NK+H F + + +++ + ++ + + G
Sbjct: 497 GVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAG 556
Query: 660 YVP 662
Y P
Sbjct: 557 YSP 559
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 178/363 (49%), Gaps = 2/363 (0%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L P Y Y + +C +R + GK++H ++ +G ++ ++ L+N+Y C LSSA+
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
+FD + N W L+ Y G + ++++ G+ F+ VL ACA L
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
++ G +IH V + E D FV LI++YAKC + A VF I + D W++++
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLA 250
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
Y+Q G + L +M +GL P+E T + A AD GR+LH L + F S
Sbjct: 251 AYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFES 310
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V ++D Y+KC + + F+ + VVSWNA+I G+ H EA++L ++M
Sbjct: 311 HDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMN 370
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRL 430
P+ T+ +L+ S +E G +++ D V + +VD+ GRL
Sbjct: 371 RVAK-PDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRL 429
Query: 431 NDA 433
++A
Sbjct: 430 DEA 432
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 151/284 (53%), Gaps = 1/284 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+GF + + L+ +Y ++ A+ LFD +P+ N+ W+ LI G++ G E A+
Sbjct: 104 AGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQL 163
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+ M L P+ +T+ + ACA+ G+EIH + ++G E + V LI+MY K
Sbjct: 164 YYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAK 223
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + SA+ VFD L R+++ W S+L++Y Q G L + +G+ +E + +
Sbjct: 224 CGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTA 283
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
+ A A L G ++H L ++ E V L+++YAKC + +A +F + + +
Sbjct: 284 ISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRV 343
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+W+A+I GYA G A EA+DLF +M + P +TF VL A
Sbjct: 344 VSWNAMITGYAMHGHATEALDLFEEM-NRVAKPDHITFVGVLSA 386
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 152/297 (51%), Gaps = 14/297 (4%)
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
S+ L P+ ++ +L + K G+QLH+ + GF T +A +++ Y C+ L
Sbjct: 68 STCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLS 127
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
+ FD + +H++ WN LI G+ + Y A++L M G P+ +T+ +L +
Sbjct: 128 SARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACA 187
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
+ AIE G++ H +V+ G++ +V +G+AL+DMYAKCG + AR+VFD + ++ V WN+
Sbjct: 188 ALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNS 247
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
ML Y+Q+G L + S M ++P + T + +SA + +G H
Sbjct: 248 MLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGREL-------H 300
Query: 511 GISPRMDHIA------SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
G+S R + + ++V ++A G R A + ++ V W +++G H
Sbjct: 301 GLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVK-RVVSWNAMITGYAMH 356
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 126/255 (49%), Gaps = 9/255 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ +V L+ MY K + A+++FD++ R+ + W+++++ +SQ G P+
Sbjct: 202 VVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDAC 261
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ MV L P T V A+SA A G+E+HG +R E + V L++M
Sbjct: 262 LSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDM 321
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE-FS 179
Y KCG + A+ +F+ + +SW ++++ Y G L +F + VA + +
Sbjct: 322 YAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLF--EEMNRVAKPDHIT 379
Query: 180 CASVLGACAVLGNLKVG-MQIHSLV--FKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
VL AC+ G L+ G M +++ +K + M ++L +LD A +
Sbjct: 380 FVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCM--VDLLGHSGRLDEAYNLIM 437
Query: 237 NIQ-LPDLTAWSALI 250
++ LPD W AL+
Sbjct: 438 QMKVLPDSGVWGALL 452
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 187/584 (32%), Positives = 325/584 (55%), Gaps = 12/584 (2%)
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
G+ GK +H R+ R+ + N LI +Y KCG L A+ VFDA RN +S L+
Sbjct: 30 GELSLGKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
S Y G H L + R + ++E+ +S + A A + + +G Q H K L
Sbjct: 89 SGYASSGRHRDALALL---RVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLA 145
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
+V ++++Y +C +D A +VF N+ ++ A++++I G+ G+ + + M
Sbjct: 146 EHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSM 205
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
+ V++ VLG A KE + G Q+H+ +K +V + ++D Y KC+
Sbjct: 206 VRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFP 265
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
E+ + F+ + E ++VSW A++ + + + +A++L DM EG PN +TY+ LN
Sbjct: 266 HEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSC 325
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
+ + ++ G C +K G + + +AL++MY+K G + DAR+VF + +++VSWN
Sbjct: 326 AGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWN 385
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
++++GYA HG REA+E + M + P+ TFIGVLSAC +GLV+EG++Y N M+++
Sbjct: 386 SIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKE 445
Query: 510 HGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRY 569
G+ P +H +V L G+ A FI+S+ I + V WR LLS C+ +++ LG
Sbjct: 446 VGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHR 505
Query: 570 AAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMH 629
AE+I P+D +++LSN+YA+AN WD KVR++M+E ++K+ G SW ++ +++H
Sbjct: 506 VAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVH 565
Query: 630 YFST--SRFAQFQGI--DLHEVMNQLSVHLFDGGYVPDPIYSSH 669
F++ + + I L E+++++ V GYVP+ + H
Sbjct: 566 VFTSEDKKHPYMEQITKKLQELIDKIKVI----GYVPNIAVALH 605
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 239/484 (49%), Gaps = 27/484 (5%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V+ YN+L+ +YVK R+ A+++FD MP RN +S + L+SG++ G AL R+
Sbjct: 49 DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALLRV-- 106
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
N Y AV+A A G++ HG ++GL + +V + +++MY +C +
Sbjct: 107 -ADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMD 165
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A VFD N ++ S+++ + G+ I ++ S +VLG CA
Sbjct: 166 EAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCA 225
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ +G Q+H+ K LE + +V L+++Y KC+ A+RVF + ++ +W+A
Sbjct: 226 STKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTA 285
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
++ Y Q +A+ LF+ M G+ P+E T++ L + A + G L + +K G
Sbjct: 286 IMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTG 345
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
V N +++ YSK +E++ + F M DVVSWN++I G+ EA+E
Sbjct: 346 HWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFH 405
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWG--------KQTHCCIVKPGFDSNVVIGSAL 420
DMLF P+ T+ +L+ + + ++ G K+ VKPG + + +
Sbjct: 406 DMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVG---VKPGKEHY----TCM 458
Query: 421 VDMYAKCGRLNDARKVFD-HLSSKNLVSWNTMLVG---YAQHGLGREALEIYSMMQENKI 476
V + + GRL++A + + + ++V+W ++L Y +GLG E Q ++
Sbjct: 459 VGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAE-----QIFQL 513
Query: 477 KPND 480
KP D
Sbjct: 514 KPKD 517
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 189/358 (52%), Gaps = 6/358 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
HP V + +L MY + + +++A K+FD + NV +++++I+GF G + + + R
Sbjct: 147 HPYVCSA--VLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRS 204
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
MV V + ++ +YV + CAS + G ++H + + LELN +V + L++MYGKC
Sbjct: 205 MVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDF 264
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
A VF+ E+N +SW +++++Y Q L++FL GV +EF+ A L +
Sbjct: 265 PHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNS 324
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA L LK G + + K V L+N+Y+K ++ A RVF ++ D+ +W
Sbjct: 325 CAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSW 384
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+++I GYA G+A EA++ F M + +PS VTF VL A A + G ++++K
Sbjct: 385 NSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMK 444
Query: 307 -MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD--EHDVVSWNALIAGHLASCHYG 361
+G ++ + L+E+ + F E + DVV+W +L++ +YG
Sbjct: 445 EVGVKPGKEHYTCMVGLLCRVGRLDEA-ERFIESNCIGTDVVAWRSLLSSCQVYRNYG 501
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 199/631 (31%), Positives = 323/631 (51%), Gaps = 39/631 (6%)
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
C T+ + AC ++ D +GK +H ++S + ++++SN +Y KCG L +
Sbjct: 3 CTFPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHN 62
Query: 130 AQF-------------------------------VFDASLERNSISWVSLLSSYCQCGEH 158
AQ VFD + + +S+ +L+++Y GE
Sbjct: 63 AQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGEC 122
Query: 159 VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
L++F R+ + F+ + V+ AC ++ + Q+H V C + V +
Sbjct: 123 RPALRLFAEVRELRFGLDGFTLSGVIIACG--DDVGLVRQLHCFVVVCGYDCYASVNNAV 180
Query: 219 INLYAKCEKLDLASRVFSNIQL---PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
+ Y++ L+ A RVF + D +W+A+I Q + EA++LF +M GL
Sbjct: 181 LACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLK 240
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL-LEESLK 334
T + VL AF VK+ +GG Q H ++IK GF + V + ++D YSKC + E K
Sbjct: 241 VDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRK 300
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
F+E+ D+V WN +I+G E I ++M G P+ ++ + + S++
Sbjct: 301 VFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLS 360
Query: 394 AIEWGKQTHCCIVKPGFDSN-VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+ GKQ H +K N V + +ALV MY+KCG ++DAR+VFD + N+VS N+M+
Sbjct: 361 SPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMI 420
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
GYAQHG+ E+L ++ +M + I PN TFI VLSACVH G VEEG YFN M I
Sbjct: 421 AGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRI 480
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
P +H + ++ L G+ + A I++ P P + W LL C+ H ++ L AA
Sbjct: 481 EPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAAN 540
Query: 573 KILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
+ L +P + + ++MLSN+YA A W+E A V+++M+E+ +KK GCSW E+ K+H F
Sbjct: 541 EFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFV 600
Query: 633 TSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ ++H M ++ + GYVPD
Sbjct: 601 AEDTSHPMIKEIHVYMGEILRKMKQAGYVPD 631
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 240/465 (51%), Gaps = 18/465 (3%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+PNV +YN L+ Y K S I+ A+++FDE+P+ +++S++ LI+ ++ G AL F
Sbjct: 72 YPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAE 131
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
+ + +T G + AC D +++H + G + + V+N ++ Y + G
Sbjct: 132 VRELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGF 189
Query: 127 LSSAQFVFDASLE---RNSISWVSLLSSYCQCGEHVHGLKIFLLSR---KSGVAISEFSC 180
L+ A+ VF E R+ +SW +++ + CG+H GL+ L R + G+ + F+
Sbjct: 190 LNEARRVFREMGEGGGRDEVSWNAMIVA---CGQHREGLEAVELFREMVRRGLKVDMFTM 246
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR-VFSNIQ 239
ASVL A + +L GMQ H ++ K + V GLI+LY+KC + R VF I
Sbjct: 247 ASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIA 306
Query: 240 LPDLTAWSALIGGYAQLGKACE-AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
PDL W+ +I G++Q E I F +M +G P + +F V A +++ G+
Sbjct: 307 APDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGK 366
Query: 299 QLHSLIIKMGFS-SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
Q+H+L IK + V N ++ YSKC + ++ + FD M EH++VS N++IAG+
Sbjct: 367 QVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQH 426
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF--DSNVV 415
E++ L + ML + PN T+ +L+ +E G Q + ++K F +
Sbjct: 427 GVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEG-QKYFNMMKERFRIEPEAE 485
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
S ++D+ + G+L +A ++ + + + + W T+L +HG
Sbjct: 486 HYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHG 530
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 6/293 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE---RNVISWSALISGFSQIGMP 57
++ G+ N +L Y + +N+A+++F EM E R+ +SW+A+I Q
Sbjct: 165 VVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREG 224
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
A+ FR MV L+ + +T ++A D G + HG M +SG NSHV + L
Sbjct: 225 LEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGL 284
Query: 118 INMYGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGE-HVHGLKIFLLSRKSGVAI 175
I++Y KC G + + VF+ + + W +++S + Q + G+ F + +G
Sbjct: 285 IDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHP 344
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF-VAMGLINLYAKCEKLDLASRV 234
+ S V AC+ L + VG Q+H+L K + +++ V L+ +Y+KC + A RV
Sbjct: 345 DDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRV 404
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
F + ++ + +++I GYAQ G E++ LF M + P+ +TF VL A
Sbjct: 405 FDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSA 457
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 144/286 (50%), Gaps = 12/286 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSR-INDAQKLFDEMPERNVISWSALISGFSQI-GMPE 58
MI SGFH N + L+ +Y K + + + +K+F+E+ +++ W+ +ISGFSQ + E
Sbjct: 269 MIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSE 328
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCL 117
+ FR M P+ ++V SAC++ GK++H +S + N V+N L
Sbjct: 329 DGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNAL 388
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+ MY KCG + A+ VFD E N +S S+++ Y Q G V L++F L + +A +
Sbjct: 389 VAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNT 448
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ +VL AC G ++ G + +++ F+ E + + M I+L + KL A R+
Sbjct: 449 ITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCM--IDLLGRAGKLKEAERI 506
Query: 235 FSNIQL-PDLTAWSALIGGYAQLGK---ACEAIDLFVKMFSSGLMP 276
+ P W+ L+G + G A +A + F+++ P
Sbjct: 507 IETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAP 552
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 293/558 (52%), Gaps = 24/558 (4%)
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
AQ V +S++W+ ++ Y G H L F L R G++ S+L A +
Sbjct: 29 AQIVKTTKATPHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTL 88
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE----------------------K 227
+ + +H+ V + FD + A L+N+Y+K K
Sbjct: 89 FKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVK 148
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+D ++F + + D+ +W+ +I G AQ G EA+++ +M L P T S +L
Sbjct: 149 IDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPI 208
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
F + G+++H I+ GF F+ ++++D Y+KC +E S+ F + D +SW
Sbjct: 209 FTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISW 268
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
N++IAG + + + + + + ML E P ++S+++ + + A+ GKQ H I++
Sbjct: 269 NSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIR 328
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS--SKNLVSWNTMLVGYAQHGLGREAL 465
GFD N I S+L+DMYAKCG + AR +F+ + +++VSW +++G A HG +A+
Sbjct: 329 LGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAV 388
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
++ M + +KP F+ VL+AC H GLV+EGW YFNSM RD G++P ++H A+V L
Sbjct: 389 SLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADL 448
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
G+ AY+FI + EP VW LL+ C+ HK++ L KIL DP + AH
Sbjct: 449 LGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAH 508
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLH 645
+++SN+Y+ A W + AK+R M++ LKK CSW E+ NK+H F + ++
Sbjct: 509 VIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKIN 568
Query: 646 EVMNQLSVHLFDGGYVPD 663
E +N L + GYV D
Sbjct: 569 EALNILLEQMEKEGYVLD 586
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 195/399 (48%), Gaps = 34/399 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFS----------------------RINDAQKLFDEMPE 38
+I GFH ++ T N L+ MY KF +I+ +KLFD MP
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161
Query: 39 RNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEI 98
R+V+SW+ +I+G +Q GM E ALN + M L P+ +T + + GKEI
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221
Query: 99 HGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
HG R G + + + + LI+MY KC + + F R++ISW S+++ Q G
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRF 281
Query: 159 VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
GL F K V + S +SV+ ACA L L +G Q+H+ + + + +KF+A L
Sbjct: 282 DQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSL 341
Query: 219 INLYAKCEKLDLASRVFSNIQL--PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
+++YAKC + +A +F+ I++ D+ +W+A+I G A G A +A+ LF +M G+ P
Sbjct: 342 LDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKP 401
Query: 277 SEVTFSYVLGAFAD---VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
V F VL A + V E G + +S+ G + V D + LEE+
Sbjct: 402 CYVAFMAVLTACSHAGLVDE--GWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAY 459
Query: 334 KTFDEMDEHDVVS-WNALIAGHLASCHYGEAIELLKDML 371
M E S W+ L LA+C + IEL + ++
Sbjct: 460 DFISNMGEEPTGSVWSTL----LAACRAHKNIELAEKVV 494
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 206/712 (28%), Positives = 358/712 (50%), Gaps = 62/712 (8%)
Query: 20 YVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTY 79
Y+ DA + + + + W+ L+ + G + A+ M+ +P+++T
Sbjct: 93 YLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTL 152
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
A+ AC G+ +HG + +G E N V N L+ MY +CG L A VFD
Sbjct: 153 PYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITR 212
Query: 140 R---NSISWVSLLSSYCQCGEHVHGLKIF-----LLSRKSGVAISEF-SCASVLGACAVL 190
+ + ISW S+++++ + L++F ++ K+ S+ S ++L ACA L
Sbjct: 213 KGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASL 272
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW---- 246
L +IHS + D FV LI+ YAKC ++ A +VF+ ++ D+ +W
Sbjct: 273 KALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMV 332
Query: 247 -------------------------------SALIGGYAQLGKACEAIDLFVKMFSSGLM 275
SA+I GYAQ G + EA+D F +M G
Sbjct: 333 TGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSE 392
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT------------FVANTVLDFY 323
P+ VT +L A A + G ++H+ +K S V N ++D Y
Sbjct: 393 PNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMY 452
Query: 324 SKCELLEESLKTFDEMD--EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC--PNL 379
SKC + + FD + E +VV+W +I G+ +A+++ +M+ + + PN
Sbjct: 453 SKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNA 512
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNV-VIGSALVDMYAKCGRLNDARKVF 437
YT S IL + + A+ GKQ H + + ++ +V + + L+DMY+KCG ++ AR VF
Sbjct: 513 YTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVF 572
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D + +N VSW +M+ GY HG G+EAL+I+ MQ+ P+D +F+ +L AC H G+V+
Sbjct: 573 DSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVD 632
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+G +YF+ M RD+ + +H A V+ L A G+ +A++ I+ P+EP+ V+W LLS
Sbjct: 633 QGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSA 692
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
C+ H ++ L YA K+++ E+ ++ ++SN+YA A W + A++R++MK+ +KK
Sbjct: 693 CRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRP 752
Query: 618 GCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
GCSW + + F + +++ ++ +L + GYVP+ ++ H
Sbjct: 753 GCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALH 804
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 149/543 (27%), Positives = 251/543 (46%), Gaps = 76/543 (13%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER---NVISWSALISGFSQIGMPEVA 60
+GF NV N L+ MY + + DA +FDE+ + +VISW+++++ + P A
Sbjct: 178 NGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTA 237
Query: 61 LNYFRLMVCCVLEP------NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
L F M V E + + V + ACAS KEIH R+G ++ V
Sbjct: 238 LELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVC 297
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N LI+ Y KCG ++ A VF+ ++ +SW ++++ Y Q G ++F RK +
Sbjct: 298 NALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIP 357
Query: 175 I------------SEFSCA-----------------------SVLGACAVLGNLKVGMQI 199
+ ++ C+ S+L ACA LG L GM+I
Sbjct: 358 LDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEI 417
Query: 200 HSLVF-KCALEFDK-----------FVAMGLINLYAKCEKLDLASRVFSNI--QLPDLTA 245
H+ KC L D V LI++Y+KC A +F +I + ++
Sbjct: 418 HAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVT 477
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSS--GLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W+ +IGGYAQ G + +A+ +F +M S + P+ T S +L A A + G+Q+H+
Sbjct: 478 WTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAY 537
Query: 304 IIKMG--FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ + S FVAN ++D YSKC ++ + FD M + + VSW ++++G+
Sbjct: 538 VTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGK 597
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA-- 419
EA+++ M G P+ ++ +L S ++ G + I++ +D V+ SA
Sbjct: 598 EALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG-LNYFDIMRRDYD---VVASAEH 653
Query: 420 ---LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREAL-EIYSMM 471
++D+ A+CGRL+ A K + + V W +L H L AL ++ +M
Sbjct: 654 YACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMK 713
Query: 472 QEN 474
EN
Sbjct: 714 AEN 716
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 230/506 (45%), Gaps = 62/506 (12%)
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
++ Y CG A V + ++ W L+ + + G + + ++G
Sbjct: 89 VVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPD 148
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
F+ L AC L + G +H L+ E + FV L+ +Y++C L+ AS VF
Sbjct: 149 HFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFD 208
Query: 237 NIQ---LPDLTAWSALIGGYAQLGKACEAIDLFVKMF------SSGLMPSEVTFSYVLGA 287
I + D+ +W++++ + + A++LF +M ++ ++ +L A
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPA 268
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
A +K +++HS I+ G + FV N ++D Y+KC + +++K F+ M+ DVVSW
Sbjct: 269 CASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSW 328
Query: 348 NALIAGHLASCHYGEAIELLKD-----------------------------------MLF 372
NA++ G+ S ++G A EL ++ M+
Sbjct: 329 NAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMIL 388
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS------------NVVIGSAL 420
+G PN T ++L+ + + A+ G + H +K S ++++ +AL
Sbjct: 389 DGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNAL 448
Query: 421 VDMYAKCGRLNDARKVFDHLS--SKNLVSWNTMLVGYAQHGLGREALEIYSMM--QENKI 476
+DMY+KC AR +FD + +N+V+W M+ GYAQ+G +AL+I+S M + +
Sbjct: 449 IDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAV 508
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS-VVHLFACRGQTRRA 535
PN T +L AC H+ + G + R H P + +A+ ++ +++ G A
Sbjct: 509 APNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTA 568
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTH 561
S P + N+V W ++SG H
Sbjct: 569 RNVFDSMP-KRNEVSWTSMMSGYGMH 593
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/460 (28%), Positives = 219/460 (47%), Gaps = 86/460 (18%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG------ 55
I +G + N L+ Y K +NDA K+F+ M ++V+SW+A+++G++Q G
Sbjct: 286 IRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAF 345
Query: 56 ----------MP-------------------EVALNYFRLMVCCVLEPNYYTYVGAVSAC 86
+P + AL+ F+ M+ EPN T + +SAC
Sbjct: 346 ELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSAC 405
Query: 87 ASRGDARSGKEIHGRMYRSGL------------ELNSHVSNCLINMYGKCGLLSSAQFVF 134
AS G G EIH + L + V N LI+MY KC +A+ +F
Sbjct: 406 ASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIF 465
Query: 135 DA--SLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVL 190
D+ ERN ++W ++ Y Q G+ LKIF ++S+ VA + ++ + +L ACA L
Sbjct: 466 DSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHL 525
Query: 191 GNLKVGMQIHSLVFKCALEFDK---FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
L++G QIH+ V + E++ FVA LI++Y+KC +D A VF ++ + +W+
Sbjct: 526 AALRMGKQIHAYVTR-HHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWT 584
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+++ GY G+ EA+D+F KM +G +P +++F +L A + HS ++
Sbjct: 585 SMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACS-----------HSGMVDQ 633
Query: 308 GFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGH 354
G + F + V+D ++C L+++ KT EM E V W AL
Sbjct: 634 GLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVAL---- 689
Query: 355 LASCHYGEAIELLK---DMLFEGHCPNLYTYSNILNISSD 391
L++C +EL + + L N +Y+ I NI ++
Sbjct: 690 LSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYAN 729
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 160/336 (47%), Gaps = 10/336 (2%)
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
K + G++ Y C A V + W+ L+ + + G AI + +M
Sbjct: 83 KSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLR 142
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
+G P T Y L A ++ GR LH LI GF S FV N ++ YS+C LE+
Sbjct: 143 AGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLED 202
Query: 332 SLKTFDEMDEH---DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+ FDE+ DV+SWN+++A H+ + A+EL +M H S+I++I
Sbjct: 203 ASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISI 262
Query: 389 SSDIP------AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+ +P A+ K+ H ++ G ++ + +AL+D YAKCG +NDA KVF+ +
Sbjct: 263 VNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEF 322
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
K++VSWN M+ GY Q G A E++ M++ I + T+ V++ G +E
Sbjct: 323 KDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDA 382
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
F MI D G P I S++ A G + E
Sbjct: 383 FQQMILD-GSEPNSVTIISLLSACASLGALSQGMEI 417
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 29/262 (11%)
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG---------------FS 310
F+ + S+ +V+ ++ + + RQ+H II G
Sbjct: 16 FLSVASADCFGRDVSPTHFASLLKECRSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLP 75
Query: 311 SFTFVA-----NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
S ++V+ V+ Y C +++L + + V WN L+ H+ H AI
Sbjct: 76 SHSYVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIG 135
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
+ ML G P+ +T L ++P+ G+ H I GF+SNV + +ALV MY+
Sbjct: 136 VSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYS 195
Query: 426 KCGRLNDARKVFDHLSSK---NLVSWNTMLVGYAQHGLGREALEIYSMM------QENKI 476
+CG L DA VFD ++ K +++SWN+++ + + R ALE++S M +
Sbjct: 196 RCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNE 255
Query: 477 KPNDNTFIGVLSACVHIGLVEE 498
+ + + + +L AC + + +
Sbjct: 256 RSDIISIVNILPACASLKALPQ 277
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 193/595 (32%), Positives = 289/595 (48%), Gaps = 68/595 (11%)
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
A + + IS + + + H +++F G+ +V+ CA L L+
Sbjct: 33 AHILKTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQT 92
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP-------------- 241
G Q+H L D V L+++Y + + L A VF + P
Sbjct: 93 GKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFAR 152
Query: 242 ---------------------DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVT 280
+L +W+ +I G+ + G +A+ +F M GL P +
Sbjct: 153 KGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTS 212
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
S VL A D+ + G Q+H +IK G FV + ++D Y KC E F+EMD
Sbjct: 213 VSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMD 272
Query: 341 EHDVVSWNALIAG-----------------------------HLASCHYG----EAIELL 367
E DV + NAL+ G +ASC EA+EL
Sbjct: 273 EVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELF 332
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
++M EG PN T +L +I A+ GK HC ++ G ++V +GSAL+DMYAKC
Sbjct: 333 REMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKC 392
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
GR+ +R FD + ++NLVSWN+++ GYA HG EA+ I+ +MQ KP+ +F VL
Sbjct: 393 GRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVL 452
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC GL EEGW YF+SM R+HG+ RM+H + +V L G+ AY IK P EP+
Sbjct: 453 SACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPD 512
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
VW LLS C+ H + LG AA+++ +P + +I+LSN+YA MW E VR +
Sbjct: 513 SCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDM 572
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
M+ + LKK+ G SW E++NK+H + Q + E + +L+V + GYVP
Sbjct: 573 MRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVP 627
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 196/467 (41%), Gaps = 81/467 (17%)
Query: 42 ISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGR 101
IS I FS++ + F M+ + P+ + CA+ ++GK++H
Sbjct: 40 ISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCF 99
Query: 102 MYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA------------------------- 136
SGL L+S V + L++MY + L A+ VFD
Sbjct: 100 ALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKET 159
Query: 137 ----------SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+E N +SW ++S + + G ++ + +F G+ S +SVL A
Sbjct: 160 KELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPA 219
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA- 245
L +G+QIH V K L DKFV LI++Y KC S VF+ + D+ A
Sbjct: 220 VGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGAC 279
Query: 246 --------------------------------WSALIGGYAQLGKACEAIDLFVKMFSSG 273
W+++I +Q GK EA++LF +M G
Sbjct: 280 NALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEG 339
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ P+ VT +L A ++ + G+ H ++ G + +V + ++D Y+KC + S
Sbjct: 340 VKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASR 399
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
FD M ++VSWN+L+AG+ EAI + + M G P+ +++ +L+ +
Sbjct: 400 LCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGG 459
Query: 394 AIEWG-------KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
E G + H G ++ + S +V + + GRL +A
Sbjct: 460 LTEEGWFYFDSMSRNH------GVEARMEHYSCMVTLLGRSGRLEEA 500
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 187/436 (42%), Gaps = 76/436 (17%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP------------------------ 37
+ SG + + + LL MYV+F + DA+ +FD++P
Sbjct: 101 LVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETK 160
Query: 38 -----------ERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSAC 86
E N++SW+ +ISGF++ G A+ F+ M L+P+ + + A
Sbjct: 161 ELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAV 220
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC---------------------- 124
G +IH + + GL + V + LI+MYGKC
Sbjct: 221 GDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACN 280
Query: 125 ---------GLLSSAQFVFD--ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
GL+ +A VF ++ N +SW S+++S Q G+ + L++F + GV
Sbjct: 281 ALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGV 340
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+ + +L AC + L G H + + D +V LI++YAKC ++ LASR
Sbjct: 341 KPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRM-LASR 399
Query: 234 V-FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
+ F + +L +W++L+ GYA GK EAI++F M G P V+F+ VL A
Sbjct: 400 LCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGG 459
Query: 293 ETIGG-RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNAL 350
T G S+ G + + ++ + LEE+ +M E D W AL
Sbjct: 460 LTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGAL 519
Query: 351 IAGHLASCHYGEAIEL 366
L+SC ++L
Sbjct: 520 ----LSSCRVHNRVDL 531
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 35/285 (12%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G P+ + L+ MY K + ++ +F+EM E +V + +AL++G S+ G+ + A
Sbjct: 236 VIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNA 295
Query: 61 LNYFR--------------LMVCCV-------------------LEPNYYTYVGAVSACA 87
L F+ ++ C ++PN T + AC
Sbjct: 296 LEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACG 355
Query: 88 SRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVS 147
+ GK H R+G+ + +V + LI+MY KCG + +++ FD RN +SW S
Sbjct: 356 NIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNS 415
Query: 148 LLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG-MQIHSLVFKC 206
L++ Y G+ + IF L ++ G S VL AC G + G S+
Sbjct: 416 LMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNH 475
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALI 250
+E ++ L + +L+ A + + PD W AL+
Sbjct: 476 GVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALL 520
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 345/654 (52%), Gaps = 26/654 (3%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
++ +N + Y++ R N+A ++F MP + +S++ +ISG+ + G E+A F M
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
L ++ + + G AR EI E + N +++ Y + G +
Sbjct: 123 ERDL-VSWNVMIKGYVRNRNLGKARELFEIMP-------ERDVCSWNTMLSGYAQNGCVD 174
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ VFD E+N +SW +LLS+Y Q + +F S + A V C
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK---------SRENWALVSWNCL 225
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMG-LINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ G +K + + F ++ V+ +I YA+ K+D A ++F + D+ W+
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWT 285
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A++ GY Q EA +LF KM +EV+++ +L + + ++L ++
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCR 341
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
S++ NT++ Y++C + E+ FD+M + D VSW A+IAG+ S H EA+ L
Sbjct: 342 NVSTW----NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLF 397
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M EG N ++S+ L+ +D+ A+E GKQ H +VK G+++ +G+AL+ MY KC
Sbjct: 398 VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G + +A +F ++ K++VSWNTM+ GY++HG G AL + M+ +KP+D T + VL
Sbjct: 458 GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC H GLV++G YF +M +D+G+ P H A +V L G A+ +K+ P EP+
Sbjct: 518 SACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPD 577
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
+W LL + H + L AA+KI + +PE++ +++LSN+YA + W + K+R
Sbjct: 578 AAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVR 637
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
M++K +KK G SW E+QNK H FS + ++ + +L + + GYV
Sbjct: 638 MRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 691
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ N LLLMY K I +A LF EM ++++SW+ +I+G+S+ G EVA
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L +F M L+P+ T V +SAC+ G G++ M + G+ NS C+++
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGL---------KIFLLS- 168
+ G+ GLL A + + E ++ W +LL + VHG KIF +
Sbjct: 555 LLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA-----SRVHGNTELAETAADKIFAMEP 609
Query: 169 RKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
SG+ + + + G +G L+V M+
Sbjct: 610 ENSGMYVLLSNLYASSGRWGDVGKLRVRMR 639
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 12/182 (6%)
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
++ ++ + K + + D+ WN I+ ++ + EA+ + K M P + S
Sbjct: 44 TQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRM------PRWSSVS 97
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
IS + E+ P + ++V + ++ Y + L AR++F+ + +
Sbjct: 98 YNGMISGYLRNGEFELARKLFDEMP--ERDLVSWNVMIKGYVRNRNLGKARELFEIMPER 155
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
++ SWNTML GYAQ+G +A ++ M E ND ++ +LSA V +EE F
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLF 211
Query: 504 NS 505
S
Sbjct: 212 KS 213
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 192/632 (30%), Positives = 335/632 (53%), Gaps = 14/632 (2%)
Query: 13 YNHLLLMYVKF---SRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVC 69
+N LL Y S + A+++FDE+P + +SW++L++ G A + M
Sbjct: 29 WNQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHA 88
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
L + + A+ + A+ G ++ +SGL N ++ L+++Y KCG LS
Sbjct: 89 RGLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSD 148
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A+ VFD RN++SW +L++ Y + + +++FL ++ + + + A++L
Sbjct: 149 ARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEG 208
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
+ Q+H + K V I Y++C + R+F IQ DL +W+++
Sbjct: 209 PSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSM 268
Query: 250 IGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVK-ETIGGRQLHSLIIKM 307
+G YA G EA+ FV+M SG+ P +F+ V+ ++ + GR +HSL++K+
Sbjct: 269 LGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKI 328
Query: 308 GFSSFTFVANTVLDFYSKCE---LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG--- 361
G T V N ++ Y++ ++E++ K FD + D VSWN+++ G+ H+G
Sbjct: 329 GLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGY---SHHGLSS 385
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A+ + M E + + S L SD+ + G+Q H +++ GF SN + S+L+
Sbjct: 386 DALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLI 445
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
MY+KCG + DARK F+ + V WN+M+ GYAQHG + +++S M ++K+ +
Sbjct: 446 FMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHV 505
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ +L+A H GLV+EG NSM + I RM+H A V L+ GQ +A E I+S
Sbjct: 506 TFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVDLYGRAGQLDKAKELIES 565
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P +P+ +VW LL C+ H ++ L A + +P S +++LS++Y+ MW +
Sbjct: 566 MPFQPDAMVWMTLLGACRIHGNMELASDVASHLFVAEPRQHSTYVLLSSMYSGRGMWSDR 625
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
A V+K+MK + L K G SW E++N++H F+
Sbjct: 626 ATVQKVMKNRGLSKVPGWSWIEVKNEVHSFNA 657
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 239/468 (51%), Gaps = 13/468 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG NV + + LL +Y K R++DA+++FD MP RN +SW+ALI+G+++ P A+
Sbjct: 122 VKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAM 181
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M L P+ T+ ++ +++HG++ + G L V N I Y
Sbjct: 182 ELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAY 241
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSC 180
+CG + ++ +FD R+ ISW S+L +Y G ++ F+ + R+SGV +S
Sbjct: 242 SQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSF 301
Query: 181 ASVLGACAVLG-NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK---LDLASRVFS 236
SV+ C+ G + + G IHSLV K LE V +I +Y + + ++ A + F
Sbjct: 302 TSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFD 361
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
++ D +W++++ GY+ G + +A+ F M + + E S L + +D+
Sbjct: 362 SLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRL 421
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
GRQ+HSL+I+ GFSS FV+++++ YSKC ++ ++ K+F+E D+ V WN+++ G+
Sbjct: 422 GRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQ 481
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK----PGFDS 412
+L +ML + T+ +L S ++ G + + P
Sbjct: 482 HGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRME 541
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+ G VD+Y + G+L+ A+++ + + + + W T+L HG
Sbjct: 542 HYACG---VDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHG 586
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF N + L+ MY K + DA+K F+E + + + W++++ G++Q G +
Sbjct: 429 VIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTV 488
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM-YRSGLELNSHVSNCLIN 119
+ F M+ + ++ T+V ++A + G G EI M R + L C ++
Sbjct: 489 TDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVD 548
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
+YG+ G L A+ + ++ + +++ W++LL +
Sbjct: 549 LYGRAGQLDKAKELIESMPFQPDAMVWMTLLGA 581
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 194/643 (30%), Positives = 334/643 (51%), Gaps = 5/643 (0%)
Query: 20 YVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTY 79
Y++F + + ++F M RN++SW+A+I+GF +G AL + M+ ++ + T
Sbjct: 207 YMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTM 265
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
+ + ACA G R G ++H + L + + N L+NMY G L S+ +F+A
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV-GMQ 198
++ W S++SSY G H + +F+ R + + A +L C L + + G
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRG 385
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H+ K +E D ++ L+++Y K ++ A VF ++ D+ +W+ +I +AQ
Sbjct: 386 LHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMF 445
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
+A +LF+ M S + + T +L D + + GR +H IK G T + +
Sbjct: 446 RAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTS 505
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+ + Y C + F + D+VSWN+LI+ ++ + + G+A+ L M+ E PN
Sbjct: 506 LTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELE-PN 564
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKP--GFDSNVVIGSALVDMYAKCGRLNDARKV 436
T NIL + + + G+ H + + + + +A + MYA+CG+L A K+
Sbjct: 565 SVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKI 624
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
F L ++++VSWN M+ GY HG GR+A ++ M ++ KPN+ +F VLSAC H GL
Sbjct: 625 FCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLT 684
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
G F+SM+RD GI+P++ H +V L G A FI S PIEP+ +WR LLS
Sbjct: 685 VTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLS 744
Query: 557 GCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
C+ + L K++ +P + I+LSN+YA A +W E ++RK ++E+ L K
Sbjct: 745 SCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKP 804
Query: 617 TGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
G SW + N++H+F+ + Q ++E +N L+ + D G
Sbjct: 805 PGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 847
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 155/546 (28%), Positives = 271/546 (49%), Gaps = 8/546 (1%)
Query: 20 YVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTY 79
Y K + +A K+F EMPER+++SW+ALISG+ + A+ F M L PN T
Sbjct: 105 YCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTV 164
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
V + AC + R G+EIHG R+GL +++++V L+ Y + + S + VF L
Sbjct: 165 VALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHR-VFSLML 223
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
RN +SW ++++ + G+ LK++ G+ + V+ ACA G L++GMQ
Sbjct: 224 VRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQ 283
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H L K L D F+ L+N+Y+ L+ + +F+ + D W+++I Y G
Sbjct: 284 LHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGF 343
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE-TIGGRQLHSLIIKMGFSSFTFVAN 317
EAI LF+KM + T + +L D+ + +I GR LH+ +K G ++ N
Sbjct: 344 HAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGN 403
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
+L Y K + + F++M DV+SWN +I+ S +A EL M
Sbjct: 404 ALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKF 463
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
N YT ++L D + +G+ H +K G + N + ++L +MY CG A +F
Sbjct: 464 NSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMF 523
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
++LVSWN+++ Y ++ +AL +++ M ++++PN T I +L++C + +
Sbjct: 524 TRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI-SELEPNSVTIINILTSCTQLAHLP 582
Query: 498 EGWHYFNSMIRDHGISPRMDH--IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
G ++ +S MD + + ++A G+ + A E I + + V W ++
Sbjct: 583 LG-QCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYA-EKIFCTLQTRSIVSWNAMI 640
Query: 556 SGCKTH 561
+G H
Sbjct: 641 TGYGMH 646
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/517 (26%), Positives = 255/517 (49%), Gaps = 9/517 (1%)
Query: 44 WSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY 103
W+++I +++ L+ + M + P+ T + AC +G IH +
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHS--F 85
Query: 104 RSGLEL--NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHG 161
GL+L + V L++ Y KCGL++ A VF ER+ +SW +L+S Y C +
Sbjct: 86 IRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEA 145
Query: 162 LKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL-EFDKFVAMGLIN 220
+ +F+ +K+G+ + + ++L AC + L++G +IH + L + D +V L+
Sbjct: 146 VLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVG 205
Query: 221 LYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVT 280
Y + + + L+ RVFS + + ++ +W+A+I G+ +G +A+ L+ M G+ VT
Sbjct: 206 FYMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVT 264
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
V+ A A+ G QLH L IK + F+ N +L+ YS LE S F+ +
Sbjct: 265 MLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVP 324
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI-PAIEWGK 399
D WN++I+ ++ + EAI L M E ++ T + +L++ +D+ WG+
Sbjct: 325 TSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGR 384
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
H +K G + + +G+AL+ MY K ++ A+ VF+ + +++SWNTM+ +AQ
Sbjct: 385 GLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSM 444
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
+A E++ MM E++IK N T + +L+ C + G I++ G+
Sbjct: 445 FRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKN-GLEINTSLN 503
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
S+ ++ G R A P + + V W L+S
Sbjct: 504 TSLTEMYINCGDERAATNMFTRCP-QRDLVSWNSLIS 539
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 221/455 (48%), Gaps = 21/455 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG + N LL MYVK ++I AQ +F++M +VISW+ +IS F+Q A
Sbjct: 391 MKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAF 450
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F +M ++ N YT V ++ C D G+ IHG ++GLE+N+ ++ L MY
Sbjct: 451 ELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMY 510
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
CG +A +F +R+ +SW SL+SSY + L +F S + + +
Sbjct: 511 INCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLF-NHMISELEPNSVTII 569
Query: 182 SVLGACAVLGNLKVGMQIHSLVFK--CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++L +C L +L +G +H+ + +LE D +A I +YA+C KL A ++F +Q
Sbjct: 570 NILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQ 629
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+A+I GY G+ +A F +M G P+ V+F+ VL A + T+ G Q
Sbjct: 630 TRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQ 689
Query: 300 L-HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLAS 357
L HS++ G + ++D + E++ + M E D W AL L+S
Sbjct: 690 LFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRAL----LSS 745
Query: 358 CHYGEAIELLKDML-----FEGHCP-NLYTYSNIL---NISSDIPAI-EWGKQTHCCIVK 407
C +LL+ + E P N SNI + S++ I +W ++ + K
Sbjct: 746 CQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERG--LGK 803
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
P S +VIG+ + A + +++++L+S
Sbjct: 804 PPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNS 838
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 199/429 (46%), Gaps = 5/429 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
++ N LL MY + + LF+ +P + W+++IS + G A+ F M
Sbjct: 296 DLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMR 355
Query: 69 CCVLEPNYYTYVGAVSACASRGDARS-GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
++ + T +S C D G+ +H +SG+EL++++ N L++MY K +
Sbjct: 356 LERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQI 415
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
++AQ+VF+ + ISW +++S++ Q ++FL+ +S + + ++ S+L C
Sbjct: 416 TAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFC 475
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+L G IH K LE + + L +Y C A+ +F+ DL +W+
Sbjct: 476 KDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWN 535
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK- 306
+LI Y + A +A+ LF M S L P+ VT +L + + G+ LH+ +
Sbjct: 536 SLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRR 594
Query: 307 -MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
+ +AN + Y++C L+ + K F + +VSWNA+I G+ +A
Sbjct: 595 EVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATL 654
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALVDMY 424
ML +G PN +++++L+ S G Q H + G + +VD+
Sbjct: 655 AFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLL 714
Query: 425 AKCGRLNDA 433
+ G ++A
Sbjct: 715 GRGGHFSEA 723
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 172/352 (48%), Gaps = 6/352 (1%)
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS 201
S W S++ + + L + G+ + VL AC L + G++IHS
Sbjct: 25 SKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHS 84
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC- 260
+ L D V L++ Y KC + AS+VF + DL +W+ALI GY +G C
Sbjct: 85 FIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGY--VGCLCY 142
Query: 261 -EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG-FSSFTFVANT 318
EA+ LFV+M +GL P+ T +L A ++ E G+++H ++ G F +V
Sbjct: 143 KEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTA 202
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
++ FY + + + S + F M ++VSWNA+I G L +A++L ML EG +
Sbjct: 203 LVGFYMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFD 261
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T ++ ++ + G Q H +K +++ I +AL++MY+ G L + +F+
Sbjct: 262 AVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFN 321
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ + + WN+M+ Y G EA+ ++ M+ +IK + T +LS C
Sbjct: 322 AVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLC 373
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 185/570 (32%), Positives = 307/570 (53%), Gaps = 33/570 (5%)
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A VF+ E N + W ++ + + V LK+++ G+ + ++ +L +
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN--------- 237
CA L K G+QIH V K E D +V LI++Y + E+L+ A +VF
Sbjct: 73 CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132
Query: 238 ----------------------IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
I + D+ +W+A+I GY + G EA++LF +M + +
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P E T V+ A A GRQ+HS I GF S + N ++DFYSKC +E +
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F + DV+SWN LI G+ Y EA+ L ++ML G PN T +IL+ + + AI
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312
Query: 396 EWGKQTHCCIVK--PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+ G+ H I K G + + ++L+DMY+KCG + A +VF+ + K+L +WN M+
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIF 372
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
G+A HG A +I+S M++N+IKP+D TF+G+LSAC H G+++ G H F SM ++ I+
Sbjct: 373 GFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKIT 432
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEK 573
P+++H ++ L G + A E I + +EP+ V+W LL CK H ++ LG A+
Sbjct: 433 PKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQN 492
Query: 574 ILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
+ +P + ++++LSN+YA A W+E A++R ++ +K +KK GCS E+ + +H F
Sbjct: 493 LFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFII 552
Query: 634 SRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ +++ ++ ++ V L + G+VPD
Sbjct: 553 GDKFHPRNREIYGMLEEMEVLLQEAGFVPD 582
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 76/415 (18%)
Query: 226 EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
E L A VF IQ P+L W+ + G+A A+ L+V M S GL+P+ TF ++L
Sbjct: 11 EGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLL 70
Query: 286 GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
+ A +K + G Q+H ++K+G+ +V +++ Y + E LE++ K FD DVV
Sbjct: 71 KSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVV 130
Query: 346 SWNAL-------------------------------IAGHLASCHYGEAIELLKDMLFEG 374
S+ AL I+G++ + +Y EA+EL K+M+
Sbjct: 131 SYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTN 190
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P+ T +++ S+ +IE G+Q H I GF SN+ I +AL+D Y+KCG + A
Sbjct: 191 VRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETAC 250
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+F LS K+++SWN ++ GY L +EAL ++ M + PND T + +L AC H+G
Sbjct: 251 GLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLG 310
Query: 495 LVEEG-W------------------------------------HYFNSMIRDHGISPRMD 517
++ G W FNSM+ H P +
Sbjct: 311 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSML--HKSLPAWN 368
Query: 518 HIASVVHLFACRGQTRRAYEF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRY 569
+++ FA G+ A++ ++ + I+P+ + + LLS C L LGR+
Sbjct: 369 ---AMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRH 420
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 228/499 (45%), Gaps = 49/499 (9%)
Query: 23 FSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGA 82
F + A +F+ + E N++ W+ + G + P AL + M+ L PN YT+
Sbjct: 10 FEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFL 69
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER-- 140
+ +CA ++ G +IHG + + G EL+ +V LI+MY + L A VFD S R
Sbjct: 70 LKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDV 129
Query: 141 -----------------------------NSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
+ +SW +++S Y + G + L++F K+
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKT 189
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
V E + +V+ A A G++++G Q+HS + + + LI+ Y+KC +++ A
Sbjct: 190 NVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETA 249
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+F + D+ +W+ LIGGY L EA+ LF +M SG P++VT +L A A +
Sbjct: 250 CGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHL 309
Query: 292 KETIGGRQLHSLIIKM--GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
GR +H I K G ++ + + +++D YSKC +E + + F+ M + +WNA
Sbjct: 310 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNA 369
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCC 404
+I G A ++ M P+ T+ +L+ S ++ G+ TH
Sbjct: 370 MIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNY 429
Query: 405 IVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGRE 463
+ P + ++D+ G +A ++ ++ + V W ++L HG
Sbjct: 430 KITPKLEHY----GCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHG---- 481
Query: 464 ALEIYSMMQEN--KIKPND 480
+E+ +N KI+PN+
Sbjct: 482 NVELGEKFAQNLFKIEPNN 500
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 226/498 (45%), Gaps = 63/498 (12%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H +V++Y L+ Y I A+ +FDE+P ++V+SW+A+ISG+ + G + AL F+
Sbjct: 126 HRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKE 185
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ + P+ T V +SA A G G+++H + G N + N LI+ Y KCG
Sbjct: 186 MMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGE 245
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ +A +F ++ ISW L+ Y + L +F +SG + ++ + S+L A
Sbjct: 246 METACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHA 305
Query: 187 CAVLGNLKVGMQIHSLVFK--CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
CA LG + +G IH + K + + LI++Y+KC ++ A +VF+++ L
Sbjct: 306 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLP 365
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL---- 300
AW+A+I G+A G+A A D+F +M + + P ++TF +L A + GR +
Sbjct: 366 AWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSM 425
Query: 301 -HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASC 358
H+ I + ++D L +E+ + M E D V W +L L +C
Sbjct: 426 THNYKITPKLEHY----GCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSL----LKAC 477
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+E L E NL+ ++P + V+
Sbjct: 478 KMHGNVE-----LGEKFAQNLFK------------------------IEPNNPGSYVL-- 506
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVS------------WNTMLVGYAQHGLGREALE 466
L ++YA GR N+ ++ L+ K + + ++G H R E
Sbjct: 507 -LSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR---E 562
Query: 467 IYSMMQENKIKPNDNTFI 484
IY M++E ++ + F+
Sbjct: 563 IYGMLEEMEVLLQEAGFV 580
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 15/263 (5%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N+ N L+ Y K + A LF + ++VISW+ LI G++ + + + AL F
Sbjct: 225 GFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLF 284
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR--SGLELNSHVSNCLINMYG 122
+ M+ PN T + + ACA G G+ IH + + G+ S + LI+MY
Sbjct: 285 QEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYS 344
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG + +A VF++ L ++ +W +++ + G IF RK+ + + +
Sbjct: 345 KCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVG 404
Query: 183 VLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+L AC+ G L +G I + +K + + + M I+L A + S +
Sbjct: 405 LLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCM--IDLLGHSGLFKEAEEMISTMT 462
Query: 240 L-PDLTAWSALIGGYAQLGKACE 261
+ PD W +L+ KAC+
Sbjct: 463 MEPDGVIWCSLL-------KACK 478
>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
Length = 744
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 203/666 (30%), Positives = 342/666 (51%), Gaps = 20/666 (3%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY + + A++ FD M RNV+SWSA+I+ ++Q G P AL F M ++ N T
Sbjct: 1 MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV-SNCLINMYGKCGLLSSAQFVFDAS 137
+V + ACAS G GK IH R+ GL + + N ++NMYGKCG + A+ VF+
Sbjct: 61 FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK---SGVAISEFSCASVLGACAVLGNLK 194
+N+++W +++++ C H + F L + G+ ++ + SV+ ACA + ++
Sbjct: 121 EAKNTVTWNTMIAA---CSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIS 177
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G +H +V LE D VA L+NLY KC KL A I+ D +W+ L+ YA
Sbjct: 178 RGRIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYA 237
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
+ G AI + +M G+ TF +L + + G ++H + + G
Sbjct: 238 RHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPV 297
Query: 315 VANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ ++D Y KC + + + FD M D DV WNAL+A ++ E + + M +
Sbjct: 298 LQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQ 357
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG-FDSNVV-----IGSALVDMYAKC 427
G P+ T+ +IL+ + + A+ G+ TH +++ G FD V + +++++MYAKC
Sbjct: 358 GVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKC 417
Query: 428 GRLNDARKVF---DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
G L DA+ F + ++V+W+ M+ Y+Q GL EAL + MQ+ +KP+ +F+
Sbjct: 418 GSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFV 477
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
++ C H GLV E +F S+ DHGI+P H A +V L + G R A ++ +P+
Sbjct: 478 SAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPL 537
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+ W LLS C+T+ DL R A ++ S SA+ +L++V+ + WD+
Sbjct: 538 GAHHSTWMTLLSACRTYGDLERARRVAARLASL--RSGSAYSLLASVFCLSRKWDDVRNA 595
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMH-YFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
R+ + E+ GCSW E+ N+++ +F+ + ++ + +L V + GY D
Sbjct: 596 RQSLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAELERLCVEIRKAGYERD 655
Query: 664 PIYSSH 669
PI H
Sbjct: 656 PIKKVH 661
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 192/384 (50%), Gaps = 10/384 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+VI N ++ MY K ++ A+++F+ M +N ++W+ +I+ S+ + A M
Sbjct: 93 DVILGNTIVNMYGKCGEVDLAREVFERMEAKNTVTWNTMIAACSRHDRYKEAFALLGEMD 152
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
L PN T V + ACA G+ +H + GLE ++ V+N L+N+YGKCG L
Sbjct: 153 LDGLRPNKITLVSVIDACAWMQSISRGRIVHEIVAGEGLESDNAVANALVNLYGKCGKLR 212
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+A+ + R+ ISW +LL++Y + G + + GV + F+ ++L +C
Sbjct: 213 AARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCV 272
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-LPDLTAWS 247
+ L +G +IH + + +E D + L+++Y KC D A R F ++ + D+T W+
Sbjct: 273 AIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWN 332
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
AL+ Y + E + +F +M G+ P VTF +L A A + GR HS +++
Sbjct: 333 ALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLER 392
Query: 308 GF------SSFTFVANTVLDFYSKCELLEESLKTFDEMDE---HDVVSWNALIAGHLASC 358
G +S + +V++ Y+KC L ++ F + DVV+W+A++A +
Sbjct: 393 GLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFG 452
Query: 359 HYGEAIELLKDMLFEGHCPNLYTY 382
EA+ M EG P+ ++
Sbjct: 453 LSEEALRCFYSMQQEGVKPDSVSF 476
>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/618 (31%), Positives = 333/618 (53%), Gaps = 10/618 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+P+V ++ LL K +I A LF++ P + W+A+I+G ++ E+ALN FR
Sbjct: 116 NPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFRE 175
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + + YT+ +S C S G+E+H + ++G + + V N L+ MY G
Sbjct: 176 MHQLGVRHDKYTFASVLSLC-SLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGK 234
Query: 127 LSSAQFVFDA--SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
++ A VF+ S + I++ ++ G L +F +++ + +E + SV+
Sbjct: 235 VADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVM 294
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+C+ + +V Q+H+ K E V+ + +Y+ C L VF ++ DL
Sbjct: 295 SSCS---SARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLI 351
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ +I YAQ AI F++M +G+ P E T +L A ++ E + + +L+
Sbjct: 352 SWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLL-ASSESLEIV--KMFQALV 408
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
K G +S V+N ++ +SK +E++ + F+ M +++SWN +I+G L + + +
Sbjct: 409 SKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGL 468
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
E ++L PN YT S +L+I + I A+ GKQ H I++ G S +G+AL+ MY
Sbjct: 469 EQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMY 528
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN-KIKPNDNTF 483
AKCG L+ + ++F+ ++ +++VSWN M+ YAQHG G+EA+ + MQ++ +KP+ TF
Sbjct: 529 AKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATF 588
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
VLSAC H GLV++G FNSM+ D+G P DH++ +V L G A I S
Sbjct: 589 TAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKH 648
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
++ +W L S C H +L LGR A +L + D + +++LSN+YA A W+E A
Sbjct: 649 LKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAAN 708
Query: 604 VRKIMKEKSLKKDTGCSW 621
R +M++ + K GCSW
Sbjct: 709 TRDLMQKTRVAKQPGCSW 726
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 239/470 (50%), Gaps = 14/470 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPE 58
+I +GF N LL MY ++ DA ++F+E + I+++ +I G + +G E
Sbjct: 210 VIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDE 269
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
AL F+ M L P T+V +S+C+S AR ++H + + G E + VSN +
Sbjct: 270 EALIMFKEMQEACLRPTELTFVSVMSSCSS---ARVSHQVHAQAIKMGFEACTPVSNAAM 326
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY CG L + VFD E++ ISW ++ +Y Q + + FL +++G+ EF
Sbjct: 327 TMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEF 386
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S+L + L +K+ +LV K L V+ L++ ++K +++ A +VF+N+
Sbjct: 387 TIGSLLASSESLEIVKM---FQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNM 443
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
P+L +W+ +I G+ G + ++ F ++ S L P+ T S VL A + G+
Sbjct: 444 SSPNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGK 503
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H I++ G S T + N ++ Y+KC L+ SL+ F+ M+ D+VSWNA+I+ +
Sbjct: 504 QIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHG 563
Query: 359 HYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVI 416
EA+ K M G P+ T++ +L+ S ++ G + +V GF+
Sbjct: 564 KGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADH 623
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG---LGR 462
S +VD+ + G L +A ++ + K + S W T+ A HG LGR
Sbjct: 624 LSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGR 673
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 152/561 (27%), Positives = 262/561 (46%), Gaps = 75/561 (13%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L+P+++T ++ACA+ A SG ++H ++GL+ +HV N L++ Y K L S Q
Sbjct: 49 LKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQ 108
Query: 132 FVFDASLERNSISWVSLLSSYCQ----------------------------CGEHVH--- 160
VF+ + SW +LLS+ + C E+ H
Sbjct: 109 RVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEI 168
Query: 161 GLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLIN 220
L +F + GV +++ ASVL C+ L L G ++H+LV K V L+
Sbjct: 169 ALNLFREMHQLGVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTGFLVRASVINALLT 227
Query: 221 LYAKCEKLDLASRVFSNIQ--LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE 278
+Y K+ A VF + + D ++ +IGG A +G+ EA+ +F +M + L P+E
Sbjct: 228 MYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTE 287
Query: 279 VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE 338
+TF V+ + + + + Q+H+ IKMGF + T V+N + YS C L FD
Sbjct: 288 LTFVSVMSSCSSARVS---HQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDR 344
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
++E D++SWN +I + Y AI M G P+ +T ++L S + +
Sbjct: 345 LEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIV--- 401
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
K + K G +S + + +ALV ++K G++ A +VF+++SS NL+SWNT++ G+ +
Sbjct: 402 KMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFN 461
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR---------- 508
G + LE + + + +KPN T VLS C I + G ++R
Sbjct: 462 GFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLG 521
Query: 509 -----------DHGISPRMDHIA---------SVVHLFACRGQTRRAYEFIK----SSPI 544
D S R+ ++ +++ +A G+ + A F K S +
Sbjct: 522 NALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGV 581
Query: 545 EPNKVVWRCLLSGCKTHKDLV 565
+P++ + +LS C +H LV
Sbjct: 582 KPDQATFTAVLSAC-SHAGLV 601
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 136/263 (51%), Gaps = 35/263 (13%)
Query: 262 AIDLFVKMFSSG-LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
++ LFV++ SS L P T S L A A+++ G QLH+ I+ G ++T V NT+L
Sbjct: 36 SVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLL 95
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVS-------------------------------WNA 349
FY+K + L + F+E++ DV S WNA
Sbjct: 96 SFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNA 155
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I G + H A+ L ++M G + YT++++L++ S + +++G++ H ++K G
Sbjct: 156 IITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTG 214
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK--NLVSWNTMLVGYAQHGLGREALEI 467
F + +AL+ MY G++ DA +VF+ S + +++N M+ G A G EAL +
Sbjct: 215 FLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIM 274
Query: 468 YSMMQENKIKPNDNTFIGVLSAC 490
+ MQE ++P + TF+ V+S+C
Sbjct: 275 FKEMQEACLRPTELTFVSVMSSC 297
>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1005
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/671 (29%), Positives = 346/671 (51%), Gaps = 3/671 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEV 59
++ GF+ N L+ MY K ++ A++LFD E+ + + W++++S +S G
Sbjct: 188 LVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLE 247
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L FR M N YT V A++AC A+ GKEIH + +S +V N LI
Sbjct: 248 TLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIA 307
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY +CG + A + + ++W SL+ Y Q + L+ F +G E S
Sbjct: 308 MYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVS 367
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV+ A L NL GM++H+ V K + + V LI++Y+KC R F +
Sbjct: 368 LTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMH 427
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
DL +W+ +I GYA EA+ LF + + E+ +L A + +K + ++
Sbjct: 428 EKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKE 487
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H I++ G T + N ++D Y KC + + + F+ + DVVSW ++I+ + +
Sbjct: 488 IHCHILRKGLID-TVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGN 546
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA+EL + M G + IL+ ++ + A++ G++ H +++ GF I A
Sbjct: 547 ENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVA 606
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
+VDMYA CG L A+ VFD + K L+ + +M+ Y HG G+ ++E+++ M+ + P+
Sbjct: 607 VVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPD 666
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+F+ +L AC H GL++EG + M ++ + P +H +V + A+EF+
Sbjct: 667 HISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFV 726
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
K EP VW LL+ C++H + +G AA+++L +P++ +++SNV+AE W+
Sbjct: 727 KMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWN 786
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL-FDG 658
+ KVR MK ++K GCSW E+ K+H F+ + + +++E +++++ L +
Sbjct: 787 DVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPETKEIYEKLSEVTRKLERES 846
Query: 659 GYVPDPIYSSH 669
GY+ D + H
Sbjct: 847 GYLADTKFILH 857
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 283/534 (52%), Gaps = 6/534 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G + + Y +LL + K SR +K+FDEM +R +W+ALI + G P AL
Sbjct: 91 NGNNSPIEAYAYLLELCGK-SRALSQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFI 149
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+R M + + Y++ + AC D RSG E+H + + G + N L++MY K
Sbjct: 150 YRNMRVEGVPLDLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAK 209
Query: 124 CGLLSSAQFVFDASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
LS+A+ +FDAS E+ +++ W S+LSSY G+ + L++F + +G A + ++ S
Sbjct: 210 TDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVS 269
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
L AC K+G +IH+ V K F+ +V LI +YA+C K+ A R+ + D
Sbjct: 270 ALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNAD 329
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ W++LI GY Q EA+ F M ++G P EV+ + V+ A + + G +LH+
Sbjct: 330 VVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHA 389
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH-LASCHYG 361
+IK G+ S V NT++D YSKC L + F M E D++SW +IAG+ L CH
Sbjct: 390 YVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHV- 448
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA++L +D+ + + +IL S + ++ K+ HC I++ G + VI + LV
Sbjct: 449 EALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGL-IDTVIQNELV 507
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
D+Y KC + A +VF+ + K++VSW +M+ A +G EA+E++ M E + +
Sbjct: 508 DVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSV 567
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+ +LSA + +++G ++R G +VV ++AC G + A
Sbjct: 568 ALLCILSAAASLSALKKGREIHGYLLRK-GFCLEGSIAVAVVDMYACCGDLQSA 620
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 194/643 (30%), Positives = 334/643 (51%), Gaps = 5/643 (0%)
Query: 20 YVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTY 79
Y++F + + ++F M RN++SW+A+I+GF +G AL + M+ ++ + T
Sbjct: 207 YMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTM 265
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
+ + ACA G R G ++H + L + + N L+NMY G L S+ +F+A
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV-GMQ 198
++ W S++SSY G H + +F+ R + + A +L C L + + G
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRG 385
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H+ K +E D ++ L+++Y K ++ A VF ++ D+ +W+ +I +AQ
Sbjct: 386 LHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMF 445
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
+A +LF+ M S + + T +L D + + GR +H IK G T + +
Sbjct: 446 RAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTS 505
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+ + Y C + F + D+VSWN+LI+ ++ + + G+A+ L M+ E PN
Sbjct: 506 LTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELE-PN 564
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKP--GFDSNVVIGSALVDMYAKCGRLNDARKV 436
T NIL + + + G+ H + + + + +A + MYA+CG+L A K+
Sbjct: 565 SVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKI 624
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
F L ++++VSWN M+ GY HG GR+A ++ M ++ KPN+ +F VLSAC H GL
Sbjct: 625 FCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLT 684
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
G F+SM+RD GI+P++ H +V L G A FI S PIEP+ +WR LLS
Sbjct: 685 VTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLS 744
Query: 557 GCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
C+ + L K++ +P + I+LSN+YA A +W E ++RK ++E+ L K
Sbjct: 745 SCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKP 804
Query: 617 TGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
G SW + N++H+F+ + Q ++E +N L+ + D G
Sbjct: 805 PGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 847
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 155/546 (28%), Positives = 271/546 (49%), Gaps = 8/546 (1%)
Query: 20 YVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTY 79
Y K + +A K+F EMPER+++SW+ALISG+ + A+ F M L PN T
Sbjct: 105 YCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTV 164
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
V + AC + R G+EIHG R+GL +++++V L+ Y + + S + VF L
Sbjct: 165 VALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHR-VFSLML 223
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
RN +SW ++++ + G+ LK++ G+ + V+ ACA G L++GMQ
Sbjct: 224 VRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQ 283
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H L K L D F+ L+N+Y+ L+ + +F+ + D W+++I Y G
Sbjct: 284 LHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGF 343
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE-TIGGRQLHSLIIKMGFSSFTFVAN 317
EAI LF+KM + T + +L D+ + +I GR LH+ +K G ++ N
Sbjct: 344 HAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGN 403
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
+L Y K + + F++M DV+SWN +I+ S +A EL M
Sbjct: 404 ALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKF 463
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
N YT ++L D + +G+ H +K G + N + ++L +MY CG A +F
Sbjct: 464 NSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMF 523
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
++LVSWN+++ Y ++ +AL +++ M ++++PN T I +L++C + +
Sbjct: 524 TRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI-SELEPNSVTIINILTSCTQLAHLP 582
Query: 498 EGWHYFNSMIRDHGISPRMDH--IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
G ++ +S MD + + ++A G+ + A E I + + V W ++
Sbjct: 583 LG-QCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYA-EKIFCTLQTRSIVSWNAMI 640
Query: 556 SGCKTH 561
+G H
Sbjct: 641 TGYGMH 646
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 252/515 (48%), Gaps = 5/515 (0%)
Query: 44 WSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY 103
W+++I +++ L+ + M + P+ T + AC +G IH +
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87
Query: 104 RSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLK 163
L + V L++ Y KCGL++ A VF ER+ +SW +L+S Y C + +
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 164 IFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL-EFDKFVAMGLINLY 222
+F+ +K+G+ + + ++L AC + L++G +IH + L + D +V L+ Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
+ + + L+ RVFS + + ++ +W+A+I G+ +G +A+ L+ M G+ VT
Sbjct: 208 MRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTML 266
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
V+ A A+ G QLH L IK + F+ N +L+ YS LE S F+ +
Sbjct: 267 VVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTS 326
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI-PAIEWGKQT 401
D WN++I+ ++ + EAI L M E ++ T + +L++ +D+ WG+
Sbjct: 327 DAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGL 386
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H +K G + + +G+AL+ MY K ++ A+ VF+ + +++SWNTM+ +AQ
Sbjct: 387 HAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFR 446
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
+A E++ MM E++IK N T + +L+ C + G I++ G+ S
Sbjct: 447 AKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKN-GLEINTSLNTS 505
Query: 522 VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+ ++ G R A P + + V W L+S
Sbjct: 506 LTEMYINCGDERAATNMFTRCP-QRDLVSWNSLIS 539
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 221/455 (48%), Gaps = 21/455 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG + N LL MYVK ++I AQ +F++M +VISW+ +IS F+Q A
Sbjct: 391 MKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAF 450
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F +M ++ N YT V ++ C D G+ IHG ++GLE+N+ ++ L MY
Sbjct: 451 ELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMY 510
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
CG +A +F +R+ +SW SL+SSY + L +F S + + +
Sbjct: 511 INCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLF-NHMISELEPNSVTII 569
Query: 182 SVLGACAVLGNLKVGMQIHSLVFK--CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++L +C L +L +G +H+ + +LE D +A I +YA+C KL A ++F +Q
Sbjct: 570 NILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQ 629
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+A+I GY G+ +A F +M G P+ V+F+ VL A + T+ G Q
Sbjct: 630 TRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQ 689
Query: 300 L-HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLAS 357
L HS++ G + ++D + E++ + M E D W AL L+S
Sbjct: 690 LFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRAL----LSS 745
Query: 358 CHYGEAIELLKDML-----FEGHCP-NLYTYSNIL---NISSDIPAI-EWGKQTHCCIVK 407
C +LL+ + E P N SNI + S++ I +W ++ + K
Sbjct: 746 CQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERG--LGK 803
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
P S +VIG+ + A + +++++L+S
Sbjct: 804 PPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNS 838
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 199/429 (46%), Gaps = 5/429 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
++ N LL MY + + LF+ +P + W+++IS + G A+ F M
Sbjct: 296 DLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMR 355
Query: 69 CCVLEPNYYTYVGAVSACASRGDARS-GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
++ + T +S C D G+ +H +SG+EL++++ N L++MY K +
Sbjct: 356 LERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQI 415
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
++AQ+VF+ + ISW +++S++ Q ++FL+ +S + + ++ S+L C
Sbjct: 416 TAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFC 475
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+L G IH K LE + + L +Y C A+ +F+ DL +W+
Sbjct: 476 KDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWN 535
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK- 306
+LI Y + A +A+ LF M S L P+ VT +L + + G+ LH+ +
Sbjct: 536 SLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRR 594
Query: 307 -MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
+ +AN + Y++C L+ + K F + +VSWNA+I G+ +A
Sbjct: 595 EVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATL 654
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALVDMY 424
ML +G PN +++++L+ S G Q H + G + +VD+
Sbjct: 655 AFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLL 714
Query: 425 AKCGRLNDA 433
+ G ++A
Sbjct: 715 GRGGHFSEA 723
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 172/352 (48%), Gaps = 6/352 (1%)
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS 201
S W S++ + + L + G+ + VL AC L + G++IHS
Sbjct: 25 SKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHS 84
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC- 260
+ L D V L++ Y KC + AS+VF + DL +W+ALI GY +G C
Sbjct: 85 CIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGY--VGCLCY 142
Query: 261 -EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG-FSSFTFVANT 318
EA+ LFV+M +GL P+ T +L A ++ E G+++H ++ G F +V
Sbjct: 143 KEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTA 202
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
++ FY + + + S + F M ++VSWNA+I G L +A++L ML EG +
Sbjct: 203 LVGFYMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFD 261
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T ++ ++ + G Q H +K +++ I +AL++MY+ G L + +F+
Sbjct: 262 AVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFN 321
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ + + WN+M+ Y G EA+ ++ M+ +IK + T +LS C
Sbjct: 322 AVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLC 373
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 201/632 (31%), Positives = 322/632 (50%), Gaps = 85/632 (13%)
Query: 82 AVSACASRGDA-------------RSGKEIHGRMYRSGLEL------NSHVSNCLINMYG 122
A+ A SRG A RS + + ++ ++L ++ + N L+++Y
Sbjct: 10 AIDALYSRGTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYA 69
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE-----------HVH----------- 160
K G LS A+ +FD R+ SW ++LS+Y + G VH
Sbjct: 70 KSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAG 129
Query: 161 ---------GLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
L+ F+ ++ G ++++ SVL AC+ L ++K G QIH + +L
Sbjct: 130 FSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGES 189
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
FV L N+YAKC LD A +F + ++ +W+++I GY Q G+ LF +M S
Sbjct: 190 VFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQS 249
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
SGLMP +VT S +L A Y +C ++E
Sbjct: 250 SGLMPDQVTISNILSA-----------------------------------YFQCGYIDE 274
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+ KTF E+ E D V W ++ G + +A+ L ++ML E P+ +T S++++ +
Sbjct: 275 ACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCAR 334
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ ++ G+ H V G D ++++ SALVDMY+KCG DA VF + ++N++SWN+M
Sbjct: 335 LASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSM 394
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
++GYAQ+G EAL +Y M +KP++ TF+GVLSAC+H GLVE G YF S+ + HG
Sbjct: 395 ILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHG 454
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA 571
++P DH + +++L G +A + IKS EPN ++W LLS C+ + D+ G AA
Sbjct: 455 MNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAA 514
Query: 572 EKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+ DP + +IMLSN+YA W + A VR +MK +KK SW E+ N++H F
Sbjct: 515 RHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKF 574
Query: 632 STSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ ++E +N+L L + G+ PD
Sbjct: 575 VAEDRTHSETEQIYEELNRLIKKLQESGFTPD 606
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 213/450 (47%), Gaps = 45/450 (10%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V ++N +L Y K + D + +FD+M + +S++ +I+GFS G AL +F M
Sbjct: 88 DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
E YT+V + AC+ D + GK+IHGR+ + L + V N L NMY KCG L
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+++FD + +N +SW S++S Y Q G+ K+F + SG+ + + +++L A
Sbjct: 208 QARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA-- 265
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
Y +C +D A + F I+ D W+
Sbjct: 266 ---------------------------------YFQCGYIDEACKTFREIKEKDKVCWTT 292
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
++ G AQ GK +A+ LF +M + P T S V+ + A + G+ +H + G
Sbjct: 293 MMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFG 352
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
V++ ++D YSKC ++ F M +V+SWN++I G+ + EA+ L +
Sbjct: 353 VDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYE 412
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-----PGFDSNVVIGSALVDM 423
+ML E P+ T+ +L+ +E G+ I K P FD S ++++
Sbjct: 413 EMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHY----SCMINL 468
Query: 424 YAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
+ G ++ A + ++ N + W+T+L
Sbjct: 469 LGRAGYMDKAVDLIKSMTFEPNCLIWSTLL 498
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 187/442 (42%), Gaps = 81/442 (18%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ + +V +N L MY K ++ A+ LFD M +NV+SW+++ISG+ Q G PE
Sbjct: 181 IVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETC 240
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M L P+ T +SA
Sbjct: 241 TKLFCEMQSSGLMPDQVTISNILSA----------------------------------- 265
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG + A F E++ + W +++ Q G+ L +F V F+
Sbjct: 266 YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTI 325
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+SV+ +CA L +L G +H ++ D V+ L+++Y+KC + A VF +
Sbjct: 326 SSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLT 385
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+++I GYAQ GK EA+ L+ +M L P +TF VL A +
Sbjct: 386 RNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSAC-----------M 434
Query: 301 HSLIIKMGFSSFTFVA-----NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL-IAGH 354
H+ +++ G F ++ N D YS C + N L AG+
Sbjct: 435 HAGLVERGQGYFYSISKIHGMNPTFDHYS-CMI-------------------NLLGRAGY 474
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ +A++L+K M FE +C T ++ I+ D+ E + H + P
Sbjct: 475 M-----DKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAAR-HLFELDPHNAGPY 528
Query: 415 VIGSALVDMYAKCGRLNDARKV 436
++ L ++YA CGR D V
Sbjct: 529 IM---LSNIYAACGRWKDVAAV 547
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 194/666 (29%), Positives = 339/666 (50%), Gaps = 11/666 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G + L ++Y +++ + A KLF+E P + V W+AL+ + G L+ F
Sbjct: 31 GLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLF 90
Query: 65 RLMVCCVL---EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
M + P+ YT A+ +C+ GK IHG + + ++ + V + LI +Y
Sbjct: 91 HQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELY 150
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF----LLSRKSGVAISE 177
KCG ++ A VF +++ + W S+++ Y Q G L F +L + S ++
Sbjct: 151 SKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTL 210
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
S AS ACA L + +G +H V + + +A ++NLY K + A+ +F
Sbjct: 211 VSAAS---ACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFRE 267
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ D+ +WS+++ YA G A++LF +M + + VT L A A G
Sbjct: 268 MPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEG 327
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+ +H L + GF V+ ++D Y KC + ++ F+ M + DVVSW L +G+
Sbjct: 328 KHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEI 387
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+++ + +ML G P+ IL SS++ ++ H + K GFD+N IG
Sbjct: 388 GMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIG 447
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI-YSMMQENKI 476
++L+++YAKC +++A KVF + K++V+W++++ Y HG G EAL++ Y M + +
Sbjct: 448 ASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDV 507
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KPND TF+ +LSAC H GL+EEG F+ M+ ++ + P +H +V L G+ +A
Sbjct: 508 KPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKAL 567
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+ I P++ VW LL C+ H+++ +G AA + DP + +LSN+Y
Sbjct: 568 DMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCVDK 627
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W + AK+R ++KE KK G S E++N++H F S + ++ ++ +L +
Sbjct: 628 NWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYGMLRKLDARMK 687
Query: 657 DGGYVP 662
+ GY P
Sbjct: 688 EEGYDP 693
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 174/364 (47%), Gaps = 6/364 (1%)
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+HS K L D FV L LYA+ L A ++F + W+AL+ Y G
Sbjct: 22 QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81
Query: 258 KACEAIDLFVKMFSSGLM---PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
K E + LF +M + + P T S L + + +++ G+ +H + K + F
Sbjct: 82 KWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMF 141
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM-LFE 373
V + +++ YSKC + +++K F E + DVV W ++I G+ + A+ M + E
Sbjct: 142 VGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLE 201
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
P+ T + + + + G+ H + + GFD+ + + ++++++Y K G + A
Sbjct: 202 QVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSA 261
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+F + K+++SW++M+ YA +G AL +++ M + +I+ N T I L AC
Sbjct: 262 ANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASS 321
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
+EEG H + + ++G + +++ ++ + A + P + + V W
Sbjct: 322 SNLEEGKH-IHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMP-KKDVVSWAV 379
Query: 554 LLSG 557
L SG
Sbjct: 380 LFSG 383
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 130/254 (51%), Gaps = 3/254 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF ++ L+ MY+K +A LF+ MP+++V+SW+ L SG+++IGM +L
Sbjct: 335 VNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSL 394
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M+ P+ V ++A + G + +H + +SG + N + LI +Y
Sbjct: 395 GVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELY 454
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSC 180
KC + +A VF ++ ++W S++++Y G+ LK+F +S S V ++ +
Sbjct: 455 AKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTF 514
Query: 181 ASVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+L AC+ G ++ G+++ H +V + L + +++L + +LD A + + +
Sbjct: 515 VSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMP 574
Query: 240 L-PDLTAWSALIGG 252
+ W AL+G
Sbjct: 575 MQAGPHVWGALLGA 588
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/482 (34%), Positives = 270/482 (56%), Gaps = 1/482 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S++ ACA NL IH+ + + L D F+ LI++Y KC + A VF +
Sbjct: 65 SIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSR 124
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W+ LI GYAQ EAI L M + P+ TF+ +L A G Q+H
Sbjct: 125 DVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMH 184
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+L +K + +V + +LD Y++CE ++ ++ FD + + VSWNALIAG
Sbjct: 185 ALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGE 244
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+ +M G +TYS++ + + I A+E G+ H ++K G +G+ ++
Sbjct: 245 TTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTML 304
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
MYAK G + DARKVFD + ++LV+WNTML AQ+GLG+EA+ + +++ I+ N
Sbjct: 305 GMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQI 364
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL+AC H GLV+EG HYF+ M++D+ + P +DH S V L G + A F+
Sbjct: 365 TFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFK 423
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P+EP VW LL C+ HK+ +G+YAA+ + DP+DT ++L N+YA W++
Sbjct: 424 MPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDA 483
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A+VRK+MK +KK+ CSW +++N +H F + D++ + ++++ + GYV
Sbjct: 484 ARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYV 543
Query: 662 PD 663
P+
Sbjct: 544 PN 545
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 183/369 (49%), Gaps = 14/369 (3%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L P Y ++ACA + + IH + RS L ++ + N LI+MY KCG +S A+
Sbjct: 56 LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD R+ +SW L++ Y Q + + ++ + F+ S+L A G
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 175
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+G Q+H+L K + D +V L+++YA+CE++D+A VF + + +W+ALI
Sbjct: 176 GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 235
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G+A+ + F +M +G + T+S + AFA + GR +H+ +IK G
Sbjct: 236 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKL 295
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---EAIELLK 368
FV NT+L Y+K + ++ K FD MD+ D+V+WN ++ A YG EA+ +
Sbjct: 296 TAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLT---ALAQYGLGKEAVAHFE 352
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI----VKPGFDSNVVIGSALVDMY 424
++ G N T+ ++L S ++ GK + V+P D V + VD+
Sbjct: 353 EIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYV----SFVDLL 408
Query: 425 AKCGRLNDA 433
+ G L +A
Sbjct: 409 GRAGLLKEA 417
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 172/352 (48%), Gaps = 23/352 (6%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ MY K ++DA+ +FD+MP R+V+SW+ LI+G++Q MP A+ M+
Sbjct: 99 NSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFR 158
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN +T+ + A + G G+++H + + + +V + L++MY +C + A V
Sbjct: 159 PNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMV 218
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD + +N +SW +L++ + + + L F +++G + F+ +S+ A A +G L
Sbjct: 219 FDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGAL 278
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+ G +H+ + K + FV ++ +YAK + A +VF + DL W+ ++
Sbjct: 279 EQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTAL 338
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
AQ G EA+ F ++ G+ +++TF VL A + H ++K G F
Sbjct: 339 AQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACS-----------HGGLVKEGKHYFD 387
Query: 314 FVAN-----------TVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
+ + + +D + LL+E+L +M E W AL+
Sbjct: 388 MMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 439
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 123/226 (54%)
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
L P+ + ++ A A K G R +H+ + + + F+ N+++ Y KC + ++
Sbjct: 56 LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
FD+M DVVSW LIAG+ + EAI LL DML PN +T++++L +
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 175
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
G+Q H VK +D +V +GSAL+DMYA+C +++ A VFD L SKN VSWN ++
Sbjct: 176 GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 235
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
G+A+ G L ++ MQ N T+ + SA IG +E+G
Sbjct: 236 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQG 281
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 41/237 (17%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG N +L MY K + DA+K+FD M +R++++W+ +++ +Q G+ + A
Sbjct: 288 LIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEA 347
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM--YRSGLELNSHVSNCLI 118
+ +F + C ++ N T++ ++AC+ G + GK M Y E++ +VS +
Sbjct: 348 VAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVS--FV 405
Query: 119 NMYGKCGLLSSAQ-FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
++ G+ GLL A FVF +E + W +L
Sbjct: 406 DLLGRAGLLKEALIFVFKMPMEPTAAVWGAL----------------------------- 436
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
LGAC + N K+G VF+ + D + L N+YA K + A+RV
Sbjct: 437 ------LGACRMHKNAKMGQYAADHVFELDPD-DTGPPVLLYNIYASTGKWNDAARV 486
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/617 (29%), Positives = 327/617 (52%), Gaps = 3/617 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ Y ++ A+ + +PER+ +SW+AL++G+++ G + +V E +
Sbjct: 192 LVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEIS 251
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
YT + C G A+ G+ +H + + GLE ++ +++CL+ MY +C A VF
Sbjct: 252 KYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFI 311
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
E + + +++S + + L +F+ GV + + + G + G+ +
Sbjct: 312 RIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANL 371
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
+H+ + K K V ++N+Y K + A+ F I PD +W+ ++ +
Sbjct: 372 CRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYS 431
Query: 256 LGKACE-AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
G CE + +F +M G ++ T+ VL + G Q+H+ I+K G + T
Sbjct: 432 -GSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTD 490
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V+ ++D Y++ + F+++ E D SW +++G+ + + +E + ML E
Sbjct: 491 VSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLREN 550
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P+ T + L++ SD+ ++ G Q H +K G++S+VV G ALVDMY KCG + DA
Sbjct: 551 IRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSVVSG-ALVDMYVKCGNIADAE 609
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+F +++ V+WNT++ GY+QHG G +AL+ + M + +P+ TF+GVLSAC H G
Sbjct: 610 MLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAG 669
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
L+ EG YF S+ +GI+P M+H A +V + + G+ A I P+ P+ +WR +
Sbjct: 670 LLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTI 729
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
L C+ H+++ + AAE++ +P D S+ I+LSN+YA+ W + +VR I+ + +K
Sbjct: 730 LGACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVK 789
Query: 615 KDTGCSWTELQNKMHYF 631
K+ GCSW E+ ++H F
Sbjct: 790 KEPGCSWIEINGQIHMF 806
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/562 (29%), Positives = 284/562 (50%), Gaps = 5/562 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S HP+ + LL MY K R+ DA+++FD MP R++++W+A+IS + G + A
Sbjct: 76 LLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQA 135
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLIN 119
L+ F M + PN +T + AC+ ++ ++HG++ + +GL+ + +V + L+
Sbjct: 136 LDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLD-DPYVGSSLVE 194
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y CG L +A+ V ER+ +SW +LL+ Y + G++ + I SG IS+++
Sbjct: 195 AYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYT 254
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+VL C LG K G +H+ V K LE D + L+ +Y++C + A VF I
Sbjct: 255 LPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRID 314
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PD+ SA+I + + A EA+DLFVKM G+ P+ F + G + + R
Sbjct: 315 EPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRS 374
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ I+K GF+ V + +L+ Y K ++++ TFD + E D SWN +++ + +
Sbjct: 375 VHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSN 434
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+ + + K M EG N YTY ++L + + + +G Q H CI+K G ++ +
Sbjct: 435 CEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRM 494
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMYA+ G A VF+ L ++ SW ++ GYA+ + +E + M I+P+
Sbjct: 495 LVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPS 554
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
D T LS C + + G + I+ S + ++V ++ G A
Sbjct: 555 DATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSVVS--GALVDMYVKCGNIADAEMLF 612
Query: 540 KSSPIEPNKVVWRCLLSGCKTH 561
S ++V W ++ G H
Sbjct: 613 HESETR-DQVAWNTIICGYSQH 633
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 230/482 (47%), Gaps = 8/482 (1%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
+ A+ CA R R G+E+H R+ RS L ++ + + L+NMY KCG L A+ VFD
Sbjct: 53 HAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMP 112
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
R+ ++W +++S++ G+ L +F + G+A + F+ ASVL AC+ + K Q
Sbjct: 113 HRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQ 172
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H V K D +V L+ Y C +LD A V + +W+AL+ GYA+ G
Sbjct: 173 VHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGD 232
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
+ + K+ +SG S+ T VL ++ G+ +H+ +IK G + + +
Sbjct: 233 YRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSC 292
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+++ YS+C EE+ + F +DE DVV +A+I+ EA++L M G PN
Sbjct: 293 LVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPN 352
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
Y + I ++S + H IVK GF +G A+++MY K G + DA FD
Sbjct: 353 HYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFD 412
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+ + SWNT+L + + L I+ M N T++ VL C + +
Sbjct: 413 LIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRF 472
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA---YEFIKSSPIEPNKVVWRCLL 555
G +++ G+ D +V ++A G A +E +K E + W ++
Sbjct: 473 GTQVHACILKS-GLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLK----ERDAFSWTVIM 527
Query: 556 SG 557
SG
Sbjct: 528 SG 529
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/656 (27%), Positives = 337/656 (51%), Gaps = 66/656 (10%)
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINMYGKCGLLSSAQ 131
P Y +SA A+R + + +H + R+ +H+ N L+ YGK G + A+
Sbjct: 3 RPLSSQYAALLSA-AARTEPHAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARAR 61
Query: 132 FVFDAS-------------------------------LERNSISWVSLLSSYCQCGEHVH 160
VFDA+ +R+++S+ ++++ + G H
Sbjct: 62 RVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHAR 121
Query: 161 GLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
++++ LL S V S + ++++ A + LG+ +G Q H + + + FV L
Sbjct: 122 AVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPL 181
Query: 219 INLYAK-------------------------------CEKLDLASRVFSNIQLPDLTAWS 247
+ +YAK C+ ++ A R+F + D W+
Sbjct: 182 VGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWT 241
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
++ G+ Q G +A++ F +M G+ + TF +L A + G+Q+H+ II+
Sbjct: 242 TMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT 301
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
+ FV + ++D YSKC ++ + F M +++SW ALI G+ + EA+ +
Sbjct: 302 HYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVF 361
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+M +G P+ +T ++++ +++ ++E G Q HC + G + + +ALV +Y KC
Sbjct: 362 SEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKC 421
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G + DA ++FD + + VSW ++ GYAQ G +E ++++ M +KP+ TFIGVL
Sbjct: 422 GSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVL 481
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC G VE+G YF+SM +DHGI P DH ++ L++ G+ + A EFIK P+ P+
Sbjct: 482 SACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPD 541
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
+ W LLS C+ D+ +G++AAE +L DP++ +++++L +++A W++ A++R+
Sbjct: 542 AIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRG 601
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
M+++ +KK+ GCSW + +NK+H FS + ++E + L+ + + GY PD
Sbjct: 602 MRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPD 657
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 234/484 (48%), Gaps = 41/484 (8%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR- 65
HPN+ TYN LL ++D LF M +R+ +S++A+I+GFS G A+ +
Sbjct: 69 HPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHT 128
Query: 66 -LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
L + P+ T V A ++ GD G++ H ++ R G +N+ V + L+ MY K
Sbjct: 129 LLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKM 188
Query: 125 GLLSSAQFVFD-------------------------------ASLERNSISWVSLLSSYC 153
GL+ A+ VFD +R+ I+W ++++ +
Sbjct: 189 GLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFT 248
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
Q G L F R G+AI +++ S+L AC L L+ G QIH+ + + + + F
Sbjct: 249 QNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVF 308
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
V L+++Y+KC + A F + ++ +W+ALI GY Q G + EA+ +F +M G
Sbjct: 309 VGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ P + T V+ + A++ G Q H L + G + V+N ++ Y KC +E++
Sbjct: 369 IDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAH 428
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
+ FDEM HD VSW AL+ G+ E I+L + ML + P+ T+ +L+ S
Sbjct: 429 RLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAG 488
Query: 394 AIEWGKQTHCCIVKPGFDSNVVI----GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSW 448
+E G + K D +V + ++D+Y++ GRL +A + + + + W
Sbjct: 489 FVEKGCSYFHSMQK---DHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGW 545
Query: 449 NTML 452
T+L
Sbjct: 546 GTLL 549
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 182/347 (52%), Gaps = 2/347 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
NV+ YN ++ ++ + +A++LF+ M +R+ I+W+ +++GF+Q G+ ALN+FR M
Sbjct: 205 NVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMR 264
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ + YT+ ++AC + GK+IH + R+ + N V + L++MY KC +
Sbjct: 265 FQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIK 324
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ F +N ISW +L+ Y Q G +++F ++ G+ +F+ SV+ +CA
Sbjct: 325 PAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCA 384
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L +L+ G Q H L L V+ L+ LY KC ++ A R+F + D +W+A
Sbjct: 385 NLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTA 444
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG-RQLHSLIIKM 307
L+ GYAQ G+A E IDLF KM + + P VTF VL A + G HS+
Sbjct: 445 LVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDH 504
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAG 353
G ++D YS+ L+E+ + +M H D + W L++
Sbjct: 505 GIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 119/254 (46%), Gaps = 6/254 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + + NV + L+ MY K I A+ F M +N+ISW+ALI G+ Q G E A
Sbjct: 298 IIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEA 357
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M ++P+ +T +S+CA+ G + H SGL VSN L+ +
Sbjct: 358 VRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTL 417
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG + A +FD L + +SW +L++ Y Q G + +F V +
Sbjct: 418 YGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTF 477
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCALEF--DKFVAMGLINLYAKCEKLDLASRVFSN 237
VL AC+ G ++ G HS+ + D + M I+LY++ +L A
Sbjct: 478 IGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCM--IDLYSRSGRLKEAEEFIKQ 535
Query: 238 IQL-PDLTAWSALI 250
+ + PD W L+
Sbjct: 536 MPMHPDAIGWGTLL 549
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 325/622 (52%), Gaps = 4/622 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G ++ L+ +Y F DA+ +FD++PE + W ++ + + +
Sbjct: 82 NGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNNESFEVIKF 141
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+ L++ + + A+ AC D +GK+IH ++ + ++ V L++MY K
Sbjct: 142 YDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVP-SFDNVVLTGLLDMYAK 200
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + S+ VF+ RN + W S+++ Y + + GL +F R++ V +E++ ++
Sbjct: 201 CGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTL 260
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
+ AC L L G H + K +E + L+++Y KC + A RVF+ DL
Sbjct: 261 VMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDL 320
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W+A+I GY G EA+ LF KM G+ P+ VT + VL V GR +H L
Sbjct: 321 VMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGL 380
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
IK+G T VAN ++ Y+KC ++ F+ E D+V+WN++I+G + EA
Sbjct: 381 SIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEA 439
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF--DSNVVIGSALV 421
+ L M E PN T +++ + + + ++ G H VK GF S+V +G+AL+
Sbjct: 440 LFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALL 499
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
D YAKCG AR +FD + KN ++W+ M+ GY + G + +LE++ M + + KPN++
Sbjct: 500 DFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNES 559
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF VLSAC H G+V EG YF+SM +D+ +P H +V + A G+ +A + I+
Sbjct: 560 TFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEK 619
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
PI+P+ + L GC H LG +K+L P+D S ++++SN+YA W +
Sbjct: 620 MPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQA 679
Query: 602 AKVRKIMKEKSLKKDTGCSWTE 623
+VR +MK++ L K G S E
Sbjct: 680 KEVRNLMKQRGLSKIAGHSIME 701
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 233/469 (49%), Gaps = 4/469 (0%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
++ HG + +GL + ++ L+++YG G A+ VFD E + W +L YC
Sbjct: 73 RQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLN 132
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
E +K + L K G + + L AC + +L G +IH + K FD V
Sbjct: 133 NESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVP-SFDNVVL 191
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
GL+++YAKC ++ + +VF +I L ++ W+++I GY + E + LF +M + ++
Sbjct: 192 TGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVL 251
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
+E T+ ++ A ++ G+ H +IK G + + ++LD Y KC + + +
Sbjct: 252 GNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRV 311
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F+E D+V W A+I G+ + EA+ L + M G PN T +++L+ + +
Sbjct: 312 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNL 371
Query: 396 EWGKQTHCCIVKPG-FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
E G+ H +K G +D+NV +ALV MYAKC + DA+ VF+ S K++V+WN+++ G
Sbjct: 372 ELGRSIHGLSIKVGIWDTNV--ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISG 429
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
++Q+G EAL ++ M + PN T + SAC +G + G ++ ++
Sbjct: 430 FSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLAS 489
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
H+ + + F + + I + E N + W ++ G D
Sbjct: 490 SSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGD 538
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 184/357 (51%), Gaps = 5/357 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + LL MYVK I++A+++F+E +++ W+A+I G++ G A
Sbjct: 280 LIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 339
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F+ M ++PN T +S C G+ G+ IHG + G+ +++V+N L++M
Sbjct: 340 LSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHM 398
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC A++VF+ E++ ++W S++S + Q G L +F V + +
Sbjct: 399 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTV 458
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLASRVFSNI 238
AS+ ACA LG+L +G +H+ K V +G L++ YAKC + A +F I
Sbjct: 459 ASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTI 518
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ + WSA+IGGY + G +++LF +M P+E TF+ VL A + G+
Sbjct: 519 EEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGK 578
Query: 299 QLHSLIIK-MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
+ S + K F+ T ++D ++ LE++L ++M + DV + A + G
Sbjct: 579 KYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 635
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/606 (32%), Positives = 322/606 (53%), Gaps = 6/606 (0%)
Query: 2 ITSGF--HPNVITY-NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPE 58
ITSG PN I +HL + Y + A+KLFD++ + ++ W+A+I + G
Sbjct: 106 ITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHF 165
Query: 59 VALNYFRLMVCC-VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
AL F M+C P+ YT+ + AC+ G IHGR SG N V N L
Sbjct: 166 DALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSL 225
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+ MY CG + A+ VF+ L+R+ +SW +++S + Q G L +F + V
Sbjct: 226 LAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDS 285
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ S L +C L L++G+++H LV K L+ V L+++Y++C +D AS VF+
Sbjct: 286 ATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAE 345
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ D+ W+++I GY G A A+ L M G++P+ VT + +L A A + G
Sbjct: 346 TKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQG 405
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+ LH+ +++ S V ++D Y+KC + S + F + V WNAL++G + +
Sbjct: 406 KSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHN 465
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA+ L K ML E N T+++++ + + ++ H +V+ GF S + +
Sbjct: 466 ELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVI 525
Query: 418 SALVDMYAKCGRLNDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ L+DMY+KCG L+ A K+FD + + K+++ W+ ++ GY HG G A+ +++ M +
Sbjct: 526 TGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSG 585
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
++PN+ TF VL AC H GLV++G F MI ++ SP +H VV L G+ A
Sbjct: 586 MQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEA 645
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
Y+ IKS P + N +W LL C H+++ LG AAE++ +PE T +I+L+N+YA
Sbjct: 646 YDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAV 705
Query: 596 NMWDET 601
W +
Sbjct: 706 GRWKDA 711
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPE 58
++ SGF + L+ MY K ++ A K+FDE+P E+++I WS LI+G+ G E
Sbjct: 513 LVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGE 572
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS--GLELNSHVSNC 116
A+ F MV ++PN T+ + AC+ RG G + M + L +H + C
Sbjct: 573 TAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYT-C 631
Query: 117 LINMYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
++++ G+ G L A + ++N W +LL +
Sbjct: 632 VVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGA 667
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/653 (29%), Positives = 332/653 (50%), Gaps = 72/653 (11%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ Y + + +++FD M ++NV W+ ++S +++IG + ++ F++MV
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMV------- 192
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
K I G+ S EL FD
Sbjct: 193 -------------------EKGIEGKRPESASEL------------------------FD 209
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+R+ ISW S++S Y G GL I+ G+ + + SVL CA G L +
Sbjct: 210 KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSL 269
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +HSL K + E + L+++Y+KC LD A RVF + ++ +W+++I GY +
Sbjct: 270 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G + AI L +M G+ V + +L A A G+ +H I +S FV
Sbjct: 330 DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFV 389
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
N ++D Y+KC +E + F M D++SWN ++ G L
Sbjct: 390 CNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV-GELK------------------- 429
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+ T + IL + + A+E GK+ H I++ G+ S+ + +ALVD+Y KCG L AR
Sbjct: 430 -PDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+FD + SK+LVSW M+ GY HG G EA+ ++ M++ I+P++ +FI +L AC H GL
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+E+GW +F M D I P+++H A +V L + G +AY+FI++ PI P+ +W LL
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 608
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
GC+ + D+ L AE++ +PE+T +++L+N+YAEA +E ++R+ + +K L+K
Sbjct: 609 CGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRK 668
Query: 616 DTGCSWTELQNKMHYF-STSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYS 667
+ GCSW E++ +++ F S + + + ++ ++ + + GY P Y+
Sbjct: 669 NPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYA 721
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 224/452 (49%), Gaps = 25/452 (5%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F ++ + ++ ++ R A +LFD++ +R+VISW+++ISG+ G+ E L ++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M+ ++ + T + + CA+ G GK +H +S E + SN L++MY KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L A VF+ ERN +SW S+++ Y + G + + K GV + + S+L
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILH 360
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
ACA G+L G +H + + + FV L+++YAKC ++ A+ VFS + + D+ +
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIIS 420
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ ++G L P T + +L A A + G+++H I+
Sbjct: 421 WNTMVG---------------------ELKPDSRTMACILPACASLSALERGKEIHGYIL 459
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
+ G+SS VAN ++D Y KC +L + FD + D+VSW +IAG+ + EAI
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIA 519
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--SALVDM 423
+M G P+ ++ +IL S +E G + I+K F+ + + +VD+
Sbjct: 520 TFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDL 578
Query: 424 YAKCGRLNDARKVFDHLS-SKNLVSWNTMLVG 454
++ G L+ A K + L + + W +L G
Sbjct: 579 LSRTGNLSKAYKFIETLPIAPDATIWGALLCG 610
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 196/428 (45%), Gaps = 52/428 (12%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I S F + N LL MY K ++ A ++F++M ERNV+SW+++I+G+++ G + A+
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAI 337
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M ++ + + ACA G +GK++H + + + N V N L++MY
Sbjct: 338 ILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMY 397
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A VF + ++ ISW +++ GE + + A
Sbjct: 398 AKCGSMEGANSVFSTMVVKDIISWNTMV------GE---------------LKPDSRTMA 436
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L ACA L L+ G +IH + + D+ VA L++LY KC L LA +F I
Sbjct: 437 CILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 496
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
DL +W+ +I GY G EAI F +M +G+ P EV+F +L A + H
Sbjct: 497 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS-----------H 545
Query: 302 SLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSWN 348
S +++ G+ F + N ++D S+ L ++ K + + D W
Sbjct: 546 SGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWG 605
Query: 349 ALIAGHLASCHYGEAIEL---LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
AL+ G C IEL + + +FE N Y + NI ++ E K+ I
Sbjct: 606 ALLCG----CRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKI 661
Query: 406 VKPGFDSN 413
K G N
Sbjct: 662 GKKGLRKN 669
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 132/528 (25%), Positives = 229/528 (43%), Gaps = 83/528 (15%)
Query: 38 ERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE 97
+ V ++A I F Q+G E A+ + +C E TY + CA GK+
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMEL--VCMCQKSELETKTYGSVLQLCAGLKSLTDGKK 120
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
+H ++ S D +L + L+S Y CG+
Sbjct: 121 VHS-------------------------IIKSNSVGVDEAL------GLKLVSFYATCGD 149
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
G ++F K V + F ++ A +G+ K + + ++ + +E
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNF----MVSEYAKIGDFKESICLFKIMVEKGIE-------- 197
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
++ + AS +F + D+ +W+++I GY G + ++ +M G+
Sbjct: 198 -------GKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVD 250
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
T VL A+ G+ +HSL IK F +NT+LD YSKC L+ +L+ F+
Sbjct: 251 LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 310
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
+M E +VVSW ++IAG+ AI LL+ M EG ++ ++IL+ + +++
Sbjct: 311 KMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDN 370
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
GK H I SN+ + +AL+DMYAKCG + A VF + K+++SWNTM+
Sbjct: 371 GKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV----- 425
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
++KP+ T +L AC + +E G ++R+ S R
Sbjct: 426 ----------------GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDR-- 467
Query: 518 HIA-SVVHLF---ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
H+A ++V L+ G R ++ I S + V W +++G H
Sbjct: 468 HVANALVDLYVKCGVLGLARLLFDMIPSKDL----VSWTVMIAGYGMH 511
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 102/240 (42%), Gaps = 38/240 (15%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ + N L+ +YVK + A+ LFD +P ++++SW+ +I+G+ G A
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
+ F M +EP+ +++ + AC+ G G M +E C+++
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVD 577
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
+ + G LS A +F+ + ++ W +LL CG
Sbjct: 578 LLSRTGNLSKAYKFIETLPIAPDATIWGALL-----CG---------------------- 610
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
C + ++++ ++ VF+ E + + L N+YA+ EK + R+ I
Sbjct: 611 --------CRIYHDIELAEKVAERVFELEPENTGYYVL-LANIYAEAEKREEVKRMREKI 661
>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 729
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/619 (31%), Positives = 325/619 (52%), Gaps = 9/619 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G + + + L+ +Y+K + A+ +FD+M R+V+SW+ LI G+SQ G A+
Sbjct: 83 LKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAI 142
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M+ +PN T V + +C G+ IHG ++G L+SH++N L++MY
Sbjct: 143 QLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMY 202
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC L ++Q +FD E++ +SW +++ Y Q G + F K G S +
Sbjct: 203 AKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIM 262
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+++ A A N +H V KC D V L+ LYAK + A +++
Sbjct: 263 NLVSANAFPEN------VHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTK 316
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
DL +A+I Y++ G A++ F++ + P V VL + G H
Sbjct: 317 DLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFH 376
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+K G S+ VAN ++ YS+ + +E +L F +M E +++WN++I+G + +
Sbjct: 377 GYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSS 436
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A+EL +M G P+ T +++L+ + + G+ H I++ IG+AL+
Sbjct: 437 DAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALI 496
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY+KCGRL+ A KVF ++ L +WN ++ GY+ +GL A YS +QE +KP+
Sbjct: 497 DMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKI 556
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+GVL+AC H GLV G YFN M +++G+ P + H A +V L G + A EFI
Sbjct: 557 TFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINK 616
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
I+P+ VW LL+ C +++ LG A+K+ + ++ ++++SN+YA WD+
Sbjct: 617 MEIQPDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDV 676
Query: 602 AKVRKIMKEKSLKKDTGCS 620
A+VR++MK+ GCS
Sbjct: 677 ARVREMMKDSG---GDGCS 692
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 232/509 (45%), Gaps = 22/509 (4%)
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSA---------CASRGDARSGKEIHGRMYRSGLELN 110
AL FR ++ + PN +T+ + A C S A ++I + + G+
Sbjct: 32 ALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTA-ALQARQIQTQCLKRGVNQF 90
Query: 111 SHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK 170
HV LI++Y K G S A+ +FD R+ +SW L+ Y Q G H +++F+ +
Sbjct: 91 IHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLR 150
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDL 230
++ + S+L +C + G IH K D + L+++YAKC+ L+
Sbjct: 151 ENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEA 210
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
+ +F + + +W+ +IG Y Q G +AI F +M G PS VT ++ A A
Sbjct: 211 SQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAF 270
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ +H ++K GF++ V +++ Y+K + + + D+++ A+
Sbjct: 271 PE------NVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAI 324
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
I+ + A+E + P+ +L+ ++ G H VK G
Sbjct: 325 ISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGL 384
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
++ ++ + L+ +Y++ + A +F + K L++WN+M+ G Q G +A+E++S
Sbjct: 385 SNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSE 444
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI--ASVVHLFAC 528
M KP+ T +LS C +G + G + ++R++ R++ +++ +++
Sbjct: 445 MSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNN---VRVEDFIGTALIDMYSK 501
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G+ A E + + +P W ++SG
Sbjct: 502 CGRLDYA-EKVFYNIKDPCLATWNAIISG 529
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 174/364 (47%), Gaps = 24/364 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + L+ +Y K N A++L+ P +++I+ +A+IS +S+ G E A
Sbjct: 278 VVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESA 337
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F + ++P+ +G + + G HG +SGL + V+N LI++
Sbjct: 338 VECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISL 397
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + + +A +F E+ I+W S++S Q G+ +++F G +
Sbjct: 398 YSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITI 457
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L C LGNL++G +HS + + + + F+ LI++Y+KC +LD A +VF NI+
Sbjct: 458 ASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKD 517
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
P L W+A+I GY+ G A + K+ GL P ++TF VL A
Sbjct: 518 PCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACT----------- 566
Query: 301 HSLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSW 347
H ++ +G F + ++ K L +E+++ ++M+ + D W
Sbjct: 567 HGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQPDSAVW 626
Query: 348 NALI 351
AL+
Sbjct: 627 GALL 630
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/683 (28%), Positives = 350/683 (51%), Gaps = 22/683 (3%)
Query: 1 MITSGFHPNVITYNHLLLMY-------------VKFSRINDAQKLFDEMPERNVISWSAL 47
++ S F + I YN LL MY F+ + +++FD M +RNV++W+ +
Sbjct: 130 VLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTM 189
Query: 48 ISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL 107
IS + + A FR M+ + P ++V A D + ++G + + G
Sbjct: 190 ISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNANVLYGLVVKLGS 249
Query: 108 EL--NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF 165
+ + V + I MY + G + A+ +FD LERN+ W +++ Y Q + + +F
Sbjct: 250 DFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLF 309
Query: 166 LLSRKS-GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK 224
+ +S + + + S L A + L L++G Q+H+ + K + + +I +Y++
Sbjct: 310 VQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSR 369
Query: 225 CEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYV 284
C + + +VFSN+ D+ W+ ++ + Q G E + L M G M VT + +
Sbjct: 370 CGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTAL 429
Query: 285 LGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDV 344
L ++++ G+Q H+ +I+ G F + + ++D Y+K L+ + + F++ ++D
Sbjct: 430 LSLASNLRSQEIGKQAHAYLIRHGIQ-FEGMDSYLIDMYAKSGLITTAQQLFEKNSDYDR 488
Query: 345 --VSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
+WNA+IAG+ + E + + M+ + PN T ++IL + + I GKQ H
Sbjct: 489 DEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIH 548
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
++ + NV +G+AL+DMY+K G + A VF KN V++ TM+ Y QHG+G
Sbjct: 549 GFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGE 608
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
AL ++ M + IKP+ TF+ +LSAC + GLV+EG F SM R++ I P +H V
Sbjct: 609 RALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCV 668
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPED 581
+ G+ AYEF+K E N +W LL C+ H + LG+ A K+L +
Sbjct: 669 ADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLEMEKGS 728
Query: 582 --TSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQF 639
T H++LSN+YA WD +VRK M++K L K+ GCSW E+ ++ F +
Sbjct: 729 SLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHP 788
Query: 640 QGIDLHEVMNQLSVHLFDGGYVP 662
Q ++++++ +L++ + D GY P
Sbjct: 789 QCAEIYQMLEKLAMEMKDAGYKP 811
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 242/501 (48%), Gaps = 20/501 (3%)
Query: 27 NDAQKLFDEMPERNVISWSALISGFSQIGMP-EVALNYFRLMVCCVLEPNYYTYVGAVSA 85
+ A LFD +P + W+ +I GF MP + L Y R+ + + YT+ + A
Sbjct: 54 HQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKA 113
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC----GLLSSA---------QF 132
CA + GK +H + RS + V N L+NMY C L +A +
Sbjct: 114 CAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRR 173
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VFD +RN ++W +++S Y + + K+F + G+ + S +V A + +
Sbjct: 174 VFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSD 233
Query: 193 LKVGMQIHSLVFKCALEF--DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
++ LV K +F D FV I +YA+ +D A +F + W+ +I
Sbjct: 234 YDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMI 293
Query: 251 GGYAQLGKACEAIDLFVK-MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
GGY Q EAIDLFV+ M S + +VTF L A + ++ GRQLH+ I+K
Sbjct: 294 GGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSST 353
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
+ N ++ YS+C + S K F M E DVV+WN +++ + + E + L+
Sbjct: 354 ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFA 413
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M +G + T + +L+++S++ + E GKQ H +++ G + S L+DMYAK G
Sbjct: 414 MQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDSYLIDMYAKSGL 472
Query: 430 LNDARKVFDHLS--SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
+ A+++F+ S ++ +WN M+ GY Q+GL E ++ M E ++PN T +L
Sbjct: 473 ITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASIL 532
Query: 488 SACVHIGLVEEGWHYFNSMIR 508
AC +G + G IR
Sbjct: 533 PACNPMGTIGLGKQIHGFAIR 553
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/653 (30%), Positives = 340/653 (52%), Gaps = 56/653 (8%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+ +TYN ++ Y+ ++ + A+K+F++MP+R++ISW+ ++SG+ + G A F M
Sbjct: 90 STVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP 149
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
E + ++ N +++ + + G +
Sbjct: 150 ----EKDVVSW-----------------------------------NAMLSGFAQNGFVE 170
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ +FD L +N ISW LLS+Y Q G ++F K I ++C ++G
Sbjct: 171 EARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLF--DSKMDWEIVSWNC--LMGGYV 226
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L SL + + DK +I YA+ L A R+F + + D+ AW+A
Sbjct: 227 RKKRLD---DARSLFDRMPVR-DKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTA 282
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
++ G+ Q G EA +F +M +EV+++ ++ + ++ R+L +
Sbjct: 283 MVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMPSRN 338
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
SS+ NT++ Y++C ++++ FDEM + D +SW A+I+G+ S EA+ L
Sbjct: 339 TSSW----NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFI 394
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M +G N + L+ ++I A+E GKQ H +VK GF + + G+AL+ MY KCG
Sbjct: 395 KMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCG 454
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ +A VF+ ++ K++VSWNTM+ GYA+HG G+EAL ++ M+ IKP+D T +GVLS
Sbjct: 455 SIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLS 513
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H G V++G YFNSM +++GI+ H ++ L G+ A +KS P P+
Sbjct: 514 ACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDA 573
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
W LL + H D LG AAEK+ +P+++ +++LSN+YA + W E ++R M
Sbjct: 574 ATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKM 633
Query: 609 KEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
++K +KK G SW E+QNK H F+ + + ++ + +L + L G+V
Sbjct: 634 RDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFV 686
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GF I N LL MY K I +A +F+++ E++++SW+ +I+G+++ G + A
Sbjct: 431 LVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEA 490
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F M + +P+ T VG +SAC+ G G E MY++ G+ N+ C+I+
Sbjct: 491 LALFESMKMTI-KPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMID 549
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHG 161
+ G+ G L A + ++ +W +LL + +HG
Sbjct: 550 LLGRAGRLDEALNLMKSMPFYPDAATWGALLGA-----SRIHG 587
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 129/286 (45%), Gaps = 29/286 (10%)
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
ES + + + D+V WN I+ ++ A+ + M + TY+ +++
Sbjct: 47 ESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGM----RRRSTVTYNAMISGYL 102
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
+ ++ + + D +++ + ++ Y K G L+ AR +F+ + K++VSWN
Sbjct: 103 SNNKFDCARK----VFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNA 158
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
ML G+AQ+G EA +I+ M + N+ ++ G+LSA V G +E+ F+S
Sbjct: 159 MLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDS----- 209
Query: 511 GISPRMD-HIASVVHLFACRGQTRR---AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVL 566
+MD I S L + +R A P+ +K+ W +++G + L
Sbjct: 210 ----KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR-DKISWNIMITGYAQNGLLSE 264
Query: 567 GRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
R E++ D A + + + + M DE ++ + M EK+
Sbjct: 265 ARRLFEEL---PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKN 307
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 205/669 (30%), Positives = 350/669 (52%), Gaps = 27/669 (4%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
LL MY K S + DA+K+FD + + V+ W+A+I+ ++Q E A+ F M+ ++
Sbjct: 141 LLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAE 200
Query: 76 YYTYVGAVSACASRGDARSGKEI--------HGRMYRSGLELNSHVSNCLINMYGKCGLL 127
T++G + AC+ D K + H ++ +S + L+N YG CG L
Sbjct: 201 RITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLH------DSSFATALVNFYGSCGDL 254
Query: 128 SSAQFVFDASLERNSISWV---SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
A F R+ + + ++++ Y Q L++F + GV + +C +VL
Sbjct: 255 EQAFRAF----SRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVL 310
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLASRVFSNIQLPD 242
AC+ L+ G IH F + FD+ V G LIN+Y KC L+ A VF ++Q D
Sbjct: 311 NACSGPRGLEEGRIIHG--FMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRD 368
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ +W+ +I + Q + EA+ L M G+ +++F L A + GR +HS
Sbjct: 369 VISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHS 428
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG- 361
I++ G + + N +LD Y C+ +++ + F M D VSWNA+I + A
Sbjct: 429 WIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSS 488
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA+ L + M G P++ ++ L+ + ++ GK H I + G +SN+ + +A++
Sbjct: 489 EALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVL 548
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
+MYAK G L ARK+F + +++SWN M+ +AQHG + L + M PND
Sbjct: 549 NMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDV 608
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDH-GISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ V+SAC H GLV++G F S++ D ISPR +H +V L A G+ A +FI
Sbjct: 609 TFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIA 668
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
++P++P++V+ +L K HKD+ R +AE ++ P+ ++A+++LSN+Y E DE
Sbjct: 669 AAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDE 728
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
AK+R++M EK+++K+ S ++ ++H F T + ++ E + +LS+ + GY
Sbjct: 729 GAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGY 788
Query: 661 VPDPIYSSH 669
PD H
Sbjct: 789 TPDTTLMLH 797
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 167/554 (30%), Positives = 276/554 (49%), Gaps = 15/554 (2%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MYV + DA+ FD MP ++ ++W+ LI QIG E AL+ FR M + P
Sbjct: 39 LVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPV 98
Query: 76 YYTYVGAVSACASRGDA-RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
+V + AC++ + G+ IHG + + +E + +VS L++MYGKC + A+ VF
Sbjct: 99 NRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVF 158
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D + + W +++++Y Q H +++F GV + VL AC+ L +L+
Sbjct: 159 DGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLE 218
Query: 195 VGMQIHSLVFKCALE------FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
V LV C E D A L+N Y C L+ A R FS +L +L +A
Sbjct: 219 VA----KLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRHRL-ELILATA 273
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I Y Q + EA++LF M G+ + VL A + + GR +H + ++
Sbjct: 274 MITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIR 333
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F N +++ Y KC LEE+++ F M DV+SWN +IA H + EA+ LL
Sbjct: 334 FDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLH 393
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M +G + ++ N L + + A+ G+ H IV+ G ++V++ +A++DMY C
Sbjct: 394 LMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCK 453
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGY-AQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
+DA +VF + ++ VSWN M+ Y AQ L EAL ++ MQ + P+ +F+ L
Sbjct: 454 STDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAAL 513
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC + EG + IR+ G+ M +V++++A G A + P+ P+
Sbjct: 514 SACAAQASLAEG-KLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPL-PD 571
Query: 548 KVVWRCLLSGCKTH 561
+ W ++S H
Sbjct: 572 VISWNGMISAFAQH 585
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 138/499 (27%), Positives = 252/499 (50%), Gaps = 28/499 (5%)
Query: 90 GDARS---GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV 146
D+RS GKE+H R+ +S ++ + + L+ MY CG L A+ FD +++++W
Sbjct: 9 ADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWA 68
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN-LKVGMQIHSLVFK 205
L+ ++ Q G+ L +F + GVA + +VLGAC+ L+ G +IH ++
Sbjct: 69 RLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRG 128
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
A+E D +V+ L+++Y KC ++ A +VF I+ + W+A+I YAQ +AI +
Sbjct: 129 TAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQV 188
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK------MGFSSFTFVANTV 319
F M G+ +TF VL A + +K+ + +L L ++ + SSF A +
Sbjct: 189 FYAMLLEGVKAERITFIGVLDACSKLKD-LEVAKLVKLCVEEREHDHLHDSSF---ATAL 244
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
++FY C LE++ + F +++ A+I + + EA+EL K ML EG +
Sbjct: 245 VNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDR 303
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
+LN S +E G+ H + + FD +V G+AL++MY KCG L +A +VF
Sbjct: 304 IACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRS 363
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ ++++SWNT++ + QH EAL + +MQ + +K + +F+ L C + +G
Sbjct: 364 MQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKG 423
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK 559
+S I + GI + +++ ++ T A ++ + ++V W +++
Sbjct: 424 -RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVR-DQVSWNAMITA-- 479
Query: 560 THKDLVLGRYAAEKILSTD 578
YAA+ LS++
Sbjct: 480 ---------YAAQPRLSSE 489
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 133/530 (25%), Positives = 223/530 (42%), Gaps = 69/530 (13%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L A +L +G ++H+ + K A++ F+ L+ +Y C L A F + +
Sbjct: 2 ADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPV 61
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA-FADVKETIGGRQ 299
D W+ LI + Q+G + +A+ LF M G+ P F VLGA AD + GR+
Sbjct: 62 QDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRR 121
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H ++ S +V+ T+L Y KC +E++ K FD + VV WNA+I + H
Sbjct: 122 IHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD--SNVVIG 417
+ +AI++ ML EG T+ +L+ S + +E K C+ + D +
Sbjct: 182 HEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFA 241
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ALV+ Y CG L A + F L+ M+ Y Q EALE++ +M +K
Sbjct: 242 TALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVK 300
Query: 478 PNDNTFIGVLSACVHIGLVEEGW--HYF-------------NSMIRDHGISPRMDHIASV 522
+ + VL+AC +EEG H F N++I +G ++ V
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEV 360
Query: 523 VH------------LFACRGQTRRAYE------FIKSSPIEPNKVVWRCLLSGCKTHKDL 564
+ A GQ + E ++ ++ +K+ + L C T + L
Sbjct: 361 FRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEAL 420
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLSN----VYAEANMWDETAKVRKIMKEKSLKKDTGCS 620
GR I+ + A +ML N +Y D+ ++V + MK + S
Sbjct: 421 AKGRMIHSWIVES---GIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRD-----QVS 472
Query: 621 WTELQNKMHYFSTSRFAQ-----FQGIDLHEVMNQLSVHLFDGGYVPDPI 665
W + Y + R + FQ + LH G++PD I
Sbjct: 473 WNAMITA--YAAQPRLSSEALLLFQQMQLH-------------GFMPDVI 507
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 145/283 (51%), Gaps = 1/283 (0%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F +V N L+ MY K + +A ++F M R+VISW+ +I+ Q AL+
Sbjct: 334 FDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLH 393
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
LM ++ + ++V A+ CA+ G+ IH + SG++ + + N +++MYG C
Sbjct: 394 LMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCK 453
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSY-CQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
A VF A R+ +SW +++++Y Q L +F + G S + L
Sbjct: 454 STDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAAL 513
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA +L G +H + + LE + VA ++N+YAK L LA ++F + LPD+
Sbjct: 514 SACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVI 573
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+W+ +I +AQ G A + + F +M G +P++VTF V+ A
Sbjct: 574 SWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSA 616
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
++ +L AD + G+++H+ I K F+ + ++ Y C L ++ FD M
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI-SSDIPAIEWGK 399
D ++W LI H +A+ L + M EG P + +L S+D +E G+
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
+ H + +S+ + + L+ MY KC + DARKVFD + K +V WN M+ YAQ
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+A++++ M +K TFIGVL AC
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDAC 211
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 129/259 (49%), Gaps = 10/259 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGF-SQIGMPEV 59
++ SG +V+ N +L MY +DA ++F M R+ +SW+A+I+ + +Q +
Sbjct: 430 IVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSE 489
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL F+ M P+ ++V A+SACA++ GK +H R+ +GLE N V+N ++N
Sbjct: 490 ALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLN 549
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY K G L A+ +F + ISW ++S++ Q G L+ F G ++ +
Sbjct: 550 MYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVT 609
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG-----LINLYAKCEKLDLASRV 234
SV+ AC+ G +K G+Q L +F +++L A+ KLD A +
Sbjct: 610 FVSVVSACSHGGLVKDGVQ---LFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKF 666
Query: 235 FSNIQL-PDLTAWSALIGG 252
+ L PD S ++G
Sbjct: 667 IAAAPLKPDRVIHSTMLGA 685
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y+++L++ +D +++ GK+ H I K D +G LV MY CG L DA+ FD +
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC-VHIGLVEEGW 500
++ ++W ++ + Q G +AL ++ MQ + P + F+ VL AC L+EEG
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120
Query: 501 HYF-----NSMIRDHGISPRMDHI 519
+M DH +S + H+
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHM 144
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/683 (28%), Positives = 349/683 (51%), Gaps = 22/683 (3%)
Query: 1 MITSGFHPNVITYNHLLLMY-------------VKFSRINDAQKLFDEMPERNVISWSAL 47
++ S F + I YN LL MY F+ + +++FD M +RNV++W+ +
Sbjct: 130 VLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTM 189
Query: 48 ISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL 107
IS + + A FR M+ + P ++V A D + ++G + + G
Sbjct: 190 ISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGS 249
Query: 108 EL--NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF 165
+ + V + I MY + G + A+ +FD LERN+ W +++ Y Q + + +F
Sbjct: 250 DYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLF 309
Query: 166 LLSRKS-GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK 224
+ +S + + + S L A + L L +G Q+H+ + K + + +I +Y++
Sbjct: 310 VQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSR 369
Query: 225 CEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYV 284
C + + +VFSN+ D+ W+ ++ + Q G E + L +M G M VT + +
Sbjct: 370 CGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTAL 429
Query: 285 LGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD--EH 342
L ++++ G+Q H+ +I+ G F + ++D Y+K L+ + + F++ +
Sbjct: 430 LSLASNLRSQEIGKQAHAYLIRHGIQ-FEGMDGYLIDMYAKSGLITTAQQLFEKNSXYDR 488
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
D +WNA+IAG+ + E + + M+ + PN T ++IL + + I GKQ H
Sbjct: 489 DEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIH 548
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
++ + NV +G+AL+DMY+K G + A VF KN V++ TM++ Y QHG+G
Sbjct: 549 GFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGE 608
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
AL ++ M + IKP+ TF+ +LSAC + GLV+EG F SM R++ I P +H V
Sbjct: 609 RALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCV 668
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPED 581
+ G+ AYEF+K E N +W LL C+ H + LG+ A K+L +
Sbjct: 669 ADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLEMEKGS 728
Query: 582 --TSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQF 639
T H++LSN+YA WD +VRK M++K L K+ GCSW E+ ++ F +
Sbjct: 729 XLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHP 788
Query: 640 QGIDLHEVMNQLSVHLFDGGYVP 662
Q ++++++ +L++ + D GY P
Sbjct: 789 QCAEIYQMLEKLAMEMKDAGYKP 811
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 145/501 (28%), Positives = 242/501 (48%), Gaps = 20/501 (3%)
Query: 27 NDAQKLFDEMPERNVISWSALISGFSQIGMP-EVALNYFRLMVCCVLEPNYYTYVGAVSA 85
+ A LFD +P + W+ +I GF MP + L Y R+ + + YT+ + A
Sbjct: 54 HQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKA 113
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC----GLLSSA---------QF 132
CA + GK +H + RS + V N L+NMY C L +A +
Sbjct: 114 CAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRR 173
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VFD +RN ++W +++S Y + + K+F + G+ + S +V A + +
Sbjct: 174 VFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMND 233
Query: 193 LKVGMQIHSLVFKCALEF--DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
++ LV K ++ D FV I +YA+ +D A +F + W+ +I
Sbjct: 234 YDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMI 293
Query: 251 GGYAQLGKACEAIDLFVK-MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
GGY Q EAIDLFV+ M S +VTF L A + ++ GRQLH+ I+K
Sbjct: 294 GGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSST 353
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
+ N ++ YS+C + S K F M E DVV+WN +++ + + E + L+ +
Sbjct: 354 ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFE 413
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M +G + T + +L+++S++ + E GKQ H +++ G + G L+DMYAK G
Sbjct: 414 MQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGY-LIDMYAKSGL 472
Query: 430 LNDARKVFDHLS--SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
+ A+++F+ S ++ +WN M+ GY Q+GL E ++ M E ++PN T +L
Sbjct: 473 ITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASIL 532
Query: 488 SACVHIGLVEEGWHYFNSMIR 508
AC +G + G IR
Sbjct: 533 PACNPMGTIGLGKQIHGFAIR 553
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 312/562 (55%), Gaps = 4/562 (0%)
Query: 115 NCLINMYGKCGLLSSAQFVFDASLE--RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
N LIN+Y KCG L+ A +F + + ++W SL++ H+ L +F R SG
Sbjct: 181 NNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSG 240
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
++F+ +S+L A A + G Q+HSL+ K + + FV L+++YAKC + A
Sbjct: 241 PYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAV 300
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADV 291
RVF + +L +W+++I G+ A+ +F + ++P+EV+ S VL A A++
Sbjct: 301 RVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANM 360
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
GRQ+H +++K G T+V N+++D Y KC +E +K F + + DVV+WN L+
Sbjct: 361 GGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLV 420
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
G + + + EA M EG P+ ++S +L+ S+ + A+ G H I+K G+
Sbjct: 421 MGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYV 480
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
N+ I +L+ MYAKCG L DA +VF+ + N++SW M+ Y HG + +E++ M
Sbjct: 481 KNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHM 540
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
I+P+ TF+ VLSAC H G VEEG +FNSM + H ++P +H A +V L G
Sbjct: 541 LSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGW 600
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
A FI+S P++P VW LL C+ + +L +GR AAE++ +P + +++L+N+
Sbjct: 601 LDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANM 660
Query: 592 YAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
+ +E +VR++M ++K+ GCSW +++N F+ + ++++++ +L
Sbjct: 661 CTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKL 720
Query: 652 SVHLFDGGYVPDPIY-SSHFEE 672
+ GYV + + ++H EE
Sbjct: 721 EKLVKKKGYVAETEFVTNHLEE 742
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 144/501 (28%), Positives = 252/501 (50%), Gaps = 24/501 (4%)
Query: 13 YNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPEVALNYFRLMVCC 70
+N+L+ +Y K +N A LF + +++W++LI+ S M AL+ F M C
Sbjct: 180 FNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCS 239
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
PN +T+ +SA A+ G+++H +++ G + N V L++MY KC + SA
Sbjct: 240 GPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSA 299
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAV 189
VFD ERN +SW S++ + + + +F + R+ V +E S +SVL ACA
Sbjct: 300 VRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACAN 359
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
+G L G Q+H +V K L +V L+++Y KC D ++F + D+ W+ L
Sbjct: 360 MGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVL 419
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
+ G+ Q K EA + F M G++P E +FS VL + A + G +H IIK+G+
Sbjct: 420 VMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGY 479
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
+ +++ Y+KC L ++ + F+ +++H+V+SW A+I+ + + IEL +
Sbjct: 480 VKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEH 539
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWG-------KQTHCCIVKPGFDSNVVIGSALVD 422
ML EG P+ T+ +L+ S +E G K+ H + PG + + +VD
Sbjct: 540 MLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH--DMNPGPEHY----ACMVD 593
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG---LGREALEIYSMMQENKIKP 478
+ + G L++A++ + + K S W +L ++G +GREA E M+
Sbjct: 594 LLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPY---- 649
Query: 479 NDNTFIGVLSACVHIGLVEEG 499
N ++ + + C G +EE
Sbjct: 650 NPGNYVLLANMCTRSGRLEEA 670
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 151/284 (53%), Gaps = 1/284 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N+ L+ MY K + ++ A ++FD+MPERN++SW+++I GF + + A+ F
Sbjct: 275 GFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVF 334
Query: 65 R-LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+ ++ + PN + +SACA+ G G+++HG + + GL ++V N L++MY K
Sbjct: 335 KDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFK 394
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
C +F +R+ ++W L+ + Q + F + R+ G+ E S ++V
Sbjct: 395 CRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTV 454
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L + A L L G IH + K + + LI +YAKC L A +VF I+ ++
Sbjct: 455 LHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNV 514
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+W+A+I Y G A + I+LF M S G+ PS VTF VL A
Sbjct: 515 ISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSA 558
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 141/238 (59%), Gaps = 11/238 (4%)
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH--DVVSWNALIAGHLA 356
Q+H+ II ++S F+ N +++ Y+KC L ++L F H +V+W +LI HL+
Sbjct: 163 QIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLIT-HLS 221
Query: 357 SCHYG---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
H+ +A+ L M G PN +T+S+IL+ S+ + G+Q H I K GFD+N
Sbjct: 222 --HFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDAN 279
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS-MMQ 472
+ +G+ALVDMYAKC ++ A +VFD + +NLVSWN+M+VG+ + L A+ ++ +++
Sbjct: 280 IFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLR 339
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL-FACR 529
E + PN+ + VLSAC ++G + G +++ +G+ P + S++ + F CR
Sbjct: 340 EKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVK-YGLVPLTYVMNSLMDMYFKCR 396
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 27/285 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G P N L+ MY K ++ KLF + +R+V++W+ L+ GF Q E A
Sbjct: 373 VVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEA 432
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
NYF +M + P+ ++ + + AS G IH ++ + G N + LI M
Sbjct: 433 CNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITM 492
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L A VF+ + N ISW +++S+Y G +++F G+ S +
Sbjct: 493 YAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTF 552
Query: 181 ASVLGACAVLGNLKVGM-------QIHSLV-----FKCALEFDKFVAMGLINLYAKCEKL 228
VL AC+ G ++ G+ +IH + + C +++L + L
Sbjct: 553 VCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYAC-----------MVDLLGRAGWL 601
Query: 229 DLASRVFSNIQL-PDLTAWSALIGG---YAQLGKACEAIDLFVKM 269
D A R ++ + P + W AL+G Y L EA + +M
Sbjct: 602 DEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEM 646
>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Glycine max]
Length = 770
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 201/695 (28%), Positives = 349/695 (50%), Gaps = 76/695 (10%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H N+ ++N +L Y K + A +LF +MP+RN +S + LIS + G AL+ +
Sbjct: 69 HKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDS 128
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
++ + P++ T+ SAC S DA G+ HG + + GLE N +V N L+ MY KCGL
Sbjct: 129 VMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGL 188
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGE----------------------------- 157
+ A VF E N +++ +++ Q +
Sbjct: 189 NADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGV 248
Query: 158 ----------------HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK------V 195
+ G ++ LS K G C S+L A +G++ V
Sbjct: 249 CAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFV 308
Query: 196 GMQIHSLVF---------------KCALEFDKFVAMGL-------INLYAKCEK---LDL 230
+ HS+V K A + + G IN+ C K +
Sbjct: 309 NLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRT 368
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
++F + P LT+W+A++ GY Q EA++LF KM P T + +L + A+
Sbjct: 369 GRQIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSCAE 428
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ G+++H+ K GF +VA+++++ YSKC +E S F ++ E DVV WN++
Sbjct: 429 LGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVVCWNSM 488
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
+AG + +A+ K M G P+ ++++ +++ + + ++ G+Q H IVK GF
Sbjct: 489 LAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGF 548
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
++ +GS+L++MY KCG +N AR FD + +N V+WN M+ GYAQ+G G AL +Y+
Sbjct: 549 LDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNALCLYND 608
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M + KP+D T++ VL+AC H LV+EG FN+M++ +G+ P++ H ++ + G
Sbjct: 609 MISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCIIDCLSRAG 668
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN 590
+ + + P + + VVW +LS C+ H +L L + AAE++ DP++++++++L+N
Sbjct: 669 RFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRLDPQNSASYVLLAN 728
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQ 625
+Y+ WD+ VR +M ++KD G S + Q
Sbjct: 729 MYSSLGKWDDAHVVRDLMSHNQVRKDPGYSRNDTQ 763
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/516 (27%), Positives = 236/516 (45%), Gaps = 78/516 (15%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
V C + SGK +H R++R L ++ +SN I +Y KC ++SA VFD +N
Sbjct: 13 VQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPHKNI 72
Query: 143 ISWVSLLSSYCQ-------------------------------CGEHVHGLKIFLLSRKS 171
SW ++L++YC+ CG L +
Sbjct: 73 FSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLD 132
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
GV S + A+V AC L + G + H +V K LE + +V L+ +YAKC A
Sbjct: 133 GVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADA 192
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
RVF +I P+ ++ ++GG AQ + EA +LF M G+ V+ S +LG A
Sbjct: 193 LRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKG 252
Query: 292 KETIG----------GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
+ +G G+Q+H+L +K+GF + N++LD Y+K ++ + K F ++
Sbjct: 253 ERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNR 312
Query: 342 HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
H VVSWN +IAG+ C+ +A E L+ M +G+ P+ TY N+L T
Sbjct: 313 HSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINML--------------T 358
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
C K G + R++FD + +L SWN +L GY Q+
Sbjct: 359 AC---------------------VKSGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADH 397
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
REA+E++ MQ P+ T +LS+C +G +E G ++ + G + +S
Sbjct: 398 REAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKE-VHAASQKFGFYDDVYVASS 456
Query: 522 VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++++++ G+ + P E + V W +L+G
Sbjct: 457 LINVYSKCGKMELSKHVFSKLP-ELDVVCWNSMLAG 491
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 222/476 (46%), Gaps = 41/476 (8%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF ++ N LL MY K ++ A+K+F + +V+SW+ +I+G+ E A Y
Sbjct: 279 GFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYL 338
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M EP+ TY+ ++AC GD R+G++I
Sbjct: 339 QRMQSDGYEPDDVTYINMLTACVKSGDVRTGRQI-------------------------- 372
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
FD + SW ++LS Y Q +H +++F + + A +L
Sbjct: 373 ---------FDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVIL 423
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+CA LG L+ G ++H+ K D +VA LIN+Y+KC K++L+ VFS + D+
Sbjct: 424 SSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVV 483
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W++++ G++ +A+ F KM G PSE +F+ V+ + A + G+Q H+ I
Sbjct: 484 CWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQI 543
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+K GF FV +++++ Y KC + + FD M + V+WN +I G+ + A+
Sbjct: 544 VKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNAL 603
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALVDM 423
L DM+ G P+ TY +L S ++ G + + + K G V + ++D
Sbjct: 604 CLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCIIDC 663
Query: 424 YAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG----LGREALEIYSMMQEN 474
++ GR N+ + D + K + V W +L H R A E+Y + +N
Sbjct: 664 LSRAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRLDPQN 719
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 179/370 (48%), Gaps = 6/370 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M + G+ P+ +TY ++L VK + +++FD MP ++ SW+A++SG++Q A
Sbjct: 341 MQSDGYEPDDVTYINMLTACVKSGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADHREA 400
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ FR M P+ T +S+CA G +GKE+H + G + +V++ LIN+
Sbjct: 401 VELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINV 460
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + ++ VF E + + W S+L+ + L F R+ G SEFS
Sbjct: 461 YSKCGKMELSKHVFSKLPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSF 520
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+V+ +CA L +L G Q H+ + K D FV LI +Y KC ++ A F +
Sbjct: 521 ATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPG 580
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ W+ +I GYAQ G A+ L+ M SSG P ++T+ VL A + G ++
Sbjct: 581 RNTVTWNEMIHGYAQNGDGHNALCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEI 640
Query: 301 -HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASC 358
++++ K G ++D S+ E D M + D V W + L+SC
Sbjct: 641 FNAMLQKYGVVPKVAHYTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVWEVV----LSSC 696
Query: 359 HYGEAIELLK 368
+ L K
Sbjct: 697 RIHANLSLAK 706
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 167/391 (42%), Gaps = 78/391 (19%)
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
K + G+ +H+ + ++ S TF++N ++ YSKC+ + + FD + ++ SWNA++
Sbjct: 20 KAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPHKNIFSWNAIL 79
Query: 352 AGH------------------------------LASCHY-GEAIELLKDMLFEGHCPNLY 380
A + + C Y +A++ ++ +G P+
Sbjct: 80 AAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLDGVIPSHI 139
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T++ + + + + G++TH ++K G +SN+ + +AL+ MYAKCG DA +VF +
Sbjct: 140 TFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDI 199
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC---------- 490
N V++ TM+ G AQ +EA E++ +M I+ + + +L C
Sbjct: 200 PEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPC 259
Query: 491 ----------------VHIGLVEEGWHYFNSMIRDHGISPRMDHIASV-VHL-------- 525
V +G E H NS++ + MD V V+L
Sbjct: 260 HGISTNAQGKQMHTLSVKLGF-ERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSW 318
Query: 526 ------FACRGQTRRAYEFI---KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
+ R + +A E++ +S EP+ V + +L+ C D+ GR + +
Sbjct: 319 NIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRTGRQIFDCMPC 378
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
P TS + +LS A+ + RK+
Sbjct: 379 --PSLTSWNAILSGYNQNADHREAVELFRKM 407
>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Cucumis sativus]
Length = 781
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 191/630 (30%), Positives = 342/630 (54%), Gaps = 14/630 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I+SGF ++ N L+ MY K ++ A +F + + +++SW+ ++SGF + E A
Sbjct: 99 VISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFEK---SENA 155
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L++ M ++ + TY A+S C + G ++H + G + + V N L+ M
Sbjct: 156 LSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTM 215
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH-VHGLKIFLLSRKSGVAISEFS 179
Y + L A+ VFD R+ +SW ++++ Y Q G++ + + +F+ + GV
Sbjct: 216 YSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVP 275
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
L C NL++G QIH L K E V LI+ Y+KCE ++ A VF I
Sbjct: 276 ITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELIN 335
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+ +I Y + A+ LF KM G+ P++VTF +L A G
Sbjct: 336 DRNVISWTTMISLYEE-----GAVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLM 390
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H L IK F S V N+++ Y+K E ++++ + F E+ +++SWNALI+G+ +
Sbjct: 391 VHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNAL 450
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISS---DIPAIEWGKQTHCCIVKPGFDSNVVI 416
EA+E + E + PN YT+ ++LN S DI +++ G++ H ++K G + + +I
Sbjct: 451 CQEALEAFLYAIME-YKPNEYTFGSVLNAISAGEDI-SLKHGQRCHSHLIKVGLNVDPII 508
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
AL+DMYAK G + ++++VF+ S ++ +W ++ GYAQHG ++++ M++ +I
Sbjct: 509 SGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEEMEKERI 568
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+ F+ VL+AC +V+ G +FN MI+DH I P +H + +V + G+ A
Sbjct: 569 KPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAE 628
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
E + P P + LL C+TH ++ + A ++ +P ++ ++++SN+YA+
Sbjct: 629 EILARIPGGPGVSALQSLLGACRTHGNVEMAERIANDLMKKEPLESGPYVLMSNLYAQKG 688
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
W++ AKVRK M+E+ + K+ G SW ++ N
Sbjct: 689 DWEKVAKVRKEMRERGVMKEIGFSWVDVGN 718
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 165/551 (29%), Positives = 273/551 (49%), Gaps = 28/551 (5%)
Query: 23 FSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNY--YTYV 80
F LFD+ P N S++ ++ + +L +F+ L+ N +T V
Sbjct: 20 FRSFQHDHNLFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLV 79
Query: 81 GAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
A+ AC G + G++IHG + SG + VSN L+NMY K G L A VF +
Sbjct: 80 LALKACC--GFPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDP 137
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
+ +SW ++LS + + + L L +GV + + L C G Q+H
Sbjct: 138 DIVSWNTILSGFEKSE---NALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLH 194
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG-KA 259
+L KC + D FV L+ +Y++ E L A +VF + D +WSA+I GYAQ G
Sbjct: 195 TLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNG 254
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
+AI +FV+M G+ V + L + G+Q+H L +K G + T V N +
Sbjct: 255 LQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVL 314
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
+ YSKCE++E++ F+ +++ +V+SW +I S + A+ L M +G PN
Sbjct: 315 ISTYSKCEIIEDAKAVFELINDRNVISWTTMI-----SLYEEGAVSLFNKMRLDGVYPND 369
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
T+ +L+ + +E G H +K F S + +G++L+ MYAK + DA +VF
Sbjct: 370 VTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIE 429
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALE--IYSMMQENKIKPNDNTFIGVL---SACVHIG 494
L + ++SWN ++ GYAQ+ L +EALE +Y++M+ KPN+ TF VL SA I
Sbjct: 430 LPYREIISWNALISGYAQNALCQEALEAFLYAIME---YKPNEYTFGSVLNAISAGEDIS 486
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIAS--VVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
L + G + +I+ + +D I S ++ ++A RG + + + + ++ W
Sbjct: 487 L-KHGQRCHSHLIK---VGLNVDPIISGALLDMYAKRGSIQESQRVFNETS-KQSQFAWT 541
Query: 553 CLLSGCKTHKD 563
L+SG H D
Sbjct: 542 ALISGYAQHGD 552
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/542 (32%), Positives = 284/542 (52%), Gaps = 22/542 (4%)
Query: 144 SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF--SCASVLGACAVLGNLKVGMQIHS 201
SW + G+ +H + +FL R S S S + L +CA LG + +H+
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEKL--------------------DLASRVFSNIQLP 241
L + D+F A L+NL K + +VF +
Sbjct: 74 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +W+ LI G A+ + EA+ + +M+ G MP T S VL FA+ + G +H
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
IK GF + FV ++++D Y+ C ++ S+K FD + D V WN+++AG+ +
Sbjct: 194 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVE 253
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA+ + + ML G P T+S+++ ++ + GKQ H +++ F+ N+ I S+L+
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLI 313
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY KCG ++ AR+VF+ + S ++VSW M++GYA HG EA ++ M+ +KPN
Sbjct: 314 DMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHI 373
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL+AC H GLV+ GW YFNSM +G P ++H A++ G AY FI
Sbjct: 374 TFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISE 433
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
I+P VW LL C+ HK+ VL A+KI +P+ +H++LSN+Y+ + W+E
Sbjct: 434 MKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEA 493
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A++RK M+ K +KK+ CSW E++NK+H F + + + +N S + GYV
Sbjct: 494 AQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYV 553
Query: 662 PD 663
P+
Sbjct: 554 PN 555
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 191/394 (48%), Gaps = 22/394 (5%)
Query: 81 GAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM----------------YGKC 124
A+ +CA G +H RSG + +N L+N+ G+
Sbjct: 54 AALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEG 113
Query: 125 GLLSSA----QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
GL S+A + VFD LER+++SW +L+ + H L + + G F+
Sbjct: 114 GLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTL 173
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++VL A ++K GM +H K + D FV LI++YA C ++D + +VF +
Sbjct: 174 STVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSD 233
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W++++ GYAQ G EA+ +F +M +G+ P VTFS ++ AF ++ G+QL
Sbjct: 234 CDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQL 293
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +I+ F+ F++++++D Y KC ++ + + F+ + D+VSW A+I G+
Sbjct: 294 HAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPT 353
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSA 419
EA L + M PN T+ +L S ++ G K + + GF ++ +A
Sbjct: 354 TEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAA 413
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTML 452
L D + G L++A + K S W+T+L
Sbjct: 414 LADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLL 447
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 162/314 (51%), Gaps = 13/314 (4%)
Query: 30 QKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASR 89
+K+FDEM ER+ +SW+ LI G ++ + AL+ R M P+ +T + A
Sbjct: 124 RKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAEC 183
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
D + G +HG ++G + + V + LI+MY C + + VFD+ + +++ W S+L
Sbjct: 184 ADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSML 243
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ Y Q G L IF ++GV + +S++ A L L++G Q+H+ + +
Sbjct: 244 AGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFN 303
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
+ F++ LI++Y KC +D+A RVF+ IQ PD+ +W+A+I GYA G EA LF +M
Sbjct: 304 DNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERM 363
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT--VLDFYSKCE 327
+ P+ +TF VL A + H+ ++ G+ F ++N + C
Sbjct: 364 ELGNVKPNHITFLAVLTACS-----------HAGLVDNGWKYFNSMSNQYGFVPSLEHCA 412
Query: 328 LLEESLKTFDEMDE 341
L ++L ++DE
Sbjct: 413 ALADTLGRAGDLDE 426
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 10/255 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +GF +V + L+ MY ++++ + K+FD + + + W+++++G++Q G E AL
Sbjct: 197 IKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEAL 256
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
FR M+ + P T+ + A + R GK++H + R+ N +S+ LI+MY
Sbjct: 257 GIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMY 316
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A+ VF+ + +SW +++ Y G +F V + +
Sbjct: 317 CKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFL 376
Query: 182 SVLGACAVLGNLKVGMQIHSLV-----FKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+VL AC+ G + G + + + F +LE L + + LD A S
Sbjct: 377 AVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEH----CAALADTLGRAGDLDEAYNFIS 432
Query: 237 NIQL-PDLTAWSALI 250
+++ P + WS L+
Sbjct: 433 EMKIKPTSSVWSTLL 447
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + F+ N+ + L+ MY K ++ A+++F+ + +++SW+A+I G++ G A
Sbjct: 297 LIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEA 356
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
F M ++PN+ T++ ++AC+ G +G + M G + L +
Sbjct: 357 FVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALAD 416
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGL-------KIFLLSRKS 171
G+ G L A F+ + ++ S W +LL + C H + + KIF L KS
Sbjct: 417 TLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRA---CRVHKNTVLAEEVAKKIFELEPKS 473
>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 679
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 198/564 (35%), Positives = 303/564 (53%), Gaps = 24/564 (4%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N L+ Y K S ++D K+FD + ER+++SW++LIS F + E+AL FR M+
Sbjct: 112 SVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFML 171
Query: 69 CCVLEPNYYTYVGAVSACAS---RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
LEP+ +T V V AC++ R GK+IHG +R+G ++ +N L+ MY G
Sbjct: 172 AEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNG-HWSTFTNNALMTMYANLG 230
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L A+F+F +RN ISW +++SS+ Q V L GV + ASVL
Sbjct: 231 RLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLP 290
Query: 186 ACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC+ L L G +IH+ + L + FV L+++Y C ++ RVF I
Sbjct: 291 ACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILERKTG 350
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W+A+I GYAQ +A+ LF++M + +GL P+ T + ++ A A + +H
Sbjct: 351 LWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESIHGY 410
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+IK +V N ++D YS+ +E S FD M+ D+VSWN +I G++ S Y +A
Sbjct: 411 VIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVISGCYNDA 470
Query: 364 IELLKDMLFEGH-----------C--PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
+ +L +M C PN T +L + + A+ GK+ H V+
Sbjct: 471 LLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRNAL 530
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
S V +GSALVDMYAKCG LN +R+VFD + KN+++WN +++ Y HG G EALE++
Sbjct: 531 ASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEALELFKD 590
Query: 471 M-----QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
M ++KP + T I +L+AC H G+V+EG F+ M DHGI P DH A V L
Sbjct: 591 MVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGIEPGPDHYACVADL 650
Query: 526 FACRGQTRRAYEFIKSSPIEPNKV 549
G+ +AY+FI + P + +K+
Sbjct: 651 LGRAGKVEQAYDFINTMPSDFDKL 674
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/545 (26%), Positives = 265/545 (48%), Gaps = 28/545 (5%)
Query: 39 RNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEI 98
R+ SW + ++ + A++ + M+ + P+ Y + + A D GK+I
Sbjct: 40 RSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQI 99
Query: 99 HGRMYRSGLELNS-HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
H + + G E +S ++N L+N YGKC L VFD ER+ +SW SL+S++C+ E
Sbjct: 100 HAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQE 159
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN---LKVGMQIHSLVFKCALEFDKFV 214
L+ F + S F+ S + AC+ L L++G QIH F+ + F
Sbjct: 160 WELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNG-HWSTFT 218
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
L+ +YA +LD A +F + +L +W+ +I ++Q + EA+ M G+
Sbjct: 219 NNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGV 278
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESL 333
P VT + VL A + ++ G+++H+ ++ G +FV + ++D Y C +
Sbjct: 279 KPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGR 338
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML-FEGHCPNLYTYSNILNISSDI 392
+ FD + E WNA+IAG+ + H +A+ L +M+ G CPN T ++I+ S+
Sbjct: 339 RVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARC 398
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+ + H ++K + + + +AL+DMY++ ++ ++ +FD + +++VSWNTM+
Sbjct: 399 ESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMI 458
Query: 453 VGYAQHGLGREALEIYSMMQE-----NK--------IKPNDNTFIGVLSACVHIGLVEEG 499
GY G +AL + MQ NK KPN T + VL C + + +G
Sbjct: 459 TGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKG 518
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+R+ ++ + +++V ++A C +RR ++ + PI+ N + W ++
Sbjct: 519 KEIHAYAVRN-ALASEVTVGSALVDMYAKCGCLNLSRRVFDQM---PIK-NVITWNVIVM 573
Query: 557 GCKTH 561
H
Sbjct: 574 AYGMH 578
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 198/383 (51%), Gaps = 15/383 (3%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H + T N L+ MY R++DA+ LF +RN+ISW+ +IS FSQ AL R
Sbjct: 213 HWSTFTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRY 272
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNCLINMYGKCG 125
MV ++P+ T + AC+ +GKEIH RSG L NS V + L++MY CG
Sbjct: 273 MVLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCG 332
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVL 184
+ S + VFD LER + W ++++ Y Q L +F+ + +G+ + + AS++
Sbjct: 333 QVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIV 392
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A A + IH V K LE D++V L+++Y++ K++++ +F ++++ D+
Sbjct: 393 PASARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIV 452
Query: 245 AWSALIGGYA-------------QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+W+ +I GY ++ A E I+ + P+ +T VL A +
Sbjct: 453 SWNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASL 512
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
G+++H+ ++ +S V + ++D Y+KC L S + FD+M +V++WN ++
Sbjct: 513 AALAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIV 572
Query: 352 AGHLASCHYGEAIELLKDMLFEG 374
+ + EA+EL KDM+ +G
Sbjct: 573 MAYGMHGNGEEALELFKDMVAKG 595
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 200/631 (31%), Positives = 323/631 (51%), Gaps = 39/631 (6%)
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
C T+ + AC ++ D +GK +H ++S + ++++SN +Y KCG L +
Sbjct: 3 CTYPLQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHN 62
Query: 130 AQF-------------------------------VFDASLERNSISWVSLLSSYCQCGEH 158
AQ VFD + + +S+ +L+++Y GE
Sbjct: 63 AQTSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGEC 122
Query: 159 VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
L++F R+ + + F+ + V+ AC ++ + Q+H V C + V +
Sbjct: 123 GPTLRLFEEVRELRLGLDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAV 180
Query: 219 INLYAKCEKLDLASRVFSNIQL---PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
+ Y++ L A RVF + D +W+A+I Q + EA+ LF +M GL
Sbjct: 181 LACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLK 240
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE-LLEESLK 334
T + VL AF VK+ +GGRQ H ++IK GF + V + ++D YSKC + E K
Sbjct: 241 VDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRK 300
Query: 335 TFDEMDEHDVVSWNALIAG-HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
F+E+ D+V WN +I+G L + + ++M G P+ ++ + + S++
Sbjct: 301 VFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLS 360
Query: 394 AIEWGKQTHCCIVKPGFDSN-VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+ GKQ H +K N V + +ALV MY+KCG ++DAR+VFD + N VS N+M+
Sbjct: 361 SPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMI 420
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
GYAQHG+ E+L ++ +M E I PN TFI VLSACVH G VEEG YFN M I
Sbjct: 421 AGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCI 480
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
P +H + ++ L G+ + A I++ P P + W LL C+ H ++ L AA
Sbjct: 481 EPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAAN 540
Query: 573 KILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
+ L +P + + ++MLSN+YA A W+E A V+++M+E+ +KK GCSW E+ K+H F
Sbjct: 541 EFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFV 600
Query: 633 TSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ ++H M ++ + GYVPD
Sbjct: 601 AEDTSHPMIKEIHVYMGKMLKKMKQAGYVPD 631
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 238/465 (51%), Gaps = 18/465 (3%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+PNV +YN L+ Y K S I+ A+++FDE+P+ +++S++ LI+ ++ G L F
Sbjct: 72 YPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEE 131
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
+ L + +T G ++AC D +++H + G + + V+N ++ Y + G
Sbjct: 132 VRELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGF 189
Query: 127 LSSAQFVFDASLE---RNSISWVSLLSSYCQCGEHVHGLKIFLLSR---KSGVAISEFSC 180
LS A+ VF E R+ +SW +++ + CG+H G++ L R + G+ + F+
Sbjct: 190 LSEARRVFREMGEGGGRDEVSWNAMIVA---CGQHREGMEAVGLFREMVRRGLKVDMFTM 246
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR-VFSNIQ 239
ASVL A + +L G Q H ++ K + V GLI+LY+KC + R VF I
Sbjct: 247 ASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEIT 306
Query: 240 LPDLTAWSALIGGYAQLGKACE-AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
PDL W+ +I G++ E + F +M +G P + +F V A +++ G+
Sbjct: 307 APDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGK 366
Query: 299 QLHSLIIKMGFS-SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
Q+H+L IK + V N ++ YSKC + ++ + FD M EH+ VS N++IAG+
Sbjct: 367 QVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQH 426
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF--DSNVV 415
E++ L + ML + PN T+ +L+ +E G Q + ++K F +
Sbjct: 427 GVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEG-QKYFNMMKERFCIEPEAE 485
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
S ++D+ + G+L +A ++ + + + + W T+L +HG
Sbjct: 486 HYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHG 530
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 143/286 (50%), Gaps = 12/286 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFS-RINDAQKLFDEMPERNVISWSALISGFSQI-GMPE 58
MI SGFH N + L+ +Y K + + + +K+F+E+ +++ W+ +ISGFS + E
Sbjct: 269 MIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSE 328
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCL 117
L FR M P+ ++V SAC++ GK++H +S + N V+N L
Sbjct: 329 DGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNAL 388
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+ MY KCG + A+ VFD E N++S S+++ Y Q G V L++F L + +A +
Sbjct: 389 VAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNS 448
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ +VL AC G ++ G + +++ F E + + M I+L + KL A R+
Sbjct: 449 ITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCM--IDLLGRAGKLKEAERI 506
Query: 235 FSNIQL-PDLTAWSALIGGYAQLGK---ACEAIDLFVKMFSSGLMP 276
+ P W+ L+G + G A +A + F+++ P
Sbjct: 507 IETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAP 552
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 208/700 (29%), Positives = 338/700 (48%), Gaps = 71/700 (10%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F N + L+++Y K A +LF + P NV SW+A+I ++ G E AL +
Sbjct: 84 FALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYI 143
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINMYGKC 124
M L P+ + + AC R GK +H + ++ GL+ +V+ L++MYGKC
Sbjct: 144 KMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKC 203
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A VFD ERN ++W S++ +Y Q G + +++F R GV ++ + +
Sbjct: 204 GAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFF 263
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA + G Q H L LE D + ++N Y K ++ A VF N+ + D+
Sbjct: 264 TACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVV 323
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+ ++ GYAQ G +A+++ M GL VT S +L AD ++ + G + H+
Sbjct: 324 TWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYC 383
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLE-------------------------------ESL 333
+K F V++ ++D Y+KC ++ E+L
Sbjct: 384 VKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEAL 443
Query: 334 KTFDEMD----EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS------ 383
K F +M +VVSWN+LI G + EA + +M G PNL T++
Sbjct: 444 KLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSGVMPNLITWTTMMSGL 503
Query: 384 -----------------------NILNISSDIPA------IEWGKQTHCCIVKPGFDSNV 414
N ++I+S + ++ G+ H +++ ++
Sbjct: 504 VQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSI 563
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
I ++++DMYAKCG L+ A+ VF S+K L +N M+ YA HG REAL ++ M++
Sbjct: 564 HIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAREALVLFKQMEKE 623
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
I P+ T VLSAC H GL++EG F M+ + + P +H +V L A GQ
Sbjct: 624 GIVPDHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDE 683
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
A I + P P+ + LL+ C + D+ L Y A+ +L DP+++ ++ LSNVYA
Sbjct: 684 ALRTILTMPSHPDAHILGSLLTACGQNNDIELADYIAKWLLKLDPDNSGNYVALSNVYAA 743
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTS 634
WD+ + +R +MKEK L+K GCSW E+ ++H F S
Sbjct: 744 VGKWDKVSNLRGLMKEKGLRKIPGCSWIEVGQELHVFIAS 783
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 257/525 (48%), Gaps = 10/525 (1%)
Query: 97 EIHGRMYRSG--LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
++H + + G LN V + L+ +Y KCG A +F S N SW +++ + +
Sbjct: 72 QLHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTR 131
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC-ALEFDKF 213
G L ++ ++ G+ F +VL AC VL ++ G +H+ V K L+ +
Sbjct: 132 TGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVY 191
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
VA L+++Y KC ++ A +VF + + W++++ YAQ G EAI +F +M G
Sbjct: 192 VATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQG 251
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ + V S A A+ + GRQ H L + G + +++++FY K L+EE+
Sbjct: 252 VEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAE 311
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
F M DVV+WN ++AG+ +A+E+ M EG + T S +L +++D
Sbjct: 312 VVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTR 371
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+ G + H VK F+ +VV+ S ++DMYAKCGR++ AR+VF + K++V WNTML
Sbjct: 372 DLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLA 431
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
A+ GL EAL+++ MQ + PN ++ ++ G V E + F M G+
Sbjct: 432 ACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSS-GVM 490
Query: 514 PRMDHIASVVHLFACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYA 570
P + +++ G A + ++ I PN + LSGC + L GR
Sbjct: 491 PNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAI 550
Query: 571 AEKILSTDPEDTSAHIMLS--NVYAEANMWDETAKVRKIMKEKSL 613
++ D S HI+ S ++YA+ D V K+ K L
Sbjct: 551 HGYVMRRDLSQ-SIHIITSIMDMYAKCGSLDGAKCVFKMCSTKEL 594
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 201/389 (51%), Gaps = 21/389 (5%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEF--DKFVAMGLINLYAKCEKLDLASRVFSNI 238
++L C L + +Q+H+ V K F + FV L+ LYAKC + A+R+F +
Sbjct: 55 GTLLQGCVYERALPLALQLHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDS 114
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
P++ +W+A+IG + + G EA+ ++KM GL P VL A +K G+
Sbjct: 115 PSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGK 174
Query: 299 QLHSLIIK-MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+H+ ++K +G +VA +++D Y KC +E++ K FDEM E + V+WN+++ + +
Sbjct: 175 GVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQN 234
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EAI + ++M +G L S ++ A+ G+Q H V G + + V+G
Sbjct: 235 GMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLG 294
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
S++++ Y K G + +A VF +++ K++V+WN ++ GYAQ G+ +ALE+ +M+E ++
Sbjct: 295 SSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLR 354
Query: 478 PNDNTFIGVLSACVH-----IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ- 531
+ T +L+ +G+ + N D +S + ++ ++A G+
Sbjct: 355 FDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVS------SGIIDMYAKCGRM 408
Query: 532 --TRRAYEFIKSSPIEPNKVVWRCLLSGC 558
RR + ++ I V+W +L+ C
Sbjct: 409 DCARRVFSCVRKKDI----VLWNTMLAAC 433
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 176/394 (44%), Gaps = 41/394 (10%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G + + + ++ Y K I +A+ +F M ++V++W+ +++G++Q GM E AL
Sbjct: 283 VVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKAL 342
Query: 62 NYFRLMVCCVLEP-----NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
+CCV+ + T ++ A D G + H ++ E + VS+
Sbjct: 343 E-----MCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSG 397
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+I+MY KCG + A+ VF +++ + W ++L++ + G LK+F + V +
Sbjct: 398 IIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPN 457
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
S +SL+F G E ++ + + S
Sbjct: 458 VVSW-------------------NSLIF------------GFFKNGQVAEARNMFAEMCS 486
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ +P+L W+ ++ G Q G A+ +F +M G+ P+ ++ + L +
Sbjct: 487 SGVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKH 546
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
GR +H +++ S + +++D Y+KC L+ + F ++ +NA+I+ + +
Sbjct: 547 GRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYAS 606
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
EA+ L K M EG P+ T +++L+ S
Sbjct: 607 HGQAREALVLFKQMEKEGIVPDHITLTSVLSACS 640
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 157/378 (41%), Gaps = 59/378 (15%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ + F +V+ + ++ MY K R++ A+++F + +++++ W+ +++ ++ G+ AL
Sbjct: 384 VKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEAL 443
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + PN ++ + G + + M SG
Sbjct: 444 KLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSG--------------- 488
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+ N I+W +++S Q G + +F + G+ + S
Sbjct: 489 ----------------VMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSIT 532
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S L C + LK G IH V + L + ++++YAKC LD A VF
Sbjct: 533 SALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTK 592
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+L ++A+I YA G+A EA+ LF +M G++P +T + VL A + H
Sbjct: 593 ELYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACS-----------H 641
Query: 302 SLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
++K G F ++ + ++ + L+E+L+T M H +A
Sbjct: 642 GGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILTMPSHP----DA 697
Query: 350 LIAGH-LASCHYGEAIEL 366
I G L +C IEL
Sbjct: 698 HILGSLLTACGQNNDIEL 715
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 179/542 (33%), Positives = 287/542 (52%), Gaps = 22/542 (4%)
Query: 144 SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF--SCASVLGACAVLGNLKVGMQIHS 201
SW + G+ +H + +FL R S S S + L +CA LG + +H+
Sbjct: 331 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 390
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEK---------------LDLAS-----RVFSNIQLP 241
L + D+F A L+NL K L+ A+ +VF +
Sbjct: 391 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 450
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +W+ LI G A+ + EA+ + +M+ G MP T S VL FA+ + G +H
Sbjct: 451 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 510
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
IK GF + FV ++++D Y+ C ++ S+K FD + D V WN+++AG+ +
Sbjct: 511 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVE 570
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA+ + + ML G P T+S+++ ++ + GKQ H +++ F+ N+ I S+L+
Sbjct: 571 EALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLI 630
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY KCG ++ AR+VF+ + S ++VSW M++GYA HG EA ++ M+ +KPN
Sbjct: 631 DMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHI 690
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ VL+AC H GLV+ GW YFNSM +G P ++H A++ G AY FI
Sbjct: 691 TFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISE 750
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
I+P VW LL C+ HK+ VL A+KI +P+ +H++LSN+Y+ + W+E
Sbjct: 751 MKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEA 810
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A++RK M+ K +KK+ CSW E++NK+H F + + + +N S + GYV
Sbjct: 811 AQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYV 870
Query: 662 PD 663
P+
Sbjct: 871 PN 872
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 191/394 (48%), Gaps = 22/394 (5%)
Query: 81 GAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM----------------YGKC 124
A+ +CA G +H RSG + +N L+N+ G+
Sbjct: 371 AALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEG 430
Query: 125 GLLSSA----QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
GL S+A + VFD LER+++SW +L+ + H L + + G F+
Sbjct: 431 GLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTL 490
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++VL A ++K GM +H K + D FV LI++YA C ++D + +VF +
Sbjct: 491 STVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSD 550
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W++++ GYAQ G EA+ +F +M +G+ P VTFS ++ AF ++ G+QL
Sbjct: 551 CDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQL 610
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +I+ F+ F++++++D Y KC ++ + + F+ + D+VSW A+I G+
Sbjct: 611 HAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPT 670
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSA 419
EA L + M PN T+ +L S ++ G K + + GF ++ +A
Sbjct: 671 TEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAA 730
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTML 452
L D + G L++A + K S W+T+L
Sbjct: 731 LADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLL 764
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 162/314 (51%), Gaps = 13/314 (4%)
Query: 30 QKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASR 89
+K+FDEM ER+ +SW+ LI G ++ + AL+ R M P+ +T + A
Sbjct: 441 RKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAEC 500
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
D + G +HG ++G + + V + LI+MY C + + VFD+ + +++ W S+L
Sbjct: 501 ADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSML 560
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ Y Q G L IF ++GV + +S++ A L L++G Q+H+ + +
Sbjct: 561 AGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFN 620
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
+ F++ LI++Y KC +D+A RVF+ IQ PD+ +W+A+I GYA G EA LF +M
Sbjct: 621 DNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERM 680
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT--VLDFYSKCE 327
+ P+ +TF VL A + H+ ++ G+ F ++N + C
Sbjct: 681 ELGNVKPNHITFLAVLTACS-----------HAGLVDNGWKYFNSMSNQYGFVPSLEHCA 729
Query: 328 LLEESLKTFDEMDE 341
L ++L ++DE
Sbjct: 730 ALADTLGRAGDLDE 743
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 10/255 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +GF +V + L+ MY ++++ + K+FD + + + W+++++G++Q G E AL
Sbjct: 514 IKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEAL 573
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
FR M+ + P T+ + A + R GK++H + R+ N +S+ LI+MY
Sbjct: 574 GIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMY 633
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A+ VF+ + +SW +++ Y G +F V + +
Sbjct: 634 CKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFL 693
Query: 182 SVLGACAVLGNLKVGMQIHSLV-----FKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+VL AC+ G + G + + + F +LE L + + LD A S
Sbjct: 694 AVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEH----CAALADTLGRAGDLDEAYNFIS 749
Query: 237 NIQL-PDLTAWSALI 250
+++ P + WS L+
Sbjct: 750 EMKIKPTSSVWSTLL 764
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + F+ N+ + L+ MY K ++ A+++F+ + +++SW+A+I G++ G A
Sbjct: 614 LIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEA 673
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
F M ++PN+ T++ ++AC+ G +G + M G + L +
Sbjct: 674 FVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALAD 733
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGL-------KIFLLSRKS 171
G+ G L A F+ + ++ S W +LL + C H + + KIF L KS
Sbjct: 734 TLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRA---CRVHKNTVLAEEVAKKIFELEPKS 790
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 189/564 (33%), Positives = 304/564 (53%), Gaps = 33/564 (5%)
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VF E N + W ++L Y + V LK++++ G+ + ++ +L +CA
Sbjct: 22 VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN--------------- 237
+ G QIH V K E D +V LI++YA+ +L+ A +VF
Sbjct: 82 FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141
Query: 238 ----------------IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTF 281
I + D+ +W+A+I GYA+ G EA++LF +M + + P E T
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201
Query: 282 SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
VL A A + GRQ+HS I GF S + N ++D YSKC +E + F+ +
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSC 261
Query: 342 HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
DVVSWN LI G+ Y EA+ L ++ML G PN T +IL + + AI+ G+
Sbjct: 262 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWI 321
Query: 402 HCCIVKPGFD--SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
H I K D + + ++L+DMYAKCG + A +VF+ + K+L SWN M+ G+A HG
Sbjct: 322 HVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHG 381
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
+++S M++N I+P+D TF+G+LSAC H G ++ G H F SM +D+ I+P+++H
Sbjct: 382 RANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHY 441
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP 579
++ L G + A E IK+ P+EP+ V+W LL C+ H +L L A ++ +P
Sbjct: 442 GCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEP 501
Query: 580 EDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQF 639
E+ ++++LSN+YA A WDE AKVR ++ K +KK GCS E+ +++H F
Sbjct: 502 ENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHP 561
Query: 640 QGIDLHEVMNQLSVHLFDGGYVPD 663
+ +++ ++ ++ L + G+VPD
Sbjct: 562 RNREIYGMLEEMEALLEEAGFVPD 585
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 166/296 (56%), Gaps = 2/296 (0%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H +V++Y L+ Y I AQ++FDE+P ++V+SW+A+ISG+++ G + AL F+
Sbjct: 129 HRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKE 188
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ + P+ T V +SACA G+++H + G N + N LI++Y KCG
Sbjct: 189 MMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQ 248
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ +A +F+ ++ +SW +L+ Y + L +F +SG + ++ + S+L A
Sbjct: 249 VETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPA 308
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAM--GLINLYAKCEKLDLASRVFSNIQLPDLT 244
CA LG + +G IH + K + ++ LI++YAKC ++ A +VF+++ L+
Sbjct: 309 CAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLS 368
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+W+A+I G+A G+A DLF +M +G+ P ++TF +L A + + GR +
Sbjct: 369 SWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI 424
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 223/493 (45%), Gaps = 49/493 (9%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A +F + E N + W+ ++ G++ P AL + +M+ L PN YT+ + +CA
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER-------- 140
G++IHG + + G E + +V LI+MY + G L A VFD S R
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 141 -----------------------NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+ +SW +++S Y + G + L++F K+ V E
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ +VL ACA ++++G Q+HS + + + LI+LY+KC +++ A +F
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ D+ +W+ LIGGY + EA+ LF +M SG P++VT +L A A + G
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318
Query: 298 RQLHSLIIK--MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
R +H I K ++ + +++D Y+KC +E + + F+ M + SWNA+I G
Sbjct: 319 RWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 378
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGF 410
+L M G P+ T+ +L+ S ++ G+ T + P
Sbjct: 379 MHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKL 438
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ ++D+ G +A+++ + + V W ++L +HG LE+
Sbjct: 439 EHY----GCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHG----NLELAE 490
Query: 470 MMQEN--KIKPND 480
N K++P +
Sbjct: 491 SFARNLMKVEPEN 503
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 102/197 (51%), Gaps = 2/197 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N+ N L+ +Y K ++ A LF+ + ++V+SW+ LI G++ + + + AL F
Sbjct: 228 GFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLF 287
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS--NCLINMYG 122
+ M+ PN T V + ACA G G+ IH + + ++ + S LI+MY
Sbjct: 288 QEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYA 347
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG + +A VF++ L ++ SW +++ + G G +F RK+G+ + +
Sbjct: 348 KCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVG 407
Query: 183 VLGACAVLGNLKVGMQI 199
+L AC+ G L +G I
Sbjct: 408 LLSACSHSGKLDLGRHI 424
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY K I A ++F+ M +++ SW+A+I GF+ G + F M +EP+
Sbjct: 342 LIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPD 401
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN--CLINMYGKCGLLSSA-QF 132
T+VG +SAC+ G G+ I M + ++ + + C+I++ G GL A +
Sbjct: 402 DITFVGLLSACSHSGKLDLGRHIFKSMTQD-YDITPKLEHYGCMIDLLGHSGLFKEAKEM 460
Query: 133 VFDASLERNSISWVSLLSSYCQCGEH 158
+ +E + + W SLL + C H
Sbjct: 461 IKTMPMEPDGVIWCSLLKA---CRRH 483
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 177/488 (36%), Positives = 283/488 (57%), Gaps = 7/488 (1%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ + ACA NL +IH + E D F+ LI+LY KC + A +VF ++
Sbjct: 56 AFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKK 115
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL---GAFADVKETIGGR 298
D+ +W++LI GYAQ EAI L M P+ TF+ +L GA+AD IGG
Sbjct: 116 DMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYAD--SGIGG- 172
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+L +K + +V + +LD Y++C ++ + FD++D + VSWNALI+G
Sbjct: 173 QIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKG 232
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
A+ + +M G +TYS+I + + I A+E GK H +VK +G+
Sbjct: 233 DGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGN 292
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
++DMYAK G + DARKVF+ + +K+LV+WN+ML +AQ+GLG+EA+ + M+++ I
Sbjct: 293 TMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYL 352
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N TF+ +L+AC H GLV+EG HYF+ MI+++ + P ++H +VV L G A F
Sbjct: 353 NQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVF 411
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I P+EP VW LL+ C+ HK+ +G++AA+ + DP+D+ ++L N+YA W
Sbjct: 412 IFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHW 471
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
D A+VRK+MK +KK+ CSW E+ N +H F + + +++++ +++S+ +
Sbjct: 472 DAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKE 531
Query: 659 GYVPDPIY 666
GYVPD Y
Sbjct: 532 GYVPDMDY 539
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 181/365 (49%), Gaps = 6/365 (1%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L P Y ++ACA + ++IHG + S E ++ + N LI++Y KCG + A
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD +++ +SW SL++ Y Q + + K + F+ AS+L A
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+ +G QIH+L KC D +V L+++YA+C K+D+A+ VF + + +W+ALI
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G+A+ G A+ +F +M +G + T+S + A + G+ +H+ ++K
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKL 286
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---EAIELLK 368
FV NT+LD Y+K + ++ K F+ + D+V+WN+++ A YG EA+ +
Sbjct: 287 TAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLT---AFAQYGLGKEAVSHFE 343
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+M G N T+ IL S ++ GK I + + + +VD+ + G
Sbjct: 344 EMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAG 403
Query: 429 RLNDA 433
LN A
Sbjct: 404 LLNYA 408
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 179/354 (50%), Gaps = 1/354 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +S F + N L+ +Y K + +A K+FD+M +++++SW++LI+G++Q MP A
Sbjct: 77 LASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEA 136
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M+ +PN +T+ + A + D+ G +IH + + +V + L++M
Sbjct: 137 IGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDM 196
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG + A VFD +N +SW +L+S + + G+ L +F +++G + F+
Sbjct: 197 YARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTY 256
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+ A +G L+ G +H+ + K + FV ++++YAK + A +VF +
Sbjct: 257 SSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLN 316
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL W++++ +AQ G EA+ F +M SG+ +++TF +L A + G+
Sbjct: 317 KDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHY 376
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
+I + TV+D + LL +L +M E W AL+A
Sbjct: 377 FDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 149/294 (50%), Gaps = 16/294 (5%)
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
S L P+ + + A A K R++H + F F+ N+++ Y KC +
Sbjct: 44 SGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVV 103
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
E+ K FD+M + D+VSW +LIAG+ + EAI LL ML PN +T++++L +
Sbjct: 104 EAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAG 163
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
G Q H VK + +V +GSAL+DMYA+CG+++ A VFD L SKN VSWN
Sbjct: 164 AYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNA 223
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
++ G+A+ G G AL +++ MQ N + T+ + S IG +E+G + H
Sbjct: 224 LISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQG-----KWVHAH 278
Query: 511 GISPRMDHIA----SVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ R A +++ ++A G R+ +E + + + V W +L+
Sbjct: 279 MVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERV----LNKDLVTWNSMLTA 328
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 188/625 (30%), Positives = 327/625 (52%), Gaps = 12/625 (1%)
Query: 47 LISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG 106
+I+ + G P AL + M + + + V+AC G+ +H + +G
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 107 LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
+ + L+ MY KCG L A+ VF+ ++ +W S++++Y + G + ++
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
GV + + A LG CA + L G IH + + D + L+N+Y KC+
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVL 285
++ A +VF ++ ++ +++A+I Y Q G+ EA++LF +M + P+ TF+ +L
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 286 GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
GA + GR++H + GF + V N ++ Y KC E+ K FD M +V+
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
SW ++IA + + EA+ L K M E P+ ++S+ LN + + A++ G++ H +
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRMDVE---PSGVSFSSALNACALLGALDEGREIHHRV 357
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
V+ S + ++L+ MYA+CG L+DAR+VF+ + +++ S N M+ + QHG ++AL
Sbjct: 358 VEANLASPQ-METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQAL 416
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
IY M++ I + TF+ VL AC H LV + + S++ DHG+ P ++H +V +
Sbjct: 417 RIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDV 476
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
G+ A E +++ P + + V W LLSGCK H DL G AA K+ P +T +
Sbjct: 477 LGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPY 536
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST-SRFAQFQGID- 643
+ LSN+YA A +D+ +VRK M+E+ + + S+ E+ N++H F++ R Q +G D
Sbjct: 537 VFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDG 596
Query: 644 -LHEVMNQLSVHLFD----GGYVPD 663
E + L V L + GYVPD
Sbjct: 597 RTMERVRSLLVELLEPMKQAGYVPD 621
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 245/462 (53%), Gaps = 7/462 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +GF ++ LL MY K ++DA+++F+ M +++ +WS++I+ +++ G E+A
Sbjct: 56 LIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMA 115
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ +R M+ +EPN T+ A+ CAS G+ IH R+ S + + + + L+NM
Sbjct: 116 VVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNM 175
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFS 179
Y KC + A+ VF+ RN S+ +++S+Y Q GEH L++F +S+ + + ++
Sbjct: 176 YLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYT 235
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
A++LGA LGNL+ G ++H + + + V L+ +Y KC A +VF ++
Sbjct: 236 FATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMT 295
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+++I YAQ G EA++LF +M + PS V+FS L A A + GR+
Sbjct: 296 ARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGRE 352
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +++ +S + ++L Y++C L+++ + F+ M D S NA+IA
Sbjct: 353 IHHRVVEANLAS-PQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGR 411
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-THCCIVKPGFDSNVVIGS 418
+A+ + + M EG + T+ ++L S + + ++ G V
Sbjct: 412 KKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYL 471
Query: 419 ALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+VD+ + GRL DA ++ + + + V+W T+L G +HG
Sbjct: 472 CMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHG 513
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 202/648 (31%), Positives = 332/648 (51%), Gaps = 27/648 (4%)
Query: 39 RNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE--------PNYYTYVGAVSACASRG 90
RN +SW+++I FS G E + L++ ++E P+ T V + CA
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESF----LLLGEMMEENGDGAFMPDVATLVTVLPVCARER 56
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
+ GK +HG + L+ ++N L++MY KCG +++AQ +F + +N +SW +++
Sbjct: 57 EIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVG 116
Query: 151 SYCQCGEHVHGLKIFLLSRKSG---VAISEFSCASVLGAC---AVLGNLKVGMQIHSLVF 204
+ G+ HG L +G V E + + + C + L +LK ++H
Sbjct: 117 GFSAEGD-THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLK---ELHCYSL 172
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
K +++ VA + YAKC L A RVF I+ + +W+ALIGG+AQ ++D
Sbjct: 173 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 232
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
++M SGL+P T +L A + +K G+++H II+ FV +VL Y
Sbjct: 233 AHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYI 292
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
C L FD M++ +VSWN +I G+L + A+ + + M+ G +
Sbjct: 293 HCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMP 352
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
+ S +P++ G++ H +K + + I +L+DMYAK G + + KVF+ L K+
Sbjct: 353 VFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKS 412
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
SWN M++GY HGL +EA++++ MQ P+D TF+GVL+AC H GL+ EG Y +
Sbjct: 413 TASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLD 472
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKD 563
M G+ P + H A V+ + GQ +A + E V +W+ LLS C+ H++
Sbjct: 473 QMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQN 532
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
L +G A K+ +PE +++LSN+YA W++ KVR+ M E SL+KD GCSW E
Sbjct: 533 LEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIE 592
Query: 624 LQNKMHYFST-SRFAQ-FQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
L K+ F RF F+ ++ + + L + + GY PD + H
Sbjct: 593 LNRKVFSFVVGERFLDGFE--EIKSLWSILEMKISKMGYRPDTMSVQH 638
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 215/448 (47%), Gaps = 5/448 (1%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVC 69
++ N L+ MY K I +AQ +F +NV+SW+ ++ GFS G + R M+
Sbjct: 77 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 136
Query: 70 C--VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
++ + T + AV C S KE+H + N V+N + Y KCG L
Sbjct: 137 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 196
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
S AQ VF + SW +L+ + Q + L L + SG+ F+ S+L AC
Sbjct: 197 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 256
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ L +L++G ++H + + LE D FV + +++LY C +L +F ++ L +W+
Sbjct: 257 SKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWN 316
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+I GY Q G A+ +F +M G+ ++ V GA + + GR+ H+ +K
Sbjct: 317 TVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKH 376
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
F+A +++D Y+K + +S K F+ + E SWNA+I G+ EAI+L
Sbjct: 377 LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLF 436
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSALVDMYAK 426
++M GH P+ T+ +L + I G + G N+ + ++DM +
Sbjct: 437 EEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGR 496
Query: 427 CGRLNDA-RKVFDHLSSKNLVS-WNTML 452
G+L+ A R V + +S + V W ++L
Sbjct: 497 AGQLDKALRVVAEEMSEEADVGIWKSLL 524
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 190/375 (50%), Gaps = 29/375 (7%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F N + N + Y K ++ AQ++F + + V SW+ALI G +Q P ++L+
Sbjct: 176 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 235
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M L P+ +T +SAC+ R GKE+HG + R+ LE + V ++++Y CG
Sbjct: 236 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 295
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L + Q +FDA +++ +SW ++++ Y Q G L +F G+ + S V G
Sbjct: 296 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 355
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
AC++L +L++G + H+ K LE D F+A LI++YAK + +S+VF+ ++ +
Sbjct: 356 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 415
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+A+I GY G A EAI LF +M +G P ++TF VL A HS +I
Sbjct: 416 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN-----------HSGLI 464
Query: 306 KMGF-------SSFTFVANT-----VLDFYSKCELLEESLKTFDE--MDEHDVVSWNALI 351
G SSF N V+D + L+++L+ E +E DV W +L
Sbjct: 465 HEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSL- 523
Query: 352 AGHLASCHYGEAIEL 366
L+SC + +E+
Sbjct: 524 ---LSSCRIHQNLEM 535
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 126/253 (49%), Gaps = 3/253 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + ++ Y +L +Y+ + Q LFD M +++++SW+ +I+G+ Q G P+ A
Sbjct: 272 IIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRA 331
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR MV ++ + + AC+ R G+E H + LE ++ ++ LI+M
Sbjct: 332 LGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDM 391
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G ++ + VF+ E+++ SW +++ Y G +K+F +++G + +
Sbjct: 392 YAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTF 451
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN-- 237
VL AC G + G++ + + L+ + +I++ + +LD A RV +
Sbjct: 452 LGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEM 511
Query: 238 IQLPDLTAWSALI 250
+ D+ W +L+
Sbjct: 512 SEEADVGIWKSLL 524
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 196/654 (29%), Positives = 345/654 (52%), Gaps = 24/654 (3%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P+++T+N + +++ + A ++F+ MP R+ +S++A+ISG+ + +A + F M
Sbjct: 44 PDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKM 103
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
P + V + R G E H +++ + + N +++ Y + G +
Sbjct: 104 ------PERDLFSWNVMLTGYVRNRRLG-EAH-KLFDLMPKKDVVSWNAMLSGYAQNGFV 155
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A+ VF+ RNSISW LL++Y G ++F +S + ++C ++G
Sbjct: 156 DEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLF--ESQSNWELISWNC--LMGGY 211
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
L Q+ F D +I+ YA+ L A R+F+ + D+ W+
Sbjct: 212 VKRNMLGDARQL----FDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWT 267
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A++ GY Q G EA F +M + +E++++ +L + K+ + +L +
Sbjct: 268 AMVSGYVQNGMVDEARKYFDEM----PVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCR 323
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
SS+ NT++ Y + + ++ K FD M + D VSW A+I+G+ + HY EA+ +
Sbjct: 324 NISSW----NTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMF 379
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+M +G N T+S L+ +DI A+E GKQ H +VK GF++ +G+AL+ MY KC
Sbjct: 380 VEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKC 439
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G ++A VF+ + K++VSWNTM+ GYA+HG GR+AL ++ M++ +KP++ T +GVL
Sbjct: 440 GSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVL 499
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC H GL++ G YF SM RD+ + P H ++ L G+ A +++ P +P
Sbjct: 500 SACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPG 559
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
W LL + H + LG AAE + +P+++ +++LSN+YA + W + K+R
Sbjct: 560 AASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSK 619
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
M+E ++K TG SW E+QNK+H FS + ++ + +L + + GYV
Sbjct: 620 MREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYV 673
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 152/337 (45%), Gaps = 58/337 (17%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF-R 65
H N I++N LL YV R+ +A++LF+ +ISW+ L+ G+ + M A F R
Sbjct: 167 HRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDR 226
Query: 66 LMVCCVLEPNY----YTYVGAVSACAS-----------------RGDARSGKEIHGRMYR 104
+ V V+ N Y VG +S G ++G R Y
Sbjct: 227 MPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYF 286
Query: 105 SGLELNSHVS--------------------------------NCLINMYGKCGLLSSAQF 132
+ + + +S N +I YG+ G ++ A+
Sbjct: 287 DEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARK 346
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA--ISEFSCASVLGACAVL 190
+FD +R+ +SW +++S Y Q G + L +F+ ++ G + S FSCA L CA +
Sbjct: 347 LFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCA--LSTCADI 404
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
L++G Q+H V K E FV L+ +Y KC D A+ VF I+ D+ +W+ +I
Sbjct: 405 AALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMI 464
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
GYA+ G +A+ LF M +G+ P E+T VL A
Sbjct: 465 AGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSA 501
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GF N LL MY K ++A +F+ + E++V+SW+ +I+G+++ G A
Sbjct: 417 VVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQA 476
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F M ++P+ T VG +SAC+ G G E M R ++ S C+I+
Sbjct: 477 LVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMID 536
Query: 120 MYGKCGLLSSAQ-FVFDASLERNSISWVSLLSSYCQCGEHVHG 161
+ G+ G L A+ + + + + SW +LL + +HG
Sbjct: 537 LLGRAGRLEEAENLMRNMPFDPGAASWGALLGA-----SRIHG 574
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 170/499 (34%), Positives = 283/499 (56%), Gaps = 17/499 (3%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK-------------- 227
S+L A +L + K+ +H+ + L+ D ++A LIN YAK
Sbjct: 115 SLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGES 174
Query: 228 -LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVL 285
+D +VF + + D+ +W+ +I G+AQ G EA+D+ +M +G L P T S +L
Sbjct: 175 GIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSIL 234
Query: 286 GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
FA+ + G+++H ++ GF F+ ++++D Y+KC LE SL+ F + D +
Sbjct: 235 PIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAI 294
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
SWN++IAG + + + + + ML E P ++S+++ + + A+ G+Q H CI
Sbjct: 295 SWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCI 354
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
V+ GFD N I S+LVDMYAKCG + AR VFD + +++V+W +++G A HG +A+
Sbjct: 355 VRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAV 414
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
++ M E+ ++P F+ VL+AC H GLV+EGW YFNSM RD GI+P ++H A+V L
Sbjct: 415 SLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADL 474
Query: 526 FACRGQTRRAYEFIKS-SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSA 584
G+ AY+FI + ++P VW LL+ C+ HK + L +K+LS D E+ A
Sbjct: 475 LGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGA 534
Query: 585 HIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDL 644
++++SN+Y+ A W + A++R M++K LKK CSW E+ N++H F + +
Sbjct: 535 YVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKI 594
Query: 645 HEVMNQLSVHLFDGGYVPD 663
++ ++ L + GYV D
Sbjct: 595 NKALDVLLEQMEKEGYVID 613
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 194/410 (47%), Gaps = 30/410 (7%)
Query: 5 GFHPNVITYNHLLLMYVKF---------------SRINDAQKLFDEMPERNVISWSALIS 49
G ++ N L+ Y KF S I+ +K+FD MP R+V+SW+ +I+
Sbjct: 140 GLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIA 199
Query: 50 GFSQIGMPEVALNYFRLM-VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLE 108
GF+Q GM AL+ R M L+P+ +T + A D GKEIHG R+G +
Sbjct: 200 GFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFD 259
Query: 109 LNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLS 168
+ + + LI+MY KC L + F +++ISW S+++ Q GE GL F
Sbjct: 260 GDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRM 319
Query: 169 RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
K V S +SV+ ACA L L +G Q+H + + + ++F+A L+++YAKC +
Sbjct: 320 LKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNI 379
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
+A VF I D+ AW+A+I G A G A +A+ LF M G+ P V F VL A
Sbjct: 380 KMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTAC 439
Query: 289 AD---VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD--EHD 343
+ V E G R +S+ G + V D + LEE+ M +
Sbjct: 440 SHAGLVDE--GWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPT 497
Query: 344 VVSWNALIAGHLASCHYGEAIELLK---DMLFEGHCPNLYTYSNILNISS 390
W+ L LA+C +++EL + D L N+ Y + NI S
Sbjct: 498 GSVWSIL----LAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYS 543
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 211/443 (47%), Gaps = 35/443 (7%)
Query: 43 SWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM 102
+WS++I ++ + ++ + F M + PN + + + A + +H
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 103 YRSGLELNSHVSNCLINMY----------------GKCGLLSSAQFVFDASLERNSISWV 146
R GL+ + +++N LIN Y G+ G + + VFD R+ +SW
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESG-IDCVKKVFDMMPVRDVVSWN 195
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSG-VAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
++++ + Q G +V L + K+G + F+ +S+L A ++ G +IH +
Sbjct: 196 TVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVR 255
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
+ D F+ LI++YAKC +L+ + R F + D +W+++I G Q G+ +
Sbjct: 256 NGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGF 315
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F +M + P V+FS V+ A A + GRQLH I+++GF F+A++++D Y+K
Sbjct: 316 FRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAK 375
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C ++ + FD +D+ D+V+W A+I G H +A+ L ++ML +G P + +
Sbjct: 376 CGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAV 435
Query: 386 LNISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
L S ++ G + + + PG + +A+ D+ + GRL +A +D +
Sbjct: 436 LTACSHAGLVDEGWRYFNSMERDFGIAPGLEHY----AAVADLLGRAGRLEEA---YDFI 488
Query: 441 SSKNLVS-----WNTMLVGYAQH 458
S+ V W+ +L H
Sbjct: 489 SNMRGVQPTGSVWSILLAACRAH 511
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 149/293 (50%), Gaps = 18/293 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF +V + L+ MY K +R+ + + F +P ++ ISW+++I+G Q G + L
Sbjct: 254 VRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGL 313
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+FR M+ ++P ++ + ACA G+++HG + R G + N +++ L++MY
Sbjct: 314 GFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMY 373
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A++VFD +R+ ++W +++ G + + +F + GV +
Sbjct: 374 AKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFM 433
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL------INLYAKCEKLDLASRVF 235
+VL AC+ G + G + + ++E D +A GL +L + +L+ A
Sbjct: 434 AVLTACSHAGLVDEGWR-----YFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFI 488
Query: 236 SNIQ--LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL-MPSEVTFSYVL 285
SN++ P + WS L+ +A ++++L K+ L + SE +YVL
Sbjct: 489 SNMRGVQPTGSVWSILLAAC----RAHKSVELAEKVLDKLLSVDSENMGAYVL 537
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF N + L+ MY K I A+ +FD + +R++++W+A+I G + G A
Sbjct: 354 IVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDA 413
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-----GLELNSHVSN 115
++ F M+ + P Y ++ ++AC+ G G M R GLE + V++
Sbjct: 414 VSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVAD 473
Query: 116 CLINMYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHV 159
L G+ G L A F+ + + + S S+L + C+ + V
Sbjct: 474 LL----GRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSV 514
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 187/597 (31%), Positives = 314/597 (52%), Gaps = 8/597 (1%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSA 130
L P+ +T+ V A S ++H R GL N S L++ Y + G ++ A
Sbjct: 65 LRPDSFTFPPLVRAAPGPA---SAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
VFD ER+ +W ++LS C+ + + GVA + +SVL C VL
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVL 181
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G+ + + +H K L + FV LI++Y K L A VF + L DL W+++I
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
Q GK A++LF M SG+ P +T + A A + +G + +H + + G+
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWD 301
Query: 311 SFTFVA-NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
+A N ++D Y+K ++ + K FD + + DVVSWN LI G++ + EAI + D
Sbjct: 302 VGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYND 361
Query: 370 ML-FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M EG P T+ ++L S + ++ G + H +K G + +V + + L+D+YAKCG
Sbjct: 362 MHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCG 421
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+L +A +F+H+ ++ WN ++ G HG G +AL ++S MQ+ +IKP+ TF+ +L+
Sbjct: 422 KLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLA 481
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H GLV++G +F+ M +GI P H +V + GQ A+EFI+S PI+P+
Sbjct: 482 ACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDS 541
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
VW LL C+ H ++ +G+ A++ + DPE+ ++++SN+YA+ WD VR ++
Sbjct: 542 AVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLV 601
Query: 609 KEKSLKKDTGCSWTELQNKMHYF--STSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ ++L+K G S E++ + F T Q ++ ++ L + GYVPD
Sbjct: 602 RRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPD 658
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 226/463 (48%), Gaps = 14/463 (3%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
HPNV L+ Y++F R+ +A ++FDEMPER+V +W+A++SG + A+
Sbjct: 98 LHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLG 157
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
MV + + T + C GD +H + GL V N LI++YGK G
Sbjct: 158 RMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLG 217
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+L+ A +VF R+ ++W S++S+ Q G+ +++F +SGV + S+
Sbjct: 218 MLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLAS 277
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVA-MGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A A G+ +H V + + +A ++++YAK K+D A +VF N+ D+
Sbjct: 278 AVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVV 337
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+W+ LI GY Q G A EAI ++ M + GL P + TF VL A++ + G ++H+L
Sbjct: 338 SWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHAL 397
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
IK G + +V ++D Y+KC L E++ F+ M WNA+IAG H +A
Sbjct: 398 SIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKA 457
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK------QTHCCIVKPGFDSNVVIG 417
+ L M E P+ T+ ++L S ++ G+ QT IV
Sbjct: 458 LSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHY----- 512
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG 459
+ +VDM + G+L++A + + K + W +L HG
Sbjct: 513 TCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHG 555
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 187/398 (46%), Gaps = 11/398 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G + N L+ +Y K + +A +F M R++++W+++IS Q G A+
Sbjct: 195 VKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAV 254
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS-NCLINM 120
F M+ + P+ T V SA A GD K +H + R G ++ ++ N +++M
Sbjct: 255 ELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDM 314
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFS 179
Y K + +AQ VFD +R+ +SW +L++ Y Q G ++I+ + G+ + +
Sbjct: 315 YAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGT 374
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL A + LG L+ GM++H+L K L D +V LI+LYAKC KL A +F ++
Sbjct: 375 FVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMP 434
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
W+A+I G G +A+ LF +M + P VTF +L A + GR
Sbjct: 435 RRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRS 494
Query: 300 LHSLIIKM-GFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLAS 357
L+ + G ++D + L+E+ + M + D W AL L +
Sbjct: 495 FFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGAL----LGA 550
Query: 358 CHYGEAIELLK---DMLFEGHCPNLYTYSNILNISSDI 392
C +E+ K LFE N+ Y + N+ + I
Sbjct: 551 CRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKI 588
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 195/614 (31%), Positives = 319/614 (51%), Gaps = 36/614 (5%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG--KCGLLSSAQFVFDASLER 140
+S C S R+ K+IH + ++GL + LI + G +S A +F++ E
Sbjct: 36 LSKCQS---IRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
N W S++ L F+ SGV + ++ +L +CA L + G QIH
Sbjct: 93 NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKL-------------------------------D 229
+ V K D F+ LIN+YA+ ++ D
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A ++F + + D+ +W+A+I GYAQ+G++ EA+ LF M + + P+E T VL A A
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
G + S I G S + N ++D YSKC L+ + + FD+M E DV+SWN
Sbjct: 273 QSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNV 332
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I G+ C Y EA+ L ++ML G P T+ +IL + + AI+ GK H I K
Sbjct: 333 MIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNF 392
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ + ++L+D+YAKCG + AR+VFD + K+L SWN M+ G A HG +A E++S
Sbjct: 393 NSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFS 452
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M + I+PN+ TF+G+LSAC H GLV+ G +F+SM++D+ ISP+ H ++ L
Sbjct: 453 KMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRA 512
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
G A +++ ++P+ +W LL C+ H + LG AE++ +P++ A+++LS
Sbjct: 513 GLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLS 572
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMN 649
N+YA A WD+ A++R + ++ +KK GC+ E+ N +H F Q D++ ++
Sbjct: 573 NIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLE 632
Query: 650 QLSVHLFDGGYVPD 663
++ L G+V D
Sbjct: 633 EVDEQLKVFGFVAD 646
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 236/498 (47%), Gaps = 43/498 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRIND---AQKLFDEMPERNVISWSALISGFSQIGMP 57
+I +G H + + L+ + SR D A LF+ + E N+ W+++I G S P
Sbjct: 52 IIKTGLHNTLFALSKLI-EFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSP 110
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
+AL +F M+ +EPN YT+ + +CA A GK+IH + + G + + L
Sbjct: 111 ALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSL 170
Query: 118 INMYGKCGLLSSAQFVFDASLERNSI-------------------------------SWV 146
INMY + G +++AQ VFD S R++I SW
Sbjct: 171 INMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWN 230
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
++++ Y Q G L +F RK+ V +E + SVL ACA L +G + S +
Sbjct: 231 AMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDR 290
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
L + + LI++Y+KC L A +F ++ D+ +W+ +IGGY + EA+ LF
Sbjct: 291 GLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALF 350
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
+M +SG+ P+E+TF +L + A + G+ +H+ I K S T ++ +++D Y+KC
Sbjct: 351 REMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKC 410
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
+ + + FD M + SWNA+I G +A EL M +G PN T+ IL
Sbjct: 411 GNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGIL 470
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA----LVDMYAKCGRLNDARKVFDHLSS 442
+ ++ G+Q +V+ D + S ++D+ + G +A + ++
Sbjct: 471 SACKHAGLVDLGQQFFSSMVQ---DYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEV 527
Query: 443 K-NLVSWNTMLVGYAQHG 459
K + W ++L HG
Sbjct: 528 KPDGAIWGSLLGACRDHG 545
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 201/385 (52%), Gaps = 9/385 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+ I++ L+ Y + ++ A++LFDEMP ++V+SW+A+I+G++Q+G + AL F M
Sbjct: 194 DAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMR 253
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ PN T V +SACA G + + GL N + N LI+MY KCG L
Sbjct: 254 KANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQ 313
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+A+ +FD LER+ ISW ++ Y + L +F SGV +E + S+L +CA
Sbjct: 314 TARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCA 373
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
LG + +G IH+ + K ++ LI+LYAKC + A +VF +++ L +W+A
Sbjct: 374 HLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNA 433
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK-M 307
+I G A G+A +A +LF KM S G+ P+E+TF +L A G+Q S +++
Sbjct: 434 MICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDY 493
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCH-YG--EA 363
S + ++D + L EE+ M+ + D W +L L +C +G E
Sbjct: 494 KISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSL----LGACRDHGRVEL 549
Query: 364 IELLKDMLFEGHCPNLYTYSNILNI 388
EL+ + LFE N Y + NI
Sbjct: 550 GELVAERLFELEPDNPGAYVLLSNI 574
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 134/263 (50%), Gaps = 11/263 (4%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N+ N L+ MY K + A++LFD+M ER+VISW+ +I G++ + + AL F
Sbjct: 291 GLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALF 350
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R M+ +EP T++ + +CA G GK IH + ++ +++ +S LI++Y KC
Sbjct: 351 REMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKC 410
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + +A+ VFD ++ SW +++ G+ ++F G+ +E + +L
Sbjct: 411 GNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGIL 470
Query: 185 GACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL- 240
AC G + +G Q S + +K + + + M I+L + + A + N+++
Sbjct: 471 SACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCM--IDLLGRAGLFEEAESLLQNMEVK 528
Query: 241 PDLTAWSALIG-----GYAQLGK 258
PD W +L+G G +LG+
Sbjct: 529 PDGAIWGSLLGACRDHGRVELGE 551
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA--KCGRLNDARKVFDHLSSK 443
L + S +I KQ H I+K G + + S L++ A + G ++ A +F+ +
Sbjct: 33 LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
NL WN+M+ G + AL + M + ++PN TF +L +C + EG
Sbjct: 93 NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+++ +S H S+++++A G+ A
Sbjct: 153 AHVLKLGFVSDVFIH-TSLINMYAQSGEMNNA 183
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 193/638 (30%), Positives = 323/638 (50%), Gaps = 43/638 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G + N LL MY K + DA +LFD MP N +S++A++ G +Q G + AL
Sbjct: 68 VKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDAL 127
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASR--GD---ARS---GKEIHGRMYRSGLELNSHV 113
F M + + + ACA GD AR+ + IH + R G + HV
Sbjct: 128 RLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHV 187
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
N L+++Y K + A VF++ + +SW L++ Y Q G + +++ ++SG
Sbjct: 188 GNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGF 247
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+E + +++L +C K + A
Sbjct: 248 EPNEVTYSNMLASCI-----------------------------------KARDVPSARA 272
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+F I P +T W+ L+ GY Q E IDLF +M + P T + +L + + +
Sbjct: 273 MFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGN 332
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+Q+HS +++ + FVA+ ++D YSKC + +L F+ M E DVV WN++I+G
Sbjct: 333 FELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISG 392
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
EA + LK M G P +Y++++N+ + + +I G+Q H ++K G+D N
Sbjct: 393 LAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQN 452
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V +G +L+DMYAK G ++DAR F+ + KNLV+WN M+ GYAQ+G G +A+E++ M
Sbjct: 453 VYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLT 512
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
K KP+ TFI VL+ C H GLV+E +FNSM ++GI+P ++H ++ A +
Sbjct: 513 TKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFA 572
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
I P + + ++W LL+ C H + LG ++A+ + DP++ S +++LSN+YA
Sbjct: 573 EVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYA 632
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+ + VR +M + + K G SW ++ F
Sbjct: 633 TLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGSRAF 670
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/571 (26%), Positives = 272/571 (47%), Gaps = 77/571 (13%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG 95
MP+RN +SW+ +I+ ++ G P AL ++ M+ L P +T +SAC + G
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
+ HG + GL+ + V N L+ MY KCG ++ A +FD N +S+ +++ Q
Sbjct: 61 RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQG 120
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACA--------VLGNLKVGMQIHSLVFKCA 207
G L++F ++G+ + + +SVLGACA V +++ IH+LV +
Sbjct: 121 GAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKG 180
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
D+ V L++LYAK K+D A +VF ++ + +W+ LI GY QLG A+++
Sbjct: 181 FGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLE 240
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
M SG P+EVT+S +L + ++ R + I K +++ NT+L Y + E
Sbjct: 241 FMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTW----NTLLSGYGQEE 296
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
L +E++ F M +V P+ T + IL+
Sbjct: 297 LHQETIDLFRRMQHQNVQ-------------------------------PDRTTLAVILS 325
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
S + E GKQ H V+ +++ + S L+D+Y+KCG++ A +F+ ++ +++V
Sbjct: 326 SCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVC 385
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
WN+M+ G A H L EA + M+EN + P ++++ +++ C + + +G ++
Sbjct: 386 WNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVL 445
Query: 508 RD---------------HGISPRMDHIA---------------SVVHLFACRGQTRRA-- 535
+D + S MD ++H +A G +A
Sbjct: 446 KDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVE 505
Query: 536 -YEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
+E++ ++ +P+ V + +L+GC +H LV
Sbjct: 506 LFEYMLTTKQKPDSVTFIAVLTGC-SHSGLV 535
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 192/387 (49%), Gaps = 35/387 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + N L+ +Y K ++++A K+F+ + +++SW+ LI+G+ Q+G E A
Sbjct: 176 VVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERA 235
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M EPN TY +++C D
Sbjct: 236 MEVLEFMQESGFEPNEVTYSNMLASCIKARD----------------------------- 266
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ SA+ +FD + + +W +LLS Y Q H + +F + V +
Sbjct: 267 ------VPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTL 320
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L +C+ LGN ++G Q+HS + L D FVA GLI++Y+KC ++ +A +F+ +
Sbjct: 321 AVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTE 380
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+++I G A + EA D +M +G+ P+E +++ ++ A + GRQ+
Sbjct: 381 RDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQM 440
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++K G+ +V +++D Y+K ++++ F+ M ++V+WN +I G+ +
Sbjct: 441 HAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFG 500
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILN 387
+A+EL + ML P+ T+ +L
Sbjct: 501 EKAVELFEYMLTTKQKPDSVTFIAVLT 527
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 168/345 (48%), Gaps = 24/345 (6%)
Query: 240 LPDLTA--WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+PD A W+ +I A+ G EA++++ M GL P+ T + VL A V G
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
R+ H L +K+G FV N +L Y+KC + ++++ FD M + VS+ A++ G
Sbjct: 61 RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQG 120
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD--------IPAIEWGKQTHCCIVKPG 409
+A+ L M G + S++L + AI+ + H +V+ G
Sbjct: 121 GAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKG 180
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
F S+ +G++LVD+YAK ++++A KVF+ LSS ++VSWN ++ GY Q G A+E+
Sbjct: 181 FGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLE 240
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
MQE+ +PN+ T+ +L++C+ V F+ + + + + L +
Sbjct: 241 FMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPK--------PSVTTWNTLLSGY 292
Query: 530 GQTRRAYEFI------KSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
GQ E I + ++P++ +LS C + LG+
Sbjct: 293 GQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGK 337
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 160/358 (44%), Gaps = 51/358 (14%)
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
M + + VSWN +IA S GEA+E+ + ML EG P +T +++L+ + A++ G
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
++ H VK G D + + + L+ MY KCG + DA ++FD + S N VS+ M+ G AQ
Sbjct: 61 RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQG 120
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSAC-------------------VHIGLVEEG 499
G +AL +++ M I+ + VL AC +H +V +G
Sbjct: 121 GAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKG 180
Query: 500 W----HYFNSMIRDHGISPRMDHIASVVH------------------LFACRGQTRRAYE 537
+ H NS++ + +MD V C + E
Sbjct: 181 FGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLE 240
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
F++ S EPN+V + +L+ C +D+ R +KI P T+ + +LS Y + +
Sbjct: 241 FMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKI--PKPSVTTWNTLLSG-YGQEEL 297
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQ-GIDLHEVMNQLSVH 654
ET + + M+ ++++ D L S SR F+ G +H +L +H
Sbjct: 298 HQETIDLFRRMQHQNVQPDRTTLAVILS------SCSRLGNFELGKQVHSASVRLLLH 349
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 178/560 (31%), Positives = 308/560 (55%), Gaps = 3/560 (0%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+ P Y Y+ C + G GK H R+ R N + NC++ MY C +SA+
Sbjct: 90 INPRSYEYL--FKMCGTLGALSDGKLFHNRLQRMA-NSNKFIDNCILKMYCDCKSFTSAE 146
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
FD ++++ SW +++S+Y + G +++FL G+ + ++++ +
Sbjct: 147 RFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPS 206
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
L +G QIHS + + + + + N+Y KC LD A + + + A + L+
Sbjct: 207 MLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMV 266
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
GY + + +A+ LF KM S G+ FS +L A A + + G+Q+HS IK+G S
Sbjct: 267 GYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLES 326
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V ++DFY KC E + + F+ + E + SW+ALIAG+ S + A+E+ K +
Sbjct: 327 EVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIR 386
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
+G N + Y+NI S + + G Q H +K G + + SA++ MY+KCG+++
Sbjct: 387 SKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVD 446
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
A + F + + V+W ++ +A HG EAL ++ MQ + ++PN TFIG+L+AC
Sbjct: 447 YAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACS 506
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
H GLV+EG +SM ++G++P +DH ++ +++ G + A E I+S P EP+ + W
Sbjct: 507 HSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSW 566
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
+ LL GC +H++L +G AA+ I DP D++ ++++ N+YA A WDE A+ RK+M E+
Sbjct: 567 KSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAER 626
Query: 612 SLKKDTGCSWTELQNKMHYF 631
+L+K+ CSW ++ K+H F
Sbjct: 627 NLRKEVSCSWIIVKGKVHRF 646
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 238/480 (49%), Gaps = 8/480 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+ N N +L MY A++ FD++ ++++ SWS +IS +++ G + A+ F
Sbjct: 123 NSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLR 182
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ + PN + + + GK+IH ++ R G N + + NMY KCG
Sbjct: 183 MLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGW 242
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A+ + +N+++ L+ Y + + L +F GV + F + +L A
Sbjct: 243 LDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKA 302
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA LG+L G QIHS K LE + V L++ Y KC + + A + F +I P+ +W
Sbjct: 303 CAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSW 362
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
SALI GY Q G+ A+++F + S G++ + ++ + A + V + I G Q+H+ IK
Sbjct: 363 SALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIK 422
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G ++ + ++ YSKC ++ + + F +D+ D V+W A+I H EA+ L
Sbjct: 423 KGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRL 482
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYA 425
K+M G PN T+ +LN S ++ GK+ + G + + + ++D+Y+
Sbjct: 483 FKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYS 542
Query: 426 KCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN--KIKPNDNT 482
+ G L +A +V L +++SW ++L G H LEI + +N ++ P D+
Sbjct: 543 RAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSH----RNLEIGMIAADNIFRLDPLDSA 598
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 190/357 (53%), Gaps = 6/357 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF N+ + MYVK ++ A+ ++M +N ++ + L+ G+++ A
Sbjct: 218 LIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDA 277
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ +E + + + + ACA+ GD +GK+IH + GLE V L++
Sbjct: 278 LLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDF 337
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC +A+ F++ E N SW +L++ YCQ G+ L++F R GV ++ F
Sbjct: 338 YVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIY 397
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++ AC+ + +L G QIH+ K L +I++Y+KC ++D A + F I
Sbjct: 398 TNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDK 457
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD---VKETIGG 297
PD AW+A+I +A GKA EA+ LF +M SG+ P+ VTF +L A + VKE G
Sbjct: 458 PDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKE--GK 515
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
+ L S+ + G + N ++D YS+ LL+E+L+ + E DV+SW +L+ G
Sbjct: 516 KILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGG 572
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 201/640 (31%), Positives = 327/640 (51%), Gaps = 18/640 (2%)
Query: 3 TSGFHPNVIT----YNHLL----LMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQI 54
T H +VIT H+L + Y I A+KLFDEMP+ +++S++ +I + +
Sbjct: 34 TKALHCHVITGGRVSGHILSTLSVTYALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRD 93
Query: 55 GMPEVALNYFRLMVC----CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELN 110
G+ A+N F MV CV P+ YTY A G IHGR+ RS ++
Sbjct: 94 GLYHDAINVFIRMVSEGIKCV--PDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMD 151
Query: 111 SHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK 170
+V N L+ MY G + A+ VFD R+ ISW +++S Y + G L +F
Sbjct: 152 KYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN 211
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDL 230
GV + S+L C L L++G +H LV + L V L+N+Y KC ++D
Sbjct: 212 EGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDE 271
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
A VF ++ D+ W+ +I GY + G A++L M G+ P+ VT + ++ A D
Sbjct: 272 ARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGD 331
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ G+ LH I+ S + +++ Y+KC+ ++ + F + W+A+
Sbjct: 332 ALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAI 391
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
IAG + + +A++L K M E PN+ T +++L + + + HC + K GF
Sbjct: 392 IAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGF 451
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLS----SKNLVSWNTMLVGYAQHGLGREALE 466
S++ + LV +Y+KCG L A K+F+ + SK++V W ++ GY HG G AL+
Sbjct: 452 MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQ 511
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
++ M + + PN+ TF L+AC H GLVEEG F+ M+ + R +H +V L
Sbjct: 512 VFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLL 571
Query: 527 ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI 586
G+ AY I + P EP +W LL+ C TH+++ LG AA K+ +PE+T ++
Sbjct: 572 GRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFELEPENTGNYV 631
Query: 587 MLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
+L+N+YA W + KVR +M+ L+K G S E+++
Sbjct: 632 LLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEIRS 671
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 226/466 (48%), Gaps = 10/466 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S F + N LL MY+ F R+ A+ +FD M R+VISW+ +ISG+ + G A
Sbjct: 143 ILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDA 202
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F MV ++P++ T V + C G+ +H + L V N L+NM
Sbjct: 203 LMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNM 262
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A+FVF R+ I+W +++ Y + G+ + L++ L + GV + +
Sbjct: 263 YLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTI 322
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS++ AC L G +H + + D + LI++YAKC+ +DL RVFS
Sbjct: 323 ASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASR 382
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
WSA+I G Q +A+DLF +M + P+ T + +L A+A + + +
Sbjct: 383 NHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNI 442
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE----HDVVSWNALIAGHLA 356
H + K GF S A ++ YSKC LE + K F+ + E DVV W ALI+G+
Sbjct: 443 HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGM 502
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV---KPGFDSN 413
A+++ +M+ G PN T+++ LN S +E G ++ K SN
Sbjct: 503 HGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSN 562
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQH 458
+ +VD+ + GRL++A + + + + W +L H
Sbjct: 563 HY--TCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTH 606
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 193/638 (30%), Positives = 323/638 (50%), Gaps = 43/638 (6%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G + N LL MY K + DA +LFD MP N +S++A++ G +Q G + AL
Sbjct: 169 VKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDAL 228
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASR--GD---ARS---GKEIHGRMYRSGLELNSHV 113
F M + + + ACA GD AR+ + IH + R G + HV
Sbjct: 229 RLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHV 288
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
N L+++Y K + A VF++ + +SW L++ Y Q G + +++ ++SG
Sbjct: 289 GNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGF 348
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+E + +++L +C K + A
Sbjct: 349 EPNEVTYSNMLASCI-----------------------------------KARDVPSARA 373
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+F I P +T W+ L+ GY Q E IDLF +M + P T + +L + + +
Sbjct: 374 MFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGN 433
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+Q+HS +++ + FVA+ ++D YSKC + +L F+ M E DVV WN++I+G
Sbjct: 434 FELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISG 493
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
EA + LK M G P +Y++++N+ + + +I G+Q H ++K G+D N
Sbjct: 494 LAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQN 553
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V +G +L+DMYAK G ++DAR F+ + KNLV+WN M+ GYAQ+G G +A+E++ M
Sbjct: 554 VYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLT 613
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
K KP+ TFI VL+ C H GLV+E +FNSM ++GI+P ++H ++ A +
Sbjct: 614 TKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFA 673
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
I P + + ++W LL+ C H + LG ++A+ + DP++ S +++LSN+YA
Sbjct: 674 EVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYA 733
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+ + VR +M + + K G SW ++ F
Sbjct: 734 TLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGSRAF 771
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 157/600 (26%), Positives = 285/600 (47%), Gaps = 77/600 (12%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
HPNV +YN + + + A+ L MP+RN +SW+ +I+ ++ G P AL ++
Sbjct: 73 HPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQG 132
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ L P +T +SAC + G+ HG + GL+ + V N L+ MY KCG
Sbjct: 133 MLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGS 192
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
++ A +FD N +S+ +++ Q G L++F ++G+ + + +SVLGA
Sbjct: 193 VADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGA 252
Query: 187 CA--------VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
CA V +++ IH+LV + D+ V L++LYAK K+D A +VF ++
Sbjct: 253 CAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESL 312
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ +W+ LI GY QLG A+++ M SG P+EVT+S +L + ++ R
Sbjct: 313 SSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSAR 372
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+ I K +++ NT+L Y + EL +E++ F M +V
Sbjct: 373 AMFDKIPKPSVTTW----NTLLSGYGQEELHQETIDLFRRMQHQNVQ------------- 415
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
P+ T + IL+ S + E GKQ H V+ +++ + S
Sbjct: 416 ------------------PDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVAS 457
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+D+Y+KCG++ A +F+ ++ +++V WN+M+ G A H L EA + M+EN + P
Sbjct: 458 GLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFP 517
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRD---------------HGISPRMDHIA--- 520
++++ +++ C + + +G +++D + S MD
Sbjct: 518 TESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFF 577
Query: 521 ------------SVVHLFACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
++H +A G +A +E++ ++ +P+ V + +L+GC +H LV
Sbjct: 578 NCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGC-SHSGLV 636
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/523 (27%), Positives = 244/523 (46%), Gaps = 84/523 (16%)
Query: 47 LISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG 106
L+ +S G+P AL FR + PN Y+Y A+SA GD + +++ GRM
Sbjct: 51 LVELYSLSGLPCHALRAFRALP----HPNVYSYNAAISAACRAGDLAAARDLLGRMP--- 103
Query: 107 LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
+RN++SW +++++ + G L+++
Sbjct: 104 --------------------------------DRNAVSWNTVIAAVARSGSPGEALEMYQ 131
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
+ G+A + F+ ASVL AC + L G + H L K L+ +FV GL+ +Y KC
Sbjct: 132 GMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCG 191
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
+ A R+F + P+ +++A++GG AQ G +A+ LF +M +G+ V S VLG
Sbjct: 192 SVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLG 251
Query: 287 AFA-------DVKETIG-GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE 338
A A +V I + +H+L+++ GF S V N+++D Y+K ++E++K F+
Sbjct: 252 ACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFES 311
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
+ +VSWN LI G+ Y A+E+L+ M G PN TYSN+L
Sbjct: 312 LSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNML------------ 359
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
CI K + AR +FD + ++ +WNT+L GY Q
Sbjct: 360 ---ASCI--------------------KARDVPSARAMFDKIPKPSVTTWNTLLSGYGQE 396
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
L +E ++++ MQ ++P+ T +LS+C +G E G ++ +R + M
Sbjct: 397 ELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLL-LHNDMFV 455
Query: 519 IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ ++ +++ GQ A I + E + V W ++SG H
Sbjct: 456 ASGLIDIYSKCGQVGIAL-IIFNMMTERDVVCWNSMISGLAIH 497
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 192/387 (49%), Gaps = 35/387 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + N L+ +Y K ++++A K+F+ + +++SW+ LI+G+ Q+G E A
Sbjct: 277 VVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERA 336
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M EPN TY +++C D
Sbjct: 337 MEVLEFMQESGFEPNEVTYSNMLASCIKARD----------------------------- 367
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ SA+ +FD + + +W +LLS Y Q H + +F + V +
Sbjct: 368 ------VPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTL 421
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L +C+ LGN ++G Q+HS + L D FVA GLI++Y+KC ++ +A +F+ +
Sbjct: 422 AVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTE 481
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+++I G A + EA D +M +G+ P+E +++ ++ A + GRQ+
Sbjct: 482 RDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQM 541
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++K G+ +V +++D Y+K ++++ F+ M ++V+WN +I G+ +
Sbjct: 542 HAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFG 601
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILN 387
+A+EL + ML P+ T+ +L
Sbjct: 602 EKAVELFEYMLTTKQKPDSVTFIAVLT 628
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 182/430 (42%), Gaps = 82/430 (19%)
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF--------------------- 336
+ H+ ++ G ++ TF+ N +++ YS L +L+ F
Sbjct: 30 KAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNAAISAACRA 89
Query: 337 ----------DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
M + + VSWN +IA S GEA+E+ + ML EG P +T +++L
Sbjct: 90 GDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVL 149
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+ + A++ G++ H VK G D + + + L+ MY KCG + DA ++FD + S N V
Sbjct: 150 SACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEV 209
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC---------------- 490
S+ M+ G AQ G +AL +++ M I+ + VL AC
Sbjct: 210 SFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQL 269
Query: 491 ---VHIGLVEEGW----HYFNSMIRDHGISPRMDHIASVVH------------------L 525
+H +V +G+ H NS++ + +MD V
Sbjct: 270 AQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQ 329
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
C + EF++ S EPN+V + +L+ C +D+ R +KI P T+ +
Sbjct: 330 LGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKI--PKPSVTTWN 387
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQ-GIDL 644
+LS Y + + ET + + M+ ++++ D L S SR F+ G +
Sbjct: 388 TLLSG-YGQEELHQETIDLFRRMQHQNVQPDRTTLAVILS------SCSRLGNFELGKQV 440
Query: 645 HEVMNQLSVH 654
H +L +H
Sbjct: 441 HSASVRLLLH 450
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 179/560 (31%), Positives = 304/560 (54%), Gaps = 18/560 (3%)
Query: 117 LINMYGKCGLLSSAQFVF-DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
LINMY +C + A VF D ERN ++ ++++ + G G + + R GV
Sbjct: 16 LINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGVMP 75
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+F+ V+ AC ++ +IH +FK LE + FV L+N Y K + + A +VF
Sbjct: 76 DKFTFPCVVRACCEFMEVR---KIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVF 132
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ D+ W+A+I GY ++G +A+ +F +M G+ S T + +L + +
Sbjct: 133 EELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDIN 192
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
GR +H ++ KMG+SS V+N ++D Y KC+ E++L F+ ++E D+ SWN++I+ H
Sbjct: 193 NGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHE 252
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN-- 413
+ + L ML P++ T + +L S + A+ G++ H ++ G N
Sbjct: 253 QCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNEN 312
Query: 414 ---VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
V++ +A++DMYAKCG + +A +FD + +K++ SWN M++GYA HG G EAL+++
Sbjct: 313 GDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHR 372
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M E +IKP+ TF+GVLSAC H G V +G + M + G+ P ++H ++ + G
Sbjct: 373 MCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAG 432
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE--DTSAHIML 588
AY+ + P+E N ++W LL C+ H + LG EKI +P+ + ++I++
Sbjct: 433 HLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKITQLEPKHCGSGSYILM 492
Query: 589 SNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVM 648
S++Y ++E +VR+ MKE+++KK GCSW EL++ ++ FS G H +
Sbjct: 493 SSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIELKDGLYVFS-------MGDRTHHEL 545
Query: 649 NQLSVHLFDGGYVPDPIYSS 668
N L L GY D + S
Sbjct: 546 NALINCLCGFGYFHDEVMHS 565
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 232/469 (49%), Gaps = 15/469 (3%)
Query: 1 MITSGF--HPNVITYNHLLLMYVKFSRINDAQKLF-DEMPERNVISWSALISGFSQIGMP 57
M+TSGF P+ IT L+ MY + +++ +A +F D ERNV +++A+I+GF G+
Sbjct: 1 MVTSGFIHLPSSIT--SLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLA 58
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
+++ M + P+ +T+ V AC + R +IHG +++ GLELN V + L
Sbjct: 59 ADGFQFYKRMRSVGVMPDKFTFPCVVRACCEFMEVR---KIHGCLFKMGLELNVFVGSAL 115
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+N Y K A+ VF+ ER+ + W ++++ Y + G + +F + G+++S
Sbjct: 116 VNTYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSR 175
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
F+ S+L +G++ G IH +V K V+ LI++Y KC+ + A +F
Sbjct: 176 FTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEM 235
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
I DL +W+++I + Q + LF KM S ++P +T + VL A + + + G
Sbjct: 236 INEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHG 295
Query: 298 RQLHSLIIKMGFSSF-----TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
R++H +I G + N ++D Y+KC ++ + FD M DV SWN +I
Sbjct: 296 REIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIM 355
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFD 411
G+ + EA+++ M P++ T+ +L+ S + G+ + ++ G
Sbjct: 356 GYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVI 415
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+ + ++DM + G L +A + + NL+ W +L HG
Sbjct: 416 PTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHG 464
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 176/525 (33%), Positives = 294/525 (56%), Gaps = 38/525 (7%)
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
ERN +SW S+++ Y Q G+ + L+ + +SGV +F+ S++ AC+ LG++ +G Q
Sbjct: 3 ERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQ 62
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H+ V K LI++Y K + A VFS + DL +W ++I G++QLG
Sbjct: 63 LHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGY 122
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
EA+ F +M G P V ++ ++ FA
Sbjct: 123 ELEALCYFKEMLHQG-RPDLVAWNAIIAGFA----------------------------- 152
Query: 319 VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
Y + L +++ F+EM D+VSWNA++ + E LLK M H P
Sbjct: 153 ----YGE---LRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRP 205
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ T +N+L S++ +IE G Q HC +K G + + + + L+D+YAKCG L A K+F
Sbjct: 206 DYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIF 265
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D + + ++VSW+++++GYAQ G G EAL+++ M+ +KPN TF+GVL+AC H+GLVE
Sbjct: 266 DSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVE 325
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
EGW + +M ++ GI+P +H + +V L A G A FI +P+ VVW+ LL+
Sbjct: 326 EGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAA 385
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
CKTH ++ +G+ AAE IL DP +++AH++L N+YA W++ A++R +MK++ ++K
Sbjct: 386 CKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVP 445
Query: 618 GCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
G SW E+++++H F + ++ ++ +L + + D GYVP
Sbjct: 446 GQSWIEVKDRIHVFFVEDSLHPERNKIYTMLEELLLQMLDAGYVP 490
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 205/438 (46%), Gaps = 45/438 (10%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG 95
MPERNV+SW+++I+G+SQ G AL ++ M+ + P+ +T+ + AC+S GD G
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 96 KEIHGRMYRSGLELNSHV--SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
+++H + +S E +H+ N LI+MY K L+ A VF R+ ISW S+++ +
Sbjct: 61 RQLHAHVLKS--EFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFS 118
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
Q G + L F G ++ A++ G ++ F F++
Sbjct: 119 QLGYELEALCYFKEMLHQGR-------PDLVAWNAIIAGFAYGELRDAIFF-----FEEM 166
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
+C DL +W+A++ + +A E L M S
Sbjct: 167 ----------RCN--------------ADLVSWNAILTACMRHDQAEEVFRLLKLMCISQ 202
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
P +T + VLGA A+ G Q+H +K G + T V N ++D Y+KC L+ +
Sbjct: 203 HRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAH 262
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
K FD M DVVSW++LI G+ + EA++L K M PN T+ +L S +
Sbjct: 263 KIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVG 322
Query: 394 AIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTM 451
+E G + + + K G S +VD+ A+ G LN+A ++ ++V W T+
Sbjct: 323 LVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTL 382
Query: 452 LVGYAQHG---LGREALE 466
L HG +G+ A E
Sbjct: 383 LAACKTHGNVDVGKRAAE 400
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 170/361 (47%), Gaps = 50/361 (13%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S F ++I N L+ MY K + I DA +F M R++ISW ++I+GFSQ+G A
Sbjct: 67 VLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEA 126
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L YF+ M+ P+ + ++ A
Sbjct: 127 LCYFKEML-HQGRPDLVAWNAIIAGFA--------------------------------- 152
Query: 121 YGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE-- 177
YG+ L A F F+ + +SW ++L++ C H ++F L + + IS+
Sbjct: 153 YGE---LRDAIFFFEEMRCNADLVSWNAILTA---CMRHDQAEEVFRLLKL--MCISQHR 204
Query: 178 ---FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ +VLGA A ++++G Q+H K L D V GLI+LYAKC L A ++
Sbjct: 205 PDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKI 264
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F ++ PD+ +WS+LI GYAQ G EA+ LF M + P+ VTF VL A + V
Sbjct: 265 FDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLV 324
Query: 295 IGGRQLHSLIIK-MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIA 352
G +L+ + K G + + ++D ++ L E+ +M + D+V W L+A
Sbjct: 325 EEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLA 384
Query: 353 G 353
Sbjct: 385 A 385
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 38/223 (17%)
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
M E +VVSW ++IAG+ + G A+E ML G P+ +T+ +I+ S + I G
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
+Q H ++K F ++++ +AL+ MY K + DA VF +++++L+SW +M+ G++Q
Sbjct: 61 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 120
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
G EAL C YF M+ H P +
Sbjct: 121 GYELEAL------------------------C-----------YFKEML--HQGRPDLVA 143
Query: 519 IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+++ FA G+ R A F + + V W +L+ C H
Sbjct: 144 WNAIIAGFA-YGELRDAIFFFEEMRCNADLVSWNAILTACMRH 185
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 303/550 (55%), Gaps = 2/550 (0%)
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGV 173
N LIN+Y KC +S A+ +FD+ RN +SW +L++ Y Q G + ++F + K +
Sbjct: 61 NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNI 120
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+E+ A+ + +C ++ G Q H K LEF ++V LI LY+KC + A +
Sbjct: 121 FPNEYVIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQ 179
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+ + D+ ++ ++ G Q EA+D+ + S G+ + T+ + A +K+
Sbjct: 180 ILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKD 239
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+Q+H+ ++K ++ ++++D Y KC + FD + +VVSW ++IA
Sbjct: 240 ITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAA 299
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ + + EA+ L M + PN YT + + N ++ + A+ G Q H K G N
Sbjct: 300 YFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGN 359
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V++G+AL+ MY K G + A+ VF +++ N+++WN ++ G++ HGLG+EAL ++ M
Sbjct: 360 VMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMA 419
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+PN TFIGV+ AC H+ LV+EG++YFN +++ I P ++H +V L + G+
Sbjct: 420 TGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLD 479
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A F++S I + V WR LL+ C HK GR AE +L +P D +I+LSN++A
Sbjct: 480 EAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHA 539
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
WD ++RK+M+E+++KK+ G SW E++N H F++ + ++E + L
Sbjct: 540 RVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLS 599
Query: 654 HLFDGGYVPD 663
+ GYVPD
Sbjct: 600 KIRPLGYVPD 609
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 229/454 (50%), Gaps = 28/454 (6%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC-VL 72
N L+ +YVK ++ A+KLFD MP RNV+SWSAL++G+ Q G P F+ MV +
Sbjct: 61 NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNI 120
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA-Q 131
PN Y A+S+C S+ GK+ HG +SGLE + +V N LI +Y KC + +A Q
Sbjct: 121 FPNEYVIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQ 179
Query: 132 FVFDASLERNSISWVSL----LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
++ ++ N I +L L + E V LK+ + G+ + + ++ C
Sbjct: 180 ILY--TVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLII---SEGIEWNNATYVTIFRLC 234
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A L ++ +G Q+H+ + K ++ D ++ +I++Y KC + F +Q ++ +W+
Sbjct: 235 ASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWT 294
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
++I Y Q EA++LF KM + P+E T + + + A + G QLH+ K
Sbjct: 295 SIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKS 354
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---EAI 364
G V N ++ Y K + + F M ++++WNA+I GH H+G EA+
Sbjct: 355 GLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGH---SHHGLGKEAL 411
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-----PGFDSNVVIGSA 419
+ +DM+ G PN T+ ++ + + ++ G ++K PG + I
Sbjct: 412 SMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCI--- 468
Query: 420 LVDMYAKCGRLNDARKVF-DHLSSKNLVSWNTML 452
V + ++ GRL++A H + ++VSW T+L
Sbjct: 469 -VGLLSRSGRLDEAENFMRSHQINWDVVSWRTLL 501
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 187/379 (49%), Gaps = 16/379 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG + N L+ +Y K S + A ++ +P ++ ++ +++G Q A+
Sbjct: 150 LKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAV 209
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ +L++ +E N TYV CAS D GK++H +M +S ++ + ++ + +I+MY
Sbjct: 210 DVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMY 269
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
GKCG + S + FD RN +SW S++++Y Q L +F + +E++ A
Sbjct: 270 GKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMA 329
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ + A L L +G Q+H+ K L+ + V LI +Y K + A VFSN+
Sbjct: 330 VLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCC 389
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+A+I G++ G EA+ +F M ++G P+ VTF V+ A A +K G
Sbjct: 390 NIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYF 449
Query: 302 SLIIKM-----GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH----DVVSWNALIA 352
+ ++K G +T ++ S+ L+E+ + F M H DVVSW L+
Sbjct: 450 NHLMKQFRIVPGLEHYT----CIVGLLSRSGRLDEA-ENF--MRSHQINWDVVSWRTLLN 502
Query: 353 GHLASCHYGEAIELLKDML 371
HY + ++ + +L
Sbjct: 503 ACYVHKHYDKGRKIAEYLL 521
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 6/256 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ S +V + ++ MY K + + FD + RNV+SW+++I+ + Q E A
Sbjct: 250 MLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEA 309
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
LN F M + PN YT ++ A G ++H R +SGL+ N V N LI M
Sbjct: 310 LNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIM 369
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + +AQ VF N I+W ++++ + G L +F +G + +
Sbjct: 370 YFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTF 429
Query: 181 ASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
V+ ACA L + G + + F+ + + ++ L ++ +LD A +
Sbjct: 430 IGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTC--IVGLLSRSGRLDEAENFMRS 487
Query: 238 IQLP-DLTAWSALIGG 252
Q+ D+ +W L+
Sbjct: 488 HQINWDVVSWRTLLNA 503
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 124/280 (44%), Gaps = 48/280 (17%)
Query: 385 ILNISSDIPAIEWGK--QTHCCIVKPGF-DSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
+L +++D +++G+ H I + DS V ++L+++Y KC ++ ARK+FD +
Sbjct: 25 LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVE--- 497
+N+VSW+ ++ GY Q+G E E++ M+ ++ I PN+ +S+C VE
Sbjct: 85 RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVEGKQ 144
Query: 498 -EGWHY-----FNSMIRDHGI---SPRMDHIASVVHLFACRGQTRRAY------------ 536
G+ F+ +++ I S D A++ L+ G Y
Sbjct: 145 CHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTH 204
Query: 537 --------EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIML 588
+ I S IE N + + C + KD+ LG+ ++L +D +
Sbjct: 205 MAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDID-------- 256
Query: 589 SNVYAEANMWDETAKVRKIMKEKS----LKKDTGCSWTEL 624
+VY +++ D K ++ ++ L+ SWT +
Sbjct: 257 CDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSI 296
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 179/587 (30%), Positives = 318/587 (54%), Gaps = 8/587 (1%)
Query: 83 VSACASRGDARSGKEIHGRMY---RSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
+ CA+ R+G+ IHG + +S + + N LIN+Y KCG A+ VFD E
Sbjct: 38 LKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMPE 97
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIF---LLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
RN +SW +++ Y G LK+F + S +S +EF V +C+ G ++ G
Sbjct: 98 RNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDES--RPNEFVATVVFKSCSSSGRIEEG 155
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
Q H K L +FV L+ +Y+ C A RV ++ DL+ +S+ + GY +
Sbjct: 156 KQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
G E ++ +M L+ +T+ L +++++ RQ+HS ++++GF+S +
Sbjct: 216 GAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEAS 275
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
+++ Y KC + + + FD ++V ++ + + EA+ L M +
Sbjct: 276 GAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVP 335
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
PN YT++ LN +++ ++ G H ++K G+ ++V++G+ALV+MYAK G + DARK
Sbjct: 336 PNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKA 395
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
F ++ +++V+WNTM+ G++ HGLGRE LE + M PN TFIGVL AC H+G V
Sbjct: 396 FSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFV 455
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
E+G +YFN +++ + P + H +V L + G + A +F++++PIE + V WR LL+
Sbjct: 456 EQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLN 515
Query: 557 GCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
C ++ LG+ AE + P D+ +++LSN++A++ W+ A+VR +M ++ +KK+
Sbjct: 516 ACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMNKRGVKKE 575
Query: 617 TGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
G SW ++N+ H F + ++ + ++ + GY PD
Sbjct: 576 PGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPD 622
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 146/514 (28%), Positives = 242/514 (47%), Gaps = 19/514 (3%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N L+ +YVK A+K+FD MPERNV+SW A++ G+ G L F+ MV
Sbjct: 68 DVYQINSLINLYVKCGETVRARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMV 127
Query: 69 CC-VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
PN + +C+S G GK+ HG +SGL + V N L+ MY C
Sbjct: 128 FSDESRPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGN 187
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A V D + + S LS Y +CG G ++ K + + + S L C
Sbjct: 188 GEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLC 247
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ L +L + QIHS + + + + +IN+Y KC K+ A RVF N ++ +
Sbjct: 248 SNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNT 307
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
++ Y Q EA++LF KM + + P+E TF+ L + A++ G LH L++K
Sbjct: 308 TIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKS 367
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---EAI 364
G+ + V N +++ Y+K +E++ K F M D+V+WN +I G H+G E +
Sbjct: 368 GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGF---SHHGLGREGL 424
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDM 423
E M+ G PN T+ +L S + +E G ++K ++ + +V +
Sbjct: 425 EAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGL 484
Query: 424 YAKCGRLNDARKVFDHLSSK-NLVSWNTMLVG-YAQHG--LGREALEIYSMMQENKIKPN 479
+K G DA + ++V+W +L Y + LG++ E Y++ + PN
Sbjct: 485 LSKAGMFKDAEDFMRTAPIEWDVVAWRALLNACYVRRNFRLGKKVAE-YAIYK----YPN 539
Query: 480 DNTFIGVLSACVHIGLVE-EGWHYFNSMIRDHGI 512
D+ + VL + +H E EG S++ G+
Sbjct: 540 DSG-VYVLLSNIHAKSREWEGVAEVRSLMNKRGV 572
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 163/352 (46%), Gaps = 2/352 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG + N L+ MY S +A ++ D++P ++ +S+ +SG+ + G +
Sbjct: 163 LKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGA 222
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
R M L + TY+ + C++ D ++IH RM R G S +INMY
Sbjct: 223 EVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMY 282
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
GKCG + AQ VFD + +N + +++ +Y Q L +F V +E++ A
Sbjct: 283 GKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFA 342
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
L + A L LK G +H LV K V L+N+YAK ++ A + FS +
Sbjct: 343 ISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR 402
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG-RQL 300
D+ W+ +I G++ G E ++ F +M +G +P+ +TF VL A + V G
Sbjct: 403 DIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYF 462
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALI 351
+ L+ K ++ SK + +++ E DVV+W AL+
Sbjct: 463 NQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALL 514
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 2/254 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ GF+ V ++ MY K ++ AQ++FD +N++ + ++ + Q E A
Sbjct: 263 MVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEA 322
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
LN F M + PN YT+ ++++ A + G +HG + +SG + V N L+NM
Sbjct: 323 LNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNM 382
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+ F R+ ++W +++ + G GL+ F +G + +
Sbjct: 383 YAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITF 442
Query: 181 ASVLGACAVLGNLKVGM-QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
VL AC+ +G ++ G+ + L+ K ++ D ++ L +K A
Sbjct: 443 IGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAP 502
Query: 240 LP-DLTAWSALIGG 252
+ D+ AW AL+
Sbjct: 503 IEWDVVAWRALLNA 516
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 179/567 (31%), Positives = 303/567 (53%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
K IH R+ R L+ ++++ N ++ G + ++ VF E N W +++
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
+ ++ R G + F+ VL ACA ++++G++IHSL+ K + D FV
Sbjct: 93 DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L++LY KC+ D A +VF +I ++ +W+A+I GY G EAI F K+ GL
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P + VL A A + + G + I G FVA ++LD Y KC LE +
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F M E D+VSW+ +I G+ + +A++L M E P+ YT +L+ + + A+
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
+ G + + F SN V+G+AL+DMY+KCG + A ++F + K+ V WN M+VG
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGL 392
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
+ +G + ++S+++++ I+P++NTFIG+L C H G V EG +FN+M R ++P
Sbjct: 393 SMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPS 452
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL 575
++H +V L G A++ I + P++PN VVW LL GCK HKD L +K++
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512
Query: 576 STDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSR 635
+P ++ ++ LSN+Y+ + W+E K+R MKE+ ++K CSW E+ +H F
Sbjct: 513 ELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGD 572
Query: 636 FAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+ + ++ +++L L G+VP
Sbjct: 573 KSHWLSEKIYAKLDELGRELKAVGHVP 599
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 210/447 (46%), Gaps = 2/447 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N +L + F N ++ +F ++ E N+ W+ +I G + A++ + M
Sbjct: 52 NLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFL 111
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN +T + ACA + D R G +IH + ++G + + V L+++Y KC A V
Sbjct: 112 PNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKV 171
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD ++N +SW ++++ Y G + F + G+ FS VL ACA LG+
Sbjct: 172 FDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDC 231
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
G I + + + FVA L+++Y KC L+ A+ +FS + D+ +WS +I GY
Sbjct: 232 TSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGY 291
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
A G +A+DLF +M S L P T VL A A + G SL+ + F S
Sbjct: 292 AFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNP 351
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ ++D YSKC + ++ + F M + D V WNA++ G + H L +
Sbjct: 352 VLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKH 411
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLND 432
G P+ T+ +L + + G+Q + + ++ +VD+ + G LN+
Sbjct: 412 GIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNE 471
Query: 433 ARKVFDHLSSK-NLVSWNTMLVGYAQH 458
A ++ +++ K N V W +L G H
Sbjct: 472 AHQLINNMPMKPNAVVWGALLGGCKLH 498
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 189/376 (50%), Gaps = 11/376 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ +V LL +YVK +DA K+FD++P++NV+SW+A+I+G+ G A
Sbjct: 140 LVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREA 199
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F+ ++ L+P+ ++ V ++ACA GD SG+ I + SG+ N V+ L++M
Sbjct: 200 IGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDM 259
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L A +F A E++ +SW +++ Y G L +F + + ++
Sbjct: 260 YVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTM 319
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
VL ACA LG L +G+ SL+ + + + LI++Y+KC + A +F+ ++
Sbjct: 320 VGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKK 379
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+A++ G + G A LF + G+ P E TF +L GRQ
Sbjct: 380 KDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQF 439
Query: 301 HSLIIKMGFSSFTFVAN--TVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG---- 353
+ +K FS + + ++D + LL E+ + + M + + V W AL+ G
Sbjct: 440 FN-NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH 498
Query: 354 ---HLASCHYGEAIEL 366
HLA + IEL
Sbjct: 499 KDTHLAEQVLKKLIEL 514
>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
Length = 686
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 195/628 (31%), Positives = 337/628 (53%), Gaps = 18/628 (2%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
T GF V N ++ MY K R ++A +F+ + + +V+SW+ ++SGF ++ALN
Sbjct: 29 TCGFTSFVCVSNAVMGMYRKAGRFDNALYIFENLVDPDVVSWNTILSGFDD---NQIALN 85
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+ M + + +TY A+S C R G ++ + +SGLE + V N I MY
Sbjct: 86 FVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSGLESDLVVGNSFITMYS 145
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR---KSGVAISEFS 179
+ G A+ VFD ++ ISW SLLS Q E G + L+ R + GV + S
Sbjct: 146 RSGSFRGARRVFDEMPFKDMISWNSLLSGLSQ--EGTFGFEAVLIFRDMMREGVELDHVS 203
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV+ C +LK+ QIH L K E V L++ Y+KC L+ VF +
Sbjct: 204 FTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFYQMS 263
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+ +I +A+ +F+ M G+ P+EVTF +L A ++ G +
Sbjct: 264 ERNVVSWTTMISSNRD-----DAVSIFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGLK 318
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H L IK GF S V N+ + Y+K E LE++ K FD++ +++SWNA+I+G +
Sbjct: 319 IHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDITFREIISWNAMISGFAQNGF 378
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILN---ISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
EA+++ E PN YT+ ++LN + DI +++ G++ H ++K G +S V+
Sbjct: 379 SHEALKMFLSATAE-TMPNEYTFGSVLNAIAFAEDI-SVKHGQRCHAHLLKLGLNSCPVV 436
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
SAL+DMYAK G +N++ KVF+ +S +N W +++ Y+ HG + ++ M + +
Sbjct: 437 SSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSIISAYSSHGDFNSVMNLFHEMIKENV 496
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
P+ TF+ VL+AC G+V++G N MI D+ + P +H + +V + G+ + A
Sbjct: 497 APDLVTFLSVLTACNRKGMVDKGHEILNMMIEDYNLEPSHEHYSCMVDMLGRAGRLKEAE 556
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
E + P P + + + +L C+ H ++ +G AE + PE + +++ + N+YAE
Sbjct: 557 ELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKE 616
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTEL 624
WD+ A++RK M++K++ K+ G SW ++
Sbjct: 617 QWDKAAEIRKAMRKKNVSKEAGFSWIDV 644
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 243/488 (49%), Gaps = 20/488 (4%)
Query: 82 AVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERN 141
A+ AC RGD + G +IHG G VSN ++ MY K G +A ++F+ ++ +
Sbjct: 9 ALKAC--RGDLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIFENLVDPD 66
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS 201
+SW ++LS + ++ L + + +GV F+ ++ L C ++G+Q+ S
Sbjct: 67 VVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQS 123
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK-AC 260
V K LE D V I +Y++ A RVF + D+ +W++L+ G +Q G
Sbjct: 124 TVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGF 183
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
EA+ +F M G+ V+F+ V+ + RQ+H L IK G+ S V N ++
Sbjct: 184 EAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 243
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
YSKC +LE F +M E +VVSW +I S + +A+ + +M +G PN
Sbjct: 244 SRYSKCGVLEAVKSVFYQMSERNVVSWTTMI-----SSNRDDAVSIFLNMRLDGVYPNEV 298
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T+ +LN I+ G + H +K GF S +G++ + MYAK L DA+K FD +
Sbjct: 299 TFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDI 358
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+ + ++SWN M+ G+AQ+G EAL+++ + + PN+ TF VL+A I E+
Sbjct: 359 TFREIISWNAMISGFAQNGFSHEALKMF-LSATAETMPNEYTFGSVLNA---IAFAEDIS 414
Query: 501 HYFNSMIRDHGISPRMDHI----ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
H + ++ ++++ ++A RG + E + + + N+ VW ++S
Sbjct: 415 VKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINES-EKVFNEMSQRNQFVWTSIIS 473
Query: 557 GCKTHKDL 564
+H D
Sbjct: 474 AYSSHGDF 481
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 236/447 (52%), Gaps = 16/447 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV- 59
++ SG +++ N + MY + A+++FDEMP +++ISW++L+SG SQ G
Sbjct: 125 VVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGFE 184
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
A+ FR M+ +E ++ ++ ++ C D + ++IHG + G E V N L++
Sbjct: 185 AVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 244
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG+L + + VF ERN +SW +++SS + IFL R GV +E +
Sbjct: 245 RYSKCGVLEAVKSVFYQMSERNVVSWTTMISS-----NRDDAVSIFLNMRLDGVYPNEVT 299
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+L A +K G++IH L K + V I +YAK E L+ A + F +I
Sbjct: 300 FVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDIT 359
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG--AFADVKETIGG 297
++ +W+A+I G+AQ G + EA+ +F+ ++ MP+E TF VL AFA+ G
Sbjct: 360 FREIISWNAMISGFAQNGFSHEALKMFLSA-TAETMPNEYTFGSVLNAIAFAEDISVKHG 418
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
++ H+ ++K+G +S V++ +LD Y+K + ES K F+EM + + W ++I+ + +
Sbjct: 419 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSIISAYSSH 478
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+ + L +M+ E P+L T+ ++L + ++ G + +++ D N+
Sbjct: 479 GDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGHEILNMMIE---DYNLEPS 535
Query: 418 ----SALVDMYAKCGRLNDARKVFDHL 440
S +VDM + GRL +A ++ +
Sbjct: 536 HEHYSCMVDMLGRAGRLKEAEELMSEV 562
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 8/217 (3%)
Query: 278 EVTFSYVLGA-FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
EVT L A D+K G Q+H GF+SF V+N V+ Y K + +L F
Sbjct: 3 EVTLCLALKACRGDLKR---GCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIF 59
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
+ + + DVVSWN +++G + A+ + M G + +TYS L+
Sbjct: 60 ENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFR 116
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G Q +VK G +S++V+G++ + MY++ G AR+VFD + K+++SWN++L G +
Sbjct: 117 LGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLS 176
Query: 457 QHG-LGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
Q G G EA+ I+ M ++ + +F V++ C H
Sbjct: 177 QEGTFGFEAVLIFRDMMREGVELDHVSFTSVITTCCH 213
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 192/592 (32%), Positives = 310/592 (52%), Gaps = 11/592 (1%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSH----------VSNCLINMYGKCGLLSSAQF 132
+S C G G +H + ++ L+ + V N L++MY +CG L A
Sbjct: 51 LSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGELRDATK 110
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV-AISEFSCASVLGACAVLG 191
VFD +++ISW S +S G+ G ++F +SG+ + + +VL AC
Sbjct: 111 VFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPE 170
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
V IHSLVF E + V LI Y +C RVF + ++ W+A+I
Sbjct: 171 FCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVIS 230
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G +Q E++ LF KM + P+ +T+ L A + ++ GRQ+H L+ K+G
Sbjct: 231 GLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHF 290
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
+ + ++D YSKC LE++ K F+ +E D VS ++ G + E+I++ M+
Sbjct: 291 DLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMV 350
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
G + S IL + ++ GKQ H I+K F SN + + L++MY+KCG L+
Sbjct: 351 KNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLD 410
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
D+ K+F + +N VSWN+M+ +A+HG G AL++Y M+ + P D TF+ +L AC
Sbjct: 411 DSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACA 470
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
H+GLVE+G + SM +D+GI PRM+H A VV + G A +FI+ P +P +VW
Sbjct: 471 HVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVW 530
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
+ LL C H + +G+YAA ++ PE + +I+L+N+Y+ W E A+ K MK+
Sbjct: 531 QALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGKWKERARTIKKMKDM 590
Query: 612 SLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ K+TG SW E++ ++H F ++ V+ +L + D GYVPD
Sbjct: 591 GVTKETGISWIEIEKQIHSFVVEDRMHPHAEIIYGVLGELFKLMMDEGYVPD 642
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 235/453 (51%), Gaps = 3/453 (0%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR-LMV 68
++ +N LL MY + + DA K+FD MP ++ ISW++ ISG G E+ F+ L
Sbjct: 89 IVVWNSLLSMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYE 148
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ + + T ++AC K IH ++ G E V N LI Y +CG S
Sbjct: 149 SGIYQFDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCS 208
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
S + VFD E+N ++W +++S Q + LK+F R V + + S L AC+
Sbjct: 209 SGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACS 268
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L ++ G QIH LV+K + FD + L+++Y+KC L+ A ++F + + D + +
Sbjct: 269 GLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTV 328
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
++ G AQ G E+I +FVKM +G++ S +LG F G+Q+HSLIIK
Sbjct: 329 ILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKS 388
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
F S FV N +++ YSKC L++S+K F M + + VSWN++IA + A++L +
Sbjct: 389 FGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYE 448
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKC 427
+M EG P T+ ++L+ + + +E G + K G + + +VDM +
Sbjct: 449 EMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRA 508
Query: 428 GRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG 459
G LN+A+K + L K ++ W +L + HG
Sbjct: 509 GLLNEAKKFIERLPEKPGILVWQALLGACSIHG 541
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 186/350 (53%), Gaps = 2/350 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G+ + N L+ Y + + +++FDEM E+NV++W+A+ISG SQ E +L F
Sbjct: 186 GYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLF 245
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M ++PN TY+ ++ AC+ R G++IHG +++ G+ + + + L++MY KC
Sbjct: 246 GKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKC 305
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L A +F+++ E + +S +L Q G +++F+ K+GV I +++L
Sbjct: 306 GSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAIL 365
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
G + +L +G QIHSL+ K + + FV GLIN+Y+KC LD + ++F + +
Sbjct: 366 GVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSV 425
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-LHSL 303
+W+++I +A+ G A+ L+ +M G+ P++VTF +L A A V G L S+
Sbjct: 426 SWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESM 485
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHD-VVSWNALIA 352
G V+D + LL E+ K + + E ++ W AL+
Sbjct: 486 AKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLG 535
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I F N N L+ MY K ++D+ K+F MP+RN +SW+++I+ F++ G A
Sbjct: 384 IIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRA 443
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGK---EIHGRMYRSGLELNSHVSNCL 117
L + M + P T++ + ACA G G E + Y G + + C+
Sbjct: 444 LQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYA--CV 501
Query: 118 INMYGKCGLLSSAQFVFDASLERNSI-SWVSLLSS 151
++M G+ GLL+ A+ + E+ I W +LL +
Sbjct: 502 VDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGA 536
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 179/567 (31%), Positives = 303/567 (53%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
K IH R+ R L+ ++++ N ++ G + ++ VF E N W +++
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
+ ++ R G + F+ VL ACA ++++G++IHSL+ K + D FV
Sbjct: 93 DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L++LY KC+ D A +VF +I ++ +W+A+I GY G EAI F K+ GL
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P + VL A A + + G + I G FVA ++LD Y KC LE +
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F M E D+VSW+ +I G+ + +A++L M E P+ YT +L+ + + A+
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
+ G + + F SN V+G+AL+DMY+KCG + A ++F + K+ V WN M+VG
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGL 392
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
+ +G + ++S+++++ I+P++NTFIG+L C H G V EG +FN+M R ++P
Sbjct: 393 SMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPS 452
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL 575
++H +V L G A++ I + P++PN VVW LL GCK HKD L +K++
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512
Query: 576 STDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSR 635
+P ++ ++ LSN+Y+ + W+E K+R MKE+ ++K CSW E+ +H F
Sbjct: 513 ELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGD 572
Query: 636 FAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+ + ++ +++L L G+VP
Sbjct: 573 KSHWLSEKIYAKLDELGRELKAVGHVP 599
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 209/447 (46%), Gaps = 2/447 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N +L + F N ++ +F ++ E N+ W+ +I G + A++ + M
Sbjct: 52 NLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFL 111
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN +T + ACA + D R G +IH + ++G + + V L+++Y KC A V
Sbjct: 112 PNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKV 171
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD ++N +SW ++++ Y G + F + G+ FS VL ACA LG+
Sbjct: 172 FDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDC 231
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
G I + + + FVA L+++Y KC L+ A+ +FS + D+ +WS +I GY
Sbjct: 232 TSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGY 291
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
A G +A+DLF +M S L P T VL A A + G SL+ + F S
Sbjct: 292 AFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNP 351
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+ ++D YSKC + ++ + F M D V WNA++ G + H L +
Sbjct: 352 VLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKH 411
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLND 432
G P+ T+ +L + + G+Q + + ++ +VD+ + G LN+
Sbjct: 412 GIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNE 471
Query: 433 ARKVFDHLSSK-NLVSWNTMLVGYAQH 458
A ++ +++ K N V W +L G H
Sbjct: 472 AHQLINNMPMKPNAVVWGALLGGCKLH 498
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 189/376 (50%), Gaps = 11/376 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G+ +V LL +YVK +DA K+FD++P++NV+SW+A+I+G+ G A
Sbjct: 140 LVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREA 199
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F+ ++ L+P+ ++ V ++ACA GD SG+ I + SG+ N V+ L++M
Sbjct: 200 IGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDM 259
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L A +F A E++ +SW +++ Y G L +F + + ++
Sbjct: 260 YVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTM 319
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
VL ACA LG L +G+ SL+ + + + LI++Y+KC + A +F+ ++
Sbjct: 320 VGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKR 379
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+A++ G + G A LF + G+ P E TF +L GRQ
Sbjct: 380 KDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQF 439
Query: 301 HSLIIKMGFSSFTFVAN--TVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG---- 353
+ +K FS + + ++D + LL E+ + + M + + V W AL+ G
Sbjct: 440 FN-NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH 498
Query: 354 ---HLASCHYGEAIEL 366
HLA + IEL
Sbjct: 499 KDTHLAEQVLKKLIEL 514
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 191/641 (29%), Positives = 328/641 (51%), Gaps = 64/641 (9%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
C +R ++ K++H + +S + + N LIN Y K G ++ A+ VFD + NS SW
Sbjct: 16 CETRNQTQA-KKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 146 VSLLSSYCQCGEHVHGLKIF-LLSRKSGVA----ISEFSC-------------------- 180
++LS+Y + G+ +IF ++ + GV+ IS + C
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 181 -------ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+++L + G + +G QIH + K FV L+++YAK + +AS+
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194
Query: 234 VFSNIQ-------------------------------LPDLTAWSALIGGYAQLGKACEA 262
VF +Q D +W+ +I G Q G EA
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254
Query: 263 IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
+DLF M G+ + TF VL A ++ G+++H+LII+ G++ FV + ++D
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDM 314
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
Y KC + + F M +VVSW A++ G+ + EA+ + DM G P+ +T
Sbjct: 315 YCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTL 374
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
++++ +++ ++E G Q HC + G S + + +AL+ +Y KCG + D+ ++FD +S
Sbjct: 375 GSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSF 434
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
++ VSW ++ GYAQ G E ++++ M +KP+ TFI VLSAC GLVE G Y
Sbjct: 435 RDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQY 494
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
F SM++DHGI P DH ++ LF G+ A FI P P+ + W LLS C+ +
Sbjct: 495 FESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYG 554
Query: 563 DLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWT 622
+ +G++AAE +L DP++ + +I+LS++YA W A++R+ M+EK +K+ G SW
Sbjct: 555 NEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWI 614
Query: 623 ELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ ++K++ FS + ++ + +L+ + + GYVPD
Sbjct: 615 KYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPD 655
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 248/500 (49%), Gaps = 43/500 (8%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG-MPEVALNYFR 65
PN ++N +L Y K ++ Q++F MP R+ +SW++LISG+ G + E Y
Sbjct: 68 QPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNS 127
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
+M VL N T+ + +S+G G++IHG++ + G V + L++MY K G
Sbjct: 128 MMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMG 187
Query: 126 LLSSAQFVFDASLERN-------------------------------SISWVSLLSSYCQ 154
L+S A VFD ERN SISW ++++ Q
Sbjct: 188 LVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQ 247
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
G + +F R+ G+A+ +++ SVL AC L LK G +IH+L+ + + FV
Sbjct: 248 NGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFV 307
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
L+++Y KC + A VF + ++ +W+A++ GY Q G + EA+ +F M +G+
Sbjct: 308 GSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGI 367
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
P + T V+ + A++ G Q H + G SF V+N ++ Y KC +E+S +
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQ 427
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
FDEM D VSW AL++G+ E I+L + ML +G P+ T+ +L+ S
Sbjct: 428 LFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGL 487
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGS----ALVDMYAKCGRLNDARKVFDHLS-SKNLVSWN 449
+E G+Q ++K D ++ S ++D++ + GRL +A+ + + S + + W
Sbjct: 488 VERGQQYFESMLK---DHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWA 544
Query: 450 TMLVG---YAQHGLGREALE 466
T+L Y +G+ A E
Sbjct: 545 TLLSSCRLYGNEEIGKWAAE 564
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 133/267 (49%), Gaps = 11/267 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG++ NV + L+ MY K + A+ +F M +NV+SW+A++ G+ Q G E A
Sbjct: 296 IIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEA 355
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M +EP+ +T +S+CA+ G + H + SGL VSN LI +
Sbjct: 356 VRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITL 415
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG + + +FD R+ +SW +L+S Y Q G+ + +F G+ +
Sbjct: 416 YGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTF 475
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFK--CALEF-DKFVAMGLINLYAKCEKLDLASRVFSN 237
+VL AC+ G ++ G Q + K + F D + M I+L+ + +L+ A +
Sbjct: 476 IAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCM--IDLFGRAGRLEEAKNFINK 533
Query: 238 IQL-PDLTAWSALIG-----GYAQLGK 258
+ PD W+ L+ G ++GK
Sbjct: 534 MPFSPDSIGWATLLSSCRLYGNEEIGK 560
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 183/589 (31%), Positives = 314/589 (53%), Gaps = 12/589 (2%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
V+AC G+ +H + +G + + L+ MY KCG L A+ VF+ ++
Sbjct: 17 VAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDL 76
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
+W S++S+Y + G + ++ GV + + A LG CA + L G IH
Sbjct: 77 FAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQR 136
Query: 203 VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEA 262
+ + D + L+N+Y KC+++ A +VF ++ ++ +++A+I Y Q G+ EA
Sbjct: 137 ILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEA 196
Query: 263 IDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
++LF +M + P+ TF+ +LGA + GR++H + GF + V N ++
Sbjct: 197 LELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVT 256
Query: 322 FYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYT 381
Y KC E+ K FD M +V+SW ++IA + + EA+ L K M E P+ +
Sbjct: 257 MYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDVE---PSGVS 313
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
+S+ LN + + A++ G++ H +V+ S + ++L+ MYA+CG L+DAR+VF+ +
Sbjct: 314 FSSALNACALLGALDEGREIHHRVVEAHLASPQ-METSLLSMYARCGSLDDARRVFNRMK 372
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
+++ S N M+ + QHG ++AL IY M++ I + TF+ VL AC H LV +
Sbjct: 373 TRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRD 432
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+F S++ DHG+ P ++H +V + G+ A E +++ P + + V W LLSGCK H
Sbjct: 433 FFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRH 492
Query: 562 KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSW 621
DL G AA K+ P +T ++ LSN+YA A +D+ +VRK M+E+ + S+
Sbjct: 493 GDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTTPVAVSY 552
Query: 622 TELQNKMHYFST-SRFAQFQGID--LHEVMNQLSVHLFD----GGYVPD 663
E+ N++H F++ R Q +G D E + L + L + GYVPD
Sbjct: 553 IEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQAGYVPD 601
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 212/376 (56%), Gaps = 9/376 (2%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
+ G+ +F S++ AC L L+ G ++H + D + L+ +YAKC LD
Sbjct: 3 ERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLD 62
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A RVF +++ DL AWS++I YA+ G+ A+ L+ +M + G+ P+ VTF+ LG A
Sbjct: 63 DAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCA 122
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
V GR +H I+ + +++L+ Y KC+ + E+ K F+ M +V S+ A
Sbjct: 123 SVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTA 182
Query: 350 LIAGHLASCHYGEAIELLKDM-LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
+I+ ++ + + EA+EL M E PN YT++ IL + +E G++ H +
Sbjct: 183 MISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASR 242
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
GFD+NVV+ +ALV MY KCG +ARKVFD ++++N++SW +M+ YAQHG +EAL ++
Sbjct: 243 GFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLF 302
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
M ++P+ +F L+AC +G ++EG + ++ H SP+M+ S++ ++A
Sbjct: 303 KRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSMYAR 357
Query: 529 RG---QTRRAYEFIKS 541
G RR + +K+
Sbjct: 358 CGSLDDARRVFNRMKT 373
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 246/465 (52%), Gaps = 13/465 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +GF ++ LL MY K ++DA+++F+ M +++ +WS++IS +++ G E+A
Sbjct: 36 LIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMA 95
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ +R M+ +EPN T+ A+ CAS G+ IH R+ S + + + + L+NM
Sbjct: 96 VVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNM 155
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFS 179
Y KC + A+ VF+ RN S+ +++S+Y Q GEH L++F +S+ + + ++
Sbjct: 156 YLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYT 215
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
A++LGA LGNL+ G ++H + + + V L+ +Y KC A +VF ++
Sbjct: 216 FATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMT 275
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+++I YAQ G EA++LF +M + PS V+FS L A A + GR+
Sbjct: 276 ARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGRE 332
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +++ +S + ++L Y++C L+++ + F+ M D S NA+IA
Sbjct: 333 IHHRVVEAHLAS-PQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGR 391
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A+ + + M EG + T+ ++L S + + +V D VV
Sbjct: 392 KKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLV---MDHGVVPLVE 448
Query: 420 ----LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+VD+ + GRL DA ++ + + + V+W T+L G +HG
Sbjct: 449 HYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHG 493
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 169/379 (44%), Gaps = 41/379 (10%)
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M G++ + + ++ A ++ GR+LH +I GF + + +L Y+KC
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
L+++ + F+ M+ D+ +W+++I+ + + A+ L + M+ EG PN+ T++ L
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSW 448
+ + + G+ H I+ + V+ +L++MY KC + +ARKVF+ + ++N+ S+
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180
Query: 449 NTMLVGYAQHGLGREALEIYSMMQE-NKIKPNDNTFIGVLSACVHIGLVEEG-------- 499
M+ Y Q G EALE++S M + I+PN TF +L A +G +E+G
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240
Query: 500 ---------------------------WHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
F+SM + IS S++ +A G
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVIS-----WTSMIAAYAQHGNP 295
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
+ A K +EP+ V + L+ C L GR +++ L ++Y
Sbjct: 296 QEALNLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQMETSLLSMY 355
Query: 593 AEANMWDETAKVRKIMKEK 611
A D+ +V MK +
Sbjct: 356 ARCGSLDDARRVFNRMKTR 374
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 207/712 (29%), Positives = 351/712 (49%), Gaps = 62/712 (8%)
Query: 20 YVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTY 79
Y+ +DA + + + + W+ L+ + G + A+ M+ +P+++T
Sbjct: 93 YLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTL 152
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
A+ AC RSG HG + +G E N V N L+ MY + G L A VFD
Sbjct: 153 PYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITR 212
Query: 140 R---NSISWVSLLSSYCQCGEHVHGLKIF-----LLSRKSGVAISEF-SCASVLGACAVL 190
+ + ISW S+++++ + L +F ++ K+ S+ S ++L ACA L
Sbjct: 213 KGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASL 272
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW---- 246
L +IHS + D FV LI+ YAKC + A VF+ ++ D+ +W
Sbjct: 273 KALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMV 332
Query: 247 -------------------------------SALIGGYAQLGKACEAIDLFVKMFSSGLM 275
SA+I GYAQ G EA+D F +M G
Sbjct: 333 TGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSE 392
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT------------FVANTVLDFY 323
P+ VT +L A A + G + H+ +K S V N ++D Y
Sbjct: 393 PNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMY 452
Query: 324 SKCELLEESLKTFDEMD--EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC--PNL 379
SKC + + F+ + E +VV+W +I G+ +A++L +M+ + + PN
Sbjct: 453 SKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNA 512
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNV-VIGSALVDMYAKCGRLNDARKVF 437
YT S IL + + ++ GKQ H + + ++S+V + + L+DMY+KCG ++ AR VF
Sbjct: 513 YTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVF 572
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D + +N VSW +M+ GY HG G+EAL+I+ MQ+ P+D +F+ +L AC H G+V+
Sbjct: 573 DSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVD 632
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+G YF+ M D+G+ H A V+ L A G+ +A++ I+ P+EP+ +W LLS
Sbjct: 633 QGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSA 692
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
C+ H ++ L YA K++S E+ ++ ++SN+YA A W + A++R++MK+ +KK
Sbjct: 693 CRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRP 752
Query: 618 GCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
GCSW + + F + +++ ++ +L + GYVP+ ++ H
Sbjct: 753 GCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALH 804
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 249/543 (45%), Gaps = 76/543 (13%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER---NVISWSALISGFSQIGMPEVA 60
+GF NV N L+ MY + + DA +FDE+ + +VISW+++++ + P A
Sbjct: 178 NGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTA 237
Query: 61 LNYFRLMVCCVLEP------NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS 114
L+ F M V E + + V + ACAS KEIH R+G ++ V
Sbjct: 238 LDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVC 297
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N LI+ Y KCG + A VF+ ++ +SW ++++ Y Q G+ ++F RK +
Sbjct: 298 NALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIP 357
Query: 175 I-----------------------------------SEFSCASVLGACAVLGNLKVGMQI 199
+ + + S+L ACA LG L GM+
Sbjct: 358 LDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMET 417
Query: 200 HSLVF-KCALEFDK-----------FVAMGLINLYAKCEKLDLASRVFSNI--QLPDLTA 245
H+ KC L D V LI++Y+KC A +F++I + ++
Sbjct: 418 HAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVT 477
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSS--GLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W+ +IGGYAQ G + +A+ LF +M S + P+ T S +L A A + G+Q+H+
Sbjct: 478 WTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAY 537
Query: 304 IIKMG--FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ + SS FVAN ++D YSKC ++ + FD M + + VSW ++++G+
Sbjct: 538 VTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGK 597
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA-- 419
EA+++ M G P+ ++ +L S ++ G + I++ + VI SA
Sbjct: 598 EALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLD-YFDIMRSDYG---VIASAQH 653
Query: 420 ---LVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG---LGREAL-EIYSMM 471
++D+ A+ GRL+ A K + + + W +L H L AL ++ SM
Sbjct: 654 YACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMK 713
Query: 472 QEN 474
EN
Sbjct: 714 AEN 716
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/506 (24%), Positives = 230/506 (45%), Gaps = 62/506 (12%)
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
++ Y CG S A V + + ++ W L+ ++ + G + + ++G
Sbjct: 89 VVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPD 148
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
F+ L AC L + + G H L+ E + FV L+ +Y++ L+ AS VF
Sbjct: 149 HFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFD 208
Query: 237 NIQ---LPDLTAWSALIGGYAQLGKACEAIDLFVKMFS------SGLMPSEVTFSYVLGA 287
I + D+ +W++++ + + A+DLF +M + + ++ +L A
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPA 268
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
A +K +++HS I+ G + FV N ++D Y+KC +++++ F+ M+ DVVSW
Sbjct: 269 CASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSW 328
Query: 348 NALIAGHLASCHYGEAIELLKDMLFE---------------------------------- 373
NA++ G+ S +G A EL K+M E
Sbjct: 329 NAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMIL 388
Query: 374 -GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS------------NVVIGSAL 420
G PN T ++L+ + + A+ G +TH +K S ++V+ +AL
Sbjct: 389 YGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNAL 448
Query: 421 VDMYAKCGRLNDARKVFDHLS--SKNLVSWNTMLVGYAQHGLGREALEIYSMM--QENKI 476
+DMY+KC AR +F+ + +N+V+W M+ GYAQ+G +AL+++S M + +
Sbjct: 449 IDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAV 508
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS-VVHLFACRGQTRRA 535
PN T +L AC H+ + G + R H + +A+ ++ +++ G A
Sbjct: 509 APNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTA 568
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTH 561
S P + N+V W ++SG H
Sbjct: 569 RNVFDSMP-KRNEVSWTSMMSGYGMH 593
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 216/457 (47%), Gaps = 86/457 (18%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG------ 55
I +G + N L+ Y K + DA +F+ M ++V+SW+A+++G++Q G
Sbjct: 286 IRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAF 345
Query: 56 ----------MP-------------------EVALNYFRLMVCCVLEPNYYTYVGAVSAC 86
+P + AL+ F+ M+ EPN T + +SAC
Sbjct: 346 ELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSAC 405
Query: 87 ASRGDARSGKEIHG-RMYRSGLELNSH-----------VSNCLINMYGKCGLLSSAQFVF 134
AS G G E H + + L L++ V N LI+MY KC +A+ +F
Sbjct: 406 ASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIF 465
Query: 135 DA--SLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVL 190
++ ERN ++W ++ Y Q G+ LK+F ++S+ VA + ++ + +L ACA L
Sbjct: 466 NSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHL 525
Query: 191 GNLKVGMQIHSLVFKCALEFDK---FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+L++G QIH+ V + E++ FVA LI++Y+KC +D A VF ++ + +W+
Sbjct: 526 SSLRMGKQIHAYVTR-HHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWT 584
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+++ GY G+ EA+D+F KM +G +P +++F +L A + HS ++
Sbjct: 585 SMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACS-----------HSGMVDQ 633
Query: 308 GFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGH 354
G F + + V+D ++ L+++ KT EM E W AL
Sbjct: 634 GLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVAL---- 689
Query: 355 LASCHYGEAIELLK---DMLFEGHCPNLYTYSNILNI 388
L++C +EL + + L N +Y+ I NI
Sbjct: 690 LSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNI 726
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 156/335 (46%), Gaps = 10/335 (2%)
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
K + G++ Y C A V + W+ L+ + + G+ AI + +M
Sbjct: 83 KSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLR 142
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
+G P T Y L A ++ G H LI GF S FV N ++ YS+ LE+
Sbjct: 143 AGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLED 202
Query: 332 SLKTFDEMDEH---DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+ FDE+ DV+SWN+++A H+ + A++L +M H S+I++I
Sbjct: 203 ASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISI 262
Query: 389 SSDIP------AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+ +P A+ K+ H ++ G ++ + +AL+D YAKCG + DA VF+ +
Sbjct: 263 VNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEF 322
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
K++VSWN M+ GY Q G A E++ M++ I + T+ V++ G +E
Sbjct: 323 KDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDT 382
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
F MI +G P I S++ A G + E
Sbjct: 383 FQQMIL-YGSEPNSVTIISLLSACASLGALSQGME 416
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 121/282 (42%), Gaps = 30/282 (10%)
Query: 258 KACEAIDL-FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF-- 314
KA + I + F+ + S+ +V+ ++ + + RQ+H II G S+
Sbjct: 7 KAAKRIGVQFLSVASAECTGRDVSPTHFASLLKECRSVNTVRQIHQKIIAYGLLSYPASL 66
Query: 315 ------------------VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
+ V+ Y C ++L + + V WN L+ H+
Sbjct: 67 LSVSLPPLPSHSYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIE 126
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
AI + ML G P+ +T L ++P+ G H I GF+SNV +
Sbjct: 127 EGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFV 186
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSK---NLVSWNTMLVGYAQHGLGREALEIYSMM-- 471
+ALV MY++ G L DA VFD ++ K +++SWN+++ + + R AL+++S M
Sbjct: 187 CNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTT 246
Query: 472 ----QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
+ + + + + +L AC + + + + IR+
Sbjct: 247 IVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRN 288
>gi|357124385|ref|XP_003563881.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 670
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 202/632 (31%), Positives = 330/632 (52%), Gaps = 14/632 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N+LLL Y + S +A+ LFDEMP RNV+S S LIS S++G A F
Sbjct: 27 GFLASTYLCNNLLLSYFRSSLPAEARGLFDEMPHRNVVSCSVLISNVSRLGALCEAFLLF 86
Query: 65 RLMVCC-----VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
M+ PN + VS CA D +G ++H + G+ + V+ L++
Sbjct: 87 SDMLLSGGRGSYDRPNSFALGALVSGCARASDIVAGSQVHASAVKFGVAGDESVAGALVD 146
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC-GEHVH-----GLKIFLLSRKSGV 173
MY KCG + S+ VF S +R+ +SW S+++ G H L +L K
Sbjct: 147 MYSKCGCVDSSWRVFALSPQRSVVSWTSMIACLVNNDGSSGHRDAALSLLRKMLLLKIWP 206
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+ FSC +L G L G QIH + K E D + LI +Y +C +D ++
Sbjct: 207 TNATFSC--ILKVFDAPGLLPGGKQIHGCLLKMGTEVDPALGTALIAMYGRCGGVDEIAK 264
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+ I+ D + ++L YA+ G + EA+ F +M + + T + +L + + +
Sbjct: 265 LSCRIR-HDAFSRTSLFVAYARNGYSMEAVWNFREMVMEKMAIDQSTITSLLQVCSSLGQ 323
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
++H +K F T + N + Y +C + + FD ++ D++SW AL+
Sbjct: 324 LRLAEEVHCYALKTLFKLDTSLLNATITVYGRCGDIATAEIIFDLLENKDIISWTALLTC 383
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
+ + E + K+ML +G ++ +++L S G+Q H VK G D
Sbjct: 384 YAQNDLPQETLLFFKEMLRKGLGSPIFCITSVLRACSSTTNHAVGRQIHSRAVKLGIDDA 443
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ +ALV MYAKCG ++ A K+F+ + S+ ++SWN ++ ++QHG A++++ +MQE
Sbjct: 444 DSVENALVTMYAKCGSVHIALKIFNSMRSRGIISWNALITSFSQHGNEVAAIQLFDLMQE 503
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
I P+D TF+G+LS+C +GL+ EG YF M + + P+M+H +V LFA G+
Sbjct: 504 EGICPDDYTFVGLLSSCSRMGLIAEGCEYFKQMKALYNVEPKMEHYTCMVDLFARAGRFS 563
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A EFI + P +P+++VW LL+ C+TH ++ LGR AA+KIL PED S +I LSN++A
Sbjct: 564 DALEFIDALPCQPDQLVWEALLASCRTHGNVELGRLAAKKILEIRPEDPSPYITLSNIHA 623
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQ 625
+MW+E R + + ++K G SW + Q
Sbjct: 624 SVHMWEEKTWDRTVFDFQRVRKYAGSSWVDPQ 655
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 194/411 (47%), Gaps = 11/411 (2%)
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
RG R +HG + G ++++ N L+ Y + L + A+ +FD RN +S L
Sbjct: 11 RG-GRHPSTVHGAAVKLGFLASTYLCNNLLLSYFRSSLPAEARGLFDEMPHRNVVSCSVL 69
Query: 149 LSSYCQCGEHVHGLKIF---LLS--RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV 203
+S+ + G +F LLS R S + F+ +++ CA ++ G Q+H+
Sbjct: 70 ISNVSRLGALCEAFLLFSDMLLSGGRGSYDRPNSFALGALVSGCARASDIVAGSQVHASA 129
Query: 204 FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG----GYAQLGKA 259
K + D+ VA L+++Y+KC +D + RVF+ + +W+++I G
Sbjct: 130 VKFGVAGDESVAGALVDMYSKCGCVDSSWRVFALSPQRSVVSWTSMIACLVNNDGSSGHR 189
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
A+ L KM + P+ TFS +L F GG+Q+H ++KMG + +
Sbjct: 190 DAALSLLRKMLLLKIWPTNATFSCILKVFDAPGLLPGGKQIHGCLLKMGTEVDPALGTAL 249
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
+ Y +C ++E K + HD S +L + + + EA+ ++M+ E +
Sbjct: 250 IAMYGRCGGVDEIAKLSCRI-RHDAFSRTSLFVAYARNGYSMEAVWNFREMVMEKMAIDQ 308
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
T +++L + S + + ++ HC +K F + + +A + +Y +CG + A +FD
Sbjct: 309 STITSLLQVCSSLGQLRLAEEVHCYALKTLFKLDTSLLNATITVYGRCGDIATAEIIFDL 368
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
L +K+++SW +L YAQ+ L +E L + M + VL AC
Sbjct: 369 LENKDIISWTALLTCYAQNDLPQETLLFFKEMLRKGLGSPIFCITSVLRAC 419
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 296 GGRQ---LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
GGR +H +K+GF + T++ N +L Y + L E+ FDEM +VVS + LI+
Sbjct: 12 GGRHPSTVHGAAVKLGFLASTYLCNNLLLSYFRSSLPAEARGLFDEMPHRNVVSCSVLIS 71
Query: 353 GHLASCHYGEAIELLKDMLFEG-----HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
EA L DML G PN + +++ + I G Q H VK
Sbjct: 72 NVSRLGALCEAFLLFSDMLLSGGRGSYDRPNSFALGALVSGCARASDIVAGSQVHASAVK 131
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH----GLGRE 463
G + + ALVDMY+KCG ++ + +VF +++VSW +M+ + G
Sbjct: 132 FGVAGDESVAGALVDMYSKCGCVDSSWRVFALSPQRSVVSWTSMIACLVNNDGSSGHRDA 191
Query: 464 ALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
AL + M KI P + TF +L GL+ G
Sbjct: 192 ALSLLRKMLLLKIWPTNATFSCILKVFDAPGLLPGG 227
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 209/679 (30%), Positives = 336/679 (49%), Gaps = 61/679 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+IT+G NV + L+ +Y F + + + +FD +++ W+++I G A
Sbjct: 55 IITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKSHFSNGNYFKA 114
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLIN 119
+++ M PN +T V+ CA GK IHG + +SGL NS V + +
Sbjct: 115 FDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAENSAVGSSFVY 174
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG++ A +FD + R+ +SW +L+ Y + GL+ R+ G + +
Sbjct: 175 MYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVN 234
Query: 180 CASVLG---ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
++ G AC LG + G +H L K L + V L+++Y+KC ++ A F
Sbjct: 235 SRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFC 294
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM------------------FSSGLMPSE 278
+ D+ +W+++IG A+ G E ++LF M F + +M E
Sbjct: 295 QVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVRE 354
Query: 279 --------VTFSYVL---------------GAFADVKETIGGRQ--------------LH 301
V +YVL G ++ G +H
Sbjct: 355 GKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSKESWNTMVFGYVH 414
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
IIK +AN+++D Y K L + K F + DVV+WN LI+ + S HY
Sbjct: 415 CYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCRT-QRDVVTWNTLISSYTHSGHYA 473
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EAI L +M+ E PN T +L+ +P++E GK H I + GF+ NV +G+ALV
Sbjct: 474 EAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTALV 533
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAKCG+L +R++F+ + K+++SWN M+ GY HG A+E++ M+++ +KPN
Sbjct: 534 DMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPNAI 593
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ +LSAC H G V+EG F+ M + + I P + H A + L G + A + ++S
Sbjct: 594 TFLSLLSACTHAGYVDEGKQLFDRM-QYYSIKPNLKHFACMADLLGRSGNLQEAEDLVQS 652
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
PI P+ VW LLS CK H ++ +G A+ + +DPE+ +IMLSN+Y WDE
Sbjct: 653 MPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDPENDGYYIMLSNMYGSMGKWDEA 712
Query: 602 AKVRKIMKEKSLKKDTGCS 620
+ R++MKE+ + K G S
Sbjct: 713 ERARELMKERGIGKRAGWS 731
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 238/525 (45%), Gaps = 64/525 (12%)
Query: 99 HGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
H + +G N +S+ LI++Y S+ +VFD++ ++++ W S++ S+ G +
Sbjct: 52 HALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKSHFSNGNY 111
Query: 159 VHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG- 217
++ R ++F+ ++ CA L L+ G IH LV K L F + A+G
Sbjct: 112 FKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGL-FAENSAVGS 170
Query: 218 -LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
+ +YAKC ++ AS +F I + D+ +W+AL+ GY + + ++ +M G
Sbjct: 171 SFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGDG 230
Query: 277 SEVTFSYVLGAF---ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+V + G F ++ I GR LH L +K G V +++L YSKC +EE+
Sbjct: 231 EKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAH 290
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN--------------- 378
+F ++ + DV SW ++I E + L DM + P+
Sbjct: 291 NSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSM 350
Query: 379 -----------------------------LYTYSNILNISSDI--PAIEWGKQT------ 401
+Y LN + + EW K++
Sbjct: 351 MVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSKESWNTMVF 410
Query: 402 ---HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
HC I+K D +V I ++L+DMY K G L+ A K+F + +++V+WNT++ Y
Sbjct: 411 GYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCR-TQRDVVTWNTLISSYTHS 469
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
G EA+ ++ M K+ PN T + VLSAC H+ +E+G + I++ G +
Sbjct: 470 GHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKG-KMVHQYIKEGGFELNVSL 528
Query: 519 IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
++V ++A GQ ++ E S E + + W ++SG H D
Sbjct: 529 GTALVDMYAKCGQLEQSRELFNSMK-EKDVISWNVMISGYGLHGD 572
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 9/185 (4%)
Query: 380 YTYSNILN------ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
++ SN LN +S+ ++ ++H I+ G +NV I S L+ +YA + + +
Sbjct: 24 HSSSNYLNCHIDSFLSNQTQTLQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSS 83
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
VFD + K+ WN+++ + +G +A + Y M+ + PN T +++ C +
Sbjct: 84 TYVFDSTNQKDTFLWNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAEL 143
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHI-ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
+EEG Y + ++ G+ + +S V+++A G A + + + V W
Sbjct: 144 LWLEEG-KYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVMEDA-SLMFDEIVVRDVVSWT 201
Query: 553 CLLSG 557
L+ G
Sbjct: 202 ALVIG 206
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/576 (31%), Positives = 297/576 (51%), Gaps = 39/576 (6%)
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
+Y LL + +F+ +++W S++ Y G L F+ SG+
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR------ 233
SVL +CA+L +L +G +H + + L+FD + L+N+Y+K L+ + R
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 234 --------------------------VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
+F + DL +W+ +I G A+ G E + +
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
+M + L P T S VL A+ + G+++H I+ G + +VA++++D Y+KC
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
+ +S + F + E D +SWN++IAG + + + E + + ML P Y++S+I+
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ + + GKQ H I + GFD N+ I S+LVDMYAKCG + A+++FD + +++VS
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
W M++G A HG +A+E++ M+ IK VL+AC H GLV+E W YFNSM
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMT 461
Query: 508 RDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLG 567
RD GI+P ++H A+V L G+ AY+FI I P +W LLS C+ HK++ +
Sbjct: 462 RDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMA 521
Query: 568 RYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNK 627
A +IL DP +T A+I+L+N+Y+ A W E AK R M+ ++K CSW E++NK
Sbjct: 522 EKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNK 581
Query: 628 MHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++ F + + E M L + GYVPD
Sbjct: 582 VYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPD 617
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 188/388 (48%), Gaps = 32/388 (8%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
+Y + ++D+ +LF+ + ++W ++I ++ G+P +L F M+ L P++
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL----------- 127
+ + +CA D G+ +HG + R GL+ + + N L+NMY K L
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 128 ---------------------SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
S + +F+ E++ +SW ++++ + G + L++
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
+ + F+ +SVL A ++ G +IH + L+ D +VA LI++YAKC
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
++ + RVF+ + D +W+++I G Q G E + F +M + + P +FS ++
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
A A + G+QLH I + GF F+A++++D Y+KC + + + FD M D+VS
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEG 374
W A+I G +AIEL + M EG
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEG 436
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 145/248 (58%)
Query: 27 NDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSAC 86
+ +K+F+ MPE++++SW+ +I+G ++ G+ E L R M L+P+ +T +
Sbjct: 190 DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLI 249
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV 146
A D GKEIHG R GL+ + +V++ LI+MY KC ++ + VF ER+ ISW
Sbjct: 250 AENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWN 309
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
S+++ Q G GL+ F + + +S +S++ ACA L L +G Q+H + +
Sbjct: 310 SIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN 369
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
+ + F+A L+++YAKC + A ++F ++L D+ +W+A+I G A G+A +AI+LF
Sbjct: 370 GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELF 429
Query: 267 VKMFSSGL 274
+M + G+
Sbjct: 430 EQMETEGI 437
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 103/187 (55%), Gaps = 7/187 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G ++ + L+ MY K +R+ D+ ++F + ER+ ISW+++I+G Q G+ + L
Sbjct: 266 IRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 325
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+FR M+ ++P Y++ + ACA GK++HG + R+G + N +++ L++MY
Sbjct: 326 RFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 385
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + +A+ +FD R+ +SW +++ G+ +++F G+
Sbjct: 386 AKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI-------K 438
Query: 182 SVLGACA 188
+VL AC+
Sbjct: 439 AVLTACS 445
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/614 (31%), Positives = 316/614 (51%), Gaps = 39/614 (6%)
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERN--------- 141
D +GK +H +S + ++++SN +N+Y KCG LS A+ FD++ E N
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVK 82
Query: 142 ----------------------SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
++S+ +L+S Y E V + +F R+ G + F+
Sbjct: 83 AYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFT 142
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ ++ AC + + Q+H + V + Y+K L A VF +
Sbjct: 143 LSGLIAACC--DRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 240 -LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
L D +W+++I Y Q + +A+ L+ +M G T + VL A + IGGR
Sbjct: 201 GLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGR 260
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKC---ELLEESLKTFDEMDEHDVVSWNALIAGH- 354
Q H +IK GF + V + ++DFYSKC + + +S K F E+ D+V WN +I+G+
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYS 320
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN- 413
+ H EA++ + M GH P+ ++ + + S++ + GKQ H +K SN
Sbjct: 321 MNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNR 380
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ + +AL+ +Y K G L DAR+VFD + N VS+N M+ GYAQHG G EAL +Y M +
Sbjct: 381 ISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLD 440
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+ I PN+ TF+ +LSAC H G V+EG YFN+M I P +H + ++ L G+
Sbjct: 441 SGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLE 500
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A FI + P +P V W LL C+ HK++ L AA++++ P + ++ML+N+YA
Sbjct: 501 EAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYA 560
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
+A W+E A VRK M+ K ++K GCSW E++ K H F ++ +++E + ++
Sbjct: 561 DAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMK 620
Query: 654 HLFDGGYVPDPIYS 667
+ GYV D ++
Sbjct: 621 KMKKVGYVMDKKWA 634
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 149/486 (30%), Positives = 235/486 (48%), Gaps = 21/486 (4%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
PNV +YN ++ Y K S+I+ A++LFDE P+ + +S++ LISG++ A+ F+ M
Sbjct: 72 PNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRM 131
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
E + +T G ++AC R D K++H G + S V+N + Y K GLL
Sbjct: 132 RELGFEVDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 128 SSAQFVF-DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK---SGVAISEFSCASV 183
A VF R+ +SW S++ +Y G+H G K L ++ G I F+ ASV
Sbjct: 190 REAVSVFYGMDGLRDEVSWNSMIVAY---GQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS---RVFSNIQL 240
L A L +L G Q H + K + V GLI+ Y+KC D S +VF I
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILS 306
Query: 241 PDLTAWSALIGGYAQLGK-ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PDL W+ +I GY+ + + EA+ F +M G P + +F V A +++ G+Q
Sbjct: 307 PDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQ 366
Query: 300 LHSLIIKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H L IK S V N ++ Y K L ++ + FD M E + VS+N +I G+
Sbjct: 367 IHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHG 426
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF--DSNVVI 416
H EA+ L + ML G PN T+ IL+ + ++ G Q + +K F +
Sbjct: 427 HGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEG-QKYFNTMKETFKIEPEAEH 485
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH---GLGREALEIYSMMQ 472
S ++D+ + G+L +A + D + K V+W +L +H L A + +MQ
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQ 545
Query: 473 ENKIKP 478
P
Sbjct: 546 PLAATP 551
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 146/330 (44%), Gaps = 42/330 (12%)
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL----------EE---------- 331
++ G+ LH+L +K +S T+++N ++ YSKC L EE
Sbjct: 22 RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIV 81
Query: 332 -----------SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
+ + FDE + D VS+N LI+G+ + A+ L K M G + +
Sbjct: 82 KAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGF 141
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T S ++ D ++ KQ HC V GFDS + +A V Y+K G L +A VF +
Sbjct: 142 TLSGLIAACCD--RVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 441 SS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
++ VSWN+M+V Y QH G +AL +Y M K + T VL+A + + G
Sbjct: 200 DGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGG 259
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY---EFIKSSPIEPNKVVWRCLLS 556
+ +I+ G H+ S + F + R E + + P+ V+W ++S
Sbjct: 260 RQFHGKLIK-AGFHQN-SHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMIS 317
Query: 557 GC---KTHKDLVLGRYAAEKILSTDPEDTS 583
G + H + + + + + P+D S
Sbjct: 318 GYSMNEEHSEEAVKSFRQMQRIGHRPDDCS 347
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 6/160 (3%)
Query: 2 ITSGFHPNVITYNHLLL-MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
I S N I+ N+ L+ +Y K + DA+++FD MPE N +S++ +I G++Q G A
Sbjct: 372 IKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEA 431
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L ++ M+ + PN T+V +SACA G G++ M + +E + +C+I+
Sbjct: 432 LRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMID 491
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEH 158
+ G+ G L A+ DA + S++W +LL + C +H
Sbjct: 492 LLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA---CRKH 528
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 277/484 (57%), Gaps = 2/484 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+VL C ++ G ++H+ + K ++ LI Y KC+ L A VF +
Sbjct: 63 TVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPER 122
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ +W+A+I Y+Q G A +A+ LFV+M SG P+E TF+ VL + + GRQ+H
Sbjct: 123 NVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIH 182
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
S IIK+ + + +V +++LD Y+K + E+ F + E DVVS A+I+G+
Sbjct: 183 SHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDE 242
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA+EL + + EG N TY+++L S + A++ GKQ H +++ S VV+ ++L+
Sbjct: 243 EALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLI 302
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM-QENKIKPND 480
DMY+KCG L AR++FD L + ++SWN MLVGY++HG GRE LE++++M ENK+KP+
Sbjct: 303 DMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDS 362
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDH-GISPRMDHIASVVHLFACRGQTRRAYEFI 539
T + VLS C H GL ++G F M + P H VV + G+ A+EF+
Sbjct: 363 VTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFV 422
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
K P EP+ +W CLL C H +L +G + ++L +PE+ +++LSN+YA A W+
Sbjct: 423 KKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWE 482
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ +R +M +K++ K+ G SW EL +H F S + + ++ + +LS + G
Sbjct: 483 DVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAG 542
Query: 660 YVPD 663
YVPD
Sbjct: 543 YVPD 546
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 163/302 (53%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L+ N+ Y ++ C + R G+ +H M ++ ++ LI Y KC L A+
Sbjct: 54 LDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDAR 113
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD ERN +SW +++S+Y Q G L +F+ +SG +EF+ A+VL +C
Sbjct: 114 HVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSS 173
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+G QIHS + K E +V L+++YAK K+ A +F + D+ + +A+I
Sbjct: 174 GFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIIS 233
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
GYAQLG EA++LF ++ G+ + VT++ VL A + + G+Q+H+ +++ S
Sbjct: 234 GYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPS 293
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
+ + N+++D YSKC L + + FD + E V+SWNA++ G+ E +EL M+
Sbjct: 294 YVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMI 353
Query: 372 FE 373
E
Sbjct: 354 DE 355
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 154/286 (53%), Gaps = 1/286 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + + P V L++ YVK + DA+ +FD MPERNV+SW+A+IS +SQ G A
Sbjct: 84 MIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQA 143
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ EPN +T+ +++C G++IH + + E + +V + L++M
Sbjct: 144 LSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDM 203
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+ +F ER+ +S +++S Y Q G L++F ++ G+ + +
Sbjct: 204 YAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTY 263
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A + L L G Q+H+ + + + + LI++Y+KC L A R+F +
Sbjct: 264 TSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHE 323
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVL 285
+ +W+A++ GY++ G+ E ++LF M + P VT VL
Sbjct: 324 RTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVL 369
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 67/127 (52%)
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
E L M G N Y+ +LN AI G++ H ++K + V + + L+ Y
Sbjct: 44 EALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFY 103
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KC L DAR VFD + +N+VSW M+ Y+Q G +AL ++ M + +PN+ TF
Sbjct: 104 VKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFA 163
Query: 485 GVLSACV 491
VL++C+
Sbjct: 164 TVLTSCI 170
>gi|255565583|ref|XP_002523781.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536869|gb|EEF38507.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 661
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 299/500 (59%), Gaps = 7/500 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SGF ++ L+ MY+K + + +++FDEM ERNV+SW++L+ G++ G+ AL
Sbjct: 123 VKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSLLVGYAHNGLNMEAL 182
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACA-SRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M ++PN +T+ + A A S+ A G +IH + ++G E V N LINM
Sbjct: 183 ECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKNGFEATIFVCNSLINM 242
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G++ +A+ VFD + R++ISW S+++ Y G ++ +++F R +GV ++ F
Sbjct: 243 YSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFYHLRLAGVKLTNFIF 302
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ- 239
+SV+ +CA + L Q+H V K E+D + L+ Y K ++D A ++FS +
Sbjct: 303 SSVIKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGREIDDAFKIFSMMYG 362
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ ++ +W+A+I G+ Q G A +A++LF +M G+ P++ TFS +L A + + +
Sbjct: 363 IRNVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFSTILAA----QPVVSPFE 418
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H+ +IK + V +LD Y K L E+ K F+ +D+ D+V+W+A++AG+ +
Sbjct: 419 VHAQVIKSDYEKSPSVGTALLDAYVKLGNLNEASKVFERIDDKDIVAWSAMVAGYAQTGD 478
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNI-SSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
A+++L M +G PN YT+S+++N ++ A+E GKQ H +K F+ + + S
Sbjct: 479 TEGAVKILIQMAKKGVEPNEYTFSSVINACTAPTAAVEQGKQFHAWSIKSRFNDALCVSS 538
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALV MYAK G + A +VF ++LVSWN+M+ GYAQHG R+ALE++ MQ+ ++
Sbjct: 539 ALVTMYAKRGEIESANEVFRRQGVRDLVSWNSMVSGYAQHGHARKALEVFKEMQDQNLEL 598
Query: 479 NDNTFIGVLSACVHIGLVEE 498
+ TFIGV+SAC H GLV+E
Sbjct: 599 DGVTFIGVISACTHAGLVDE 618
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 163/536 (30%), Positives = 276/536 (51%), Gaps = 9/536 (1%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
AQ +FD P+++V+ + L+ +S+ +N F + L + T + ACA
Sbjct: 49 AQNVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACAC 108
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
+ G ++H +SG + V L++MY K + + VFD ERN +SW SL
Sbjct: 109 LSCKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSL 168
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL-KVGMQIHSLVFKCA 207
L Y G ++ L+ F + + + F+ A+VLGA A + G+QIH++V K
Sbjct: 169 LVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKNG 228
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
E FV LIN+Y+K + A VF N+ D +W++++ GY G EAI++F
Sbjct: 229 FEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFY 288
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
+ +G+ + FS V+ + A++KE RQLH ++K GF + ++ Y+K
Sbjct: 289 HLRLAGVKLTNFIFSSVIKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGR 348
Query: 328 LLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
++++ K F M +VVSW A+I+GHL + +A+ L +M EG PN YT+S IL
Sbjct: 349 EIDDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFSTIL 408
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+ E H ++K ++ + +G+AL+D Y K G LN+A KVF+ + K++V
Sbjct: 409 AAQPVVSPFE----VHAQVIKSDYEKSPSVGTALLDAYVKLGNLNEASKVFERIDDKDIV 464
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH-IGLVEEGWHYFNS 505
+W+ M+ GYAQ G A++I M + ++PN+ TF V++AC VE+G +
Sbjct: 465 AWSAMVAGYAQTGDTEGAVKILIQMAKKGVEPNEYTFSSVINACTAPTAAVEQGKQFHAW 524
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
I+ + + +++V ++A RG+ A E + + + V W ++SG H
Sbjct: 525 SIKSR-FNDALCVSSALVTMYAKRGEIESANEVFRRQGVR-DLVSWNSMVSGYAQH 578
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 207/369 (56%), Gaps = 5/369 (1%)
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KC + AQ VFD S +++ + LL Y + H + +F+ +S + + +
Sbjct: 45 KCSI---AQNVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSC 101
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
VL ACA L K G+Q+H K D V L+++Y K E ++ RVF ++ +
Sbjct: 102 VLKACACLSCKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERN 161
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQLH 301
+ +W++L+ GYA G EA++ F +M + + P+ TF+ VLGA AD K G Q+H
Sbjct: 162 VVSWTSLLVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIH 221
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+++IK GF + FV N++++ YSK +++ + FD M D +SWN+++AG++A+ Y
Sbjct: 222 TMVIKNGFEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYL 281
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EAIE+ + G + +S+++ ++I + + +Q H ++K GF+ + I +AL+
Sbjct: 282 EAIEMFYHLRLAGVKLTNFIFSSVIKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALM 341
Query: 422 DMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
Y K ++DA K+F + +N+VSW ++ G+ Q+GL +A+ ++ M ++PND
Sbjct: 342 VAYNKGREIDDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPND 401
Query: 481 NTFIGVLSA 489
TF +L+A
Sbjct: 402 YTFSTILAA 410
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 193/372 (51%), Gaps = 6/372 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +GF + N L+ MY K + +A+ +FD M R+ ISW+++++G+ G+ A
Sbjct: 224 VIKNGFEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEA 283
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F + ++ + + + +CA+ + +++HG++ + G E + ++ L+
Sbjct: 284 IEMFYHLRLAGVKLTNFIFSSVIKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVA 343
Query: 121 YGKCGLLSSAQFVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y K + A +F RN +SW +++S + Q G + +F + GV ++++
Sbjct: 344 YNKGREIDDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYT 403
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+++L A V+ ++H+ V K E V L++ Y K L+ AS+VF I
Sbjct: 404 FSTILAAQPVVSPF----EVHAQVIKSDYEKSPSVGTALLDAYVKLGNLNEASKVFERID 459
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA-FADVKETIGGR 298
D+ AWSA++ GYAQ G A+ + ++M G+ P+E TFS V+ A A G+
Sbjct: 460 DKDIVAWSAMVAGYAQTGDTEGAVKILIQMAKKGVEPNEYTFSSVINACTAPTAAVEQGK 519
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q H+ IK F+ V++ ++ Y+K +E + + F D+VSWN++++G+
Sbjct: 520 QFHAWSIKSRFNDALCVSSALVTMYAKRGEIESANEVFRRQGVRDLVSWNSMVSGYAQHG 579
Query: 359 HYGEAIELLKDM 370
H +A+E+ K+M
Sbjct: 580 HARKALEVFKEM 591
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 150/268 (55%), Gaps = 1/268 (0%)
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
K +A VF D+ + L+ Y++ E ++LFV + S L+ T S VL
Sbjct: 45 KCSIAQNVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLK 104
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
A A + G Q+H +K GF V +++D Y K E +EE + FDEM+E +VVS
Sbjct: 105 ACACLSCKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVS 164
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI-EWGKQTHCCI 405
W +L+ G+ + EA+E +M PN +T++ +L +D AI + G Q H +
Sbjct: 165 WTSLLVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMV 224
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
+K GF++ + + ++L++MY+K G + +A+ VFD++ +++ +SWN+M+ GY +GL EA+
Sbjct: 225 IKNGFEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAI 284
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHI 493
E++ ++ +K + F V+ +C +I
Sbjct: 285 EMFYHLRLAGVKLTNFIFSSVIKSCANI 312
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 121/238 (50%), Gaps = 14/238 (5%)
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL-----KDMLFEGHCPNL 379
KC + + FD + DVV N L+ + + + E + L D+L +G
Sbjct: 45 KCSIAQ---NVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGS---- 97
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
T S +L + + ++G Q H VK GF ++ +G++LVDMY K + + ++VFD
Sbjct: 98 -TLSCVLKACACLSCKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDE 156
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ +N+VSW ++LVGYA +GL EALE + MQ IKPN TF VL A + +
Sbjct: 157 MEERNVVSWTSLLVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADK 216
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++M+ +G + S++++++ G + A + + + + + + W +++G
Sbjct: 217 GVQIHTMVIKNGFEATIFVCNSLINMYSKSGMVKNA-KAVFDNMVTRDAISWNSMVAG 273
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 191/610 (31%), Positives = 333/610 (54%), Gaps = 7/610 (1%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A KLFD+M + N++++++LISG+ Q+ + + F L+ + Y GA++AC+
Sbjct: 20 ADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGALTACSQ 79
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
G+ +GK IHG + GL ++N LI+MY KCG + A+ +FD S + + +SW SL
Sbjct: 80 SGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSL 139
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA--VLGNLKVGMQIHSLVFKC 206
++ Y Q G++ L I ++G+A + ++ S L AC+ G G +H K
Sbjct: 140 IAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKL 199
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK-----ACE 261
L D V L+++YAK LD A ++F + ++ ++A++ G Q A +
Sbjct: 200 GLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYK 259
Query: 262 AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
A++LF +M S G+ PS T+S +L A V++ +Q+H+L+ K G S ++ + ++D
Sbjct: 260 ALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILID 319
Query: 322 FYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYT 381
YS + ++L F+ + +V A+I G+L + + A+ L ++L P+ +
Sbjct: 320 LYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFI 379
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
+S I++ +++ + G+Q K G + ++ + MYAK G L A F +
Sbjct: 380 FSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQME 439
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
+ ++VSW+TM+ AQHG EAL + +M+ I+PN F+GVL AC H GLVEEG
Sbjct: 440 NPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLR 499
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
YF++M +D+ + + H VV L G+ A I E V+WR LLS C+ H
Sbjct: 500 YFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIH 559
Query: 562 KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSW 621
KD V + A+K++ +P ++++++L N+Y +A +KVR +M+E+ +KK+ G SW
Sbjct: 560 KDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSW 619
Query: 622 TELQNKMHYF 631
++ +K++ F
Sbjct: 620 IQIGDKVYSF 629
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 236/486 (48%), Gaps = 47/486 (9%)
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG SA +FD + N +++ SL+S Y Q + +F +R+ G+ + +++CA
Sbjct: 13 KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
L AC+ GNL G IH L+ L + LI++Y+KC ++D A +F + D
Sbjct: 73 ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA----FADVKETIGGR 298
+W++LI GY Q GK E + + KM +GL + T L A F K + G
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCK--MFGT 190
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS- 357
LH IK+G V +LD Y+K L+++++ FD+M + +VV +NA++AG L
Sbjct: 191 MLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQE 250
Query: 358 -----CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
C Y +A+ L +M G P+++TYS++L + ++ KQ H + K G S
Sbjct: 251 TIEDKCAY-KALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLS 309
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+ IGS L+D+Y+ G + DA F+ + + +V M+ GY Q+G AL ++ +
Sbjct: 310 DEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELL 369
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEG-----------------------WHYFNS---- 505
+ KP++ F ++S+C ++G++ G W Y S
Sbjct: 370 TYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLY 429
Query: 506 ---MIRDHGISPRMDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSGCK 559
+ +P + ++++ A G + R +E +KS IEPN + +L C
Sbjct: 430 AANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIAC- 488
Query: 560 THKDLV 565
+H+ LV
Sbjct: 489 SHRGLV 494
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 222/463 (47%), Gaps = 13/463 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G V+ N L+ MY K +++ A+ LFD + + +SW++LI+G+ Q G E
Sbjct: 93 ILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEEL 152
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACAS--RGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
L + M L N YT A+ AC+S G G +H + GL L+ V L+
Sbjct: 153 LTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALL 212
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ-------CGEHVHGLKIFLLSRKS 171
+MY K G L A +FD +++N + + ++++ Q C L +F +
Sbjct: 213 DMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCA--YKALNLFFEMKSC 270
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G+ S F+ +S+L AC ++ + K Q+H+L+ K L D+++ LI+LY+ + A
Sbjct: 271 GIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDA 330
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
F++I + +A+I GY Q G+ A+ LF ++ + P E FS ++ + A++
Sbjct: 331 LLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANM 390
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
G Q+ K+G S FT N+ + Y+K L + TF +M+ D+VSW+ +I
Sbjct: 391 GMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMI 450
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GF 410
+ H EA+ + M G PN + + +L S +E G + + K
Sbjct: 451 CSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKM 510
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN-LVSWNTML 452
+V +VD+ + GRL DA + L ++ V W +L
Sbjct: 511 KLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALL 553
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G I N + MY K + A F +M +++SWS +I +Q G AL +F
Sbjct: 407 GISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFF 466
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN--CLINMYG 122
LM C +EPN++ ++G + AC+ RG G M + ++ HV + C++++ G
Sbjct: 467 ELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKD-YKMKLHVKHCVCVVDLLG 525
Query: 123 KCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
+ G L+ A+ + E + W +LLS+
Sbjct: 526 RAGRLADAESLILRLGFEHEPVMWRALLSA 555
>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 310/550 (56%), Gaps = 2/550 (0%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
N Y VS CA G G + H + + G N ++ + +++MY KCG +SSA+ +F
Sbjct: 68 NPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISSARVLF 127
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D +R ++W SL+ Y +++F+ K+ + +S FS +S L C+ L +
Sbjct: 128 DQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEARE 187
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
VG Q+H L+ K L ++ V L+++Y+KC +D + VF ++ ++ W++++ GY+
Sbjct: 188 VGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYS 247
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q+ K EA+ L +M L P+ VT++ +L +F+ Q+H II++G S +
Sbjct: 248 QIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVY 307
Query: 315 VANTVLDFYSKCEL-LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+A T++ YSKC LE+ K + D ++WNA+IAG+ + EA+ +M
Sbjct: 308 IAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQA 367
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G + YT ++++ + +E GK H I + G+ S++ + + LV MYA+CG + D+
Sbjct: 368 GIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYISHLNVQNGLVSMYARCGAIGDS 427
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
++VF + +++SWN +L +A HG GREA+E++ M++ +IKPN +TF+ VL AC H+
Sbjct: 428 KRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPNSSTFLAVLCACSHV 487
Query: 494 GLVEEGWHYFNSMIRDHGISP-RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
G V++G YF++M D + P +++H AS+V F G A FI S PI P V++
Sbjct: 488 GFVDKGIEYFDTMKSDILLEPLKVEHYASLVDTFGRAGYLNEAEAFINSMPIVPAPSVYK 547
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LLS H + + +A+K+L P D + +++LS+V WD+ A +RK+M ++
Sbjct: 548 ALLSASLVHGNREIAARSAKKLLELWPNDPATYVLLSSVLTVDGNWDDAADLRKLMCDRG 607
Query: 613 LKKDTGCSWT 622
L+K G SWT
Sbjct: 608 LRKKPGYSWT 617
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 238/459 (51%), Gaps = 43/459 (9%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF NV + ++ MY K I+ A+ LFD+MP+R V++W++LI G+ + P++A+ F
Sbjct: 99 GFISNVYICSAVVDMYAKCGEISSARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELF 158
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ + + ++ ++ C+ G ++HG + ++GL N V L++MY KC
Sbjct: 159 IKMLKAAINVSAFSVSSCLAGCSQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKC 218
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQC---GEHVHGLKIFLLS--RKSGVA----I 175
G + ++ VFD + RN I+W S+++ Y Q E + +K +L R + V +
Sbjct: 219 GDVDDSRLVFDHMVNRNVITWTSMVTGYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLL 278
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC-EKLDLASRV 234
S FS L C +Q+H + + LE + ++A L+ +Y+KC L+ +V
Sbjct: 279 SSFSGPDCLSYC---------LQVHCCIIQLGLESNVYIAATLVTVYSKCSSSLEDFKKV 329
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
S + D AW+A+I GY++LG+ EA+ F +M +G+ T + V+GA +
Sbjct: 330 CSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFL 389
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G+ +H+LI + G+ S V N ++ Y++C + +S + F M+EHDV+SWNAL+
Sbjct: 390 EEGKAMHALIHRTGYISHLNVQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALLT-- 447
Query: 355 LASCHYG---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
A H+G EA+EL + M PN T+ +L S + ++ G + FD
Sbjct: 448 -AFAHHGYGREAVELFEQMRKTEIKPNSSTFLAVLCACSHVGFVDKGIEY--------FD 498
Query: 412 ---SNVVIG-------SALVDMYAKCGRLNDARKVFDHL 440
S++++ ++LVD + + G LN+A + +
Sbjct: 499 TMKSDILLEPLKVEHYASLVDTFGRAGYLNEAEAFINSM 537
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 160/292 (54%), Gaps = 1/292 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G NV+ L+ MY K ++D++ +FD M RNVI+W+++++G+SQI P+ A
Sbjct: 196 ILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYSQIEKPDEA 255
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ + MV L PN TY +S+ + ++H + + GLE N +++ L+ +
Sbjct: 256 MALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVYIAATLVTV 315
Query: 121 YGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KC L + V + ++I+W ++++ Y + G H L+ F +++G+ I ++
Sbjct: 316 YSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQAGIDIDSYT 375
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV+GA L+ G +H+L+ + V GL+++YA+C + + RVF ++
Sbjct: 376 LTSVVGAIGNSSFLEEGKAMHALIHRTGYISHLNVQNGLVSMYARCGAIGDSKRVFWFME 435
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
D+ +W+AL+ +A G EA++LF +M + + P+ TF VL A + V
Sbjct: 436 EHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPNSSTFLAVLCACSHV 487
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 2/193 (1%)
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L+ + G N Y + I++ + + G Q H I+K GF SNV I SA+VDMY
Sbjct: 55 DLIAEFTRHGSLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMY 114
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG ++ AR +FD + + +V+WN+++ GY + A+E++ M + I + +
Sbjct: 115 AKCGEISSARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVS 174
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
L+ C + E G + +I G+ + S+V +++ G + + +
Sbjct: 175 SCLAGCSQLEAREVGTQ-VHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDS-RLVFDHMV 232
Query: 545 EPNKVVWRCLLSG 557
N + W +++G
Sbjct: 233 NRNVITWTSMVTG 245
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G+ ++ N L+ MY + I D++++F M E +VISW+AL++ F+ G A+
Sbjct: 402 TGYISHLNVQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVEL 461
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGL--ELNSHVSNCLINMY 121
F M ++PN T++ + AC+ G G E M L L L++ +
Sbjct: 462 FEQMRKTEIKPNSSTFLAVLCACSHVGFVDKGIEYFDTMKSDILLEPLKVEHYASLVDTF 521
Query: 122 GKCGLLSSAQ 131
G+ G L+ A+
Sbjct: 522 GRAGYLNEAE 531
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/570 (32%), Positives = 309/570 (54%), Gaps = 8/570 (1%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
CA G +H ++G+ + VSN +IN+Y KCG + A+ +FD +RN +SW
Sbjct: 13 CAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSW 72
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+++S Y Q G+ + L +F R + +E+ ASV+ ACA L L G+Q+H+ K
Sbjct: 73 SAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHAQSLK 129
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
FV+ LI++Y KC A V + + P+ +++ALI G+ + + + I+
Sbjct: 130 LGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEA 189
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F M G P TFS +LG + G QLH +IK+ F+ N ++ YSK
Sbjct: 190 FKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSK 249
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC---PNLYTY 382
L+EE+ K F + E D++SWN L+ + A+ + +DML C P+ +T+
Sbjct: 250 FNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDML--DVCFVKPDDFTF 307
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
+ +L + + +I GKQ H +++ +V + +ALV+MYAKCG + ++ VF S
Sbjct: 308 AGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSD 367
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
+NLVSWNT++ + HGLG ALE + M+ I P+ TF+G+L+AC H GLVEEG Y
Sbjct: 368 RNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVY 427
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
FNSM +GI P ++H + ++ L G+ + A E+++ P + ++ LLS C+ H
Sbjct: 428 FNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHG 487
Query: 563 DLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWT 622
D+V+G + A ++L P TS +++LSN+YA MW A+ K++K LKK+ G S
Sbjct: 488 DMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGLKKEPGHSLI 547
Query: 623 ELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
++ F+ + + ++ + + L+
Sbjct: 548 DVMGMFEKFTMGDLSHSRIEEIKDTIKMLN 577
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 226/441 (51%), Gaps = 5/441 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G ++I NH++ +Y K + A+++FDEM +RN++SWSA+ISG+ Q G P +AL
Sbjct: 30 LKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQTGQPLLAL 89
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
N F M + PN Y + +SACAS G ++H + + G S VSN LI+MY
Sbjct: 90 NLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMY 146
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCGL + A V + E N++S+ +L++ + + + G++ F + R+ G A F+ +
Sbjct: 147 MKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFS 206
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+LG C + GMQ+H + K LE F+ +I +Y+K ++ A +VF I+
Sbjct: 207 GLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEK 266
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM-PSEVTFSYVLGAFADVKETIGGRQL 300
DL +W+ L+ A+ +F M + P + TF+ VL A A + G+Q+
Sbjct: 267 DLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQI 326
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +I+ V+N +++ Y+KC ++ S F + ++VSWN +IA
Sbjct: 327 HGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLG 386
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSA 419
A+E + M G P+ T+ +L + +E G+ + + G N+ S
Sbjct: 387 ARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSC 446
Query: 420 LVDMYAKCGRLNDARKVFDHL 440
L+D+ + GRL +A + + L
Sbjct: 447 LIDLLGRAGRLQEAEEYMEKL 467
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 204/387 (52%), Gaps = 16/387 (4%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L CA + G+ +H+ K + D V+ +INLY+KC + A R+F +
Sbjct: 7 GSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSD 66
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L +WSA+I GY Q G+ A++LF +M ++P+E F+ V+ A A + G Q+
Sbjct: 67 RNLVSWSAIISGYDQTGQPLLALNLFSQM---RIVPNEYVFASVISACASLTALSQGLQV 123
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +K+G S +FV+N ++ Y KC L ++L + M E + VS+NALIAG + +
Sbjct: 124 HAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQP 183
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ IE K M +G P+ +T+S +L I + G Q HC ++K + + IG+ +
Sbjct: 184 EKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVI 243
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPN 479
+ MY+K + +A KVF + K+L+SWNT++ AL ++ M+ +KP+
Sbjct: 244 ITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPD 303
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIR-----DHGISPRMDHIASVVHLFACRGQTRR 534
D TF GVL+AC + + G +IR D G+S ++V+++A G +
Sbjct: 304 DFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSN------ALVNMYAKCGSIKN 357
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+Y+ + + + N V W +++ H
Sbjct: 358 SYDVFRRTS-DRNLVSWNTIIAAFGNH 383
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 107/197 (54%), Gaps = 1/197 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + N ++ MY KF+ I +A+K+F + E+++ISW+ L++ E A
Sbjct: 228 MIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERA 287
Query: 61 LNYFRLMV-CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L FR M+ C ++P+ +T+ G ++ACA R GK+IHG + R+ + VSN L+N
Sbjct: 288 LRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVN 347
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG + ++ VF + +RN +SW ++++++ G L+ F + G+ +
Sbjct: 348 MYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVT 407
Query: 180 CASVLGACAVLGNLKVG 196
+L AC G ++ G
Sbjct: 408 FVGLLTACNHAGLVEEG 424
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + + +V N L+ MY K I ++ +F +RN++SW+ +I+ F G+ A
Sbjct: 330 LIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARA 389
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L +F M + P+ T+VG ++AC G G+ M + G+ N +CLI+
Sbjct: 390 LEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLID 449
Query: 120 MYGKCGLLSSAQ 131
+ G+ G L A+
Sbjct: 450 LLGRAGRLQEAE 461
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/644 (30%), Positives = 331/644 (51%), Gaps = 5/644 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG + + L+ Y KF + A+K+FD MPERNV+ W+++I +S+ G A
Sbjct: 95 ILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEA 154
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M ++P+ T + + + + +HG G + ++SN +++M
Sbjct: 155 FSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQC---LHGSAILYGFMSDINLSNSMLSM 211
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKC + ++ +FD +R+ +SW SL+S+Y Q G L + R G +
Sbjct: 212 YGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTF 271
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A G LK+G +H + + + D V LI +Y K +D+A R+F
Sbjct: 272 GSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLD 331
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+A+I G Q G A +A+ +F +M G+ S T + V+ A A + G +
Sbjct: 332 KDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSV 391
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + + N+++ ++KC L++S FD+M++ ++VSWNA+I G+ + +
Sbjct: 392 HGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYV 451
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A+ L +M + P+ T ++L + + GK H +++ G +++ ++L
Sbjct: 452 CKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSL 511
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMY KCG L+ A++ F+ + S +LVSW+ ++VGY HG G AL YS E+ +KPN
Sbjct: 512 VDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNH 571
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
F+ VLS+C H GLVE+G + + SM RD GI+P ++H A VV L + G+ AY K
Sbjct: 572 VIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEEAYNLYK 631
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+P V +L C+ + + LG A IL P D + L++ YA N W+E
Sbjct: 632 KKFSDPVLDVLGIILDACRANGNNELGDTIANDILMLKPMDAGNFVQLAHCYASINKWEE 691
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST--SRFAQFQGI 642
+ M+ LKK G S+ ++ + F T + QFQ I
Sbjct: 692 VGEAWTHMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEI 735
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 252/519 (48%), Gaps = 5/519 (0%)
Query: 43 SWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM 102
S++A+I+ S G L + M+ + + YT+ + AC+S G +H R+
Sbjct: 36 SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95
Query: 103 YRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGL 162
SGL L++++++ LIN Y K G A+ VFD ERN + W S++ Y + G
Sbjct: 96 LVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAF 155
Query: 163 KIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
+F R+ G+ S + S+L + L +++ +H D ++ ++++Y
Sbjct: 156 SLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQC---LHGSAILYGFMSDINLSNSMLSMY 212
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
KC ++ + ++F + DL +W++L+ YAQ+G CE + L M G P TF
Sbjct: 213 GKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFG 272
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
VL A E GR LH I++ F V +++ Y K ++ + + F+ +
Sbjct: 273 SVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDK 332
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
DVV W A+I+G + + +A+ + + ML G + T ++++ + + + G H
Sbjct: 333 DVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVH 392
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
+ + ++ ++LV M+AKCG L+ + VFD ++ +NLVSWN M+ GYAQ+G
Sbjct: 393 GYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVC 452
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
+AL +++ M+ + P+ T + +L C G + G + +S + +G+ P + S+
Sbjct: 453 KALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLG-KWIHSFVIRNGLRPCILVDTSL 511
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
V ++ G A P + V W ++ G H
Sbjct: 512 VDMYCKCGDLDIAQRCFNQMP-SHDLVSWSAIIVGYGYH 549
>gi|224106537|ref|XP_002314200.1| predicted protein [Populus trichocarpa]
gi|222850608|gb|EEE88155.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/620 (31%), Positives = 330/620 (53%), Gaps = 2/620 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N +L Y K I A+++F+ + E +V W+A+I G++Q G A+
Sbjct: 185 GMERNPFVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTA 244
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
LM + + YT++ + C+ GD G++IHG + RS LEL++ V N L++MY K
Sbjct: 245 SLMRRKGIFMDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNALMDMYFKN 304
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + S VF +R+ ++W ++ S+ Q + +F + + + + + +
Sbjct: 305 GGMKSGLVVFKKMHDRDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRPNHITFSILF 364
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C L NL +G+Q L L + + LIN++++C K+++A VF + ++
Sbjct: 365 RECGKLLNLDLGLQFCCLALHFGLFDEANITSALINMFSRCGKMEMAHLVFKSKVSENII 424
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+ LI GY EA+ F + G+ +E TFS VL + + + RQ+H +
Sbjct: 425 IWNELISGYKLNCCDAEALKTFYDLLQLGVEANEYTFSNVLETCSRSENQLMNRQIHGVA 484
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
K GF+S +V ++++ Y KC LL++SLK F+ +D D+ +W +I+ + EAI
Sbjct: 485 FKSGFASHGYVCSSLIKGYIKCGLLDDSLKVFNMLDRPDMAAWGTMISAFVHQGWDCEAI 544
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
L ++ G P+ + +IL+ + A K H I+K GF+ +V + SA++D Y
Sbjct: 545 RSLNLLIEAGEKPDEFILGSILSSCASTVAYCQTKSVHSLIIKLGFEGHVFVASAVLDAY 604
Query: 425 AKCGRLNDARKVFDH-LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
AKCG + A+ F+ S ++V +N M++ YA HG EAL+ Y M+ ++P+ TF
Sbjct: 605 AKCGDIQSAKMAFNQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMKLANLQPSQATF 664
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ V++AC HIG VE+G F SM +G+ P D +V +F+ G A + I+S P
Sbjct: 665 VSVIAACGHIGHVEKGCRLFKSM-DLYGMEPSPDIYGCLVDMFSRNGYLEDAKQIIESLP 723
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
+ R LLSGC+ + + LG +AA+K+L P + +AH +L VY+E W++ AK
Sbjct: 724 YPAWPAILRSLLSGCRMYGNRELGEWAAKKLLQLVPHNDAAHALLFKVYSELGNWEDAAK 783
Query: 604 VRKIMKEKSLKKDTGCSWTE 623
+R+ M E+ L+KD G SW E
Sbjct: 784 MRREMAERGLRKDPGHSWIE 803
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 238/491 (48%), Gaps = 1/491 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +V N+L+ Y K + + +FD M ERNV+SW+ ++ G Q E+
Sbjct: 79 IIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERNVVSWTLMVCGAIQCEEVELG 138
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARS-GKEIHGRMYRSGLELNSHVSNCLIN 119
L F M+ PN + + AC + + R G +H + G+E N VS +++
Sbjct: 139 LEVFLEMIRDGFVPNEFGLGSVMKACGNSVEGRVFGLCVHCFALKIGMERNPFVSCSVLS 198
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y K G + +A+ VF++ E + W +++ Y QCG + L R+ G+ + +++
Sbjct: 199 FYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRRKGIFMDKYT 258
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+V+ C++LG+ G QIH L+ + LE V L+++Y K + VF +
Sbjct: 259 FINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNALMDMYFKNGGMKSGLVVFKKMH 318
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ W+ + G ++Q + LF + + P+ +TFS + + G Q
Sbjct: 319 DRDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRPNHITFSILFRECGKLLNLDLGLQ 378
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
L + G + + +++ +S+C +E + F +++ WN LI+G+ +C
Sbjct: 379 FCCLALHFGLFDEANITSALINMFSRCGKMEMAHLVFKSKVSENIIIWNELISGYKLNCC 438
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA++ D+L G N YT+SN+L S +Q H K GF S+ + S+
Sbjct: 439 DAEALKTFYDLLQLGVEANEYTFSNVLETCSRSENQLMNRQIHGVAFKSGFASHGYVCSS 498
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+ Y KCG L+D+ KVF+ L ++ +W TM+ + G EA+ +++ E KP+
Sbjct: 499 LIKGYIKCGLLDDSLKVFNMLDRPDMAAWGTMISAFVHQGWDCEAIRSLNLLIEAGEKPD 558
Query: 480 DNTFIGVLSAC 490
+ +LS+C
Sbjct: 559 EFILGSILSSC 569
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 202/411 (49%), Gaps = 3/411 (0%)
Query: 82 AVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERN 141
A+S C + G +IHG + + G + VSN LI Y K +L VFD LERN
Sbjct: 59 ALSFCENSKSFILGTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERN 118
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC--AVLGNLKVGMQI 199
+SW ++ QC E GL++FL + G +EF SV+ AC +V G + G+ +
Sbjct: 119 VVSWTLMVCGAIQCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKACGNSVEGRV-FGLCV 177
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
H K +E + FV+ +++ YAK + A RVF +++ D+ W+A+IGGYAQ G
Sbjct: 178 HCFALKIGMERNPFVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYG 237
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
EAI M G+ + TF V+ + + + GRQ+H LII+ V N +
Sbjct: 238 FEAIVTASLMRRKGIFMDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNAL 297
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
+D Y K ++ L F +M + DVV+WN + + L L PN
Sbjct: 298 MDMYFKNGGMKSGLVVFKKMHDRDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRPNH 357
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
T+S + + ++ G Q C + G I SAL++M+++CG++ A VF
Sbjct: 358 ITFSILFRECGKLLNLDLGLQFCCLALHFGLFDEANITSALINMFSRCGKMEMAHLVFKS 417
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
S+N++ WN ++ GY + EAL+ + + + ++ N+ TF VL C
Sbjct: 418 KVSENIIIWNELISGYKLNCCDAEALKTFYDLLQLGVEANEYTFSNVLETC 468
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 193/392 (49%), Gaps = 10/392 (2%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
K VA+S+ L C + +G QIH + K D FV+ LI YAK L
Sbjct: 51 KDSVALSK-----ALSFCENSKSFILGTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLR 105
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
VF + ++ +W+ ++ G Q + +++F++M G +P+E V+ A
Sbjct: 106 YGFNVFDGMLERNVVSWTLMVCGAIQCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKACG 165
Query: 290 D-VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ V+ + G +H +K+G FV+ +VL FY+K + + + F+ ++E DV WN
Sbjct: 166 NSVEGRVFGLCVHCFALKIGMERNPFVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWN 225
Query: 349 ALIAGHLASCHYG-EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
A+I G+ A C YG EAI M +G + YT+ N++ S + +G+Q H I++
Sbjct: 226 AMIGGY-AQCGYGFEAIVTASLMRRKGIFMDKYTFINVIQGCSLLGDFNFGRQIHGLIIR 284
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
+ + + +AL+DMY K G + VF + +++V+WNT+ ++QH ++ +
Sbjct: 285 SELELSAPVMNALMDMYFKNGGMKSGLVVFKKMHDRDVVTWNTVFGSFSQHEDPKDIASL 344
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA 527
+ ++PN TF + C + ++ G F + G+ + ++++++F+
Sbjct: 345 FHSFLLTSMRPNHITFSILFRECGKLLNLDLGLQ-FCCLALHFGLFDEANITSALINMFS 403
Query: 528 CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK 559
G+ A+ K S + N ++W L+SG K
Sbjct: 404 RCGKMEMAHLVFK-SKVSENIIIWNELISGYK 434
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 124/248 (50%), Gaps = 4/248 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SGF + + L+ Y+K ++D+ K+F+ + ++ +W +IS F G A+
Sbjct: 487 SGFASHGYVCSSLIKGYIKCGLLDDSLKVFNMLDRPDMAAWGTMISAFVHQGWDCEAIRS 546
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
L++ +P+ + +S+CAS K +H + + G E + V++ +++ Y K
Sbjct: 547 LNLLIEAGEKPDEFILGSILSSCASTVAYCQTKSVHSLIIKLGFEGHVFVASAVLDAYAK 606
Query: 124 CGLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
CG + SA+ F+ S + + + + +++ +Y G V L + + + + S+ + S
Sbjct: 607 CGDIQSAKMAFNQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMKLANLQPSQATFVS 666
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
V+ AC +G+++ G ++ + +E + L++++++ L+ A ++ ++ P
Sbjct: 667 VIAACGHIGHVEKGCRLFKSMDLYGMEPSPDIYGCLVDMFSRNGYLEDAKQIIESLPYP- 725
Query: 243 LTAWSALI 250
AW A++
Sbjct: 726 --AWPAIL 731
>gi|218190567|gb|EEC72994.1| hypothetical protein OsI_06907 [Oryza sativa Indica Group]
Length = 711
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/671 (29%), Positives = 336/671 (50%), Gaps = 26/671 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G V + L+ +Y + S++ + +F MP +N +SW+A+ISGF+ E
Sbjct: 39 LVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPC 98
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ +PN T+ S C G+ +H R G HVSN L++M
Sbjct: 99 LHLFASMMLSSCKPNDITFATLFSVCTKHALLALGRSVHALQMRMGFHSYVHVSNALLSM 158
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHV---HGLKIFLLSRKSGVAISE 177
Y KCG + AQF+F ++ +SW +++ C ++V H L + + +
Sbjct: 159 YAKCGCIEEAQFIFGCIACKDLVSWNAIIFG---CSQYVLAKHCLDLLKEMERQHIVPDA 215
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALE------FDKFVAMGLINLYAKCEKLDLA 231
S VL +C ++ G FK +E D + M ++L + L+ A
Sbjct: 216 LSFLGVLSSCRHARLVEEGRH----CFKTMIEHGIKPGLDHYSCM--VDLLGRAGLLEEA 269
Query: 232 SRVFSNIQLP-DLTAWSALIG-----GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
+ + +P + W +L+G G +G L ++ + + +
Sbjct: 270 WDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGKGETSTDQSILAAAM 329
Query: 286 GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
+ AD + G QLH L++K+G S F+ ++++ YS+C LE S F M + V
Sbjct: 330 SSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTV 389
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
SW A+I+G + L M PN T++ + ++ ++ + GK H
Sbjct: 390 SWTAMISGFALHNRVEPCLHLFASMRLSSCKPNDITFATLFSVCTNHALLALGKSVHALQ 449
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
++ GF S V + +AL+ MYAKCG +++A+ +F ++ K+LVSWN M+ G +Q+GL + L
Sbjct: 450 MRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFIACKDLVSWNAMIFGCSQYGLAKHCL 509
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
++ M+ I P+ +F+GVLS+C H LVEEG H F +MI +HGI P +DH + +V L
Sbjct: 510 DLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMI-EHGIKPGLDHYSCMVDL 568
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
G A++ I++ I PN V+W LL C+ H ++ +G AAE L +P + H
Sbjct: 569 LGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGCAATH 628
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST-SRFAQFQGIDL 644
I L+N+YA W + A+VR MK + LK + GCSW E+ +K++ F+ +R Q ++
Sbjct: 629 IQLANLYATIGCWSDVARVRMAMKARGLKTNIGCSWIEVGDKVYSFTAENRSKSHQVNNV 688
Query: 645 HEVMNQLSVHL 655
+++ L H+
Sbjct: 689 LAILDCLQAHM 699
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 166/299 (55%), Gaps = 1/299 (0%)
Query: 281 FSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
+ + + AD + G QLH L++K+G S F+ ++++ YS+C LE S F M
Sbjct: 16 LAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMP 75
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
+ VSW A+I+G + L M+ PN T++ + ++ + + G+
Sbjct: 76 TKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATLFSVCTKHALLALGRS 135
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
H ++ GF S V + +AL+ MYAKCG + +A+ +F ++ K+LVSWN ++ G +Q+ L
Sbjct: 136 VHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQYVL 195
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
+ L++ M+ I P+ +F+GVLS+C H LVEEG H F +MI +HGI P +DH +
Sbjct: 196 AKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMI-EHGIKPGLDHYS 254
Query: 521 SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP 579
+V L G A++ I++ I PN V+W LL C+ H ++ +G AAE L +P
Sbjct: 255 CMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEP 313
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 218/489 (44%), Gaps = 12/489 (2%)
Query: 81 GAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
A+S+CA R G ++HG + + G + + + LI +Y +C L S+ VF +
Sbjct: 18 AAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMPTK 77
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
N++SW +++S + L +F S ++ + A++ C L +G +H
Sbjct: 78 NTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATLFSVCTKHALLALGRSVH 137
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
+L + V+ L+++YAKC ++ A +F I DL +W+A+I G +Q A
Sbjct: 138 ALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQYVLAK 197
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
+DL +M ++P ++F VL + + GR +I+ G + ++
Sbjct: 198 HCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDHYSCMV 257
Query: 321 DFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLKDML-FEGHCPN 378
D + LLEE+ M + V W +L+ + I+ + L E
Sbjct: 258 DLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGKGE 317
Query: 379 LYTYSNILNIS----SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
T +IL + +D G Q H +VK G DS V IGS+L+ +Y++C +L +
Sbjct: 318 TSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSY 377
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
VF + +KN VSW M+ G+A H L +++ M+ + KPND TF + S C +
Sbjct: 378 LVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMRLSSCKPNDITFATLFSVCTNHA 437
Query: 495 LVEEG--WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
L+ G H + H + + S+ C + + + FI + V W
Sbjct: 438 LLALGKSVHALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFIACKDL----VSWN 493
Query: 553 CLLSGCKTH 561
++ GC +
Sbjct: 494 AMIFGCSQY 502
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 201/437 (45%), Gaps = 22/437 (5%)
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
L RK + + A+ + +CA G Q+H L+ K + F+ LI LY++C
Sbjct: 3 LHRKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCS 62
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
+L+ + VF + + +W+A+I G+A + + LF M S P+++TF+ +
Sbjct: 63 QLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATLFS 122
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
GR +H+L ++MGF S+ V+N +L Y+KC +EE+ F + D+VS
Sbjct: 123 VCTKHALLALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVS 182
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI- 405
WNA+I G ++LLK+M + P+ ++ +L+ +E G+ HC
Sbjct: 183 WNAIIFGCSQYVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGR--HCFKT 240
Query: 406 -----VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+KPG D S +VD+ + G L +A + +S N V W ++L HG
Sbjct: 241 MIEHGIKPGLDHY----SCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHG 296
Query: 460 ---LGREALEIYSMMQENK--IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
+G +A E ++ K + + +S+C + +G +++ G
Sbjct: 297 NISIGIQAAEHRLKLEPGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKV-GCDS 355
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL--VLGRYAAE 572
+ +S++ L++ Q +Y ++ P + N V W ++SG H + L +A+
Sbjct: 356 TVFIGSSLITLYSRCSQLESSYLVFQTMPTK-NTVSWTAMISGFALHNRVEPCLHLFASM 414
Query: 573 KILSTDPEDTSAHIMLS 589
++ S P D + + S
Sbjct: 415 RLSSCKPNDITFATLFS 431
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/666 (27%), Positives = 356/666 (53%), Gaps = 59/666 (8%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N + N ++ Y K + ++A++LFD MP ++++SW+++++G+++ G + L +F M
Sbjct: 139 NPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMA 198
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
E + ++ V GD S E ++ N+ ++ + + G ++
Sbjct: 199 ----ERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNP----NTVSWVTMLCGFARFGKIA 250
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGAC 187
A+ +FD RN ++W +++++Y Q + +F+ + K+ + S +V+
Sbjct: 251 EARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSI-----SWTTVINGY 305
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAM-GLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
+G L Q+ + + + A +I+ Y + +++D A ++F+ I + D+ W
Sbjct: 306 VRMGKLDEARQLLN-----QMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCW 360
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ +I GY+Q G+ EA+ LF +M +K
Sbjct: 361 NTMIAGYSQCGRMDEALHLFKQM-----------------------------------VK 385
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
S+ NT++ Y++ ++ ++K F+EM E ++VSWN+LI+G + Y +A++
Sbjct: 386 KDIVSW----NTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKS 441
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M EG P+ T++ L+ + + A++ GKQ H ++K G+ +++ + +AL+ MYAK
Sbjct: 442 FMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAK 501
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG ++ A +F + ++VSWN+++ YA +G GREAL+++ M+ + P++ TF+G+
Sbjct: 502 CGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGI 561
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC H+GL+++G F M++ + I P +H A +V L G+ A++ ++ I
Sbjct: 562 LSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINA 621
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
N +W LL C+ H +L L ++AAEK+L +P TS +++LSN+ AEA WDE A+VR+
Sbjct: 622 NAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRR 681
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIY 666
+MKEK +K G SW ELQN++H F + A + ++L ++ L+ H+ + P +
Sbjct: 682 LMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSLTAHMRNTAKCPPYLR 741
Query: 667 SSHFEE 672
+ EE
Sbjct: 742 KTGSEE 747
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 191/418 (45%), Gaps = 60/418 (14%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ-----------IG 55
+PN +++ +L + +F +I +A++LFD+MP RNV++W+A+I+ + Q +
Sbjct: 230 NPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFME 289
Query: 56 MPE--------VALNYFRL----MVCCVLEPNYYTYVGAVSACAS-------RGDAR--- 93
MPE V Y R+ +L Y V A +A S DAR
Sbjct: 290 MPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIF 349
Query: 94 ---------------SGKEIHGRM------YRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+G GRM ++ ++ + N ++ Y + G + +A
Sbjct: 350 NQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIK 409
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
+F+ E+N +SW SL+S Q G ++ LK F+L G + + A L +CA L
Sbjct: 410 IFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAA 469
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L+VG Q+H LV K D FV+ LI +YAKC + A +F +I D+ +W++LI
Sbjct: 470 LQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAA 529
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM-GFSS 311
YA G EA+ LF KM G+ P EVTF +L A + V G +L +++
Sbjct: 530 YALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEP 589
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH-LASCHYGEAIELLK 368
++D + LEE+ + M ++ NA I G L +C +EL K
Sbjct: 590 LAEHYACMVDLLGRAGRLEEAFQLVRGMK----INANAGIWGALLGACRIHGNLELAK 643
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 153/348 (43%), Gaps = 44/348 (12%)
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
T N+++ ++K + ++ + FD M + ++VSWN++IA +L + EA +L M
Sbjct: 46 TVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKM-- 103
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
P YS L I+ E K + + P + N V +A+V YAK + ++
Sbjct: 104 ----PTRDLYSWTLMITCYTRNGELAKARNLFNLLP-YKWNPVCCNAMVAGYAKNRQFDE 158
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
AR++FD + +K+LVSWN+ML GY ++G R L+ + M E + ++ ++ V
Sbjct: 159 ARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVV----SWNLMVDGFVE 214
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL--FACRGQTRRAYEFIKSSPIEPNKVV 550
+G + W +F + P + ++ V L FA G+ A PI N V
Sbjct: 215 VGDLNSSWEFFEKI-------PNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIR-NVVA 266
Query: 551 WRCLLSG----CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
W +++ C + + L EK ++ + + N Y DE ++
Sbjct: 267 WNAMIAAYVQNCHVDEAISLFMEMPEK-------NSISWTTVINGYVRMGKLDEARQLLN 319
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
M +++ T +QNK + D ++ NQ+S+
Sbjct: 320 QMPYRNVAAQTAMISGYVQNK------------RMDDARQIFNQISIR 355
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/410 (20%), Positives = 187/410 (45%), Gaps = 39/410 (9%)
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
+I+ +AK ++ A ++F + ++ +W+++I Y + EA LF KM + L
Sbjct: 52 MISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDL--- 108
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
+++ ++ + E R L +L+ + N ++ Y+K +E+ + FD
Sbjct: 109 -YSWTLMITCYTRNGELAKARNLFNLL---PYKWNPVCCNAMVAGYAKNRQFDEARRLFD 164
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
M D+VSWN+++ G+ + ++ ++M ++ +++ +++ ++ +
Sbjct: 165 AMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAER----DVVSWNLMVDGFVEVGDLNS 220
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
+ I P N V ++ +A+ G++ +AR++FD + +N+V+WN M+ Y Q
Sbjct: 221 SWEFFEKIPNP----NTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQ 276
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
+ EA+ ++ M E N ++ V++ V +G ++E N M
Sbjct: 277 NCHVDEAISLFMEMPEK----NSISWTTVINGYVRMGKLDEARQLLNQM--------PYR 324
Query: 518 HIASVVHLFACRGQTRR---AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKI 574
++A+ + + Q +R A + I + V W +++G + + +++
Sbjct: 325 NVAAQTAMISGYVQNKRMDDARQIFNQISIR-DVVCWNTMIAGYSQCGRMDEALHLFKQM 383
Query: 575 LSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
+ D S + M+++ YA+ D K+ + MKEK++ SW L
Sbjct: 384 VKKDI--VSWNTMVAS-YAQVGQMDAAIKIFEEMKEKNI-----VSWNSL 425
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG+ ++ N L+ MY K I+ A+ LF ++ +V+SW++LI+ ++ G A
Sbjct: 480 VMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREA 539
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F M + P+ T+VG +SAC+ G G ++ M ++ +E + C+++
Sbjct: 540 LKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVD 599
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ G+ G L A Q V + N+ W +LL +
Sbjct: 600 LLGRAGRLEEAFQLVRGMKINANAGIWGALLGA 632
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%)
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
N V ++++ +AK GR++DAR++FD + +N+VSWN+M+ Y + EA +++ M
Sbjct: 45 NTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKM 103
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ K G++++A KVF H++ KN V+ N+M+ +A++G +A +++ M + I
Sbjct: 22 ITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIV--- 78
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC---RGQTRRAYE 537
++ +++A +H VEE F+ M P D + S + C G+ +A
Sbjct: 79 -SWNSMIAAYLHNDRVEEARQLFDKM-------PTRD-LYSWTLMITCYTRNGELAKARN 129
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD 578
P + N V +++G ++ R + + + D
Sbjct: 130 LFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKD 170
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/570 (32%), Positives = 308/570 (54%), Gaps = 33/570 (5%)
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
LS A +F+ E N + W ++ + + V LK+++ G+ + +S +L +
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN--------- 237
CA L G QIH V K + D +V LI++YA+ +L+ A +VF
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 238 ----------------------IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
I + D+ +W+A+I GY + EA++L+ M + +
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P E T V+ A A GRQLHS I GF S + N ++D YSKC +E +
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F + + DV+SWN LI GH Y EA+ L ++ML G PN T ++L + + AI
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314
Query: 396 EWGKQTHCCIVK--PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+ G+ H I K G + + ++L+DMYAKCG + A++VFD + +++L SWN M+
Sbjct: 315 DIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIF 374
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
G+A HG A +++S M++N I P+D TF+G+LSAC H G+++ G H F SM +D+ I+
Sbjct: 375 GFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKIT 434
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEK 573
P+++H ++ L G + A E I++ P+EP+ V+W LL CK H ++ LG A+
Sbjct: 435 PKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQN 494
Query: 574 ILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
++ +PE+ ++++LSN+YA A WD+ AK+R ++ +K +KK GCS E+ + +H F
Sbjct: 495 LIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFII 554
Query: 634 SRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ +++ ++ ++ + + + G+VPD
Sbjct: 555 GDKFHPRNREIYRMLEEMEMLMEETGFVPD 584
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 190/364 (52%), Gaps = 8/364 (2%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H +V++Y L+ Y IN+A+KLFDE+ ++V+SW+A+ISG+ + + AL ++
Sbjct: 128 HRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKD 187
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ ++P+ T V VSACA G G+++H + G N + N LI++Y KCG
Sbjct: 188 MMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGE 247
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ +A +F +++ ISW +L+ + + L +F +SG + ++ + SVL A
Sbjct: 248 VETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPA 307
Query: 187 CAVLGNLKVGMQIHSLVFK--CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
CA LG + +G IH + K + + LI++YAKC ++ A +VF ++ L+
Sbjct: 308 CAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLS 367
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL-HSL 303
+W+A+I G+A GKA A DLF KM +G+ P ++TF +L A + GR + S+
Sbjct: 368 SWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSM 427
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGE 362
+ ++D C L +E+ + M E D V W +L L +C
Sbjct: 428 SQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSL----LKACKMHN 483
Query: 363 AIEL 366
+EL
Sbjct: 484 NVEL 487
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 218/475 (45%), Gaps = 43/475 (9%)
Query: 23 FSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGA 82
F ++ A +F+ + E N++ W+ + G + AL + M+ L PN Y++
Sbjct: 12 FDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFL 71
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER-- 140
+ +CA G++IHG + + G +L+ +V+ LI+MY + G L A VFD S R
Sbjct: 72 LKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHV 131
Query: 141 -----------------------------NSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
+ +SW +++S Y + L+++ K+
Sbjct: 132 VSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT 191
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
V E + +V+ ACA G++++G Q+HS + + + LI+LY+KC +++ A
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+F + D+ +W+ LIGG+ + EA+ LF +M SG P++VT VL A A +
Sbjct: 252 CGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHL 311
Query: 292 KETIGGRQLHSLIIKM--GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
GR +H I K G ++ + + +++D Y+KC +E + + FD M + SWNA
Sbjct: 312 GAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNA 371
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI---- 405
+I G A +L M G P+ T+ +L+ S ++ G+ +
Sbjct: 372 MIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDY 431
Query: 406 -VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
+ P + ++D+ CG +A+++ + + V W ++L H
Sbjct: 432 KITPKLEHY----GCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMH 482
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 15/263 (5%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N+ N L+ +Y K + A LF + +++VISW+ LI G + + + + AL F
Sbjct: 227 GFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLF 286
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR--SGLELNSHVSNCLINMYG 122
+ M+ PN T + + ACA G G+ IH + + G+ S + LI+MY
Sbjct: 287 QEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYA 346
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG + +A+ VFD+ L R+ SW +++ + G+ +F RK+G+ + +
Sbjct: 347 KCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVG 406
Query: 183 VLGACAVLGNLKVGMQIH---SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+L AC+ G L +G I S +K + + + M I+L C A + +
Sbjct: 407 LLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCM--IDLLGHCGLFKEAKEMIRTMP 464
Query: 240 L-PDLTAWSALIGGYAQLGKACE 261
+ PD W +L+ KAC+
Sbjct: 465 MEPDGVIWCSLL-------KACK 480
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/626 (29%), Positives = 327/626 (52%), Gaps = 9/626 (1%)
Query: 45 SALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR 104
S L+S Q+G A++ + + + V + +CA G G+ IH + R
Sbjct: 7 STLLSKRQQLGQIAAAIDALQKRK----DADLKECVRVIQSCARLGALAEGRRIHQLIRR 62
Query: 105 SGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKI 164
GL + +VSN L+ MYGKCG L A+ VF+A+ +N SW L++ Q G L +
Sbjct: 63 VGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALAL 122
Query: 165 FLLSRKSGVAISEFSCASVLGACAVLGN-LKVGMQIHSLVFKCALEFDKFVAMGLINLYA 223
F K G+ S + + AC+ L G +H+L+ + + L+++Y+
Sbjct: 123 FYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYS 182
Query: 224 KCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSY 283
KC L+ + + F ++ + +W+A+I +A+ + EA+ KMF G+ VT+
Sbjct: 183 KCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYIT 242
Query: 284 VLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHD 343
++ A+ + R +H I++ GF V N +L+ Y KC L+++ F M + D
Sbjct: 243 LMSAYDQPSQLKSARYIHDCILRTGFDQD--VVNVILNMYGKCGCLQDAEAMFKSMSQPD 300
Query: 344 VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHC 403
V++WN +IA + H EA+ + M EG P+ YTY ++++ + + +E GKQ H
Sbjct: 301 VIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHR 360
Query: 404 CIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGRE 463
+ F + S LV+MY KCG L+ AR +FD ++K V+WN M+ YAQH ++
Sbjct: 361 RLGDRAFQVTELANS-LVNMYGKCGILDVARSIFDK-TAKGSVTWNAMIGAYAQHSHEQQ 418
Query: 464 ALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV 523
A E++ +M+ + +P+ TF+ VLSAC + GL EE YF M +DHG+ P H +V
Sbjct: 419 AFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMV 478
Query: 524 HLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTS 583
G+ A I+ P EP+ + W L+ C++H D+ G++AA+ + DPE ++
Sbjct: 479 ESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPEAST 538
Query: 584 AHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGID 643
++ L+ ++A+A + E +++RK+M ++ ++K+ G S +L ++ F+ + + +
Sbjct: 539 GYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKE 598
Query: 644 LHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ + + +L + GY PD + +H
Sbjct: 599 IFDELKRLDKEMKRAGYDPDMTHVAH 624
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 233/464 (50%), Gaps = 19/464 (4%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G +V NHL++MY K + +A+ +F+ P +NV SW+ LI+ +Q G + AL F
Sbjct: 64 GLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALF 123
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGD-ARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
M+ ++P+ ++ A++AC++ + +G+ +H + R G + + L++MY K
Sbjct: 124 YEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSK 183
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK---SGVAISEFSC 180
CG L + F++ E N++SW ++++++ EH GL+ +K G+ +
Sbjct: 184 CGSLEESVKTFESMTELNAVSWNAMIAAF---AEHRRGLEALRTLQKMFLEGIRACSVTY 240
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+++ A LK IH + + FD+ V ++N+Y KC L A +F ++
Sbjct: 241 ITLMSAYDQPSQLKSARYIHDCILRTG--FDQDVVNVILNMYGKCGCLQDAEAMFKSMSQ 298
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
PD+ AW+ +I Y+Q G EA+ + M G++P + T+ V+ A A + + G+Q+
Sbjct: 299 PDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQV 358
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + F T +AN++++ Y KC +L+ + FD+ + V+WNA+I + H
Sbjct: 359 HRRLGDRAF-QVTELANSLVNMYGKCGILDVARSIFDKTAKGS-VTWNAMIGAYAQHSHE 416
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA- 419
+A EL M +G P+ T+ ++L+ ++ E C+ + D V G
Sbjct: 417 QQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQ---DHGVRPGGGH 473
Query: 420 ---LVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+V+ K GRL+DA + + ++++W + L HG
Sbjct: 474 YGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHG 517
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 176/361 (48%), Gaps = 38/361 (10%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GF +V+ N +L MY K + DA+ +F M + +VI+W+ +I+ +SQ G A
Sbjct: 263 ILRTGFDQDVV--NVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEA 320
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L ++ LM + P+ YTYV + ACA+ GD GK++H R+ ++ + ++N L+NM
Sbjct: 321 LRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQV-TELANSLVNM 379
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG+L A+ +FD + + S++W +++ +Y Q ++FLL R G S +
Sbjct: 380 YGKCGILDVARSIFDKT-AKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITF 438
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG------LINLYAKCEKLDLASRV 234
SVL ACA N + + HS F C ++ D V G ++ K +L A +
Sbjct: 439 MSVLSACA---NAGLPEEAHSY-FVC-MQQDHGVRPGGGHYGCMVESLGKAGRLSDAEAL 493
Query: 235 FSNIQL-PDLTAWSALIG-----GYAQLGK-ACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ PD+ W++ + G + GK A + S+G V + +
Sbjct: 494 IQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTGY----VALARIHAD 549
Query: 288 FADVKETIGGRQLH----------SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
D +E R+L IIK+G S + F A + SK E+ +E LK D
Sbjct: 550 AGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSK-EIFDE-LKRLD 607
Query: 338 E 338
+
Sbjct: 608 K 608
>gi|302771700|ref|XP_002969268.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
gi|300162744|gb|EFJ29356.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
Length = 849
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 193/594 (32%), Positives = 314/594 (52%), Gaps = 13/594 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ + + + + N + M+ K ++ A+ +F M +V SW+A+++ +Q G A
Sbjct: 250 VVEAEWESDTMVANASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEA 309
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M V + T V A+S CA+ GK IH R+ R GLE + L+ M
Sbjct: 310 LELFRRMPSEV-AVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTM 368
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE-HVHGLKIFLLSRKSGVAISEFS 179
Y +CG L A+ VFD L +N +SW +++++Y + H L+IF L GV + +
Sbjct: 369 YSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTT 428
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+V+ A VG Q+H + L D F+ L+N+Y + L A RVF I
Sbjct: 429 ALNVVSAVECQ---SVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKII 485
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ AW+A++G G+ EA++ F +M G + TF L A + GR+
Sbjct: 486 ERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAVSP-DRVCYGRR 544
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG--HLAS 357
LH LI + G + VAN ++ Y++C+ LE++ TFD +++ +VSW ++IA L S
Sbjct: 545 LHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGS 604
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
C EAI+L + M E P+ T++ +L + + A GK H + G +SNV +
Sbjct: 605 CQ--EAIDLFQRMELE---PDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVA 659
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL+ M++K G L +AR++F+ + + L WN ML GYAQ G + ++ + MQ+ +
Sbjct: 660 TALIHMHSKFGNLGEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVA 719
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ TF+ V+SAC H GLVE+G F SM D+G+ ++ ++ L A GQ AY+
Sbjct: 720 PDHITFLAVVSACSHAGLVEKGARTFASMGTDYGVGHGLEDYGCLIDLLARAGQLEEAYD 779
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
F++ P P+ V W+ LL+ CK D+ G AA ++ +P +A + LSN+
Sbjct: 780 FLQGMPCGPSDVTWKTLLAACKIQGDVRRGSAAARSVIEREPYGAAAFVELSNM 833
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 159/562 (28%), Positives = 288/562 (51%), Gaps = 22/562 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +V+ N L+ M K ++ A + F MP R+VISW+ +++ +++ G A
Sbjct: 152 IIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGHIAEA 211
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
Y+ M+ + PN T++ ++AC+S AR + ++G + + E ++ V+N INM
Sbjct: 212 FGYYLRMLLEGVVPNNITFLAVLAACSS---ARDAELVYGNVVEAEWESDTMVANASINM 268
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ KCG L A+ VF + SW +++++ Q G L++F S VA+ + +
Sbjct: 269 FSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELF-RRMPSEVAVDKTTL 327
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
L CA +L+ G IHS V + LE D L+ +Y++C L A RVF I
Sbjct: 328 VIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDGILG 387
Query: 241 PDLTAWSALIGGYAQLGKA-CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+ +I Y + A+++F M G+ P+ T V+ A V+ G+Q
Sbjct: 388 KNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSA---VECQSVGKQ 444
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH I+ G S +F+ + +++ Y + L ++ + F+++ E DV +WNA++ +
Sbjct: 445 LHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQ 504
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP-AIEWGKQTHCCIVKPGFDSNVVIGS 418
EA+E ML EG N T+ +L +S+ P + +G++ H I + G +++ + +
Sbjct: 505 PREALEWFSRMLLEGASGNRATF--LLALSAVSPDRVCYGRRLHGLIAESGLEADNNVAN 562
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+ MYA+C L DAR FD L K++VSW +++ G +EA++++ M+ ++P
Sbjct: 563 ALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRME---LEP 619
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL---FACRGQTRRA 535
+ TF VL AC + EG +S R+ G+ + +++H+ F G+ RR
Sbjct: 620 DRVTFTTVLEACTIVSAHREG-KLVHSRARELGLESNVFVATALIHMHSKFGNLGEARRI 678
Query: 536 YEFIKSSPIEPNKVVWRCLLSG 557
+E +++ P W +L G
Sbjct: 679 FEAVEA----PTLACWNAMLGG 696
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/581 (28%), Positives = 278/581 (47%), Gaps = 62/581 (10%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGF-SQIGMPEVALNYFRLMVCCVLEPNYY 77
M++K I+DA ++F++M +R+++ W+++++ F + L +FR+ + VL P+
Sbjct: 72 MFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVL-PDRV 130
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T++ ++AC S G+ +H + LE + + N L+ M KC L A F
Sbjct: 131 TFISILNACESLA---QGELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRM 187
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
R+ ISW ++++Y + G +L GV + + +VL AC+ + ++
Sbjct: 188 PRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDAEL-- 245
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
++ V + E D VA IN+++KC LD A VF ++ D+ +W+A++ AQ G
Sbjct: 246 -VYGNVVEAEWESDTMVANASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHG 304
Query: 258 KACEAIDLFVKMFSSGLMPSEV-----TFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
+ EA++LF + MPSEV T L A + G+ +HS + ++G +
Sbjct: 305 FSSEALELFRR------MPSEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETD 358
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA--GHLASCHYGEAIELLKDM 370
++ YS+C L E+ + FD + +VVSWN +IA G S H A+E+ + M
Sbjct: 359 VVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLH-SRALEIFRLM 417
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
L +G P T + LN+ S + GKQ H IV G S+ IGSALV+MY + G L
Sbjct: 418 LLDGVRP---TRTTALNVVSAVECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSL 474
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
DAR+VF+ + +++ +WN ++ HG REALE +S M N TF+ LSA
Sbjct: 475 GDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAV 534
Query: 491 ----------VHIGLVEEGWHYFNSM-----------------------IRDHGISPRMD 517
+H + E G N++ + D I
Sbjct: 535 SPDRVCYGRRLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTS 594
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
IA+ V L +C + A + + +EP++V + +L C
Sbjct: 595 VIAACVDLGSC----QEAIDLFQRMELEPDRVTFTTVLEAC 631
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 240/493 (48%), Gaps = 23/493 (4%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
++ ++ V+ CA R ++ + G+ L+ ++ M+ KC + A VF
Sbjct: 27 DHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVF 86
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
+ L+R+ + W S+++++ + F + GV + S+L AC L
Sbjct: 87 EQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRVTFISILNACESLAQ-- 144
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G +H L+ LE D + L+ + AKC LD A+R F + D+ +W+ ++ YA
Sbjct: 145 -GELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYA 203
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
+ G EA +++M G++P+ +TF VL A + ++ ++ +++ + S T
Sbjct: 204 RNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARD---AELVYGNVVEAEWESDTM 260
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
VAN ++ +SKC L+ + F M DV SWNA++A EA+EL + M E
Sbjct: 261 VANASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSE- 319
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
+ T L+ + ++E GK H + + G +++VV G+ALV MY++CG L +AR
Sbjct: 320 VAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEAR 379
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQ-HGLGREALEIYSMMQENKIKPNDNTFIGVLSA--CV 491
+VFD + KN+VSWN M+ Y + L ALEI+ +M + ++P T + V+SA C
Sbjct: 380 RVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVECQ 439
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF---ACRGQTRRAYEFIKSSPIEPNK 548
+G GW + D I +++V+++ G RR +E I IE +
Sbjct: 440 SVGKQLHGWIVDTGLYSDSFIG------SALVNMYERTGSLGDARRVFEKI----IERDV 489
Query: 549 VVWRCLLSGCKTH 561
W ++ C H
Sbjct: 490 FAWNAIVGVCVGH 502
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 201/654 (30%), Positives = 338/654 (51%), Gaps = 24/654 (3%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P+++ +N + +++ + A +F+ MP R+ +S++A+ISG+ + +A N F M
Sbjct: 47 PDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM 106
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
L G V C GDAR R++ E + N L++ Y + G +
Sbjct: 107 PERDLFSWNVMLTGYVRNC-RLGDAR-------RLFDLMPEKDVVSWNSLLSGYAQNGYV 158
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A+ VFD E+NSISW LL++Y G L KS + ++C ++G
Sbjct: 159 DEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEA--CLLFESKSDWDLISWNC--LMGGF 214
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
K + +F D +I+ YA+ L A R+F D+ W+
Sbjct: 215 V----RKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWT 270
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A++ GY Q G EA F +M +EV+++ ++ + K+ R+L +
Sbjct: 271 AMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFESMPCR 326
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
SS+ NT++ Y + + ++ K FD M + D VSW A+IAG+ S HY EA+ +
Sbjct: 327 NISSW----NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMF 382
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
++ +G N T+ L+ +DI A+E GKQ H VK G+ + +G+AL+ MY KC
Sbjct: 383 VEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKC 442
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G +++A F+ + K++VSWNTML GYA+HG GR+AL ++ M+ +KP++ T +GVL
Sbjct: 443 GSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVL 502
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC H GL++ G YF SM +D+G+ P H ++ L G+ A + I++ P +P
Sbjct: 503 SACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPG 562
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
W LL + H + LG AAE + +P+++ +++LSN+YA + W + K+R
Sbjct: 563 AASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSK 622
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
M++ ++K G SW E+QNK+H FS + + ++ + +L + + + GYV
Sbjct: 623 MRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYV 676
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 38/240 (15%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G+ N LL MY K I++A F+ + E++V+SW+ +++G+++ G AL
Sbjct: 421 VKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQAL 480
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
F M ++P+ T VG +SAC+ G G E M + G+ S C+I++
Sbjct: 481 TVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDL 540
Query: 121 YGKCGLLSSAQ-FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
G+ G L AQ + + + + SW +L
Sbjct: 541 LGRAGRLEEAQDLIRNMPFQPGAASWGAL------------------------------- 569
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
LGA + GN ++G + +VFK + + L NLYA + A ++ S ++
Sbjct: 570 ----LGASRIHGNTELGEKAAEMVFKMEPQNSGMYVL-LSNLYAASGRWVDADKMRSKMR 624
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 221/678 (32%), Positives = 352/678 (51%), Gaps = 25/678 (3%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPEVALNYFR 65
P+ N LL Y + R+ A ++F + + + +S+++LIS + AL R
Sbjct: 94 PSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALR 153
Query: 66 LMVCCVLEPNYYTYVGAVSAC----ASRGDARSGKEIHGRMYRSGLELNSHVS---NCLI 118
M+ +T V + A A+ R G+E H ++GL L+ H N L+
Sbjct: 154 AMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGL-LHGHQRFAFNALL 212
Query: 119 NMYGKCGLLSSAQFVFDASL--ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+MY + GL++ AQ +F + + ++W +++S Q G ++ GV
Sbjct: 213 SMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPD 272
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKC-ALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ AS L AC+ L L VG ++H+ V K L + FVA L+++YA E++ A +VF
Sbjct: 273 GVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVF 332
Query: 236 SNIQLPD----LTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFAD 290
+ PD L W+A+I GYAQ G EA+ LF +M + +G +P E T + VL A A
Sbjct: 333 DMV--PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACAR 390
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ G +H ++K G + FV N ++D Y++ + + + F +D DVVSWN L
Sbjct: 391 SEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTL 450
Query: 351 IAGHLASCHYGEAIELLKDM--LFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
I G + H +A +L ++M L EG PN T +L + + A GK+ H V+
Sbjct: 451 ITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR 510
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
D++V +GSALVDMYAKCG L +R VFD L +N ++WN +++ Y HGLG EA +
Sbjct: 511 HALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVL 570
Query: 468 YS-MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
+ M + +PN+ TF+ L+AC H G+V+ G F++M RDHG+ P D +A VV +
Sbjct: 571 FDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDIL 630
Query: 527 ACRGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
G+ AY + S +V W +L C+ H+++ LG A E++L +PE+ S +
Sbjct: 631 GRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHY 690
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLH 645
++L N+Y+ A W A+VR M+ + + K+ GCSW E+ +H F A ++H
Sbjct: 691 VLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVH 750
Query: 646 EVMNQLSVHLFDGGYVPD 663
M L + GY PD
Sbjct: 751 AHMEALWGEMVARGYTPD 768
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 237/502 (47%), Gaps = 27/502 (5%)
Query: 82 AVSACASRGDARSGKEIHGRMYRSGL--ELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
A+ + A+ DARS + IH R GL + V+N L+ Y +CG L++A VF + +
Sbjct: 65 AIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISD 124
Query: 140 --RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC----AVLGNL 193
+++S+ SL+S+ C H L G ++ F+ SVL A A +
Sbjct: 125 SAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAV 184
Query: 194 KVGMQIHSLVFKCAL--EFDKFVAMGLINLYAKCEKLDLASRVFSNIQ--LPDLTAWSAL 249
++G + H+ K L +F L+++YA+ + A R+F+ D+ W+ +
Sbjct: 185 RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTM 244
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG- 308
+ Q G EA+ M + G+ P VTF+ L A + ++ GR++H+ +IK
Sbjct: 245 VSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDE 304
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDE--HDVVSWNALIAGHLASCHYGEAIEL 366
++ +FVA+ ++D Y+ E + ++ + FD + + + WNA+I G+ + EA+ L
Sbjct: 305 LAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRL 364
Query: 367 LKDMLFE-GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
M E G P T +++L + A + H +VK G N + +AL+DMYA
Sbjct: 365 FARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYA 424
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ---ENKIKPNDNT 482
+ G+ + AR++F + ++VSWNT++ G G +A ++ MQ E + PN T
Sbjct: 425 RLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAIT 484
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA---CRGQTRRAYEFI 539
+ +L C + G +R H + + +++V ++A C +R ++ +
Sbjct: 485 LMTLLPGCAILAAPARGKEIHGYAVR-HALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 543
Query: 540 KSSPIEPNKVVWRCLLSGCKTH 561
N + W L+ H
Sbjct: 544 PRR----NTITWNVLIMAYGMH 561
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 11/260 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G N N L+ MY + + + A+++F + +V+SW+ LI+G G A
Sbjct: 404 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 463
Query: 61 LNYFRLMVCCVLE-----PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
R M LE PN T + + CA GKEIHG R L+ + V +
Sbjct: 464 FQLAREMQ--QLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS 521
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA- 174
L++MY KCG L+ ++ VFD RN+I+W L+ +Y G +F SG A
Sbjct: 522 ALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEAR 581
Query: 175 ISEFSCASVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+E + + L AC+ G + G+Q+ H++ +E + ++++ + +LD A
Sbjct: 582 PNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYA 641
Query: 234 VFSNIQLPD--LTAWSALIG 251
+ ++++ + ++AWS ++G
Sbjct: 642 MVTSMETGEQQVSAWSTMLG 661
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 306/545 (56%), Gaps = 12/545 (2%)
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A+ +FD ERN ++W +L++ Y + GL++F+ + G S ++ + L AC
Sbjct: 92 ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLA 151
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
++ +G Q+H K E + L +LYAK LD A R F I ++ W+ +
Sbjct: 152 SCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTM 211
Query: 250 IGGYAQLGKACE-AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
I A+ + E + LF+ M G+MP+E T + V+ + G+Q+ + K+G
Sbjct: 212 ISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIG 271
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL-----------AS 357
+ V N+ + Y + +E+++ F++M++ +++WNA+I+G+ A
Sbjct: 272 CETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQAR 331
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+A+ + +D+ P+L+T+S+IL++ S + A+E G+Q H +K GF S+VV+
Sbjct: 332 SRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVN 391
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
SALV+MY KCG + DA K F + ++ V+W +M+ GY+QHG +EA++++ M+ ++
Sbjct: 392 SALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVR 451
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
PN+ TF+ +LSAC + GLVEE HYF+ M +++ I P +DH ++ +F G+ A+
Sbjct: 452 PNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFS 511
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FIK + EPN+ +W L++GC++H ++ L YAA+K+L P+ +I+L N+Y
Sbjct: 512 FIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTER 571
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
W + A+VRK+MK++ + SW +++K+++F + Q +L++++ L
Sbjct: 572 WQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKA 631
Query: 658 GGYVP 662
GY P
Sbjct: 632 IGYEP 636
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 231/463 (49%), Gaps = 28/463 (6%)
Query: 19 MYVKF--SRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNY 76
MYV DA++LFD MPERNV++W+AL++G++ P + L F M+ P++
Sbjct: 80 MYVPLLHRAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSH 139
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
YT ++AC + D GK++HG + G E + + N L ++Y K G L SA F
Sbjct: 140 YTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWR 199
Query: 137 SLERNSISWVSLLSSYCQCGEHVH-GLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
E+N I+W +++S+ + E V G+ +F+ GV +EF+ SV+ C +L +
Sbjct: 200 IPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNL 259
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G Q+ + FK E + V + LY + + D A R+F ++ + W+A+I GYAQ
Sbjct: 260 GKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQ 319
Query: 256 L-----------GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+ + +A+ +F + S + P TFS +L + + G Q+H+
Sbjct: 320 IMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQT 379
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK GF S V + +++ Y+KC ++++ K F EM V+W ++I+G+ EAI
Sbjct: 380 IKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAI 439
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-------KQTHCCIVKPGFDSNVVIG 417
+L ++M G PN T+ ++L+ S +E K+ +C ++P D
Sbjct: 440 QLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYC--IEPVVDHY---- 493
Query: 418 SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
++DM+ + GR+ DA N W++++ G HG
Sbjct: 494 GCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHG 536
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 144/286 (50%), Gaps = 12/286 (4%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGM-PEVALNYFRLMVCCVL 72
N L +Y K ++ A + F +PE+NVI+W+ +IS ++ E+ ++ F M+ +
Sbjct: 178 NSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGV 237
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
PN +T +S C +R D GK++ ++ G E N V N + +Y + G A
Sbjct: 238 MPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMR 297
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHV-----------HGLKIFLLSRKSGVAISEFSCA 181
+F+ + + I+W +++S Y Q + L IF ++S + F+ +
Sbjct: 298 LFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFS 357
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L C+ + L+ G QIH+ K D V L+N+Y KC + A++ F +
Sbjct: 358 SILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTR 417
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
W+++I GY+Q G+ EAI LF +M +G+ P+E+TF +L A
Sbjct: 418 TFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSA 463
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 129/270 (47%), Gaps = 31/270 (11%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV----- 59
G N+ N + +Y++ ++A +LF++M + ++I+W+A+ISG++QI M
Sbjct: 271 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQI-MDSAKDDLQ 329
Query: 60 -------ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH 112
AL FR + V++P+ +T+ +S C++ G++IH + +SG +
Sbjct: 330 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 389
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
V++ L+NMY KCG + A F R ++W S++S Y Q G+ +++F R +G
Sbjct: 390 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG 449
Query: 173 VAISEFSCASVLGACAVLG----------NLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
V +E + S+L AC+ G +K I +V D FV +G +
Sbjct: 450 VRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVE-- 507
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
D S + P+ WS+L+ G
Sbjct: 508 ------DAFSFIKRTGFEPNEAIWSSLVAG 531
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I SGF +V+ + L+ MY K I DA K F EMP R ++W+++ISG+SQ G P+ A+
Sbjct: 380 IKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAI 439
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
F M + PN T+V +SAC+ G + M + +E C+I+M
Sbjct: 440 QLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDM 499
Query: 121 YGKCGLLSSA-QFVFDASLERNSISWVSLLS 150
+ + G + A F+ E N W SL++
Sbjct: 500 FVRLGRVEDAFSFIKRTGFEPNEAIWSSLVA 530
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
DAR++FD + +N+V+W ++ GY + LE++ M E P+ T L+AC
Sbjct: 90 RDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC 149
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
+ V+ G I+ +G S+ L+A G A P E N +
Sbjct: 150 LASCDVDLGKQVHGYAIK-YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKNVIT 207
Query: 551 WRCLLSGCKTHKDLV 565
W ++S C ++ V
Sbjct: 208 WTTMISACAEDEECV 222
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 197/611 (32%), Positives = 321/611 (52%), Gaps = 44/611 (7%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSN-CLINMYGKCGL------LSSAQFVFDASLERNSISW 145
+S + IH +M ++GL H +N L + C L L A VFD E + W
Sbjct: 16 QSLRIIHAQMIKTGL----HNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIW 71
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
++ + + V LK+++ G+ + ++ +L +CA K G Q+H V K
Sbjct: 72 NTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLK 131
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRV------------------------------- 234
+ D ++ LI++Y + +L+ A +V
Sbjct: 132 FGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKM 191
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F I + D+ +W+A I GYA+ G EA++LF KM + + P E T VL A A
Sbjct: 192 FDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSI 251
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
GRQ+HS I GF + N ++D YSKC LE + F + DV+SWN LI G+
Sbjct: 252 ELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGY 311
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDS 412
Y EA+ L +DML G PN T +IL+ + + AI+ G+ H I K G +
Sbjct: 312 THMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTN 371
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+ ++L+DMYAKCG + A++VFD + +++L SWN M+ G+A HG A +I+S M+
Sbjct: 372 ASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMR 431
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+N I+P+D TF+G+LSAC H G+++ G H F SM RD+ + P+++H ++ L G
Sbjct: 432 KNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLF 491
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
+ A + I + +EP+ V+W LL CK H ++ LG A+ ++ +PE+ ++++LSN+Y
Sbjct: 492 KEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIY 551
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
A A W+E AK R ++ +K +KK GCS E+ + +H F + +++ ++ ++
Sbjct: 552 ATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEME 611
Query: 653 VHLFDGGYVPD 663
V L + G+VPD
Sbjct: 612 VLLEEAGFVPD 622
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 228/501 (45%), Gaps = 46/501 (9%)
Query: 1 MITSGFHPNVITYNHLL---LMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP 57
MI +G H + LL ++ F + A +FD + E ++ W+ + G + P
Sbjct: 25 MIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHALSSDP 84
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
AL + MV L PN YT+ + +CA + G+++HG++ + G +L+ ++ L
Sbjct: 85 VSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSL 144
Query: 118 INMYGKCGLLSSAQFVFDASLER-------------------------------NSISWV 146
I+MY + G L AQ V D S R + +SW
Sbjct: 145 ISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWN 204
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+ +S Y + G + L++F K+ V E + +VL ACA G++++G Q+HS +
Sbjct: 205 AXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDH 264
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
+ + LI+LY+KC +L+ A +F + D+ +W+ LIGGY + EA+ LF
Sbjct: 265 GFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLF 324
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM--GFSSFTFVANTVLDFYS 324
M SG P++VT +L A A + GR +H I K G ++ + + +++D Y+
Sbjct: 325 QDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 384
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
KC +E + + FD M + SWNA+I G A ++ M G P+ T+
Sbjct: 385 KCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVG 444
Query: 385 ILNISSDIPAIEWGKQTHCCIVK-----PGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
+L+ S ++ G+ + + P + ++D+ G +A K+ +
Sbjct: 445 LLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHY----GCMIDLXGHSGLFKEAEKMINT 500
Query: 440 LS-SKNLVSWNTMLVGYAQHG 459
+ + V W ++L HG
Sbjct: 501 MEMEPDGVIWCSLLKACKMHG 521
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 210/457 (45%), Gaps = 72/457 (15%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLIN---LYAKCEKLDLASRVFSNI 238
S+L C L +L++ IH+ + K L + L+ L + L A VF I
Sbjct: 7 SLLHXCKTLQSLRI---IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTI 63
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
Q P L W+ + G+A A+ L+V M S GL+P+ TF ++L + A G+
Sbjct: 64 QEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQ 123
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH---- 354
QLH ++K GF ++ +++ Y + LE++ K D+ DVVS+ ALI G+
Sbjct: 124 QLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRG 183
Query: 355 -LASCH--------------------------YGEAIELLKDMLFEGHCPNLYTYSNILN 387
+ S H Y EA+EL K M+ P+ T +L+
Sbjct: 184 XIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLS 243
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ +IE G+Q H I GF N+ I +AL+D+Y+KCG L A +F LS+K+++S
Sbjct: 244 ACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVIS 303
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG-WHYFNSM 506
WNT++ GY L +EAL ++ M + KPND T + +LSAC H+G ++ G W +
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYID 363
Query: 507 IRDHGISPRMDHIASVVHL-------------------------------FACRGQTRRA 535
R G++ S++ + FA G+ A
Sbjct: 364 KRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAA 423
Query: 536 YEF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRY 569
++ ++ + IEP+ + + LLS C L LGR+
Sbjct: 424 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRH 460
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 186/364 (51%), Gaps = 8/364 (2%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H +V++Y L+ Y I A K+FDE+P ++V+SW+A ISG+++ G + AL F+
Sbjct: 166 HRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKK 225
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ + P+ T V +SACA G G+++H + G N + N LI++Y KCG
Sbjct: 226 MMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGE 285
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L +A +F ++ ISW +L+ Y + L +F +SG ++ + S+L A
Sbjct: 286 LETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSA 345
Query: 187 CAVLGNLKVGMQIHSLVFK--CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
CA LG + +G IH + K + + LI++YAKC ++ A +VF ++ L+
Sbjct: 346 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL-HSL 303
+W+A+I G+A G+A A D+F +M +G+ P ++TF +L A + GR + S+
Sbjct: 406 SWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGE 362
++D L +E+ K + M+ E D V W +L L +C
Sbjct: 466 TRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSL----LKACKMHG 521
Query: 363 AIEL 366
+EL
Sbjct: 522 NVEL 525
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/657 (27%), Positives = 339/657 (51%), Gaps = 21/657 (3%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H N+ + N +L Y + AQ LF P RN +W+ ++ + G AL+ FR
Sbjct: 285 HKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRA 344
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ + P+ T ++ + +H + GL+ + V N L++ Y K GL
Sbjct: 345 MLGEGVIPDRVTVTTVLNLPGC-----TVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGL 399
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L++A+ VF +++++++ +++ + G H L++F R++G +
Sbjct: 400 LAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHL------ 453
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
+Q + + FV L++ Y+KC+ LD R+F + D ++
Sbjct: 454 ----------LQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSY 503
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ +I YA A + LF +M G + ++ +L + + G+Q+H+ ++
Sbjct: 504 NVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVL 563
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
+G +S + N ++D YSKC +L+ + F E +SW ALI G++ + + EA++L
Sbjct: 564 LGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQL 623
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
DM G P+ T+S+I+ SS + I G+Q H +++ G+ S+V GS LVDMYAK
Sbjct: 624 FSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAK 683
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG L++A + FD + +N +SWN ++ YA +G + A++++ M P+ TF+ V
Sbjct: 684 CGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSV 743
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L+AC H GL +E YF+ M + ISP +H A V+ G + + + P +
Sbjct: 744 LAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKA 803
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+ ++W +L C+ H + L R AA+K+ +P D + +++LSN+YA A W++ A V+K
Sbjct: 804 DPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKK 863
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
IM+++ ++K++G SW E++ K++ F+++ ++ + +++L + GY PD
Sbjct: 864 IMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPD 920
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 206/440 (46%), Gaps = 59/440 (13%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEM------PERNVISWSALISGFSQI 54
+ S H N T+ ++ + R +DA LF M P+R ++ + G +
Sbjct: 310 LFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVP 369
Query: 55 GMPEVALNY---FRLMVCCVL---------------------EPNYYTYVGAVSACASRG 90
+ A+ + + VC L + + TY + C+ G
Sbjct: 370 SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEG 429
Query: 91 DARSGKEIHGRMYRSGLE-------------------LNSHVSNCLINMYGKCGLLSSAQ 131
++ M R+G LN V+N L++ Y KC L +
Sbjct: 430 LHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMR 489
Query: 132 FVFDASLERNSISWVSLLSSYC--QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
+FD ER+++S+ ++++Y QC V L++F +K G A++L
Sbjct: 490 RLFDEMPERDNVSYNVIIAAYAWNQCAATV--LRLFREMQKLGFDRQVLPYATMLSVAGS 547
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
L ++ +G QIH+ + L + + LI++Y+KC LD A FSN +W+AL
Sbjct: 548 LPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTAL 607
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I GY Q G+ EA+ LF M +GL P TFS ++ A + + GRQLHS +I+ G+
Sbjct: 608 ITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGY 667
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE---AIEL 366
S F + ++D Y+KC L+E+L+TFDEM E + +SWNA+I+ A HYGE AI++
Sbjct: 668 KSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVIS---AYAHYGEAKNAIKM 724
Query: 367 LKDMLFEGHCPNLYTYSNIL 386
+ ML G P+ T+ ++L
Sbjct: 725 FEGMLHCGFNPDSVTFLSVL 744
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 217/488 (44%), Gaps = 67/488 (13%)
Query: 103 YRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGL 162
YR L L S +S+ G L A+ +FD +N S +LS+Y G+
Sbjct: 258 YRLNLGLRSLLSS---------GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQ 308
Query: 163 KIFLLSR------------------KSGVAISEFSCASVLGACAVLGNLKVGM------- 197
+FL S ++ A+S F ++LG + + V
Sbjct: 309 HLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFR--AMLGEGVIPDRVTVTTVLNLPGC 366
Query: 198 ---QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
+H K L+ FV L++ Y K L A RVF + D ++A++ G +
Sbjct: 367 TVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCS 426
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT- 313
+ G +A+ LF M +G LH L S T
Sbjct: 427 KEGLHTQALQLFAAMRRAGY---------------------SRHPLHLLQYSHSRSRSTS 465
Query: 314 ----FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
FV N++LDFYSKC+ L++ + FDEM E D VS+N +IA + + + L ++
Sbjct: 466 VLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFRE 525
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M G + Y+ +L+++ +P + GKQ H +V G S ++G+AL+DMY+KCG
Sbjct: 526 MQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGM 585
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L+ A+ F + S K+ +SW ++ GY Q+G EAL+++S M+ ++P+ TF ++ A
Sbjct: 586 LDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKA 645
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
+ ++ G + +IR G + + +V ++A G A P E N +
Sbjct: 646 SSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSI 703
Query: 550 VWRCLLSG 557
W ++S
Sbjct: 704 SWNAVISA 711
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG+ +V + + L+ MY K +++A + FDEMPERN ISW+A+IS ++ G + A
Sbjct: 662 LIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNA 721
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARS-GKEIHGRMYRSGLELNSHVSNCLIN 119
+ F M+ C P+ T++ ++AC+ G A K H ++ + C+I+
Sbjct: 722 IKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVID 781
Query: 120 MYGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
G+ G S Q + + + + I W S+L S
Sbjct: 782 TLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 814
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 221/678 (32%), Positives = 352/678 (51%), Gaps = 25/678 (3%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPEVALNYFR 65
P+ N LL Y + R+ A ++F + + + +S+++LIS + AL R
Sbjct: 92 PSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALR 151
Query: 66 LMVCCVLEPNYYTYVGAVSAC----ASRGDARSGKEIHGRMYRSGLELNSHVS---NCLI 118
M+ +T V + A A+ R G+E H ++GL L+ H N L+
Sbjct: 152 AMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGL-LHGHQRFAFNALL 210
Query: 119 NMYGKCGLLSSAQFVFDASL--ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+MY + GL++ AQ +F + + ++W +++S Q G ++ GV
Sbjct: 211 SMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPD 270
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKC-ALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ AS L AC+ L L VG ++H+ V K L + FVA L+++YA E++ A +VF
Sbjct: 271 GVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVF 330
Query: 236 SNIQLPD----LTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFAD 290
+ PD L W+A+I GYAQ G EA+ LF +M + +G +P E T + VL A A
Sbjct: 331 DMV--PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACAR 388
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ G +H ++K G + FV N ++D Y++ + + + F +D DVVSWN L
Sbjct: 389 SEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTL 448
Query: 351 IAGHLASCHYGEAIELLKDM--LFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
I G + H +A +L ++M L EG PN T +L + + A GK+ H V+
Sbjct: 449 ITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR 508
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
D++V +GSALVDMYAKCG L +R VFD L +N ++WN +++ Y HGLG EA +
Sbjct: 509 HALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVL 568
Query: 468 YS-MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
+ M + +PN+ TF+ L+AC H G+V+ G F++M RDHG+ P D +A VV +
Sbjct: 569 FDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDIL 628
Query: 527 ACRGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
G+ AY + S +V W +L C+ H+++ LG A E++L +PE+ S +
Sbjct: 629 GRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHY 688
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLH 645
++L N+Y+ A W A+VR M+ + + K+ GCSW E+ +H F A ++H
Sbjct: 689 VLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVH 748
Query: 646 EVMNQLSVHLFDGGYVPD 663
M L + GY PD
Sbjct: 749 AHMEALWGEMVARGYTPD 766
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 237/502 (47%), Gaps = 27/502 (5%)
Query: 82 AVSACASRGDARSGKEIHGRMYRSGL--ELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
A+ + A+ DARS + IH R GL + V+N L+ Y +CG L++A VF + +
Sbjct: 63 AIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISD 122
Query: 140 --RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC----AVLGNL 193
+++S+ SL+S+ C H L G ++ F+ SVL A A +
Sbjct: 123 SAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAV 182
Query: 194 KVGMQIHSLVFKCAL--EFDKFVAMGLINLYAKCEKLDLASRVFSNIQ--LPDLTAWSAL 249
++G + H+ K L +F L+++YA+ + A R+F+ D+ W+ +
Sbjct: 183 RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTM 242
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG- 308
+ Q G EA+ M + G+ P VTF+ L A + ++ GR++H+ +IK
Sbjct: 243 VSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDE 302
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDE--HDVVSWNALIAGHLASCHYGEAIEL 366
++ +FVA+ ++D Y+ E + ++ + FD + + + WNA+I G+ + EA+ L
Sbjct: 303 LAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRL 362
Query: 367 LKDMLFE-GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
M E G P T +++L + A + H +VK G N + +AL+DMYA
Sbjct: 363 FARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYA 422
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ---ENKIKPNDNT 482
+ G+ + AR++F + ++VSWNT++ G G +A ++ MQ E + PN T
Sbjct: 423 RLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAIT 482
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA---CRGQTRRAYEFI 539
+ +L C + G +R H + + +++V ++A C +R ++ +
Sbjct: 483 LMTLLPGCAILAAPARGKEIHGYAVR-HALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 541
Query: 540 KSSPIEPNKVVWRCLLSGCKTH 561
N + W L+ H
Sbjct: 542 PRR----NTITWNVLIMAYGMH 559
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 11/260 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G N N L+ MY + + + A+++F + +V+SW+ LI+G G A
Sbjct: 402 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 461
Query: 61 LNYFRLMVCCVLE-----PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
R M LE PN T + + CA GKEIHG R L+ + V +
Sbjct: 462 FQLAREMQ--QLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS 519
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA- 174
L++MY KCG L+ ++ VFD RN+I+W L+ +Y G +F SG A
Sbjct: 520 ALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEAR 579
Query: 175 ISEFSCASVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+E + + L AC+ G + G+Q+ H++ +E + ++++ + +LD A
Sbjct: 580 PNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYA 639
Query: 234 VFSNIQLPD--LTAWSALIG 251
+ ++++ + ++AWS ++G
Sbjct: 640 MVTSMETGEQQVSAWSTMLG 659
>gi|255559012|ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540371|gb|EEF41942.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 190/550 (34%), Positives = 305/550 (55%), Gaps = 15/550 (2%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
N Y VS CA G ++H + R G N H+ + +++MY KC + SA VF
Sbjct: 68 NPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVF 127
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
+ ERN ++W SL+ Y L + GV + FS ++ L C+ L
Sbjct: 128 NEMPERNDVTWNSLIFGY---------LNVMPTCAMRGV--TSFSVSTCLVVCSQLEVRN 176
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G Q+H L K + + FV LI++Y+KC+ +D + RVF + ++ W+A++ YA
Sbjct: 177 FGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYA 236
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q + EA+ L +M G+ + VT++ +L +F+ K +Q+H II+ G +
Sbjct: 237 QNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLY 296
Query: 315 VANTVLDFYSKC-ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE-AIELLKDMLF 372
+A T++ YSKC LE+ K + D +SWNA+IAG+ ++ GE A++ +M
Sbjct: 297 IAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGY-SNLGLGEDALKCFCEMRH 355
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+ YT++++L AIE G++ H IVK G+ S+V + + LV MYA+CG ++D
Sbjct: 356 ANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDD 415
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
+++VF + ++VSWN +L G A HG G EA+E++ M++ KIKPN TF+ VLSAC H
Sbjct: 416 SKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSH 475
Query: 493 IGLVEEGWHYFNSMIRDHGISP-RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
+G V++G YF+ M D + P R++H ASVV +F G A I P++P V+
Sbjct: 476 VGSVDKGLEYFDFMRSDISLEPLRVEHYASVVDIFGRAGYLSEAEAIINCMPMDPGPSVY 535
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
+ LLS C H + + +A K+L P+D + +I+LSN+ A WD+ A VRK+M ++
Sbjct: 536 KALLSACLVHGNREIAVRSARKLLELWPDDPATYILLSNMLATEGYWDDAADVRKLMCDR 595
Query: 612 SLKKDTGCSW 621
++K+ G SW
Sbjct: 596 GVRKNPGYSW 605
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 240/455 (52%), Gaps = 42/455 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF NV + ++ MY K S I A ++F+EMPERN ++W++LI G+ + MP A
Sbjct: 95 IIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVFNEMPERNDVTWNSLIFGYLNV-MPTCA 153
Query: 61 L---NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
+ F + C V+ C+ G ++HG + G + N V L
Sbjct: 154 MRGVTSFSVSTCLVV-------------CSQLEVRNFGAQVHGLSLKLGFDNNVFVGTAL 200
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
I+MY KC + + VFD +++N ++W +++++Y Q + + + + G+ +
Sbjct: 201 IDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANY 260
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC-EKLDLASRVFS 236
+ S+L + + ++ Q+H + +C LE + ++A L+ +Y+KC L+ +++ S
Sbjct: 261 VTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYIAATLVTVYSKCTNNLEDFNKISS 320
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+QL D +W+A+I GY+ LG +A+ F +M + + TF+ +LGA
Sbjct: 321 GVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEE 380
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
GR++H+LI+K G++S +V N ++ Y++C +++S + F M++HDVVSWNAL+ G
Sbjct: 381 GREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSWNALLTG--- 437
Query: 357 SCHYG---EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD-- 411
H+G EA+EL + M PN T+ +L+ S + +++ G + FD
Sbjct: 438 CAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSHVGSVDKGLEY--------FDFM 489
Query: 412 -SNVVIG-------SALVDMYAKCGRLNDARKVFD 438
S++ + +++VD++ + G L++A + +
Sbjct: 490 RSDISLEPLRVEHYASVVDIFGRAGYLSEAEAIIN 524
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 156/307 (50%), Gaps = 15/307 (4%)
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
DLF + +G + + V+ A G QLHS II+MGF+S + + V+D Y
Sbjct: 55 DLFAHLLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMY 114
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+KC ++ + + F+EM E + V+WN+LI G+L ++ G ++ S
Sbjct: 115 AKCSEIQSAHEVFNEMPERNDVTWNSLIFGYL---------NVMPTCAMRG--VTSFSVS 163
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
L + S + +G Q H +K GFD+NV +G+AL+DMY+KC ++D+ +VFD++ K
Sbjct: 164 TCLVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDK 223
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
N+V+W M+ YAQ+ EA+ + M IK N T+ +LS+ ++
Sbjct: 224 NVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVH 283
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
S+IR G+ + A++V +++ + I S +++ W +++G + +
Sbjct: 284 CSIIR-CGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAG---YSN 339
Query: 564 LVLGRYA 570
L LG A
Sbjct: 340 LGLGEDA 346
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 174/488 (35%), Positives = 284/488 (58%), Gaps = 7/488 (1%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ + ACA NL +IH+ + D F+ LI+LY KC + A +VF ++
Sbjct: 56 AFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNK 115
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL---GAFADVKETIGGR 298
D+ +W++LI GYAQ EAI L M P+ TF+ +L GA+AD IGG
Sbjct: 116 DMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYAD--SGIGG- 172
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+L +K + +V + +LD Y++C ++ + FD++D + VSWNALI+G
Sbjct: 173 QIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKG 232
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
A+ + +M G +TYS+I + + I A+E GK H ++K +G+
Sbjct: 233 DGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGN 292
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
++DMYAK G + DARKVF+ + +K+LV+WN+ML +AQ+GLG+EA+ + M+++ I
Sbjct: 293 TMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYL 352
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N +F+ +L+AC H GLV+EG HYF+ MI+++ + P ++H +VV L G A F
Sbjct: 353 NQISFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVF 411
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I P+EP VW LL+ C+ HK+ +G++AA+ + DP+D+ ++L N+YA W
Sbjct: 412 IFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHW 471
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
D A+VRK+MK +KK+ CSW E++N +H F + + +++++ +++S+ +
Sbjct: 472 DAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISMKIRKE 531
Query: 659 GYVPDPIY 666
GYVPD Y
Sbjct: 532 GYVPDMDY 539
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 7/391 (1%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L P Y ++ACA + ++IH + S ++ + N LI++Y KCG + A
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD ++ +SW SL++ Y Q + + K + F+ AS+L A
Sbjct: 107 KVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYA 166
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+ +G QIH+L KC D +V L+++YA+C K+D+A+ VF + + +W+ALI
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G+A+ G A+ +F +M +G + T+S + A A + G+ +H+ +IK
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKL 286
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---EAIELLK 368
FV NT+LD Y+K + ++ K F+ + D+V+WN+++ A YG EA+ +
Sbjct: 287 TAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLT---AFAQYGLGKEAVSHFE 343
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
+M G N ++ IL S ++ GK I + + + +VD+ + G
Sbjct: 344 EMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAG 403
Query: 429 RLNDARK-VFDHLSSKNLVSWNTMLVGYAQH 458
LN A +F W +L H
Sbjct: 404 LLNYALVFIFKMPMEPTAAVWGALLAACRMH 434
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 179/354 (50%), Gaps = 1/354 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +S F + N L+ +Y K + +A K+FD+M ++++SW++LI+G++Q MP A
Sbjct: 77 LASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEA 136
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M+ +PN +T+ + A + D+ G +IH + + +V + L++M
Sbjct: 137 IGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDM 196
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG + A VFD +N +SW +L+S + + G+ L +F +++G + F+
Sbjct: 197 YARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTY 256
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+ A A +G L+ G +H+ + K + FV ++++YAK + A +VF +
Sbjct: 257 SSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLN 316
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
DL W++++ +AQ G EA+ F +M SG+ ++++F +L A + G+
Sbjct: 317 KDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHY 376
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
+I + TV+D + LL +L +M E W AL+A
Sbjct: 377 FDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 150/294 (51%), Gaps = 16/294 (5%)
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
S L P+ + + A A K R++H+ + F+ F+ N+++ Y KC +
Sbjct: 44 SGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVV 103
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
E+ K FD+M D+VSW +LIAG+ + EAI LL ML PN +T++++L
Sbjct: 104 EAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVG 163
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
G Q H VK + +V +GSAL+DMYA+CG+++ A VFD L SKN VSWN
Sbjct: 164 AYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNA 223
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
++ G+A+ G G AL +++ MQ N + T+ + SA IG +E+G + H
Sbjct: 224 LISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQG-----KWVHAH 278
Query: 511 GISPRMDHIA----SVVHLFACRG---QTRRAYEFIKSSPIEPNKVVWRCLLSG 557
I R A +++ ++A G R+ +E + + + V W +L+
Sbjct: 279 MIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERV----LNKDLVTWNSMLTA 328
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 221/678 (32%), Positives = 352/678 (51%), Gaps = 25/678 (3%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPEVALNYFR 65
P+ N LL Y + R+ A ++F + + + +S+++LIS + AL R
Sbjct: 92 PSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALR 151
Query: 66 LMVCCVLEPNYYTYVGAVSAC----ASRGDARSGKEIHGRMYRSGLELNSHVS---NCLI 118
M+ +T V + A A+ R G+E H ++GL L+ H N L+
Sbjct: 152 AMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGL-LHGHQRFAFNALL 210
Query: 119 NMYGKCGLLSSAQFVFDASL--ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+MY + GL++ AQ +F + + ++W +++S Q G ++ GV
Sbjct: 211 SMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPD 270
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKC-ALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ AS L AC+ L L VG ++H+ V K L + FVA L+++YA E++ A +VF
Sbjct: 271 GVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVF 330
Query: 236 SNIQLPD----LTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFAD 290
+ PD L W+A+I GYAQ G EA+ LF +M + +G +P E T + VL A A
Sbjct: 331 DMV--PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACAR 388
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ G +H ++K G + FV N ++D Y++ + + + F +D DVVSWN L
Sbjct: 389 SEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTL 448
Query: 351 IAGHLASCHYGEAIELLKDM--LFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
I G + H +A +L ++M L EG PN T +L + + A GK+ H V+
Sbjct: 449 ITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR 508
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
D++V +GSALVDMYAKCG L +R VFD L +N ++WN +++ Y HGLG EA +
Sbjct: 509 HALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVL 568
Query: 468 YS-MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
+ M + +PN+ TF+ L+AC H G+V+ G F++M RDHG+ P D +A VV +
Sbjct: 569 FDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDIL 628
Query: 527 ACRGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
G+ AY + S +V W +L C+ H+++ LG A E++L +PE+ S +
Sbjct: 629 GRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHY 688
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLH 645
++L N+Y+ A W A+VR M+ + + K+ GCSW E+ +H F A ++H
Sbjct: 689 VLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVH 748
Query: 646 EVMNQLSVHLFDGGYVPD 663
M L + GY PD
Sbjct: 749 AHMEALWGEMVARGYTPD 766
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 237/502 (47%), Gaps = 27/502 (5%)
Query: 82 AVSACASRGDARSGKEIHGRMYRSGL--ELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
A+ + A+ DARS + IH R GL + V+N L+ Y +CG L++A VF + +
Sbjct: 63 AIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISD 122
Query: 140 --RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC----AVLGNL 193
+++S+ SL+S+ C H L G ++ F+ SVL A A +
Sbjct: 123 SAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAV 182
Query: 194 KVGMQIHSLVFKCAL--EFDKFVAMGLINLYAKCEKLDLASRVFSNIQ--LPDLTAWSAL 249
++G + H+ K L +F L+++YA+ + A R+F+ D+ W+ +
Sbjct: 183 RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTM 242
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG- 308
+ Q G EA+ M + G+ P VTF+ L A + ++ GR++H+ +IK
Sbjct: 243 VSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDE 302
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDE--HDVVSWNALIAGHLASCHYGEAIEL 366
++ +FVA+ ++D Y+ E + ++ + FD + + + WNA+I G+ + EA+ L
Sbjct: 303 LAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRL 362
Query: 367 LKDMLFE-GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
M E G P T +++L + A + H +VK G N + +AL+DMYA
Sbjct: 363 FARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYA 422
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ---ENKIKPNDNT 482
+ G+ + AR++F + ++VSWNT++ G G +A ++ MQ E + PN T
Sbjct: 423 RLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAIT 482
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA---CRGQTRRAYEFI 539
+ +L C + G +R H + + +++V ++A C +R ++ +
Sbjct: 483 LMTLLPGCAILAAPARGKEIHGYAVR-HALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 541
Query: 540 KSSPIEPNKVVWRCLLSGCKTH 561
N + W L+ H
Sbjct: 542 PRR----NTITWNVLIMAYGMH 559
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 11/260 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G N N L+ MY + + + A+++F + +V+SW+ LI+G G A
Sbjct: 402 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 461
Query: 61 LNYFRLMVCCVLE-----PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
R M LE PN T + + CA GKEIHG R L+ + V +
Sbjct: 462 FQLAREMQ--QLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS 519
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA- 174
L++MY KCG L+ ++ VFD RN+I+W L+ +Y G +F SG A
Sbjct: 520 ALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEAR 579
Query: 175 ISEFSCASVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+E + + L AC+ G + G+Q+ H++ +E + ++++ + +LD A
Sbjct: 580 PNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYA 639
Query: 234 VFSNIQLPD--LTAWSALIG 251
+ ++++ + ++AWS ++G
Sbjct: 640 MVTSMEAGEQQVSAWSTMLG 659
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 199/651 (30%), Positives = 335/651 (51%), Gaps = 55/651 (8%)
Query: 11 ITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC 70
++YN ++ Y++ S+ N A+ LFD+MPER++ SW+ +++G+ + C
Sbjct: 81 VSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVR---------------NC 125
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
L GDAR R++ E + N L++ Y + G + A
Sbjct: 126 RL-----------------GDAR-------RLFDLMPEKDVVSWNSLLSGYAQNGYVDEA 161
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
+ VFD E+NSISW LL++Y G +F KS + ++C ++G
Sbjct: 162 REVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF--ESKSDWDLISWNC--LMGGFV-- 215
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
K + +F D +I+ YA+ L A R+F D+ W+A++
Sbjct: 216 --RKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMV 273
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
GY Q G EA F +M +EV+++ ++ + K+ R+L + S
Sbjct: 274 SGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFESMPCRNIS 329
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S+ NT++ Y + + ++ K FD M + D VSW A+IAG+ S HY EA+ + ++
Sbjct: 330 SW----NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEI 385
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
+G N T+ L+ +DI A+E GKQ H VK G+ + +G+AL+ MY KCG +
Sbjct: 386 KQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSI 445
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
++A F+ + K++VSWNTML GYA+HG GR+AL ++ M+ +KP++ T +GVLSAC
Sbjct: 446 DEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSAC 505
Query: 491 VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV 550
H GL++ G YF SM +D+G+ P H ++ L G+ A + I++ P +P
Sbjct: 506 SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAAS 565
Query: 551 WRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
W LL + H + LG AAE + +P+++ +++LSN+YA + W + K+R M++
Sbjct: 566 WGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRD 625
Query: 611 KSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
++K G SW E+QNK+H FS + + ++ + +L + + + GYV
Sbjct: 626 IGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYV 676
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G+ N LL MY K I++A F+ + E++V+SW+ +++G+++ G AL
Sbjct: 421 VKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQAL 480
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
F M ++P+ T VG +SAC+ G G E M + G+ S C+I++
Sbjct: 481 TVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDL 540
Query: 121 YGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
G+ G L AQ + + + + SW +LL +
Sbjct: 541 LGRAGRLEEAQDLIRNMPFQPGAASWGALLGA 572
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 38/150 (25%)
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L ++ GL++ G YF M ++ ++P H ++ L G+ R E
Sbjct: 771 LLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLL---GRVDRLEE--------- 818
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
LL + H + LG AA+ P+++ +K+R
Sbjct: 819 -----GALLGASRIHGNTELGEKAAQMFFKMGPQNSG-----------------ISKMRD 856
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRF 636
+ ++K G SW E+QNK+H FS F
Sbjct: 857 V----GVQKVPGYSWFEVQNKIHTFSVGLF 882
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 183/574 (31%), Positives = 308/574 (53%), Gaps = 37/574 (6%)
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A VF+ E N + W ++L + + V L++++ G + +S +L +
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD----------------- 229
CA + G QIH+ V K D++V LI++YA+ L+
Sbjct: 74 CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSC 133
Query: 230 --------------LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
A +VF I D+ +W+A+I GY + G+ EA++LF +M + +
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKM----GFSSFTFVANTVLDFYSKCELLEE 331
P E T V+ A A GRQ+HS + GFSS + N ++D YSKC +E
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+ F+ + DVVSWN LI G+ + Y EA+ L ++ML G CPN T ++L +
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAH 313
Query: 392 IPAIEWGKQTHCCIVKP--GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
+ AI+ G+ H I K G + + ++L+DMYAKCG + A +VF+ + ++L SWN
Sbjct: 314 LGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWN 373
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
M+ G+A HG A +++S M+ N+++P+D TF+G+LSAC H GL++ G F SM +D
Sbjct: 374 AMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQD 433
Query: 510 HGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRY 569
+ ++P+++H ++ L G + A E I + P+EP+ V+W LL CK H +L L
Sbjct: 434 YNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAES 493
Query: 570 AAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMH 629
A+K++ +PE++ ++++LSN+YA A W++ A+VR ++ K +KK GCS E+ + +H
Sbjct: 494 FAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVH 553
Query: 630 YFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
F + +++ ++ ++ V L + G+ PD
Sbjct: 554 EFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPD 587
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 223/483 (46%), Gaps = 53/483 (10%)
Query: 23 FSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGA 82
F + A +F+ + E N++ W+ ++ G + P AL + MV PN Y++
Sbjct: 11 FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFL 70
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS----- 137
+ +CA G++IH ++ + G L+ +V LI+MY + G L A+ VFDAS
Sbjct: 71 LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130
Query: 138 --------------------------LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
ER+ +SW ++++ Y + G + L++F ++
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLV--------FKCALEFDKFVAMGLINLYA 223
V E + SV+ ACA G++++G Q+HS V F +L+ + LI+LY+
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLK----IVNALIDLYS 246
Query: 224 KCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSY 283
KC ++ A +F + D+ +W+ LIGGY EA+ LF +M SG P++VT
Sbjct: 247 KCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLS 306
Query: 284 VLGAFADVKETIGGRQLHSLIIK--MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
VL A A + GR +H I K G ++ T + +++D Y+KC +E + + F+ M
Sbjct: 307 VLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLY 366
Query: 342 HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
+ SWNA+I G A +L M P+ T+ +L+ S ++ G+Q
Sbjct: 367 RSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQI 426
Query: 402 HCCIVKPGFDSNVVIG----SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYA 456
+ + D N+ ++D+ G +A ++ + + V W ++L
Sbjct: 427 FKSMTQ---DYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACK 483
Query: 457 QHG 459
+HG
Sbjct: 484 KHG 486
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 163/300 (54%), Gaps = 6/300 (2%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H +V++ L+ Y A+K+FDE+ ER+V+SW+A+I+G+ + G E AL F+
Sbjct: 127 HRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKE 186
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS----GLELNSHVSNCLINMYG 122
M+ + P+ T V VSACA G G+++H + G + + N LI++Y
Sbjct: 187 MMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYS 246
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG + +A +F+ ++ +SW +L+ Y + L +F +SG ++ + S
Sbjct: 247 KCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLS 306
Query: 183 VLGACAVLGNLKVGMQIHSLVFK--CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
VL ACA LG + +G IH + K + + + LI++YAKC ++ A +VF+++
Sbjct: 307 VLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLY 366
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
L++W+A+I G+A G+A A DLF +M + + P ++TF +L A + GRQ+
Sbjct: 367 RSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQI 426
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 2/197 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF ++ N L+ +Y K + A LF+ + ++V+SW+ LI G++ + + AL F
Sbjct: 230 GFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLF 289
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR--SGLELNSHVSNCLINMYG 122
+ M+ PN T + + ACA G G+ IH + + G+ + + LI+MY
Sbjct: 290 QEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYA 349
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG + +A VF++ L R+ SW +++ + G +F R + V + +
Sbjct: 350 KCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVG 409
Query: 183 VLGACAVLGNLKVGMQI 199
+L AC+ G L +G QI
Sbjct: 410 LLSACSHSGLLDLGRQI 426
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY K I A ++F+ M R++ SW+A+I GF+ G A + F M +EP+
Sbjct: 344 LIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPD 403
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINMYGKCGLLSSA-QFV 133
T+VG +SAC+ G G++I M + L C+I++ G GL A + +
Sbjct: 404 DITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMI 463
Query: 134 FDASLERNSISWVSLLSSYCQCGEH 158
+E + + W SLL + C +H
Sbjct: 464 HTMPMEPDGVIWCSLLKA---CKKH 485
>gi|242077632|ref|XP_002448752.1| hypothetical protein SORBIDRAFT_06g032560 [Sorghum bicolor]
gi|241939935|gb|EES13080.1| hypothetical protein SORBIDRAFT_06g032560 [Sorghum bicolor]
Length = 686
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 211/626 (33%), Positives = 325/626 (51%), Gaps = 9/626 (1%)
Query: 15 HLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQI--GMPEVALNYFRLMVCCVL 72
LL +Y + S + DA L P +V+S++ ++S S+ P+ A FR + L
Sbjct: 27 ELLALYCRLSAVPDALALLRSTPCPSVVSYNTVLSALSRTLRHAPD-AFGLFRDLHSSGL 85
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P + + A S D R+G H + G + V L+ MY CG A
Sbjct: 86 RPTAPSLCAVLRAAGSLRDGRAGAAAHAQAAALGFLASDIVPTALLQMYYGCGSPRDANQ 145
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VFD + + ++W ++ + G L F +G+A +E + +SVL C G+
Sbjct: 146 VFDEMMTPDVVAWNCVMHCNVRYGYLDRALGKFCRMVSTGLAPTESTLSSVLSGCGHSGD 205
Query: 193 LKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
L G +H V K L+ D + L+++Y C LD A RVF I PDL +W+ +I
Sbjct: 206 LDHGRALHGWVVKSEELDPDLPLQNALLDMYCCCCDLDTAVRVFQRIGTPDLVSWNTIIA 265
Query: 252 GYAQLGKACEAIDLFVKM---FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
G++ +G A+ FV++ S L P E TF+ V+ A A + G+ LH+ +IK G
Sbjct: 266 GFSGVGDGWSAVQAFVQLKAVSSERLAPDEYTFASVVAAAAPLPAMCSGKPLHAGVIKAG 325
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
S FVANT+L+ Y E L + FD + DV+ W ++AGH A +++
Sbjct: 326 LESSVFVANTLLNMYFTNEDLGSAQILFDSVMVKDVIMWTEMVAGHSALGEGELSLKYFI 385
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
ML GH + ++ S+ LN ++D+ ++ G+ H +VK G++ N+ + +LVDMYAK G
Sbjct: 386 GMLQVGHKVDNFSLSSALNSTADLAGLKQGEMLHAQVVKSGYEGNICVSGSLVDMYAKNG 445
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
L A VF + +L WN+M+ GY HG A +++ M + ++P+ T+I +LS
Sbjct: 446 TLLGAYSVFCTIQKPDLKCWNSMIGGYGNHGDSEMAFKLFGDMIRSGLQPDHVTYISLLS 505
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN- 547
AC H GLVE+G Y+ MI D GI P H S+V L + G A + I SP
Sbjct: 506 ACSHCGLVEKGKLYWFCMIND-GIVPGFKHYTSMVSLLSRAGLLEEAVDLINKSPSAKRY 564
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
+WR LLS C T KDL +G +AAEK L DP+D S HI+LSN+YA WD +++R+
Sbjct: 565 PELWRILLSSCVTFKDLSIGVHAAEKALEQDPDDLSTHILLSNLYASIGKWDSVSEIRRR 624
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFST 633
++ ++K+ G SW E++ +H FS
Sbjct: 625 IRGLMIEKEPGLSWIEIKKMVHVFSA 650
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 209/433 (48%), Gaps = 4/433 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + I LL MY DA ++FDEM +V++W+ ++ + G + AL F
Sbjct: 119 GFLASDIVPTALLQMYYGCGSPRDANQVFDEMMTPDVVAWNCVMHCNVRYGYLDRALGKF 178
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINMYGK 123
MV L P T +S C GD G+ +HG + +S L+ + + N L++MY
Sbjct: 179 CRMVSTGLAPTESTLSSVLSGCGHSGDLDHGRALHGWVVKSEELDPDLPLQNALLDMYCC 238
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR---KSGVAISEFSC 180
C L +A VF + +SW ++++ + G+ ++ F+ + +A E++
Sbjct: 239 CCDLDTAVRVFQRIGTPDLVSWNTIIAGFSGVGDGWSAVQAFVQLKAVSSERLAPDEYTF 298
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASV+ A A L + G +H+ V K LE FVA L+N+Y E L A +F ++ +
Sbjct: 299 ASVVAAAAPLPAMCSGKPLHAGVIKAGLESSVFVANTLLNMYFTNEDLGSAQILFDSVMV 358
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+ ++ G++ LG+ ++ F+ M G + S L + AD+ G L
Sbjct: 359 KDVIMWTEMVAGHSALGEGELSLKYFIGMLQVGHKVDNFSLSSALNSTADLAGLKQGEML 418
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++K G+ V+ +++D Y+K L + F + + D+ WN++I G+
Sbjct: 419 HAQVVKSGYEGNICVSGSLVDMYAKNGTLLGAYSVFCTIQKPDLKCWNSMIGGYGNHGDS 478
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A +L DM+ G P+ TY ++L+ S +E GK C++ G +++
Sbjct: 479 EMAFKLFGDMIRSGLQPDHVTYISLLSACSHCGLVEKGKLYWFCMINDGIVPGFKHYTSM 538
Query: 421 VDMYAKCGRLNDA 433
V + ++ G L +A
Sbjct: 539 VSLLSRAGLLEEA 551
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G +V N LL MY + AQ LFD + ++VI W+ +++G S +G E++
Sbjct: 321 VIKAGLESSVFVANTLLNMYFTNEDLGSAQILFDSVMVKDVIMWTEMVAGHSALGEGELS 380
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L YF M+ + + ++ A+++ A + G+ +H ++ +SG E N VS L++M
Sbjct: 381 LKYFIGMLQVGHKVDNFSLSSALNSTADLAGLKQGEMLHAQVVKSGYEGNICVSGSLVDM 440
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A VF + + W S++ Y G+ K+F +SG+ +
Sbjct: 441 YAKNGTLLGAYSVFCTIQKPDLKCWNSMIGGYGNHGDSEMAFKLFGDMIRSGLQPDHVTY 500
Query: 181 ASVLGACAVLGNLKVG 196
S+L AC+ G ++ G
Sbjct: 501 ISLLSACSHCGLVEKG 516
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG+ N+ L+ MY K + A +F + + ++ W+++I G+ G E+A
Sbjct: 422 VVKSGYEGNICVSGSLVDMYAKNGTLLGAYSVFCTIQKPDLKCWNSMIGGYGNHGDSEMA 481
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M+ L+P++ TY+ +SAC+ G GK M G+ ++++
Sbjct: 482 FKLFGDMIRSGLQPDHVTYISLLSACSHCGLVEKGKLYWFCMINDGIVPGFKHYTSMVSL 541
Query: 121 YGKCGLLSSAQFVFD--ASLERNSISWVSLLSS 151
+ GLL A + + S +R W LLSS
Sbjct: 542 LSRAGLLEEAVDLINKSPSAKRYPELWRILLSS 574
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 303/552 (54%), Gaps = 6/552 (1%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL-LSSAQFVFDAS 137
Y + C G +IH + +SGLE + V N L+ +Y K G + VFD
Sbjct: 62 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 121
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
++ ISW S++S Y + G+ ++ L++F GV + F+ ++V+ AC+ LG+LK+G
Sbjct: 122 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR 181
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
H +V + + +A LI+++ + LD A ++F + PD W+++I +
Sbjct: 182 IFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRND 241
Query: 258 KACEAIDLFVKMFSS-GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
EA+ F M G+ P TF VL A ++ G+++H+ +I GF V
Sbjct: 242 FFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVE 301
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
++++D Y KC + ES + FD M + VSW+AL+ G+ + + I++ + M
Sbjct: 302 SSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EK 357
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
+LY + IL + + A+ GK+ HC ++ G +V++ SALVD+YAKCG + A+ +
Sbjct: 358 VDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTI 417
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
FD + +NL++WN+M+ G+AQ+G G EAL I++ M + IKP+ +FIG+L AC H GLV
Sbjct: 418 FDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLV 477
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+EG YF SM +D+GI ++H + +V L G A I++S + +W LL
Sbjct: 478 DEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLG 537
Query: 557 GCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
C T + + A++++ +P+ ++++L+NVY W++ ++R++MK++ + K
Sbjct: 538 ACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKM 597
Query: 617 TGCSWTELQNKM 628
G SW E +N +
Sbjct: 598 PGKSWIETKNNL 609
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 224/439 (51%), Gaps = 13/439 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKF-SRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV 59
+I SG + N LL +Y K + + +K+FD + ++VISW+++ISG+ ++G P
Sbjct: 85 VIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMN 144
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+L F M+ +EPN +T + AC+ GD + G+ HG + G + N +++ LI+
Sbjct: 145 SLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALID 204
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEF 178
M+G+ L A+ +FD LE ++I W S++S+ + L+ F + R G+ F
Sbjct: 205 MHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGF 264
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +VL AC LG LK G ++H+ V + V L+++Y KC + + R+F +
Sbjct: 265 TFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRM 324
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ + +WSAL+GGY Q G I +F KM L F +L A + G+
Sbjct: 325 PIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLY----CFGTILRTCAGLAAVRQGK 380
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H I+ G V + ++D Y+KC +E + FD+M ++++WN++I G +
Sbjct: 381 EVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNG 440
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG- 417
EA+ + M+ EG P+ ++ IL S ++ G++ + K D + +G
Sbjct: 441 RGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTK---DYGIKVGI 497
Query: 418 ---SALVDMYAKCGRLNDA 433
S +VD+ + G L +A
Sbjct: 498 EHYSCMVDLLGRAGLLEEA 516
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 211/407 (51%), Gaps = 8/407 (1%)
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
C+ GE L++ ++ AS+L C + G+QIH+ V K LEFD+
Sbjct: 35 CKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDR 94
Query: 213 FVAMGLINLYAKC-EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
FV L+ LY K +VF + + D+ +W+++I GY ++GK +++LF KM +
Sbjct: 95 FVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLA 154
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
G+ P+ T S V+ A +++ + GR H +++ GF S +A+ ++D + + L++
Sbjct: 155 YGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDD 214
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE-GHCPNLYTYSNILNISS 390
+ + FDE+ E D + W ++I+ + + EA+ M + G CP+ +T+ +L
Sbjct: 215 ARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACG 274
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
++ ++ GK+ H ++ GF NVV+ S+LVDMY KCG + +++++FD + KN VSW+
Sbjct: 275 NLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSA 334
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
+L GY Q+G + ++I+ M+ K + F +L C + V +G IR
Sbjct: 335 LLGGYCQNGDFKSVIQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKG 390
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G + +++V L+A G A P+ N + W ++ G
Sbjct: 391 GWRDVIVE-SALVDLYAKCGCIEYAQTIFDQMPVR-NLITWNSMIGG 435
>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
Length = 1096
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 199/662 (30%), Positives = 343/662 (51%), Gaps = 22/662 (3%)
Query: 20 YVKFSRINDAQKLFDEM-PERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
+ K + A+ +F+ + RNV+SW+ +I ++Q G A + ++ M C EPN T
Sbjct: 374 FAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDC---EPNAVT 430
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
++ + +C D ++IH M SG E + + CL+ MYGKCG + SA +F+
Sbjct: 431 FMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLK 490
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
ER+ ++W S+LS++ G + LK++ G + + +VL AC + +
Sbjct: 491 ERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEARR--- 547
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD-LTAWSALIGGYAQLG 257
++ F+ LE D ++ YA+C L A F IQ + W+A+I G AQ G
Sbjct: 548 -YAATFE--LELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHG 604
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
++ +A++ F KM G+ + VT+ L A + +K+ GRQLH+ I+ ++N
Sbjct: 605 ESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARILLENIHEAN-LSN 663
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
V++ Y KC L+E++ F +M E DV+SWN +IA + +A+E K M EG P
Sbjct: 664 AVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTP 723
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSNVVIGSALVDMYAKCGRLNDARK 435
+ TY ++ +P++ GK H + P + + + +ALV MYA+CG L+DA+
Sbjct: 724 DRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKS 783
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
VF S+NLV+W+ ++ AQHG EAL+++ MQ KP+ TF +++AC G+
Sbjct: 784 VFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGV 843
Query: 496 VEEGWHY-FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
V++G F+++ R + +S +H +V + G+ A I+ P + + +W L
Sbjct: 844 VKDGGRRIFDALGRVYPVSASAEHYGCMVEVLGRAGKLEEAEGLIQGMPRKASGAIWMAL 903
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI-MLSNVYAEANMWDETAKVRKIMKEKSL 613
L+ C DL G AA + DP +A + ML+ +Y A W++ A+VRK ++ ++
Sbjct: 904 LAACNRRGDLERGIRAANRAQQLDPGSFAASMAMLAELYGAAGRWEDAARVRKAVESRNA 963
Query: 614 KKDTGC-SWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL----SVHLFDGGYVPDPIYSS 668
+++ G SW E+ N++H F + QG L ++ +L S+ + +GG D +
Sbjct: 964 RREPGGRSWIEVNNRVHEFGEDD-DRLQGPRLDKIRGELQRLSSLAVEEGGICKDENARA 1022
Query: 669 HF 670
H
Sbjct: 1023 HI 1024
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 168/571 (29%), Positives = 287/571 (50%), Gaps = 25/571 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+++SG N NHL+ MY K + DA ++F+ +P NV SW+ALI+ +++ G
Sbjct: 52 ILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREV 111
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +FR M +P+ + + ++AC+S G GK IH + +G+E V N ++N+
Sbjct: 112 LGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQV-VGNAIVNL 170
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFS 179
YGKCG + A+ VF+ ERN +SW +L+++ Q G +++F L+ V ++ +
Sbjct: 171 YGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDAT 230
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV+ AC+ L +L G H + + + FV L+N+Y KC +D A VF ++
Sbjct: 231 FVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMR 290
Query: 240 LPDLTA---WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
L D+ + W+ +I +A G EA LF KM G++P++VTF VL A + +
Sbjct: 291 LRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQC-- 348
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHL 355
++ + + +G T + + ++K L + F+ + +VVSW +I +
Sbjct: 349 -EKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYA 407
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI---SSDIPAIEWGKQTHCCIVKPGFDS 412
A +L K M E PN T+ +++ D+P E Q H +V GF+S
Sbjct: 408 QQGFIRAAFDLYKRMDCE---PNAVTFMAVMDSCLRPEDLPRAE---QIHAHMVASGFES 461
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+VV+ LV MY KCG ++ A +F++L +++V+WN+ML +A +G +L++Y M
Sbjct: 462 DVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERML 521
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
KP+ T++ VL AC V E Y + + I+ R + V +A G
Sbjct: 522 LEGTKPDKITYLAVLDACQS---VSEARRYAATFELELDIAAR----NAAVSAYARCGSL 574
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+ A + + N V W ++SG H +
Sbjct: 575 KEAKAAFDAIQWKNNAVTWNAMISGLAQHGE 605
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 156/547 (28%), Positives = 254/547 (46%), Gaps = 53/547 (9%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L+P Y + + CA + A +GK +H + SG +N ++ N LI MY KCG L A
Sbjct: 24 LQPARYASL--LQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAV 81
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VF+ N SW +L+++Y + G L F + G F ++VL AC+ G
Sbjct: 82 EVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAG 141
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
L G IH V +E + V ++NLY KC ++ A VF + +L +W+ALI
Sbjct: 142 ALNEGKAIHDCVVLAGME-TQVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIA 200
Query: 252 GYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
AQ G +A+ +F M G + P++ TF V+ A +++ + G+ H II+ GF
Sbjct: 201 ANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFD 260
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV---SWNALIAGHLASCHYGEAIELL 367
S+ FV N++++ Y KC ++ + F++M DV+ SW +IA + H EA L
Sbjct: 261 SYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLF 320
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M EG PN T+ +L + + E + + G + + +G+A V +AK
Sbjct: 321 YKMDLEGVLPNKVTFVTVLRACTTLAQCE---KIFARVKHLGLELDTTLGTAFVSTFAKL 377
Query: 428 GRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
G L AR VF++L SS+N+VSW M+ YAQ G R A ++Y M +PN TF+ V
Sbjct: 378 GDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMD---CEPNAVTFMAV 434
Query: 487 LSACVH-----------------------------------IGLVEEGWHYFNSMIRDHG 511
+ +C+ G V+ W F ++
Sbjct: 435 MDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSV 494
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA 571
++ + + S C ++ + YE + +P+K+ + +L C++ + RYAA
Sbjct: 495 VA--WNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEAR--RYAA 550
Query: 572 EKILSTD 578
L D
Sbjct: 551 TFELELD 557
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 228/478 (47%), Gaps = 34/478 (7%)
Query: 169 RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
+KS ++ AS+L CA + G +H + ++++ LI +YAKC L
Sbjct: 18 KKSSESLQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCL 77
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
A VF + P++ +W+ALI YA+ G E + F KM G P FS VL A
Sbjct: 78 QDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTAC 137
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ G+ +H ++ G + V N +++ Y KC + E+ F+ + E ++VSWN
Sbjct: 138 SSAGALNEGKAIHDCVVLAGMET-QVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWN 196
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
ALIA + + H +A+++ + M +G PN T+ ++++ S++ + GK TH I++
Sbjct: 197 ALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIR 256
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV---SWNTMLVGYAQHGLGREA 464
GFDS + +G++LV+MY KCG ++ AR VF+ + ++++ SW ++ +A +G EA
Sbjct: 257 TGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEA 316
Query: 465 LEIYSMMQENKIKPNDNTFIGVLSACV-------------HIGL---VEEGWHYFNSMIR 508
++ M + PN TF+ VL AC H+GL G + ++ +
Sbjct: 317 FVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCEKIFARVKHLGLELDTTLGTAFVSTFAK 376
Query: 509 ------------DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+ G S + ++ +A +G R A++ K EPN V + ++
Sbjct: 377 LGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCEPNAVTFMAVMD 436
Query: 557 GCKTHKDLVLG-RYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
C +DL + A + S D + L +Y + D + + +KE+S+
Sbjct: 437 SCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSV 494
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N ++ MY K +++A F +MPER+VISW+ +I+ ++Q G AL +F+ M
Sbjct: 663 NAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWT 722
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSG--LELNSHVSNCLINMYGKCGLLSSAQ 131
P+ TY+GA+ AC S GK IH + + LE + V+ L+ MY +CG L A+
Sbjct: 723 PDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAK 782
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VF S RN ++W +L+++ Q G L +F + G + ++++ AC+ G
Sbjct: 783 SVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRG 842
Query: 192 NLKVG 196
+K G
Sbjct: 843 VVKDG 847
>gi|359359135|gb|AEV41041.1| putative pentatricopeptide [Oryza minuta]
Length = 724
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 209/641 (32%), Positives = 332/641 (51%), Gaps = 12/641 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG--MPEVALNYFRLMVCCV 71
N LL +Y + S I DA L +V+S++ ++S S+ PE FR +
Sbjct: 63 NQLLSLYARLSAIPDALALLRSTLRPSVVSYNTVLSALSRAPRHAPE-GFRLFRRLHASG 121
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L P + + A D R+G H + G + V L+ MY +CG A
Sbjct: 122 LRPTAPSLCALLRAAGELHDRRAGAAAHSQAATLGFLASDIVPTALLQMYSQCGAPGDAN 181
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD R+ ++W ++ + G L F + G+ +E + +SVL C G
Sbjct: 182 QVFDEMATRDGVAWNCVMHCNVRYGYLDRALGQFCRMVRGGLPPTESTLSSVLSGCGRAG 241
Query: 192 NLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
+ + G +H V K L+ D + L+++Y+ C L+ A VF I+ PDL +W+ LI
Sbjct: 242 DRRRGRVLHGWVVKLEELDPDMPLQNALLDMYSSCGDLETALCVFERIETPDLVSWNTLI 301
Query: 251 GGYAQLGKACEAIDLFVKM----FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
G++ +G A+ FV++ F ++P E T + V+ A A + GG+ LH+ +IK
Sbjct: 302 AGFSGVGNGFSAMHAFVQLKAVQFDERVVPDEYTLAAVVSACATLPAMFGGKPLHAEVIK 361
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE-AIE 365
G S FV NT+L+ Y E + FD + + DV+ W ++AGH +S GE A+
Sbjct: 362 AGLESSVFVGNTLLNMYFTNEEPGSARILFDSLTQKDVIMWTEMVAGH-SSLGEGELALR 420
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
ML EG+ + ++ S+ LN ++++ ++ G+ H +VK G++ N+ +LVDMYA
Sbjct: 421 YFVSMLQEGYSVDSFSLSSALNSTAELAGLKQGEMLHAQVVKSGYEGNICASGSLVDMYA 480
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
K G L A VF ++ +L WN+++ GY HG A +++ M + ++P+ T+I
Sbjct: 481 KNGALPGAYLVFCNIQKPDLKCWNSLIGGYGNHGNSEMAFKLFGEMIRDGLQPDHVTYIS 540
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
+LSAC H GLVE+G Y+ M+ D GI P H S+V L + G A + + SP
Sbjct: 541 LLSACSHCGLVEKGKFYWFCMMTD-GIMPGFKHYTSMVSLLSRAGLLDEAVDLMMKSPFT 599
Query: 546 PN-KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+WR LLS C T ++L +G +AAE++L DP+D S HI+LSN+YA WD A++
Sbjct: 600 KKCPELWRILLSSCITFRNLSIGVHAAEQVLEQDPDDISTHILLSNLYASLGKWDVVAEI 659
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLH 645
RK M+ ++K+ G SW E++N +H FS Q D H
Sbjct: 660 RKKMRGLMVEKEPGLSWVEMKNVVHVFSADDECHSQIDDCH 700
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 211/436 (48%), Gaps = 5/436 (1%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
T GF + I LL MY + DA ++FDEM R+ ++W+ ++ + G + AL
Sbjct: 154 TLGFLASDIVPTALLQMYSQCGAPGDANQVFDEMATRDGVAWNCVMHCNVRYGYLDRALG 213
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLINMY 121
F MV L P T +S C GD R G+ +HG + + L+ + + N L++MY
Sbjct: 214 QFCRMVRGGLPPTESTLSSVLSGCGRAGDRRRGRVLHGWVVKLEELDPDMPLQNALLDMY 273
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL----LSRKSGVAISE 177
CG L +A VF+ + +SW +L++ + G + F+ + V E
Sbjct: 274 SSCGDLETALCVFERIETPDLVSWNTLIAGFSGVGNGFSAMHAFVQLKAVQFDERVVPDE 333
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
++ A+V+ ACA L + G +H+ V K LE FV L+N+Y E+ A +F +
Sbjct: 334 YTLAAVVSACATLPAMFGGKPLHAEVIKAGLESSVFVGNTLLNMYFTNEEPGSARILFDS 393
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ D+ W+ ++ G++ LG+ A+ FV M G + S L + A++ G
Sbjct: 394 LTQKDVIMWTEMVAGHSSLGEGELALRYFVSMLQEGYSVDSFSLSSALNSTAELAGLKQG 453
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
LH+ ++K G+ + +++D Y+K L + F + + D+ WN+LI G+
Sbjct: 454 EMLHAQVVKSGYEGNICASGSLVDMYAKNGALPGAYLVFCNIQKPDLKCWNSLIGGYGNH 513
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+ A +L +M+ +G P+ TY ++L+ S +E GK C++ G
Sbjct: 514 GNSEMAFKLFGEMIRDGLQPDHVTYISLLSACSHCGLVEKGKFYWFCMMTDGIMPGFKHY 573
Query: 418 SALVDMYAKCGRLNDA 433
+++V + ++ G L++A
Sbjct: 574 TSMVSLLSRAGLLDEA 589
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G +V N LL MY A+ LFD + +++VI W+ +++G S +G E+A
Sbjct: 359 VIKAGLESSVFVGNTLLNMYFTNEEPGSARILFDSLTQKDVIMWTEMVAGHSSLGEGELA 418
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L YF M+ + ++ A+++ A + G+ +H ++ +SG E N S L++M
Sbjct: 419 LRYFVSMLQEGYSVDSFSLSSALNSTAELAGLKQGEMLHAQVVKSGYEGNICASGSLVDM 478
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A VF + + W SL+ Y G K+F + G+ +
Sbjct: 479 YAKNGALPGAYLVFCNIQKPDLKCWNSLIGGYGNHGNSEMAFKLFGEMIRDGLQPDHVTY 538
Query: 181 ASVLGACAVLGNLKVG 196
S+L AC+ G ++ G
Sbjct: 539 ISLLSACSHCGLVEKG 554
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG+ N+ L+ MY K + A +F + + ++ W++LI G+ G E+A
Sbjct: 460 VVKSGYEGNICASGSLVDMYAKNGALPGAYLVFCNIQKPDLKCWNSLIGGYGNHGNSEMA 519
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M+ L+P++ TY+ +SAC+ G GK M G+ ++++
Sbjct: 520 FKLFGEMIRDGLQPDHVTYISLLSACSHCGLVEKGKFYWFCMMTDGIMPGFKHYTSMVSL 579
Query: 121 YGKCGLLSSA 130
+ GLL A
Sbjct: 580 LSRAGLLDEA 589
>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 757
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 207/655 (31%), Positives = 332/655 (50%), Gaps = 6/655 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + F N +L Y+K ++ A +FD M R+ +SW+ LI G G
Sbjct: 90 LIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEG 149
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F EPN T V V AC S + G ++HG + +SGL + V N + M
Sbjct: 150 LWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASWSVQNSFLCM 209
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEF 178
Y + A+ +FD E++ ISW +++ Y Q E GL+IF +LS S +
Sbjct: 210 YADVDM-DCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLS-TSRITPDGV 267
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
SVL ACA N+ +G +H L L+ D FV LI++Y+KC+ A VFS +
Sbjct: 268 ILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAFEVFSEM 327
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ +W++L+ G K EA+ L M + G+ EVT L +
Sbjct: 328 PRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICKYFAHPYHCK 387
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H I+ G S V N+++D Y+KC L+E + + F DVV W+ +IAG
Sbjct: 388 AVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCG 447
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EAI + + M PN T N+L S ++ H ++ G + V +G+
Sbjct: 448 KPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVGT 507
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
A+VDMY+KCG + +RK F+ + KN+++W+TM+ Y +GL EAL + + M+ ++IKP
Sbjct: 508 AIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKP 567
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N T++ VL+AC H GLVE G F SMI+DHG+ P +H + +V + + G+ A E
Sbjct: 568 NALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDAMEL 627
Query: 539 IKSSP--IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
I+ P VW LLS C+T++ LG A ++L +P + + +++ S++YA
Sbjct: 628 IRMMPETFRAGASVWGALLSACRTYRSSTLGEKAVYQVLELEPLNLAGYLLASSMYASDG 687
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
+WD A+++ + +E+ ++ G S + +K H F + Q ++H ++NQL
Sbjct: 688 LWDNAARMKLLARERGVRAVAGYSIVHVDSKAHKFVAGDKSCSQAGNIHHMLNQL 742
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 232/465 (49%), Gaps = 6/465 (1%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
GK +H + ++ + + + N ++N Y KCG L +A VFD+ R+S+SW L+
Sbjct: 83 GKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLD 142
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
G V GL F+ +R +G + + ++ AC L + G+Q+H + + L V
Sbjct: 143 YGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASWSV 202
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SG 273
+ +YA + +D A +F + D+ +WSA+IGGY Q + + +F KM S S
Sbjct: 203 QNSFLCMYADVD-MDCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSR 261
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ P V VL A A+ GR +H L I G S FV N+++D YSKC+ +
Sbjct: 262 ITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAF 321
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
+ F EM + VSWN+L++G + + Y EA+ L+ M EG + T N L I
Sbjct: 322 EVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICKYFA 381
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
K HC ++ G +SN ++ ++L+D YAKC + A +VF +++V W+TM+
Sbjct: 382 HPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIA 441
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC-VHIGLVEEGWHYFNSMIRDHGI 512
G+A G EA+ ++ M E PN T I +L AC V L W + ++ R G+
Sbjct: 442 GFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRR--GL 499
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ + ++V +++ G+ + + P + N + W +++
Sbjct: 500 AAEVAVGTAIVDMYSKCGEIEASRKAFNQIP-QKNIITWSTMIAA 543
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 157/311 (50%), Gaps = 7/311 (2%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLASRVFSNIQL 240
VL AC+ L + G +H+ + K A FD F ++G ++N Y KC +LD A VF +++
Sbjct: 71 VLKACSYLSYID-GKCLHACLIKTA--FDSFTSIGNSILNFYIKCGELDTAVSVFDSMRS 127
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D +W+ LI G G E + F+ +G P+ T ++ A ++ G QL
Sbjct: 128 RDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQL 187
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +I+ G + V N+ L Y+ + ++ + FDEM E DV+SW+A+I G++
Sbjct: 188 HGYLIQSGLWASWSVQNSFLCMYADVD-MDCARILFDEMPEKDVISWSAMIGGYVQYLED 246
Query: 361 GEAIELLKDMLFEGH-CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+++ + ML P+ ++L ++ I G+ H + G DS++ + ++
Sbjct: 247 QIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNS 306
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+DMY+KC A +VF + +N VSWN++L G + EAL + M+ I+ +
Sbjct: 307 LIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEAD 366
Query: 480 DNTFIGVLSAC 490
+ T + L C
Sbjct: 367 EVTLVNCLQIC 377
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 168/352 (47%), Gaps = 20/352 (5%)
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL---MPSEVTFSYVLGA 287
AS + L +W+ I + K E I + ++ ++G+ + F VL A
Sbjct: 15 ASMAMRFLSTSRLLSWTLRIKELSSNEKWHEVISQYYEITNAGISHHLLDVTLFPPVLKA 74
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
+ + I G+ LH+ +IK F SFT + N++L+FY KC L+ ++ FD M D VSW
Sbjct: 75 CSYLS-YIDGKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSW 133
Query: 348 NALIAGHLASCHYGEAIELLKDML---FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCC 404
N LI G L YG +E L + G PN+ T ++ + A + G Q H
Sbjct: 134 NVLIHGCL---DYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGY 190
Query: 405 IVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREA 464
+++ G ++ + ++ + MYA ++ AR +FD + K+++SW+ M+ GY Q+ +
Sbjct: 191 LIQSGLWASWSVQNSFLCMYADVD-MDCARILFDEMPEKDVISWSAMIGGYVQYLEDQIG 249
Query: 465 LEIYS-MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV 523
L+I+ M+ ++I P+ + VL AC + + G + + G+ + S++
Sbjct: 250 LQIFQKMLSTSRITPDGVILVSVLKACANSVNITMG-RLVHGLTICRGLDSDLFVKNSLI 308
Query: 524 HLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL 575
+++ A+E P N V W LLSG L+L + +E +L
Sbjct: 309 DMYSKCKDAGSAFEVFSEMP-RRNNVSWNSLLSG------LILNKKYSEALL 353
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 17/292 (5%)
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+ MG A+ + F S LL +L+ E+ ++ W+ +I+ + + G +
Sbjct: 4 VVMGPPKAQASASMAMRFLSTSRLLSWTLR-IKELSSNE--KWHEVISQYYEITNAGISH 60
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
LL LF +L S + I+ GK H C++K FDS IG+++++ Y
Sbjct: 61 HLLDVTLF----------PPVLKACSYLSYID-GKCLHACLIKTAFDSFTSIGNSILNFY 109
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG L+ A VFD + S++ VSWN ++ G +G E L + + +PN +T +
Sbjct: 110 IKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLV 169
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
++ AC + +EG +I+ G+ S + ++A A P
Sbjct: 170 LLVQACRSLRAKQEGLQLHGYLIQS-GLWASWSVQNSFLCMYA-DVDMDCARILFDEMP- 226
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
E + + W ++ G + + +G +K+LST I++S + A AN
Sbjct: 227 EKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACAN 278
>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 206/692 (29%), Positives = 356/692 (51%), Gaps = 47/692 (6%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ Y+K + DA K+F + NV+S++ALISGFS+ + A+ F M+ +E
Sbjct: 134 NALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIE 193
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN YT+V ++AC D + G ++HG + + GL + N L+ +Y KCG L +
Sbjct: 194 PNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRL 253
Query: 134 FDASLERNSISWVSLLSS------YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
F+ ER+ SW +++SS Y + ++ G+++ G+ + FS +++L AC
Sbjct: 254 FEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLC-----KGLKVDHFSLSTLLTAC 308
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A G Q+H+L K LE V+ LI Y KC + + +F + + D+ W+
Sbjct: 309 AGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWT 368
Query: 248 ALIGGYAQLG--------------KAC-----------------EAIDLFVKMFSSGLMP 276
+I Y + G + C A++LF++M G+
Sbjct: 369 GMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEI 428
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
S+ T + ++ A +K +Q+ ++K G S + + ++D Y++C +E++ K F
Sbjct: 429 SDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIF 488
Query: 337 DEMD-EHDVVSW-NALIAGHLASCHYGEAIELLKDMLFEGH-CPNLYTYSNILNISSDIP 393
+ E+D + ++I G+ + EAI L EG + ++IL++ I
Sbjct: 489 YQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIG 548
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
E GKQ HC +K G + +G+A V MY+KC ++DA +VF+ ++ +++VSWN ++
Sbjct: 549 FHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVA 608
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH--IGLVEEGWHYFNSMIRDHG 511
G+ H G +AL I+ M++ IKP+ TF ++SA H + LV+ F SM +H
Sbjct: 609 GHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHN 668
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA 571
I P ++H AS + + G A + I++ P+EP+ VWR LL+ C+ +K+ L + AA
Sbjct: 669 IKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAA 728
Query: 572 EKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
IL+ +P+D ++I+ SN+Y+ + W + KVR+ M+EK +K SW +NK+H F
Sbjct: 729 RNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSF 788
Query: 632 STSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ QG D++ + L + GYVPD
Sbjct: 789 YARDRSHPQGKDIYSGLEILILECLKVGYVPD 820
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 211/413 (51%), Gaps = 35/413 (8%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM-V 68
V N L+ +Y K ++ +LF+EMPER++ SW+ +IS + + A +YFR M +
Sbjct: 231 VFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQL 290
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC---- 124
C L+ ++++ ++ACA G+++H + GLE + VS+ LI Y KC
Sbjct: 291 CKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSAN 350
Query: 125 ---------------------------GLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
G+L SA VF+ +RN IS+ ++L+ + +
Sbjct: 351 DVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDD 410
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
L++F+ + GV IS+ + S++ AC +L + KV QI V K + + +
Sbjct: 411 GSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETA 470
Query: 218 LINLYAKCEKLDLASRVFSNIQLP-DLTAW-SALIGGYAQLGKACEAIDLFVKMFSSG-L 274
L+++Y +C +++ A ++F L D TA +++I GYA+ GK EAI LF S G +
Sbjct: 471 LVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAI 530
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+ EV + +L + G+Q+H +K G + T V N + YSKC ++++++
Sbjct: 531 VMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVR 590
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
F+ M+ D+VSWN L+AGH+ +A+ + K M G P+ T++ I++
Sbjct: 591 VFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIIS 643
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 219/445 (49%), Gaps = 37/445 (8%)
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
GD + +H + + LE + + N LI+ Y K GL+ A VF N +S+ +L+
Sbjct: 111 GDPDLARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALI 168
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
S + + +++F SG+ +E++ ++L AC + ++G Q+H +V K L
Sbjct: 169 SGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLL 228
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
F+ L+ LY KC LDL R+F + D+T+W+ +I + K EA D F M
Sbjct: 229 SCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGM 288
Query: 270 -FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC-- 326
GL + S +L A A + + G+QLH+L +K+G S V+++++ FY+KC
Sbjct: 289 QLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGS 348
Query: 327 -----------------------------ELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+L+ +++ F++M + + +S+NA++AG +
Sbjct: 349 ANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRN 408
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
A+EL +ML EG + T ++I+ + + + +Q ++K G SN I
Sbjct: 409 DDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIE 468
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKN--LVSWNTMLVGYAQHGLGREALEIY-SMMQEN 474
+ALVDMY +CGR+ DA K+F S +N +M+ GYA++G EA+ ++ S E
Sbjct: 469 TALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEG 528
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEG 499
I ++ +LS C IG E G
Sbjct: 529 AIVMDEVMSTSILSLCGSIGFHEMG 553
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 182/358 (50%), Gaps = 23/358 (6%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+VIT+ ++ Y++F ++ A ++F++MP+RN IS++A+++G S+ AL F M+
Sbjct: 363 DVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEML 422
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+E + T ++AC + ++I G + + G+ NS + L++MY +CG +
Sbjct: 423 EEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRME 482
Query: 129 SAQFVF-DASLERNSISWV-SLLSSYCQCGEHVHGLKIFLLSRKSG-VAISEFSCASVLG 185
A+ +F SLE + + + S++ Y + G+ + +F + G + + E S+L
Sbjct: 483 DAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILS 542
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
C +G ++G Q+H K L + V +++Y+KC +D A RVF+ + + D+ +
Sbjct: 543 LCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVS 602
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ L+ G+ + +A+ ++ KM +G+ P +TF+ ++ A+ + + SL +
Sbjct: 603 WNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVD-SCRSLFV 661
Query: 306 KMG-----------FSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALI 351
M ++SF V + LLEE+ +T M E DV W AL+
Sbjct: 662 SMETEHNIKPTLEHYASFISV-------LGRWGLLEEAEQTIRNMPLEPDVYVWRALL 712
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 125/261 (47%), Gaps = 5/261 (1%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
R +H+ +K+ F+ N ++ Y K L+ ++ K F + +VVS+ ALI+G
Sbjct: 116 ARAVHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
S EA+EL ML G PN YT+ IL + G Q H +VK G S V I
Sbjct: 174 SDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFI 233
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK- 475
+AL+ +Y KCG L+ ++F+ + +++ SWNT++ + EA + + MQ K
Sbjct: 234 CNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKG 293
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+K + + +L+AC +G +++ G+ + +S++ + G
Sbjct: 294 LKVDHFSLSTLLTACAGSVKPMKG-QQLHALALKVGLESHLSVSSSLIGFYTKCGSANDV 352
Query: 536 YEFIKSSPIEPNKVVWRCLLS 556
+ ++ PI + + W +++
Sbjct: 353 TDLFETMPIR-DVITWTGMIT 372
>gi|357155523|ref|XP_003577148.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 735
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 194/606 (32%), Positives = 322/606 (53%), Gaps = 12/606 (1%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
LLLMY R+ DA+ F E+ R++ W+A++ G+ G A+ LM C +
Sbjct: 127 LLLMYANHGRVADAEGAFAEVRRRDLACWNAMLEGYVSNGCGHEAMRAVVLMRRC----D 182
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
+TYV AV AC G++ G+++HG + + E ++ V N L++MY + GL A VF
Sbjct: 183 MFTYVSAVKACLITGESDFGRQLHGCVIHNMFEPDTSVMNVLVDMYFRAGLKDVAMAVFR 242
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
L +++ISW +++S + + L F +SG +E + + +L CA N +
Sbjct: 243 RILRKDTISWNTVISGFAHDEDDREVLGCFADMSRSGCKPNEVTLSVMLRLCAAKENASL 302
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G+QI L + + VA +IN+ ++C L+ A F N++ ++ W+ +I GY
Sbjct: 303 GLQIFGLAYCHGYSENVLVANAVINMLSRCGLLNSADGFFCNLRFRNIVTWNEMIAGYGL 362
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
+ +A+ LF M G P E T+S VL AF + E Q+H+ I+K G +S FV
Sbjct: 363 YSYSEDAMRLFRSMVCFGERPDEFTYSAVLSAFQEAHEPRNHEQVHASILKQGITSRQFV 422
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
+ +++ + ++ +LK ++ + D+VSW +I+ L E + L LF G
Sbjct: 423 STSLIKAKAVFGSVQSALKIMEDTGKMDLVSWGVVISAFLKHGLNNEVMSLFD--LFRGD 480
Query: 376 CPNL---YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
N + + +LN ++ + ++ H +++ G ++ + SALVD YAKCG +
Sbjct: 481 SMNRADEFILATVLNACANAALLRQCRRVHSLVIRTGHSNHFCVASALVDAYAKCGGIAS 540
Query: 433 ARKVFDHLS--SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
A+ F +S S + + +NTML YA HGL EAL +Y M ++ P TF+ ++SAC
Sbjct: 541 AKSAFADVSSGSGDAILYNTMLTAYANHGLINEALSLYEDMARAQLVPTPATFVALVSAC 600
Query: 491 VHIGLVEEGWHYFNSMI-RDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
+ GLVE+G F+ M+ +HGI P + A++V L A +G A + I+ P+ P
Sbjct: 601 SNFGLVEQGKILFSLMLSEEHGIHPTRANYATLVDLLARKGFLHEAKDIIEVMPLHPWPS 660
Query: 550 VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK 609
VWR L++GC+ H ++ LG AAE+ILS P A++ LSNV+A+ W + RK+M
Sbjct: 661 VWRSLMNGCRIHGNMELGVLAAEQILSMTPSSDGAYVSLSNVFADDGEWHLAEEARKMMA 720
Query: 610 EKSLKK 615
E ++K
Sbjct: 721 ENQVRK 726
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 152/564 (26%), Positives = 265/564 (46%), Gaps = 8/564 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + T NHLL+ Y + + +A +FDEMP RN++SW+A++SG ++ G ++
Sbjct: 10 LLKLGMSGDTFTANHLLIAYSRTGLLKNALGVFDEMPHRNLVSWTAMVSGSARGGASQLG 69
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDA-RSGKEIHGRMYRSGLELNSHVSNCLIN 119
L F MV PN + A+ A AS D R G +HG + G+ + + L+
Sbjct: 70 LGLFVSMVRSGFLPNEFALASALRATASCHDGLRLGLSLHGVAVKVGVGGDPFAGSSLLL 129
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY G ++ A+ F R+ W ++L Y G ++ +L R+ + F+
Sbjct: 130 MYANHGRVADAEGAFAEVRRRDLACWNAMLEGYVSNGCGHEAMRAVVLMRRCDM----FT 185
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S + AC + G G Q+H V E D V L+++Y + D+A VF I
Sbjct: 186 YVSAVKACLITGESDFGRQLHGCVIHNMFEPDTSVMNVLVDMYFRAGLKDVAMAVFRRIL 245
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D +W+ +I G+A E + F M SG P+EVT S +L A + G Q
Sbjct: 246 RKDTISWNTVISGFAHDEDDREVLGCFADMSRSGCKPNEVTLSVMLRLCAAKENASLGLQ 305
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+ L G+S VAN V++ S+C LL + F + ++V+WN +IAG+ +
Sbjct: 306 IFGLAYCHGYSENVLVANAVINMLSRCGLLNSADGFFCNLRFRNIVTWNEMIAGYGLYSY 365
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+A+ L + M+ G P+ +TYS +L+ + +Q H I+K G S + ++
Sbjct: 366 SEDAMRLFRSMVCFGERPDEFTYSAVLSAFQEAHEPRNHEQVHASILKQGITSRQFVSTS 425
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+ A G + A K+ + +LVSW ++ + +HGL E + ++ + + + +
Sbjct: 426 LIKAKAVFGSVQSALKIMEDTGKMDLVSWGVVISAFLKHGLNNEVMSLFDLFRGDSMNRA 485
Query: 480 DNTFIG-VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYE 537
D + VL+AC + L+ + + +IR G S +++V +A C G
Sbjct: 486 DEFILATVLNACANAALLRQCRRVHSLVIRT-GHSNHFCVASALVDAYAKCGGIASAKSA 544
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTH 561
F S + +++ +L+ H
Sbjct: 545 FADVSSGSGDAILYNTMLTAYANH 568
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 224/469 (47%), Gaps = 15/469 (3%)
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
+H ++ + G+ ++ +N L+ Y + GLL +A VFD RN +SW +++S + G
Sbjct: 6 LHAQLLKLGMSGDTFTANHLLIAYSRTGLLKNALGVFDEMPHRNLVSWTAMVSGSARGGA 65
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN-LKVGMQIHSLVFKCALEFDKFVAM 216
GL +F+ +SG +EF+ AS L A A + L++G+ +H + K + D F
Sbjct: 66 SQLGLGLFVSMVRSGFLPNEFALASALRATASCHDGLRLGLSLHGVAVKVGVGGDPFAGS 125
Query: 217 GLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
L+ +YA ++ A F+ ++ DL W+A++ GY G EA+ V LM
Sbjct: 126 SLLLMYANHGRVADAEGAFAEVRRRDLACWNAMLEGYVSNGCGHEAMRAVV------LMR 179
Query: 277 SEVTFSYV--LGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
F+YV + A E+ GRQLH +I F T V N ++D Y + L + ++
Sbjct: 180 RCDMFTYVSAVKACLITGESDFGRQLHGCVIHNMFEPDTSVMNVLVDMYFRAGLKDVAMA 239
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
F + D +SWN +I+G E + DM G PN T S +L + +
Sbjct: 240 VFRRILRKDTISWNTVISGFAHDEDDREVLGCFADMSRSGCKPNEVTLSVMLRLCAAKEN 299
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
G Q G+ NV++ +A+++M ++CG LN A F +L +N+V+WN M+ G
Sbjct: 300 ASLGLQIFGLAYCHGYSENVLVANAVINMLSRCGLLNSADGFFCNLRFRNIVTWNEMIAG 359
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC--VHIGLVEEGWHYFNSMIRDHGI 512
Y + +A+ ++ M +P++ T+ VLSA H E H + I GI
Sbjct: 360 YGLYSYSEDAMRLFRSMVCFGERPDEFTYSAVLSAFQEAHEPRNHEQVH---ASILKQGI 416
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ R S++ A G + A + ++ + + + V W ++S H
Sbjct: 417 TSRQFVSTSLIKAKAVFGSVQSALKIMEDTG-KMDLVSWGVVISAFLKH 464
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 211/466 (45%), Gaps = 8/466 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + F P+ N L+ MY + + A +F + ++ ISW+ +ISGF+
Sbjct: 209 VIHNMFEPDTSVMNVLVDMYFRAGLKDVAMAVFRRILRKDTISWNTVISGFAHDEDDREV 268
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M +PN T + CA++ +A G +I G Y G N V+N +INM
Sbjct: 269 LGCFADMSRSGCKPNEVTLSVMLRLCAAKENASLGLQIFGLAYCHGYSENVLVANAVINM 328
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+CGLL+SA F RN ++W +++ Y +++F G EF+
Sbjct: 329 LSRCGLLNSADGFFCNLRFRNIVTWNEMIAGYGLYSYSEDAMRLFRSMVCFGERPDEFTY 388
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++VL A + Q+H+ + K + +FV+ LI A + A ++ +
Sbjct: 389 SAVLSAFQEAHEPRNHEQVHASILKQGITSRQFVSTSLIKAKAVFGSVQSALKIMEDTGK 448
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM--PSEVTFSYVLGAFADVKETIGGR 298
DL +W +I + + G E + LF +F M E + VL A A+ R
Sbjct: 449 MDLVSWGVVISAFLKHGLNNEVMSLF-DLFRGDSMNRADEFILATVLNACANAALLRQCR 507
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD--EHDVVSWNALIAGHLA 356
++HSL+I+ G S+ VA+ ++D Y+KC + + F ++ D + +N ++ +
Sbjct: 508 RVHSLVIRTGHSNHFCVASALVDAYAKCGGIASAKSAFADVSSGSGDAILYNTMLTAYAN 567
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP--GFDSNV 414
EA+ L +DM P T+ +++ S+ +E GK ++ G
Sbjct: 568 HGLINEALSLYEDMARAQLVPTPATFVALVSACSNFGLVEQGKILFSLMLSEEHGIHPTR 627
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG 459
+ LVD+ A+ G L++A+ + + + S W +++ G HG
Sbjct: 628 ANYATLVDLLARKGFLHEAKDIIEVMPLHPWPSVWRSLMNGCRIHG 673
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 137/301 (45%), Gaps = 9/301 (2%)
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
LH+ ++K+G S TF AN +L YS+ LL+ +L FDEM ++VSW A+++G
Sbjct: 5 HLHAQLLKLGMSGDTFTANHLLIAYSRTGLLKNALGVFDEMPHRNLVSWTAMVSGSARGG 64
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI-PAIEWGKQTHCCIVKPGFDSNVVIG 417
+ L M+ G PN + ++ L ++ + G H VK G + G
Sbjct: 65 ASQLGLGLFVSMVRSGFLPNEFALASALRATASCHDGLRLGLSLHGVAVKVGVGGDPFAG 124
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
S+L+ MYA GR+ DA F + ++L WN ML GY +G G EA+ +M+ +
Sbjct: 125 SSLLLMYANHGRVADAEGAFAEVRRRDLACWNAMLEGYVSNGCGHEAMRAVVLMRRCDMF 184
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
T++ + AC+ G + G +I + P + +V ++ G A
Sbjct: 185 ----TYVSAVKACLITGESDFGRQLHGCVIHNM-FEPDTSVMNVLVDMYFRAGLKDVAMA 239
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKD--LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
+ + + + W ++SG +D VLG +A P + + +ML A+
Sbjct: 240 VFR-RILRKDTISWNTVISGFAHDEDDREVLGCFADMSRSGCKPNEVTLSVMLRLCAAKE 298
Query: 596 N 596
N
Sbjct: 299 N 299
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/595 (30%), Positives = 328/595 (55%), Gaps = 9/595 (1%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
N+Y+ + A SA + + +H + +SG S + + LI+ Y KCG L+ A+ +F
Sbjct: 2 NFYSSLIAQSAHTK--SLTTLRAVHTNVIKSGFSY-SFLGHKLIDGYIKCGSLAEARKLF 58
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D R+ ++W S++SS+ G+ ++ + GV ++ +++ A + LG ++
Sbjct: 59 DELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIR 118
Query: 195 VGMQIHSLVFKCALE-FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
G + H L LE D FVA L+++YAK +K+ A VF + D+ ++ALI GY
Sbjct: 119 HGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGY 178
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
AQ G EA+ +F M + G+ P+E T + +L ++ + + G+ +H L++K G S
Sbjct: 179 AQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVV 238
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
++L YS+C ++E+S+K F+++D + V+W + + G + + A+ + ++M+
Sbjct: 239 ASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRC 298
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN +T S+IL S + +E G+Q H +K G D N G+AL+++Y KCG ++ A
Sbjct: 299 SISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKA 358
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
R VFD L+ ++V+ N+M+ YAQ+G G EALE++ ++ + PN TFI +L AC +
Sbjct: 359 RSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNA 418
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE--FIKSSPIEPNKVVW 551
GLVEEG F S+ +H I +DH ++ L G++RR E + P+ V+W
Sbjct: 419 GLVEEGCQIFASIRNNHNIELTIDHFTCMIDLL---GRSRRLEEAAMLIEEVRNPDVVLW 475
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
R LL+ CK H ++ + KIL P D HI+L+N+YA A W++ +++ +++
Sbjct: 476 RTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDL 535
Query: 612 SLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIY 666
LKK SW ++ ++H F + + +++ E+++ L + GY P+ +
Sbjct: 536 KLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRF 590
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 246/483 (50%), Gaps = 7/483 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SGF + + + L+ Y+K + +A+KLFDE+P R++++W+++IS G + A
Sbjct: 27 VIKSGFSYSFLGHK-LIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEA 85
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLE-LNSHVSNCLIN 119
+ ++ M+ + P+ YT+ A + G R G+ HG GLE L+ V++ L++
Sbjct: 86 VEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVD 145
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY K + A VF LE++ + + +L+ Y Q G LKIF GV +E++
Sbjct: 146 MYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYT 205
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
A +L C LG+L G IH LV K LE L+ +Y++C ++ + +VF+ +
Sbjct: 206 LACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLD 265
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ W++ + G Q G+ A+ +F +M + P+ T S +L A + + G Q
Sbjct: 266 YANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQ 325
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H++ +K+G + +++ Y KC ++++ FD + E DVV+ N++I + +
Sbjct: 326 IHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGF 385
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG-- 417
EA+EL + + G PN T+ +IL ++ +E G Q I + + + I
Sbjct: 386 GHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASI-RNNHNIELTIDHF 444
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ ++D+ + RL +A + + + + ++V W T+L HG A ++ S + E +
Sbjct: 445 TCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHGEVEMAEKVMSKILE--LA 502
Query: 478 PND 480
P D
Sbjct: 503 PGD 505
>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
Length = 700
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 181/627 (28%), Positives = 328/627 (52%), Gaps = 5/627 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + L+ Y K + A ++FD MP RN +W+A+I G G A
Sbjct: 74 VLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEA 133
Query: 61 LNYFRLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEI----HGRMYRSGLELNSHVSN 115
L F MV + + +TY + ACA+ G G+++ + N V
Sbjct: 134 LEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVEADIASGNARPNVFVQC 193
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
L++M+ KCG L A+ VF++ R+ +W +++ G + + +F R G +
Sbjct: 194 ALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGV 253
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
A+V+ AC G L+VG +H K D +V+ L+++Y KC +++A +F
Sbjct: 254 DSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLF 313
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ D+ +WS+LI GY+Q G ++ LF +M S G+ P+ T + +L + +K
Sbjct: 314 WSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIR 373
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+++H I+ G FV + ++D YSK L+ + F + D+ WN+++AG+
Sbjct: 374 SGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYA 433
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+ + A L+ + G P+ T ++L + + + GK+ H ++K +S
Sbjct: 434 VNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCS 493
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ +AL+DMY KCG L A++VF ++ +N V++N ++ + +H +AL + +M+ +
Sbjct: 494 VNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDG 553
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
I P+ TF+ +LS C H GL+++G H ++SM+ D+ ISP +H + +V L++ G+ A
Sbjct: 554 IAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEA 613
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
+ F+ + EP V LL+ C+ H + + ++I +P D HI+LSN+YA+A
Sbjct: 614 WCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADA 673
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWT 622
MW + ++R +++E++LKK+TG S T
Sbjct: 674 GMWSDVTRIRTMIQERNLKKETGNSLT 700
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 5/208 (2%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
R+LH+ ++ G T + ++ Y+K + +L+ FD M + +WNA+I G +
Sbjct: 67 ARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVD 126
Query: 357 SCHYGEAIELLKDMLFEGHCP-NLYTYSNILNISSDIPAIEWGKQ----THCCIVKPGFD 411
+ + EA+E+ M+ +G + +TY ++ + + A+ G++ I
Sbjct: 127 AGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVEADIASGNAR 186
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
NV + ALVDM+AKCG L++AR VF+ + ++L +W M+ G G E +++++ M
Sbjct: 187 PNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHM 246
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ + V+SAC G ++ G
Sbjct: 247 RSEGFGVDSLIAATVISACGRAGELQVG 274
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 11/172 (6%)
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
P + ++ H ++ G V+ + LV YAK G + A +VFD + +N +WN ++
Sbjct: 62 PDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVI 121
Query: 453 VGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEG---WHYFNSMIR 508
G G EALE++ M+ + + + T+ V+ AC +G V +G W + I
Sbjct: 122 KGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVEADIA 181
Query: 509 DHGISPRMDHIASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
P + ++V +FA C + R +E ++ + W ++ G
Sbjct: 182 SGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDL----AAWTAMIGG 229
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 198/722 (27%), Positives = 353/722 (48%), Gaps = 61/722 (8%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGF-SQIGMPEVA 60
+ ++P+ N L+ Y+ F A +F RN + W++ + F S G +
Sbjct: 600 LPQKWNPDAAAKN-LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIV 658
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ + + + Y A+ C D G EIHG + + G +L+ ++ L+N
Sbjct: 659 LEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNF 718
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YG+C L A VF ++ W + Q + G+++F + S + +
Sbjct: 719 YGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATI 778
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
VL AC +G L QIH VF+ L+ D + LI++Y+K KL+LA RVF +++
Sbjct: 779 VRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMEN 838
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTF------------------- 281
+ ++W+++I YA LG +A LF ++ SS + P VT+
Sbjct: 839 RNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNI 898
Query: 282 ----------------SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
+ VL A +++ G++ H +++ GF +V +++D Y K
Sbjct: 899 LQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVK 958
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN- 384
L + FD M ++ +WN+L++G+ + +A+ LL M EG P+L T++
Sbjct: 959 NHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGM 1018
Query: 385 -----------------------ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+L + + ++ GK+ HC ++ GF +V + +AL+
Sbjct: 1019 ISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALI 1078
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY+K L +A KVF + +K L SWN M++G+A GLG+EA+ +++ MQ+ + P+
Sbjct: 1079 DMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAI 1138
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF +LSAC + GL+ EGW YF+SMI D+ I PR++H +V L G A++ I +
Sbjct: 1139 TFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHT 1198
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P++P+ +W LL C+ HK+L AA+ + +P +++ +I++ N+Y+ N W++
Sbjct: 1199 MPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDM 1258
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
+R++M ++ SW ++ ++H FS+ ++ + QL + GYV
Sbjct: 1259 DHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYV 1318
Query: 662 PD 663
PD
Sbjct: 1319 PD 1320
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 196/446 (43%), Gaps = 59/446 (13%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +V L+ Y + + A ++F EMP + W+ I Q +
Sbjct: 700 LIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKG 759
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ FR M L+ T V + AC G + K+IHG ++R GL+ + + N LI+M
Sbjct: 760 VELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISM 819
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ-------------------------- 154
Y K G L A+ VFD+ RN+ SW S++SSY
Sbjct: 820 YSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTW 879
Query: 155 ----CGEHVHGLK---IFLLSRKSGVAISEFSCA--SVLGACAVLGNLKVGMQIHSLVFK 205
G +HG K + +L R G S + SVL A + LG L +G + H V +
Sbjct: 880 NCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLR 939
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
+ D +V LI++Y K L A VF N++ ++ AW++L+ GY+ G +A+ L
Sbjct: 940 NGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRL 999
Query: 266 FVKMFSSGL------------------------MPSEVTFSYVLGAFADVKETIGGRQLH 301
+M G+ MP+ + + +L A A + G+++H
Sbjct: 1000 LNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIH 1059
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
L I+ GF FVA ++D YSK L+ + K F + + SWN +I G
Sbjct: 1060 CLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGK 1119
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILN 387
EAI + +M G P+ T++ +L+
Sbjct: 1120 EAISVFNEMQKVGVGPDAITFTALLS 1145
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 125/279 (44%), Gaps = 30/279 (10%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GF +V L+ MYVK + AQ +FD M RN+ +W++L+SG+S GM E A
Sbjct: 937 VLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDA 996
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVS------------------------ACASRGDARSGK 96
L M ++P+ T+ G +S ACAS + GK
Sbjct: 997 LRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGK 1056
Query: 97 EIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG 156
EIH R+G + V+ LI+MY K L +A VF + SW ++ + G
Sbjct: 1057 EIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFG 1116
Query: 157 EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ-IHSLV--FKCALEFDKF 213
+ +F +K GV + ++L AC G + G + S++ ++ + +
Sbjct: 1117 LGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHY 1176
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALIG 251
M ++L + LD A + + L PD T W AL+G
Sbjct: 1177 CCM--VDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLG 1213
>gi|449439723|ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/544 (33%), Positives = 292/544 (53%), Gaps = 2/544 (0%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
YV + C D+R G IH + + L + N ++N Y KCG LS +FD
Sbjct: 218 YVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMP 277
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI-SEFSCASVLGACAVLGNLKVGM 197
ERN +SW ++++ + Q G L +F G + +EF+ S L AC++ L
Sbjct: 278 ERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSY 337
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
QI++ + + + F+ + + EKL A VF + D +W+A++ GY QL
Sbjct: 338 QIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLA 397
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
E + +M + P TF+ +L A + E G Q+H ++K G+ + V N
Sbjct: 398 YF-ELPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGN 456
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
++ D Y K + L + K FDEM DV SW + AG L +A+E++ +M G
Sbjct: 457 SLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRL 516
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
N +T + LN +++ +IE GK+ H +K G D +V + +AL+DMYAKCG + A VF
Sbjct: 517 NKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVF 576
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ +++VSW TM++G+A +G +EAL+I+ M++ + +PN TFI VL+AC G ++
Sbjct: 577 RSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFID 636
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
E W YF+SM DHGI+P DH +V+L G + A + I P +P +VW+ LL
Sbjct: 637 EAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGA 696
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
C H D+ G+ AAE L+ D D S +I+LSN++A + WD +R++M+ + +KK
Sbjct: 697 CLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFAGGDNWDSVGILRELMETRDVKKVP 756
Query: 618 GCSW 621
G SW
Sbjct: 757 GSSW 760
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 197/388 (50%), Gaps = 3/388 (0%)
Query: 5 GFHP-NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
GF P ++ +NH+L YVK R++ +LFDEMPERNV+SWSA+I+GF Q G P AL+
Sbjct: 244 GFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSL 303
Query: 64 FRLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F M C + PN +T V A+ AC+ +I+ + R G N + N +
Sbjct: 304 FGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALI 363
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
+ L A VF++ L ++++SW ++++ Y Q + K + V F+ AS
Sbjct: 364 RHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLA-YFELPKFWRRMNLESVKPDNFTFAS 422
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L A L ++G+Q+H + K D V L ++Y K +KL + F + D
Sbjct: 423 ILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSD 482
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ +W+ + G Q G+ +A+++ +M + G+ ++ T + L + A++ G++ H
Sbjct: 483 VCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHG 542
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
L IK+G V N +LD Y+KC + + F MDE VVSW +I G + E
Sbjct: 543 LRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKE 602
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISS 390
A+++ +M PN T+ +LN S
Sbjct: 603 ALQIFDEMRKGEAEPNHITFICVLNACS 630
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 152/287 (52%), Gaps = 1/287 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ NV N L ++ ++ +A ++F+ ++ +SW+A+++G+ Q+ E+
Sbjct: 343 IVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYFELP 402
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++R M ++P+ +T+ ++ A+ + R G ++HG++ +SG + V N L +M
Sbjct: 403 -KFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDM 461
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K L FD + SW + + QCGE + L++ + GV +++F+
Sbjct: 462 YVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRLNKFTL 521
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+ L +CA L +++ G + H L K + D V L+++YAKC + A+ VF ++
Sbjct: 522 ATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDE 581
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ +W+ +I G+A G+ EA+ +F +M P+ +TF VL A
Sbjct: 582 RSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNA 628
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 99/191 (51%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG+ ++ N L MYVK ++ D K FDEM +V SW+ + +G Q G P A
Sbjct: 443 LVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKA 502
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M + N +T A+++CA+ GK+ HG + G +++ V N L++M
Sbjct: 503 LEVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDM 562
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG ++SA VF + ER+ +SW +++ + G+ L+IF RK + +
Sbjct: 563 YAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITF 622
Query: 181 ASVLGACAVLG 191
VL AC+ G
Sbjct: 623 ICVLNACSQGG 633
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 176/539 (32%), Positives = 291/539 (53%), Gaps = 12/539 (2%)
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G+ ++V D S V+ +++C + ++ + GV + + ++
Sbjct: 9 GMKPPLRYVADPS------PLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELI 62
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C+ G ++ G ++H +F E FV L+N+Y K L+ A +F + ++
Sbjct: 63 KCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVV 122
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ +I Y+ +A+ + MF G+ P+ T+S VL A + RQLH I
Sbjct: 123 SWTTMISAYSNKLND-KALKCLILMFREGVRPNMFTYSSVLRACDGLPNL---RQLHCGI 178
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK G S FV + ++D YSK L+ +L FDEM D+V WN++I G + EA+
Sbjct: 179 IKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEAL 238
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
L K M G + T +++L + + +E G+Q H ++K FD ++++ +AL+DMY
Sbjct: 239 NLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMY 296
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG L DA F + K+++SW+TM+ G AQ+G R+ALE++ M+E+ +PN T +
Sbjct: 297 CKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVL 356
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVL AC H GLVE+GW+YF SM + G+ P +H ++ L G+ A + I
Sbjct: 357 GVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMEC 416
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP+ V WR LL C+ H+++ L YAA+KI+ +PED +I+LSN+YA W++ A+V
Sbjct: 417 EPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEV 476
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
RK M + ++K GCSW E+ ++H F + + ++ + +N L + GYVPD
Sbjct: 477 RKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPD 535
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 211/410 (51%), Gaps = 11/410 (2%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TY + C++RG + GK +H ++ G E V N L+NMY K LL A+ +FD
Sbjct: 57 TYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEM 116
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
ERN +SW +++S+Y + LK +L + GV + F+ +SVL AC L NL+
Sbjct: 117 PERNVVSWTTMISAYSN-KLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR--- 172
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+H + K LE D FV LI++Y+K LD A VF + DL W+++IGG+AQ
Sbjct: 173 QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNS 232
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
EA++LF +M +G + + T + VL A + GRQ+H ++K F + N
Sbjct: 233 DGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNN 290
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
++D Y KC LE++ F M E DV+SW+ ++AG + + +A+EL + M G P
Sbjct: 291 ALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRP 350
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKV 436
N T +L S +E G + K G D L+D+ + GRL++A K+
Sbjct: 351 NYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKL 410
Query: 437 FDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND-NTFI 484
+ + + V+W T+L H L IY+ + +++P D T+I
Sbjct: 411 IHEMECEPDSVTWRTLLGACRVH--RNVDLAIYAAKKIIELEPEDAGTYI 458
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 188/366 (51%), Gaps = 14/366 (3%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
G+ P + N LL MYVKF+ + +A+ LFDEMPERNV+SW+ +IS +S + + AL
Sbjct: 84 KGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSN-KLNDKALKC 142
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
LM + PN +TY + AC + R ++H + ++GLE + V + LI++Y K
Sbjct: 143 LILMFREGVRPNMFTYSSVLRACDGLPNLR---QLHCGIIKTGLESDVFVRSALIDVYSK 199
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
L +A VFD R+ + W S++ + Q + L +F +++G + + SV
Sbjct: 200 WSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSV 259
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L AC L L++G Q+H V K + D + LI++Y KC L+ A+ FS + D+
Sbjct: 260 LRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDV 317
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA--FADVKETIGGRQLH 301
+WS ++ G AQ G + +A++LF M SG P+ +T VL A A + E G
Sbjct: 318 ISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEK-GWYYFR 376
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHY 360
S+ G ++D + L+E++K EM+ E D V+W L L +C
Sbjct: 377 SMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTL----LGACRV 432
Query: 361 GEAIEL 366
++L
Sbjct: 433 HRNVDL 438
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 127/254 (50%), Gaps = 4/254 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G +V + L+ +Y K+S +++A +FDEMP R+++ W+++I GF+Q A
Sbjct: 178 IIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEA 237
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
LN F+ M + T + AC G+++H + + +L ++N LI+M
Sbjct: 238 LNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDL--ILNNALIDM 295
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L A F +E++ ISW ++++ Q G L++F ++SG + +
Sbjct: 296 YCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITV 355
Query: 181 ASVLGACAVLGNLKVG-MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
VL AC+ G ++ G S+ ++ + LI+L + +LD A ++ ++
Sbjct: 356 LGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEME 415
Query: 240 L-PDLTAWSALIGG 252
PD W L+G
Sbjct: 416 CEPDSVTWRTLLGA 429
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 303/552 (54%), Gaps = 6/552 (1%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL-LSSAQFVFDAS 137
Y + C G +IH + +SGLE + V N L+ +Y K G + VFD
Sbjct: 121 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 180
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
++ ISW S++S Y + G+ ++ L++F GV + F+ ++V+ AC+ LG+LK+G
Sbjct: 181 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR 240
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
H +V + + +A LI+++ + LD A ++F + PD W+++I +
Sbjct: 241 IFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRND 300
Query: 258 KACEAIDLFVKMFSS-GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
EA+ F M G+ P TF VL A ++ G+++H+ +I GF V
Sbjct: 301 FFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVE 360
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
++++D Y KC + ES + FD M + VSW+AL+ G+ + + I++ + M
Sbjct: 361 SSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EK 416
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
+LY + IL + + A+ GK+ HC ++ G +V++ SALVD+YAKCG + A+ +
Sbjct: 417 VDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTI 476
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
FD + +NL++WN+M+ G+AQ+G G EAL I++ M + IKP+ +FIG+L AC H GLV
Sbjct: 477 FDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLV 536
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+EG YF SM +D+GI ++H + +V L G A I++S + +W LL
Sbjct: 537 DEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLG 596
Query: 557 GCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
C T + + A++++ +P+ ++++L+NVY W++ ++R++MK++ + K
Sbjct: 597 ACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKM 656
Query: 617 TGCSWTELQNKM 628
G SW E +N +
Sbjct: 657 PGKSWIETKNNL 668
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 224/439 (51%), Gaps = 13/439 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKF-SRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV 59
+I SG + N LL +Y K + + +K+FD + ++VISW+++ISG+ ++G P
Sbjct: 144 VIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMN 203
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+L F M+ +EPN +T + AC+ GD + G+ HG + G + N +++ LI+
Sbjct: 204 SLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALID 263
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEF 178
M+G+ L A+ +FD LE ++I W S++S+ + L+ F + R G+ F
Sbjct: 264 MHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGF 323
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +VL AC LG LK G ++H+ V + V L+++Y KC + + R+F +
Sbjct: 324 TFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRM 383
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ + +WSAL+GGY Q G I +F KM L F +L A + G+
Sbjct: 384 PIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLY----CFGTILRTCAGLAAVRQGK 439
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H I+ G V + ++D Y+KC +E + FD+M ++++WN++I G +
Sbjct: 440 EVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNG 499
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG- 417
EA+ + M+ EG P+ ++ IL S ++ G++ + K D + +G
Sbjct: 500 RGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTK---DYGIKVGI 556
Query: 418 ---SALVDMYAKCGRLNDA 433
S +VD+ + G L +A
Sbjct: 557 EHYSCMVDLLGRAGLLEEA 575
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 211/407 (51%), Gaps = 8/407 (1%)
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
C+ GE L++ ++ AS+L C + G+QIH+ V K LEFD+
Sbjct: 94 CKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDR 153
Query: 213 FVAMGLINLYAKC-EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
FV L+ LY K +VF + + D+ +W+++I GY ++GK +++LF KM +
Sbjct: 154 FVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLA 213
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
G+ P+ T S V+ A +++ + GR H +++ GF S +A+ ++D + + L++
Sbjct: 214 YGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDD 273
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE-GHCPNLYTYSNILNISS 390
+ + FDE+ E D + W ++I+ + + EA+ M + G CP+ +T+ +L
Sbjct: 274 ARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACG 333
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
++ ++ GK+ H ++ GF NVV+ S+LVDMY KCG + +++++FD + KN VSW+
Sbjct: 334 NLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSA 393
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
+L GY Q+G + ++I+ M+ K + F +L C + V +G IR
Sbjct: 394 LLGGYCQNGDFKSVIQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKG 449
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G + +++V L+A G A P+ N + W ++ G
Sbjct: 450 GWRDVIVE-SALVDLYAKCGCIEYAQTIFDQMPVR-NLITWNSMIGG 494
>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 692
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 197/612 (32%), Positives = 316/612 (51%), Gaps = 9/612 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ SG V LL +Y+K + AQ LFDEMPER+ + W+ALI G+S+ G A
Sbjct: 76 LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDA 135
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F +M+ P+ T V + C G G+ +HG +SGLEL+S V N LI+
Sbjct: 136 WKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISF 195
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC L SA+ +F +++++SW +++ +Y Q G + +F + V IS +
Sbjct: 196 YSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTI 255
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++L A V + +H LV KC + D V L+ Y++C L A R++++ +
Sbjct: 256 INLLSA-------HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAK 308
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ ++++ YA+ G A+ F K + V +L G
Sbjct: 309 QDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMS 368
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH IK G + T V N ++ YSK + +E L F+++ E ++SWN++I+G + S
Sbjct: 369 LHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGR 428
Query: 360 YGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
A E+ M+ G P+ T +++L S + + GK+ H ++ F++ + +
Sbjct: 429 ASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCT 488
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAKCG A VF + + +WN+M+ GY+ GL AL Y M+E +KP
Sbjct: 489 ALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKP 548
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
++ TF+GVLSAC H G V+EG F +MI++ GISP + H A +V L A
Sbjct: 549 DEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYL 608
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I I+P+ VW LLS C H++L +G Y A K+ D ++ ++++SN+YA MW
Sbjct: 609 IWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMW 668
Query: 599 DETAKVRKIMKE 610
D+ +VR +MK+
Sbjct: 669 DDVVRVRNMMKD 680
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 230/507 (45%), Gaps = 25/507 (4%)
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDA--RSGKEIHGRMYRSGLELNSHVSNCLI 118
+ FR ++ L PN++T + A + ++ +++ + +SGL+ +V L+
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
N+Y K G ++SAQ +FD ER+++ W +L+ Y + G K+F++ + G + S
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSAT 152
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ ++L C G + G +H + K LE D V LI+ Y+KC +L A +F +
Sbjct: 153 TLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREM 212
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ +W+ +IG Y+Q G EAI +F MF + S VT +L A +
Sbjct: 213 KDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAH------VSHE 266
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH---- 354
LH L++K G + V +++ YS+C L + + + + +V ++++ +
Sbjct: 267 PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKG 326
Query: 355 ---LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
+A ++ + +L + + IL+ I+ G H +K G
Sbjct: 327 DMDIAVVYFSKTRQLCMKI-------DAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLC 379
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SM 470
+ ++ + L+ MY+K + +F+ L L+SWN+++ G Q G A E++ M
Sbjct: 380 TKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQM 439
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M + P+ T +L+ C + + G +R++ + A ++ ++A G
Sbjct: 440 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTA-LIDMYAKCG 498
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+A KS P W ++SG
Sbjct: 499 NEVQAESVFKSIK-APCTATWNSMISG 524
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 193/605 (31%), Positives = 315/605 (52%), Gaps = 40/605 (6%)
Query: 96 KEIHGRMYRSGLE-----LNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
K+IH ++ ++GL L+ + C I+ +G LS A +F++ + N W +++
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGN---LSYALLLFESIEQPNQFIWNTMIR 105
Query: 151 SYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF 210
V + ++ GV + ++ +L +CA +G + G QIH V K LE
Sbjct: 106 GNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLES 165
Query: 211 DKFVAMGLINLYAKCEKL-------------------------------DLASRVFSNIQ 239
D FV LIN+YA+ +L D A R+F I
Sbjct: 166 DPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIP 225
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ D +W+A+I GYAQ G+ EA+ F +M + + P+E T VL A A G
Sbjct: 226 VRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNW 285
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+ S I G S + N ++D YSKC L+++ F+ + E D++SWN +I G+
Sbjct: 286 VRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNS 345
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD-SNVVIGS 418
Y EA+ L + M PN T+ +IL + + A++ GK H I K +N + +
Sbjct: 346 YKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWT 405
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+L+DMYAKCG + A++VF + K+L SWN M+ G A HG ALE++ M++ +P
Sbjct: 406 SLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEP 465
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+D TF+GVLSAC H GLVE G F+SM+ D+ ISP++ H ++ L G A
Sbjct: 466 DDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEAL 525
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
+K+ ++P+ +W LL C+ H ++ LG +AA+ + +PE+ A+++LSN+YA A W
Sbjct: 526 MKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRW 585
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
D+ A++R + +K +KK GCS E+ + +H F Q D++++++++ L
Sbjct: 586 DDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKA 645
Query: 659 GYVPD 663
G+VPD
Sbjct: 646 GHVPD 650
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 244/497 (49%), Gaps = 40/497 (8%)
Query: 1 MITSGFHPNVITYNHLL--LMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPE 58
+I +G H + L+ F ++ A LF+ + + N W+ +I G S P
Sbjct: 55 IIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPV 114
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
A++++ M+ C +EPN YT+ + +CA G + GK+IHG + + GLE + V LI
Sbjct: 115 GAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLI 174
Query: 119 NMYGKCGLLSSAQFVFDAS-------------------------------LERNSISWVS 147
NMY + G L A+ VF S R+++SW +
Sbjct: 175 NMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNA 234
Query: 148 LLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
+++ Y Q G L F +++ VA +E + +VL ACA G+L++G + S +
Sbjct: 235 MIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHG 294
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
L + + LI++Y+KC LD A +F I D+ +W+ +IGGY+ + EA+ LF
Sbjct: 295 LGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFR 354
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK--MGFSSFTFVANTVLDFYSK 325
KM S + P++VTF +L A A + G+ +H+ I K +G ++ T + +++D Y+K
Sbjct: 355 KMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTN-TSLWTSLIDMYAK 413
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C +E + + F M + SWNA+I+G H A+EL + M EG P+ T+ +
Sbjct: 414 CGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGV 473
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--SALVDMYAKCGRLNDARKVFDHLSSK 443
L+ S +E G+Q +V+ +D + + ++D+ + G ++A + ++ K
Sbjct: 474 LSACSHAGLVELGRQCFSSMVE-DYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMK 532
Query: 444 -NLVSWNTMLVGYAQHG 459
+ W ++L HG
Sbjct: 533 PDGAIWGSLLGACRVHG 549
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 194/386 (50%), Gaps = 10/386 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+ +++ L+ Y ++DA++LF+E+P R+ +SW+A+I+G++Q G E AL +F+ M
Sbjct: 197 DAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMK 256
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ PN T V +SACA G G + + GL N + N LI+MY KCG L
Sbjct: 257 RANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLD 316
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ +F+ E++ ISW ++ Y + L +F ++S V ++ + S+L ACA
Sbjct: 317 KARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACA 376
Query: 189 VLGNLKVGMQIHSLVFKCALEF-DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
LG L +G IH+ + K L + + LI++YAKC ++ A +VF+ ++ L +W+
Sbjct: 377 YLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWN 436
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-LHSLIIK 306
A+I G A G A A++LF +M G P ++TF VL A + GRQ S++
Sbjct: 437 AMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVED 496
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIE 365
S ++D + L +E+ M+ + D W +L L +C +E
Sbjct: 497 YDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSL----LGACRVHGNVE 552
Query: 366 L---LKDMLFEGHCPNLYTYSNILNI 388
L LFE N Y + NI
Sbjct: 553 LGEFAAKHLFELEPENPGAYVLLSNI 578
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 131/262 (50%), Gaps = 8/262 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N+ N L+ MY K ++ A+ LF+ + E+++ISW+ +I G+S + + AL F
Sbjct: 294 GLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALF 353
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL-NSHVSNCLINMYGK 123
R M +EPN T+V + ACA G GK IH + + L L N+ + LI+MY K
Sbjct: 354 RKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAK 413
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + +A+ VF ++ SW +++S G L++F R G + + V
Sbjct: 414 CGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGV 473
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG-LINLYAKCEKLDLASRVFSNIQL-P 241
L AC+ G +++G Q S + + K G +I+L + D A + N+++ P
Sbjct: 474 LSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKP 533
Query: 242 DLTAWSALIG-----GYAQLGK 258
D W +L+G G +LG+
Sbjct: 534 DGAIWGSLLGACRVHGNVELGE 555
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 316/584 (54%), Gaps = 3/584 (0%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLINMYGKCGLLSSAQFVFDASLERN 141
+ +C GD R G+ +H R+ SG S ++N LI MY C L+SA +F A RN
Sbjct: 27 LQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRN 86
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS 201
++SW +L+S Q H L F R++GVA + F+ +S A A LG G Q+H
Sbjct: 87 AVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHC 146
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACE 261
+ + + + FVA L ++Y+KC L A RVF + D AW+A+I GYA+ G
Sbjct: 147 VGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEA 206
Query: 262 AIDLFVKMFSSGLMPSEV-TFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
A+ F M GL+ ++ F VL A +K+ + +H + K GF V N ++
Sbjct: 207 AVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALI 266
Query: 321 DFYSKCELLEESLKTFD-EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
D Y+K +E + + + +VVS ++I G++ + EA+ + ++ +G PN
Sbjct: 267 DMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNE 326
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
+T+S+++ + +E G Q H ++K + +GS LVDMY KCG ++ + ++F+
Sbjct: 327 FTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNE 386
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ + ++WN ++ +AQHG GREA++ + M + I+PN F+ +L+AC H GLV+EG
Sbjct: 387 IEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEG 446
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK 559
YF SM HGI P+ +H + ++ + G+ AY+FI PI+PN W LL C+
Sbjct: 447 LKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACR 506
Query: 560 THKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGC 619
LG AA+ ++ +P +T H+ LS +YA W++ VRK+M++ +KK G
Sbjct: 507 MRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGF 566
Query: 620 SWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
SW + K H F + ++ Q D++E + +L+ + + GY+PD
Sbjct: 567 SWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPD 610
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 218/453 (48%), Gaps = 24/453 (5%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
NHL+ MY + + A +LF MP RN +SW+ L+SG SQ M AL F M +
Sbjct: 60 NHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVA 119
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P + A A A+ G G ++H R G + V++ L +MY KCGLLS A V
Sbjct: 120 PTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRV 179
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG-VAISEFSCASVLGACAVLGN 192
FD ++++++W +++ Y + G + F ++ G V + SVL A L +
Sbjct: 180 FDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKD 239
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW-----S 247
+ IH V K E + V LI++YAK ++ ASRV D W +
Sbjct: 240 GWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLK----IDPGGWNVVSGT 295
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
++I GY + EA+ ++V++ G+ P+E TFS ++ A G QLH+ +IK
Sbjct: 296 SMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKT 355
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
+FV +T++D Y KC L+ S++ F+E++ ++WNA+I H EAI+
Sbjct: 356 DLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAF 415
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWG-------KQTHCCIVKPGFDSNVVIGSAL 420
M++ G PN + ++L S ++ G K+ H G + S +
Sbjct: 416 DRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAH------GIEPKEEHYSCI 469
Query: 421 VDMYAKCGRLNDARKVFDHLSSK-NLVSWNTML 452
+D Y + GRL++A K + K N W ++L
Sbjct: 470 IDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLL 502
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 224/464 (48%), Gaps = 44/464 (9%)
Query: 181 ASVLGACAVLGNLKVGMQIHS-LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
AS+L +C G+L+ G +H+ LV A F+A LI +Y+ C L A R+F+ +
Sbjct: 24 ASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMP 83
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+ L+ G +Q +A+ F M +G+ P+ S A A + + G Q
Sbjct: 84 RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQ 143
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH + +++GF + FVA+ + D YSKC LL E+ + FD+M + D V+W A+I G+ +
Sbjct: 144 LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 203
Query: 360 YGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
A+ +DM EG + + + ++L+ S + K HCC+ K GF+ V + +
Sbjct: 204 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN 263
Query: 419 ALVDMYAKCGRLNDARKVFD-HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
AL+DMYAK + A +V N+VS +M+ GY + EAL IY ++ ++
Sbjct: 264 ALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVE 323
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYF-----NSMIRD----------------------- 509
PN+ TF ++ C L+E+G +IRD
Sbjct: 324 PNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQL 383
Query: 510 -HGISPRMDHIA--SVVHLFACRGQTR---RAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+ I R D IA +V+++FA G R +A++ + S I PN + + LL+ C +H
Sbjct: 384 FNEIEYRTD-IAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTAC-SHAG 441
Query: 564 LVLGR----YAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
LV Y+ ++ +P++ ++ + Y A DE K
Sbjct: 442 LVDEGLKYFYSMKEAHGIEPKEEHYSCII-DTYGRAGRLDEAYK 484
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 179/353 (50%), Gaps = 4/353 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + ++L MY K +++A ++FD+MP+++ ++W+A+I G+++ G E A+ F
Sbjct: 152 GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSF 211
Query: 65 RLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
R M ++ + + + +SA D K IH + ++G EL V N LI+MY K
Sbjct: 212 RDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAK 271
Query: 124 CGLLSSAQFVFDASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
+ SA V N +S S++ Y + L I++ R+ GV +EF+ +S
Sbjct: 272 SMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSS 331
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
++ CA+ L+ G Q+H+ V K L D FV L+++Y KC + L+ ++F+ I+
Sbjct: 332 MIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRT 391
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG-RQLH 301
AW+A+I +AQ G EAI F +M SG+ P+ + F +L A + G + +
Sbjct: 392 DIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFY 451
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
S+ G + ++D Y + L+E+ K EM + + W +L+
Sbjct: 452 SMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA 504
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 306/591 (51%), Gaps = 36/591 (6%)
Query: 109 LNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLS 168
L H++ I +Y G L A+ +FD + + +W L+S+ + G + ++ +
Sbjct: 9 LPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDF 68
Query: 169 R-KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK 227
R K+ V + SV ACA L ++ ++H + D + LI++Y KC
Sbjct: 69 RHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRC 128
Query: 228 LDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ A VF + D+ +W+++ Y G EA+ F KM +G P+ VT S +L A
Sbjct: 129 SEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPA 188
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
D+K+ GR++H +++ G FV++ +++ Y+ C + ++ FD M D VSW
Sbjct: 189 CTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSW 248
Query: 348 NALIAGHL--ASCHYG---------------------------------EAIELLKDMLF 372
N LI + C G +A+E+L M
Sbjct: 249 NVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQN 308
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
G PN T +++L +++ ++ GKQ H I + F ++ +ALV MYAKCG L
Sbjct: 309 SGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLEL 368
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
+R+VF ++ ++ VSWNTM++ + HG G EAL ++ M ++ ++PN TF GVLS C H
Sbjct: 369 SRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSH 428
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
LV+EG F+SM RDH + P DH + +V + + G+ AYEFIK PIEP W
Sbjct: 429 SRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWG 488
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL GC+ +K++ LGR AA ++ + ++ +++LSN+ A +W E ++ RK+M+++
Sbjct: 489 ALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRG 548
Query: 613 LKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ K+ GCSW +++N++H F + Q +++ ++ + + GY+P+
Sbjct: 549 VTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPN 599
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 142/503 (28%), Positives = 235/503 (46%), Gaps = 61/503 (12%)
Query: 15 HLLLMYVK-FSRINDAQK---LFDEMPERNVISWSALISGFSQIGMPEVALNY---FRLM 67
HL L ++K +S D Q+ LFD++P+ ++ +W+ LIS ++ G A+ Y FR
Sbjct: 12 HLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHK 71
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
C +EP+ + ACAS D + K +H R G + + N LI+MYGKC
Sbjct: 72 NC--VEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCS 129
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A+ VF+ R+ ISW S+ S Y CG L F +G + + +S+L AC
Sbjct: 130 EGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPAC 189
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL---- 243
L +LK G ++H V + + + FV+ L+N+YA C + A VF ++ D
Sbjct: 190 TDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWN 249
Query: 244 -------------------------------TAWSALIGGYAQLGKACEAIDLFVKMFSS 272
+W+A+IGG Q G+ +A+++ +M +S
Sbjct: 250 VLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNS 309
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G P+++T + VL A +++ GG+Q+H I + F ++ Y+KC LE S
Sbjct: 310 GFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELS 369
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
+ F M + D VSWN +I + EA+ L ++M+ G PN T++ +L+ S
Sbjct: 370 RRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHS 429
Query: 393 PAIEWG-------KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
++ G + H V+P D + S +VD+ ++ GRL +A + + +
Sbjct: 430 RLVDEGLLIFDSMSRDHS--VEPDADHH----SCMVDVLSRAGRLEEAYEFIKKMPIEPT 483
Query: 446 V-SWNTMLVG---YAQHGLGREA 464
+W +L G Y LGR A
Sbjct: 484 AGAWGALLGGCRVYKNVELGRIA 506
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 203/439 (46%), Gaps = 69/439 (15%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF +V+ N L+ MY K A+ +F+ MP R+VISW+++ S + G+ AL
Sbjct: 105 IRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREAL 164
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
FR M PN T + AC D +SG+E+HG + R+G+ N VS+ L+NMY
Sbjct: 165 GAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMY 224
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF---------------- 165
C + AQ VFD+ R+++SW L+++Y E GL +F
Sbjct: 225 ASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWN 284
Query: 166 -----------------LLSR--KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+LSR SG ++ + SVL AC L +L+ G QIH +F+
Sbjct: 285 AVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRH 344
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
D L+ +YAKC L+L+ RVFS + D +W+ +I + G EA+ LF
Sbjct: 345 WFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLF 404
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA---------- 316
+M SG+ P+ VTF+ VL + HS ++ G F ++
Sbjct: 405 REMVDSGVRPNSVTFTGVLSGCS-----------HSRLVDEGLLIFDSMSRDHSVEPDAD 453
Query: 317 --NTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLK---DM 370
+ ++D S+ LEE+ + +M E +W AL+ G C + +EL + +
Sbjct: 454 HHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG----CRVYKNVELGRIAANR 509
Query: 371 LFEGHCPNLYTY---SNIL 386
LFE N Y SNIL
Sbjct: 510 LFEIESDNPGNYVLLSNIL 528
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 37/289 (12%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALIS----------- 49
++ +G NV + L+ MY I AQ +FD M R+ +SW+ LI+
Sbjct: 205 VVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKG 264
Query: 50 ------------------------GFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSA 85
G Q G E AL M +PN T + A
Sbjct: 265 LSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPA 324
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
C + R GK+IHG ++R + + L+ MY KCG L ++ VF +R+++SW
Sbjct: 325 CTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSW 384
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQI-HSLVF 204
+++ + G L +F SGV + + VL C+ + G+ I S+
Sbjct: 385 NTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSR 444
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALIGG 252
++E D ++++ ++ +L+ A + + P AW AL+GG
Sbjct: 445 DHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493
>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 181/627 (28%), Positives = 328/627 (52%), Gaps = 5/627 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + L+ Y K + A ++FD MP RN +W+A+I G G A
Sbjct: 79 VLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEA 138
Query: 61 LNYFRLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEI----HGRMYRSGLELNSHVSN 115
L F MV + + +TY + ACA+ G G+++ + N V
Sbjct: 139 LEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVETDIASGNARPNVFVQC 198
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
L++M+ KCG L A+ VF++ R+ +W +++ G + + +F R G +
Sbjct: 199 ALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGV 258
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
A+V+ AC G L+VG +H K D +V+ L+++Y KC +++A +F
Sbjct: 259 DSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLF 318
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ D+ +WS+LI GY+Q G ++ LF +M S G+ P+ T + +L + +K
Sbjct: 319 WSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIR 378
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+++H I+ G FV + ++D YSK L+ + F + D+ WN+++AG+
Sbjct: 379 SGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYA 438
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+ + A L+ + G P+ T ++L + + + GK+ H ++K +S
Sbjct: 439 VNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCS 498
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ +AL+DMY KCG L A++VF ++ +N V++N ++ + +H +AL + +M+ +
Sbjct: 499 VNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDG 558
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
I P+ TF+ +LS C H GL+++G H ++SM+ D+ ISP +H + +V L++ G+ A
Sbjct: 559 IAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEA 618
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
+ F+ + EP V LL+ C+ H + + ++I +P D HI+LSN+YA+A
Sbjct: 619 WCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADA 678
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWT 622
MW + ++R +++E++LKK+TG S T
Sbjct: 679 GMWSDVTRIRTMIQERNLKKETGNSLT 705
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 5/208 (2%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
R+LH+ ++ G T + ++ Y+K + +L+ FD M + +WNA+I G +
Sbjct: 72 ARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVD 131
Query: 357 SCHYGEAIELLKDMLFEGHCP-NLYTYSNILNISSDIPAIEWGKQ----THCCIVKPGFD 411
+ + EA+E+ M+ +G + +TY ++ + + A+ G++ I
Sbjct: 132 AGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVETDIASGNAR 191
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
NV + ALVDM+AKCG L++AR VF+ + ++L +W M+ G G E +++++ M
Sbjct: 192 PNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHM 251
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ + V+SAC G ++ G
Sbjct: 252 RSEGFGVDSLIAATVISACGRAGELQVG 279
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 11/172 (6%)
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
P + ++ H ++ G V+ + LV YAK G + A +VFD + +N +WN ++
Sbjct: 67 PDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVI 126
Query: 453 VGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEG---WHYFNSMIR 508
G G EALE++ M+ + + + T+ V+ AC +G V +G W + I
Sbjct: 127 KGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVETDIA 186
Query: 509 DHGISPRMDHIASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
P + ++V +FA C + R +E ++ + W ++ G
Sbjct: 187 SGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDL----AAWTAMIGG 234
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 292/534 (54%), Gaps = 13/534 (2%)
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI--SEFSCASVLGACAVLGNLKVGMQ 198
N SW S+++ + G+ V L+ F RK + S F CA + +C+ L +L G Q
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCA--IKSCSALLDLHSGRQ 173
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
H E D FV+ L+++Y+KC +L A +F I ++ +W+++I GY Q
Sbjct: 174 AHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDD 233
Query: 259 ACEAIDLFVKMF-----SSG---LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
A A+ LF + S G + + VL A + V E +H +IK GF
Sbjct: 234 AHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFE 293
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
V NT++D Y+KC L S + FD M E DV+SWN++IA + + E++E+ M
Sbjct: 294 GDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRM 353
Query: 371 LFEGHCP-NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
+ +G N T S +L + + GK H ++K G +SNV +G++++DMY KCG+
Sbjct: 354 VKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGK 413
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ ARK FD + KN+ SW+ M+ GY HG +EALE++ M +KPN TF+ VL+A
Sbjct: 414 VEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAA 473
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C H GL+EEGWH+F +M + + P ++H +V L G + A++ IK + P+ V
Sbjct: 474 CSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFV 533
Query: 550 VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK 609
VW LL C+ HK++ LG +A K+ DP++ +++LSN+YA+A W++ ++R +MK
Sbjct: 534 VWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMK 593
Query: 610 EKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
L K G S +++ ++H F Q ++E + +LS+ L + GYVPD
Sbjct: 594 NSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPD 647
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 231/453 (50%), Gaps = 20/453 (4%)
Query: 22 KFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYV 80
++S + LF++ ++ NV SW+++I+ ++ G AL F M L+PN T+
Sbjct: 97 RYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFP 156
Query: 81 GAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
A+ +C++ D SG++ H + G E + VS+ L++MY KCG L A+ +FD R
Sbjct: 157 CAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHR 216
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSG------VAISEFSCASVLGACAVLGN 192
N +SW S+++ Y Q + L +F L +SG V + + SVL AC+ +
Sbjct: 217 NIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSE 276
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+ +H + K E D V L++ YAKC +L ++ RVF + D+ +W+++I
Sbjct: 277 KSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAV 336
Query: 253 YAQLGKACEAIDLFVKMFSSGLMP-SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
YAQ G + E++++F +M G + + VT S VL A A G+ +H +IKMG S
Sbjct: 337 YAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLES 396
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
FV +++D Y KC +E + K FD M E +V SW+A++AG+ H EA+E+ +M
Sbjct: 397 NVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMN 456
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVVIGSALVDMYAK 426
G PN T+ ++L S +E G +H V+PG + +VD+ +
Sbjct: 457 MAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHY----GCMVDLLGR 512
Query: 427 CGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH 458
G L +A + + + + V W +L H
Sbjct: 513 AGYLKEAFDLIKGMKLRPDFVVWGALLGACRMH 545
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 207/415 (49%), Gaps = 46/415 (11%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF P++ + L+ MY K + DA+ LFDE+ RN++SW+++I+G+ Q AL F
Sbjct: 182 GFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLF 241
Query: 65 RLMV-----------CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV 113
+ + CV +P V +SAC+ + + +HG + + G E + V
Sbjct: 242 KEFLVEESGSEGDGEVCV-DP--IAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGV 298
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG- 172
N L++ Y KCG L ++ VFD ER+ ISW S+++ Y Q G ++IF K G
Sbjct: 299 ENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGE 358
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+ + + ++VL ACA G+ ++G IH V K LE + FV +I++Y KC K+++A
Sbjct: 359 INYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMAR 418
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
+ F ++ ++ +WSA++ GY G A EA+++F +M +G+ P+ +TF VL A +
Sbjct: 419 KAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACS--- 475
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD 340
H+ +++ G+ F +++ ++D + L+E+ M
Sbjct: 476 --------HAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMK 527
Query: 341 -EHDVVSWNALIAGHLASCHYGEAI---ELLKDMLFEGHCPNLYTYSNILNISSD 391
D V W AL L +C + + E+ LFE N Y + NI +D
Sbjct: 528 LRPDFVVWGAL----LGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYAD 578
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 15/261 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF ++ N L+ Y K + ++++FD M ER+VISW+++I+ ++Q GM +
Sbjct: 287 LIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTES 346
Query: 61 LNYFRLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ F MV + N T + ACA G R GK IH ++ + GLE N V +I+
Sbjct: 347 MEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIID 406
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG + A+ FD E+N SW ++++ Y G L++F +GV + +
Sbjct: 407 MYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYIT 466
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKC-ALEFDKFVAMG------LINLYAKCEKLDLAS 232
SVL AC+ G L+ G FK + EFD V G +++L + L A
Sbjct: 467 FVSVLAACSHAGLLEEGWHW----FKAMSHEFD--VEPGVEHYGCMVDLLGRAGYLKEAF 520
Query: 233 RVFSNIQL-PDLTAWSALIGG 252
+ ++L PD W AL+G
Sbjct: 521 DLIKGMKLRPDFVVWGALLGA 541
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 152/337 (45%), Gaps = 64/337 (18%)
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
+D+ +V SWN++IA S EA+ M PN T+ + S + + G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
+Q H + GF+ ++ + SALVDMY+KCG L DAR +FD +S +N+VSW +M+ GY Q+
Sbjct: 172 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 231
Query: 459 GLGREALEIYS--MMQENKIKPNDNT------FIGVLSACVHIG--LVEEGWHYF----- 503
AL ++ +++E+ + + + VLSAC + + EG H F
Sbjct: 232 DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG 291
Query: 504 --------NSMIRDH------GISPRM-DHIA--------SVVHLFACRGQTRRAYEF-- 538
N+++ + G+S R+ D +A S++ ++A G + + E
Sbjct: 292 FEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFH 351
Query: 539 --IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+K I N V +L C LG+ ++++ E SNV+ +
Sbjct: 352 RMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLE--------SNVFVGTS 403
Query: 597 MWDETAKVRKI---------MKEKSLKKDTGCSWTEL 624
+ D K K+ M+EK++K SW+ +
Sbjct: 404 IIDMYCKCGKVEMARKAFDRMREKNVK-----SWSAM 435
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 81/186 (43%), Gaps = 14/186 (7%)
Query: 387 NISSDIPAIEWGKQ------THCCIVKPGFDS--NVVIGSALVDMYAKCGRLNDARKVFD 438
++S D+P ++ Q H GF ++ G+ L Y+ L +F+
Sbjct: 53 SVSRDLPNVQITAQHFLIFPEHTAFQFSGFSKRRSICAGAVLRRRYSNNPNLT---TLFN 109
Query: 439 -HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
++ N+ SWN+++ A+ G EAL +S M++ +KPN +TF + +C + +
Sbjct: 110 KYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLH 169
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G + G P + +++V +++ G+ R A N V W +++G
Sbjct: 170 SGRQAHQQAL-IFGFEPDLFVSSALVDMYSKCGELRDARTLFDEIS-HRNIVSWTSMITG 227
Query: 558 CKTHKD 563
+ D
Sbjct: 228 YVQNDD 233
>gi|302810303|ref|XP_002986843.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
gi|300145497|gb|EFJ12173.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
Length = 845
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 192/592 (32%), Positives = 313/592 (52%), Gaps = 13/592 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ + + + + N + M+ K ++ A +F M +V SW+A+++ +Q G A
Sbjct: 250 VVEAEWETDTMVANASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEA 309
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M V + T V A+S CA+ GK IH R+ R GLE + L+ M
Sbjct: 310 LELFRRMPSEV-AVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTM 368
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE-HVHGLKIFLLSRKSGVAISEFS 179
Y +CG L A+ VFD L +N +SW +++++Y + H L+IF L GV + +
Sbjct: 369 YSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTT 428
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+V+ A VG Q+H + L D F+ L+N+Y + L A RVF I
Sbjct: 429 ALNVVSAVECQ---SVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKII 485
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ AW+A++G G+ EA++ F +M G + TF L A + + + G R+
Sbjct: 486 ERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAVSPDRVSYG-RK 544
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG--HLAS 357
LH LI + G + VAN ++ Y++C+ LE++ TFD +++ +VSW ++IA L S
Sbjct: 545 LHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGS 604
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
C EAI+L + M E P+ T++ +L + + A GK H + G +SNV +
Sbjct: 605 CQ--EAIDLFQRMELE---PDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVA 659
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL+ M++K G L +AR++F+ + + L WN ML GYAQ G + ++ + MQ+ +
Sbjct: 660 TALIHMHSKFGNLGEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVA 719
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ TF+ V+SAC H GLVE+G F SM D+G+ ++ ++ L A GQ AY+
Sbjct: 720 PDHITFLAVVSACSHAGLVEKGARTFASMGPDYGVGHGLEDYGCLIDLLARAGQLEEAYD 779
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
F++ P P+ V W+ LL+ CK D+ G AA ++ +P +A + LS
Sbjct: 780 FLQGMPCGPSDVTWKTLLAACKIQGDVRRGSAAARSVIEREPYGAAAFVELS 831
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/562 (28%), Positives = 286/562 (50%), Gaps = 22/562 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +V+ N L+ M K ++ A + F MP R+VISW+ +++ +++ G A
Sbjct: 152 IVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGHIAEA 211
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
Y+ M+ + PN T++ ++AC+S AR ++G + + E ++ V+N INM
Sbjct: 212 FGYYLRMLLEGVVPNNITFLAVLAACSS---ARDADLVYGNVVEAEWETDTMVANASINM 268
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ KCG L A VF + SW +++++ Q G L++F S VA+ + +
Sbjct: 269 FSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELF-RRMPSEVAVDKTTL 327
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
L CA +L+ G IHS V + LE D L+ +Y++C L A RVF I
Sbjct: 328 VIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDGILG 387
Query: 241 PDLTAWSALIGGYAQLGKA-CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+ +I Y + A+++F M G+ P+ T V+ A V+ G+Q
Sbjct: 388 KNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSA---VECQSVGKQ 444
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH I+ G S +F+ + +++ Y + L ++ + F+++ E DV +WNA++ +
Sbjct: 445 LHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQ 504
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP-AIEWGKQTHCCIVKPGFDSNVVIGS 418
EA+E ML EG N T+ +L +S+ P + +G++ H I + G +++ + +
Sbjct: 505 PREALEWFSRMLLEGASGNRATF--LLALSAVSPDRVSYGRKLHGLIAESGLEADNNVAN 562
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+ MYA+C L DAR FD L K++VSW +++ G +EA++++ M+ ++P
Sbjct: 563 ALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRME---LEP 619
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL---FACRGQTRRA 535
+ TF VL AC + EG +S R+ G+ + +++H+ F G+ RR
Sbjct: 620 DRVTFTTVLEACTIVSAHREG-KLVHSRARELGLESNVFVATALIHMHSKFGNLGEARRI 678
Query: 536 YEFIKSSPIEPNKVVWRCLLSG 557
+E +++ P W +L G
Sbjct: 679 FEAVEA----PTLACWNAMLGG 696
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 279/584 (47%), Gaps = 62/584 (10%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGF-SQIGMPEVALNYFRLMVCCVLEP 74
++ M++K I+DA ++F++M +R+++ W+++++ F + L +FR+ + VL P
Sbjct: 69 VVRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVL-P 127
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
+ T++ ++AC S G+ +H + LE + + N L+ M KC L A F
Sbjct: 128 DRVTFISILNACESLA---QGELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFF 184
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
R+ ISW ++++Y + G +L GV + + +VL AC+ +
Sbjct: 185 QRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDAD 244
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
+ ++ V + E D VA IN+++KC LD A VF ++ D+ +W+A++ A
Sbjct: 245 L---VYGNVVEAEWETDTMVANASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALA 301
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEV-----TFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
Q G + EA++LF + MPSEV T L A + G+ +HS + ++G
Sbjct: 302 QHGFSSEALELFRR------MPSEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGL 355
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA--GHLASCHYGEAIELL 367
+ ++ YS+C L E+ + FD + +VVSWN +IA G S H A+E+
Sbjct: 356 ETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLH-SRALEIF 414
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+ ML +G P T + LN+ S + GKQ H IV G S+ IGSALV+MY +
Sbjct: 415 RLMLLDGVRP---TRTTALNVVSAVECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERT 471
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G L DAR+VF+ + +++ +WN ++ HG REALE +S M N TF+ L
Sbjct: 472 GSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLAL 531
Query: 488 SAC----------VHIGLVEEGWHYFNSM-----------------------IRDHGISP 514
SA +H + E G N++ + D I
Sbjct: 532 SAVSPDRVSYGRKLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVS 591
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
IA+ V L +C + A + + +EP++V + +L C
Sbjct: 592 WTSVIAACVDLGSC----QEAIDLFQRMELEPDRVTFTTVLEAC 631
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 240/493 (48%), Gaps = 23/493 (4%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
++ ++ V+ CA R ++ + G+ L+ ++ M+ KC + A VF
Sbjct: 27 DHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVF 86
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
+ L+R+ + W S+++++ + F + GV + S+L AC L
Sbjct: 87 EQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRVTFISILNACESLAQ-- 144
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G +H L+ LE D + L+ + AKC LD A+R F + D+ +W+ ++ YA
Sbjct: 145 -GELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYA 203
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
+ G EA +++M G++P+ +TF VL A + ++ ++ +++ + + T
Sbjct: 204 RNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARD---ADLVYGNVVEAEWETDTM 260
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
VAN ++ +SKC L+ + F M DV SWNA++A EA+EL + M E
Sbjct: 261 VANASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSE- 319
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
+ T L+ + ++E GK H + + G +++VV G+ALV MY++CG L +AR
Sbjct: 320 VAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEAR 379
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQ-HGLGREALEIYSMMQENKIKPNDNTFIGVLSA--CV 491
+VFD + KN+VSWN M+ Y + L ALEI+ +M + ++P T + V+SA C
Sbjct: 380 RVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVECQ 439
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF---ACRGQTRRAYEFIKSSPIEPNK 548
+G GW + D I +++V+++ G RR +E I IE +
Sbjct: 440 SVGKQLHGWIVDTGLYSDSFIG------SALVNMYERTGSLGDARRVFEKI----IERDV 489
Query: 549 VVWRCLLSGCKTH 561
W ++ C H
Sbjct: 490 FAWNAIVGVCVGH 502
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 143/336 (42%), Gaps = 35/336 (10%)
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
++S I G F +V+ + KC + ++ + F++M + +V W +++ +
Sbjct: 50 VYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDED 109
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
A M EG P+ T+ +ILN + G+ H IV +S+VVIG+A
Sbjct: 110 VDRAWLFFFRMQLEGVLPDRVTFISILNACESLAQ---GELVHRLIVDKNLESDVVIGNA 166
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+ M AKC L+ A + F + ++++SW M+ YA++G EA Y M + PN
Sbjct: 167 LMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPN 226
Query: 480 DNTFIGVLSAC--------VHIGLVEEGWHYFNSMI---------------RDHGISPRM 516
+ TF+ VL+AC V+ +VE W ++M+ R H + RM
Sbjct: 227 NITFLAVLAACSSARDADLVYGNVVEAEWET-DTMVANASINMFSKCGCLDRAHDVFHRM 285
Query: 517 DHIA-----SVVHLFACRGQTRRAYEFIKSSPIE--PNKVVWRCLLSGCKTHKDLVLGRY 569
++V A G + A E + P E +K LS C + L G+
Sbjct: 286 KRWDVKSWNAMVAALAQHGFSSEALELFRRMPSEVAVDKTTLVIALSTCAAPESLEDGKS 345
Query: 570 AAEKILSTDPE-DTSAHIMLSNVYAEANMWDETAKV 604
++ E D A L +Y+ E +V
Sbjct: 346 IHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRV 381
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 200/634 (31%), Positives = 327/634 (51%), Gaps = 3/634 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + + L+ Y KF I+ +K+FD M +RNV+ W+ +I +S+ G ++A
Sbjct: 75 VVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIA 134
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F+ M ++P T V +S +H + G E + +SN ++NM
Sbjct: 135 FSMFKQMRESGIQP---TSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNM 191
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG ++ A+ +F++ R+ +SW SLLS+Y + G L++ + + + +
Sbjct: 192 YGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S L A A+ G+L++G +H L+ K L D+ V L+ LY +C LD A +VF +
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+A+I G Q A +A+ +F +M S + PS T + L A A + G +
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +++ G N+++ Y+KC L++S F++M E D+VSWNA++AGH + +
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ I +M P+ T +++L A+ GK H +++ ++ +AL
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 491
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMY KCG L +A+K FD + ++LV+W+T++VGY +G G AL YS ++PN
Sbjct: 492 VDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNH 551
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
FI VLSAC H GL+ +G + SM +D +SP ++H A VV L + G+ AY F K
Sbjct: 552 VIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYK 611
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
EP+ VV LL C+ + + LG+ A + P D + L+N YA + WD
Sbjct: 612 MMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYASMSRWDG 671
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTS 634
K M+ LKK G S E+ F S
Sbjct: 672 VEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFAS 705
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 252/515 (48%), Gaps = 5/515 (0%)
Query: 43 SWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM 102
S+++L+S S G L + M + + YT+ AC + G +H +
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 103 YRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGL 162
+GL +S++ + LI+ Y K G + + VFD L+RN + W +++ SY + G+
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 163 KIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
+F R+SG+ + + S+L + L + + +H L+ E D ++ ++N+Y
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMY 192
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
KC ++ A R+F +I D+ +W++L+ Y+++G E + L M + P + TF
Sbjct: 193 GKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
L A A + G+ +H L++K G + V + ++ Y +C L+ + K F E
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEK 312
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
DVV W A+I+G + + +A+ + M+ P+ T ++ L + + + G H
Sbjct: 313 DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIH 372
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
+++ G ++ ++LV MYAKC +L + +F+ + K+LVSWN ++ G+A++G
Sbjct: 373 GYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLS 432
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
+ + ++ M+++ ++P+ T +L AC G + +G N ++R I M A V
Sbjct: 433 KGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALV 492
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
F C G A + ++ + V W L+ G
Sbjct: 493 DMYFKC-GNLENAQKCFDCM-LQRDLVAWSTLIVG 525
>gi|302766669|ref|XP_002966755.1| hypothetical protein SELMODRAFT_85926 [Selaginella moellendorffii]
gi|300166175|gb|EFJ32782.1| hypothetical protein SELMODRAFT_85926 [Selaginella moellendorffii]
Length = 811
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 196/621 (31%), Positives = 321/621 (51%), Gaps = 12/621 (1%)
Query: 16 LLLMYVKFSRINDAQKLFDE--MPERNVISWSALISGFSQIGMPEVALN-YFRLMVCCVL 72
L+ MY K ++DA+++FD+ + + + W+A++SG++ G AL Y R +
Sbjct: 66 LVDMYSKCGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELYQRFLSVSSE 125
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P+ + A++AC+S G+ IH ++ L+ ++H+ N L+NMYG+C L A+
Sbjct: 126 PPDTVMLLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGRCKELHRARK 185
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
F+ +N +SW ++ +Y Q G H +++F GVA + VL AC +
Sbjct: 186 AFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFLHVLDACGGVEA 245
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+IH + LE+D FVA L+N Y KC L A RVF + L + ++++
Sbjct: 246 AGDVRRIHKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTMPLKNTVTMTSMLAA 305
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF--S 310
YAQ G EA++++ +M S G VTF L A + + GR +HS ++ G
Sbjct: 306 YAQHGLGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQGRAIHSRLLVSGIIQQ 365
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EAIELLKD 369
+ +L+ Y +C +L+ + FD M + + ++WNAL+ G A YG EA+ L
Sbjct: 366 PDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTITWNALM-GSYAQWGYGKEALNLYHS 424
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M + PN T+ +L S + A+ G+ H + GF+ V +G ALV+MY KCG
Sbjct: 425 MDAQ---PNSLTFLAMLTACSTVGALLQGRAAHARLAPAGFEKEVEVGVALVNMYGKCGS 481
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L DA F L K +V+W ++ A HG RE L +++ M+ + + P+ + L A
Sbjct: 482 LEDALGTFAKLERKTVVTWTVAMLALAHHGEFRETLRLFTEMELDGVAPDSVALLAALFA 541
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C H G ++EG YF +MI+D+G+SP + H VV L G RA E I S P EP+ V
Sbjct: 542 CSHSGKLKEGRSYFTNMIQDYGVSPTLAHYDCVVDLLCRTGLLGRAEELIDSMPFEPSAV 601
Query: 550 VWRCLLSGCKTHKDLV-LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
W LL+ C+TH L + AA+K L T+P + + LS +Y+ + + ++
Sbjct: 602 TWTTLLAACRTHSTLYDKAKVAADKALETEPHNAGIYFALSYMYSGVRTYRQE-RLNVSD 660
Query: 609 KEKSLKKDTGCSWTELQNKMH 629
K S+++ G + E +N++H
Sbjct: 661 KLNSIQRQVGRCFIETRNQIH 681
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 232/441 (52%), Gaps = 25/441 (5%)
Query: 80 VGAVSACASRGDA--RSGKEIHGRM---YRSGL----------ELNSHVSNCLINMYGKC 124
V ++SACA G A G+E+H R +R G E + V+ L++MY KC
Sbjct: 14 VSSISACARLGSAFLSQGRELHERYCQWWRRGGGGEVAVAVAGEEDDLVATALVDMYSKC 73
Query: 125 GLLSSAQFVFDA-SLERNSIS-WVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSC 180
G L A+ VFD S++ ++ W +++S Y G L+++ LS S
Sbjct: 74 GSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELYQRFLS-VSSEPPDTVML 132
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S + AC+ L G IH+ + L+ + GL+N+Y +C++L A + F I
Sbjct: 133 LSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGRCKELHRARKAFEKITA 192
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L +W+ +IG YAQ G A++LF +M G+ VTF +VL A V+ R++
Sbjct: 193 KNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFLHVLDACGGVEAAGDVRRI 252
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + G FVA+++++ Y KC L E+ + FD M + V+ +++A +
Sbjct: 253 HKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTMPLKNTVTMTSMLAAYAQHGLG 312
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF--DSNVVIGS 418
EA+E+ ++M +G + T+ + L+ S I A+ G+ H ++ G +VV+G+
Sbjct: 313 EEALEIYREMESQGRKADRVTFISALDACSSIGALSQGRAIHSRLLVSGIIQQPDVVLGT 372
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL++MY +CG L+ A+ +FD ++ KN ++WN ++ YAQ G G+EAL +Y M +P
Sbjct: 373 ALLNMYGRCGVLDAAKSLFDGMADKNTITWNALMGSYAQWGYGKEALNLYHSMD---AQP 429
Query: 479 NDNTFIGVLSACVHIGLVEEG 499
N TF+ +L+AC +G + +G
Sbjct: 430 NSLTFLAMLTACSTVGALLQG 450
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 228/503 (45%), Gaps = 58/503 (11%)
Query: 172 GVAISEFSCASVLGACAVLGN--LKVGMQIHS-------------LVFKCALEFDKFVAM 216
GV S + S + ACA LG+ L G ++H + A E D VA
Sbjct: 5 GVPRSASNLVSSISACARLGSAFLSQGRELHERYCQWWRRGGGGEVAVAVAGEEDDLVAT 64
Query: 217 GLINLYAKCEKLDLASRVFSN--IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS-SG 273
L+++Y+KC LD A RVF + + + W+A++ GYA G + +A++L+ + S S
Sbjct: 65 ALVDMYSKCGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELYQRFLSVSS 124
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
P V + A + + GR +H+ I T + N +++ Y +C+ L +
Sbjct: 125 EPPDTVMLLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGRCKELHRAR 184
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
K F+++ ++VSWN +I + H G A+EL + M EG + T+ ++L+ +
Sbjct: 185 KAFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFLHVLDACGGVE 244
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
A ++ H + G + +V + S+LV+ Y KCG L +A++VFD + KN V+ +ML
Sbjct: 245 AAGDVRRIHKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTMPLKNTVTMTSMLA 304
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
YAQHGLG EALEIY M+ K + TFI L AC IG + +G +S + GI
Sbjct: 305 AYAQHGLGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQG-RAIHSRLLVSGII 363
Query: 514 PRMDHIASVVHL---------------------------------FACRGQTRRAYEFIK 540
+ D + L +A G + A
Sbjct: 364 QQPDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTITWNALMGSYAQWGYGKEALNLYH 423
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE-DTSAHIMLSNVYAEANMWD 599
S +PN + + +L+ C T L+ GR A ++ E + + L N+Y + +
Sbjct: 424 SMDAQPNSLTFLAMLTACSTVGALLQGRAAHARLAPAGFEKEVEVGVALVNMYGKCGSLE 483
Query: 600 ETAKVRKIMKEKSLKKDTGCSWT 622
+ + L++ T +WT
Sbjct: 484 DA-----LGTFAKLERKTVVTWT 501
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 198/422 (46%), Gaps = 23/422 (5%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG +V + L+ Y K + +A+++FD MP +N ++ +++++ ++Q G+ E AL
Sbjct: 259 SGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTMPLKNTVTMTSMLAAYAQHGLGEEALEI 318
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV--SNCLINMY 121
+R M + + T++ A+ AC+S G G+ IH R+ SG+ V L+NMY
Sbjct: 319 YREMESQGRKADRVTFISALDACSSIGALSQGRAIHSRLLVSGIIQQPDVVLGTALLNMY 378
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
G+CG+L +A+ +FD ++N+I+W +L+ SY Q G +G + L + +
Sbjct: 379 GRCGVLDAAKSLFDGMADKNTITWNALMGSYAQWG---YGKEALNLYHSMDAQPNSLTFL 435
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
++L AC+ +G L G H+ + E + V + L+N+Y KC L+ A F+ ++
Sbjct: 436 AMLTACSTVGALLQGRAAHARLAPAGFEKEVEVGVALVNMYGKCGSLEDALGTFAKLERK 495
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-L 300
+ W+ + A G+ E + LF +M G+ P V L A + + GR
Sbjct: 496 TVVTWTVAMLALAHHGEFRETLRLFTEMELDGVAPDSVALLAALFACSHSGKLKEGRSYF 555
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCH 359
++I G S + V+D + LL + + D M E V+W L+A
Sbjct: 556 TNMIQDYGVSPTLAHYDCVVDLLCRTGLLGRAEELIDSMPFEPSAVTWTTLLAACRTHST 615
Query: 360 YGEAIELLKDMLFEGHCPNL-------YTYSNI-------LNISSDIPAIEWGKQTHCCI 405
+ ++ D E N Y YS + LN+S + +I+ +Q C
Sbjct: 616 LYDKAKVAADKALETEPHNAGIYFALSYMYSGVRTYRQERLNVSDKLNSIQ--RQVGRCF 673
Query: 406 VK 407
++
Sbjct: 674 IE 675
>gi|449445246|ref|XP_004140384.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Cucumis sativus]
Length = 688
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 203/654 (31%), Positives = 322/654 (49%), Gaps = 38/654 (5%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N+L+ MY +F + DA+K+FDEM +RN+++W+ ++S F+ G P A+ + M
Sbjct: 37 DVFLANNLISMYAEFFNVRDAEKVFDEMTDRNIVTWTTMVSAFTDGGRPYEAIRLYNDMP 96
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
PN Y Y + AC GD GK I R+Y L+ ++ + N L++M+ KCG L+
Sbjct: 97 KSE-TPNGYMYSAVLKACGFVGDLGLGKLIQERIYEDKLQADTILMNSLMDMFVKCGSLN 155
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF----------------------- 165
A VF + +W ++S Y + G V K+F
Sbjct: 156 DAVEVFHNISRATTTTWNIIVSGYSKAGLMVEAEKLFHCMPHPNVVSWNSMIAGFADNGS 215
Query: 166 -------LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
+ K + + +F+ L A+ G L +G Q+HS V K E F L
Sbjct: 216 QRALEFVSMMHKRCIKLDDFTFPCALKISALHGLLFIGKQVHSYVTKLGYESSCFTLSAL 275
Query: 219 INLYAKCEKLDLASRVFS-----NIQLPD-LTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
I++Y+ C L A ++F N + D L W++++ GY A++L ++ S
Sbjct: 276 IDMYSNCNDLIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCS 335
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G + TF L ++ G QLH LI+ G+ V + ++D Y+K ++++
Sbjct: 336 GALLDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDA 395
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
L F + D+++W+ LI G A + K ML + + + S IL + S++
Sbjct: 396 LAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNL 455
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
++ GKQ H VK G++ ++L+DMY+KCG + DA +F K++VSW ++
Sbjct: 456 ASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGII 515
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
VG Q+G EA+ + M + I PN+ TF+GVLSAC + GLVEE FNSM +G+
Sbjct: 516 VGCGQNGKAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVEEARSIFNSMKSVYGL 575
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
P ++H +V L A G A + I + P EPN+ WR LL C T D L A+
Sbjct: 576 EPHLEHYCCMVDLLASVGLPEEAEKLIANMPFEPNQTTWRTLLGACGTRNDTKLINRVAD 635
Query: 573 KILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
+L P D S ++ LSN YA MW +K R+ K+ +KK G SW E+ +
Sbjct: 636 GLLEATPNDPSTYVTLSNAYASLGMWHTLSKAREASKKFGIKK-AGLSWIEVSS 688
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 133/547 (24%), Positives = 251/547 (45%), Gaps = 78/547 (14%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
CA+ + G IH + + G + ++N LI+MY + + A+ VFD +RN ++W
Sbjct: 13 CATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNIVTW 72
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+++S++ G ++++ KS + + ++VL AC +G+L +G I +++
Sbjct: 73 TTMVSAFTDGGRPYEAIRLYNDMPKSETP-NGYMYSAVLKACGFVGDLGLGKLIQERIYE 131
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
L+ D + L++++ KC L+ A VF NI T W+ ++ GY++ G EA
Sbjct: 132 DKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEA--- 188
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADV-------------KETIG---------------- 296
K+F P+ V+++ ++ FAD K I
Sbjct: 189 -EKLFHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKISALH 247
Query: 297 -----GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD------EHDVV 345
G+Q+HS + K+G+ S F + ++D YS C L E++K FD+ ++
Sbjct: 248 GLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLA 307
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
WN++++G++ + A+ LL ++ G + YT+ L + ++ + G Q H I
Sbjct: 308 LWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLI 367
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
V G++ + V+GS LVD+YAK ++DA +F L K++++W+ +++G AQ GL A
Sbjct: 368 VTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAF 427
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD------HGISPRMD-- 517
++ M E + + +L C ++ + G ++ I+ +D
Sbjct: 428 SMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMY 487
Query: 518 ----HIASVVHLFACR---------------GQTRRAYEFIK------SSPIEPNKVVWR 552
I + LF C GQ +A E ++ S I PN++ +
Sbjct: 488 SKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFL 547
Query: 553 CLLSGCK 559
+LS C+
Sbjct: 548 GVLSACR 554
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 186/393 (47%), Gaps = 13/393 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE------RNVISWSALISGFSQIGMPE 58
G+ + T + L+ MY + + +A KLFD+ N+ W++++SG+ +
Sbjct: 264 GYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQ 323
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
ALN + C + YT+ GA+ C + R G ++HG + G EL+ V + L+
Sbjct: 324 AALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILV 383
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
++Y K + A +F ++ I+W L+ Q G + +F + I F
Sbjct: 384 DLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHF 443
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+++L C+ L +L+ G Q+H+L K E + F L+++Y+KC +++ A +F
Sbjct: 444 VISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCE 503
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA--FADVKETIG 296
Q D+ +W+ +I G Q GKA EA+ F +M SG+ P+E+TF VL A +A + E
Sbjct: 504 QEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVEE-- 561
Query: 297 GRQL-HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGH 354
R + +S+ G ++D + L EE+ K M E + +W L+ G
Sbjct: 562 ARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIANMPFEPNQTTWRTLL-GA 620
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
+ + + I + D L E + TY + N
Sbjct: 621 CGTRNDTKLINRVADGLLEATPNDPSTYVTLSN 653
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 183/423 (43%), Gaps = 57/423 (13%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A L CA + K G IH+ + K D F+A LI++YA+ + A +VF +
Sbjct: 7 AKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTD 66
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+ ++ + G+ EAI L+ M S P+ +S VL A V + G+ +
Sbjct: 67 RNIVTWTTMVSAFTDGGRPYEAIRLYNDMPKSE-TPNGYMYSAVLKACGFVGDLGLGKLI 125
Query: 301 HSLIIKMGFSSFTFVANTVLDF-------------------------------YSKCELL 329
I + + T + N+++D YSK L+
Sbjct: 126 QERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLM 185
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL--YTYSNILN 387
E+ K F M +VVSWN++IAG A A+E + M C L +T+ L
Sbjct: 186 VEAEKLFHCMPHPNVVSWNSMIAG-FADNGSQRALEFVSMM--HKRCIKLDDFTFPCALK 242
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS------ 441
IS+ + GKQ H + K G++S+ SAL+DMY+ C L +A K+FD S
Sbjct: 243 ISALHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASI 302
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
S NL WN+ML GY + + AL + S + + + TF G L C+++ G
Sbjct: 303 SDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVG-- 360
Query: 502 YFNSMIRDHGI----SPRMDHIAS--VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
++ HG+ +D++ +V L+A A P + + W L+
Sbjct: 361 -----LQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLP-RKDIIAWSGLI 414
Query: 556 SGC 558
GC
Sbjct: 415 MGC 417
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 130/256 (50%), Gaps = 6/256 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++T G+ + + + L+ +Y K + I+DA +F +P +++I+WS LI G +QIG+ +A
Sbjct: 367 IVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLA 426
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F+ M+ V E +++ + C++ RSGK++H +SG E+ L++M
Sbjct: 427 FSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDM 486
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A +F E++ +SW ++ Q G+ ++ F +SG+ +E +
Sbjct: 487 YSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITF 546
Query: 181 ASVLGACAVLGNLKVGMQIHS---LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
VL AC G ++ I + V+ + + M ++L A + A ++ +N
Sbjct: 547 LGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCM--VDLLASVGLPEEAEKLIAN 604
Query: 238 IQL-PDLTAWSALIGG 252
+ P+ T W L+G
Sbjct: 605 MPFEPNQTTWRTLLGA 620
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/544 (34%), Positives = 297/544 (54%), Gaps = 13/544 (2%)
Query: 133 VFDASLERNSI-SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
+F +++ S+ SW S+++ + + G+ + L F RK + + + + +C+ L
Sbjct: 41 MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+L G QIH F D FVA LI++Y+KC L+ A ++F I ++ +W+++I
Sbjct: 101 DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMIS 160
Query: 252 GYAQLGKACEAIDLFVKMF-----------SSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
GY Q +A EA+ LF + G+ V V+ A A V +
Sbjct: 161 GYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECV 220
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L +K GF V NT++D Y+KC + S K FD M+E DV SWN+LIA + +
Sbjct: 221 HGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLS 280
Query: 361 GEAIELLKDMLFEGHCP-NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA L DM+ G N T S +L + A++ GK H +VK + N+V+G++
Sbjct: 281 VEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTS 340
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
+VDMY KCGR+ ARK FD L KN+ SW M+ GY HG G+EA++++ M IKPN
Sbjct: 341 IVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPN 400
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ VL+AC H GL++EGWH+FN M + + P ++H + +V L G + AY I
Sbjct: 401 YITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLI 460
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+ ++P+ +VW LL C+ HK++ LG +A K+ DP + +++LSN+YA+A WD
Sbjct: 461 QEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWD 520
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ ++R +MK L K G S E + ++H F Q ++E +++L+V L + G
Sbjct: 521 DVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVG 580
Query: 660 YVPD 663
Y+P+
Sbjct: 581 YMPN 584
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 217/435 (49%), Gaps = 22/435 (5%)
Query: 36 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG 95
+ + +V SW+++I+ F++ G AL F M L PN T+ + +C+S D +G
Sbjct: 46 VDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAG 105
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ- 154
K+IH + + G + V++ LI+MY KCG L+ A+ +FD ERN +SW S++S Y Q
Sbjct: 106 KQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQN 165
Query: 155 --CGEHVHGLKIFLLSRKSG---VAISEFSCASVLGACAVLGNLKVGMQ-----IHSLVF 204
E V K FLL ++ + SVL C + +V ++ +H L
Sbjct: 166 ERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAV 225
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
K E V L++ YAKC ++ ++ +VF ++ D+ +W++LI YAQ G + EA
Sbjct: 226 KKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFS 285
Query: 265 LFVKMFSSG-LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
LF M G + + VT S VL A A G+ +H ++KM V +++D Y
Sbjct: 286 LFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMY 345
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
KC +E + K FD + +V SW ++AG+ H EA+++ +M+ G PN T+
Sbjct: 346 CKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFV 405
Query: 384 NILNISSDIPAIE----WGKQTHCCI-VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
++L S ++ W + C V+PG + S +VD+ + G L +A +
Sbjct: 406 SVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHY----SCMVDLLGRAGYLKEAYGLIQ 461
Query: 439 HLSSK-NLVSWNTML 452
+ K + + W ++L
Sbjct: 462 EMKVKPDFIVWGSLL 476
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 194/388 (50%), Gaps = 42/388 (10%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G+ ++ + L+ MY K +NDA+KLFDE+PERNV+SW+++ISG+ Q A+ F
Sbjct: 116 GYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLF 175
Query: 65 RLMVCCVLEPNY-----------YTYVGAVSACASRGDARSGKE-IHGRMYRSGLELNSH 112
+ + V E +Y +G V + +R +S E +HG + G E
Sbjct: 176 KEFL-LVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLA 234
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKS 171
V N L++ Y KCG +S ++ VFD E + SW SL++ Y Q G V +F + ++
Sbjct: 235 VGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRG 294
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
V + + ++VL ACA G L++G IH V K LE + V ++++Y KC ++++A
Sbjct: 295 EVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMA 354
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+ F ++ ++ +W+ ++ GY G EA+ +F +M G+ P+ +TF VL A +
Sbjct: 355 RKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACS-- 412
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVA------------NTVLDFYSKCELLEESLKTFDEM 339
H+ ++K G+ F + + ++D + L+E+ EM
Sbjct: 413 ---------HAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEM 463
Query: 340 D-EHDVVSWNALIAGHLASCHYGEAIEL 366
+ D + W +L L +C + +EL
Sbjct: 464 KVKPDFIVWGSL----LGACRIHKNVEL 487
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 5/255 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GF + N L+ Y K I+ ++K+FD M E +V SW++LI+ ++Q G+ A
Sbjct: 225 VKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAF 284
Query: 62 NYFRLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F MV + N T + ACA G + GK IH ++ + LE N V +++M
Sbjct: 285 SLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDM 344
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A+ FD +N SW +++ Y G +K+F + G+ + +
Sbjct: 345 YCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITF 404
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA--MGLINLYAKCEKLDLASRVFSNI 238
SVL AC+ G LK G + + KC + + + +++L + L A + +
Sbjct: 405 VSVLAACSHAGLLKEGWHWFNKM-KCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEM 463
Query: 239 QL-PDLTAWSALIGG 252
++ PD W +L+G
Sbjct: 464 KVKPDFIVWGSLLGA 478
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/633 (29%), Positives = 327/633 (51%), Gaps = 5/633 (0%)
Query: 9 NVITY--NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
V+T+ N L + + A+++FD+MP R+++SW+A+I G+ + A+ F
Sbjct: 31 QVVTFDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSA 90
Query: 67 M--VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M V + P+ + AC + G+ +H ++ L + V + L++MY +
Sbjct: 91 MRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRV 150
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + + VF RN+++W ++++ G + GL F S F+ A L
Sbjct: 151 GKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIAL 210
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA L +K G QIH+ V + +VA L +Y +C ++ +F N+ D+
Sbjct: 211 KACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVV 270
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W++LI Y ++G +A++ F+KM +S + P+E TF+ + A A + + G QLH +
Sbjct: 271 SWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNV 330
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
+G + V+N+++ YS C L+ + F M D++SW+ +I G+ + EA
Sbjct: 331 FSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAF 390
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+ M G P + +++L++S ++ +E G+Q H G + N + S L++MY
Sbjct: 391 KYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMY 450
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+KCG + +A K+F+ ++VS M+ GYA+HG +EA++++ + P+ TFI
Sbjct: 451 SKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFI 510
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
VL+AC H G ++ G+HYFN M + + P +H +V L G+ A + I
Sbjct: 511 SVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSW 570
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+ + VVW LL CK D+ GR AAE+IL DP +A + L+N+Y+ +E A V
Sbjct: 571 KKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANV 630
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYF-STSRF 636
RK MK K + K+ G S ++++ + F S RF
Sbjct: 631 RKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRF 663
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 178/364 (48%), Gaps = 24/364 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF V N L MY + + D LF+ M ER+V+SW++LI +++IG E A
Sbjct: 229 VIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKA 288
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M + PN T+ SACAS G+++H ++ GL + VSN ++ M
Sbjct: 289 VETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKM 348
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y CG L SA +F R+ ISW +++ Y Q G K F R+SG ++F+
Sbjct: 349 YSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFAL 408
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L + L+ G Q+H+L F LE + V LIN+Y+KC + AS++F
Sbjct: 409 ASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDR 468
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ + +A+I GYA+ GK+ EAIDLF K G P VTF VL A
Sbjct: 469 DDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACT----------- 517
Query: 301 HSLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSW 347
HS + +GF F + ++D + L E+ K DEM + D V W
Sbjct: 518 HSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVW 577
Query: 348 NALI 351
L+
Sbjct: 578 TTLL 581
>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 192/624 (30%), Positives = 320/624 (51%), Gaps = 10/624 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF---- 64
+V + L+ MY + + DA KLFDEM ER+V++W+A++SG + G + Y
Sbjct: 150 SVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMI 209
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
RL PN T + AC G+ +G+ +HG + G+ + V + L +MY KC
Sbjct: 210 RLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKC 269
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ A +F E++ +SW L+ +YC+ G +++F +SG+ E + VL
Sbjct: 270 DMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVL 329
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
N+ G H+++ + +A LI++Y K E +D+A VF + D
Sbjct: 330 SGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDE 389
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSG---LMPSEVTFSYVLGAFADVKETIGGRQLH 301
+WS ++ GY + G + ++L+ +M + + + + + + G+ +H
Sbjct: 390 SWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVH 449
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHY 360
IK + + N+++ Y +C E + K F DVV+WNALI+ +
Sbjct: 450 CYSIKCLLDENS-ITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRS 508
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A+ L ML E PN T +++ +++ A+E G+ H + G +S+V I +AL
Sbjct: 509 NDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTAL 568
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMY KCG+L AR +FD + +++V+WN M+ GY HG +AL+++S M+ IKPN
Sbjct: 569 VDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNS 628
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ +LSAC H GLV+EG F M + + P + H A +V L G + A + +
Sbjct: 629 LTFLAILSACCHAGLVDEGRKLFIRM-GGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVL 687
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+ PI+P+ VW LLS CK H + +G A+K S+DP + +I++SN Y A WDE
Sbjct: 688 AMPIKPDGGVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGYYILMSNSYGSAEKWDE 747
Query: 601 TAKVRKIMKEKSLKKDTGCSWTEL 624
K+R MK ++K G S ++
Sbjct: 748 IEKLRDTMKNYGVEKGVGWSAVDV 771
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 224/464 (48%), Gaps = 10/464 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G + + L MY K DA LF E+ E++V+SW+ LI + + G+ A+
Sbjct: 248 VKEGIRDCALVVSALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAV 307
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F+ M L+P+ +S S + GK H + R + ++N LI+MY
Sbjct: 308 ELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMY 367
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC- 180
GK L+ A VF +R+ SW +++ YC+ G V L+++ + EF C
Sbjct: 368 GKFELVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELY--RQMQCRDHDEFLCD 425
Query: 181 ----ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
S + +C+ LG L++G +H KC L+ + + LI +Y +C +LA ++F+
Sbjct: 426 ITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLD-ENSITNSLIGMYGRCGNFELACKIFA 484
Query: 237 NIQL-PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+L D+ W+ALI Y+ +G++ +A+ L+ +M + + P+ T V+ A A++
Sbjct: 485 VAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALE 544
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G LHS + MG S ++ ++D Y+KC L + FD M + DVV+WN +I+G+
Sbjct: 545 HGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYG 604
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+A++L +M PN T+ IL+ ++ G++ + + N+
Sbjct: 605 MHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKLFIRMGGYRLEPNLK 664
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH 458
+ +VD+ K G L +A + + K + W T+L H
Sbjct: 665 HYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGVWGTLLSACKVH 708
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 173/341 (50%), Gaps = 15/341 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I F +V+ N L+ MY KF ++ A +F + +R+ SWS +++G+ + G+
Sbjct: 348 IIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKC 407
Query: 61 LNYFRLMVCCVLEP---NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
L +R M C + + + V A+S+C+ G R G+ +H + L+ NS ++N L
Sbjct: 408 LELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLDENS-ITNSL 466
Query: 118 INMYGKCGLLSSAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
I MYG+CG A +F A L R+ ++W +L+SSY G L ++ V +
Sbjct: 467 IGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPN 526
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+ +V+ ACA L L+ G +HS V LE D ++ L+++Y KC +L A +F
Sbjct: 527 SSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFD 586
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
++ D+ W+ +I GY G+A +A+ LF +M + + P+ +TF +L A
Sbjct: 587 SMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDE 646
Query: 297 GRQLHSLIIKMGFSSFTFVAN-----TVLDFYSKCELLEES 332
GR+ L I+MG + N ++D K LL+E+
Sbjct: 647 GRK---LFIRMG--GYRLEPNLKHYACMVDLLGKSGLLQEA 682
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 149/306 (48%), Gaps = 12/306 (3%)
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
+++H+L L A L++ Y+ A+ FS PD W++L+ +
Sbjct: 32 LRLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCA 91
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF---SSFT 313
A+ +M +SG PS T A A++ G +HS +K G
Sbjct: 92 SDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSV 151
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF- 372
V+++++ Y++C L +++K FDEM E DVV+W A+++G + + G+ I L M+
Sbjct: 152 AVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRL 211
Query: 373 ---EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
G PN T + L + + G+ H VK G ++ SAL MY+KC
Sbjct: 212 AGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDM 271
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
DA +F L+ K++VSW ++ Y + GL REA+E++ M+++ ++P++ VL +
Sbjct: 272 TEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDE-----VLVS 326
Query: 490 CVHIGL 495
CV GL
Sbjct: 327 CVLSGL 332
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 134/310 (43%), Gaps = 40/310 (12%)
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+LH+L G SS A ++ YS L + F D WN+L+ H +
Sbjct: 33 RLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCAS 92
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF---DSNVV 415
+ A+ + M G P+ +T + ++++ A+ G H VK G D +V
Sbjct: 93 DFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSVA 152
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG-LGREALEIYSMMQ-- 472
+ S+LV MYA+CG L DA K+FD + +++V+W ++ G ++G G+ + M++
Sbjct: 153 VSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLA 212
Query: 473 -ENKIKPNDNTFIGVLSACVHIGLVEEG----WHYFNSMIRDHGIS--------PRMDHI 519
++ +PN T L AC +G + G + IRD + + D
Sbjct: 213 GDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMT 272
Query: 520 ASVVHLFA-----------------C-RGQTRRAYEF---IKSSPIEPNKVVWRCLLSGC 558
LF C RG R A E ++ S ++P++V+ C+LSG
Sbjct: 273 EDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGL 332
Query: 559 KTHKDLVLGR 568
+ ++ G+
Sbjct: 333 GSSANVNRGK 342
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 192/622 (30%), Positives = 323/622 (51%), Gaps = 4/622 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G ++ L+ +Y F DA+ +FD++PE + W ++ + +
Sbjct: 70 NGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKL 129
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+ L++ + + A+ AC D +GK+IH ++ + ++ V L++MY K
Sbjct: 130 YDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAK 188
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + SA VF+ RN + W S+++ Y + GL +F R++ V +E++ ++
Sbjct: 189 CGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTL 248
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
+ AC L L G H + K +E + L+++Y KC + A RVF+ DL
Sbjct: 249 IMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDL 308
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W+A+I GY G EA+ LF KM + P+ VT + VL ++ GR +H L
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL 368
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
IK+G T VAN ++ Y+KC ++ F+ E D+V+WN++I+G + EA
Sbjct: 369 SIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEA 427
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF--DSNVVIGSALV 421
+ L M E PN T +++ + + + ++ G H VK GF S+V +G+AL+
Sbjct: 428 LFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALL 487
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
D YAKCG AR +FD + KN ++W+ M+ GY + G +LE++ M + + KPN++
Sbjct: 488 DFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNES 547
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF +LSAC H G+V EG YF+SM +D+ +P H +V + A G+ +A + I+
Sbjct: 548 TFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEK 607
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
PI+P+ + L GC H LG +K+L P+D S ++++SN+YA W++
Sbjct: 608 MPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQA 667
Query: 602 AKVRKIMKEKSLKKDTGCSWTE 623
+VR +MK++ L K G S E
Sbjct: 668 KEVRNLMKQRGLSKIAGHSTME 689
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 236/471 (50%), Gaps = 4/471 (0%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
++ HG + +GL + ++ L+++YG G A+ VFD E + W +L YC
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
E V +K++ L K G + + L AC L +L G +IH + K FD V
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVL 179
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
GL+++YAKC ++ A +VF++I L ++ W+++I GY + E + LF +M + ++
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
+E T+ ++ A + G+ H ++K G + + ++LD Y KC + + +
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F+E D+V W A+I G+ + EA+ L + M PN T +++L+ I +
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENL 359
Query: 396 EWGKQTHCCIVKPG-FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
E G+ H +K G +D+NV +ALV MYAKC + DA+ VF+ S K++V+WN+++ G
Sbjct: 360 ELGRSVHGLSIKVGIWDTNV--ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISG 417
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
++Q+G EAL ++ M + PN T + SAC +G + G ++ ++
Sbjct: 418 FSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLAS 477
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
H+ + + F + ++ I + E N + W ++ G D +
Sbjct: 478 SSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTI 528
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 181/357 (50%), Gaps = 5/357 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG + LL MYVK I++A+++F+E +++ W+A+I G++ G A
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 327
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F+ M ++PN T +S C + G+ +HG + G+ +++V+N L++M
Sbjct: 328 LSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHM 386
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC A++VF+ E++ ++W S++S + Q G L +F V + +
Sbjct: 387 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTV 446
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLASRVFSNI 238
AS+ ACA LG+L VG +H+ K V +G L++ YAKC A +F I
Sbjct: 447 ASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTI 506
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ + WSA+IGGY + G +++LF +M P+E TF+ +L A G+
Sbjct: 507 EEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGK 566
Query: 299 QLHSLIIK-MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
+ S + K F+ T ++D ++ LE++L ++M + DV + A + G
Sbjct: 567 KYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 623
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 185/532 (34%), Positives = 287/532 (53%), Gaps = 9/532 (1%)
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
N SW S+++ + G+ V L+ F RK G+ + S + +C+ L +L G H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
F E D FV+ LI++Y+KC +L A +F I L ++ +W+++I GY Q +A
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225
Query: 261 EAIDLFVKMFS--------SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
A+ LF + + V VL A + V +H ++K GF
Sbjct: 1226 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 1285
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V NT++D Y+KC S K FD M+E D +SWN++IA + S GEA+E+ M+
Sbjct: 1286 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVR 1345
Query: 373 E-GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
G N T S +L + A+ GK H ++K + NV +G++++DMY KCGR+
Sbjct: 1346 HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVE 1405
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
A+K FD + KN+ SW M+ GY HG +EAL+I+ M +KPN TF+ VL+AC
Sbjct: 1406 MAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS 1465
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
H GLVEEGWH+FN+M + I P ++H +V LF G AY IK ++P+ VVW
Sbjct: 1466 HAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVW 1525
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
LL C+ HK++ LG AA+K+ DP++ +++LSN+YA+A W + ++R +MK +
Sbjct: 1526 GSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNR 1585
Query: 612 SLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
L K G S EL+ ++H F +++ + +L++ L GYVP+
Sbjct: 1586 QLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPN 1637
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 196/380 (51%), Gaps = 31/380 (8%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
N K QIH+ + + L D+ + LI+LY+ ++ A +F IQ P W+ +I
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G + +A+ L+ M G+ + TF +V+ A + G+ +H +IK GFS
Sbjct: 99 ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSG 158
Query: 312 FTFVANTVLDFYSKCEL-------------------------------LEESLKTFDEMD 340
FV N ++DFY KC L+E+ + FDE+
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
+VVSW A+I G++ + EA+EL K M E PN YT +++ +++ + G+
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
H +K + V +G+AL+DMY+KCG + DA +VF+ + K+L +WN+M+ HGL
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
G+EAL ++S M+ +KP+ TFIGVL ACVHI V+EG YF M + +GI+P +H
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYE 398
Query: 521 SVVHLFACRGQTRRAYEFIK 540
+ L+A A++ K
Sbjct: 399 CMTELYARSNNLDEAFKSTK 418
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 215/441 (48%), Gaps = 19/441 (4%)
Query: 27 NDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSAC 86
N A + + + NV SW+++I+ ++ G AL F + L P ++ + +C
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV 146
++ D SG+ H + + G E + VS+ LI+MY KCG L A+ +FD RN +SW
Sbjct: 1153 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 1212
Query: 147 SLLSSYCQCGEHVHGLKIFL--------LSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
S+++ Y Q + + L +F + + V + SVL AC+ + +
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 1272
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H V K + V L++ YAKC + ++ +VF ++ D +W+++I YAQ G
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 1332
Query: 259 ACEAIDLFVKMFSS-GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
+ EA+++F M G+ + VT S VL A A G+ +H +IKM V
Sbjct: 1333 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 1392
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
+++D Y KC +E + KTFD M E +V SW A++AG+ EA+++ M+ G P
Sbjct: 1393 SIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP 1452
Query: 378 NLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
N T+ ++L S +E G H ++PG + +VD++ + G LN+
Sbjct: 1453 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHY----GCMVDLFGRAGCLNE 1508
Query: 433 ARKVFDHLSSK-NLVSWNTML 452
A + + K + V W ++L
Sbjct: 1509 AYNLIKRMKMKPDFVVWGSLL 1529
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 203/405 (50%), Gaps = 26/405 (6%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF ++ + L+ MY K ++ DA+ LFDE+P RNV+SW+++I+G+ Q + AL F
Sbjct: 1172 GFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLF 1231
Query: 65 RLMVCCVLE-------P-NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
+ + E P + V +SAC+ + +HG + + G + + V N
Sbjct: 1232 KDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNT 1291
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAI 175
L++ Y KCG ++ VFD E++ ISW S+++ Y Q G L++F + R GV
Sbjct: 1292 LMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRY 1351
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ + ++VL ACA G L+ G IH V K LE++ V +I++Y KC ++++A + F
Sbjct: 1352 NAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTF 1411
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
++ ++ +W+A++ GY G+A EA+D+F KM +G+ P+ +TF VL A +
Sbjct: 1412 DRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVE 1471
Query: 296 GG-----RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNA 349
G H I+ G + ++D + + L E+ M + D V W +
Sbjct: 1472 EGWHWFNAMKHKYDIEPGIEHY----GCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGS 1527
Query: 350 LIAGHLASCHYGEAI---ELLKDMLFEGHCPNLYTYSNILNISSD 391
L L +C + + E+ LFE N Y + N+ +D
Sbjct: 1528 L----LGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYAD 1568
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 153/280 (54%), Gaps = 9/280 (3%)
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
+LA+ + + ++ +W+++I A+ G + EA+ F + GL+P+ +F + +
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ + + + GR H GF + FV++ ++D YSKC L+++ FDE+ +VVSW
Sbjct: 1153 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 1212
Query: 349 ALIAGHLASCHYGEAIELLKDMLFE-------GHCP-NLYTYSNILNISSDIPAIEWGKQ 400
++I G++ + A+ L KD L E + P + ++L+ S + +
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 1272
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
H +VK GFD ++ +G+ L+D YAKCG+ ++KVFD + K+ +SWN+M+ YAQ GL
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 1332
Query: 461 GREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
EALE++ M++ ++ N T VL AC H G + G
Sbjct: 1333 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAG 1372
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 160/371 (43%), Gaps = 32/371 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + + L+ +Y RI A LF ++ +W+ +I + G+ E A
Sbjct: 50 IIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQA 109
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L ++ MVC + + +T+ + AC + GK +HG + + G + V N LI+
Sbjct: 110 LMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDF 169
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--------------- 165
Y KCG A VF+ RN +SW +++S CG+ +IF
Sbjct: 170 YFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMI 229
Query: 166 --------------LLSRKSGVAI--SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
L R I +E++ S++ AC +G L +G IH K +E
Sbjct: 230 NGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIE 289
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
++ LI++Y+KC + A VF + L W+++I G EA++LF +M
Sbjct: 290 IGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEM 349
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK-MGFSSFTFVANTVLDFYSKCEL 328
+ P +TF VL A +K G + + + G + + + Y++
Sbjct: 350 ERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNN 409
Query: 329 LEESLKTFDEM 339
L+E+ K+ E+
Sbjct: 410 LDEAFKSTKEV 420
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 131/255 (51%), Gaps = 3/255 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF ++ N L+ Y K + ++K+FD M E++ ISW+++I+ ++Q G+ A
Sbjct: 1277 VVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEA 1336
Query: 61 LNYFRLMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L F MV V + N T + ACA G R+GK IH ++ + LE N V +I+
Sbjct: 1337 LEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIID 1396
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG + A+ FD E+N SW ++++ Y G L IF ++GV + +
Sbjct: 1397 MYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYIT 1456
Query: 180 CASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
SVL AC+ G ++ G +++ K +E +++L+ + L+ A + +
Sbjct: 1457 FVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRM 1516
Query: 239 QL-PDLTAWSALIGG 252
++ PD W +L+G
Sbjct: 1517 KMKPDFVVWGSLLGA 1531
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 144/322 (44%), Gaps = 31/322 (9%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
++IH ++ RSGL + ++ LI++Y G ++ A +F + +W ++ +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G L ++ G+A +F+ V+ AC ++ +G +H + K D FV
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 216 MGLINLYAKC----------EKLDL---------------------ASRVFSNIQLPDLT 244
LI+ Y KC EK+ + A R+F I ++
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+A+I GY + + EA++LF +M + + P+E T ++ A ++ GR +H
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK ++ ++D YSKC ++++++ F+ M + +WN++I EA+
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343
Query: 365 ELLKDMLFEGHCPNLYTYSNIL 386
L +M P+ T+ +L
Sbjct: 344 NLFSEMERVNVKPDAITFIGVL 365
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 151/332 (45%), Gaps = 48/332 (14%)
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
+ +D+ +V SWN++IA EA+ + G P ++ + S + +
Sbjct: 1099 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 1158
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
G+ +H GF++++ + SAL+DMY+KCG+L DAR +FD + +N+VSW +M+ GY
Sbjct: 1159 VSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGY 1218
Query: 456 AQHGLGREALEIYS--MMQENKIKPNDN------TFIGVLSACVHIG--LVEEGWHYF-- 503
Q+ AL ++ + +E +++ +N + VLSAC + + EG H F
Sbjct: 1219 VQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVV 1278
Query: 504 -----------NSMIRDHG------ISPRM-------DHIA--SVVHLFACRGQTRRAYE 537
N+++ + +S ++ D I+ S++ ++A G + A E
Sbjct: 1279 KKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALE 1338
Query: 538 ----FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE-DTSAHIMLSNVY 592
++ + N V +L C L G+ ++++ D E + + ++Y
Sbjct: 1339 VFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMY 1398
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
+ + K MKEK++K SWT +
Sbjct: 1399 CKCGRVEMAKKTFDRMKEKNVK-----SWTAM 1425
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 269/445 (60%)
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
+ L + C + A ++FS IQ P++ W+ +I GYA+ A++L+ +M S + P
Sbjct: 80 IFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPD 139
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
T+ ++L A A + + G ++HS+ I+ GF S FV NT++ Y+ C E + K F+
Sbjct: 140 THTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFE 199
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
M E ++V+WN++I G+ + EA+ L ++M G P+ +T ++L+ +++ A+
Sbjct: 200 LMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALAL 259
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
G++ H +VK G D N+ G+AL+D+YAKCG + A KVFD + K++VSW +++VG A
Sbjct: 260 GRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAV 319
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
+G G+EALE++ ++ + P++ TF+GVL AC H G+V+EG+ YF M ++GI P+++
Sbjct: 320 NGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIE 379
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILST 577
H +V L G ++A+EFI++ P++PN VVWR LL C H L LG A ++L
Sbjct: 380 HYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQL 439
Query: 578 DPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFA 637
+P+ + +++LSN+YA W + KVR+ M + +KK G S EL+N++H F +
Sbjct: 440 EPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRS 499
Query: 638 QFQGIDLHEVMNQLSVHLFDGGYVP 662
Q +++ + +++ L GYVP
Sbjct: 500 HPQTEEIYVKLAEITKLLKLEGYVP 524
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 172/351 (49%), Gaps = 29/351 (8%)
Query: 24 SRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAV 83
S ++ A ++F ++ N+ +W+ +I G+++ P AL +R M +EP+ +TY +
Sbjct: 88 SPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLL 147
Query: 84 SACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSI 143
A A D R G+++H R+G E V N L++MY CG SA +F+ ERN +
Sbjct: 148 KAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLV 207
Query: 144 SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV 203
+W S+++ Y G L +F GV F+ S+L ACA LG L +G + H +
Sbjct: 208 TWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYM 267
Query: 204 FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
K L+ + L++LYAKC + A +VF ++ + +W++LI G A G EA+
Sbjct: 268 VKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEAL 327
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT----- 318
+LF ++ GLMPSE+TF VL A + H ++ GF F +
Sbjct: 328 ELFKELERKGLMPSEITFVGVLYACS-----------HCGMVDEGFDYFKRMKEEYGIVP 376
Query: 319 -------VLDFYSKCELLEESLKTFDEMD-EHDVVSWNAL-----IAGHLA 356
++D + L++++ + M + + V W L I GHLA
Sbjct: 377 KIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLA 427
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 176/379 (46%), Gaps = 26/379 (6%)
Query: 96 KEIHGRMYRSGLEL-NSHVSNCLI-NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
++IH R G+ L N + LI + C +S A +F N +W +++ Y
Sbjct: 57 RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
+ + L+++ S + + +L A A L +++ G ++HS+ + E F
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
V L+++YA C + A ++F + +L W+++I GYA G+ EA+ LF +M G
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRG 236
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ P T +L A A++ GR+ H ++K+G N +LD Y+KC + ++
Sbjct: 237 VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAH 296
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
K FDEM+E VVSW +LI G + EA+EL K++ +G P+ T+ +L S
Sbjct: 297 KVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACS--- 353
Query: 394 AIEWGKQTHCCIVKPGFD------------SNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
HC +V GFD + +VD+ + G + A + ++
Sbjct: 354 --------HCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMP 405
Query: 442 SK-NLVSWNTMLVGYAQHG 459
+ N V W T+L HG
Sbjct: 406 MQPNAVVWRTLLGACTIHG 424
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 134/279 (48%), Gaps = 7/279 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +GF V N L+ MY A KLF+ M ERN+++W+++I+G++ G P AL
Sbjct: 167 IRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEAL 226
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
FR M +EP+ +T V +SACA G G+ H M + GL+ N H N L+++Y
Sbjct: 227 TLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLY 286
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A VFD E++ +SW SL+ G L++F + G+ SE +
Sbjct: 287 AKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFV 346
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG-LINLYAKCEKLDLASRVFSNIQL 240
VL AC+ G + G + + K G +++L + + A N+ +
Sbjct: 347 GVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPM 406
Query: 241 -PDLTAWSALIG-----GYAQLGKACEAIDLFVKMFSSG 273
P+ W L+G G+ LG+ A L ++ SG
Sbjct: 407 QPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSG 445
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ G N+ N LL +Y K I A K+FDEM E++V+SW++LI G + G + A
Sbjct: 267 MVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEA 326
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F+ + L P+ T+VG + AC+ G G + RM G+ C+++
Sbjct: 327 LELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVD 386
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVH 160
+ G+ GL+ A +F+ + ++ N++ W +LL + C H H
Sbjct: 387 LLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGA---CTIHGH 425
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 200/634 (31%), Positives = 326/634 (51%), Gaps = 3/634 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + + L+ Y KF I+ +K+FD M +RNV+ W+ +I +S+ G ++A
Sbjct: 75 VVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIA 134
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F+ M ++P T V +S +H + G E + +SN ++NM
Sbjct: 135 FSMFKQMRESGIQP---TSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNM 191
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG ++ A+ +F + R+ +SW SLLS+Y + G L++ + + + +
Sbjct: 192 YGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S L A A+ G+L++G +H L+ K L D+ V L+ LY +C LD A +VF +
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ W+A+I G Q A +A+ +F +M S + PS T + L A A + G +
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +++ G N+++ Y+KC L++S F++M E D+VSWNA++AGH + +
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ I +M P+ T +++L A+ GK H +++ ++ +AL
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 491
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMY KCG L +A+K FD + ++LV+W+T++VGY +G G AL YS ++PN
Sbjct: 492 VDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNH 551
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
FI VLSAC H GL+ +G + SM +D +SP ++H A VV L + G+ AY F K
Sbjct: 552 VIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYK 611
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
EP+ VV LL C+ + + LG+ A + P D + L+N YA + WD
Sbjct: 612 MMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYASMSRWDG 671
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTS 634
K M+ LKK G S E+ F S
Sbjct: 672 VEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFAS 705
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 252/515 (48%), Gaps = 5/515 (0%)
Query: 43 SWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM 102
S+++L+S S G L + M + + YT+ AC + G +H +
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 103 YRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGL 162
+GL +S++ + LI+ Y K G + + VFD L+RN + W +++ SY + G+
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 163 KIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
+F R+SG+ + + S+L + L + + +H L+ E D ++ ++N+Y
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMY 192
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
KC ++ A R+F +I D+ +W++L+ Y+++G E + L M + P + TF
Sbjct: 193 GKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
L A A + G+ +H L++K G + V + ++ Y +C L+ + K F E
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEK 312
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
DVV W A+I+G + + +A+ + M+ P+ T ++ L + + + G H
Sbjct: 313 DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIH 372
Query: 403 CCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
+++ G ++ ++LV MYAKC +L + +F+ + K+LVSWN ++ G+A++G
Sbjct: 373 GYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLS 432
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV 522
+ + ++ M+++ ++P+ T +L AC G + +G N ++R I M A V
Sbjct: 433 KGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALV 492
Query: 523 VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
F C G A + ++ + V W L+ G
Sbjct: 493 DMYFKC-GNLENAQKCFDCM-LQRDLVAWSTLIVG 525
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 273/483 (56%), Gaps = 3/483 (0%)
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
+CA L L HSLVFK AL D LI +Y++C ++ A +VF I DL +
Sbjct: 125 SCANLAVLSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVS 184
Query: 246 WSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+++I GYA+ G A EA+++F +M G P E++ VLGA ++ + GR + +
Sbjct: 185 WNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 244
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
++ G + +++ + ++ Y+KC L + + FD M DV++WNA+I+G+ + EAI
Sbjct: 245 VERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAI 304
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
L M + N T + +L+ + I A++ GKQ + GF ++ + +AL+DMY
Sbjct: 305 SLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMY 364
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK--IKPNDNT 482
AKCG L A++VF + KN SWN M+ A HG +EAL ++ M + +PND T
Sbjct: 365 AKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDIT 424
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F+G+LSACVH GLV EG+ F+ M G+ P+++H + +V L A G A++ I+
Sbjct: 425 FVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKM 484
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
P +P+KV LL C++ K++ +G IL DP ++ +I+ S +YA NMW+++A
Sbjct: 485 PEKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSA 544
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
++R +M++K + K GCSW E++N +H F IDL +++ L L GYVP
Sbjct: 545 RMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKREGYVP 604
Query: 663 DPI 665
+
Sbjct: 605 KVV 607
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 218/450 (48%), Gaps = 11/450 (2%)
Query: 1 MITSGFH-PNVITYNHLLLMYVKFSRINDAQKLFDEM-PERNVISWSALISGFSQIGMP- 57
++ S H PN NHLL + A LF + P N +++ +I +
Sbjct: 42 VVKSSIHSPN----NHLLSKAIHLKNFTYASLLFSHIAPHPNDYAFNIMIRALTTTWHHY 97
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
+AL F M+ L PN +T+ +CA+ + H +++ L + H ++ L
Sbjct: 98 PLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLVFKLALHSDPHTTHSL 157
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAIS 176
I MY +CG ++ A+ VFD R+ +SW S+++ Y + G +++F + R+ G
Sbjct: 158 ITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPD 217
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
E S SVLGAC LG+L++G + V + + + ++ LI++YAKC L A R+F
Sbjct: 218 EMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFD 277
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ D+ W+A+I GYAQ G A EAI LF M + +++T + VL A A +
Sbjct: 278 GMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDL 337
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+Q+ + GF FVA ++D Y+KC L + + F EM + + SWNA+I+ +
Sbjct: 338 GKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALAS 397
Query: 357 SCHYGEAIELLKDMLFEGHC--PNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSN 413
EA+ L + M EG PN T+ +L+ + G + + G
Sbjct: 398 HGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPK 457
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+ S +VD+ A+ G L +A + + + K
Sbjct: 458 IEHYSCMVDLLARAGHLYEAWDLIEKMPEK 487
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 185/354 (52%), Gaps = 5/354 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
H + T + L+ MY + R+ A+K+FDE+P R+++SW+++I+G+++ G A+ F
Sbjct: 146 ALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVF 205
Query: 65 RLM-VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
M EP+ + V + AC GD G+ + G + G+ LNS++ + LI+MY K
Sbjct: 206 GEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAK 265
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG L SA+ +FD R+ I+W +++S Y Q G + +F ++ V ++ + +V
Sbjct: 266 CGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAV 325
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L ACA +G L +G QI + + D FVA LI++YAKC L A RVF + +
Sbjct: 326 LSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNE 385
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFS--SGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+W+A+I A GKA EA+ LF M G P+++TF +L A G +L
Sbjct: 386 ASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLF 445
Query: 302 SLIIKM-GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAG 353
++ + G + ++D ++ L E+ ++M E D V+ AL+
Sbjct: 446 DMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGA 499
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 179/399 (44%), Gaps = 56/399 (14%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G N + L+ MY K + A+++FD M R+VI+W+A+ISG++Q GM + A
Sbjct: 244 VVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEA 303
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F M + N T +SACA+ G GK+I + G + + V+ LI+M
Sbjct: 304 ISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDM 363
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEF 178
Y KCG L+SAQ VF ++N SW +++S+ G+ L +F + G ++
Sbjct: 364 YAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDI 423
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +L AC G + G ++ D+ S +F +
Sbjct: 424 TFVGLLSACVHAGLVNEGYRL----------------------------FDMMSTLFGLV 455
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
P + +S ++ A+ G EA DL KM P +VT +LGA K G
Sbjct: 456 --PKIEHYSCMVDLLARAGHLYEAWDLIEKMPEK---PDKVTLGALLGACRSKKNVDIGE 510
Query: 299 QLHSLIIKMGFS-SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV-----SWNALIA 352
++ +I+++ S S ++ ++ Y+ + E+S + M + + SW +
Sbjct: 511 RVIRMILEVDPSNSGNYIISS--KIYANLNMWEDSARMRLLMRQKGITKTPGCSWIE-VE 567
Query: 353 GHLASCHYGEAIEL-------LKDMLF-----EGHCPNL 379
HL H G+ + L + D+L+ EG+ P +
Sbjct: 568 NHLHEFHAGDGLCLDSIDLSNIIDLLYEELKREGYVPKV 606
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/582 (33%), Positives = 292/582 (50%), Gaps = 19/582 (3%)
Query: 93 RSGKEIHGRMYRSGLELNS----HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
R G+ +H R+ ++ L+S ++N LINMY K SA+ V + RN +SW SL
Sbjct: 23 RLGRVVHARIVKT---LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSL 79
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
+S Q G L F R+ GV ++F+ A A L G QIH+L KC
Sbjct: 80 ISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGR 139
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
D FV ++Y K D A ++F I +L W+A I G+ EAI+ F++
Sbjct: 140 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE 199
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
P+ +TF L A +D G QLH L+++ GF + V N ++DFY KC+
Sbjct: 200 FRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQ 259
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL-----KDMLFEGHCPNLYTYS 383
+ S F EM + VSW +L+A ++ + H E +L KD++ + S
Sbjct: 260 IRSSEIIFTEMGTKNAVSWCSLVAAYVQN-HEDEKASVLYLRSRKDIVETSD----FMIS 314
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
++L+ + + +E G+ H VK + + +GSALVDMY KCG + D+ + FD + K
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN--TFIGVLSACVHIGLVEEGWH 501
NLV+ N+++ GYA G AL ++ M P N TF+ +LSAC G VE G
Sbjct: 375 NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMK 434
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
F+SM +GI P +H + +V + G RAYEFIK PI+P VW L + C+ H
Sbjct: 435 IFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH 494
Query: 562 KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSW 621
LG AAE + DP+D+ H++LSN +A A W E VR+ +K +KK G SW
Sbjct: 495 GKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSW 554
Query: 622 TELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++N++H F + ++ + +L + GY PD
Sbjct: 555 ITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPD 596
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 228/482 (47%), Gaps = 14/482 (2%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P N+L+ MY K A+ + P RNV+SW++LISG +Q G AL F M
Sbjct: 40 PPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEM 99
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
+ PN +T+ A A AS +GK+IH + G L+ V +MY K L
Sbjct: 100 RREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 159
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A+ +FD ERN +W + +S+ G ++ F+ R+ + + + L AC
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ +L +GMQ+H LV + + D V GLI+ Y KC+++ + +F+ + + +W
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+L+ Y Q + +A L+++ + S+ S VL A A + GR +H+ +K
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
FV + ++D Y KC +E+S + FDEM E ++V+ N+LI G+ A+ L
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399
Query: 368 KDMLFE--GHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGSAL 420
++M G PN T+ ++L+ S A+E G + + ++PG + S +
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHY----SCI 455
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
VDM + G + A + + + +S W + H G+ L + + K+ P
Sbjct: 456 VDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH--GKPQLGLLAAENLFKLDPK 513
Query: 480 DN 481
D+
Sbjct: 514 DS 515
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 125/266 (46%), Gaps = 9/266 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF +V N L+ Y K +I ++ +F EM +N +SW +L++ + Q E A
Sbjct: 235 VLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA 294
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ ++E + + +SACA G+ IH ++ +E V + L++M
Sbjct: 295 SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 354
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEF 178
YGKCG + ++ FD E+N ++ SL+ Y G+ L +F + R G +
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 179 SCASVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ S+L AC+ G ++ GM+I S+ +E ++++ + ++ A
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKK 474
Query: 238 IQL-PDLTAWSAL-----IGGYAQLG 257
+ + P ++ W AL + G QLG
Sbjct: 475 MPIQPTISVWGALQNACRMHGKPQLG 500
>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
Length = 591
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/570 (32%), Positives = 295/570 (51%), Gaps = 16/570 (2%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS-----------NCLINMYGK 123
NY + G +++C GD R G +H + ++ S N L++MY +
Sbjct: 10 NYARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYAR 69
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG A VFD R+++SW SL+++ G+ + + L R A + +V
Sbjct: 70 CGRREDAARVFDEMRVRDAVSWNSLIAASRGAGDALALFRRML--RSDARACDRATFTTV 127
Query: 184 LGACAVLG--NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
L CA G +L +H LV C E + V L+ Y +C A RVF +
Sbjct: 128 LSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEK 187
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+A+I G A+ E+ LF +M + + + T+S L A A G+Q+H
Sbjct: 188 NVITWTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCALLACARSLAAREGQQVH 246
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
L++K GF V + ++D YSKC L+E++L F E D V ++ G +
Sbjct: 247 GLVVKAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEE 306
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A EL +M+ G+ + T S +L GKQ H ++K F N + + LV
Sbjct: 307 KAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLV 366
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
+MY+KCG L ++ +VFD + SKN VSWN+++ +A+HG G E +++ M+ + KP D
Sbjct: 367 NMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDV 426
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ +L AC H+G ++G NSM +G+ PRM+H A VV + G A FI+
Sbjct: 427 TFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIED 486
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P N ++W+ L+ C H + +G+YAAEK+L DP T+A+++LSN+Y+ WD+
Sbjct: 487 GPFTDNALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTAAYVLLSNIYSSEGRWDDR 546
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
AKV K M E L+KDTG SW EL+ ++H F
Sbjct: 547 AKVMKRMSEMGLRKDTGKSWIELEKEVHSF 576
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/456 (31%), Positives = 232/456 (50%), Gaps = 11/456 (2%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVC 69
++ +N L+ MY + R DA ++FDEM R+ +SW++LI+ G AL FR M+
Sbjct: 57 LVAWNSLVSMYARCGRREDAARVFDEMRVRDAVSWNSLIAASRGAG---DALALFRRMLR 113
Query: 70 CVLEP-NYYTYVGAVSACASRGDAR--SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
+ T+ +S CA G A + +HG + G E V N L+ Y +CG
Sbjct: 114 SDARACDRATFTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGS 173
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLG 185
+SA+ VF E+N I+W +++S + + +F + R + +SCA L
Sbjct: 174 PASAERVFHGMAEKNVITWTAMISGMARAELYKESFSLFGQMIRTVDANNATYSCA--LL 231
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
ACA + G Q+H LV K E D V GL+++Y+KC ++ A VF + + PD
Sbjct: 232 ACARSLAAREGQQVHGLVVKAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVF 291
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
+ ++ G+AQ G +A +LF +M +G E T S VLGAF G+Q+H+L+I
Sbjct: 292 LTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVI 351
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K F T+V N +++ YSKC L ES++ FDEM + VSWN++IA H E +
Sbjct: 352 KRCFGVNTYVCNGLVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQ 411
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALVDMY 424
L + M +G P T+ ++L+ S + + + G + + + G + + +VDM
Sbjct: 412 LFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDML 471
Query: 425 AKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQHG 459
+ G L+DA+ + D + N + W ++ + HG
Sbjct: 472 GRAGLLDDAKSFIEDGPFTDNALLWQALMGACSFHG 507
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 185/354 (52%), Gaps = 5/354 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+++ GF V N L+ Y + A+++F M E+NVI+W+A+ISG ++ + + +
Sbjct: 149 VVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWTAMISGMARAELYKES 208
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M+ V + N TY A+ ACA AR G+++HG + ++G E + HV + L+++
Sbjct: 209 FSLFGQMIRTV-DANNATYSCALLACARSLAAREGQQVHGLVVKAGFEDDLHVESGLMDV 267
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCGL+ A VF + E + + +L + Q G ++F +G I E +
Sbjct: 268 YSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTV 327
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++VLGA +G QIH+LV K + +V GL+N+Y+KC +L + RVF +
Sbjct: 328 SAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVRVFDEMPS 387
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ- 299
+ +W+++I +A+ G E LF M + G P++VTF +L A + V G +
Sbjct: 388 KNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEI 447
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF--DEMDEHDVVSWNALI 351
L+S+ + G V+D + LL+++ K+F D + + W AL+
Sbjct: 448 LNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDA-KSFIEDGPFTDNALLWQALM 500
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 193/607 (31%), Positives = 322/607 (53%), Gaps = 36/607 (5%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLIN---MYGKCGLLSSAQFVFDASLERNSISWVSLL 149
+S + IH +M ++GL ++ + LI + L+ A VFD+ E N + W ++
Sbjct: 16 QSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMF 75
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ + V L +++ G+ + ++ +L ACA + G QIH V K +
Sbjct: 76 RGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCD 135
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSN-------------------------------I 238
D +V LI +Y K + + A +VF I
Sbjct: 136 LDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEI 195
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ D+ +W+ALI GYA+ G EA++LF +M + + P E T VL A A GR
Sbjct: 196 PVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGR 255
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+HS I GF S + N ++D Y KC +E + F+ + DV+SWN LI G+
Sbjct: 256 QVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMN 315
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSNVVI 416
Y EA+ L ++ML G PN T +IL + + AI+ G+ H I K G + +
Sbjct: 316 LYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSL 375
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
++L+DMYAKCG + A++VFD + +++L SWN M+ G+A HG A +I+S M+++ I
Sbjct: 376 RTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGI 435
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
+P+D TF+G+LSAC H G+++ G H F SM D+ I+P+++H ++ L G + A
Sbjct: 436 EPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAE 495
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
E I S ++P+ V+W LL CK H ++ LG A+ ++ +P+++ ++++LSN+YA A
Sbjct: 496 EMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAG 555
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W+E AK R ++ +K +KK GCS E+ + +H F + +++ ++ ++ V L
Sbjct: 556 RWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLE 615
Query: 657 DGGYVPD 663
+ G+VPD
Sbjct: 616 EAGFVPD 622
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 147/551 (26%), Positives = 250/551 (45%), Gaps = 72/551 (13%)
Query: 1 MITSGFHPNVITYNHLL---LMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP 57
MI +G H + L+ ++ F + A +FD + E N++ W+ + G + P
Sbjct: 25 MIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHALSSDP 84
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
AL + M+ L PN YT+ + ACA R G++IHG + + G +L+ +V L
Sbjct: 85 VSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSL 144
Query: 118 INMYGKCGLLSSAQFVFDASLER-------------------------------NSISWV 146
I MY K G A+ VFD S R + +SW
Sbjct: 145 IAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWN 204
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+L+S Y + G + L++F K+ V E + +VL ACA ++++G Q+HS +
Sbjct: 205 ALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDH 264
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
+ + LI+LY KC +++ AS +F + D+ +W+ LIGGY + EA+ LF
Sbjct: 265 GFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 324
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM--GFSSFTFVANTVLDFYS 324
+M SG P+EVT +L A A + GR +H I K G S+ + + +++D Y+
Sbjct: 325 QEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYA 384
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
KC +E + + FD M + SWNA+I G A ++ M +G P+ T+
Sbjct: 385 KCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVG 444
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
+L+ S ++ G+ I ++ + Y +L + D
Sbjct: 445 LLSACSHSGMLDLGRH---------------IFRSMTEDYKITPKLEHYGCMID------ 483
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
L+G++ GL +EA E+ + M+ + P+ + +L AC G VE G +
Sbjct: 484 -------LLGHS--GLFKEAEEMINSME---MDPDGVIWCSLLKACKMHGNVELGESFAQ 531
Query: 505 SMIRDHGISPR 515
++I+ I P+
Sbjct: 532 NLIK---IEPK 539
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 211/457 (46%), Gaps = 72/457 (15%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLIN---LYAKCEKLDLASRVFSNI 238
S+L C L +L++ IH+ + K L + LI L + L A VF +I
Sbjct: 7 SLLHNCKTLQSLRI---IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSI 63
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
Q P+L W+ + G+A A+ L+V M S GL+P+ TF ++L A A K G+
Sbjct: 64 QEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQ 123
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA-- 356
Q+H ++K+G +V +++ Y K E++ K FD+ DVVS+ ALI G+ +
Sbjct: 124 QIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNG 183
Query: 357 -----------------------------SCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
+ +Y EA+EL K+M+ P+ T +L+
Sbjct: 184 YIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLS 243
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ +IE G+Q H I GF SN+ I +AL+D+Y KCG + A +F+ LS K+++S
Sbjct: 244 ACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVIS 303
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG-WHYFNSM 506
WNT++ GY L +EAL ++ M + PN+ T + +L AC H+G ++ G W +
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYID 363
Query: 507 IRDHGISPRMDHIASVVHL-------------------------------FACRGQTRRA 535
R G+S S++ + FA G+ A
Sbjct: 364 KRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPA 423
Query: 536 YEF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRY 569
++ ++ IEP+ + + LLS C L LGR+
Sbjct: 424 FDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRH 460
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/638 (30%), Positives = 327/638 (51%), Gaps = 4/638 (0%)
Query: 22 KFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVG 81
KFS DA+++F EM +R++ W+ L+ S+ E L +F M +P+ +T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 82 AVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
A+ AC + G+ IHG + + L + +V + LI MY KCG + A +FD +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGMQI 199
+ ++W S++S + + G ++ F + S V + +++ AC L N ++G +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
H V + D + L+N YAK A +F I D+ +WS +I Y Q G A
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
EA+ +F M G P+ T VL A A + GR+ H L I+ G + V+ +
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PN 378
+D Y KC EE+ F + DVVSW ALI+G + +IE ML E + P+
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 365
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
+L S++ +E K H ++K GFDSN IG++LV++Y++CG L +A KVF+
Sbjct: 366 AILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 425
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHIGLVE 497
++ K+ V W +++ GY HG G +ALE ++ M++ +++KPN+ TF+ +LSAC H GL+
Sbjct: 426 GIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIH 485
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
EG F M+ D+ ++P ++H A +V L G A E K P P + LL
Sbjct: 486 EGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGA 545
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
C+ H++ + A+K+ + ++++SNVY W+ K+R +K++ +KK
Sbjct: 546 CRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGL 605
Query: 618 GCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
S E++ K+H F + ++ ++ +L +H+
Sbjct: 606 AESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHM 643
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 226/446 (50%), Gaps = 8/446 (1%)
Query: 122 GKCGLLSS---AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
G C SS A+ +F +R+ W +LL S + + L F + F
Sbjct: 2 GFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNF 61
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFK-CALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ L AC L + G IH V K L D +V LI +Y KC ++ A R+F
Sbjct: 62 TLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFADVKETIG 296
++ PD+ WS+++ G+ + G +A++ F +M +S + P VT ++ A + +
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRL 181
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
GR +H +I+ GFS+ + N++L+ Y+K +E++ F + E DV+SW+ +IA ++
Sbjct: 182 GRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ 241
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ EA+ + DM+ +G PN+ T +L + +E G++TH ++ G ++ V +
Sbjct: 242 NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKV 301
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS-MMQENK 475
+ALVDMY KC +A VF + K++VSW ++ G+ +G+ ++E +S M+ EN
Sbjct: 302 STALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENN 361
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+P+ + VL +C +G +E+ F+S + +G AS+V L++ G A
Sbjct: 362 TRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ ++ + VVW L++G H
Sbjct: 421 SKVFNGIALK-DTVVWTSLITGYGIH 445
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 214/425 (50%), Gaps = 4/425 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV-LEP 74
L+ MY+K R+ +A ++FDE+ + ++++WS+++SGF + G P A+ +FR MV + P
Sbjct: 102 LIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP 161
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
+ T + VSAC ++R G+ +HG + R G + + N L+N Y K A +F
Sbjct: 162 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 221
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
E++ ISW ++++ Y Q G L +F G + + VL ACA +L+
Sbjct: 222 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 281
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G + H L + LE + V+ L+++Y KC + A VFS I D+ +W ALI G+
Sbjct: 282 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT 341
Query: 255 QLGKACEAIDLF-VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
G A +I+ F + + + P + VLG+ +++ + HS +IK GF S
Sbjct: 342 LNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 401
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
F+ ++++ YS+C L + K F+ + D V W +LI G+ +A+E M+
Sbjct: 402 FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS 461
Query: 374 GHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLN 431
PN T+ +IL+ S I G + +V N+ + LVD+ + G L+
Sbjct: 462 SEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 521
Query: 432 DARKV 436
A ++
Sbjct: 522 TAIEI 526
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 148/294 (50%), Gaps = 12/294 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF ++ N LL Y K +A LF + E++VISWS +I+ + Q G A
Sbjct: 189 VIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEA 248
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ EPN T + + ACA+ D G++ H R GLE VS L++M
Sbjct: 249 LLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 308
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG---EHVHGLKIFLL---SRKSGVA 174
Y KC A VF ++ +SWV+L+S + G + I LL +R +
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 368
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ VLG+C+ LG L+ HS V K + + F+ L+ LY++C L AS+V
Sbjct: 369 M-----VKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 423
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGA 287
F+ I L D W++LI GY GK +A++ F M SS + P+EVTF +L A
Sbjct: 424 FNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSA 477
>gi|449503129|ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 292/544 (53%), Gaps = 2/544 (0%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
YV + C D+R G IH + + L + N ++N Y KCG LS +FD
Sbjct: 218 YVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMP 277
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI-SEFSCASVLGACAVLGNLKVGM 197
ERN +SW ++++ + Q G L +F G + +EF+ S L AC++ L
Sbjct: 278 ERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSY 337
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
QI++ + + + F+ + + EKL A VF + D +W+A++ GY QL
Sbjct: 338 QIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLA 397
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
E + +M + P TF+ +L A + E G Q+H ++K G+ + V N
Sbjct: 398 YF-ELPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGN 456
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
++ D Y K + L + K FDEM DV SW + AG L +A++++ +M G
Sbjct: 457 SLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRL 516
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
N +T + LN +++ +IE GK+ H +K G D +V + +AL+DMYAKCG + A VF
Sbjct: 517 NKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVF 576
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
+ +++VSW TM++G+A +G +EAL+I+ M++ + +PN TFI VL+AC G ++
Sbjct: 577 RSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFID 636
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
E W YF+SM DHGI+P DH +V+L G + A + I P +P +VW+ LL
Sbjct: 637 EAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGA 696
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
C H D+ G+ AAE L+ D D S +I+LSN++A + WD +R++M+ + +KK
Sbjct: 697 CLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFAGGDNWDSVGILRELMETRDVKKVP 756
Query: 618 GCSW 621
G SW
Sbjct: 757 GSSW 760
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 196/388 (50%), Gaps = 3/388 (0%)
Query: 5 GFHP-NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
GF P ++ +NH+L YVK R++ +LFDEMPERNV+SWSA+I+GF Q G P AL+
Sbjct: 244 GFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSL 303
Query: 64 FRLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F M C + PN +T V A+ AC+ +I+ + R G N + N +
Sbjct: 304 FGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALI 363
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
+ L A VF++ L ++++SW ++++ Y Q + K + V F+ AS
Sbjct: 364 RHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLA-YFELPKFWRRMNLESVKPDNFTFAS 422
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L A L ++G+Q+H + K D V L ++Y K +KL + F + D
Sbjct: 423 ILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSD 482
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ +W+ + G Q G+ +A+ + +M + G+ ++ T + L + A++ G++ H
Sbjct: 483 VCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHG 542
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
L IK+G V N +LD Y+KC + + F MDE VVSW +I G + E
Sbjct: 543 LRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKE 602
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISS 390
A+++ +M PN T+ +LN S
Sbjct: 603 ALQIFDEMRKGEAEPNHITFICVLNACS 630
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 152/287 (52%), Gaps = 1/287 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ NV N L ++ ++ +A ++F+ ++ +SW+A+++G+ Q+ E+
Sbjct: 343 IVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYFELP 402
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++R M ++P+ +T+ ++ A+ + R G ++HG++ +SG + V N L +M
Sbjct: 403 -KFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDM 461
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K L FD + SW + + QCGE + LK+ + GV +++F+
Sbjct: 462 YVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRLNKFTL 521
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+ L +CA L +++ G + H L K + D V L+++YAKC + A+ VF ++
Sbjct: 522 ATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDE 581
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ +W+ +I G+A G+ EA+ +F +M P+ +TF VL A
Sbjct: 582 RSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNA 628
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 99/191 (51%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG+ ++ N L MYVK ++ D K FDEM +V SW+ + +G Q G P A
Sbjct: 443 LVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKA 502
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M + N +T A+++CA+ GK+ HG + G +++ V N L++M
Sbjct: 503 LKVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDM 562
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG ++SA VF + ER+ +SW +++ + G+ L+IF RK + +
Sbjct: 563 YAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITF 622
Query: 181 ASVLGACAVLG 191
VL AC+ G
Sbjct: 623 ICVLNACSQGG 633
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 192/638 (30%), Positives = 313/638 (49%), Gaps = 94/638 (14%)
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS--------------------- 151
VSNC+I+ Y + G L A+ +FD ERN +SW +L+S
Sbjct: 89 VSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQN 148
Query: 152 ----------YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS 201
+ + G + LK+F +SGV ++ + SV+ AC LG+ +GM I
Sbjct: 149 VVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILG 208
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW--------------- 246
LV K E V+ LI L + ++DLA RVF ++ D+ +W
Sbjct: 209 LVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLRE 268
Query: 247 ----------------SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
SA+I Y+Q G A EA+ LF KM G P+ F+ L A A
Sbjct: 269 ARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALAS 328
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
++ G +H + K+G F+ ++++D Y KC ++ FD + E +VV WN++
Sbjct: 329 LRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSM 388
Query: 351 -------------------------------IAGHLASCHYGEAIELLKDMLFEGHCPNL 379
IAG+L + + +E+ +L G PN
Sbjct: 389 VGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNK 448
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
T+S++L + I +++ G H I+K G ++ +G+AL DMYAKCG + +++VF+
Sbjct: 449 STFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFER 508
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE-NKIKPNDNTFIGVLSACVHIGLVEE 498
+ KN +SW M+ G A+ G E+L ++ M+ +++ PN+ + VL AC H GLV++
Sbjct: 509 MPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDK 568
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
G YFNSM + +GI P+ H VV L + G+ A EFI++ P +P W LLSGC
Sbjct: 569 GLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGC 628
Query: 559 KTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTG 618
K +KD + A+K+ +++ +++LSN+YA A W + + +RK+M+EK LKK G
Sbjct: 629 KKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGG 688
Query: 619 CSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
CSW E++N++H F + + Q +++ + L +
Sbjct: 689 CSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEML 726
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 215/503 (42%), Gaps = 126/503 (25%)
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK----------L 228
+C S+L + G + G +H+ + K +++A+ L+ LY C K
Sbjct: 23 TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82
Query: 229 DLASRVFSN------IQLPDL---------------TAWSALIGGYAQLGKA-------- 259
D + V SN +Q +L +WSALI G + G+
Sbjct: 83 DGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFE 142
Query: 260 -----------------------CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
EA+ LF ++ SG+ P++VTF+ V+ A ++ +
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 297 GRQLHSLIIKMGFSSFTFVANT-------------------------------VLDFYSK 325
G + L++K GF + V+N+ +LD Y +
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
L E+ + FDEM E + +SW+A+IA + S + EA++L M+ EG PN+ ++
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L+ + + A+ G H + K G D +V IGS+L+D+Y KCG+ +D R VFD + KN+
Sbjct: 323 LSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNV 382
Query: 446 VSWNTMLVGYAQHGLG-------------------------------REALEIYSMMQEN 474
V WN+M+ GY+ +G + LE+++ + +
Sbjct: 383 VCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVS 442
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
PN +TF VL AC I +++G + +I+ GI + ++ ++A G
Sbjct: 443 GQTPNKSTFSSVLCACASIASLDKGMNVHGKIIK-LGIQYDIFVGTALTDMYAKCGDIGS 501
Query: 535 AYEFIKSSPIEPNKVVWRCLLSG 557
+ + + P E N++ W ++ G
Sbjct: 502 SKQVFERMP-EKNEISWTVMIQG 523
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 162/350 (46%), Gaps = 63/350 (18%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNV------------------- 41
++ +GF + N L+ + ++ I+ A+++FD M +R+V
Sbjct: 210 VVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREA 269
Query: 42 ------------ISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASR 89
ISWSA+I+ +SQ G E AL F MV +PN + +SA AS
Sbjct: 270 RRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASL 329
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
+G IHG + + G++ + + + LI++Y KCG + VFD LE+N + W S++
Sbjct: 330 RALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMV 389
Query: 150 SSY---------------------CQCGEHVHG----------LKIFLLSRKSGVAISEF 178
Y G + G L++F SG ++
Sbjct: 390 GGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKS 449
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +SVL ACA + +L GM +H + K +++D FV L ++YAKC + + +VF +
Sbjct: 450 TFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERM 509
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGA 287
+ +W+ +I G A+ G A E++ LF +M +S + P+E+ VL A
Sbjct: 510 PEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFA 559
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G ++ L MY K I ++++F+ MPE+N ISW+ +I G ++ G +
Sbjct: 474 IIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVES 533
Query: 61 LNYFRLM-VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLI 118
L F M + PN + + AC+ G G M + G++ C++
Sbjct: 534 LILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVV 593
Query: 119 NMYGKCGLLSSA-QFVFDASLERNSISWVSLLS 150
++ + G L A +F+ + + +W +LLS
Sbjct: 594 DLLSRSGRLYEAEEFIRTIPFQPEANAWAALLS 626
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 273/485 (56%), Gaps = 1/485 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S++ ACA +L IH+ + F+ LI+LY KC + A RVF +
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W++LI GYAQ EA+ L M P+ TF+ +L A + G Q+H
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+L +K + +V + +LD Y++C ++ ++ FD+++ + VSWNALIAG
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+ + +M G +TYS++ + + I A+E GK H ++K G + +G+ ++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAK G + DARKVFD + K++V+WN+ML +AQ+GLGREA+ + M++ + N
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ +L+AC H GLV+EG YF+ M++++ + P +DH +VV L G A FI
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFD-MMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P++P VW LL C+ HK+ +G++AA+ + DP+DT ++L N+YA WD
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 487
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A+VRK+MK +KK+ CSW E++N +H F + + ++++ ++S+ + GYV
Sbjct: 488 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYV 547
Query: 662 PDPIY 666
P+ Y
Sbjct: 548 PNTDY 552
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 179/358 (50%), Gaps = 6/358 (1%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y ++ACA + IH + S + + N LI++Y KCG ++ A+ VFD
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
R+ SW SL++ Y Q L + + + F+ AS+L A + +G Q
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
IH+L K D +V L+++YA+C ++D+A VF ++ + +W+ALI G+A+ G
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
+ +F +M +G + T+S V A A + G+ +H+ +IK G FV NT
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 306
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---EAIELLKDMLFEGH 375
+LD Y+K + ++ K FD +D+ DVV+WN+++ A YG EA+ ++M G
Sbjct: 307 ILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLT---AFAQYGLGREAVTHFEEMRKCGV 363
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
N T+ +IL S ++ GKQ + + + + +VD+ + G LNDA
Sbjct: 364 HLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDA 421
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 187/374 (50%), Gaps = 8/374 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S F +V N L+ +Y K + DA+++FD MP R++ SW++LI+G++Q MP+ AL
Sbjct: 93 SQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGL 152
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
M+ +PN +T+ + A + + G++IH + + +V + L++MY +
Sbjct: 153 LPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYAR 212
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + A VFD +N +SW +L++ + + G+ L +F +++G + F+ +SV
Sbjct: 213 CGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSV 272
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
A A +G L+ G +H+ + K FV ++++YAK + A +VF + D+
Sbjct: 273 FSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDV 332
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W++++ +AQ G EA+ F +M G+ +++TF +L A + G+Q +
Sbjct: 333 VTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDM 392
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS-WNALIAGHLASC--HY 360
+ + TV+D + LL ++L +M + W AL L SC H
Sbjct: 393 MKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGAL----LGSCRMHK 448
Query: 361 GEAI-ELLKDMLFE 373
I + D +FE
Sbjct: 449 NAKIGQFAADHVFE 462
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 37/235 (15%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI SG + N +L MY K + DA+K+FD + +++V++W+++++ F+Q G+ A
Sbjct: 292 MIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREA 351
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ +F M C + N T++ ++AC+ G + GK+ M LE ++++
Sbjct: 352 VTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDL 411
Query: 121 YGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
G+ GLL+ A F+F ++ + W +L
Sbjct: 412 LGRAGLLNDALVFIFKMPMKPTAAVWGAL------------------------------- 440
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
LG+C + N K+G VF+ + D + L N+YA + D A+RV
Sbjct: 441 ----LGSCRMHKNAKIGQFAADHVFELDPD-DTGPPVLLYNIYASTGQWDAAARV 490
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y +++ + +++ + H + F +V + ++L+ +Y KCG + DAR+VFD +
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC----------- 490
++++ SW +++ GYAQ+ + EAL + M + KPN TF +L A
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 491 VHIGLVEEGWH---YFNSMIRD-HGISPRMDHIASV 522
+H V+ WH Y S + D + RMD +V
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAV 222
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/671 (29%), Positives = 344/671 (51%), Gaps = 4/671 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDE--MPERNVISWSALISGFSQIGMPEV 59
+ G+ V N L+ MY K + A+ LFD M + + +SW+++IS G
Sbjct: 172 VKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLE 231
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL+ FR M + N YT+V A+ + G IHG + +S + +V+N LI
Sbjct: 232 ALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIA 291
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG + A VF++ L R+ +SW +LLS Q + L F + SG + S
Sbjct: 292 MYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVS 351
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+++ A GNL G ++H+ + L+ + + L+++YAKC + F +
Sbjct: 352 VLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMH 411
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
DL +W+ +I GYAQ EAI+LF K+ G+ + VL A + +K R+
Sbjct: 412 EKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIRE 471
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H + K + + N +++ Y + ++ + + F+ + D+VSW ++I + +
Sbjct: 472 IHGYVFKRDLADI-MLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGL 530
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA+EL + P+ + L+ ++++ +++ GK+ H +++ GF I S+
Sbjct: 531 PVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASS 590
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMYA CG + ++RK+F + ++L+ W +M+ HG G +A+ ++ M + + P+
Sbjct: 591 LVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPD 650
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ +L AC H GL+ EG +F M + + P +H A +V L + AY F+
Sbjct: 651 HITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFV 710
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
++ PI+P+ +W LL C H + LG AA+++L +D E++ + ++SN++A W+
Sbjct: 711 RNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWN 770
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL-FDG 658
+ +VR MK LKK+ GCSW E+ NK+H F + Q D++ + Q + L G
Sbjct: 771 DVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEKKG 830
Query: 659 GYVPDPIYSSH 669
GY+ + H
Sbjct: 831 GYIAQTKFVFH 841
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 159/560 (28%), Positives = 294/560 (52%), Gaps = 11/560 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H + L+LMY K + DA K+FDEM ER + SW+AL+ F G A+ ++
Sbjct: 76 HLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKD 135
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + + T+ + AC + G++R G EIHG + G V N LI MYGKCG
Sbjct: 136 MRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGD 195
Query: 127 LSSAQFVFDASL--ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L A+ +FD + + +++SW S++S++ G + L +F ++ GVA + ++ + L
Sbjct: 196 LGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAAL 255
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+K+GM IH V K D +VA LI +YAKC +++ A RVF ++ D
Sbjct: 256 QGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYV 315
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ L+ G Q +A++ F M +SG P +V+ ++ A + G+++H+
Sbjct: 316 SWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYA 375
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
I+ G S + NT++D Y+KC ++ F+ M E D++SW +IAG+ + + EAI
Sbjct: 376 IRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAI 435
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
L + + +G + ++L S + + + ++ H + K +++++ +A+V++Y
Sbjct: 436 NLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVY 494
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+ G ++ AR+ F+ + SK++VSW +M+ +GL EALE++ +++ I+P+ I
Sbjct: 495 GEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAII 554
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG---QTRRAYEFIKS 541
LSA ++ +++G +IR G +S+V ++AC G +R+ + +K
Sbjct: 555 SALSATANLSSLKKGKEIHGFLIRK-GFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQ 613
Query: 542 SPIEPNKVVWRCLLSGCKTH 561
+ ++W +++ H
Sbjct: 614 RDL----ILWTSMINANGMH 629
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 238/483 (49%), Gaps = 23/483 (4%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
C + G+++H + +S L++ ++ L+ MYGKCG L A VFD ER SW
Sbjct: 56 CVAAKALPQGQQLHALLLKS--HLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSW 113
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+L+ ++ G+++ ++++ R GVAI + SVL AC LG ++G +IH + K
Sbjct: 114 NALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVK 173
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL--PDLTAWSALIGGYAQLGKACEAI 263
C FV LI +Y KC L A +F I + D +W+++I + G EA+
Sbjct: 174 CGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEAL 233
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
LF +M G+ + TF L D G +H ++K + +VAN ++ Y
Sbjct: 234 SLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMY 293
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+KC +E++ + F+ M D VSWN L++G + + Y +A+ +DM G P+ +
Sbjct: 294 AKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVL 353
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
N++ S + GK+ H ++ G DSN+ IG+ LVDMYAKC + F+ + K
Sbjct: 354 NLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEK 413
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
+L+SW T++ GYAQ+ EA+ ++ +Q + + VL AC G
Sbjct: 414 DLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRAC-------SGLKSR 466
Query: 504 NSMIRDHGISPRMDHI-----ASVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRCLL 555
N + HG + D ++V+++ G RRA+E I+S I V W ++
Sbjct: 467 NFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDI----VSWTSMI 522
Query: 556 SGC 558
+ C
Sbjct: 523 TCC 525
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 197/386 (51%), Gaps = 1/386 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S +V N L+ MY K R+ DA ++F+ M R+ +SW+ L+SG Q + A
Sbjct: 274 VLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDA 333
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
LNYFR M +P+ + + ++A G+ GKE+H R+GL+ N + N L++M
Sbjct: 334 LNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDM 393
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + F+ E++ ISW ++++ Y Q H+ + +F + G+ +
Sbjct: 394 YAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMI 453
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL AC+ L + +IH VFK L D + ++N+Y + +D A R F +I+
Sbjct: 454 GSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIRS 512
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W+++I G EA++LF + + + P + L A A++ G+++
Sbjct: 513 KDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEI 572
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +I+ GF +A++++D Y+ C +E S K F + + D++ W ++I +
Sbjct: 573 HGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCG 632
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNIL 386
+AI L K M + P+ T+ +L
Sbjct: 633 NKAIALFKKMTDQNVIPDHITFLALL 658
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 195/380 (51%), Gaps = 12/380 (3%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L C L G Q+H+L+ K L F+A L+ +Y KC L A +VF +
Sbjct: 52 LLDLCVAAKALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVFDEMSERT 109
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ +W+AL+G + GK EAI+L+ M G+ TF VL A + E+ G ++H
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE--MDEHDVVSWNALIAGHLASCHY 360
+ +K G+ F FV N ++ Y KC L + FD M++ D VSWN++I+ H+A +
Sbjct: 170 VAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ L + M G N YT+ L D ++ G H ++K ++V + +AL
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANAL 289
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MYAKCGR+ DA +VF+ + ++ VSWNT+L G Q+ L +AL + MQ + KP+
Sbjct: 290 IAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQ 349
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA---CRGQTRRAYE 537
+ + +++A G + +G IR+ G+ M ++V ++A C A+E
Sbjct: 350 VSVLNLIAASGRSGNLLKGKEVHAYAIRN-GLDSNMQIGNTLVDMYAKCCCVKYMGHAFE 408
Query: 538 FIKSSPIEPNKVVWRCLLSG 557
+ E + + W +++G
Sbjct: 409 CMH----EKDLISWTTIIAG 424
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 273/485 (56%), Gaps = 1/485 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S++ ACA +L IH+ + F+ LI+LY KC + A RVF +
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ +W++LI GYAQ EA+ L M P+ TF+ +L A + G Q+H
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+L +K + +V + +LD Y++C ++ ++ FD+++ + VSWNALIAG
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+ + +M G +TYS++ + + I A+E GK H ++K G + +G+ ++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAK G + DARKVFD + K++V+WN+ML +AQ+GLGREA+ + M++ + N
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ +L+AC H GLV+EG YF+ M++++ + P +DH +VV L G A FI
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFD-MMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P++P VW LL C+ HK+ +G++AA+ + DP+DT ++L N+YA WD
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 487
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A+VRK+MK +KK+ CSW E++N +H F + + ++++ ++S+ + GYV
Sbjct: 488 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYV 547
Query: 662 PDPIY 666
P+ Y
Sbjct: 548 PNTDY 552
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 179/358 (50%), Gaps = 6/358 (1%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y ++ACA + IH + S + + N LI++Y KCG ++ A+ VFD
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
R+ SW SL++ Y Q L + + + F+ AS+L A + +G Q
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
IH+L K D +V L+++YA+C ++D+A VF ++ + +W+ALI G+A+ G
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
+ +F +M +G + T+S V A A + G+ +H+ +IK G FV NT
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 306
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---EAIELLKDMLFEGH 375
+LD Y+K + ++ K FD +D+ DVV+WN+++ A YG EA+ ++M G
Sbjct: 307 ILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLT---AFAQYGLGREAVTHFEEMRKCGV 363
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
N T+ +IL S ++ GKQ + + + + +VD+ + G LNDA
Sbjct: 364 HLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDA 421
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 187/374 (50%), Gaps = 8/374 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S F +V N L+ +Y K + DA+++FD MP R++ SW++LI+G++Q MP+ AL
Sbjct: 93 SQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGL 152
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
M+ +PN +T+ + A + + G++IH + + +V + L++MY +
Sbjct: 153 LPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYAR 212
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + A VFD +N +SW +L++ + + G+ L +F +++G + F+ +SV
Sbjct: 213 CGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSV 272
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
A A +G L+ G +H+ + K FV ++++YAK + A +VF + D+
Sbjct: 273 FSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDV 332
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W++++ +AQ G EA+ F +M G+ +++TF +L A + G+Q +
Sbjct: 333 VTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDM 392
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS-WNALIAGHLASC--HY 360
+ + TV+D + LL ++L +M + W AL L SC H
Sbjct: 393 MKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGAL----LGSCRMHK 448
Query: 361 GEAI-ELLKDMLFE 373
I + D +FE
Sbjct: 449 NAKIGQFAADHVFE 462
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 37/235 (15%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI SG + N +L MY K + DA+K+FD + +++V++W+++++ F+Q G+ A
Sbjct: 292 MIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREA 351
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ +F M C + N T++ ++AC+ G + GK+ M LE ++++
Sbjct: 352 VTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDL 411
Query: 121 YGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
G+ GLL+ A F+F ++ + W +L
Sbjct: 412 LGRAGLLNDALVFIFKMPMKPTAAVWGAL------------------------------- 440
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
LG+C + N K+G VF+ + D + L N+YA + D A+RV
Sbjct: 441 ----LGSCRMHKNAKIGQFAADHVFELDPD-DTGPPVLLYNIYASTGQWDAAARV 490
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y +++ + +++ + H + F +V + ++L+ +Y KCG + DAR+VFD +
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC----------- 490
++++ SW +++ GYAQ+ + EAL + M + KPN TF +L A
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 491 VHIGLVEEGWH---YFNSMIRD-HGISPRMDHIASV 522
+H V+ WH Y S + D + RMD +V
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAV 222
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/570 (31%), Positives = 305/570 (53%), Gaps = 33/570 (5%)
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A VF + E N +SW +++ + + + L +++ G++ + ++ + +
Sbjct: 28 LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE-------------------- 226
CA + G QIH+ + K L D V LI++YA+
Sbjct: 88 CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147
Query: 227 -----------KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
+D A ++F I + D+ +W+A+I GYA++G+ EA++LF +M +
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P E T + VL GRQ+HS I GF S + N ++D YSKC +E +
Sbjct: 208 PDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGL 267
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F+ + DV+SWN LI G+ H+ EA+ + ++ML G PN T +IL + + AI
Sbjct: 268 FEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAI 327
Query: 396 EWGKQTHCCIVKP--GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
+ G+ H I K G +N + ++L+DMYAKCG + A +VFD + +K+L S N M+
Sbjct: 328 DIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIF 387
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
G+A HG A ++ S M+++ I+P+D TF+G+LSAC H GL + G F SM D+ I
Sbjct: 388 GFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIE 447
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEK 573
P+++H ++ L G + A E I S +EP+ V+W LL CK HK+L LG A+K
Sbjct: 448 PKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQK 507
Query: 574 ILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
++ +P++ ++++LSN+YA + WD+ A+VR ++ +K LKK GCS E+ + +H F
Sbjct: 508 LMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLI 567
Query: 634 SRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
Q ++++++ ++ L + G+V D
Sbjct: 568 GDKFHPQNKEIYKMLEEIDSLLAETGFVSD 597
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 233/493 (47%), Gaps = 49/493 (9%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A +F + E N +SW+ +I G + P ALN + M+ L PN YT+ +CA
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER-------- 140
A+ GK+IH ++ + GL ++ HV LI+MY + G++ A VFD S R
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 141 -----------------------NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+ +SW +++S Y + G + L++F K V E
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ A+VL C GN+++G QIHS + + + LI+LY+KC +++ A +F
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+Q D+ +W+ LIGGYA + EA+ +F +M G P++VT +L A A + G
Sbjct: 271 LQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIG 330
Query: 298 RQLHSLIIK--MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
R +H I K G + T + +++D Y+KC +E + + FD + + S NA+I G
Sbjct: 331 RWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFA 390
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGF 410
A +LL M +G P+ T+ +L+ S + G++ + ++P
Sbjct: 391 MHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKL 450
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ ++D+ + G +A ++ + ++ + V W ++L H + LE+
Sbjct: 451 EHY----GCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIH----KNLELGE 502
Query: 470 MMQEN--KIKPND 480
++ + KI+P +
Sbjct: 503 LIAQKLMKIEPKN 515
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 199/394 (50%), Gaps = 14/394 (3%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H +V++Y ++ Y ++ AQK+FDE+P ++V+SW+A+ISG+++IG + AL F
Sbjct: 141 HRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNE 200
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ ++P+ T +S C G+ G++IH + G N + N LI++Y KCG
Sbjct: 201 MMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGE 260
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ A +F+ ++ ISW +L+ Y H L +F K G ++ + S+L A
Sbjct: 261 MERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPA 320
Query: 187 CAVLGNLKVGMQIHSLVFK--CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
CA LG + +G IH + K + + + LI++YAKC ++ A++VF I L+
Sbjct: 321 CAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLS 380
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL-HSL 303
+ +A+I G+A G+A A DL +M G+ P ++TF +L A + + GR++ S+
Sbjct: 381 SCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSM 440
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGE 362
+ ++D + L +E+ + + M E D V W +L L +C +
Sbjct: 441 TLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSL----LKACKIHK 496
Query: 363 AIEL-----LKDMLFEGHCPNLYT-YSNILNISS 390
+EL K M E P Y SNI S+
Sbjct: 497 NLELGELIAQKLMKIEPKNPGSYVLLSNIYATSA 530
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 15/263 (5%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N+ N L+ +Y K + A LF+ + ++VISW+ LI G++ I + AL F
Sbjct: 240 GFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVF 299
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR--SGLELNSHVSNCLINMYG 122
+ M+ PN T + + ACA G G+ IH + + G+ N+ + LI+MY
Sbjct: 300 QEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYA 359
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG + +A VFD L ++ S +++ + G + +K G+ + +
Sbjct: 360 KCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVG 419
Query: 183 VLGACAVLGNLKVGMQIH---SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+L AC+ G +G +I +L ++ + + + M I+L + A + +++
Sbjct: 420 LLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCM--IDLLGRSGLFKEAEELINSMT 477
Query: 240 L-PDLTAWSALIGGYAQLGKACE 261
+ PD W +L+ KAC+
Sbjct: 478 MEPDGVIWGSLL-------KACK 493
>gi|449453244|ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Cucumis sativus]
Length = 735
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/619 (30%), Positives = 332/619 (53%), Gaps = 14/619 (2%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P+V ++ LL K I A ++FD MP+ NV W+A+I+G ++ G+ VA+N F M
Sbjct: 124 PDVYSWTTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEM 183
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
++P+ Y++ +S C + G+++H + ++G + V N LI MY L
Sbjct: 184 HKMGVKPDNYSFACILSLCTKEIEDL-GRQVHSSVIKAGYLRKTSVVNALITMYFSIENL 242
Query: 128 SSAQFVFDA--SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
A VF+ S R+ I++ ++ + L +F +++ ++ +E + S++
Sbjct: 243 EDAYEVFEGTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMS 302
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
+C+++ +V Q+HS K E V I +Y C + A+ VF + DL +
Sbjct: 303 SCSII---QVAQQVHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLIS 359
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA--FADVKETIGGRQLHSL 303
W+A+I Y Q A+ F++M +G+ P E TF +LG F ++ E + H+
Sbjct: 360 WNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIVEMV-----HAY 414
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
+ K G + N ++ Y+KC +++SL+ F E++ +++SWN +I G L + +A
Sbjct: 415 VYKNGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQA 474
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+E ++ P+ +T S +L+I ++I ++ GKQ H I++ G S + + L+ M
Sbjct: 475 LEHFSKLIMSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITM 534
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE-NKIKPNDNT 482
Y+KCG L + + F+ + +++VSWN+++ YAQHG G+EA++ + MQ+ I P+ T
Sbjct: 535 YSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQAT 594
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F +LSAC H GLVEE + M+ D+ P +D ++ +V L G +A I+S+
Sbjct: 595 FTTILSACSHAGLVEEACQILDIMLIDYRAVPSVDQLSCIVDLIGRSGYIDQAESVIESA 654
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
+ VW L S C H++L LGR A +L + ++ S +++LSN+YA A W+E A
Sbjct: 655 QYGEHTHVWWALFSACAAHENLRLGRIVARILLEKERDNPSVYVVLSNIYASAGCWEEAA 714
Query: 603 KVRKIMKEKSLKKDTGCSW 621
VR+++K+ K GCSW
Sbjct: 715 NVRELIKKTGSMKQPGCSW 733
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 150/579 (25%), Positives = 269/579 (46%), Gaps = 52/579 (8%)
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC---- 124
C ++P++Y ++ CA+ D G ++HG RSGL+ HV+N ++++Y K
Sbjct: 53 CFNIKPDHYNLSTTLAVCANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFV 112
Query: 125 ---------------------------GLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
G + A +FD + N W ++++ + G
Sbjct: 113 SLKRGFQEIEKPDVYSWTTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGL 172
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
+ F K GV +S A +L C +G Q+HS V K V
Sbjct: 173 DWVAMNTFYEMHKMGVKPDNYSFACILSLCTKEIE-DLGRQVHSSVIKAGYLRKTSVVNA 231
Query: 218 LINLYAKCEKLDLASRVFSNI--QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
LI +Y E L+ A VF ++ D ++ +I G + + EA+ +F M + L
Sbjct: 232 LITMYFSIENLEDAYEVFEGTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLS 291
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P+E+TF ++ + + ++ +Q+HS IK+GF SFT V N+ + Y+ C + +
Sbjct: 292 PTELTFVSIMSSCSIIQV---AQQVHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAV 348
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F + E D++SWNA+I+ ++ A+ M G P+ +T+ ++L +S I +
Sbjct: 349 FQMLIEKDLISWNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIV 408
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
E H + K G + I +ALV YAKC ++ + +VF ++SKN++SWNT++ G+
Sbjct: 409 E---MVHAYVYKNGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGF 465
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
+GL +ALE +S + +K+KP+ T VLS C +I ++ G ++R G S
Sbjct: 466 LLNGLPLQALEHFSKLIMSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRS-GNSSE 524
Query: 516 MDHIASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH---KDLVLGRY 569
++ +++ G + R + + IE + V W ++S H K+ V
Sbjct: 525 TSLCNGLITMYSKCGLLGWSLRTFNVM----IERDIVSWNSIISAYAQHGQGKEAVDCFK 580
Query: 570 AAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
A + + S P+ + +LS + A + +E ++ IM
Sbjct: 581 AMQDMPSIMPDQATFTTILSAC-SHAGLVEEACQILDIM 618
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 142/287 (49%), Gaps = 4/287 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF + N + MY A +F + E+++ISW+A+IS + Q + A+
Sbjct: 318 IKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNAIISSYVQGNFGKSAV 377
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + P+ +T+ G++ + + + +H +Y++GL L + N L++ Y
Sbjct: 378 LAFLQMQRTGIGPDEFTF-GSLLGVSEFIEIV--EMVHAYVYKNGLILIIEILNALVSAY 434
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + + VF +N ISW +++ + G + L+ F S + S F+ +
Sbjct: 435 AKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQALEHFSKLIMSKLKPSTFTLS 494
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
VL CA + L +G QIH + + + + GLI +Y+KC L + R F+ +
Sbjct: 495 IVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITMYSKCGLLGWSLRTFNVMIER 554
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGA 287
D+ +W+++I YAQ G+ EA+D F M +MP + TF+ +L A
Sbjct: 555 DIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQATFTTILSA 601
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 132/293 (45%), Gaps = 37/293 (12%)
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSS---GLMPSEVTFSYVLGAFADVKETIGGR 298
DL ++ L+ + + +++ LF ++ SS + P S L A+ ++ G
Sbjct: 21 DLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLAVCANFRDIAFGS 80
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCE------------------------------- 327
QLH I+ G + VANTVL Y+K E
Sbjct: 81 QLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSWTTLLSACTKMG 140
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
+E + + FD M + +V WNA+I G S A+ +M G P+ Y+++ IL+
Sbjct: 141 HIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGVKPDNYSFACILS 200
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS--KNL 445
+ + + G+Q H ++K G+ + +AL+ MY L DA +VF+ S ++
Sbjct: 201 LCTK-EIEDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEVFEGTESEVRDQ 259
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+++N M+ G EAL ++ M+ + P + TF+ ++S+C I + ++
Sbjct: 260 ITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSCSIIQVAQQ 312
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 106/262 (40%), Gaps = 39/262 (14%)
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC----PNLYTYSNILN 387
SLKT E D++ +N L+A S Y ++++L + HC P+ Y S L
Sbjct: 10 SLKTIAESASQDLLEYNRLLAELKRSSRYIDSLQLFTQ-IHSSHCFNIKPDHYNLSTTLA 68
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ ++ I +G Q H ++ G + + ++ +YAK ++ F + ++ S
Sbjct: 69 VCANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYS 128
Query: 448 -------------------------------WNTMLVGYAQHGLGREALEIYSMMQENKI 476
WN M+ G A+ GL A+ + M + +
Sbjct: 129 WTTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGV 188
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP++ +F +LS C +E+ +S + G + + +++ ++ AY
Sbjct: 189 KPDNYSFACILSLCTK--EIEDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAY 246
Query: 537 EFIKSSPIE-PNKVVWRCLLSG 557
E + + E +++ + ++ G
Sbjct: 247 EVFEGTESEVRDQITYNVMIDG 268
>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/634 (29%), Positives = 329/634 (51%), Gaps = 4/634 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G + N + Y+K+ ++ AQ+ FD ++ +SW+ ++ G G
Sbjct: 73 LIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAG 132
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F +PN + + + A G HG ++RSG V N L+++
Sbjct: 133 LCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSL 192
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
Y + + + + + S+ + +SW ++ + Q GE G +F + ++G+ +
Sbjct: 193 YAEVHMYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVT 252
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL AC L ++ +G +H LV LE D FV LI++Y+KC + A + F I
Sbjct: 253 VVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIP 312
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+ ++ Y EA+ L M G EVT + VL +++ R
Sbjct: 313 EKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRS 372
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +II+ G+ S + N+V+D Y+KC L+E + FD M++ DVV+W+ +IAG +
Sbjct: 373 VHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGK 432
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EAI + K M E PN + N++ + + K H V+ G S V IG++
Sbjct: 433 PDEAISVFKQM-NEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIGTS 491
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
++DMY+KCG + + + F+ + KN+V W+ M+ + +GL EAL ++ +++N KPN
Sbjct: 492 IIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPN 551
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
T + +LSAC H GL+EEG +F SM++ HGI P ++H + +V + + G+ A E I
Sbjct: 552 AVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELI 611
Query: 540 KSSP--IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
+ P +E +W LLS C+++ ++ LG AA ++L +P ++ +++ SN+YA +
Sbjct: 612 EKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGL 671
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
++AK+R++ KEK +K G S + ++ F
Sbjct: 672 MIDSAKMRRLAKEKGVKVVAGYSLVHINSQTWRF 705
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 260/502 (51%), Gaps = 14/502 (2%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
G +HG + + G + ++ ++N I+ Y K G L SAQ FD++ ++S+SW ++
Sbjct: 66 GTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFS 125
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
G + GL F+ R + + S V+ A L G H +F+ V
Sbjct: 126 NGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSV 185
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLP-DLTAWSALIGGYAQLGKACEAIDLFVKMFS-S 272
L++LYA+ + A ++F + + D+ +WS +IGG+ Q+G+ + +F M + +
Sbjct: 186 QNSLLSLYAEVH-MYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEA 244
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G+ P VT VL A ++K+ G +H L+I G FV N+++D YSKC + +
Sbjct: 245 GIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSA 304
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
K F E+ E +++SWN +++ ++ + + EA+ LL M+ EG + T +N+L I+
Sbjct: 305 FKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHF 364
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+ H I++ G++SN ++ ++++D YAKC + AR VFD ++ K++V+W+TM+
Sbjct: 365 LDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMI 424
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC-VHIGLVEEGWHYFNSMIRDHG 511
G+A++G EA+ ++ M E I PN+ + + ++ AC V L + W + ++ R G
Sbjct: 425 AGFARNGKPDEAISVFKQMNEEVI-PNNVSIMNLMEACAVSAELRQSKWAHGIAVRR--G 481
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK----THKDLVLG 567
++ + S++ +++ G + P + N V W ++S + H+ L+L
Sbjct: 482 LASEVAIGTSIIDMYSKCGDIEASIRAFNQIP-QKNVVCWSAMISAFRINGLAHEALML- 539
Query: 568 RYAAEKILSTDPEDTSAHIMLS 589
+ K T P +A +LS
Sbjct: 540 -FEKIKQNGTKPNAVTALSLLS 560
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 170/362 (46%), Gaps = 7/362 (1%)
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE-FSCASVLGACAVLGN 192
F A L + + +S + G L+++ R SG +S+ + S+L AC+ +
Sbjct: 6 FQAGLRLSDL--ISKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNT-S 62
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+G +H + K + +A I+ Y K LD A R F + + D +W+ ++ G
Sbjct: 63 FNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHG 122
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
G + F+K + P+ + V+ AF ++K G H I + GFS+
Sbjct: 123 NFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAI 182
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V N++L Y++ + + K F EM +DVVSW+ +I G + + + ++M+
Sbjct: 183 LSVQNSLLSLYAEVHMY-FAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMV 241
Query: 372 FE-GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
E G P+ T ++L +++ I G H ++ G + ++ +G++L+DMY+KC +
Sbjct: 242 TEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNV 301
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ A K F + KN++SWN ML Y + EAL + M + ++ T VL
Sbjct: 302 HSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIA 361
Query: 491 VH 492
H
Sbjct: 362 KH 363
>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Brachypodium distachyon]
Length = 689
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 197/646 (30%), Positives = 344/646 (53%), Gaps = 10/646 (1%)
Query: 13 YNHLLLMY-VKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
+N LL Y + + A+++FDE+P + SW++L++ G A R M
Sbjct: 27 WNQLLTAYSLSPLGLAAARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQG 86
Query: 72 LEPNYYTYVGAV-SACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
+ N + ++ SA A+R A G ++ ++SGL N ++ L++MY KCG + A
Sbjct: 87 VAANTFALGSSLRSAAAARCPAL-GAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDA 145
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
+ VFD ERN++SW +L++ Y + G+ + L++F+ + E + A++L A
Sbjct: 146 RRVFDGMPERNTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATFAALLTAFDD- 204
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-QLPDLTAWSAL 249
N + Q+H + K V+ I Y++C L + R+F I DL +W+A+
Sbjct: 205 SNYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAM 264
Query: 250 IGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+G Y G +A+ FV+M SG+ +F+ ++ + + GR +H L+IK G
Sbjct: 265 LGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTCPE-HDDHQGRAIHGLVIKNG 323
Query: 309 FSSFTFVANTVLDFYSKCE---LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
T V N ++ Y++ ++E++ K FD + D VSWN+++ G+ +A+
Sbjct: 324 LEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALR 383
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
+ M + Y +S L S++ ++ G+Q H I+ GF SN + S+L+ MY+
Sbjct: 384 FFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYS 443
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
K G L+DA+K F+ + V WN+M+ GYAQHG +++ M E K+ + TF+G
Sbjct: 444 KSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVG 503
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
++++C H GLV+EG N+M +GI RM+H A V L+ GQ +A E I S P E
Sbjct: 504 LITSCSHAGLVDEGSEILNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKELIDSMPFE 563
Query: 546 PNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVR 605
P+ +VW LL C+ H ++ L A +L ++P+ S +I+LS++Y+ MW + A V+
Sbjct: 564 PDAMVWMTLLGACRIHGNMELASEVASHLLVSEPKQHSTYILLSSMYSGLGMWSDRAIVQ 623
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
+ MK + L K G SW E++N++H F+ + + +++E+++ L
Sbjct: 624 REMKNRGLSKVPGWSWIEVKNEVHSFNAEDRSHPRMDEIYEMLSLL 669
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 156/557 (28%), Positives = 272/557 (48%), Gaps = 41/557 (7%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG NV + LL MY K R+ DA+++FD MPERN +SW+ALI+G+ + G AL
Sbjct: 120 SGLADNVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSWNALIAGYVESGKVLQALEL 179
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F M L P+ T+ ++A + ++HG++ + G L VSN I Y +
Sbjct: 180 FINMETERLVPDEATFAALLTAF-DDSNYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQ 238
Query: 124 CGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCA 181
CG L+ ++ +FD R+ ISW ++L +Y G + F+ + R+SGV + +S
Sbjct: 239 CGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFT 298
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK---LDLASRVFSNI 238
S++ C + + G IH LV K LE V LI +Y + ++ A + F ++
Sbjct: 299 SIISTCPEHDDHQ-GRAIHGLVIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSL 357
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ D +W++++ GY+Q + +A+ F M S+ + E FS L + +++ GR
Sbjct: 358 LIKDTVSWNSMLTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGR 417
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H II GF+S FV+++++ YSK +L+++ K+F+E D+ V WN++I G+
Sbjct: 418 QIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHG 477
Query: 359 HYGEAIELLKDMLFEGHCP-NLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVI 416
H L +M+ E P + T+ ++ S ++ G + + + G +
Sbjct: 478 HAHIVHSLFNEMV-ELKVPLDHVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEH 536
Query: 417 GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ VD+Y + G+L A+++ D + + + W T+L HG A E+ S + ++
Sbjct: 537 YACGVDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLGACRIHGNMELASEVASHLLVSE 596
Query: 476 IKPNDNTFIGVLSACVHIGLVEE-----------------GW---------HYFNSMIRD 509
K + +T+I + S +G+ + GW H FN+ R
Sbjct: 597 PKQH-STYILLSSMYSGLGMWSDRAIVQREMKNRGLSKVPGWSWIEVKNEVHSFNAEDRS 655
Query: 510 HGISPRMDHIASVVHLF 526
H PRMD I ++ L
Sbjct: 656 H---PRMDEIYEMLSLL 669
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 105/197 (53%), Gaps = 2/197 (1%)
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL-LEESLKTFDEMDEHDVVSWNALIA 352
TI + H+ ++K S T N +L YS L L + + FDE+ D SWN+L+
Sbjct: 6 TIAAAKSHATLLKSCIISPTRW-NQLLTAYSLSPLGLAAARRVFDEIPRPDAASWNSLLT 64
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
H+++ + A LL+ M +G N + + L ++ G Q K G
Sbjct: 65 AHVSAGAHPAAWCLLRAMHAQGVAANTFALGSSLRSAAAARCPALGAQLQSLAFKSGLAD 124
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
NV SAL+ MYAKCGR+ DAR+VFD + +N VSWN ++ GY + G +ALE++ M+
Sbjct: 125 NVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSWNALIAGYVESGKVLQALELFINME 184
Query: 473 ENKIKPNDNTFIGVLSA 489
++ P++ TF +L+A
Sbjct: 185 TERLVPDEATFAALLTA 201
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 132/261 (50%), Gaps = 13/261 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFS---RINDAQKLFDEMPERNVISWSALISGFSQIGMP 57
+I +G N L+ MY + S + DA K FD + ++ +SW+++++G+SQ +
Sbjct: 319 VIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLS 378
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
AL +FR M + + Y + A+ +C+ + G++IHG + SG N+ VS+ L
Sbjct: 379 ADALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSL 438
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH--VHGLKIFLLSRKSGVAI 175
I MY K G+L A+ F+ + + +S+ W S++ Y Q G VH L ++ K V +
Sbjct: 439 IFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELK--VPL 496
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+ ++ +C+ G + G +I + + + L + + A G ++LY + +L+ A
Sbjct: 497 DHVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHY-ACG-VDLYGRAGQLEKAK 554
Query: 233 RVFSNIQL-PDLTAWSALIGG 252
+ ++ PD W L+G
Sbjct: 555 ELIDSMPFEPDAMVWMTLLGA 575
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/532 (34%), Positives = 287/532 (53%), Gaps = 9/532 (1%)
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
N SW S+++ + G+ V L+ F RK G+ + S + +C+ L +L G H
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
F E D FV+ LI++Y+KC +L A +F I L ++ +W+++I GY Q +A
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098
Query: 261 EAIDLFVKMFS--------SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
A+ LF + + V VL A + V +H ++K GF
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 2158
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
V NT++D Y+KC S K FD M+E D +SWN++IA + S GEA+E+ M+
Sbjct: 2159 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVR 2218
Query: 373 E-GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
G N T S +L + A+ GK H ++K + NV +G++++DMY KCGR+
Sbjct: 2219 HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVE 2278
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
A+K FD + KN+ SW M+ GY HG +EAL+I+ M +KPN TF+ VL+AC
Sbjct: 2279 MAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS 2338
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
H GLVEEGWH+FN+M + I P ++H +V LF G AY IK ++P+ VVW
Sbjct: 2339 HAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVW 2398
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
LL C+ HK++ LG AA+K+ DP++ +++LSN+YA+A W + ++R +MK +
Sbjct: 2399 GSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNR 2458
Query: 612 SLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
L K G S EL+ ++H F +++ + +L++ L GYVP+
Sbjct: 2459 QLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPN 2510
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 196/380 (51%), Gaps = 31/380 (8%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
N K QIH+ + + L D+ + LI+LY+ ++ A +F IQ P W+ +I
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G + +A+ L+ M G+ + TF +V+ A + G+ +H +IK GFS
Sbjct: 99 ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSG 158
Query: 312 FTFVANTVLDFYSKCEL-------------------------------LEESLKTFDEMD 340
FV N ++DFY KC L+E+ + FDE+
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
+VVSW A+I G++ + EA+EL K M E PN YT +++ +++ + G+
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
H +K + V +G+AL+DMY+KCG + DA +VF+ + K+L +WN+M+ HGL
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
G+EAL ++S M+ +KP+ TFIGVL ACVHI V+EG YF M + +GI+P +H
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYE 398
Query: 521 SVVHLFACRGQTRRAYEFIK 540
+ L+A A++ K
Sbjct: 399 CMTELYARSNNLDEAFKSTK 418
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 222/459 (48%), Gaps = 21/459 (4%)
Query: 11 ITYNHLLLMYV--KFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
ITYN +L + N A + + + NV SW+++I+ ++ G AL F +
Sbjct: 1948 ITYNSILFGVPSGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLR 2007
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
L P ++ + +C++ D SG+ H + + G E + VS+ LI+MY KCG L
Sbjct: 2008 KLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLK 2067
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL--------LSRKSGVAISEFSC 180
A+ +FD RN +SW S+++ Y Q + + L +F + + V +
Sbjct: 2068 DARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVM 2127
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL AC+ + + +H V K + V L++ YAKC + ++ +VF ++
Sbjct: 2128 VSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEE 2187
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSS-GLMPSEVTFSYVLGAFADVKETIGGRQ 299
D +W+++I YAQ G + EA+++F M G+ + VT S VL A A G+
Sbjct: 2188 KDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKC 2247
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +IKM V +++D Y KC +E + KTFD M E +V SW A++AG+
Sbjct: 2248 IHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGR 2307
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNV 414
EA+++ M+ G PN T+ ++L S +E G H ++PG +
Sbjct: 2308 AKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHY- 2366
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTML 452
+VD++ + G LN+A + + K + V W ++L
Sbjct: 2367 ---GCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 2402
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 203/405 (50%), Gaps = 26/405 (6%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF ++ + L+ MY K ++ DA+ LFDE+P RNV+SW+++I+G+ Q + AL F
Sbjct: 2045 GFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLF 2104
Query: 65 RLMVCCVLE-------P-NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
+ + E P + V +SAC+ + +HG + + G + + V N
Sbjct: 2105 KDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNT 2164
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAI 175
L++ Y KCG ++ VFD E++ ISW S+++ Y Q G L++F + R GV
Sbjct: 2165 LMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRY 2224
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ + ++VL ACA G L+ G IH V K LE++ V +I++Y KC ++++A + F
Sbjct: 2225 NAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTF 2284
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
++ ++ +W+A++ GY G+A EA+D+F KM +G+ P+ +TF VL A +
Sbjct: 2285 DRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVE 2344
Query: 296 GG-----RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNA 349
G H I+ G + ++D + + L E+ M + D V W +
Sbjct: 2345 EGWHWFNAMKHKYDIEPGIEHY----GCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGS 2400
Query: 350 LIAGHLASCHYGEAI---ELLKDMLFEGHCPNLYTYSNILNISSD 391
L L +C + + E+ LFE N Y + N+ +D
Sbjct: 2401 L----LGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYAD 2441
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 153/280 (54%), Gaps = 9/280 (3%)
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
+LA+ + + ++ +W+++I A+ G + EA+ F + GL+P+ +F + +
Sbjct: 1966 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 2025
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ + + + GR H GF + FV++ ++D YSKC L+++ FDE+ +VVSW
Sbjct: 2026 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 2085
Query: 349 ALIAGHLASCHYGEAIELLKDMLFE-------GHCP-NLYTYSNILNISSDIPAIEWGKQ 400
++I G++ + A+ L KD L E + P + ++L+ S + +
Sbjct: 2086 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 2145
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
H +VK GFD ++ +G+ L+D YAKCG+ ++KVFD + K+ +SWN+M+ YAQ GL
Sbjct: 2146 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 2205
Query: 461 GREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
EALE++ M++ ++ N T VL AC H G + G
Sbjct: 2206 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAG 2245
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 160/371 (43%), Gaps = 32/371 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG + + L+ +Y RI A LF ++ +W+ +I + G+ E A
Sbjct: 50 IIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQA 109
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L ++ MVC + + +T+ + AC + GK +HG + + G + V N LI+
Sbjct: 110 LMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDF 169
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--------------- 165
Y KCG A VF+ RN +SW +++S CG+ +IF
Sbjct: 170 YFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMI 229
Query: 166 --------------LLSRKSGVAI--SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
L R I +E++ S++ AC +G L +G IH K +E
Sbjct: 230 NGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIE 289
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
++ LI++Y+KC + A VF + L W+++I G EA++LF +M
Sbjct: 290 IGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEM 349
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK-MGFSSFTFVANTVLDFYSKCEL 328
+ P +TF VL A +K G + + + G + + + Y++
Sbjct: 350 ERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNN 409
Query: 329 LEESLKTFDEM 339
L+E+ K+ E+
Sbjct: 410 LDEAFKSTKEV 420
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 131/255 (51%), Gaps = 3/255 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF ++ N L+ Y K + ++K+FD M E++ ISW+++I+ ++Q G+ A
Sbjct: 2150 VVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEA 2209
Query: 61 LNYFRLMVCCV-LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L F MV V + N T + ACA G R+GK IH ++ + LE N V +I+
Sbjct: 2210 LEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIID 2269
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG + A+ FD E+N SW ++++ Y G L IF ++GV + +
Sbjct: 2270 MYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYIT 2329
Query: 180 CASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
SVL AC+ G ++ G +++ K +E +++L+ + L+ A + +
Sbjct: 2330 FVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRM 2389
Query: 239 QL-PDLTAWSALIGG 252
++ PD W +L+G
Sbjct: 2390 KMKPDFVVWGSLLGA 2404
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 144/322 (44%), Gaps = 31/322 (9%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
++IH ++ RSGL + ++ LI++Y G ++ A +F + +W ++ +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G L ++ G+A +F+ V+ AC ++ +G +H + K D FV
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 216 MGLINLYAKC----------EKLDL---------------------ASRVFSNIQLPDLT 244
LI+ Y KC EK+ + A R+F I ++
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+A+I GY + + EA++LF +M + + P+E T ++ A ++ GR +H
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK ++ ++D YSKC ++++++ F+ M + +WN++I EA+
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343
Query: 365 ELLKDMLFEGHCPNLYTYSNIL 386
L +M P+ T+ +L
Sbjct: 344 NLFSEMERVNVKPDAITFIGVL 365
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
+D+ +V SWN++IA EA+ + G P ++ + S + + G
Sbjct: 1975 VDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSG 2034
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
+ +H GF++++ + SAL+DMY+KCG+L DAR +FD + +N+VSW +M+ GY Q+
Sbjct: 2035 RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQN 2094
Query: 459 GLGREALEIYS--MMQENKIKPNDN------TFIGVLSACVHIG--LVEEGWHYF 503
AL ++ + +E +++ +N + VLSAC + + EG H F
Sbjct: 2095 EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGF 2149
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 17/149 (11%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY K I DA ++F+ MP +++ +W+++I+ G+ + ALN F M ++P+
Sbjct: 298 LIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPD 357
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINMYGKCG--------- 125
T++G + AC + + G RM + G+ C+ +Y +
Sbjct: 358 AITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKST 417
Query: 126 -----LLSSAQFVFDASLERNSISWVSLL 149
L +S FDA ++ ++W LL
Sbjct: 418 KEVGSLANSPSICFDARAKQ--VAWTQLL 444
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 202/593 (34%), Positives = 317/593 (53%), Gaps = 19/593 (3%)
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSHVS---NCLINMYGKCGLLSSAQFVFDASL--ERN 141
A+ R G+E H ++GL L+ H N L++MY + GL++ AQ +F + +
Sbjct: 25 AAAAAVRLGREAHAFALKNGL-LHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGD 83
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS 201
++W +++S Q G ++ GV + AS L AC+ L L VG ++H+
Sbjct: 84 VVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHA 143
Query: 202 LVFKC-ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD----LTAWSALIGGYAQL 256
V K L + FVA L+++YA E++ A +VF + PD L W+A+I GYAQ
Sbjct: 144 YVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV--PDSGKQLGMWNAMICGYAQA 201
Query: 257 GKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G EA+ LF +M + +G +P E T + VL A A + G +H ++K G + FV
Sbjct: 202 GMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFV 261
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM--LFE 373
N ++D Y++ + + + F +D DVVSWN LI G + H +A +L ++M L E
Sbjct: 262 QNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEE 321
Query: 374 GHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
G PN T +L + + A GK+ H V+ D++V +GSALVDMYAKCG L
Sbjct: 322 GGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLAL 381
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS-MMQENKIKPNDNTFIGVLSACV 491
+R VFD L +N ++WN +++ Y HGLG EA ++ M + +PN+ TF+ L+AC
Sbjct: 382 SRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACS 441
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV-V 550
H G+V+ G F++M RDHG+ P D +A VV + G+ AY + S +V
Sbjct: 442 HSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSA 501
Query: 551 WRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKE 610
W +L C+ H+++ LG A E++L +PE+ S +++L N+Y+ A W A+VR M+
Sbjct: 502 WSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRR 561
Query: 611 KSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ + K+ GCSW E+ +H F A ++H M L + GY PD
Sbjct: 562 RGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPD 614
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 218/454 (48%), Gaps = 13/454 (2%)
Query: 12 TYNHLLLMYVKFSRINDAQKLF-DEMPER-NVISWSALISGFSQIGMPEVALNYFRLMVC 69
+N LL MY + + DAQ+LF P R +V++W+ ++S Q GM + A+ MV
Sbjct: 53 AFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVA 112
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNCLINMYGKCGLLS 128
+ P+ T+ A+ AC+ G+E+H + + L NS V++ L++MY +
Sbjct: 113 LGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVG 172
Query: 129 SAQFVFDASLE--RNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLG 185
A+ VFD + + W +++ Y Q G L++F + ++G E + ASVL
Sbjct: 173 KARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLP 232
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
ACA +H V K + ++FV L+++YA+ K D+A R+F+ + LPD+ +
Sbjct: 233 ACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS 292
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFS---SGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
W+ LI G G +A L +M G++P+ +T +L A + G+++H
Sbjct: 293 WNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG 352
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
++ + V + ++D Y+KC L S FD + + ++WN LI + GE
Sbjct: 353 YAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGE 412
Query: 363 AIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSAL 420
A L M G PN T+ L S ++ G Q H G + I + +
Sbjct: 413 ATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACV 472
Query: 421 VDMYAKCGRLNDARKVFDHLSS--KNLVSWNTML 452
VD+ + GRL++A + + + + + +W+TML
Sbjct: 473 VDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 506
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 170/357 (47%), Gaps = 18/357 (5%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPE--RNVISWSALISGFSQIGMPEVALNYF-R 65
N + L+ MY ++ A+++FD +P+ + + W+A+I G++Q GM E AL F R
Sbjct: 154 NSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFAR 213
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKE-IHGRMYRSGLELNSHVSNCLINMYGKC 124
+ P T + ACA R +A +GKE +HG + + G+ N V N L++MY +
Sbjct: 214 MEAEAGFVPCETTMASVLPACA-RSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARL 272
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR------KSGVAISEF 178
G A+ +F + +SW +L++ C H F L+R + GV +
Sbjct: 273 GKTDVARRIFAMVDLPDVVSWNTLITG---CVVQGHVADAFQLAREMQQLEEGGVVPNAI 329
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ ++L CA+L G +IH + AL+ D V L+++YAKC L L+ VF +
Sbjct: 330 TLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 389
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFADVKETIGG 297
+ W+ LI Y G EA LF +M +SG P+EVTF L A + G
Sbjct: 390 PRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRG 449
Query: 298 RQL-HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD--EHDVVSWNALI 351
QL H++ G + V+D + L+E+ M+ E V +W+ ++
Sbjct: 450 LQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 506
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 11/260 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G N N L+ MY + + + A+++F + +V+SW+ LI+G G A
Sbjct: 250 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 309
Query: 61 LNYFRLMVCCVLE-----PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
R M LE PN T + + CA GKEIHG R L+ + V +
Sbjct: 310 FQLAREMQ--QLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS 367
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA- 174
L++MY KCG L+ ++ VFD RN+I+W L+ +Y G +F SG A
Sbjct: 368 ALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEAR 427
Query: 175 ISEFSCASVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+E + + L AC+ G + G+Q+ H++ +E + ++++ + +LD A
Sbjct: 428 PNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYA 487
Query: 234 VFSNIQLPD--LTAWSALIG 251
+ ++++ + ++AWS ++G
Sbjct: 488 MVTSMEAGEQQVSAWSTMLG 507
>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
Length = 867
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 206/674 (30%), Positives = 346/674 (51%), Gaps = 45/674 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRIN-DAQKLFDEMPERNVISWSALISGFSQIGMPEV 59
+I SGF + N L+ MY K + DA +FD + ++V+SW+A+I+G ++ G+ +
Sbjct: 166 VIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKE 225
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDA---RSGKEIHGRMYR-SGLELNSHVSN 115
A + F LM+ ++PNY T + CAS + R G++IH + + L + V N
Sbjct: 226 AFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCN 285
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGV 173
L++ Y K G A+ +F A R+ +SW ++++ Y GE + L +F L+S + +
Sbjct: 286 ALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEM-L 344
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF-DKFVAMGLINLYAKCEKLDLAS 232
+ + S+L ACA L NL+ G Q+H+ + + F D L++ YAKC ++ A
Sbjct: 345 LLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAY 404
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
FS I DL +W++++ + + + L M + P VT ++ A +
Sbjct: 405 HTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLL 464
Query: 293 ETIGGRQLHSLIIKMG---FSSFTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSWN 348
+++H I+ G ++ V N +LD YSKC +E + K F + E ++V+ N
Sbjct: 465 RVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCN 524
Query: 349 ALIAGHLA-SCHYG------------------------------EAIELLKDMLFEGHCP 377
+LI+G++ HY +A+EL + +G P
Sbjct: 525 SLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKP 584
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
++ T +++ + + + ++ +Q H I++ F+ ++ + L+D YAKCG + A K+F
Sbjct: 585 DVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE-DLHLKGTLLDAYAKCGIIGYAYKIF 643
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
K+LV + M+ GYA HG+ +ALE +S M IKP+ F +LSAC H G +
Sbjct: 644 QSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIA 703
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
EG F+S+ + HG+ P ++ A VV L A G AY F+ PIE N +W LL
Sbjct: 704 EGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEANANIWGTLLGA 763
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
CKT+ ++ LGR A+K+ + D +I+LSN+YA + WD +VRK+M+ K LKK
Sbjct: 764 CKTYHEVELGRIVADKLFKIEANDIGNYIVLSNLYAADDRWDGVMEVRKMMRNKDLKKPA 823
Query: 618 GCSWTELQNKMHYF 631
GCSW E++ + F
Sbjct: 824 GCSWIEVERTNNIF 837
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/595 (25%), Positives = 283/595 (47%), Gaps = 47/595 (7%)
Query: 11 ITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV-ALNYFRLM-V 68
+T LL MY K ++D KLFD+ + + W+ ++SG+S+ G + + FR M
Sbjct: 73 VTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHS 132
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ P+ T + CA G+ GK +HG + +SG E+++ N L++MY KCGL++
Sbjct: 133 SGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVA 192
Query: 129 -SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A VFD+ + ++ +SW ++++ + G +F L K V + + A++L C
Sbjct: 193 CDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVC 252
Query: 188 AVLG-NL--KVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
A N+ + G QIHS V + L D V L++ Y K + A +F + DL
Sbjct: 253 ASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDL 312
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+W+ +I GYA G+ +++ +F + S L+ VT +L A A + G+Q+H+
Sbjct: 313 VSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHA 372
Query: 303 LIIKMGFS-SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
I++ F T N ++ FY+KC +EE+ TF + D++SWN+++ H+
Sbjct: 373 YILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHS 432
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG---FDSNVVIGS 418
+ LL ML P+ T I++ + + ++ K+ H ++ G + +G+
Sbjct: 433 RFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGN 492
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSK--------------------------------NLV 446
A++D Y+KCG + A K+F +LS K +L
Sbjct: 493 AILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLT 552
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
+WN M+ YA++ +ALE++ +Q +KP+ T + ++ C + V +
Sbjct: 553 TWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYI 612
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
IR + +++ +A G AY+ +SS ++ + V++ ++ G H
Sbjct: 613 IRSSFEDLHLK--GTLLDAYAKCGIIGYAYKIFQSS-VDKDLVMFTAMIGGYAMH 664
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 161/594 (27%), Positives = 285/594 (47%), Gaps = 26/594 (4%)
Query: 42 ISWSALISGFSQIGMPEVALNYFR--LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIH 99
++W++ I AL++F L +P++ + +C++ + GK +H
Sbjct: 1 MTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLH 60
Query: 100 GRMYRSGLELNSHV-SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH 158
+ + G ++ HV S L+NMY KCG+L +FD + + W +LS Y + G++
Sbjct: 61 SYVVKQG-HVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKN 119
Query: 159 -VHGLKIFLLSRKSG-VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM 216
+K+F SG V S + A+VL CA GNL G +H V K E D F
Sbjct: 120 DADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGN 179
Query: 217 GLINLYAKCEKLDL-ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L+++YAKC + A VF +I D+ +W+A+I G A+ G EA LF M +
Sbjct: 180 ALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVK 239
Query: 276 PSEVTFSYVLGAFADVKETIG---GRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEE 331
P+ T + +L A E I GRQ+HS +++ S+ V N +L FY K +E
Sbjct: 240 PNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKE 299
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML-FEGHCPNLYTYSNILNISS 390
+ F MD D+VSWN +IAG+ + + +++ + +++ E + T +IL +
Sbjct: 300 AESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACA 359
Query: 391 DIPAIEWGKQTHCCIVK-PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
+ ++ GKQ H I++ P + G+ALV YAKCG + +A F +S K+L+SWN
Sbjct: 360 QLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWN 419
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
++L + + L + +M + I+P+ T + ++ C + V++ IR
Sbjct: 420 SILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRS 479
Query: 510 HGI----SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
+ +P + + +++ ++ G A + ++ + N V L+SG +
Sbjct: 480 GSLLCATAPTVGN--AILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGY-----VG 532
Query: 566 LG-RYAAEKILSTDPE-DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
LG Y A I S E D + ++ VYAE + ++ ++ ++ + +K D
Sbjct: 533 LGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDV 586
>gi|302789718|ref|XP_002976627.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
gi|300155665|gb|EFJ22296.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
Length = 734
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 200/605 (33%), Positives = 314/605 (51%), Gaps = 19/605 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ G+ + + +L MY K ++ DA+K+FD + ++V+SW+A+I+ FSQ+G P VA
Sbjct: 130 MVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGRPRVA 189
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M ++PN T+V ++AC G +++ R G + V + + M
Sbjct: 190 LELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTM 249
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G L A+ FD E+++ SW +++ +Y Q G L ++ G F+
Sbjct: 250 YSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEPDTFTH 309
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+LGAC+ LG L+ G +IH+ + + D ++ +YAKC ++ A F+ +
Sbjct: 310 VCLLGACSSLGALEEGERIHA---RMGDKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMSS 366
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+ALI GY Q EA+DL+ M GL TFS VLGA + K+ GR +
Sbjct: 367 SNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAKDLSEGRAV 426
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ I+ G + N +++ ++KC L +L+ F M + VSWN+++
Sbjct: 427 HARIVSRGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQHGDG 486
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSD--IPAIEWGKQTHCCIVKPGFDSNVVIGS 418
G A EL K+ML EG P+ T+++ILN S +++ GK H I G DS+ + +
Sbjct: 487 GGAFELFKEMLLEGGEPHEQTFTSILNFCSHSACSSLDQGKALHQRITASGVDSDPTVAT 546
Query: 419 ALVDMY-----AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
L+ MY AKCG L+DAR VFD + KN++SW M+VGYAQH G ALE++ M+
Sbjct: 547 CLLTMYLLNALAKCGALDDARAVFDGIRGKNVLSWTAMIVGYAQHARGDGALELFREMEL 606
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+ I+ ++ TF +L AC H GLV G YF SM+ DH I+P +H V+ + A G+
Sbjct: 607 DGIQADEITFTSILHACSHRGLVRVGREYFRSMVEDHAIAPSAEHYNVVMDMLARAGRVG 666
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL------STDPEDTSAHIM 587
A E K P V L+S + H V A K L S + + S++I
Sbjct: 667 EAEEVAKVFP-AIKHVALMTLVSSSQVHG--VDSSVVARKRLLLQGDGSCEKDTASSYIA 723
Query: 588 LSNVY 592
LSN +
Sbjct: 724 LSNSF 728
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/491 (29%), Positives = 264/491 (53%), Gaps = 7/491 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG--MPEVAL 61
SG + N+L+ MY + A+++FD++ +RNV SW+ ++S ++Q G M + L
Sbjct: 32 SGVDKDTYLGNNLIQMYGNCGCVGKAREIFDKLIDRNVYSWTIMLSAYAQNGHYMEALVL 91
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+Y M + PN T++ + AC++ GD +G++IH RM G + ++ VS ++ MY
Sbjct: 92 SY--QMDLEGIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMY 149
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC L A+ +FD+ ++ +SW ++++++ Q G L++F GV +E +
Sbjct: 150 SKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFV 209
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
++L AC + L+ G +++ C D FV + +Y++ L A F +++
Sbjct: 210 NILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREK 269
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+W+A++ Y Q G +A+ L+ +M G P T +LGA + + G ++H
Sbjct: 270 STGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIH 329
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ +MG + ++ Y+KC +E ++ F +M +VV WNALIAG++ H+
Sbjct: 330 A---RMGDKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQ 386
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA++L M EG ++YT+S++L S + G+ H IV G + V + + LV
Sbjct: 387 EALDLYHAMNLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSRGLEVVVPLQNGLV 446
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
+M+AKCG L A ++F ++S+N VSWN+M+ + QHG G A E++ M +P++
Sbjct: 447 NMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQHGDGGGAFELFKEMLLEGGEPHEQ 506
Query: 482 TFIGVLSACVH 492
TF +L+ C H
Sbjct: 507 TFTSILNFCSH 517
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/469 (30%), Positives = 250/469 (53%), Gaps = 5/469 (1%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
G EIH ++ SG++ ++++ N LI MYG CG + A+ +FD ++RN SW +LS+Y Q
Sbjct: 22 GMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIFDKLIDRNVYSWTIMLSAYAQ 81
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
G ++ L + G+ + + +LGAC+ LG+++ G +IH+ + + D V
Sbjct: 82 NGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVV 141
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
+ ++ +Y+KCEKL A ++F +++ D+ +W+A+I ++QLG+ A++LF +M G+
Sbjct: 142 STAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGV 201
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
P+E TF +L A + G +L+ I G+ + FV +T + YS+ L E+
Sbjct: 202 KPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKA 261
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
FD + E SWNA++ ++ H +A+ L K+M G P+ +T+ +L S + A
Sbjct: 262 AFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEPDTFTHVCLLGACSSLGA 321
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
+E G++ H + G + + GSA+V MYAKCG + A F +SS N+V WN ++ G
Sbjct: 322 LEEGERIH---ARMGDKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAG 378
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
Y Q +EAL++Y M ++ + TF VL AC + EG ++ I G+
Sbjct: 379 YVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAKDLSEG-RAVHARIVSRGLEV 437
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+ +V++FA G A E + N V W +++ H D
Sbjct: 438 VVPLQNGLVNMFAKCGSLTLALEMFRGMA-SRNTVSWNSMVTAFCQHGD 485
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 199/671 (29%), Positives = 342/671 (50%), Gaps = 4/671 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDE--MPERNVISWSALISGFSQIGMPEV 59
+ GF V N L+ MY K + A+ LFD M + + +SW+++IS G
Sbjct: 172 VKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLE 231
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL+ FR M + N YT+V A+ + G IHG +S + +V+N LI
Sbjct: 232 ALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIA 291
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG + A+ VF + L R+ +SW +LLS Q + L F + S + S
Sbjct: 292 MYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVS 351
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+++ A GNL G ++H+ + L+ + + LI++YAKC + F +
Sbjct: 352 VLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMH 411
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
DL +W+ +I GYAQ EAI+LF K+ G+ + VL A + +K R+
Sbjct: 412 EKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIRE 471
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H + K + + N +++ Y + + + + F+ + D+VSW ++I + +
Sbjct: 472 IHGYVFKRDLADI-MLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGL 530
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EA+EL + P+ + L+ ++++ +++ GK+ H +++ GF I S+
Sbjct: 531 PVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASS 590
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
LVDMYA CG + ++RK+F + ++L+ W +M+ HG G EA+ ++ M + + P+
Sbjct: 591 LVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPD 650
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TF+ +L AC H GL+ EG +F M + + P +H A +V L + AY+F+
Sbjct: 651 HITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFV 710
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
+S PI+P+ VW LL C H + LG AA+++L +D +++ + ++SN++A W+
Sbjct: 711 RSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWN 770
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL-FDG 658
+ +VR MK LKK+ GCSW E+ NK+H F + Q D++ + Q + L G
Sbjct: 771 DVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKG 830
Query: 659 GYVPDPIYSSH 669
GY+ + H
Sbjct: 831 GYIAQTKFVFH 841
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 157/561 (27%), Positives = 293/561 (52%), Gaps = 13/561 (2%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H + LL MY K + DA K+FDEM ER + +W+A++ F G A+ ++
Sbjct: 76 HLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKE 135
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M + + T+ + AC + G++R G EIHG + G V N LI MYGKCG
Sbjct: 136 MRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGD 195
Query: 127 LSSAQFVFDASL--ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
L A+ +FD + + +++SW S++S++ G+ + L +F ++ GVA + ++ + L
Sbjct: 196 LGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAAL 255
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+K+GM IH K D +VA LI +YAKC +++ A RVF+++ D
Sbjct: 256 QGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYV 315
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ L+ G Q +A++ F M +S P +V+ ++ A + G+++H+
Sbjct: 316 SWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYA 375
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS-CHYGEA 363
I+ G S + NT++D Y+KC ++ F+ M E D++SW +IAG+ + CH EA
Sbjct: 376 IRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHL-EA 434
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
I L + + +G + ++L S + + + ++ H + K +++++ +A+V++
Sbjct: 435 INLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNV 493
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
Y + G + AR+ F+ + SK++VSW +M+ +GL EALE++ +++ I+P+
Sbjct: 494 YGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAI 553
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG---QTRRAYEFIK 540
I LSA ++ +++G +IR G +S+V ++AC G +R+ + +K
Sbjct: 554 ISALSATANLSSLKKGKEIHGFLIRK-GFFLEGPIASSLVDMYACCGTVENSRKMFHSVK 612
Query: 541 SSPIEPNKVVWRCLLSGCKTH 561
+ ++W +++ H
Sbjct: 613 QRDL----ILWTSMINANGMH 629
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/483 (29%), Positives = 234/483 (48%), Gaps = 23/483 (4%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
C + G+++H R+ +S L++ ++ L++MY KCG L A VFD ER +W
Sbjct: 56 CVAVKALPQGQQLHARLLKS--HLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTW 113
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+++ ++ G+++ ++++ R GVAI + SVL AC LG ++G +IH + K
Sbjct: 114 NAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVK 173
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL--PDLTAWSALIGGYAQLGKACEAI 263
C FV LI +Y KC L A +F I + D +W+++I + GK EA+
Sbjct: 174 CGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEAL 233
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
LF +M G+ + TF L D G +H +K + +VAN ++ Y
Sbjct: 234 SLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMY 293
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+KC +E++ + F M D VSWN L++G + + Y +A+ +DM P+ +
Sbjct: 294 AKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVL 353
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
N++ S + GK+ H ++ G DSN+ IG+ L+DMYAKC + F+ + K
Sbjct: 354 NLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEK 413
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
+L+SW T++ GYAQ+ EA+ ++ +Q + + VL AC G
Sbjct: 414 DLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRAC-------SGLKSR 466
Query: 504 NSMIRDHGISPRMD--------HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
N + HG + D I +V R RRA+E I+S I V W ++
Sbjct: 467 NFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDI----VSWTSMI 522
Query: 556 SGC 558
+ C
Sbjct: 523 TCC 525
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 144/288 (50%), Gaps = 18/288 (6%)
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
E S +L VK G+QLH+ ++K S+F +A +L Y KC L++++K FD
Sbjct: 46 EHAHSLLLDLCVAVKALPQGQQLHARLLKSHLSAF--LATKLLHMYEKCGSLKDAVKVFD 103
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
EM E + +WNA++ ++S Y EAIEL K+M G + T+ ++L +
Sbjct: 104 EMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRL 163
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD--HLSSKNLVSWNTMLVGY 455
G + H VK GF V + +AL+ MY KCG L AR +FD + ++ VSWN+++ +
Sbjct: 164 GAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAH 223
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
G EAL ++ MQE + N TF+ L V+ G + HG + +
Sbjct: 224 VTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG-------MGIHGAALK 276
Query: 516 MDHIASV------VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+H A V + ++A G+ A E + +S + + V W LLSG
Sbjct: 277 SNHFADVYVANALIAMYAKCGRMEDA-ERVFASMLCRDYVSWNTLLSG 323
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF + L+ MY + +++K+F + +R++I W+++I+ G A
Sbjct: 576 LIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEA 635
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRM-YRSGLELNSHVSNCLIN 119
+ F+ M + P++ T++ + AC+ G GK M Y LE C+++
Sbjct: 636 IALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVD 695
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGLK 163
+ + L A QFV ++ +S W +LL + C H+H K
Sbjct: 696 LLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGA-C----HIHSNK 735
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 207/709 (29%), Positives = 360/709 (50%), Gaps = 77/709 (10%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H N++TYN ++ + K +RI DA++LFD+M RN++SW+ +I+G+ M E A F +
Sbjct: 45 HKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDV 104
Query: 67 M-----VCCVLEPNYYTYVGAV---------------SAC--------ASRGDARSGKEI 98
M L YT G + +AC A +G K++
Sbjct: 105 MPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKV 164
Query: 99 ---------------------HGRM------YRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
+G+M + S E N N ++ Y K G LSSA
Sbjct: 165 FEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAW 224
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
+F+ N++SWV++L + G+ ++F +V+ A++
Sbjct: 225 QLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELF----------DRMPSKNVVSWNAMIA 274
Query: 192 NLKVGMQIHSLV--FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
+Q+ V FK D +IN Y + KLD A +V++ + D+TA +AL
Sbjct: 275 TYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTAL 334
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
+ G Q G+ EA +F ++ + + V ++ ++ ++ GR +L +
Sbjct: 335 MSGLIQNGRIDEADQMFSRIGAHDV----VCWNSMIAGYSR-----SGRMDEALNLFRQM 385
Query: 310 SSFTFVA-NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
V+ NT++ Y++ ++ + + F M E ++VSWN+LIAG L + Y +A++ L
Sbjct: 386 PIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLV 445
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG 428
M EG P+ T++ L+ +++ A++ G Q H I+K G+ +++ +G+AL+ MYAKCG
Sbjct: 446 MMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCG 505
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
R+ A +VF + +L+SWN+++ GYA +G +A + + M ++ P++ TFIG+LS
Sbjct: 506 RVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLS 565
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
AC H GL +G F MI D I P +H + +V L G+ A+ ++ ++ N
Sbjct: 566 ACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANA 625
Query: 549 VVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
+W LL C+ HK+L LGR+AAE++ +P + S +I LSN++AEA W+E +VR +M
Sbjct: 626 GLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRMLM 685
Query: 609 KEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
+ K K GCSW E+QN++ +F + A+ + ++ ++N L+ H+ D
Sbjct: 686 RGKRAGKQPGCSWIEVQNQIQHFLSHDPAKLRPKNIQIILNTLAAHMRD 734
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 81/153 (52%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG+ ++ N L+ MY K R+ A+++F ++ ++ISW++LISG++ G A
Sbjct: 482 ILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKA 541
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
F M + P+ T++G +SAC+ G A G +I M +E + +CL++
Sbjct: 542 FKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVD 601
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+ G+ G L A V ++ N+ W SLL +
Sbjct: 602 LLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGA 634
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
K G++ +A ++F +++ KNLV++N+M+ A++ R+A +++ M + +
Sbjct: 28 GKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIA 87
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI--ASVVHLFACRGQTRRAYEFIKSS 542
G L H +VEE F+ M P D+ A ++ + +G+ +A E ++
Sbjct: 88 GYL----HNNMVEEASELFDVM-------PERDNFSWALMITCYTRKGKLEKARELLELV 136
Query: 543 PIEPNKVVWRCLLSG 557
P + + W +++G
Sbjct: 137 PDKLDTACWNAMIAG 151
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 191/638 (29%), Positives = 313/638 (49%), Gaps = 94/638 (14%)
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS--------------------- 151
VSNC+I+ Y + G L A+ +FD ERN +SW +L+S
Sbjct: 89 VSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQN 148
Query: 152 ----------YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS 201
+ + G + LK+F +SGV ++ + SV+ AC LG+ +GM I
Sbjct: 149 VVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILG 208
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW--------------- 246
LV K E V+ LI L + ++DLA RVF ++ D+ +W
Sbjct: 209 LVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLRE 268
Query: 247 ----------------SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
SA+I Y+Q G A EA+ LF KM G P+ F+ L A A
Sbjct: 269 ARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALAS 328
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
++ G +H + K+G F+ ++++D Y KC ++ FD + E +VV WN++
Sbjct: 329 LRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSM 388
Query: 351 -------------------------------IAGHLASCHYGEAIELLKDMLFEGHCPNL 379
JAG+L + + +E+ +L G PN
Sbjct: 389 VGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNK 448
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
T+S++L + I +++ G H I+K G ++ +G+AL DMYAKCG + +++VF+
Sbjct: 449 STFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFER 508
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE-NKIKPNDNTFIGVLSACVHIGLVEE 498
+ KN +SW M+ G A+ G E+L ++ M+ +++ PN+ + VL AC H GLV++
Sbjct: 509 MPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDK 568
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
G YFNSM + +GI P+ H VV L + G+ A EFI++ P +P W LLSGC
Sbjct: 569 GLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGC 628
Query: 559 KTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTG 618
K +KD + A+K+ +++ +++LSN+YA A W + + +RK+M+EK LKK G
Sbjct: 629 KKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGG 688
Query: 619 CSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
CSW E++N++H F + + Q +++ + L +
Sbjct: 689 CSWVEVRNQVHSFYSEDGSHSQSDEIYGTLQLLRSEML 726
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 215/503 (42%), Gaps = 126/503 (25%)
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK----------L 228
+C S+L + G + G +H+ + K +++A+ L+ LY C K
Sbjct: 23 TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82
Query: 229 DLASRVFSN------IQLPDL---------------TAWSALIGGYAQLGKA-------- 259
D + V SN +Q +L +WSALI G + G+
Sbjct: 83 DGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFE 142
Query: 260 -----------------------CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
EA+ LF ++ SG+ P++VTF+ V+ A ++ +
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 297 GRQLHSLIIKMGFSSFTFVANT-------------------------------VLDFYSK 325
G + L++K GF + V+N+ +LD Y +
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
L E+ + FDEM E + +SW+A+IA + S + EA++L M+ EG PN+ ++
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L+ + + A+ G H + K G D +V IGS+L+D+Y KCG+ +D R VFD + KN+
Sbjct: 323 LSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNV 382
Query: 446 VSWNTMLVGYAQHGLG-------------------------------REALEIYSMMQEN 474
V WN+M+ GY+ +G + LE+++ + +
Sbjct: 383 VCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVS 442
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
PN +TF VL AC I +++G + +I+ GI + ++ ++A G
Sbjct: 443 GQTPNKSTFSSVLCACASIASLDKGMNVHGKIIK-LGIQYDIFVGTALTDMYAKCGDIGS 501
Query: 535 AYEFIKSSPIEPNKVVWRCLLSG 557
+ + + P E N++ W ++ G
Sbjct: 502 SKQVFERMP-EKNEISWTVMIQG 523
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 163/350 (46%), Gaps = 63/350 (18%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNV------------------- 41
++ +GF + N L+ + ++ I+ A+++FD M +R+V
Sbjct: 210 VVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREA 269
Query: 42 ------------ISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASR 89
ISWSA+I+ +SQ G E AL F MV +PN + +SA AS
Sbjct: 270 RRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASL 329
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSI------ 143
+G IHG + + G++ + + + LI++Y KCG + VFD LE+N +
Sbjct: 330 RALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMV 389
Query: 144 -------------------------SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
SW ++J+ Y + + L++F SG ++
Sbjct: 390 GGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKS 449
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +SVL ACA + +L GM +H + K +++D FV L ++YAKC + + +VF +
Sbjct: 450 TFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERM 509
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGA 287
+ +W+ +I G A+ G A E++ LF +M +S + P+E+ VL A
Sbjct: 510 PEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFA 559
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G ++ L MY K I ++++F+ MPE+N ISW+ +I G ++ G +
Sbjct: 474 IIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVES 533
Query: 61 LNYFRLM-VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLI 118
L F M + PN + + AC+ G G M + G++ C++
Sbjct: 534 LILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVV 593
Query: 119 NMYGKCGLLSSA-QFVFDASLERNSISWVSLLS 150
++ + G L A +F+ + + +W +LLS
Sbjct: 594 DLLSRSGRLYEAEEFIRTIPFQPEANAWAALLS 626
>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 205/692 (29%), Positives = 355/692 (51%), Gaps = 47/692 (6%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ Y+K + DA K+F + NV+S++ALISGFS+ + A+ F M+ +E
Sbjct: 134 NALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIE 193
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN YT+V ++AC D + G ++HG + + GL + N L+ +Y KCG L +
Sbjct: 194 PNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRL 253
Query: 134 FDASLERNSISWVSLLSS------YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
F+ ER+ SW +++SS Y + ++ G+++ G+ + FS +++L AC
Sbjct: 254 FEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLC-----KGLKVDHFSLSTLLTAC 308
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
A G Q+H+L K LE V+ LI Y KC + + +F + + D+ W+
Sbjct: 309 AGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWT 368
Query: 248 ALIGGYAQLG--------------KAC-----------------EAIDLFVKMFSSGLMP 276
+I Y + G + C A++LF++M G+
Sbjct: 369 GMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEI 428
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
S+ T + ++ A +K +Q+ ++K G S + + ++D Y++C +E++ K F
Sbjct: 429 SDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIF 488
Query: 337 DEMD-EHDVVSW-NALIAGHLASCHYGEAIELLKDMLFEGH-CPNLYTYSNILNISSDIP 393
+ E+D + ++I G+ + EAI L EG + ++IL++ I
Sbjct: 489 YQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIG 548
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
E G Q HC +K G + +G+A V MY+KC ++DA +VF+ ++ +++VSWN ++
Sbjct: 549 FHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVA 608
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH--IGLVEEGWHYFNSMIRDHG 511
G+ H G +AL I+ M++ IKP+ TF ++SA H + LV+ F SM +H
Sbjct: 609 GHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHN 668
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA 571
I P ++H AS + + G A + I++ P+EP+ VWR LL+ C+ +K+ L + AA
Sbjct: 669 IKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAA 728
Query: 572 EKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
IL+ +P+D ++I+ SN+Y+ + W + KVR+ M+EK +K SW +NK+H F
Sbjct: 729 RNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSF 788
Query: 632 STSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ QG D++ + L + GYVPD
Sbjct: 789 YARDRSHPQGKDIYSGLEILILECLKVGYVPD 820
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 219/445 (49%), Gaps = 37/445 (8%)
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
GD + +H + + LE + + N LI+ Y K GL+ A VF N +S+ +L+
Sbjct: 111 GDPDLARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALI 168
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
S + + +++F SG+ +E++ ++L AC + ++G Q+H +V K L
Sbjct: 169 SGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLL 228
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
F+ L+ LY KC LDL R+F + D+T+W+ +I + K EA D F M
Sbjct: 229 SCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGM 288
Query: 270 -FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC-- 326
GL + S +L A A + + G+QLH+L +K+G S V+++++ FY+KC
Sbjct: 289 QLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGS 348
Query: 327 -----------------------------ELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+L+ +++ F++M + + +S+NA++AG +
Sbjct: 349 ANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRN 408
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
A+EL +ML EG + T ++I+ + + + +Q ++K G SN I
Sbjct: 409 DDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIE 468
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKN--LVSWNTMLVGYAQHGLGREALEIY-SMMQEN 474
+ALVDMY +CGR+ DA K+F S +N +M+ GYA++G EA+ ++ S E
Sbjct: 469 TALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEG 528
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEG 499
I ++ +LS C IG E G
Sbjct: 529 AIVMDEVMSTSILSLCGSIGFHEMG 553
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 210/413 (50%), Gaps = 35/413 (8%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM-V 68
V N L+ +Y K ++ +LF+EMPER++ SW+ +IS + + A +YFR M +
Sbjct: 231 VFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQL 290
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC---- 124
C L+ ++++ ++ACA G+++H + GLE + VS+ LI Y KC
Sbjct: 291 CKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSAN 350
Query: 125 ---------------------------GLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
G+L SA VF+ +RN IS+ ++L+ + +
Sbjct: 351 DVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDD 410
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
L++F+ + GV IS+ + S++ AC +L + KV QI V K + + +
Sbjct: 411 GSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETA 470
Query: 218 LINLYAKCEKLDLASRVFSNIQLP-DLTAW-SALIGGYAQLGKACEAIDLFVKMFSSG-L 274
L+++Y +C +++ A ++F L D TA +++I GYA+ GK EAI LF S G +
Sbjct: 471 LVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAI 530
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+ EV + +L + G Q+H +K G + T V N + YSKC ++++++
Sbjct: 531 VMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVR 590
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
F+ M+ D+VSWN L+AGH+ +A+ + K M G P+ T++ I++
Sbjct: 591 VFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIIS 643
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 183/358 (51%), Gaps = 23/358 (6%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+VIT+ ++ Y++F ++ A ++F++MP+RN IS++A+++G S+ AL F M+
Sbjct: 363 DVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEML 422
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+E + T ++AC + ++I G + + G+ NS + L++MY +CG +
Sbjct: 423 EEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRME 482
Query: 129 SAQFVF-DASLERNSISWV-SLLSSYCQCGEHVHGLKIFLLSRKSG-VAISEFSCASVLG 185
A+ +F SLE + + + S++ Y + G+ + +F + G + + E S+L
Sbjct: 483 DAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILS 542
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
C +G ++GMQ+H K L + V +++Y+KC +D A RVF+ + + D+ +
Sbjct: 543 LCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVS 602
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ L+ G+ + +A+ ++ KM +G+ P +TF+ ++ A+ + + SL +
Sbjct: 603 WNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVD-SCRSLFV 661
Query: 306 KMG-----------FSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALI 351
M ++SF V + LLEE+ +T M E DV W AL+
Sbjct: 662 SMETEHNIKPTLEHYASFISV-------LGRWGLLEEAEQTIRNMPLEPDVYVWRALL 712
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 125/261 (47%), Gaps = 5/261 (1%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
R +H+ +K+ F+ N ++ Y K L+ ++ K F + +VVS+ ALI+G
Sbjct: 116 ARAVHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
S EA+EL ML G PN YT+ IL + G Q H +VK G S V I
Sbjct: 174 SDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFI 233
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK- 475
+AL+ +Y KCG L+ ++F+ + +++ SWNT++ + EA + + MQ K
Sbjct: 234 CNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKG 293
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+K + + +L+AC +G +++ G+ + +S++ + G
Sbjct: 294 LKVDHFSLSTLLTACAGSVKPMKG-QQLHALALKVGLESHLSVSSSLIGFYTKCGSANDV 352
Query: 536 YEFIKSSPIEPNKVVWRCLLS 556
+ ++ PI + + W +++
Sbjct: 353 TDLFETMPIR-DVITWTGMIT 372
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 196/640 (30%), Positives = 326/640 (50%), Gaps = 18/640 (2%)
Query: 3 TSGFHPNVIT----YNHLL----LMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQI 54
T H +VIT H+L + Y I A+KLF+EMP+ +++S++ +I + +
Sbjct: 34 TKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVRE 93
Query: 55 GMPEVALNYFRLMVC----CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELN 110
G+ A++ F MV CV P+ YTY A + G +HGR+ RS +
Sbjct: 94 GLYHDAISVFIRMVSEGVKCV--PDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRD 151
Query: 111 SHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK 170
+V N L+ MY G + A+ VFD R+ ISW +++S Y + G L +F
Sbjct: 152 KYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN 211
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDL 230
V + + S+L C L +L++G +H LV + L V L+N+Y KC ++D
Sbjct: 212 ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDE 271
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
A VF ++ D+ W+ +I GY + G A++L M G+ P+ VT + ++ D
Sbjct: 272 ARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGD 331
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ G+ LH ++ S + +++ Y+KC+ ++ + F ++ W+A+
Sbjct: 332 ALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAI 391
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
IAG + + +A+ L K M E PN+ T +++L + + + HC + K GF
Sbjct: 392 IAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGF 451
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLS----SKNLVSWNTMLVGYAQHGLGREALE 466
S++ + LV +Y+KCG L A K+F+ + SK++V W ++ GY HG G AL+
Sbjct: 452 MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQ 511
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
++ M + + PN+ TF L+AC H GLVEEG F M+ + R +H +V L
Sbjct: 512 VFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLL 571
Query: 527 ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI 586
G+ AY I + P EP VW LL+ C TH+++ LG AA K+ +PE+T ++
Sbjct: 572 GRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYV 631
Query: 587 MLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
+L+N+YA W + KVR +M+ L+K G S E+++
Sbjct: 632 LLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 218/440 (49%), Gaps = 9/440 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S F + N LL MY+ F ++ A+ +FD M R+VISW+ +ISG+ + G A
Sbjct: 143 ILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDA 202
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F MV ++ ++ T V + C D G+ +H + L V N L+NM
Sbjct: 203 LMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNM 262
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A+FVFD R+ I+W +++ Y + G+ + L++ L + GV + +
Sbjct: 263 YLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTI 322
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS++ C + G +H + + D + LI++YAKC+++DL RVFS
Sbjct: 323 ASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASK 382
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
WSA+I G Q +A+ LF +M + P+ T + +L A+A + + +
Sbjct: 383 YHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNI 442
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE----HDVVSWNALIAGHLA 356
H + K GF S A ++ YSKC LE + K F+ + E DVV W ALI+G+
Sbjct: 443 HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGM 502
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV---KPGFDSN 413
A+++ +M+ G PN T+++ LN S +E G ++ K SN
Sbjct: 503 HGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSN 562
Query: 414 VVIGSALVDMYAKCGRLNDA 433
+ +VD+ + GRL++A
Sbjct: 563 HY--TCIVDLLGRAGRLDEA 580
>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 194/647 (29%), Positives = 346/647 (53%), Gaps = 11/647 (1%)
Query: 22 KFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVG 81
+ SR+ K+F M +R+VI+W+ ++S + + A+ FRLM+ ++P+ ++V
Sbjct: 48 RLSRL--LHKVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVN 105
Query: 82 AVSACASRGDARSGKEIHGRMYRSGLELNSH--VSNCLINMYGKCGLLSSAQFVFDASLE 139
A +S GD ++ ++G + + G E + V + I+MY + G L + VFD+ LE
Sbjct: 106 VFPAISSVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLE 165
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI-SEFSCASVLGACAVLGNLKVGMQ 198
+++ W +++ + Q + G+ +FL + K+ I + + S L A + L L +G Q
Sbjct: 166 KSAEVWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQ 225
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H+ K V ++ +Y++C + + VF + D+ +W+ +I G+ Q G
Sbjct: 226 MHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGL 285
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
E + L +M G + VT + +L A ++++ G+Q H+ +I+ G F + +
Sbjct: 286 DEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIK-FDGMDSY 344
Query: 319 VLDFYSKCELLEESLKTFDE--MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
++D Y+K L+ S + F+ + D +WNA+IAG+ + +A + ML +
Sbjct: 345 LIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLR 404
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
PN T ++IL S + +I GKQ H ++ D N+ + +ALVDMY+K G +N A V
Sbjct: 405 PNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESV 464
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
F S +N V++ TM++GY QHG+G AL ++ M+++ I+P+ TF+ VLSAC + GLV
Sbjct: 465 FTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLV 524
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV-VWRCLL 555
+EG F SM RD I P H V + G+ AYEF+K E + + +W LL
Sbjct: 525 DEGLRIFESMKRDFKIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSLL 584
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSA--HIMLSNVYAEANMWDETAKVRKIMKEKSL 613
C+ H + LG + ++L + D A ++LSN+YAE W+ K+RK M+EK L
Sbjct: 585 GACRLHGHIELGEEVSNRLLEMNSVDRLAGYQVLLSNMYAEEANWETVDKLRKSMREKGL 644
Query: 614 KKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
+K+ GCSW + + F + + +++E++ +L++ + D +
Sbjct: 645 RKEVGCSWIDTGGLLVRFVSKDKDHTRCEEIYEMLERLAMEMEDNDH 691
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 151/281 (53%), Gaps = 3/281 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N +L+MY + + + + ++F++MPE++V+SW+ +ISGF Q G+ E L M
Sbjct: 238 SVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQ 297
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ T +SA ++ + GK+ H + R G++ + + + LI+MY K GL+
Sbjct: 298 KQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDG-MDSYLIDMYAKSGLIR 356
Query: 129 SAQFVFDAS--LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+Q VF+ + R+ +W ++++ Y Q G F L + + + + AS+L A
Sbjct: 357 ISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPA 416
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
C+ LG++ +G Q+H + + +L+ + FV L+++Y+K ++ A VF+ + +
Sbjct: 417 CSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTY 476
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ +I GY Q G A+ LF M SG+ P +TF VL A
Sbjct: 477 TTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSA 517
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 211/457 (46%), Gaps = 16/457 (3%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG-MPEVALNYFRLMVCCVLEPNYY 77
MY + ++ +K+FD E++ W+ +I G Q E + + M +
Sbjct: 146 MYAELGCLDLCRKVFDSCLEKSAEVWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDV 205
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T++ A++A + G+++H ++ L+ V N ++ MY +C + ++ VF+
Sbjct: 206 TFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKM 265
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
E++ +SW +++S + Q G GL + +K G + S+L A + L N ++G
Sbjct: 266 PEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNREIGK 325
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF--SNIQLPDLTAWSALIGGYAQ 255
Q H+ + + ++FD + LI++YAK + ++ RVF +NIQ D W+A+I GY Q
Sbjct: 326 QTHAYLIRHGIKFDGMDSY-LIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQ 384
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G +A F M L P+ VT + +L A + + G+QLH + I+ FV
Sbjct: 385 NGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFV 444
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
++D YSK + + F + E + V++ +I G+ A+ L M G
Sbjct: 445 RTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGI 504
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA----LVDMYAKCGRLN 431
P+ T+ +L+ S ++ G + + + D + +A + DM + GR+
Sbjct: 505 QPDAITFVAVLSACSYAGLVDEGLRIFESMKR---DFKIQPSTAHYCCVADMLGRVGRVI 561
Query: 432 DARKVFDHLSSKNLV--SWNTMLVGYAQHG---LGRE 463
+A + L + V W ++L HG LG E
Sbjct: 562 EAYEFVKQLGEEGHVIEIWGSLLGACRLHGHIELGEE 598
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I N+ L+ MY K IN A+ +F + ERN ++++ +I G+ Q GM E AL
Sbjct: 434 IRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYGQHGMGENAL 493
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
+ F M ++P+ T+V +SAC+ G G I M R ++ ++ C+ +M
Sbjct: 494 SLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKRDFKIQPSTAHYCCVADM 553
Query: 121 YGKCG-LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
G+ G ++ + +FV Q GE H ++I+
Sbjct: 554 LGRVGRVIEAYEFV-------------------KQLGEEGHVIEIW-------------- 580
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI--NLYAK 224
S+LGAC + G++++G ++ + + + D+ ++ N+YA+
Sbjct: 581 -GSLLGACRLHGHIELGEEVSNRLLEMN-SVDRLAGYQVLLSNMYAE 625
>gi|218186285|gb|EEC68712.1| hypothetical protein OsI_37194 [Oryza sativa Indica Group]
Length = 787
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 193/629 (30%), Positives = 325/629 (51%), Gaps = 8/629 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G N + LLLMY K RI AQ+ F + +++ W+A++ G+ G A+
Sbjct: 161 VRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAI 220
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ +M L P+ YTY+ AV AC+ G+++H + S LE N+ V N L++MY
Sbjct: 221 STVLVMHHSGLAPDRYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMY 280
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+ +A VF +++++SW ++ S + + + ++G +E + +
Sbjct: 281 FRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFS 340
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L N +G+QI +L ++ + VA +IN+ +C LD A F ++
Sbjct: 341 VLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFR 400
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+ +I GY ++ +A+ LF + G P E T+S VL AF + Q+H
Sbjct: 401 NIVTWNEIIAGYGLFSRSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIH 460
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKC-ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
++I+K GF+S FV+ +++ + ++ SLK ++ + ++VSW A+I+ L
Sbjct: 461 AIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLN 520
Query: 361 GEAIELLKDMLFEGHC---PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
E I L LF G P+ + + +LN ++ I + H ++K G ++ +
Sbjct: 521 DEVIFLFN--LFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVA 578
Query: 418 SALVDMYAKCGRLNDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
SA+VD YAKCG + A F +SS + + +NTML YA HGL EAL +Y M + K
Sbjct: 579 SAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAK 638
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+ P TF+ +LSAC H+GLVE+G F++M+ +G+ P + A +V L A +G A
Sbjct: 639 LNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPERANYACLVDLLARKGLLDEA 698
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
I + P +P VWR L++GC+ H + LG AAE+IL P A++ LSNVYA+
Sbjct: 699 KGVIDAMPFQPWPAVWRSLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADD 758
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
W + R+ M + L+K G S E+
Sbjct: 759 GEWQSAEETRRRMVQNKLQKVHGYSRVEM 787
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/556 (26%), Positives = 269/556 (48%), Gaps = 9/556 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N+LL+ Y + ++ A K+FDEMP RN++SW+A++S ++ G P + +F M+
Sbjct: 67 NYLLIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFC 126
Query: 74 PNYYTYVGAVSACASRGDARSGK-----EIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
PN + ++AC S S K +HG R+GL+ N V + L+ MY K G ++
Sbjct: 127 PNEFALATMLTACHSMLAHSSNKLPIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIA 186
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+AQ F ++ W ++L Y G H + L+ SG+A ++ S + AC+
Sbjct: 187 AAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACS 246
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ +G Q+H LV LE + V L+++Y + + + A+ VF I+ D +W+
Sbjct: 247 ISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNT 306
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+ G+A + M +G P+EVTFS +L + G Q+ +L + G
Sbjct: 307 MFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHG 366
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
++ VAN V++ +C LL+ + F + ++V+WN +IAG+ +A+ L +
Sbjct: 367 YTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSRSEDAMRLFR 426
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC- 427
++ G P+ +TYS +L+ + +Q H I+K GF S + ++L+ A
Sbjct: 427 SLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAF 486
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI-KPNDNTFIGV 486
G + + K+ + LVSW ++ + +HGL E + ++++ + + KP++ V
Sbjct: 487 GSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATV 546
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFIKSSPIE 545
L+AC + L+ +S++ G S ++VV +A C T F S
Sbjct: 547 LNACANAALIRH-CRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSAT 605
Query: 546 PNKVVWRCLLSGCKTH 561
+ +++ +L+ H
Sbjct: 606 NDAIMYNTMLTAYANH 621
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 220/488 (45%), Gaps = 10/488 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I S N N L+ MY + + A +F ++ +++ +SW+ + SGF+ +
Sbjct: 261 VIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAV 320
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
Y M +PN T+ + ++ +A G +I YR G N V+N +INM
Sbjct: 321 FGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINM 380
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+CGLL A F + RN ++W +++ Y +++F G EF+
Sbjct: 381 LFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSRSEDAMRLFRSLVCIGERPDEFTY 440
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC-EKLDLASRVFSNIQ 239
++VL A + QIH+++ K +FV+ LI A + + ++ +
Sbjct: 441 SAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSG 500
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMF--SSGLMPSEVTFSYVLGAFADVKETIGG 297
+L +W A+I + + G E I LF +F S P E + VL A A+
Sbjct: 501 KMELVSWGAIISAFLKHGLNDEVIFLF-NLFRGDSTNKPDEFILATVLNACANAALIRHC 559
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE--HDVVSWNALIAGHL 355
R +HSL++K G S+ VA+ V+D Y+KC + + F + +D + +N ++ +
Sbjct: 560 RCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYA 619
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNV 414
EA+ L ++M P T+ IL+ S + +E GK ++ G
Sbjct: 620 NHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPER 679
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQE 473
+ LVD+ A+ G L++A+ V D + + + W +++ G H G + L + + Q
Sbjct: 680 ANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIH--GNKQLGVLAAEQI 737
Query: 474 NKIKPNDN 481
++ P+ +
Sbjct: 738 LRMAPSSD 745
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/633 (30%), Positives = 312/633 (49%), Gaps = 94/633 (14%)
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS--------------------- 151
VSNC+I+ Y + G L A+ +FD ERN +SW +L+S
Sbjct: 89 VSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQN 148
Query: 152 ----------YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS 201
+ + G + LK+F +SGV ++ + SV+ AC LG+ +GM I
Sbjct: 149 VVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILG 208
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW--------------- 246
LV K E V+ LI L + ++DLA RVF ++ D+ +W
Sbjct: 209 LVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLRE 268
Query: 247 ----------------SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
SA+I Y+Q G A EA+ LF KM G P+ F+ L A A
Sbjct: 269 ARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALAS 328
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
++ G +H + K+G F+ ++++D Y KC ++ FD + E +VV WN++
Sbjct: 329 LRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSM 388
Query: 351 -------------------------------IAGHLASCHYGEAIELLKDMLFEGHCPNL 379
IAG+L + + +E+ +L G PN
Sbjct: 389 VGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNK 448
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
T+S++L + I +++ G H I+K G ++ +G+AL DMYAKCG + +++VF+
Sbjct: 449 STFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFER 508
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE-NKIKPNDNTFIGVLSACVHIGLVEE 498
+ KN +SW M+ G A+ G E+L ++ M+ +++ PN+ + VL AC H GLV++
Sbjct: 509 MPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDK 568
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
G YFNSM + +GI P+ H VV L + G+ A EFI++ P +P W LLSGC
Sbjct: 569 GLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGC 628
Query: 559 KTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTG 618
K +KD + A+K+ +++ +++LSN+YA A W + + +RK+M+EK LKK G
Sbjct: 629 KKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGG 688
Query: 619 CSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
CSW E++N++H F + + Q +++ + L
Sbjct: 689 CSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLL 721
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/503 (24%), Positives = 215/503 (42%), Gaps = 126/503 (25%)
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK----------L 228
+C S+L + G + G +H+ + K +++A+ L+ LY C K
Sbjct: 23 TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82
Query: 229 DLASRVFSNI-------------------QLPDLT--AWSALIGGYAQLGKA-------- 259
D + V SN ++P+ +WSALI G + G+
Sbjct: 83 DGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFE 142
Query: 260 -----------------------CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
EA+ LF ++ SG+ P++VTF+ V+ A ++ +
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 297 GRQLHSLIIKMGFSSFTFVANT-------------------------------VLDFYSK 325
G + L++K GF + V+N+ +LD Y +
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
L E+ + FDEM E + +SW+A+IA + S + EA++L M+ EG PN+ ++
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L+ + + A+ G H + K G D +V IGS+L+D+Y KCG+ +D R VFD + KN+
Sbjct: 323 LSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNV 382
Query: 446 VSWNTMLVGYAQHGLG-------------------------------REALEIYSMMQEN 474
V WN+M+ GY+ +G + LE+++ + +
Sbjct: 383 VCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVS 442
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
PN +TF VL AC I +++G + +I+ GI + ++ ++A G
Sbjct: 443 GQTPNKSTFSSVLCACASIASLDKGMNVHGKIIK-LGIQYDIFVGTALTDMYAKCGDIGS 501
Query: 535 AYEFIKSSPIEPNKVVWRCLLSG 557
+ + + P E N++ W ++ G
Sbjct: 502 SKQVFERMP-EKNEISWTVMIQG 523
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 163/350 (46%), Gaps = 63/350 (18%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNV------------------- 41
++ +GF + N L+ + ++ I+ A+++FD M +R+V
Sbjct: 210 VVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREA 269
Query: 42 ------------ISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASR 89
ISWSA+I+ +SQ G E AL F MV +PN + +SA AS
Sbjct: 270 RRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASL 329
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL----------- 138
+G IHG + + G++ + + + LI++Y KCG + VFD L
Sbjct: 330 RALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMV 389
Query: 139 --------------------ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
E+N +SW ++++ Y + + L++F SG ++
Sbjct: 390 GGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKS 449
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +SVL ACA + +L GM +H + K +++D FV L ++YAKC + + +VF +
Sbjct: 450 TFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERM 509
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGA 287
+ +W+ +I G A+ G A E++ LF +M +S + P+E+ VL A
Sbjct: 510 PEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFA 559
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G ++ L MY K I ++++F+ MPE+N ISW+ +I G ++ G +
Sbjct: 474 IIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVES 533
Query: 61 LNYFRLM-VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLI 118
L F M + PN + + AC+ G G M + G++ C++
Sbjct: 534 LILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVV 593
Query: 119 NMYGKCGLLSSA-QFVFDASLERNSISWVSLLS 150
++ + G L A +F+ + + +W +LLS
Sbjct: 594 DLLSRSGRLYEAEEFIRTIPFQPEANAWAALLS 626
>gi|357162206|ref|XP_003579338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g20730-like [Brachypodium distachyon]
Length = 558
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 173/529 (32%), Positives = 302/529 (57%), Gaps = 1/529 (0%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
R G+ +H ++ S + H+S L+ Y K G +++A+ VFD R+ +SW +++S Y
Sbjct: 28 RRGRSVHHQIIASAAPPDLHMSTKLVIFYAKHGDVAAARKVFDGMPHRSVVSWTAMVSGY 87
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
+ G+ L +F L SGV ++F+ SV ACA G ++ G Q+H+ V K D
Sbjct: 88 SRNGQTREALDLFTLMLASGVRPNQFTYGSVASACAGAGCVRSGEQVHACVAKGRFVGDV 147
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
FV L++++ +C + A ++F+ ++ D+ AW+AL+ G + + +A+ L M
Sbjct: 148 FVQSALMDMHLRCGSVVDAMQLFAEMERKDVVAWNALLRGLVERAQYGDALGLLPSMLRG 207
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
++P TF L A V +H+ IIK+G+ V +++D Y+KC L +
Sbjct: 208 AMLPDHFTFGSALKACGAVSVLANVELIHTCIIKLGYWGEKVVIGSIIDAYAKCRGLSSA 267
Query: 333 LKTFDEMDEHDVVSWNALIAGH-LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+D + E D+VS ALI+G+ + H +A+EL + +G + S++L + ++
Sbjct: 268 RLIYDSICEPDLVSSTALISGYSMDRNHSEDAMELFCKIHRKGLRIDGVLLSSLLGLCAN 327
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTM 451
+ ++ +G Q H + K ++V + +A+VDMYAK G DAR+ FD + +N+VSW ++
Sbjct: 328 VASLRFGTQIHAYMCKRQPMTDVALDNAVVDMYAKAGEFADARRAFDEMPYRNVVSWTSL 387
Query: 452 LVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG 511
+ ++G G +A+ ++ M E+ +KPND TF+ +LSAC H GL +G YF SM+ +G
Sbjct: 388 ITACGKNGFGEDAVSLFDRMVEDGVKPNDVTFLSLLSACGHSGLTSKGMEYFTSMMSKYG 447
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA 571
I PR +H +S + L A GQ + A++ +++ IEPN ++ +L CKTH + LG AA
Sbjct: 448 IDPRAEHYSSAIDLLARGGQLKDAWKLVQNIDIEPNSSMFGAMLGACKTHGSMPLGETAA 507
Query: 572 EKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCS 620
+ + + PE + + +L+N+YAE+++W++ + RK+M E S K GCS
Sbjct: 508 KNLFTIAPESSVHYAVLANMYAESSLWEDAQRTRKLMAETSGGKVAGCS 556
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 244/486 (50%), Gaps = 13/486 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I S P++ L++ Y K + A+K+FD MP R+V+SW+A++SG+S+ G A
Sbjct: 37 IIASAAPPDLHMSTKLVIFYAKHGDVAAARKVFDGMPHRSVVSWTAMVSGYSRNGQTREA 96
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F LM+ + PN +TY SACA G RSG+++H + + + V + L++M
Sbjct: 97 LDLFTLMLASGVRPNQFTYGSVASACAGAGCVRSGEQVHACVAKGRFVGDVFVQSALMDM 156
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+ +CG + A +F ++ ++W +LL + ++ L + + + F+
Sbjct: 157 HLRCGSVVDAMQLFAEMERKDVVAWNALLRGLVERAQYGDALGLLPSMLRGAMLPDHFTF 216
Query: 181 ASVLGAC---AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
S L AC +VL N+++ IH+ + K +K V +I+ YAKC L A ++ +
Sbjct: 217 GSALKACGAVSVLANVEL---IHTCIIKLGYWGEKVVIGSIIDAYAKCRGLSSARLIYDS 273
Query: 238 IQLPDLTAWSALIGGYAQLGKACE-AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
I PDL + +ALI GY+ E A++LF K+ GL V S +LG A+V
Sbjct: 274 ICEPDLVSSTALISGYSMDRNHSEDAMELFCKIHRKGLRIDGVLLSSLLGLCANVASLRF 333
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G Q+H+ + K + + N V+D Y+K ++ + FDEM +VVSW +LI
Sbjct: 334 GTQIHAYMCKRQPMTDVALDNAVVDMYAKAGEFADARRAFDEMPYRNVVSWTSLITACGK 393
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV-KPGFDSNVV 415
+ +A+ L M+ +G PN T+ ++L+ G + ++ K G D
Sbjct: 394 NGFGEDAVSLFDRMVEDGVKPNDVTFLSLLSACGHSGLTSKGMEYFTSMMSKYGIDPRAE 453
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALE-IYSM 470
S+ +D+ A+ G+L DA K+ ++ N + ML HG LG A + ++++
Sbjct: 454 HYSSAIDLLARGGQLKDAWKLVQNIDIEPNSSMFGAMLGACKTHGSMPLGETAAKNLFTI 513
Query: 471 MQENKI 476
E+ +
Sbjct: 514 APESSV 519
>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
Length = 921
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 308/599 (51%), Gaps = 14/599 (2%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
T G + + + +L ++ + + +++FD MP R V++W+ +I+ ++Q G AL
Sbjct: 329 TLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALE 388
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+ C +EP+ + AC+ + G+ +H R+ E + V L++MY
Sbjct: 389 LYH---CMDIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYV 445
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG L+ A+ FD R+ ISW SL+++Y L++F GV + + +
Sbjct: 446 KCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCT 505
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
V+ AC+ L +L G +HS V D+FV L+++Y+K ++D A VF +I +
Sbjct: 506 VIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKR 565
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+W ++ Q G + EA++++ ++ G P FS L + +++ R +H
Sbjct: 566 YPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHG 625
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
+I F ++N +++ Y+KC LEE+ FD+M E + VSW +I G+ + E
Sbjct: 626 VIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAE 685
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+EL K M + PN + +++ +D+ A+ G++ H + G +N VI +ALV+
Sbjct: 686 ALELYKAMDVQ---PNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVN 742
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MYAKCG+L AR+ FD + +WN+M YAQ G G + LE+Y M ++PN T
Sbjct: 743 MYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGIT 802
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK-- 540
+ VL AC H+G++EE H F M+ DHGI+P +H + + L G+ A + +K
Sbjct: 803 LLSVLVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMA 862
Query: 541 -----SSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
S P V W L CKTH D AAEK+ DPED++ +++LS Y+
Sbjct: 863 SGESGSEAASPVAVSAWMSFLGACKTHNDWGRAAGAAEKLYELDPEDSAPYVLLSQTYS 921
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 163/550 (29%), Positives = 287/550 (52%), Gaps = 12/550 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+ + N LL +Y K + +++++F+ M R V +W+ +I+ + Q + AL FR M
Sbjct: 33 DTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFRRMD 92
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH--VSNCLINMYGKCGL 126
P+ T+ + AC S D +GK IH ++ S ++ + + N L+ MYGKCG
Sbjct: 93 A---PPSSITFTSVLGACCSPDDLETGKAIHRQIGASSPQIQADEILQNSLVTMYGKCGS 149
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG-VAISEFSCASVLG 185
L A+ VF +N+ SW +++++Y Q G +++F G V + A VL
Sbjct: 150 LEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLT 209
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
AC+ LG+L+ GM+IH+L+ +E V+ GLI+LY K + A +VF +++ D+
Sbjct: 210 ACSTLGDLETGMRIHALIRSKGVE-SAMVSTGLIDLYGKWGFFEDALQVFESVRDRDVVI 268
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+A I G++ A++LF KM + GL + VTFS +L A +++++ G+ + I
Sbjct: 269 WTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIY 328
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
+G + + +L +++C L + + FD M VV+W +IA + + EA+E
Sbjct: 329 TLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALE 388
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L M E P+ SN+L S + +E G+ H I F+ ++++ + LVDMY
Sbjct: 389 LYHCMDIE---PDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYV 445
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KCG L +AR+ FD +++++SW +++ Y+ GREALE++ M+ ++PN TF
Sbjct: 446 KCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCT 505
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
V+ AC + + G + ++ IS A +V +++ G+ A S P++
Sbjct: 506 VIDACSRLSSLLPGRALHSRVVATGHISDEFVGNA-LVSMYSKFGRVDFARVVFDSIPVK 564
Query: 546 PNKVVWRCLL 555
WR +L
Sbjct: 565 -RYPSWRVML 573
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 171/621 (27%), Positives = 297/621 (47%), Gaps = 46/621 (7%)
Query: 11 ITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF-RLMVC 69
I N L+ MY K + DA+++F + +N SW+A+I+ ++Q G A+ F +M
Sbjct: 135 ILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSE 194
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
+EP+ TY G ++AC++ GD +G IH + G+E ++ VS LI++YGK G
Sbjct: 195 GRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVE-SAMVSTGLIDLYGKWGFFED 253
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A VF++ +R+ + W + +++ G+ L++F G+ + + + +L AC+
Sbjct: 254 ALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSN 313
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
L + + G I ++ LE+D + G+++L+A+C L +F + + W+ +
Sbjct: 314 LEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTM 373
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I Y Q G + EA++L+ M + P ++ S VL A + +K GR +HS I F
Sbjct: 374 IAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDF 430
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
V ++D Y KC L E+ +TFD DV+SW +LI + EA+E+
Sbjct: 431 EPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHS 490
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M EG PN T+ +++ S + ++ G+ H +V G S+ +G+ALV MY+K GR
Sbjct: 491 MELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGR 550
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
++ AR VFD + K SW MLV Q+G EALE+YS + +P F L +
Sbjct: 551 VDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVS 610
Query: 490 CVHI-----------------------------------GLVEEGWHYFNSMIRDHGISP 514
C + G +EE F+ M + +S
Sbjct: 611 CTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVS- 669
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKI 574
+++ +A G+ A E K+ ++PN + + ++S C LV G+ ++
Sbjct: 670 ----WTTMIGGYAQNGRPAEALELYKAMDVQPNFIAFVPVISSCADLGALVEGQRVHARL 725
Query: 575 LSTDPEDTSAHIM-LSNVYAE 594
++ + L N+YA+
Sbjct: 726 SDAGLQNNEVIVTALVNMYAK 746
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/542 (28%), Positives = 281/542 (51%), Gaps = 8/542 (1%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ +Y K+ DA ++F+ + +R+V+ W+A I+ G AL FR M L+ N
Sbjct: 241 LIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQAN 300
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
T+ ++AC++ D +GK I R+Y GLE + + + +++++ +CG L + +FD
Sbjct: 301 NVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFD 360
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
R ++W +++++Y Q G + L+++ + + + ++VL AC+ L NL+
Sbjct: 361 RMPHRTVVTWTTMIAAYNQRGYSMEALELY---HCMDIEPDDIALSNVLQACSRLKNLEQ 417
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +HS + E V L+++Y KC L A R F + D+ +W++LI Y+
Sbjct: 418 GRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSH 477
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
EA+++F M G+ P+ +TF V+ A + + + GR LHS ++ G S FV
Sbjct: 478 ENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFV 537
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
N ++ YSK ++ + FD + SW ++ + H EA+E+ + EG
Sbjct: 538 GNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGF 597
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P +S L + + + + H I F ++V+ + L+++YAKCG L +AR
Sbjct: 598 RPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARL 657
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
VFD ++ KN VSW TM+ GYAQ+G EALE+Y M ++PN F+ V+S+C +G
Sbjct: 658 VFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMD---VQPNFIAFVPVISSCADLGA 714
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+ EG ++ + D G+ + ++V+++A G+ A EF S+ P+ W +
Sbjct: 715 LVEG-QRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYC-PDAGAWNSMA 772
Query: 556 SG 557
+
Sbjct: 773 TA 774
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/509 (30%), Positives = 258/509 (50%), Gaps = 21/509 (4%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T+ +SACA D GK++H R+ S +++ + N L+N+Y KCG L ++ +F+A
Sbjct: 1 TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
R +W +++++Y Q L+ F R+ S + SVLGAC +L+ G
Sbjct: 61 ERRTVATWNTMITAYVQHDFFQEALEAF---RRMDAPPSSITFTSVLGACCSPDDLETGK 117
Query: 198 QIHSLVFKCA--LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
IH + + ++ D+ + L+ +Y KC L+ A RVF I+ + +W+A+I YAQ
Sbjct: 118 AIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQ 177
Query: 256 LGKACEAIDLFVKMFSSGLM-PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
G AI++F M S G + P +T++ VL A + + + G ++H+LI G S
Sbjct: 178 NGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVES-AM 236
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V+ ++D Y K E++L+ F+ + + DVV W A IA + G A+EL + M EG
Sbjct: 237 VSTGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEG 296
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
N T+S IL S++ E GK I G + + V+ ++ ++A+CG L R
Sbjct: 297 LQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTR 356
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
++FD + + +V+W TM+ Y Q G EALE+Y M I+P+D VL AC +
Sbjct: 357 EMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMD---IEPDDIALSNVLQACSRLK 413
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG---QTRRAYEFIKSSPIEPNKVVW 551
+E+G +S I P + +V ++ G + RR ++ K+ + + W
Sbjct: 414 NLEQG-RAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDV----ISW 468
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPE 580
L++ +H++ GR A E S + E
Sbjct: 469 TSLITA-YSHEN--FGREALEVFHSMELE 494
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 146/287 (50%), Gaps = 3/287 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + N L+ MY KF R++ A+ +FD +P + SW ++ +Q G A
Sbjct: 526 VVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEA 585
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L + + P + A+ +C + D + IHG + S + +SN L+N+
Sbjct: 586 LEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNV 645
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L A+ VFD E+N +SW +++ Y Q G L+++ + V + +
Sbjct: 646 YAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELY---KAMDVQPNFIAF 702
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
V+ +CA LG L G ++H+ + L+ ++ + L+N+YAKC KL LA F +
Sbjct: 703 VPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYC 762
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
PD AW+++ YAQ G + ++L+ +M G+ P+ +T VL A
Sbjct: 763 PDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVA 809
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 186/635 (29%), Positives = 319/635 (50%), Gaps = 62/635 (9%)
Query: 85 ACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF----DASL-- 138
AC+S G R ++HG + G N + N +I+MY KC + +A+ VF SL
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 139 -------------------------ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
ER+S+SW +++S++ G H+ L F+ G
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
+ + ASVL ACA + + + G +H+ + + D V GL+++YAKC +D + R
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKR 181
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
VF+ ++ ++ W++LI G A G E D+F +M ++ + +LG
Sbjct: 182 VFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETN 241
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW------ 347
G QLH +K G +S V N L Y+KC E++ F+ M HDV+SW
Sbjct: 242 ISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITS 301
Query: 348 -------------------------NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
NA++ + + + E ++L ML + P+ T+
Sbjct: 302 FSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITF 361
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
++ S++ + G Q VK G S+V + ++ + +Y++CGR+ +A+ +FD +
Sbjct: 362 VTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQE 421
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
KNL+SWN+++ GYAQ+G G + +EI+ M KP+ T+I +LS C H GLV+E ++
Sbjct: 422 KNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYH 481
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
FNSM +D GIS ++H +V LF G + A + I P +PN +W LLS C+ H
Sbjct: 482 FNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHH 541
Query: 563 DLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWT 622
D + A + +L + E+ ++I+L+N Y+ + ++VR++MKEK ++KD GCSW
Sbjct: 542 DTEMAELAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCSWI 601
Query: 623 ELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
E+ N++H F+ + + Q D+++ + + + D
Sbjct: 602 EVCNRVHVFTANDTSHPQVKDIYKALEDIVKKIKD 636
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 238/509 (46%), Gaps = 37/509 (7%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P++ ++N ++ Y K + A F +MPER+ +SW+ +IS FS G+ +L F M
Sbjct: 57 PSLFSWNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEM 116
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
+PN TY +SACA+ D + GK +H R+ R L+ V N L++MY KCGL+
Sbjct: 117 WIQGCQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLI 176
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
+++ VF+ E N ++W SL+S G IF RK V + F A++LG C
Sbjct: 177 DASKRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVC 236
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
N+ +G Q+H K + V +++YAKC + AS F + D+ +W+
Sbjct: 237 EGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWT 296
Query: 248 ALIGGY-------------------------AQLGKAC------EAIDLFVKMFSSGLMP 276
+I + A LG C E + L++ M + P
Sbjct: 297 TMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRP 356
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
+TF ++GA +++ + G Q+ S +K+G S V N+ + YS+C +EE+ F
Sbjct: 357 DWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLF 416
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
D + E +++SWN+++ G+ + + IE+ ++ML G P+ TY IL+ S ++
Sbjct: 417 DSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVK 476
Query: 397 WGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVG 454
K + K G + +VD++ + G L A + D + K N W +L
Sbjct: 477 EAKYHFNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSA 536
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTF 483
H E+ + +N ++ N F
Sbjct: 537 CRIH----HDTEMAELAMKNLLELNTENF 561
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 37/284 (13%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G + +V N L MY K A F+ M +VISW+ +I+ FS G E A
Sbjct: 253 VKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERAR 312
Query: 62 NYFR-------------------------------LMVCCVLEPNYYTYVGAVSACASRG 90
+YF LM+ + P++ T+V + AC+
Sbjct: 313 DYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELA 372
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
++ G +I + + GL + V N I +Y +CG + AQ +FD+ E+N ISW S++
Sbjct: 373 ISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMG 432
Query: 151 SYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK-VGMQIHSLV--FKCA 207
Y Q GE + ++IF +G + ++L C+ G +K +S+ F +
Sbjct: 433 GYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTKDFGIS 492
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-PDLTAWSALI 250
+ + FV M ++L+ + L LA + + P+ + W AL+
Sbjct: 493 VTLEHFVCM--VDLFGRAGLLKLALDMIDQMPFKPNASIWGALL 534
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G +V N + +Y + RI +AQ LFD + E+N+ISW++++ G++Q G +
Sbjct: 385 VKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVI 444
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINM 120
F+ M+ +P++ TY+ +S C+ G + K M + G+ + C++++
Sbjct: 445 EIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTKDFGISVTLEHFVCMVDL 504
Query: 121 YGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
+G+ GLL A + D + N+ W +LLS+
Sbjct: 505 FGRAGLLKLALDMIDQMPFKPNASIWGALLSA 536
>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32430, mitochondrial; Flags: Precursor
gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 191/626 (30%), Positives = 336/626 (53%), Gaps = 14/626 (2%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
TSGF V N ++ MY K R ++A +F+ + + +V+SW+ ++SGF ++ALN
Sbjct: 104 TSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD---NQIALN 160
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+ M + + +TY A+S C G ++ + ++GLE + V N I MY
Sbjct: 161 FVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYS 220
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH-VHGLKIFLLSRKSGVAISEFSCA 181
+ G A+ VFD ++ ISW SLLS Q G + IF + GV + S
Sbjct: 221 RSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFT 280
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SV+ C +LK+ QIH L K E V L++ Y+KC L+ VF +
Sbjct: 281 SVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER 340
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ +W+ +I +A+ +F+ M G+ P+EVTF ++ A ++ G ++H
Sbjct: 341 NVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIH 395
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
L IK GF S V N+ + Y+K E LE++ K F+++ +++SWNA+I+G +
Sbjct: 396 GLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSH 455
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILN---ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA+++ E PN YT+ ++LN + DI +++ G++ H ++K G +S V+ S
Sbjct: 456 EALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDI-SVKQGQRCHAHLLKLGLNSCPVVSS 513
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAK G ++++ KVF+ +S KN W +++ Y+ HG + ++ M + + P
Sbjct: 514 ALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAP 573
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ VL+AC G+V++G+ FN MI + + P +H + +V + G+ + A E
Sbjct: 574 DLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEEL 633
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
+ P P + + + +L C+ H ++ +G AE + PE + +++ + N+YAE W
Sbjct: 634 MSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEW 693
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTEL 624
D+ A++RK M++K++ K+ G SW ++
Sbjct: 694 DKAAEIRKAMRKKNVSKEAGFSWIDV 719
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/545 (28%), Positives = 271/545 (49%), Gaps = 24/545 (4%)
Query: 29 AQKLFDEMPERN-VISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYY-TYVGAVSAC 86
A KLFD +RN S + IS + P AL+ F+ L+ Y+ ++ V+ C
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKEN----LQLGYFGRHMDEVTLC 82
Query: 87 ----ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
A RGD + G +IHG SG VSN ++ MY K G +A +F+ ++ +
Sbjct: 83 LALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDV 142
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
+SW ++LS + ++ L + + +GV F+ ++ L C +G+Q+ S
Sbjct: 143 VSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQST 199
Query: 203 VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK-ACE 261
V K LE D V I +Y++ A RVF + D+ +W++L+ G +Q G E
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 262 AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
A+ +F M G+ V+F+ V+ + RQ+H L IK G+ S V N ++
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 322 FYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYT 381
YSKC +LE F +M E +VVSW +I S + +A+ + +M F+G PN T
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVT 374
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
+ ++N I+ G + H +K GF S +G++ + +YAK L DA+K F+ ++
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG--LVEEG 499
+ ++SWN M+ G+AQ+G EAL+++ + + PN+ TF VL+A V++G
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMF-LSAAAETMPNEYTFGSVLNAIAFAEDISVKQG 493
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK 559
+++ G++ ++++ ++A RG + E + + + N+ VW ++S
Sbjct: 494 QRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNIDES-EKVFNEMSQKNQFVWTSIISAYS 551
Query: 560 THKDL 564
+H D
Sbjct: 552 SHGDF 556
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 234/444 (52%), Gaps = 10/444 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV- 59
++ +G +++ N + MY + A+++FDEM +++ISW++L+SG SQ G
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
A+ FR M+ +E ++ ++ ++ C D + ++IHG + G E V N L++
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG+L + + VF ERN +SW +++SS + IFL R GV +E +
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVT 374
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++ A +K G++IH L K + V I LYAK E L+ A + F +I
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG--AFADVKETIGG 297
++ +W+A+I G+AQ G + EA+ +F+ ++ MP+E TF VL AFA+ G
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQG 493
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
++ H+ ++K+G +S V++ +LD Y+K ++ES K F+EM + + W ++I+ + +
Sbjct: 494 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSH 553
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVI 416
+ + L M+ E P+L T+ ++L + ++ G + +++ + +
Sbjct: 554 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEH 613
Query: 417 GSALVDMYAKCGRLNDARKVFDHL 440
S +VDM + GRL +A ++ +
Sbjct: 614 YSCMVDMLGRAGRLKEAEELMSEV 637
>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 193/657 (29%), Positives = 342/657 (52%), Gaps = 4/657 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GFH N + L+ Y +N + ++F + + N+ ++A++ ++ G E L
Sbjct: 51 ILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTL 110
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
++ MV + P+ TY + +C+S + G+ IHG + + G +L V+ L MY
Sbjct: 111 LVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMY 170
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGL-KIFLLSRKSGVAISEFSC 180
+C +A +FD ++ + W S L++ ++ G+ ++F + F+
Sbjct: 171 EECIEFENAHQLFDKRSVKD-LGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTF 229
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++L A L ++++ +H + L D V +++LY+K L A ++F +
Sbjct: 230 FNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPE 289
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+ +I YA+ GK E ++LF M SG+ T V+ + A +K G+Q
Sbjct: 290 KDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQT 349
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ I++ G S V N+++D Y +C++L+ + K F+ M + V+SW+A+I G++ +
Sbjct: 350 HAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQS 409
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
A+ L M +G + NIL I A+E K H +K G S + +AL
Sbjct: 410 LTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTAL 469
Query: 421 VDMYAKCGRLNDARKVFDH--LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+ YAKCG + A+++F+ + K+L+ WN+M+ +A HG + ++Y+ M+ + KP
Sbjct: 470 LITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKP 529
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+G+L+ACV+ GLVE+G +F M +G P +H A +V+L G A E
Sbjct: 530 DQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGEL 589
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
+K+ PI+P+ VW LLS CK H L +AAEK+++ +P + +I+LSN+YA A W
Sbjct: 590 VKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKW 649
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
D AK+R ++ K LKK GCSW E+ + F + + D++ ++ L + +
Sbjct: 650 DGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEI 706
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 223/469 (47%), Gaps = 2/469 (0%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
++IH R G N +S+ LI+ Y GLL+ + VF + ++ N + ++L + +
Sbjct: 44 QQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRY 103
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
GE L ++ + E + VL +C+ N+ G IH + K + VA
Sbjct: 104 GESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVA 163
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L +Y +C + + A ++F + DL S+L Q +F +M + L+
Sbjct: 164 TALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLV 223
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P TF +L A + + +H + I S V VL YSK L ++ K
Sbjct: 224 PDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKL 283
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
FD+M E D V WN +IA + E +EL K M G +L+T +++ + + +
Sbjct: 284 FDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCV 343
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGY 455
+WGKQTH I++ G DS V + ++L+DMY +C L+ A K+F+ ++ K+++SW+ M+ GY
Sbjct: 344 DWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGY 403
Query: 456 AQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
++G AL ++S M+ + I+ + I +L A VHIG + E Y + G++
Sbjct: 404 VKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGAL-ENVKYLHGYSMKLGLTSL 462
Query: 516 MDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVV-WRCLLSGCKTHKD 563
+++ +A G A + I+ ++ W ++S H D
Sbjct: 463 PSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGD 511
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 191/402 (47%), Gaps = 2/402 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF + L MY + +A +LFD+ +++ S+L + Q E
Sbjct: 151 LVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGI 210
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F M+ L P+ +T+ + A + K +H S L + V+ ++++
Sbjct: 211 FRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSL 270
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K L A+ +FD E++ + W ++++Y + G+ L++F +SG+ F+
Sbjct: 271 YSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTA 330
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
V+ + A L + G Q H+ + + + V LI++Y +C+ LD A ++F+ +
Sbjct: 331 LPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTD 390
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +WSA+I GY + G++ A+ LF KM S G+ V +L AF + + L
Sbjct: 391 KSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYL 450
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE--MDEHDVVSWNALIAGHLASC 358
H +K+G +S + +L Y+KC +E + + F+E +D+ D++ WN++I+ H
Sbjct: 451 HGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHG 510
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
+ + +L M P+ T+ +L + +E GK+
Sbjct: 511 DWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKE 552
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 381 TYSNILN----ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
T S +LN + S +I+ +Q H + GF N + S L+D YA G LN + +V
Sbjct: 22 TQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQV 81
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC------ 490
F + NL +N +L ++G L +Y M + P++ T+ VL +C
Sbjct: 82 FCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNV 141
Query: 491 -----VHIGLVEEGWHYFN 504
+H LV+ G+ F+
Sbjct: 142 GFGRTIHGYLVKLGFDLFD 160
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/582 (29%), Positives = 318/582 (54%), Gaps = 34/582 (5%)
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGV 173
N ++++Y K GLLS Q +F+ R+ +SW +S Y G ++++ L+ + + +
Sbjct: 75 NTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAM 134
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK--------- 224
++ + +++L C+ + +G QI+ + K D FV L+++Y K
Sbjct: 135 NLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKR 194
Query: 225 ----------------------CEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEA 262
C ++ + R+F ++ D +W+ +I G Q G EA
Sbjct: 195 YFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREA 254
Query: 263 IDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDF 322
+D+F +M +G + TF VL A + G+Q+H+ +I+ FV + ++D
Sbjct: 255 LDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDM 314
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
YSKC ++ + F M + +V+SW A++ G+ + EA+++ +M G P+ +T
Sbjct: 315 YSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTL 374
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
++++ +++ ++E G Q HC + G S + + +AL+ +Y KCG ++ ++F ++
Sbjct: 375 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNI 434
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
++ VSW +L GYAQ G E + ++ M + +KP+ TFIGVLSAC GLVE+G Y
Sbjct: 435 RDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQY 494
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
F SMI++HGI P +DH ++ L G+ A FI + P P+ V W LLS C+ H
Sbjct: 495 FESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHG 554
Query: 563 DLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWT 622
D+ +G++AA+ +++ +P++ +++++LS++YA WD+ A++R+ M++K ++K+ G SW
Sbjct: 555 DMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWI 614
Query: 623 ELQNKMHYFST-SRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ + K+H FS + + F G ++ + +L+ + + GYVPD
Sbjct: 615 KYKGKVHVFSADDQSSPFLG-QIYAELEKLNYKMIEEGYVPD 655
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 140/487 (28%), Positives = 238/487 (48%), Gaps = 34/487 (6%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
PN+ ++N +L +Y K ++ Q++F+ MP R+ +SW+ ISG++ G A+ ++L
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 67 MVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M+ + N T+ + C+ G++I+G++ + G + V + L++MY K G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 126 LLSSAQFVFDASLERN-------------------------------SISWVSLLSSYCQ 154
L+ A+ FD ERN SISW +++ Q
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
G L +F R +G A+ +F+ SVL AC L L G QIH+ V + + + FV
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
L+++Y+KC + A VF + ++ +W+A++ GY Q G + EA+ +F +M +G+
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGV 367
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
P + T V+ + A++ G Q H + G SF V+N ++ Y KC E S +
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHR 427
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
F EM+ D VSW AL+AG+ E I L + ML G P+ T+ +L+ S
Sbjct: 428 LFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGL 487
Query: 395 IEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS-KNLVSWNTML 452
+E G Q ++K G V + ++D+ + GRL +AR +++ ++V W T+L
Sbjct: 488 VEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLL 547
Query: 453 VGYAQHG 459
HG
Sbjct: 548 SSCRVHG 554
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 191/397 (48%), Gaps = 37/397 (9%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNV----------------------- 41
GF +V + L+ MY K I DA++ FDEMPERNV
Sbjct: 168 GFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLF 227
Query: 42 --------ISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDAR 93
ISW+ +I+G Q G+ AL+ FR M + +T+ ++AC S
Sbjct: 228 CGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALG 287
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
GK+IH + R+ + N V + L++MY KC + SA+ VF ++N ISW ++L Y
Sbjct: 288 EGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYG 347
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
Q G +KIF +++GV +F+ SV+ +CA L +L+ G Q H L
Sbjct: 348 QNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFIT 407
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
V+ LI LY KC + + R+F+ + + D +W+AL+ GYAQ GKA E I LF +M + G
Sbjct: 408 VSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHG 467
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQ-LHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
L P VTF VL A + G Q S+I + G ++D + LEE+
Sbjct: 468 LKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEA 527
Query: 333 LKTFDEMDEH-DVVSWNALIAGHLASCHYGEAIELLK 368
+ M H DVV W L L+SC +E+ K
Sbjct: 528 RNFINNMPCHPDVVGWATL----LSSCRVHGDMEIGK 560
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 203/440 (46%), Gaps = 65/440 (14%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L C N ++H L+ K + + F++ LI Y K L A VF +I
Sbjct: 9 ASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQ 68
Query: 241 PDLTAWSAL-------------------------------IGGYAQLGKACEAIDLFVKM 269
P+L +W+ + I GYA G +A+ ++ M
Sbjct: 69 PNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLM 128
Query: 270 FSSGLMP-SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M + +TFS +L + + GRQ++ I+K GF S FV + ++D Y+K L
Sbjct: 129 LKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGL 188
Query: 329 LEESLKTFDEMDEHDVV-------------------------------SWNALIAGHLAS 357
+ ++ + FDEM E +VV SW +I G + +
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQN 248
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA+++ ++M G + +T+ ++L + A+ GKQ H +++ NV +G
Sbjct: 249 GLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVG 308
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
SALVDMY+KC + A VF + KN++SW MLVGY Q+G EA++I+ MQ N ++
Sbjct: 309 SALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVE 368
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+D T V+S+C ++ +EEG F+ G+ + +++ L+ G T ++
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALITLYGKCGSTENSHR 427
Query: 538 FIKSSPIEPNKVVWRCLLSG 557
I ++V W LL+G
Sbjct: 428 LFTEMNIR-DEVSWTALLAG 446
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 126/252 (50%), Gaps = 2/252 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + NV + L+ MY K I A+ +F MP++NVISW+A++ G+ Q G E A
Sbjct: 296 VIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEA 355
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M +EP+ +T +S+CA+ G + H R SGL VSN LI +
Sbjct: 356 VKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITL 415
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG ++ +F R+ +SW +LL+ Y Q G+ + +F G+ +
Sbjct: 416 YGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTF 475
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
VL AC+ G ++ G+Q S++ + + +I+L + +L+ A +N+
Sbjct: 476 IGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMP 535
Query: 240 L-PDLTAWSALI 250
PD+ W+ L+
Sbjct: 536 CHPDVVGWATLL 547
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y+++L + + K+ HC I+K + + L+ Y K G L A VFDH+
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
NL SWNT+L Y++ GL + +I+++M
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLM 97
>gi|242046440|ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
gi|241924468|gb|EER97612.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
Length = 695
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 181/627 (28%), Positives = 339/627 (54%), Gaps = 7/627 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSR--INDAQKLFDEMPERNVISWSALISGFSQIGMPE 58
++ G+ + + L+ Y + + A ++FD M RN +W+A+I G G
Sbjct: 67 LLVRGYRTSTVLAAQLVRAYARLRDGGLGHAVRVFDGMLTRNSFAWNAVIKGLVDAGRFS 126
Query: 59 VALNYFRLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIH----GRMYRSGLELNSHV 113
AL ++ MV + + +TY + ACA+ G G+++ + R + N V
Sbjct: 127 EALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRKVQENVEADIARGIAKCNVFV 186
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
L++M+ KCG L A+ VF++ R+ +W +++ G+ + + + + G
Sbjct: 187 QCALVDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGTVHGGDWLEVMTLLKRMKSEGF 246
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
A+V+ AC + L+ G +H V KC + D V L+++Y KC +LD A+
Sbjct: 247 RPDSMILATVIPACGKVKELRTGTALHGCVVKCGVGVDTCVLNALVDMYCKCARLDFAAS 306
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+F +I D+ +WS +I G++Q + ++ LF +M +SG+ P+ T + +L + ++++
Sbjct: 307 LFWSIDHKDVISWSTIIAGHSQNRRYHVSVSLFSEMVASGVKPNSTTLASILPSLSELRL 366
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+++H ++ G F+A+ ++DFYS+ ++E+ F+ ++D+V N++I G
Sbjct: 367 FRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKEAEIVFEFTPKNDLVVSNSMIGG 426
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
++ + A+ LL+ +L EG P+ T ++L + + + GK+ H ++ S
Sbjct: 427 YVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQHSRLLQGKELHAYAIRHNISSC 486
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ +AL DMY KCG L A ++F ++ +N V++NT++ +HG +A ++ +M+
Sbjct: 487 CSVSNALTDMYCKCGCLELAFEIFLLMTERNTVTYNTLISSLGKHGHAEQAFFLFDLMKR 546
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+ + P+ TF+ +LS C H GL+++G +++SM+RD+ ISP +H + +V L++ G+
Sbjct: 547 DGVSPDKVTFVALLSCCSHEGLIDKGLCFYDSMLRDYNISPDKEHYSCIVDLYSRSGRLD 606
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A+ FI + P V CLLS C+ H + + AE+I +P D HI+LSN+YA
Sbjct: 607 AAWSFIANLQEVPEIDVLGCLLSACREHNRMDIAELVAERIFEQNPNDPGYHILLSNIYA 666
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCS 620
A MW E ++R +++E+SLKK TG S
Sbjct: 667 SAGMWSEVTRIRTMIEERSLKKRTGNS 693
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 13/174 (7%)
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC--GRLNDARKVFDHLSSKNLVSWNT 450
PA+ ++ H ++ G+ ++ V+ + LV YA+ G L A +VFD + ++N +WN
Sbjct: 55 PALTEVRRLHAALLVRGYRTSTVLAAQLVRAYARLRDGGLGHAVRVFDGMLTRNSFAWNA 114
Query: 451 MLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
++ G G EAL+ Y M+ + + + T+ VL AC +G+VE+G ++ D
Sbjct: 115 VIKGLVDAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRKVQENVEAD 174
Query: 510 --HGISPRMDHI-ASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
GI+ + ++V +FA C G+ R +E ++ + W ++ G
Sbjct: 175 IARGIAKCNVFVQCALVDMFAKCGCLGEARNVFESMEVRDL----AAWTAMIGG 224
>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
Length = 688
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 191/626 (30%), Positives = 336/626 (53%), Gaps = 14/626 (2%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
TSGF V N ++ MY K R ++A +F+ + + +V+SW+ ++SGF ++ALN
Sbjct: 29 TSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD---NQIALN 85
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+ M + + +TY A+S C G ++ + ++GLE + V N I MY
Sbjct: 86 FVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYS 145
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH-VHGLKIFLLSRKSGVAISEFSCA 181
+ G A+ VFD ++ ISW SLLS Q G + IF + GV + S
Sbjct: 146 RSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFT 205
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SV+ C +LK+ QIH L K E V L++ Y+KC L+ VF +
Sbjct: 206 SVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER 265
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ +W+ +I +A+ +F+ M G+ P+EVTF ++ A ++ G ++H
Sbjct: 266 NVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIH 320
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
L IK GF S V N+ + Y+K E LE++ K F+++ +++SWNA+I+G +
Sbjct: 321 GLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSH 380
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILN---ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA+++ E PN YT+ ++LN + DI +++ G++ H ++K G +S V+ S
Sbjct: 381 EALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDI-SVKQGQRCHAHLLKLGLNSCPVVSS 438
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAK G ++++ KVF+ +S KN W +++ Y+ HG + ++ M + + P
Sbjct: 439 ALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAP 498
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ VL+AC G+V++G+ FN MI + + P +H + +V + G+ + A E
Sbjct: 499 DLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEEL 558
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
+ P P + + + +L C+ H ++ +G AE + PE + +++ + N+YAE W
Sbjct: 559 MSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEW 618
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTEL 624
D+ A++RK M++K++ K+ G SW ++
Sbjct: 619 DKAAEIRKAMRKKNVSKEAGFSWIDV 644
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 246/486 (50%), Gaps = 16/486 (3%)
Query: 82 AVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERN 141
A+ AC RGD + G +IHG SG VSN ++ MY K G +A +F+ ++ +
Sbjct: 9 ALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 66
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS 201
+SW ++LS + ++ L + + +GV F+ ++ L C +G+Q+ S
Sbjct: 67 VVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQS 123
Query: 202 LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK-AC 260
V K LE D V I +Y++ A RVF + D+ +W++L+ G +Q G
Sbjct: 124 TVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGF 183
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
EA+ +F M G+ V+F+ V+ + RQ+H L IK G+ S V N ++
Sbjct: 184 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 243
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
YSKC +LE F +M E +VVSW +I S + +A+ + +M F+G PN
Sbjct: 244 SRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEV 298
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T+ ++N I+ G + H +K GF S +G++ + +YAK L DA+K F+ +
Sbjct: 299 TFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDI 358
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG--LVEE 498
+ + ++SWN M+ G+AQ+G EAL+++ + + PN+ TF VL+A V++
Sbjct: 359 TFREIISWNAMISGFAQNGFSHEALKMF-LSAAAETMPNEYTFGSVLNAIAFAEDISVKQ 417
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
G +++ G++ ++++ ++A RG + E + + + N+ VW ++S
Sbjct: 418 GQRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNIDES-EKVFNEMSQKNQFVWTSIISAY 475
Query: 559 KTHKDL 564
+H D
Sbjct: 476 SSHGDF 481
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 234/444 (52%), Gaps = 10/444 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV- 59
++ +G +++ N + MY + A+++FDEM +++ISW++L+SG SQ G
Sbjct: 125 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 184
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
A+ FR M+ +E ++ ++ ++ C D + ++IHG + G E V N L++
Sbjct: 185 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 244
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG+L + + VF ERN +SW +++SS + IFL R GV +E +
Sbjct: 245 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVT 299
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++ A +K G++IH L K + V I LYAK E L+ A + F +I
Sbjct: 300 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 359
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG--AFADVKETIGG 297
++ +W+A+I G+AQ G + EA+ +F+ ++ MP+E TF VL AFA+ G
Sbjct: 360 FREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQG 418
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
++ H+ ++K+G +S V++ +LD Y+K ++ES K F+EM + + W ++I+ + +
Sbjct: 419 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSH 478
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVI 416
+ + L M+ E P+L T+ ++L + ++ G + +++ + +
Sbjct: 479 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEH 538
Query: 417 GSALVDMYAKCGRLNDARKVFDHL 440
S +VDM + GRL +A ++ +
Sbjct: 539 YSCMVDMLGRAGRLKEAEELMSEV 562
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 114/217 (52%), Gaps = 8/217 (3%)
Query: 278 EVTFSYVLGA-FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 336
EVT L A D+K G Q+H GF+SF V+N V+ Y K + +L F
Sbjct: 3 EVTLCLALKACRGDLKR---GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 59
Query: 337 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
+ + + DVVSWN +++G + A+ + M G + +TYS L+
Sbjct: 60 ENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 116
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
G Q +VK G +S++V+G++ + MY++ G AR+VFD +S K+++SWN++L G +
Sbjct: 117 LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLS 176
Query: 457 QHG-LGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
Q G G EA+ I+ M ++ + +F V++ C H
Sbjct: 177 QEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 213
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 175/608 (28%), Positives = 321/608 (52%), Gaps = 39/608 (6%)
Query: 92 ARSGKEIHGR-MYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
A+SG+ R ++ + N N L++ L+ + +F + ER+++S+ +L++
Sbjct: 59 AKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALIT 118
Query: 151 SYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ G ++++ L R+ V + + ++++ + L + +G +H V +
Sbjct: 119 GFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFG 178
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLP---------------------------- 241
FV L+++YAK + A RVF ++
Sbjct: 179 AYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLM 238
Query: 242 ---DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL---GAFADVKETI 295
D W+ ++ G Q G EA+D+F +M + G+ + TF +L GA A ++E
Sbjct: 239 VDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEE-- 296
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+Q+H+ I + + FV + ++D YSKC + + F M +++SW A+I G+
Sbjct: 297 -GKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYG 355
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+ EA+ +M +G P+ +T ++++ +++ ++E G Q HC + G +
Sbjct: 356 QNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYIT 415
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ +ALV +Y KCG + DA ++FD +S + VSW ++ GYAQ G +E ++++ M N
Sbjct: 416 VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANG 475
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+KP+ TFIGVLSAC GLVE+G YF+SM +DHGI P DH ++ L++ G+ + A
Sbjct: 476 LKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEA 535
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
EFIK P P+ W LLS C+ ++ +G++AAE +L TDP++ +++++L +++A
Sbjct: 536 EEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAK 595
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
W E A +R+ M+++ +KK+ GCSW + +NK+H FS + ++E + L+ +
Sbjct: 596 GQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655
Query: 656 FDGGYVPD 663
+ GY PD
Sbjct: 656 AEEGYKPD 663
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 234/482 (48%), Gaps = 40/482 (8%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR-L 66
PN+ T N LL + D ++LF MPER+ +S++ALI+GFS G P ++ +R L
Sbjct: 77 PNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRAL 136
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
+ + P T + ++ D G +H ++ R G + V + L++MY K GL
Sbjct: 137 LREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGL 196
Query: 127 LSSAQFVF-------------------------DAS------LERNSISWVSLLSSYCQC 155
+ A+ VF DA ++R+SI+W ++++ Q
Sbjct: 197 IRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQN 256
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G + L +F R GV I +++ S+L AC L L+ G QIH+ + + E + FV
Sbjct: 257 GLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVG 316
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L+++Y+KC + LA VF + ++ +W+A+I GY Q + EA+ F +M G+
Sbjct: 317 SALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK 376
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P + T V+ + A++ G Q H L + G + V+N ++ Y KC +E++ +
Sbjct: 377 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRL 436
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
FDEM HD VSW AL+ G+ E I+L + ML G P+ T+ +L+ S +
Sbjct: 437 FDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLV 496
Query: 396 EWGKQTHCCIVKPGFDSNVVI----GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNT 450
E G + K D +V + ++D+Y++ GR +A + + S + W T
Sbjct: 497 EKGCDYFDSMQK---DHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553
Query: 451 ML 452
+L
Sbjct: 554 LL 555
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 185/384 (48%), Gaps = 43/384 (11%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
V+ YN L+ ++ I DA+ LF M +R+ I+W+ +++G +Q G+ AL+ FR M
Sbjct: 211 TVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMR 270
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ + YT+ ++AC + GK+IH + R+ E N V + L++MY KC +
Sbjct: 271 AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIR 330
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ VF RN ISW +++ Y Q ++ F + G+ +F+ SV+ +CA
Sbjct: 331 LAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCA 390
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L +L+ G Q H L L V+ L+ LY KC ++ A R+F + D +W+A
Sbjct: 391 NLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTA 450
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
L+ GYAQ GKA E IDLF KM ++GL P VTF VL A
Sbjct: 451 LVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSAC-------------------- 490
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVS----WNALIAGHLASCHYGEA 363
S+ L+E+ FD M +H +V + +I + S + EA
Sbjct: 491 ---------------SRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEA 535
Query: 364 IELLKDMLFEGHCPNLYTYSNILN 387
E +K M H P+ + ++ +L+
Sbjct: 536 EEFIKQM---PHSPDAFGWATLLS 556
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 206/445 (46%), Gaps = 71/445 (15%)
Query: 181 ASVLGACAVLGN---LKVGMQIHSLVFKCALEFDK-FVAMGLINLYAKCEKLDLASRVFS 236
A++L + A G ++V +H L+ K L+ F+ L+ YAK +L A RVF
Sbjct: 13 AAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFD 72
Query: 237 NIQLPDL-------------------------------TAWSALIGGYAQLGKACEAIDL 265
+ P+L +++ALI G++ G ++ L
Sbjct: 73 EMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQL 132
Query: 266 FVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
+ + + P+ +T S ++ + + + G +H ++++GF ++ FV + ++D Y+
Sbjct: 133 YRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYA 192
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY------------------------ 360
K L+ ++ + F EM+ VV +N LI G L C
Sbjct: 193 KMGLIRDARRVFQEMEAKTVVMYNTLITG-LLRCKMIEDAKGLFQLMVDRDSITWTTMVT 251
Query: 361 --------GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
EA+++ + M EG + YT+ +IL + A+E GKQ H I + ++
Sbjct: 252 GLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYED 311
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
NV +GSALVDMY+KC + A VF ++ +N++SW M+VGY Q+ EA+ +S MQ
Sbjct: 312 NVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQ 371
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+ IKP+D T V+S+C ++ +EEG F+ + G+ + ++V L+ G
Sbjct: 372 MDGIKPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSI 430
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSG 557
A+ ++V W L++G
Sbjct: 431 EDAHRLFDEMSFH-DQVSWTALVTG 454
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 17/265 (6%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
+ NV + L+ MY K I A+ +F M RN+ISW+A+I G+ Q E A+ F
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFS 368
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M ++P+ +T +S+CA+ G + H SGL VSN L+ +YGKCG
Sbjct: 369 EMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ A +FD + +SW +L++ Y Q G+ + +F +G+ + VL
Sbjct: 429 SIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLS 488
Query: 186 ACAVLGNLKVG------MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI- 238
AC+ G ++ G MQ + D + M I+LY++ + A +
Sbjct: 489 ACSRAGLVEKGCDYFDSMQKDHGIVPID---DHYTCM--IDLYSRSGRFKEAEEFIKQMP 543
Query: 239 QLPDLTAWSALIG-----GYAQLGK 258
PD W+ L+ G ++GK
Sbjct: 544 HSPDAFGWATLLSSCRLRGNMEIGK 568
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG + N L+ +Y K I DA +LFDEM + +SW+AL++G++Q G + +
Sbjct: 406 LVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETI 465
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG--LELNSHVSNCLIN 119
+ F M+ L+P+ T++G +SAC+ G G + M + + ++ H + C+I+
Sbjct: 466 DLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYT-CMID 524
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+Y + G A +F+ ++ W +LLSS
Sbjct: 525 LYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 274/482 (56%), Gaps = 1/482 (0%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L +C V ++ G Q+H+ + + + F+ +A L+NLY C L A +F I
Sbjct: 5 ASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISK 64
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L W+ +I GYA G AI L+ +M GL+P + TF +VL A + + G+++
Sbjct: 65 RNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKI 124
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H +I+ G S FV ++D Y+KC +E + + FD++DE DVV WN+++A + +
Sbjct: 125 HKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQP 184
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
E++ L + M F G P T+ + S+D + GK+ H + GF+SN + +AL
Sbjct: 185 DESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTAL 244
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMYAK G +N AR +F+ L K +VSWN M+ GYA HG EAL+++ M+ K+ P+
Sbjct: 245 MDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMK-GKVLPDH 303
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+GVL+AC H GL+ EG +F SMI D I P + H ++ L G+ AY+ I
Sbjct: 304 ITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIM 363
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+EP+ VW LL CK H ++ +G A EK++ +P+D +++LSN+YA+A WD
Sbjct: 364 EMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDG 423
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
A++R +M K LKK CSW E+ NK+H F + + + ++ + + + + GY
Sbjct: 424 VARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGY 483
Query: 661 VP 662
P
Sbjct: 484 AP 485
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 204/416 (49%), Gaps = 13/416 (3%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y + +C R GK++H R+ + G+ N ++ L+N+Y C L++A +FD
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
+RN W ++ Y G + + ++ R G+ +F+ VL AC+ L ++ G +
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
IH V + LE D FV LI++YAKC ++ A +VF I D+ W++++ Y+Q G+
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
E++ L M +GL P+E TF + A AD G++LH + GF S V
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-P 377
++D Y+K + + F+ ++E VVSWNA+I G+ H EA++L K+M +G P
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM--KGKVLP 301
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARK- 435
+ T+ +L S + GK ++ V + ++D+ CGRL +A K
Sbjct: 302 DHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKL 361
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHG---LGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ + + W +L HG +G ALE + +++P+D +LS
Sbjct: 362 IMEMRVEPDAGVWGALLHSCKIHGNVEMGELALE-----KLVELEPDDGGNYVILS 412
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 177/349 (50%), Gaps = 3/349 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N + L+ +Y + + +A LFD + +RN+ W+ +I G++ G E+A++ +
Sbjct: 31 GISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLY 90
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M L P+ +T+ + AC++ GK+IH + RSGLE + V LI+MY KC
Sbjct: 91 YQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKC 150
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + SA+ VFD ER+ + W S+L++Y Q G+ L + + +G+ +E + +
Sbjct: 151 GCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISI 210
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
A A G L G ++H ++ E + V L+++YAK +++A +F ++ +
Sbjct: 211 AASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVV 270
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR-QLHSL 303
+W+A+I GYA G A EA+DLF +M ++P +TF VL A + G+ S+
Sbjct: 271 SWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSM 329
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALI 351
I ++D C LEE+ K EM E D W AL+
Sbjct: 330 ISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALL 378
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 131/254 (51%), Gaps = 7/254 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG +V L+ MY K + A+++FD++ ER+V+ W+++++ +SQ G P+ +
Sbjct: 128 VIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDES 187
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L R+M L+P T+V +++A A G GKE+HG +R G E N V L++M
Sbjct: 188 LALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDM 247
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G ++ A+ +F+ E+ +SW ++++ Y G L +F K V +
Sbjct: 248 YAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLF-KEMKGKVLPDHITF 306
Query: 181 ASVLGACAVLGNLKVG-MQIHSLV--FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
VL AC+ G L G M S++ F + M I+L C +L+ A ++
Sbjct: 307 VGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCM--IDLLGHCGRLEEAYKLIME 364
Query: 238 IQL-PDLTAWSALI 250
+++ PD W AL+
Sbjct: 365 MRVEPDAGVWGALL 378
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 8/178 (4%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y+++L AIE GKQ H I + G N ++ + LV++Y C L +A +FD +S
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
+NL WN M+ GYA +G A+ +Y M++ + P+ TF VL AC + +EEG
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+IR G+ + A+++ ++A C R+ ++ I E + V W +L+
Sbjct: 124 IHKDVIRS-GLESDVFVGAALIDMYAKCGCVESARQVFDKID----ERDVVCWNSMLA 176
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 188/626 (30%), Positives = 326/626 (52%), Gaps = 10/626 (1%)
Query: 45 SALISGFSQIGMPEVALNYFRLMVCCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRM 102
+ LI+ FS+ +P +A R ++ C P+ +T+ + A S S ++H
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNA---SAAQLHACA 93
Query: 103 YRSGLELNS-HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHG 161
R GL S S L++ Y + G +S A VFD ER+ +W ++LS C+
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153
Query: 162 LKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINL 221
+ +F GVA + +SVL C +LG+ + + +H K L+ + FV LI++
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDV 213
Query: 222 YAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTF 281
Y K L+ A VF ++ DL W+++I G Q G+ A+ +F M SG+ P +T
Sbjct: 214 YGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTL 273
Query: 282 SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA-NTVLDFYSKCELLEESLKTFDEMD 340
+ A A + + LH +++ G+ +A N ++D Y+K +E + + FD M
Sbjct: 274 VSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMP 333
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDML-FEGHCPNLYTYSNILNISSDIPAIEWGK 399
D VSWN LI G++ + EA+E M EG T+ ++L S + A++ G
Sbjct: 334 VQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGM 393
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
+ H +K G + +V +G+ L+D+YAKCG+L +A +F+ + ++ WN ++ G HG
Sbjct: 394 RMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHG 453
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
G EAL ++S MQ+ IKP+ TF+ +L+AC H GLV++G +F+ M + I P H
Sbjct: 454 HGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHY 513
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP 579
A + + GQ A+ FI++ PI+P+ VW LL C+ H ++ +G+ A++ + DP
Sbjct: 514 ACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDP 573
Query: 580 EDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQ- 638
E+ ++++SN+YA+ WD +VR +++ ++L+K G S E++ ++ F + +
Sbjct: 574 ENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEP 633
Query: 639 -FQGIDLHEVMNQLSVHLFDGGYVPD 663
Q ++ + L + GYV D
Sbjct: 634 HPQHEEIQAELRSLLAKIRSVGYVSD 659
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 231/457 (50%), Gaps = 6/457 (1%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P+V T L+ Y++F RI++A K+FDEM ER+V +W+A++SG + A+ F M
Sbjct: 101 PSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRM 160
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
V + + T + C GD +H + GL+ V N LI++YGK G+L
Sbjct: 161 VGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGML 220
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
AQ VF R+ ++W S++S Q G+ LK+F R SGV+ + S+ A
Sbjct: 221 EEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAI 280
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVA-MGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
A G+ + +H V + + D +A ++++YAK ++ A R+F ++ + D +W
Sbjct: 281 AQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSW 340
Query: 247 SALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
+ LI GY Q G A EA++ + M GL + TF VL A++ + G ++H+L I
Sbjct: 341 NTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSI 400
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K+G + +V ++D Y+KC L E++ F++M WNA+I+G H EA+
Sbjct: 401 KIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALT 460
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--SALVDM 423
L M EG P+ T+ ++L S ++ G+ + +++ +D + + + DM
Sbjct: 461 LFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGR-SFFDVMQVTYDIVPIAKHYACMADM 519
Query: 424 YAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG 459
+ G+L++A ++ K + W +L HG
Sbjct: 520 LGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHG 556
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 193/399 (48%), Gaps = 13/399 (3%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G + N L+ +Y K + +AQ +F M R++++W+++ISG Q G AL
Sbjct: 196 VKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAAL 255
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS-NCLINM 120
F+ M + P+ T V SA A GD RS K +H + R G +++ ++ N +++M
Sbjct: 256 KMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDM 315
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFS 179
Y K + +AQ +FD+ ++S+SW +L++ Y Q G ++ + + + G+ + +
Sbjct: 316 YAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGT 375
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL A + LG L+ GM++H+L K L D +V LI+LYAKC KL A +F +
Sbjct: 376 FVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMP 435
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
W+A+I G G EA+ LF +M G+ P VTF +L A + GR
Sbjct: 436 RRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRS 495
Query: 300 LHSLIIKMGFSSFTFVAN--TVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLA 356
++++ + + + D + L+E+ M + D W AL L
Sbjct: 496 FFD-VMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGAL----LG 550
Query: 357 SCHYGEAIELLK---DMLFEGHCPNLYTYSNILNISSDI 392
+C +E+ K LFE N+ Y + N+ + +
Sbjct: 551 ACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKV 589
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 188/663 (28%), Positives = 334/663 (50%), Gaps = 30/663 (4%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDE---MPERNVISWSALISGFSQIGMPEVALN- 62
H N+ + L ++K ++ ++ F + PE N ++ LIS ++ +P+ + N
Sbjct: 19 HLNLQQTHQLHAHFIK-TQFHNPHPFFSQSHFTPEAN---YNLLISSYTNNHLPQASFNC 74
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
Y + + + + ACA G+E+HG ++G + V N L+NMY
Sbjct: 75 YLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYE 134
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG L SA+ VFD ER+ +SW ++L Y + L++ + GV +S + S
Sbjct: 135 KCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALIS 194
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM--GLINLYAKCEKLDLASRVFSNIQL 240
++ L ++K G +H + + + V+M LI++Y K L A R+F +
Sbjct: 195 LIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSK 254
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W+ +I G + + E F +M L P+E+T ++ V G+
Sbjct: 255 RSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWF 314
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +++ GF + ++D Y KC + + F+ + + DV W+ LI+ +
Sbjct: 315 HAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCM 374
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+ L +ML PN T ++L++ ++ A++ GK TH I + G + +V++ +AL
Sbjct: 375 DQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETAL 434
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
++MYAKCG + AR +F+ +++ WNTM+ G++ HG G+EALE++S M+ + ++PND
Sbjct: 435 INMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPND 494
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ + AC H GL M+H +V L G A+ I+
Sbjct: 495 ITFVSIFHACSHSGL--------------------MEHYGCLVDLLGRAGHLDEAHNIIE 534
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
+ P+ PN ++W LL+ CK HK+L LG AA KIL DP++ ++ SN+YA A W++
Sbjct: 535 NMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWND 594
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
VR+ M +KK+ G SW E+ +H+F + A Q ++E++ ++ + L + GY
Sbjct: 595 VTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGY 654
Query: 661 VPD 663
P+
Sbjct: 655 TPN 657
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/514 (25%), Positives = 237/514 (46%), Gaps = 39/514 (7%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+GF +V N L+ MY K + A+ +FD+MPER+V+SW+ ++ + + AL
Sbjct: 117 NGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRL 176
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS--NCLINMY 121
R M ++ + + ++ + D +SG+ +HG + R+ + VS LI+MY
Sbjct: 177 VREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMY 236
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G L+SAQ +FD +R+ +SW +++ + G K F + + +E +
Sbjct: 237 CKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLL 296
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S++ C +G L +G H+ + + + LI++Y KC ++ A +F+ ++
Sbjct: 297 SLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKK 356
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D+ WS LI YA + + +LFV+M ++ + P+ VT +L A+ G+ H
Sbjct: 357 DVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTH 416
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ I + G + +++ Y+KC + + F+E + D+ WN ++AG
Sbjct: 417 AYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGK 476
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE-WGKQTHCCIVKPGFDSNVVIGSAL 420
EA+EL +M G PN T+ +I + S +E +G L
Sbjct: 477 EALELFSEMESHGVEPNDITFVSIFHACSHSGLMEHYG--------------------CL 516
Query: 421 VDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH---GLG----REALEI----- 467
VD+ + G L++A + +++ + N + W +L H LG R+ LE+
Sbjct: 517 VDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNC 576
Query: 468 -YSMMQENKIKPND--NTFIGVLSACVHIGLVEE 498
YS+++ N N V A H G+ +E
Sbjct: 577 GYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKE 610
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 20/253 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GF ++ L+ MY K ++ A+ LF+ + +++V WS LIS ++ + +
Sbjct: 318 LLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQV 377
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
N F M+ ++PN T V +S CA G GK H + R GLE++ + LINM
Sbjct: 378 FNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINM 437
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG ++ A+ +F+ +++R+ W ++++ + G L++F GV ++ +
Sbjct: 438 YAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITF 497
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+ AC+ G+ H + C L++L + LD A + N+ +
Sbjct: 498 VSIFHACS-----HSGLMEH---YGC-----------LVDLLGRAGHLDEAHNIIENMPM 538
Query: 241 -PDLTAWSALIGG 252
P+ W AL+
Sbjct: 539 RPNTIIWGALLAA 551
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 177/599 (29%), Positives = 318/599 (53%), Gaps = 18/599 (3%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFV 133
+ +T+ + A G A ++H R GL ++ S L++ Y + G + A
Sbjct: 70 DAFTFPPLLRAAQGPGTA---AQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD R+ +W ++LS C+ + +F GVA + +SVL C +LG+
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+ + +H K L+ + FV +I++Y K L+ +VF + DL W+++I G+
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q G+ A+++F M SG+ P +T + A A + GGR +H +++ G+
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306
Query: 314 FVA-NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML- 371
+A N ++D Y+K +E + + FD M D VSWN LI G++ + EAI + M
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQK 366
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
EG P T+ ++L S + A++ G + H +K G + +V +G+ ++D+YAKCG+L+
Sbjct: 367 HEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLD 426
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
+A +F+ ++ WN ++ G HG G +AL ++S MQ+ I P+ TF+ +L+AC
Sbjct: 427 EAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACS 486
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
H GLV++G ++FN M +GI P H A +V +F GQ A++FI++ PI+P+ +W
Sbjct: 487 HAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIW 546
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
LL C+ H ++ +G+ A++ + DP++ ++++SN+YA+ WD +VR +++ +
Sbjct: 547 GALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQ 606
Query: 612 SLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD-------GGYVPD 663
+L+K G S E++ ++ F + +++H ++ L D GYVPD
Sbjct: 607 NLQKTPGWSSIEVKRSVNVFYSG-----NQMNIHPQHEEIQRELLDLLAKIRSLGYVPD 660
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 223/448 (49%), Gaps = 4/448 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ Y++F R+ DA + FDEM R+V +W+A++SG + A+ F MV + +
Sbjct: 110 LVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGD 169
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
T + C GD +H + GL+ V N +I++YGK G+L + VFD
Sbjct: 170 AVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFD 229
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
R+ ++W S++S + Q G+ +++F R SGV+ + S+ A A G++
Sbjct: 230 GMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICG 289
Query: 196 GMQIHSLVFKCALEFDKFVA-MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G +H + + + +A ++++YAK K++ A R+F ++ + D +W+ LI GY
Sbjct: 290 GRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYM 349
Query: 255 QLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q G A EAI ++ M GL P + TF VL A++ + G ++H+L IK G +
Sbjct: 350 QNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDV 409
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+V V+D Y+KC L+E++ F++ WNA+I+G H +A+ L M E
Sbjct: 410 YVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQE 469
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLND 432
G P+ T+ ++L S ++ G+ + G + +VDM+ + G+L+D
Sbjct: 470 GISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDD 529
Query: 433 ARKVFDHLSSK-NLVSWNTMLVGYAQHG 459
A ++ K + W +L HG
Sbjct: 530 AFDFIRNMPIKPDSAIWGALLGACRIHG 557
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 190/398 (47%), Gaps = 11/398 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ G + N ++ +Y K + + +K+FD M R++++W+++ISG Q G A+
Sbjct: 197 VKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAV 256
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS-NCLINM 120
F M + P+ T + SA A GD G+ +H M R G ++ ++ N +++M
Sbjct: 257 EMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDM 316
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFS 179
Y K + +AQ +FD+ R+++SW +L++ Y Q G + ++ + + G+ + +
Sbjct: 317 YAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGT 376
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL A + LG L+ G ++H+L K L D +V +I+LYAKC KLD A +F
Sbjct: 377 FVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTP 436
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
W+A+I G G +A+ LF +M G+ P VTF +L A + GR
Sbjct: 437 RRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRN 496
Query: 300 LHSLI-IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLAS 357
+++ G ++D + + L+++ M + D W AL L +
Sbjct: 497 FFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGAL----LGA 552
Query: 358 CHYGEAIELLK---DMLFEGHCPNLYTYSNILNISSDI 392
C +E+ K LFE N+ Y + N+ + +
Sbjct: 553 CRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKV 590
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 172/494 (34%), Positives = 276/494 (55%), Gaps = 5/494 (1%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
+ GV + + ++ C G ++ G ++H +F F+ LIN+Y K L+
Sbjct: 278 RRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLE 337
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A +F + ++ +W+ +I Y+ A+ L MF G+MP+ TFS VL A
Sbjct: 338 EAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACE 397
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ + +QLHS I+K+G S FV + ++D YSK L E+LK F EM D V WN+
Sbjct: 398 RLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNS 454
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+IA EA+ L K M G + T +++L + + +E G+Q H ++K
Sbjct: 455 IIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK-- 512
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
FD ++++ +AL+DMY KCG L DA+ +F+ ++ K+++SW+TM+ G AQ+G EAL ++
Sbjct: 513 FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFE 572
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M+ KPN T +GVL AC H GLV EGW+YF SM +GI P +H ++ L
Sbjct: 573 SMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRA 632
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
+ + I EP+ V WR LL C+ +++ L YAA++IL DP+DT A+++LS
Sbjct: 633 EKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLS 692
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMN 649
N+YA + W++ A+VR+ MK++ ++K+ GCSW E+ ++H F + Q +++ +N
Sbjct: 693 NIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLN 752
Query: 650 QLSVHLFDGGYVPD 663
Q L GYVPD
Sbjct: 753 QFICRLAGAGYVPD 766
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 226/497 (45%), Gaps = 49/497 (9%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TY + C + G R GK +H ++ +G + ++N LINMY K LL AQ +FD
Sbjct: 287 TYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKM 346
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
ERN +SW +++S+Y + +++ + GV + F+ +SVL AC L +LK
Sbjct: 347 PERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLK--- 403
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+HS + K LE D FV LI++Y+K +L A +VF + D W+++I +AQ
Sbjct: 404 QLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHS 463
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
EA+ L+ M G + T + VL A + GRQ H ++K F + N
Sbjct: 464 DGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNN 521
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
+LD Y KC LE++ F+ M + DV+SW+ +IAG + EA+ L + M +G P
Sbjct: 522 ALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKP 581
Query: 378 NLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
N T +L S + G + + PG + ++D+ + +L+D
Sbjct: 582 NHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHY----GCMLDLLGRAEKLDD 637
Query: 433 ARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
K+ ++ ++V+W T+L A L Y+ + K+ P D +LS
Sbjct: 638 MVKLIHEMNCEPDVVTWRTLLD--ACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNI- 694
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP----IEPN 547
+ IS R + +A V RG I+ P IE N
Sbjct: 695 ------------------YAISKRWNDVAEVRRTMKKRG--------IRKEPGCSWIEVN 728
Query: 548 KVVWRCLLSGCKTHKDL 564
K + +L G K+H +
Sbjct: 729 KQIHAFIL-GDKSHPQI 744
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 193/379 (50%), Gaps = 33/379 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ ++G+HP N L+ MYVKF+ + +AQ LFD+MPERNV+SW+ +IS +S + + A
Sbjct: 311 IFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRA 370
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ M + PN +T+ + AC D K++H + + GLE + V + LI++
Sbjct: 371 MRLLAFMFRDGVMPNMFTFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDV 427
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G L A VF + +S+ W S+++++ Q + L ++ R+ G + +
Sbjct: 428 YSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTL 487
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL AC L L++G Q H V K + D + L+++Y KC L+ A +F+ +
Sbjct: 488 TSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAK 545
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +WS +I G AQ G + EA++LF M G P+ +T VL A +
Sbjct: 546 KDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACS----------- 594
Query: 301 HSLIIKMGFSSFTFVANT------------VLDFYSKCELLEESLKTFDEMD-EHDVVSW 347
H+ ++ G+ F + N +LD + E L++ +K EM+ E DVV+W
Sbjct: 595 HAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTW 654
Query: 348 NALIAGHLASCHYGEAIEL 366
L L +C + ++L
Sbjct: 655 RTL----LDACRARQNVDL 669
>gi|334186756|ref|NP_193809.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635629|sp|Q9SVH0.2|PP329_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g20770
gi|332658959|gb|AEE84359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 774
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 195/639 (30%), Positives = 328/639 (51%), Gaps = 47/639 (7%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRIND-AQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +G N+ N LL MY K I D ++F+ + + N +S++A+I G ++ A
Sbjct: 165 VKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEA 224
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARS---------GKEIHGRMYRSGLELNS 111
+ FRLM ++ + +S A R S GK+IH R G +
Sbjct: 225 VQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDL 284
Query: 112 HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
H++N L+ +Y K ++ A+ +F E N +SW ++ + Q ++ R S
Sbjct: 285 HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDS 344
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G +E +C SVLGAC G+++ G
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETG----------------------------------- 369
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
R+FS+I P ++AW+A++ GY+ EAI F +M L P + T S +L + A +
Sbjct: 370 RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARL 429
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE-MDEHDVVSWNAL 350
+ GG+Q+H ++I+ S + + + ++ YS+CE +E S FD+ ++E D+ WN++
Sbjct: 430 RFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSM 489
Query: 351 IAGHLASCHYGEAIELLKDMLFEG-HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
I+G + +A+ L + M CPN +++ +L+ S + ++ G+Q H +VK G
Sbjct: 490 ISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSG 549
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ S+ + +AL DMY KCG ++ AR+ FD + KN V WN M+ GY +G G EA+ +Y
Sbjct: 550 YVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYR 609
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M + KP+ TF+ VL+AC H GLVE G +SM R HGI P +DH +V
Sbjct: 610 KMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRA 669
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
G+ A + +++P + + V+W LLS C+ H D+ L R AEK++ DP+ ++A+++LS
Sbjct: 670 GRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLS 729
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKM 628
N Y+ WD++A ++ +M + + K G SWT N +
Sbjct: 730 NTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/562 (25%), Positives = 271/562 (48%), Gaps = 51/562 (9%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V ++N L K + +A ++FD MPER+V+SW+ +IS + G E AL ++ MV
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG-LL 127
C P+ +T +SAC+ D G HG ++GL+ N V N L++MY KCG ++
Sbjct: 131 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV 190
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
VF++ + N +S+ +++ + + + +++F L + GV + +++L
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 250
Query: 188 A----------VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
A + GN ++G QIH L + D + L+ +YAK + ++ A +F+
Sbjct: 251 APREGCDSLSEIYGN-ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAE 309
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ ++ +W+ +I G+ Q ++ ++++ +M SG P+EVT VLGA + G
Sbjct: 310 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG 369
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
R++ S I + S++ N +L YS E
Sbjct: 370 RRIFSSIPQPSVSAW----NAMLSGYSNYE------------------------------ 395
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
HY EAI + M F+ P+ T S IL+ + + +E GKQ H +++ N I
Sbjct: 396 -HYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIV 454
Query: 418 SALVDMYAKCGRLNDARKVFDH-LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
S L+ +Y++C ++ + +FD ++ ++ WN+M+ G+ + L +AL ++ M + +
Sbjct: 455 SGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAV 514
Query: 477 K-PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
PN+ +F VLS+C + + G + +++ +S A + ++ G+ A
Sbjct: 515 LCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETA-LTDMYCKCGEIDSA 573
Query: 536 YEFIKSSPIEPNKVVWRCLLSG 557
+F + + N V+W ++ G
Sbjct: 574 RQFF-DAVLRKNTVIWNEMIHG 594
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 209/456 (45%), Gaps = 76/456 (16%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
SGK IHG + R G++ ++++ N L+++Y +CG A+ VFD R+ SW + L+ C
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 154 QCGEHVHGLKIF----------------LLSRK---------------SGVAISEFSCAS 182
+ G+ ++F +L RK G S F+ AS
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL-DLASRVFSNIQLP 241
VL AC+ + + GM+ H + K L+ + FV L+++YAKC + D RVF ++ P
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA------DVKETI 295
+ +++A+IGG A+ K EA+ +F M G+ V S +L A + E
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 296 G---GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
G G+Q+H L +++GF + N++L+ Y+K + + + F EM E +VVSWN +I
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
G +++E L M G PN T CI
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVT----------------------CI------- 354
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
V+G+ + G + R++F + ++ +WN ML GY+ + EA+ + MQ
Sbjct: 355 -SVLGACF-----RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+KP+ T +LS+C + +E G +IR
Sbjct: 409 FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 213/445 (47%), Gaps = 52/445 (11%)
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG---G 252
G IH + + ++ D ++ L++LY +C D A +VF + + D+ +W+A +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 253 YAQLGKACEAID----------------------------LFVKMFSSGLMPSEVTFSYV 284
LG+ACE D ++ +M G +PS T + V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 285 LGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE-LLEESLKTFDEMDEHD 343
L A + V + + G + H + +K G FV N +L Y+KC +++ ++ F+ + + +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 344 VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS---------SDIPA 394
VS+ A+I G EA+++ + M +G + SNIL+IS S+I
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
E GKQ HC ++ GF ++ + ++L+++YAK +N A +F + N+VSWN M+VG
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
+ Q +++E + M+++ +PN+ T I VL AC G VE G F+S+ + P
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----P 379
Query: 515 RMDHIASVVHLFACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA 571
+ +++ ++ A + ++ ++P+K +LS C + L G+
Sbjct: 380 SVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIH 439
Query: 572 EKILSTDPEDTSAHIM--LSNVYAE 594
++ T+ S HI+ L VY+E
Sbjct: 440 GVVIRTEISKNS-HIVSGLIAVYSE 463
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 151/289 (52%), Gaps = 2/289 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M SGF PN +T +L + + +++F +P+ +V +W+A++SG+S E A
Sbjct: 341 MRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEA 400
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ FR M L+P+ T +S+CA GK+IHG + R+ + NSH+ + LI +
Sbjct: 401 ISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAV 460
Query: 121 YGKCGLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI-SEF 178
Y +C + ++ +FD + I+ W S++S + L +F ++ V +E
Sbjct: 461 YSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET 520
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S A+VL +C+ L +L G Q H LV K D FV L ++Y KC ++D A + F +
Sbjct: 521 SFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV 580
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ W+ +I GY G+ EA+ L+ KM SSG P +TF VL A
Sbjct: 581 LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTA 629
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 180/409 (44%), Gaps = 81/409 (19%)
Query: 284 VLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHD 343
+L + D + + G+ +H I++MG S T++ N +LD Y +C + + K FDEM D
Sbjct: 12 LLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRD 71
Query: 344 VVSWNALIAGHLASCHYGEAIELL-------------------------------KDMLF 372
V SWNA + GEA E+ K M+
Sbjct: 72 VYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVC 131
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+G P+ +T +++L+ S + +G + H VK G D N+ +G+AL+ MYAKCG + D
Sbjct: 132 DGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVD 191
Query: 433 -ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS--- 488
+VF+ LS N VS+ ++ G A+ EA++++ +M E ++ + +LS
Sbjct: 192 YGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISA 251
Query: 489 ---AC--------------VHIGLVEEGW----HYFNSMIRDHGISPRMD---------- 517
C +H + G+ H NS++ + + M+
Sbjct: 252 PREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMP 311
Query: 518 --HIASVVHLFACRGQTRR---AYEFI---KSSPIEPNKVVWRCLLSGCKTHKDLVLGRY 569
++ S + GQ R + EF+ + S +PN+V +L C D+ GR
Sbjct: 312 EVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR- 370
Query: 570 AAEKILSTDPEDTSA--HIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
+I S+ P+ + + + MLS Y+ ++E + M+ ++LK D
Sbjct: 371 ---RIFSSIPQPSVSAWNAMLSG-YSNYEHYEEAISNFRQMQFQNLKPD 415
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG+ + L MY K I+ A++ FD + +N + W+ +I G+ G + A
Sbjct: 545 VVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEA 604
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLIN 119
+ +R M+ +P+ T+V ++AC+ G +G EI M R G+E C+++
Sbjct: 605 VGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVD 664
Query: 120 MYGKCGLLSSAQFVFDAS-LERNSISWVSLLSSYCQCGEHVHG 161
G+ G L A+ + +A+ + +S+ W LLSS C+ VHG
Sbjct: 665 CLGRAGRLEDAEKLAEATPYKSSSVLWEILLSS-CR----VHG 702
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 194/610 (31%), Positives = 321/610 (52%), Gaps = 42/610 (6%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL------LSSAQFVFDASLERNSISWV 146
+S + IH +M ++GL ++ + LI C L L A VF+ E N + W
Sbjct: 4 QSLRMIHAQMIKTGLHNTNYALSKLIEF---CILSPHFDGLPYAISVFETIQEPNLLIWN 60
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
++ + + V LK+++ G+ + ++ +L +CA K G QIH V K
Sbjct: 61 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKL 120
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSN----------------------------- 237
+ D +V LI++Y + +L+ A +VF
Sbjct: 121 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMF 180
Query: 238 --IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
I + D+ +W+A+I GYA+ G EA++LF M + + P E T V+ A A
Sbjct: 181 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 240
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
GRQ+HS I GF S + N ++D YSKC LE + F+ + DV+SWN LI G+
Sbjct: 241 LGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYT 300
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSN 413
Y EA+ L ++ML G PN T +IL + + AI+ G+ H I K G +
Sbjct: 301 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANA 360
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ ++L+DMYAKCG + A +VF+ + K+L SWN M+ G+A HG + +I+S M++
Sbjct: 361 SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRK 420
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
N I+P+D TF+G+LSAC H G+++ G H F SM +D+ ++P+++H ++ L G +
Sbjct: 421 NGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFK 480
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A E I + +EP+ V+W LL CK H ++ LG A+ ++ +PE+ ++++LSN+YA
Sbjct: 481 EAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYA 540
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
A W+E A R ++ +K +KK GCS E+ + +H F + +++ ++ ++ V
Sbjct: 541 TAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 600
Query: 654 HLFDGGYVPD 663
L + G+VPD
Sbjct: 601 LLEEAGFVPD 610
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 246/550 (44%), Gaps = 69/550 (12%)
Query: 1 MITSGFHPNVITYNHLL---LMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP 57
MI +G H + L+ ++ F + A +F+ + E N++ W+ + G + P
Sbjct: 13 MIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP 72
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
AL + M+ L PN YT+ + +CA + G++IHG + + G +L+ +V L
Sbjct: 73 VSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSL 132
Query: 118 INMYGKCGLLSSAQFVFDASLER-------------------------------NSISWV 146
I+MY + G L A VFD S R + +SW
Sbjct: 133 ISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWN 192
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+++S Y + G + L++F K+ V E + +V+ ACA G++++G Q+HS +
Sbjct: 193 AMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDH 252
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
+ + LI+LY+KC +L+ A +F + D+ +W+ LIGGY + EA+ LF
Sbjct: 253 GFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLF 312
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM--GFSSFTFVANTVLDFYS 324
+M SG P++VT +L A A + GR +H I K G ++ + + +++D Y+
Sbjct: 313 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYA 372
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
KC +E + + F+ + + SWNA+I G + ++ M G P+ T+
Sbjct: 373 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVG 432
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
+L+ S ++ G+ + + D+ +
Sbjct: 433 LLSACSHSGMLDLGRHIFRSMTQ------------------------------DYKMTPK 462
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
L + M+ GL +EA E+ + M+ ++P+ + +L AC G VE G +
Sbjct: 463 LEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACKMHGNVELGESFAQ 519
Query: 505 SMIRDHGISP 514
++I+ +P
Sbjct: 520 NLIKIEPENP 529
>gi|5262217|emb|CAB45843.1| putative protein [Arabidopsis thaliana]
gi|7268873|emb|CAB79077.1| putative protein [Arabidopsis thaliana]
Length = 740
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 195/639 (30%), Positives = 328/639 (51%), Gaps = 47/639 (7%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRIND-AQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +G N+ N LL MY K I D ++F+ + + N +S++A+I G ++ A
Sbjct: 131 VKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEA 190
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARS---------GKEIHGRMYRSGLELNS 111
+ FRLM ++ + +S A R S GK+IH R G +
Sbjct: 191 VQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDL 250
Query: 112 HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
H++N L+ +Y K ++ A+ +F E N +SW ++ + Q ++ R S
Sbjct: 251 HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDS 310
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G +E +C SVLGAC G+++ G
Sbjct: 311 GFQPNEVTCISVLGACFRSGDVETG----------------------------------- 335
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
R+FS+I P ++AW+A++ GY+ EAI F +M L P + T S +L + A +
Sbjct: 336 RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARL 395
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE-MDEHDVVSWNAL 350
+ GG+Q+H ++I+ S + + + ++ YS+CE +E S FD+ ++E D+ WN++
Sbjct: 396 RFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSM 455
Query: 351 IAGHLASCHYGEAIELLKDMLFEG-HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
I+G + +A+ L + M CPN +++ +L+ S + ++ G+Q H +VK G
Sbjct: 456 ISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSG 515
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ S+ + +AL DMY KCG ++ AR+ FD + KN V WN M+ GY +G G EA+ +Y
Sbjct: 516 YVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYR 575
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M + KP+ TF+ VL+AC H GLVE G +SM R HGI P +DH +V
Sbjct: 576 KMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRA 635
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
G+ A + +++P + + V+W LLS C+ H D+ L R AEK++ DP+ ++A+++LS
Sbjct: 636 GRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLS 695
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKM 628
N Y+ WD++A ++ +M + + K G SWT N +
Sbjct: 696 NTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 734
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/562 (25%), Positives = 271/562 (48%), Gaps = 51/562 (9%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V ++N L K + +A ++FD MPER+V+SW+ +IS + G E AL ++ MV
Sbjct: 37 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 96
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG-LL 127
C P+ +T +SAC+ D G HG ++GL+ N V N L++MY KCG ++
Sbjct: 97 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV 156
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
VF++ + N +S+ +++ + + + +++F L + GV + +++L
Sbjct: 157 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 216
Query: 188 A----------VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
A + GN ++G QIH L + D + L+ +YAK + ++ A +F+
Sbjct: 217 APREGCDSLSEIYGN-ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAE 275
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ ++ +W+ +I G+ Q ++ ++++ +M SG P+EVT VLGA + G
Sbjct: 276 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG 335
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
R++ S I + S++ N +L YS E
Sbjct: 336 RRIFSSIPQPSVSAW----NAMLSGYSNYE------------------------------ 361
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
HY EAI + M F+ P+ T S IL+ + + +E GKQ H +++ N I
Sbjct: 362 -HYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIV 420
Query: 418 SALVDMYAKCGRLNDARKVFDH-LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
S L+ +Y++C ++ + +FD ++ ++ WN+M+ G+ + L +AL ++ M + +
Sbjct: 421 SGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAV 480
Query: 477 K-PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
PN+ +F VLS+C + + G + +++ +S A + ++ G+ A
Sbjct: 481 LCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETA-LTDMYCKCGEIDSA 539
Query: 536 YEFIKSSPIEPNKVVWRCLLSG 557
+F + + N V+W ++ G
Sbjct: 540 RQFF-DAVLRKNTVIWNEMIHG 560
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 208/434 (47%), Gaps = 52/434 (11%)
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG---GYAQLGKACEAI 263
++ D ++ L++LY +C D A +VF + + D+ +W+A + LG+ACE
Sbjct: 2 GMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVF 61
Query: 264 D----------------------------LFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
D ++ +M G +PS T + VL A + V + +
Sbjct: 62 DGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGV 121
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE-LLEESLKTFDEMDEHDVVSWNALIAGH 354
G + H + +K G FV N +L Y+KC +++ ++ F+ + + + VS+ A+I G
Sbjct: 122 FGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGL 181
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS---------SDIPAIEWGKQTHCCI 405
EA+++ + M +G + SNIL+IS S+I E GKQ HC
Sbjct: 182 ARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLA 241
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
++ GF ++ + ++L+++YAK +N A +F + N+VSWN M+VG+ Q +++
Sbjct: 242 LRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSV 301
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
E + M+++ +PN+ T I VL AC G VE G F+S+ + P + +++
Sbjct: 302 EFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAMLSG 356
Query: 526 FACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDT 582
++ A + ++ ++P+K +LS C + L G+ ++ T+
Sbjct: 357 YSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKN 416
Query: 583 SAHIM--LSNVYAE 594
S HI+ L VY+E
Sbjct: 417 S-HIVSGLIAVYSE 429
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 151/289 (52%), Gaps = 2/289 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M SGF PN +T +L + + +++F +P+ +V +W+A++SG+S E A
Sbjct: 307 MRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEA 366
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ FR M L+P+ T +S+CA GK+IHG + R+ + NSH+ + LI +
Sbjct: 367 ISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAV 426
Query: 121 YGKCGLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVHGLKIFLLSRKSGV-AISEF 178
Y +C + ++ +FD + I+ W S++S + L +F ++ V +E
Sbjct: 427 YSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET 486
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S A+VL +C+ L +L G Q H LV K D FV L ++Y KC ++D A + F +
Sbjct: 487 SFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV 546
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ W+ +I GY G+ EA+ L+ KM SSG P +TF VL A
Sbjct: 547 LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTA 595
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 167/386 (43%), Gaps = 81/386 (20%)
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
MG S T++ N +LD Y +C + + K FDEM DV SWNA + GEA E+
Sbjct: 1 MGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEV 60
Query: 367 L-------------------------------KDMLFEGHCPNLYTYSNILNISSDIPAI 395
K M+ +G P+ +T +++L+ S +
Sbjct: 61 FDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDG 120
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND-ARKVFDHLSSKNLVSWNTMLVG 454
+G + H VK G D N+ +G+AL+ MYAKCG + D +VF+ LS N VS+ ++ G
Sbjct: 121 VFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGG 180
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS------AC--------------VHIG 494
A+ EA++++ +M E ++ + +LS C +H
Sbjct: 181 LARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCL 240
Query: 495 LVEEGW----HYFNSMIRDHGISPRMD------------HIASVVHLFACRGQTRR---A 535
+ G+ H NS++ + + M+ ++ S + GQ R +
Sbjct: 241 ALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKS 300
Query: 536 YEFI---KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSA--HIMLSN 590
EF+ + S +PN+V +L C D+ GR +I S+ P+ + + + MLS
Sbjct: 301 VEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR----RIFSSIPQPSVSAWNAMLSG 356
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKD 616
Y+ ++E + M+ ++LK D
Sbjct: 357 -YSNYEHYEEAISNFRQMQFQNLKPD 381
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG+ + L MY K I+ A++ FD + +N + W+ +I G+ G + A
Sbjct: 511 VVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEA 570
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLIN 119
+ +R M+ +P+ T+V ++AC+ G +G EI M R G+E C+++
Sbjct: 571 VGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVD 630
Query: 120 MYGKCGLLSSAQFVFDAS-LERNSISWVSLLSSYCQCGEHVHG 161
G+ G L A+ + +A+ + +S+ W LLSS C+ VHG
Sbjct: 631 CLGRAGRLEDAEKLAEATPYKSSSVLWEILLSS-CR----VHG 668
>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 185/634 (29%), Positives = 329/634 (51%), Gaps = 4/634 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G + N + Y+K+ ++ AQ+ FD ++ +SW+ ++ G G
Sbjct: 73 LIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAG 132
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F +PN + + + A G HG ++RSG V N L+++
Sbjct: 133 LCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSL 192
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
Y + + + + + S+ + +SW ++ + Q GE G +F + ++G+ +
Sbjct: 193 YAEVHMYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVT 252
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL AC L ++ +G +H LV LE D FV LI++Y+KC + A + F I
Sbjct: 253 VVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIP 312
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ +W+ ++ Y EA+ L M G EVT + VL +++ R
Sbjct: 313 EKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRS 372
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +II+ G+ S + N+V+D Y+KC L+E + FD M++ DVV+W+ +IAG +
Sbjct: 373 VHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGK 432
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EAI + K M E PN + N++ + + K H V+ G S V IG++
Sbjct: 433 PDEAISVFKQM-NEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIGTS 491
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
++DMY+KCG + + + F+ + KN+V W+ M+ + +GL EAL ++ +++N KPN
Sbjct: 492 IIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPN 551
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
T + +LSAC H GL+EEG +F SM++ HGI P ++H + +V + + G+ A E I
Sbjct: 552 AVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELI 611
Query: 540 KSSP--IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
+ P +E +W LLS C+++ ++ LG AA ++L +P ++ +++ SN+YA +
Sbjct: 612 EKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGL 671
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
++AK+R++ KEK +K G S + ++ F
Sbjct: 672 MIDSAKMRRLAKEKGVKVVAGYSLVHINSQTWRF 705
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 261/502 (51%), Gaps = 14/502 (2%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
G +HG + + G + ++ ++N I+ Y K G L SAQ FD++ ++S+SW ++
Sbjct: 66 GTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFS 125
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
G + GL F+ R + + S V+ A L G H +F+ V
Sbjct: 126 NGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSV 185
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLP-DLTAWSALIGGYAQLGKACEAIDLFVKMFS-S 272
L++LYA+ + A ++F + + D+ +WS +IGG+ Q+G+ + +F M + +
Sbjct: 186 QNSLLSLYAEVH-MYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEA 244
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G+ P VT VL A ++K+ G +H L+I G FV N+++D YSKC + +
Sbjct: 245 GIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSA 304
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
K F E+ E +++SWN +++ ++ + + EA+ LL M+ EG + T +N+L I+
Sbjct: 305 FKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHF 364
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+ H I++ G++SN ++ ++++D YAKC + AR VFD ++ K++V+W+TM+
Sbjct: 365 LDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMI 424
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC-VHIGLVEEGWHYFNSMIRDHG 511
G+A++G EA+ ++ M E I PN+ + + ++ AC V L + W + ++ R G
Sbjct: 425 AGFARNGKPDEAISVFKQMNEEVI-PNNVSIMNLMEACAVSAELRQSKWAHGIAVRR--G 481
Query: 512 ISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK----THKDLVLG 567
++ +D S++ +++ G + P + N V W ++S + H+ L+L
Sbjct: 482 LASEVDIGTSIIDMYSKCGDIEASIRAFNQIP-QKNVVCWSAMISAFRINGLAHEALML- 539
Query: 568 RYAAEKILSTDPEDTSAHIMLS 589
+ K T P +A +LS
Sbjct: 540 -FEKIKQNGTKPNAVTALSLLS 560
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 169/362 (46%), Gaps = 7/362 (1%)
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE-FSCASVLGACAVLGN 192
F A L + + +S + G L+++ R SG +S+ + S+L AC+ +
Sbjct: 6 FQAGLRLSDL--ISKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNT-S 62
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+G +H + K + +A I+ Y K LD A R F + + D +W+ ++ G
Sbjct: 63 FNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHG 122
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
G + F+K + P+ + V+ AF ++K G H I + GFS+
Sbjct: 123 NFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAI 182
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V N++L Y++ + K F EM +DVVSW+ +I G + + + ++M+
Sbjct: 183 LSVQNSLLSLYAEVHMYFAH-KLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMV 241
Query: 372 FE-GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
E G P+ T ++L +++ I G H ++ G + ++ +G++L+DMY+KC +
Sbjct: 242 TEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNV 301
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ A K F + KN++SWN ML Y + EAL + M + ++ T VL
Sbjct: 302 HSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIA 361
Query: 491 VH 492
H
Sbjct: 362 KH 363
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 195/582 (33%), Positives = 294/582 (50%), Gaps = 9/582 (1%)
Query: 88 SRGDARSGKEIHGRMYRSGLELNS----HVSNCLINMYGKCGLLSSAQFVFDASLERNSI 143
S R G+ +H R+ ++ L+S ++N LINMY K SA+ V + RN +
Sbjct: 18 STSSMRLGRVVHARIVKT---LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVV 74
Query: 144 SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV 203
SW SL+S Q G L F R+ GVA ++F+ V A A L G QIH+L
Sbjct: 75 SWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALA 134
Query: 204 FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
KC D FV ++Y K D A ++F I +L W+A I G+ EAI
Sbjct: 135 VKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAI 194
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
+ F++ G P+ +TF L A +D G Q+H L+ + GF + V N ++DFY
Sbjct: 195 EAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFY 254
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
KC+ + S F EM + VSW +L+A ++ + +A L E + + S
Sbjct: 255 GKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMIS 314
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
++L+ + + +E G+ H VK + N+ +GSALVDMY KCG + D+ + FD + K
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN--TFIGVLSACVHIGLVEEGWH 501
NLV+ N+++ GYA G AL ++ M P N TF+ +LSAC G VE G
Sbjct: 375 NLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMK 434
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
F+SM +GI P +H + +V + G +A+EFIK PI+P VW L + C+ H
Sbjct: 435 IFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMH 494
Query: 562 KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSW 621
LG AAE + DP+D+ H++LSN +A A W E VR+ MK +KK G SW
Sbjct: 495 GKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSW 554
Query: 622 TELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++N++H F + ++ ++ +L + GY PD
Sbjct: 555 ITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPD 596
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 228/482 (47%), Gaps = 14/482 (2%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P N+L+ MY K A+ + P RNV+SW++L+SG +Q G AL F M
Sbjct: 40 PPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEM 99
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
+ PN +T+ A AS +GK+IH + G L+ V +MY K L
Sbjct: 100 RREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 159
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A+ +FD ERN +W + +S+ G ++ F+ R+ G + + L AC
Sbjct: 160 DDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNAC 219
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ L +GMQ+H LVF+ + D V GLI+ Y KC+++ + +F+ + + + +W
Sbjct: 220 SDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWC 279
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+L+ Y Q + +A L+++ + S+ S VL A A + GR +H+ +K
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
FV + ++D Y KC +E+S + FDEM E ++V+ N+LI G+ A+ L
Sbjct: 340 CVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALF 399
Query: 368 KDMLFE--GHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGSAL 420
+DM G PN T+ ++L+ S A+E G + + ++PG + S +
Sbjct: 400 EDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHY----SCI 455
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
VDM + G + A + + K +S W + H G+ L I + K+ P
Sbjct: 456 VDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMH--GKPHLGILAAENLFKLDPK 513
Query: 480 DN 481
D+
Sbjct: 514 DS 515
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 2/198 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SGF +V YN L+ Y K +I ++ +F EM +N +SW +L++ + Q E A
Sbjct: 238 SGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+ ++E + + +SACA G+ IH ++ +E N V + L++MYGK
Sbjct: 298 YLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGK 357
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCA 181
CG + ++ FD E+N ++ SL+ Y G+ L +F + R G A + +
Sbjct: 358 CGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFV 417
Query: 182 SVLGACAVLGNLKVGMQI 199
S+L AC+ G ++ GM+I
Sbjct: 418 SLLSACSRAGAVENGMKI 435
>gi|414887787|tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
Length = 711
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 181/627 (28%), Positives = 339/627 (54%), Gaps = 7/627 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSR--INDAQKLFDEMPERNVISWSALISGFSQIGMPE 58
++ G+H + + L+ Y + + A ++FD MP RN +W+A+I G G
Sbjct: 83 LLVRGYHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPTRNSFAWNAVIKGLVDAGRFS 142
Query: 59 VALNYFRLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGR----MYRSGLELNSHV 113
AL ++ MV + + +TY + ACA+ G+ G+++ + R + N V
Sbjct: 143 EALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQENVETDIARGIAKGNVFV 202
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
L++M+ KCG L A+ +F++ R+ SW +++ + G+ + + + + G
Sbjct: 203 QCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAVRGGDWLEVMTLLKRMKSEGF 262
Query: 174 AISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR 233
A+V+ AC + L+ GM +H KC + D V L+++Y KC +LD+A+
Sbjct: 263 RPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNALVDMYCKCARLDMAAS 322
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+F +I D+ +WS +I G++Q ++ LF +M +SG+ P+ T + +L + ++++
Sbjct: 323 LFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIASILPSISELRL 382
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+++H ++ F+A+ ++DFY + + ++ F+ ++D+V N++I G
Sbjct: 383 LRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEFKPKNDLVVLNSMIRG 442
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
++ + A+ LL+ +L EG P+ T ++L + + + GK+ H ++ S
Sbjct: 443 YVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSC 502
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
+ +AL DMY KCG L A K+F ++ +N V++NT++ +HG +A ++ +M+
Sbjct: 503 FSVTNALTDMYCKCGCLEIANKIFLLMTERNTVTYNTLISSLGKHGHADQAFILFDLMKR 562
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
+ + P+ TF+ +LS C H GL+++G +++SM+RD+ I P +H + +V L++ G+
Sbjct: 563 DGVSPDKVTFVALLSCCSHGGLIDKGLCFYDSMLRDYNIPPDKEHYSCIVDLYSRSGKLD 622
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A+ FI + P V CLLS C+ H + + AE+I +P D HI+LSNVYA
Sbjct: 623 DAWSFIANLQEVPEIDVLGCLLSACRDHHRMDIAELVAERIFEQNPNDPGYHILLSNVYA 682
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCS 620
A MW E ++R +++E+SLKK TG S
Sbjct: 683 SAGMWSEVTRIRTMIEERSLKKRTGNS 709
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 9/154 (5%)
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC--GRLNDARKVFDHLSSKNLVSWNT 450
PA+ ++ H ++ G+ + V+ + LV YA+ G L A +VFD + ++N +WN
Sbjct: 71 PALTEVRRLHAALLVRGYHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPTRNSFAWNA 130
Query: 451 MLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
++ G G EAL Y M+++ + + T+ VL AC +G VE+G ++ D
Sbjct: 131 VIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQENVETD 190
Query: 510 --HGISPRMDHI-ASVVHLFA---CRGQTRRAYE 537
GI+ + ++V +FA C G+ R +E
Sbjct: 191 IARGIAKGNVFVQCALVDMFAKCGCLGEARNMFE 224
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 175/608 (28%), Positives = 321/608 (52%), Gaps = 39/608 (6%)
Query: 92 ARSGKEIHGR-MYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
A+SG+ R ++ + N N L++ L+ + +F + ER+++S+ +L++
Sbjct: 59 AKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALIT 118
Query: 151 SYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ G ++++ L R+ V + + ++++ + L + +G +H V +
Sbjct: 119 GFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFG 178
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLP---------------------------- 241
FV L+++YAK + A RVF ++
Sbjct: 179 AYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLM 238
Query: 242 ---DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL---GAFADVKETI 295
D W+ ++ G Q G EA+D+F +M + G+ + TF +L GA A ++E
Sbjct: 239 VDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEE-- 296
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+Q+H+ I + + FV + ++D YSKC + + F M +++SW A+I G+
Sbjct: 297 -GKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYG 355
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+ EA+ +M +G P+ +T ++++ +++ ++E G Q HC + G +
Sbjct: 356 QNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYIT 415
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ +ALV +Y KCG + DA ++FD +S + VSW ++ GYAQ G +E ++++ M N
Sbjct: 416 VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANG 475
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+KP+ TFIGVLSAC GLVE+G YF+SM +DHGI P DH ++ L++ G+ + A
Sbjct: 476 LKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEA 535
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
EFIK P P+ W LLS C+ ++ +G++AAE +L TDP++ +++++L +++A
Sbjct: 536 EEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAK 595
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
W E A +R+ M+++ +KK+ GCSW + +NK+H FS + ++E + L+ +
Sbjct: 596 GQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655
Query: 656 FDGGYVPD 663
+ GY PD
Sbjct: 656 AEEGYKPD 663
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 234/482 (48%), Gaps = 40/482 (8%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR-L 66
PN+ T N LL + D ++LF MPER+ +S++ALI+GFS G P ++ +R L
Sbjct: 77 PNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRAL 136
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
+ + P T + ++ D G +H ++ R G + V + L++MY K GL
Sbjct: 137 LREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGL 196
Query: 127 LSSAQFVF-------------------------DAS------LERNSISWVSLLSSYCQC 155
+ A+ VF DA ++R+SI+W ++++ Q
Sbjct: 197 IRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQN 256
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G + L +F R GV I +++ S+L AC L L+ G QIH+ + + E + FV
Sbjct: 257 GLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVG 316
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L+++Y+KC + LA VF + ++ +W+A+I GY Q + EA+ F +M G+
Sbjct: 317 SALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK 376
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P + T V+ + A++ G Q H L + G + V+N ++ Y KC +E++ +
Sbjct: 377 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRL 436
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
FDEM HD VSW AL+ G+ E I+L + ML G P+ T+ +L+ S +
Sbjct: 437 FDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLV 496
Query: 396 EWGKQTHCCIVKPGFDSNVVI----GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNT 450
E G + K D +V + ++D+Y++ GR +A + + S + W T
Sbjct: 497 EKGCDYFDSMQK---DHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553
Query: 451 ML 452
+L
Sbjct: 554 LL 555
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 185/384 (48%), Gaps = 43/384 (11%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
V+ YN L+ ++ I DA+ LF M +R+ I+W+ +++G +Q G+ AL+ FR M
Sbjct: 211 TVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMR 270
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ + YT+ ++AC + GK+IH + R+ E N V + L++MY KC +
Sbjct: 271 AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIR 330
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ VF RN ISW +++ Y Q ++ F + G+ +F+ SV+ +CA
Sbjct: 331 LAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCA 390
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L +L+ G Q H L L V+ L+ LY KC ++ A R+F + D +W+A
Sbjct: 391 NLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTA 450
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
L+ GYAQ GKA E IDLF KM ++GL P VTF VL A
Sbjct: 451 LVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSAC-------------------- 490
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVS----WNALIAGHLASCHYGEA 363
S+ L+E+ FD M +H +V + +I + S + EA
Sbjct: 491 ---------------SRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEA 535
Query: 364 IELLKDMLFEGHCPNLYTYSNILN 387
E +K M H P+ + ++ +L+
Sbjct: 536 EEFIKQM---PHSPDAFGWATLLS 556
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 206/445 (46%), Gaps = 71/445 (15%)
Query: 181 ASVLGACAVLGN---LKVGMQIHSLVFKCALEFDK-FVAMGLINLYAKCEKLDLASRVFS 236
A++L + A G ++V +H L+ K L+ F+ L+ YAK +L A RVF
Sbjct: 13 AAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFD 72
Query: 237 NIQLPDL-------------------------------TAWSALIGGYAQLGKACEAIDL 265
+ P+L +++ALI G++ G ++ L
Sbjct: 73 EMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQL 132
Query: 266 FVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
+ + + P+ +T S ++ + + + G +H ++++GF ++ FV + ++D Y+
Sbjct: 133 YRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYA 192
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY------------------------ 360
K L+ ++ + F EM+ VV +N LI G L C
Sbjct: 193 KMGLIRDARRVFQEMEAKTVVMYNTLITG-LLRCKMIEDAKGLFQLMVDRDSITWTTMVT 251
Query: 361 --------GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
EA+++ + M EG + YT+ +IL + A+E GKQ H I + ++
Sbjct: 252 GLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYED 311
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
NV +GSALVDMY+KC + A VF ++ +N++SW M+VGY Q+ EA+ +S MQ
Sbjct: 312 NVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQ 371
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+ IKP+D T V+S+C ++ +EEG F+ + G+ + ++V L+ G
Sbjct: 372 MDGIKPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSI 430
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSG 557
A+ ++V W L++G
Sbjct: 431 EDAHRLFDEMSFH-DQVSWTALVTG 454
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 124/266 (46%), Gaps = 19/266 (7%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
+ NV + L+ MY K I A+ +F M RN+ISW+A+I G+ Q E A+ F
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFS 368
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M ++P+ +T +S+CA+ G + H SGL VSN L+ +YGKCG
Sbjct: 369 EMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ A +FD + +SW +L++ Y Q G+ + +F +G+ + VL
Sbjct: 429 SIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLS 488
Query: 186 ACAVLGNLKVG-------MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
AC+ G ++ G + H +V ++ D + M I+LY++ + A +
Sbjct: 489 ACSRAGLVEKGCDYFDSMQKDHGIV---PID-DHYTCM--IDLYSRSGRFKEAEEFIKQM 542
Query: 239 -QLPDLTAWSALIG-----GYAQLGK 258
PD W+ L+ G ++GK
Sbjct: 543 PHSPDAFGWATLLSSCRLRGNMEIGK 568
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG + N L+ +Y K I DA +LFDEM + +SW+AL++G++Q G + +
Sbjct: 406 LVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETI 465
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG--LELNSHVSNCLIN 119
+ F M+ L+P+ T++G +SAC+ G G + M + + ++ H + C+I+
Sbjct: 466 DLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYT-CMID 524
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+Y + G A +F+ ++ W +LLSS
Sbjct: 525 LYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 311/541 (57%), Gaps = 12/541 (2%)
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L A+ VFD +R+ ++W ++LS Y G H + L +F +GV +EF+ +SVL
Sbjct: 17 GALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVGPNEFTLSSVL 76
Query: 185 GAC---AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEK---LDLASRVFSNI 238
AC A G + +H++ + ++ +V LI YA CE+ ++ + ++F +
Sbjct: 77 TACRGGAADGGCEPS-SLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVEESRKLFDAL 135
Query: 239 QLPDLTA-WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
A W++++ GY++ G+ + LF M G+ S T S L A A + G
Sbjct: 136 GSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANLCVG 195
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+QLH L ++ F++ VAN+++D Y C L ++ + FDE+ E ++V+WN +IA + +
Sbjct: 196 QQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWY-SQ 254
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
C++ A++LL++M + PN +T ++I + + + ++ +G+Q H ++ + ++ +
Sbjct: 255 CNHLMALQLLREMNLQ---PNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDLQMC 311
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ALVDMY+KCG + +A+K+F+ + K+ +SW +M+ GY +G E++++++ M +
Sbjct: 312 NALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQLFTSMIHAGVH 371
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+ F+G++ AC H GLV+EGW++F SM ++ + P + V +L A G+ R A++
Sbjct: 372 PDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLARAGRLREAFD 431
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
I P P++ VW LL CK HK++ LGR AA KI+ +P+ +++L+N+YA N
Sbjct: 432 LIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIEINPDRAKTYVLLANIYAAGNK 491
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
W E A R++++ +K+ G SW ++ +K++ F+T+ + Q EV+ L+ H+ +
Sbjct: 492 WGEYADTRRLLRGIGSRKEAGTSWIDVTDKIYSFTTADSSSPQVSLADEVLQILARHMHE 551
Query: 658 G 658
Sbjct: 552 A 552
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 221/452 (48%), Gaps = 19/452 (4%)
Query: 26 INDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSA 85
+ A+ +FDEMP+R+V++W+A++SG++ G AL+ FR M+ + PN +T ++A
Sbjct: 19 LRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVGPNEFTLSSVLTA 78
Query: 86 CASRGDARSG----KEIHGRMYRSGLELNSHVSNCLINMYGKC--GL-LSSAQFVFDA-S 137
C RG A G +H R G++ +V N LI Y C G+ + ++ +FDA
Sbjct: 79 C--RGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVEESRKLFDALG 136
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
R + SW S+++ Y + G+ GL++F + G+ +S F+C+ L ACA + NL VG
Sbjct: 137 SGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANLCVGQ 196
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+H L + A + VA LI++Y C L A R+F I +L W+ +I Y+Q
Sbjct: 197 QLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWYSQ-- 254
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
C + + L P+ T + + A A + G+Q+H ++ + + N
Sbjct: 255 --CNHLMALQLLREMNLQPNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDLQMCN 312
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
++D YSKC + + K F+ MD D +SW ++I G+ + + E+I+L M+ G P
Sbjct: 313 ALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQLFTSMIHAGVHP 372
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKV 436
+ + ++ + ++ G + N I + ++ A+ GRL +A +
Sbjct: 373 DHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLARAGRLREAFDL 432
Query: 437 FDHLS-SKNLVSWNTMLVGYAQHG---LGREA 464
+ + + W +L H LGR A
Sbjct: 433 IHRMPFAPDETVWGALLGACKMHKNVELGRLA 464
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 192/411 (46%), Gaps = 24/411 (5%)
Query: 26 INDAQKLFDEMPE-RNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVS 84
+ +++KLFD + R SW+++++G+S+ G + L F+ M+ +E + +T A+
Sbjct: 125 VEESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALH 184
Query: 85 ACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSIS 144
ACAS + G+++H R N V+N LI+MY C L A+ +FD ERN ++
Sbjct: 185 ACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVT 244
Query: 145 WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVF 204
W ++++ Y QC H+ L++ R+ + + F+ S+ ACA L +L+ G Q+H
Sbjct: 245 WNTMIAWYSQC-NHLMALQLL---REMNLQPNCFTLTSITSACAGLASLRFGQQVHGAAL 300
Query: 205 KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
+ D + L+++Y+KC + A ++F+ + D +W+++I GY G A E+I
Sbjct: 301 RRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQ 360
Query: 265 LFVKMFSSGLMPSEVTFSYVL-----GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
LF M +G+ P V F ++ G D G S+ + + V
Sbjct: 361 LFTSMIHAGVHPDHVVFLGLICACNHGGLVDE----GWNFFRSMTSEYNLQPNKEIYGCV 416
Query: 320 LDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLK---DMLFEGH 375
+ ++ L E+ M D W AL L +C + +EL + + E +
Sbjct: 417 TNLLARAGRLREAFDLIHRMPFAPDETVWGAL----LGACKMHKNVELGRLAARKIIEIN 472
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
TY + NI + +WG+ + G S G++ +D+ K
Sbjct: 473 PDRAKTYVLLANIYA--AGNKWGEYADTRRLLRGIGSRKEAGTSWIDVTDK 521
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 6/253 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ F+ N+ N L+ MY + + DA++LFDE+PERN+++W+ +I+ +SQ +AL
Sbjct: 203 LRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWYSQCNHL-MAL 261
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
R M L+PN +T SACA R G+++HG R + + N L++MY
Sbjct: 262 QLLREM---NLQPNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDLQMCNALVDMY 318
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG +++A+ +F+ ++ +SW S+++ Y G +++F +GV
Sbjct: 319 SKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQLFTSMIHAGVHPDHVVFL 378
Query: 182 SVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++ AC G + G S+ + L+ +K + + NL A+ +L A + +
Sbjct: 379 GLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLARAGRLREAFDLIHRMPF 438
Query: 241 -PDLTAWSALIGG 252
PD T W AL+G
Sbjct: 439 APDETVWGALLGA 451
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ L+ G L AR VFD + +++V+W ML GYA +G AL+++ M +
Sbjct: 6 ATTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGV 65
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR--MDHIASVVH 524
PN+ T VL+AC G +G +S+ H ++ R +DH+ VV+
Sbjct: 66 GPNEFTLSSVLTACR--GGAADGGCEPSSL---HAVAVRRGVDHMPYVVN 110
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 178/583 (30%), Positives = 311/583 (53%), Gaps = 9/583 (1%)
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSHV--SNCLINMYGKCGLLSSAQFVFDASLERNSIS 144
A + + GK IH + + + + N LIN Y K +S A +FD ERN +S
Sbjct: 40 ADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVS 99
Query: 145 WVSLLSSYCQCGEHVHGLKIFLLSR----KSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
W +L++ Y G LK+ L + + V+ +E+ A + +C G ++ G Q H
Sbjct: 100 WSALMTGYLLNG---FSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCH 156
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
L+ K F +V L+++Y+KC + A V++ + + D+ A+++++ + G
Sbjct: 157 GLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLR 216
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
E +++ M S + +VTF A +K+ G +H ++ +V++ ++
Sbjct: 217 EGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAII 276
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
+ Y KC + FD + +VV W A++A + + EA+ L M E N +
Sbjct: 277 NMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEF 336
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
TY+ +LN + + A G H K GF +V++G+AL++MYAK G + A+KVF +
Sbjct: 337 TYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDM 396
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+++++WN M+ G++ HGLG++AL ++ M + PN TF GVLSAC H+GLV+EG+
Sbjct: 397 MHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGF 456
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKT 560
+Y + +++ G+ P ++H +V L + GQ A F++++P++ + V WR LL+ C
Sbjct: 457 YYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHV 516
Query: 561 HKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCS 620
H++ LGR+ AE +L DP D + +LSN+YA+ WD KVRK+M++K +KK+ G S
Sbjct: 517 HQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVS 576
Query: 621 WTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
W E+ N H F++ ++ + +L + GY PD
Sbjct: 577 WIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPD 619
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 155/547 (28%), Positives = 268/547 (48%), Gaps = 33/547 (6%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
++I N L+ Y K ++++ A LFD MPERNV+SWSAL++G+ G +L RL+
Sbjct: 65 SIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGF---SLKVIRLLK 121
Query: 69 CCVLE----PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ E PN Y A+S+C RG G++ HG + ++G +++V N L++MY KC
Sbjct: 122 DMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKC 181
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
++ A V++ + +++ S+LSS + G GL++ V + + +
Sbjct: 182 SIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAF 241
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
CA L +L++G+ +H + +E D +V+ +IN+Y KC K +A VF +Q ++
Sbjct: 242 SLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVV 301
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+A++ Q G EA++LF KM + +E T++ +L A A + G LH
Sbjct: 302 LWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHS 361
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG--- 361
K GF V N +++ Y+K +E + K F +M D+++WNA+I G H+G
Sbjct: 362 EKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGF---SHHGLGK 418
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSAL 420
+A+ + +DML PN T++ +L+ + ++ G H + + G + + +
Sbjct: 419 KALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCI 478
Query: 421 VDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVG---YAQHGLGREALEIYSMMQENKI 476
V + +K G+LN+AR K ++V+W T+L + +GLGR E M
Sbjct: 479 VSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMD---- 534
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWH---YFNSMIRDHGISPRMD----HIASVVHLFACR 529
PND +G + +I E+ W ++RD I I +V H+F
Sbjct: 535 -PND---VGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSE 590
Query: 530 GQTRRAY 536
Y
Sbjct: 591 DNKHPDY 597
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 202/404 (50%), Gaps = 13/404 (3%)
Query: 165 FLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHS--LVFKCALEFDKFVAMGLINLY 222
FLL + S +L A NLKVG IHS +V A E LIN Y
Sbjct: 17 FLLRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFY 76
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTF 281
AK ++ +A +F + ++ +WSAL+ GY G + + I L M S G + P+E
Sbjct: 77 AKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYIL 136
Query: 282 SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
+ + + D GRQ H L++K GFS +V N ++ YSKC ++++++ ++E+
Sbjct: 137 AIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPV 196
Query: 342 HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
+D+V++N++++ + + + E +E+L+ M+ E + T+ N ++ + + + G
Sbjct: 197 NDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHV 256
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H ++ + + + SA+++MY KCG+ AR VFD L S+N+V W ++ Q+G
Sbjct: 257 HGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCF 316
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
EAL ++S M++ +K N+ T+ +L+AC + G S++ H H
Sbjct: 317 EEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNG-----SLLHGHSEKSGFKHHVM 371
Query: 522 V----VHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
V ++++A G A + + S + + + W ++ G H
Sbjct: 372 VGNALINMYAKSGDIEAAKK-VFSDMMHRDIITWNAMICGFSHH 414
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 200/395 (50%), Gaps = 13/395 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GF + N L+ MY K S + DA +++E+P +++++++++S + G
Sbjct: 159 LLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREG 218
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L R MV ++ + T+V A S CAS D R G +HG+M S +E +++VS+ +INM
Sbjct: 219 LEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINM 278
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG A+ VFD RN + W ++++S Q G L +F + V +EF+
Sbjct: 279 YGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTY 338
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A +L ACA L + G +H K + V LIN+YAK ++ A +VFS++
Sbjct: 339 AVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMH 398
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL---GAFADVKETIGG 297
D+ W+A+I G++ G +A+ +F M ++ P+ VTF+ VL G V+E G
Sbjct: 399 RDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQE--GF 456
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLA 356
LH L+ + G ++ SK L E+ + DVV+W L L
Sbjct: 457 YYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTL----LN 512
Query: 357 SCHYGEAIEL---LKDMLFEGHCPNLYTYSNILNI 388
+CH + L + + + E ++ TY+ + NI
Sbjct: 513 ACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNI 547
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 196/654 (29%), Positives = 347/654 (53%), Gaps = 26/654 (3%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+++ +N + +++ + + A +LF+ MP R+ ISW+A+ISG +A F M
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMP 107
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
L ++ +S C + R+ + + +M E + N +++ Y + G +
Sbjct: 108 TRDL----VSWNVMISGCVRYRNLRAARLLFDQM----PERDVVSWNAMLSGYAQNGYVK 159
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ +FD +NSISW +L++Y Q G ++F K+ + ++C ++G
Sbjct: 160 EAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLF--ESKADWELISWNC--MMG--- 212
Query: 189 VLGNLKVGMQIHSL-VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
G +K + + +F E D+ +I+ YA+ +L A R+F + D+ W+
Sbjct: 213 --GYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWT 270
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A++ GY Q G EA +F M + V+++ ++ + K R+L +
Sbjct: 271 AMVSGYVQNGMLDEARRVFDGMPEK----NSVSWNAIIAGYVQCKRMDQARELFEAMPCQ 326
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
SS+ NT++ Y++ + ++ FD M + D +SW A+IAG+ S + EA+ L
Sbjct: 327 NVSSW----NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLF 382
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+M +G N T+++ L+ ++I A+E GKQ H +VK G +S +G+AL+ MY KC
Sbjct: 383 VEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKC 442
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G ++DA VF+ + K +VSWNTM+ GYA+HG G+EAL ++ M++ I P+D T +GVL
Sbjct: 443 GNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVL 502
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC H GLV++G YF SM +D+GI+ H ++ L G+ A +K+ P EP+
Sbjct: 503 SACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPD 562
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
W LL + H + LG AA+ I +P+++ +++LSN+YA + W + ++R
Sbjct: 563 AATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLR 622
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
M+++ +KK G SW E+QNK+H F+ + ++ + +L + + GYV
Sbjct: 623 MRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYV 676
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G N LL+MY K I+DA +F+ + E+ V+SW+ +I+G+++ G + A
Sbjct: 420 VVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEA 479
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L F M + P+ T VG +SAC+ G G E M + G+ NS C+I+
Sbjct: 480 LMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMID 539
Query: 120 MYGKCGLLSSAQ-FVFDASLERNSISWVSLLSSYCQCGEHVHG 161
+ G+ G L AQ + + E ++ +W +LL + +HG
Sbjct: 540 LLGRAGRLDDAQNLMKNMPFEPDAATWGALLGA-----SRIHG 577
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 201/690 (29%), Positives = 339/690 (49%), Gaps = 49/690 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER----NVISWSALISGFSQIGM 56
M G P++I+++ LL + + I+ A + +EMPER V SW+ +ISG Q G
Sbjct: 275 MQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGY 334
Query: 57 PEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
E AL+ F M+ +PN T + AC R GK IH + G+ N +V
Sbjct: 335 LEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGS 394
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+I+MY KCG A+ VF + +N+ W ++++Y G+ L + +K G
Sbjct: 395 VIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPD 454
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+ ++L G+ + G++ + + V MGL
Sbjct: 455 VITYNTILS-----GHARNGLKTQAXEL-----LSEMVQMGL------------------ 486
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG------------LMPSEVTFSYV 284
P++ +++ LI G+ Q G + EA+ +F M S + P+ +T +
Sbjct: 487 ---KPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGA 543
Query: 285 LGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDV 344
L A AD+ G+++H ++ GF FV++ ++D Y+KC ++ + K F +D +
Sbjct: 544 LPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNT 603
Query: 345 VSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCC 404
VSWNAL+AG++ + EA++L +ML EG P+ T+ + DI AI +G+ H
Sbjct: 604 VSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGY 663
Query: 405 IVKPGFDS-NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGRE 463
K D I SAL+DMYAKCG + DA+ VFD K++ WN M+ ++ HG+ R
Sbjct: 664 AAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARN 723
Query: 464 ALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVV 523
A ++ M+ I P+ TF+ +LSAC GLVEEGW YFNSM +G++ ++H +V
Sbjct: 724 AFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMV 783
Query: 524 HLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTS 583
+ G A +FI+ P P+ +W LL C+ H + +G AA+ + +P++ +
Sbjct: 784 GILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNAT 843
Query: 584 AHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGID 643
+++LSN+Y + MWD +R M+ + L CS+ + + F + + +
Sbjct: 844 NYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHXCTFKGGESSHPELEE 903
Query: 644 LHEVMNQLSVHLFDGGYVP-DPIYSSHFEE 672
+ E + L+ + GY P DP++ +E
Sbjct: 904 ILETWDXLARKMELSGYFPLDPVFDDEEKE 933
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 142/563 (25%), Positives = 247/563 (43%), Gaps = 79/563 (14%)
Query: 14 NHLLLMYVKFS-RINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVL 72
N L+++Y K + DA+KL DE+P R V +++ALI + + + + FRLMV +
Sbjct: 120 NKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGM 179
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P+ Y + AC++ R GK +HG + R +E + V N LI+ Y CG L S++
Sbjct: 180 LPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRS 239
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VF + ER+ +SW +L+S+Y + G IF L + GV S +++L A G
Sbjct: 240 VFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGE 299
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+ + ++ ++ GL P + +W+ +I G
Sbjct: 300 IDLALET----------LEEMPERGL---------------------QPTVNSWNGIISG 328
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Q G +A+D+F +M P+ +T + +L A +K G+ +H + K G
Sbjct: 329 CVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGN 388
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+V +V+D YSKC + + K F + + + WN +IA ++ +A+ LL+ M
Sbjct: 389 VYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQK 448
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+G P++ TY+ IL+ + + +V+ G NVV
Sbjct: 449 DGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVV----------------- 491
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN------------KIKPND 480
S+N ++ G+ Q GL EAL+++ +MQ ++PN
Sbjct: 492 --------------SFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNP 537
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFI 539
T G L AC + L +G +R+ G P + +++V ++A C F
Sbjct: 538 ITITGALPACADLNLWCQGKEIHGYTLRN-GFEPNIFVSSALVDMYAKCHDMDSANKVFF 596
Query: 540 KSSPIEPNKVVWRCLLSGCKTHK 562
+ N V W L++G +K
Sbjct: 597 RID--GRNTVSWNALMAGYINNK 617
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/566 (23%), Positives = 238/566 (42%), Gaps = 61/566 (10%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +V N L+ Y + ++ +F M ER+V+SW+ALIS + + G+ + A
Sbjct: 209 VIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEA 268
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F LM ++P+ ++ +S A G+ E M GL+ +
Sbjct: 269 KHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVN-------- 320
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
SW ++S Q G L +F + +
Sbjct: 321 -----------------------SWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITI 357
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L AC L L++G IH + K + + +V +I++Y+KC D A +VF +
Sbjct: 358 ASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAEN 417
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ W+ +I Y GK +A+ L M G P +T++ +L A +L
Sbjct: 418 KNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXEL 477
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
S +++MG N ++ + + L E+LK F M C+
Sbjct: 478 LSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPS------------DGCNP 525
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
E + L PN T + L +D+ GK+ H ++ GF+ N+ + SAL
Sbjct: 526 NEVLNL-------SMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSAL 578
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
VDMYAKC ++ A KVF + +N VSWN ++ GY + EAL+++ M ++P+
Sbjct: 579 VDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSS 638
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI-----ASVVHLFACRGQTRRA 535
TF+ + AC I + F + + ++D + ++++ ++A G A
Sbjct: 639 ITFMILFPACGDIAAIR-----FGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDA 693
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTH 561
S +E + +W ++S H
Sbjct: 694 KSVFDSE-VEKDVPLWNAMISAFSVH 718
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 146/311 (46%), Gaps = 14/311 (4%)
Query: 298 RQLHSLIIKMGFSSF-TFVANTVLDFYSKCEL-LEESLKTFDEMDEHDVVSWNALIAGHL 355
RQ+H+ ++K+ + + + N ++ Y K + LE++ K DE+ V ++ ALI +
Sbjct: 100 RQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYC 159
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
S + E + M++EG P+ Y IL S + GK H +++ +S+V
Sbjct: 160 RSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVF 219
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+G+AL+ Y+ CG L +R VF + +++VSW ++ Y + GL EA I+ +MQ +
Sbjct: 220 VGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDG 279
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+KP+ ++ +LS G ++ M + G+ P ++ ++ G A
Sbjct: 280 VKPDLISWSALLSGFARNGEIDLALETLEEM-PERGLQPTVNSWNGIISGCVQNGYLEDA 338
Query: 536 YEFIKSS---PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
+ P +PN + +L C K L LG+ A I H ++ NVY
Sbjct: 339 LDMFSRMLWYPEDPNIITIASILPACTGLKALRLGK-AIHXI-------AXKHGIVGNVY 390
Query: 593 AEANMWDETAK 603
E ++ D +K
Sbjct: 391 VEGSVIDMYSK 401
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 174/504 (34%), Positives = 279/504 (55%)
Query: 160 HGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI 219
+ L +F + V +F+ +SVL AC+ + L+ G Q+H+L+ K + ++FV LI
Sbjct: 104 NALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLI 163
Query: 220 NLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEV 279
+YA C ++ +A VF + + AW++++ GY + G E + LF K+ + +V
Sbjct: 164 QMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDV 223
Query: 280 TFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
T VL A + G + I+ G + +++D Y+KC ++ + K FDEM
Sbjct: 224 TMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEM 283
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGK 399
D+ DVV+W+A+I+G+ + EA+ L +M PN T ++L + + A E GK
Sbjct: 284 DKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGK 343
Query: 400 QTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
H I K V +G+ L+D YAKCG ++ + +VF +S KN+ +W ++ G A +G
Sbjct: 344 WVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNG 403
Query: 460 LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
G+ ALE +S M EN +KPND TFIGVLSAC H LV++G H FNSM RD I PR++H
Sbjct: 404 EGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHY 463
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP 579
+V + G AY+FI + P PN VVWR LL+ C+ HK++ + + E I +P
Sbjct: 464 GCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEP 523
Query: 580 EDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQF 639
+ +I+LSN YA ++ +VR ++KEK +KK GCS EL +H F +
Sbjct: 524 AHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHK 583
Query: 640 QGIDLHEVMNQLSVHLFDGGYVPD 663
++H+ ++++ + GYVP+
Sbjct: 584 HSKEIHDALDKMMKQIKRLGYVPN 607
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/522 (27%), Positives = 246/522 (47%), Gaps = 40/522 (7%)
Query: 26 INDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSA 85
I+ A +F+ + + +++ +I G + P+ AL F+ M ++ + +T+ + A
Sbjct: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
C+ R G+++H + +SG + N V N LI MY CG + A+ VFD ER+ ++W
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
S+LS Y + G +K+F + + + + SVL AC L NL++G I +
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
L + + LI++YAKC ++D A ++F + D+ AWSA+I GYAQ + EA++L
Sbjct: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNL 310
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F +M + P+EVT VL + A + G+ +H I K + ++DFY+K
Sbjct: 311 FHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAK 370
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE-AIELLKDMLFEGHCPNLYTYSN 384
C ++ S++ F EM +V +W ALI G LA+ G+ A+E ML PN T+
Sbjct: 371 CGYIDRSVEVFKEMSFKNVFTWTALIQG-LANNGEGKMALEFFSSMLENDVKPNDVTFIG 429
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--SALVDMYAKCGRLNDARKVFDHLS- 441
+L+ S ++ G+ + + FD I +VD+ + G L +A + D++
Sbjct: 430 VLSACSHACLVDQGRHLFNSM-RRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPF 488
Query: 442 SKNLVSWNTMLVG----------------------------------YAQHGLGREALEI 467
N V W T+L YA G +A+ +
Sbjct: 489 PPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRV 548
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD 509
S+++E +IK + L VH E+G H + I D
Sbjct: 549 RSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHD 590
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 194/378 (51%), Gaps = 9/378 (2%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC--EKLDLASRVFSNIQL 240
+L C +L+ Q+H+ + K D + ++ A + +D A +F++I
Sbjct: 27 ILQQCKTPKDLQ---QVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDK 83
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
P+ +A++ +I G A A+ LF KM + + TFS VL A + +K G Q+
Sbjct: 84 PESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQV 143
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+LI+K GF S FV NT++ Y+ C + + FD M E +V+WN++++G+ + +
Sbjct: 144 HALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLW 203
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
E ++L + +L + T ++L + +E G+ IV G N + ++L
Sbjct: 204 DEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSL 263
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMYAKCG+++ ARK+FD + +++V+W+ M+ GYAQ +EAL ++ MQ+ + PN+
Sbjct: 264 IDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNE 323
Query: 481 NTFIGVLSACVHIGLVEEG-WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
T + VL +C +G E G W +F I+ + + ++ +A G R+ E
Sbjct: 324 VTMVSVLYSCAMLGAYETGKWVHF--YIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVF 381
Query: 540 KSSPIEPNKVVWRCLLSG 557
K + N W L+ G
Sbjct: 382 KEMSFK-NVFTWTALIQG 398
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 189/373 (50%), Gaps = 6/373 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF N N L+ MY +I A+ +FD MPER++++W++++SG+++ G+ +
Sbjct: 147 ILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEV 206
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ FR ++ +E + T + + AC + G+ I + GL N+ ++ LI+M
Sbjct: 207 VKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDM 266
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + +A+ +FD +R+ ++W +++S Y Q L +F +K V +E +
Sbjct: 267 YAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTM 326
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL +CA+LG + G +H + K ++ + LI+ YAKC +D + VF +
Sbjct: 327 VSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSF 386
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+ALI G A G+ A++ F M + + P++VTF VL A + GR L
Sbjct: 387 KNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHL 446
Query: 301 -HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASC 358
+S+ ++D + LEE+ + D M + V W L LASC
Sbjct: 447 FNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTL----LASC 502
Query: 359 HYGEAIELLKDML 371
+ IE+ + L
Sbjct: 503 RAHKNIEMAEKSL 515
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 178/608 (29%), Positives = 323/608 (53%), Gaps = 4/608 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
LL MY K +N A +F +MP RN++SW+++ISG+ G+ E +++ F M +P+
Sbjct: 398 LLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPD 457
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
+ V +SAC+ GK H +R + N ++SN L+ Y CG LSS+ +F
Sbjct: 458 AISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQ 517
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
RN+ISW +L+S G+ + + ++ + + + S++ C V NL
Sbjct: 518 KMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQ 577
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
GM +H K D + LI++Y C ++ +F + + +W+ALI GY
Sbjct: 578 GMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRF 637
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
E + F +M G P+ VT +L + + G+ +H+ ++ G T +
Sbjct: 638 HYLQNEVMASFCQMIREGQKPNYVT---LLNLLPSCRTLLQGKSIHAFAVRTGVIVETPI 694
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
+++ Y++ E + + F+ + D+ WNA+++ ++ + + E++ ++L
Sbjct: 695 ITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARV 754
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+ T+ ++++ + ++ +++ GFD ++VI +AL+D++A+CG ++ A+K
Sbjct: 755 EPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKK 814
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+F+ LSSK+ VSW+TM+ GY HG AL + S M+ + +KP+ T+ VLSAC H G
Sbjct: 815 IFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGF 874
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+++GW FNSM+ + G+ RM+H A +V L GQ AY+F++ P +P+ + LL
Sbjct: 875 IDQGWMIFNSMV-EEGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLL 933
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
C H ++ LG + + DP+++ +++ML N+YA A W + +VR M+E+ L+K
Sbjct: 934 GACIIHGNVKLGEKISSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRK 993
Query: 616 DTGCSWTE 623
G S E
Sbjct: 994 IPGFSLVE 1001
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 170/656 (25%), Positives = 301/656 (45%), Gaps = 34/656 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ + F N++ L+ Y K R+ A+ + D++ + ++++W+ALISG+S G +
Sbjct: 181 VLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEV 240
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
R + L+PN T+ + C GK IHG + +SG + ++ LI+M
Sbjct: 241 FEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISM 300
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G L A+ +FD++ E+N + W S++S+Y Q + K+F K+ + + +
Sbjct: 301 YAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTF 360
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S++ C N G +H+ V K L+ VA L+++YAK L+ A +F +
Sbjct: 361 VSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPR 420
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L +W+++I GY G ++D F M G P ++ +L A + ++ + G+
Sbjct: 421 RNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAA 480
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ + F S ++N +L FYS C L S K F +M + +SWN LI+G + +
Sbjct: 481 HAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDT 540
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A+ LL M E +L T +I+ I + G H +K GF +V + +AL
Sbjct: 541 KKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNAL 600
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MY CG +N + +F+ + +++VSWN ++ GY H L E + + M KPN
Sbjct: 601 ISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNY 660
Query: 481 NTFIGVLSAC--------VHIGLVEEGWHYFNSMIRDH-GISPRMDHIASVVHLFACRG- 530
T + +L +C +H V G +I + R ++I S + LF G
Sbjct: 661 VTLLNLLPSCRTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGK 720
Query: 531 --------------QTRRAYEFIK------SSPIEPNKVVWRCLLSGCKTHKDLVLGRYA 570
QT+ A E + + +EP+ + + L+S C L L
Sbjct: 721 EDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSV 780
Query: 571 AEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
++ + HI++SN + + K + E KD SW+ + N
Sbjct: 781 MAYVIQ---KGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKD-AVSWSTMIN 832
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 212/414 (51%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
+T+ + AC + G + +H + R+ E N + L++ Y K G + A+ V D
Sbjct: 156 FTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDK 215
Query: 137 SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
+ + ++W +L+S Y G ++ + G+ + + AS++ C + L +G
Sbjct: 216 ISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIG 275
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
IH V K D+F+ LI++YA L +A +F + ++ W+++I YAQ
Sbjct: 276 KSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQN 335
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
K+ EA +F +M + + P+ VTF ++ + G+ LH+ ++K S VA
Sbjct: 336 QKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVA 395
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
+L Y+K L + F +M +++SWN++I+G+ + + +++ DM FEG
Sbjct: 396 TALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFD 455
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ + NIL+ S + AI GK H + FDSN+ I +AL+ Y+ CG+L+ + K+
Sbjct: 456 PDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKL 515
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
F + +N +SWNT++ G +G ++A+ + MQ+ K++ + T I ++ C
Sbjct: 516 FQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPIC 569
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 207/418 (49%), Gaps = 6/418 (1%)
Query: 148 LLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
++ C G L ++L R G +F+ V+ AC LG + + +H +V + +
Sbjct: 126 MIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLRTS 185
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
E + + L++ YAK ++ A V I PDL W+ALI GY+ G E ++
Sbjct: 186 FEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLR 245
Query: 268 KMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
++ GL P+ TF+ ++ +K G+ +H ++K GFSS F+ ++ Y+
Sbjct: 246 QINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGG 305
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
L + FD E +VV WN++I+ + + EA ++ + ML PN+ T+ +I+
Sbjct: 306 NLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIP 365
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ +GK H ++K DS + + +AL+ MYAK G LN A +F + +NL+S
Sbjct: 366 CCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLS 425
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG--LVEEGWHYFNS 505
WN+M+ GY +GL +++ + MQ P+ + + +LSAC + L+ + H F+
Sbjct: 426 WNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFS- 484
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
R ++ +++ ++ G+ +++ + P+ N + W L+SGC + D
Sbjct: 485 -FRKE-FDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLR-NAISWNTLISGCVHNGD 539
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 165/333 (49%), Gaps = 10/333 (3%)
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
+LA F I+ P + + +I G + + +++K G + TF +V+ A
Sbjct: 106 ELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKAC 165
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
+ +H ++++ F + ++DFY+K + ++ D++ + D+V+WN
Sbjct: 166 TALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWN 225
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
ALI+G+ + E E+L+ + G PN+ T+++I+ + + + ++ GK H +VK
Sbjct: 226 ALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKS 285
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
GF S+ + AL+ MYA G L AR +FD + KN+V WN+M+ YAQ+ EA +++
Sbjct: 286 GFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMF 345
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASV----VH 524
M + ++PN TF+ ++ C + ++ + H + R+D SV +
Sbjct: 346 QQMLKANMQPNVVTFVSIIPCCEN-----SANFWYGKSLHAHVMKYRLDSQLSVATALLS 400
Query: 525 LFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++A G A +FI N + W ++SG
Sbjct: 401 MYAKLGDLNSA-DFIFYQMPRRNLLSWNSMISG 432
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 37/240 (15%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +++ N L+ ++ + I+ A+K+F+ + ++ +SWS +I+G+ G E A
Sbjct: 784 VIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAA 843
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M ++P+ TY +SAC+ G G I M G+ C++++
Sbjct: 844 LALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRRMEHYACMVDL 903
Query: 121 YGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
G+ G L+ A FV E+ L K V++ E
Sbjct: 904 LGRTGQLNEAYDFV-----EK--------------------------LPCKPSVSLLE-- 930
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+LGAC + GN+K+G +I SL+F+ + M L N+YA + A+RV S+++
Sbjct: 931 --SLLGACIIHGNVKLGEKISSLLFELDPKNSGSYVM-LYNIYAAAGRWMDANRVRSDME 987
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/525 (34%), Positives = 291/525 (55%), Gaps = 1/525 (0%)
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
R++ S+ L+ S+ + G L +F+ + + V+ + + A+ + +C+ + +L VG
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+ + FK D+FV LI++YA C + A +F +Q+ + AW+A+I GY + G
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGD 252
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
E +++F M EVT V A + + G+ + + G +A
Sbjct: 253 WKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATA 312
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
++D Y+KC L+++ + FD M DVV+W+A+I+G+ S EA+ + +M PN
Sbjct: 313 LVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPN 372
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T ++L+ + + A+E GK H I + V++G+ALVD YAKCG + DA K F+
Sbjct: 373 DVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFE 432
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+ +N +W ++ G A +G REALE++S M E I+P D TFIGVL AC H LVEE
Sbjct: 433 SMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEE 492
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
G +F SM +D+GI PR++H +V L G AY+FI++ PIEPN VVWR LLS C
Sbjct: 493 GRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSAC 552
Query: 559 KTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTG 618
HK++ +G A ++I+ DP + +I+LSN YA W A VRK MKEK ++K G
Sbjct: 553 TVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPG 612
Query: 619 CSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
CS EL+ + F Q +++E ++++ ++ GY+P+
Sbjct: 613 CSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPN 657
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 213/436 (48%), Gaps = 6/436 (1%)
Query: 37 PERNVISWSALISGFSQIGMPEVALNYFRLMVC-CVLEPNYYTYVGAVSACASRGDARSG 95
P R+ S++ LI F + G PE AL+ F M+ + P+ +T V +C+ D G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
+ + ++ G ++ V N LI+MY CG + +A +F + I+W ++++ Y +
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G+ +++F + E + SV AC LG+ +G I + + + +A
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L+++YAKC +LD A R+F + D+ AWSA+I GY Q + EA+ +F +M + +
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P++VT VL A A + G+ +HS I + + ++DFY+KC +++++K
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKA 430
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F+ M + +W ALI G ++ EA+EL ML P T+ +L S +
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLV 490
Query: 396 EWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLV 453
E G++ + + G + +VD+ + G +++A + ++ N V W +L
Sbjct: 491 EEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLS 550
Query: 454 GYAQHG---LGREALE 466
H +G EAL+
Sbjct: 551 ACTVHKNVEIGEEALK 566
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 184/371 (49%), Gaps = 10/371 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N L+ MY + A LF + + VI+W+A+I+G+ + G + + F
Sbjct: 201 GFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMF 260
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M+ + T + +AC GDA G+ I G+ + +++ L++MY KC
Sbjct: 261 KGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKC 320
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L A+ +FD R+ ++W +++S Y Q L IF + + V ++ + SVL
Sbjct: 321 GELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVL 380
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACAVLG L+ G +HS + + L + L++ YAKC + A + F ++ + +
Sbjct: 381 SACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTW 440
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD---VKETIGGRQLH 301
W+ALI G A G++ EA++LF M + + P++VTF VL A + V+E G R
Sbjct: 441 TWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEE--GRRHFT 498
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHY 360
S+ G ++D + L++E+ + M E + V W AL L++C
Sbjct: 499 SMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRAL----LSACTV 554
Query: 361 GEAIELLKDML 371
+ +E+ ++ L
Sbjct: 555 HKNVEIGEEAL 565
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/571 (31%), Positives = 300/571 (52%), Gaps = 4/571 (0%)
Query: 97 EIHGRMYRSG-LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
++H + G L N++++ L Y CG + AQ +FD + +NS W S++ Y
Sbjct: 43 QLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACN 102
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
L ++L G F+ VL AC L ++G ++H+LV LE D +V
Sbjct: 103 NSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVG 162
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
++++Y K ++ A VF + + DLT+W+ ++ G+ + G+A A ++F M G +
Sbjct: 163 NSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFV 222
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT---FVANTVLDFYSKCELLEES 332
T +L A DV + G+++H +++ G S F+ N+++D Y CE + +
Sbjct: 223 GDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCA 282
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
K F+ + DVVSWN+LI+G+ +A+EL M+ G P+ T ++L + I
Sbjct: 283 RKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQI 342
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
A+ G +VK G+ NVV+G+AL+ MYA CG L A +VFD + KNL + M+
Sbjct: 343 SALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMV 402
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
G+ HG GREA+ I+ M + P++ F VLSAC H GLV+EG F M RD+ +
Sbjct: 403 TGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSV 462
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
PR H + +V L G AY I++ ++PN+ VW LLS C+ H+++ L +A+
Sbjct: 463 EPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQ 522
Query: 573 KILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
K+ +P+ S ++ LSN+YA W++ VR ++ ++ L+K S+ EL +H F
Sbjct: 523 KLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFF 582
Query: 633 TSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ Q D++ + L+ L GY PD
Sbjct: 583 VGDTSHEQSDDIYAKLKDLNEQLKKAGYKPD 613
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 226/466 (48%), Gaps = 38/466 (8%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
AQ +FD++ +N W+++I G++ P AL + M+ +P+ +TY + AC
Sbjct: 77 AQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGD 136
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
G+++H + GLE + +V N +++MY K G + +A+ VFD L R+ SW ++
Sbjct: 137 LLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTM 196
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK--- 205
+S + + GE ++F R+ G + ++L AC + +LKVG +IH V +
Sbjct: 197 MSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGE 256
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
+ F+ +I++Y CE + A ++F +++ D+ +W++LI GY + G A +A++L
Sbjct: 257 SGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALEL 316
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F +M G +P EVT VL A + G + S ++K G+ V ++ Y+
Sbjct: 317 FGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYAN 376
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C L + + FDEM E ++ + ++ G EAI + +ML +G P+ ++ +
Sbjct: 377 CGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAV 436
Query: 386 LNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
L+ S ++ GK+ + + + S LVD+ + G L++A
Sbjct: 437 LSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEA----------- 485
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
Y++++ K+KPN++ + +LSAC
Sbjct: 486 -----------------------YAVIENMKLKPNEDVWTALLSAC 508
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 145/290 (50%), Gaps = 3/290 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V N +L MY KF + A+ +FD M R++ SW+ ++SGF + G A
Sbjct: 150 VVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGA 209
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR---SGLELNSHVSNCL 117
F M + T + +SAC D + GKEIHG + R SG N + N +
Sbjct: 210 FEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSI 269
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
I+MY C +S A+ +F+ ++ +SW SL+S Y +CG+ L++F G E
Sbjct: 270 IDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDE 329
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ SVL AC + L++G + S V K + V LI +YA C L A RVF
Sbjct: 330 VTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDE 389
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ +L A + ++ G+ G+ EAI +F +M G+ P E F+ VL A
Sbjct: 390 MPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSA 439
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 2/249 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG N N ++ MY ++ A+KLF+ + ++V+SW++LISG+ + G AL
Sbjct: 257 SGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALEL 316
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F MV P+ T + ++AC R G + + + G +N V LI MY
Sbjct: 317 FGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYAN 376
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG L A VFD E+N + +++ + G + IF GV E +V
Sbjct: 377 CGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAV 436
Query: 184 LGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-P 241
L AC+ G + G +I + + ++E L++L + LD A V N++L P
Sbjct: 437 LSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKP 496
Query: 242 DLTAWSALI 250
+ W+AL+
Sbjct: 497 NEDVWTALL 505
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ NV+ L+ MY + A ++FDEMPE+N+ + + +++GF G A
Sbjct: 355 VVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREA 414
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
++ F M+ + P+ + +SAC+ G GKEI +M R +E +CL++
Sbjct: 415 ISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVD 474
Query: 120 MYGKCGLLSSAQFVFD-ASLERNSISWVSLLSS 151
+ G+ G L A V + L+ N W +LLS+
Sbjct: 475 LLGRAGYLDEAYAVIENMKLKPNEDVWTALLSA 507
>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/626 (30%), Positives = 321/626 (51%), Gaps = 1/626 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+IT+ + + L+ Y + +A+K+FDE+P+ + +A+++G+ Q
Sbjct: 80 IITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDC 139
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ ++M C LE + YT A+ AC D G E+ G GL + + ++N
Sbjct: 140 IELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNF 199
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
K G + AQF F +E++ + W ++ + Q G G +FL + + S +
Sbjct: 200 LVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTM 259
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S++ +C + NL G +H V + D V LI++Y K ++ A +F N+
Sbjct: 260 ISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPS 319
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L +W+ +I GY Q G E + LF K+ + T ++ + + GG+ L
Sbjct: 320 RNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKIL 379
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H I + G + ++D Y+KC L + F+ M +V+SW A++ G + H
Sbjct: 380 HGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHA 439
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A++L M E N T +++ + + + G+ H + + F S VV+ +AL
Sbjct: 440 RDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTAL 499
Query: 421 VDMYAKCGRLNDARKVFDH-LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
+DMYAKC ++N A VF + L+ K+++ +N+M+ GY HGLG +AL +Y M ++PN
Sbjct: 500 IDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPN 559
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
++TF+ +LSAC H GLVEEG F +M++DH +P A +V L + G+ R+A E I
Sbjct: 560 ESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELI 619
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
P P + LL+GC HKD+ LG A+++LS + + S +I LSN+YA+A+ WD
Sbjct: 620 NQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRWD 679
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQ 625
VR +M E+ +KK G S E+
Sbjct: 680 SVKYVRGLMMEQEIKKIPGYSSIEVN 705
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 317/589 (53%), Gaps = 3/589 (0%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y ++ C ++ + K +H + +SG L S + LI+ Y KC +++ A+ +FD
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMP 62
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
R+ ++W S++SS+ G+ ++++ GV ++ +++ A + +G + G +
Sbjct: 63 NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122
Query: 199 IHSLVFKCALEF-DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
H L E D FVA G++++YAK K+ A VF + D+ ++ALI GY Q G
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHG 182
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
EA+++F M S + P+E T + VL + ++ + + G+ +H L++K G S
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQT 242
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
++L YSKC ++E+S+K F+ + V+W + I G + + A+ + ++M+ P
Sbjct: 243 SLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISP 302
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
N +T S+IL+ S + +E G+Q H VK G D N + +AL+ +Y KCG + AR VF
Sbjct: 303 NHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVF 362
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVE 497
D L+ ++VS NTM+ YAQ+G G EALE++ +++ ++PN TFI +L AC + GLVE
Sbjct: 363 DSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVE 422
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
EG F+ + +H I DH ++ L + A I+ P+ + WR LL+
Sbjct: 423 EGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNA 481
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
CK H ++ + +K+L P D HI+L+N+YA A WD +++ ++ LKK
Sbjct: 482 CKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTP 541
Query: 618 GCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIY 666
SW ++ ++H F + + ++ E++++L + GY PD +
Sbjct: 542 AMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKF 590
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 228/442 (51%), Gaps = 2/442 (0%)
Query: 20 YVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTY 79
Y+K S I +A+KLFDEMP R++++W+++IS G + A+ + M+ + P+ YT+
Sbjct: 45 YIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTF 104
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLEL-NSHVSNCLINMYGKCGLLSSAQFVFDASL 138
A + G +R G++ HG G E+ + V+ +++MY K G + A+FVFD L
Sbjct: 105 SAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVL 164
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
+++ + + +L+ Y Q G L++F S + +E++ ASVL +C LG+L G
Sbjct: 165 DKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKL 224
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
IH LV K LE L+ +Y+KC ++ + +VF+++ W++ I G Q G+
Sbjct: 225 IHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGR 284
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
A+ +F +M + P+ T S +L A + + G Q+H++ +K+G FV
Sbjct: 285 EEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAA 344
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
++ Y KC +E++ FD + E D+VS N +I + + EA+EL + + G PN
Sbjct: 345 LIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPN 404
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+ T+ +IL ++ +E G Q I + + ++D+ + R +A +
Sbjct: 405 VVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLI 464
Query: 438 DHLSSKNLVSWNTMLVGYAQHG 459
+ + +++ W T+L HG
Sbjct: 465 EEGKNPDVIQWRTLLNACKIHG 486
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 180/338 (53%), Gaps = 9/338 (2%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY KF ++ DA+ +FD + +++V+ ++ALI G++Q G+ AL F MV ++PN YT
Sbjct: 146 MYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYT 205
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
+ +C + GD +GK IHG + + GLE L+ MY KC ++ + VF++
Sbjct: 206 LASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLA 265
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
+ ++W S + Q G L +F + ++ + F+ +S+L AC+ L L+ G Q
Sbjct: 266 YASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQ 325
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
IH++ K ++ +KFV LI+LY KC ++ A VF ++ D+ + + +I YAQ G
Sbjct: 326 IHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGF 385
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI-----IKMGFSSFT 313
EA++LF ++ GL P+ VTF +L A + G Q+ SLI I++ +T
Sbjct: 386 GHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYT 445
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
++D + + EE+ +E DV+ W L+
Sbjct: 446 ----CMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLL 479
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 5/253 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G V + LL MY K + + D+ K+F+ + + ++W++ I G Q G EVA
Sbjct: 229 VVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVA 288
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ FR M+ C + PN++T + AC+S +G++IH + G++ N V LI++
Sbjct: 289 LSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHL 348
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG + A+ VFD+ E + +S +++ +Y Q G L++F +K G+ + +
Sbjct: 349 YGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTF 408
Query: 181 ASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
S+L AC G ++ G QI SL+ L D + M I+L + ++ + A+ +
Sbjct: 409 ISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCM--IDLLGRAKRFEEATMLIEE 466
Query: 238 IQLPDLTAWSALI 250
+ PD+ W L+
Sbjct: 467 GKNPDVIQWRTLL 479
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/570 (31%), Positives = 304/570 (53%), Gaps = 5/570 (0%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYG--KCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
K+IH +M R+ L ++ ++ ++ G L A+ VF+ + + S++ Y
Sbjct: 57 KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYT 116
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
+ + L G+ F+ S+ +C VL G Q+H K D +
Sbjct: 117 NKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAY 173
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
+ L+N+Y+ C L A +VF + + +W+ +IG YAQ EAI LF +M +
Sbjct: 174 IQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIAS 233
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ P+E+T VL A A ++ +Q+H I + G T + + ++D Y KC +
Sbjct: 234 VKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLAR 293
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
F++M E ++ WN +I GH+ Y EA+ L +M G + T +++L + +
Sbjct: 294 DLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLG 353
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
A+E GK H I K + +V +G+ALVDMYAKCG + A +VF + K++++W ++V
Sbjct: 354 ALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIV 413
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
G A G G +ALE++ MQ +++KP+ TF+GVL+AC H GLV EG YFNSM +GI
Sbjct: 414 GLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQ 473
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEK 573
P ++H +V + G+ A + I++ P+ P+ V LLS C+ H +LV+ AA++
Sbjct: 474 PSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQ 533
Query: 574 ILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
++ DP++ +++LSN+Y+ W+ K+R++M E+++KK GCS E+ +H F
Sbjct: 534 LIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVK 593
Query: 634 SRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ Q +++E ++ + L GYVPD
Sbjct: 594 GDVSHPQSSEIYETLDDMMRRLKSAGYVPD 623
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 210/414 (50%), Gaps = 6/414 (1%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A+ +F+++P + +++I G++ +P A+ +++LM+ L+P+ +T+ +C
Sbjct: 93 ARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC-- 150
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
G GK++H + G ++++ N L+NMY CG L SA+ VFD + ++ +SW ++
Sbjct: 151 -GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATM 209
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
+ +Y Q +K+F + V +E + +VL ACA +L+ Q+H + + +
Sbjct: 210 IGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGI 269
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
F + L+++Y KC LA +F+ + +L W+ +I G+ + EA+ LF +
Sbjct: 270 GFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNE 329
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
M SG+ +VT + +L A + G+ LH I K + ++D Y+KC
Sbjct: 330 MQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGS 389
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EAIELLKDMLFEGHCPNLYTYSNILN 387
+E +++ F EM E DV++W ALI G LA C G +A+EL +M P+ T+ +L
Sbjct: 390 IESAMRVFQEMPEKDVMTWTALIVG-LAMCGQGLKALELFHEMQMSEVKPDAITFVGVLA 448
Query: 388 ISSDIPAIEWGKQTHCCIV-KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
S + G + K G ++ +VDM + GR+ +A + ++
Sbjct: 449 ACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNM 502
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 158/283 (55%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N L+ MY + A+K+FD+M ++V+SW+ +I ++Q +P A+ F
Sbjct: 167 GFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLF 226
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R M ++PN T V ++ACA D + K++H + +G+ ++ +++ L+++Y KC
Sbjct: 227 RRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKC 286
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G A+ +F+ E+N W +++ + + ++ L +F + SGV + + AS+L
Sbjct: 287 GCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLL 346
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC LG L++G +H + K +E D + L+++YAKC ++ A RVF + D+
Sbjct: 347 IACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVM 406
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
W+ALI G A G+ +A++LF +M S + P +TF VL A
Sbjct: 407 TWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAA 449
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 2/193 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GFH + + L+ +Y K A+ LF++MPE+N+ W+ +I+G + E AL+ F
Sbjct: 270 GFH--TVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLF 327
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M ++ + T + AC G GK +H + + +E++ + L++MY KC
Sbjct: 328 NEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKC 387
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + SA VF E++ ++W +L+ CG+ + L++F + S V + VL
Sbjct: 388 GSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVL 447
Query: 185 GACAVLGNLKVGM 197
AC+ G + G+
Sbjct: 448 AACSHAGLVNEGI 460
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/598 (28%), Positives = 319/598 (53%), Gaps = 16/598 (2%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
YV + C G + + +HG M ++G + V+ L+N+Y +C A+ +FD
Sbjct: 79 YVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMP 138
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
++N ++W +L++ + E L++F+ + G S ++ +L AC+ + +G Q
Sbjct: 139 DKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQ 198
Query: 199 IHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
+H K D +MG L LY K L+ R F ++ W+ +I A+
Sbjct: 199 VHGYSIKYGA--DTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAED 256
Query: 257 GKACE-AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
+ + LF+ M G+MP+E T + V+ + G+Q+ + K+G + V
Sbjct: 257 ENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPV 316
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL-----------ASCHYGEAI 364
N+ + Y + +E+++ F+EMD +++WNA+I+G+ A +A+
Sbjct: 317 KNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQAL 376
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+L +D++ P+L+T+S+IL++ S + A+E G+Q H +K G S+VV+ SALV+MY
Sbjct: 377 KLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMY 436
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
KCG + A K F + ++ V+W +M+ GY+QHG ++A++++ M + +PN+ TF+
Sbjct: 437 NKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFV 496
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
+LSAC + GLVEE YF+ M ++ I P +DH +V +F G+ A+ FIK +
Sbjct: 497 SLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGF 556
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EPN+ +W L++GC++H ++ L YAA+++L P+ +++L N+Y W + A+V
Sbjct: 557 EPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARV 616
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
RK+ K + + SW +++K+++F Q +L++++ L GY P
Sbjct: 617 RKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLENLLEKAKAVGYEP 674
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 256/516 (49%), Gaps = 31/516 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ +G ++ L+ +Y++ + DA++LFD MP++NV++W+ALI+G + P +A
Sbjct: 102 MVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALA 161
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ P++YT G +SAC++ G+++HG + G + + + N L +
Sbjct: 162 LEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRL 221
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH----GLKIFLLSRKSGVAIS 176
Y K G L S F + ++N I+W +++SS C E + GL +FL + GV +
Sbjct: 222 YCKSGDLESGLRAFKGTPDKNVITWTTMISS---CAEDENYLDLGLSLFLDMLEGGVMPN 278
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
EF+ SV+ C ++ +G Q+ + +K E + V + LY + + D A R+F
Sbjct: 279 EFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFE 338
Query: 237 NIQLPDLTAWSALIGGYAQL-----------GKACEAIDLFVKMFSSGLMPSEVTFSYVL 285
+ + W+A+I GYAQ+ + +A+ LF + S L P TFS +L
Sbjct: 339 EMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSIL 398
Query: 286 GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV 345
+ + G Q+H+ IK G S V + +++ Y+KC +E + K F EM V
Sbjct: 399 SVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPV 458
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
+W ++I+G+ +AI+L +DM+ G PN T+ ++L+ S +E ++ +
Sbjct: 459 TWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMM 518
Query: 406 -----VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
++P D +VDM+ + GRL+DA N W++++ G H
Sbjct: 519 RNEYHIEPLVDHY----GCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSH- 573
Query: 460 LGREALEIYSMMQENKIKPN-DNTFIGVLSACVHIG 494
G L Y+ + ++KP T++ +L+ + G
Sbjct: 574 -GNMELAFYAADRLLELKPKVIETYVLLLNMYISTG 608
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 190/404 (47%), Gaps = 14/404 (3%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
+ G + +L C G L +H + K D FVA L+N+Y +C
Sbjct: 69 RDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSR 128
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A R+F + ++ W+ALI G+ + A+++FV+M G PS T +L A +
Sbjct: 129 DARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACS 188
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ G+Q+H IK G + T + N++ Y K LE L+ F + +V++W
Sbjct: 189 AARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTT 248
Query: 350 LIAGHLASCHYGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
+I+ +Y + + L DML G PN +T ++++++ + GKQ K
Sbjct: 249 MISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKV 308
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ---------HG 459
G ++N+ + ++ + +Y + G ++A ++F+ + S ++++WN M+ GYAQ H
Sbjct: 309 GCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHA 368
Query: 460 LGR--EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
R +AL+++ + +++KP+ TF +LS C + +E+G + I+ +S +
Sbjct: 369 RSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVV 428
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ A V C F++ P V W ++SG H
Sbjct: 429 NSALVNMYNKCGSIECATKAFVEMPTRTP--VTWTSMISGYSQH 470
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 2/189 (1%)
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
ML +G Y +L+ + + + H +VK G +++ + ++LV++Y +C
Sbjct: 67 MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCAS 126
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
DAR++FD + KN+V+W ++ G+ + ALE++ M E P+ T G+LSA
Sbjct: 127 SRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSA 186
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C ++ G I+ +G S+ L+ G K +P + N +
Sbjct: 187 CSAARRIDLGQQVHGYSIK-YGADTITSMGNSLCRLYCKSGDLESGLRAFKGTP-DKNVI 244
Query: 550 VWRCLLSGC 558
W ++S C
Sbjct: 245 TWTTMISSC 253
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 281/480 (58%), Gaps = 2/480 (0%)
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
AC+ L ++ G H V + L+ D V+ LI +YA+C K+ A +VF I DL +
Sbjct: 136 ACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVS 195
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+++I GY+++ A EA+ LF +M +G P+E++ VLGA ++ + G + ++
Sbjct: 196 WNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVV 255
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
+ + F+ + ++ Y KC L + + FD M + D V+WNA+I G+ + EAI+
Sbjct: 256 ENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIK 315
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L +DM P+ T IL+ + I A++ GKQ + GF +V +G+ALVDMYA
Sbjct: 316 LFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYA 375
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQE-NKIKPNDNTF 483
KCG L++A +VF + +KN VSWN M+ A HG +EAL ++ SMM E + PND TF
Sbjct: 376 KCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITF 435
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+GVLSACVH GLV+EG F+ M G+ P+++H + +V LF+ G A++F+ + P
Sbjct: 436 VGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMP 495
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
+P++V+ LL C+ K++ + + +L +P ++ +++ S +YA WD++A+
Sbjct: 496 EKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSAR 555
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+R +MK+K + K GCSW ++ +++H F + I++H++++ L L GY+P+
Sbjct: 556 MRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIPN 615
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 217/441 (49%), Gaps = 16/441 (3%)
Query: 1 MITSGFH-PNVITYNHLLLMYVKFSRIND---AQKLFDEMPERNVISWSALISGFSQI-G 55
++T+ H PN Y K + + D A F + + S++ +I G S
Sbjct: 55 LLTNSIHKPNSFLY--------KIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWN 106
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
+AL ++ M L+PN TY AC++ +G+ H + R GL+ + HVS+
Sbjct: 107 KSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSH 166
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
LI MY +CG + A+ VFD +++ +SW S++S Y + + +F ++G
Sbjct: 167 SLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQP 226
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+E S SVLGAC LG+LK+G + V + + + F+ LI++Y KC L A R+F
Sbjct: 227 NEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIF 286
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+++ D W+A+I GYAQ G + EAI LF M S P ++T +L A A +
Sbjct: 287 DSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALD 346
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+Q+ + GF +V ++D Y+KC L+ + + F M + VSWNA+I+
Sbjct: 347 LGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALA 406
Query: 356 ASCHYGEAIELLKDMLFEGHC--PNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDS 412
EA+ L K M+ EG PN T+ +L+ ++ G++ H G
Sbjct: 407 FHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVP 466
Query: 413 NVVIGSALVDMYAKCGRLNDA 433
+ S +VD++++ G L +A
Sbjct: 467 KIEHYSCMVDLFSRAGHLEEA 487
>gi|222632692|gb|EEE64824.1| hypothetical protein OsJ_19680 [Oryza sativa Japonica Group]
Length = 688
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 216/676 (31%), Positives = 339/676 (50%), Gaps = 38/676 (5%)
Query: 8 PNVITYNHL--LLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG-MPEVALNYF 64
P + +HL L + SR+ DA +LFD MP R+ ++++ L++G + G P +
Sbjct: 21 PPLSMLDHLARLKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFS 80
Query: 65 RLMVCCV-LEP-NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
RL L P + + +CA+ DAR L++ + CL
Sbjct: 81 RLRASSPPLAPADPFVLSLVFKSCAAAADAR--------FLPHAASLHAFAAGCL----- 127
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
GL A VFD +N +SW +L++S + G L+ F R SGV ++ A+
Sbjct: 128 --GL---ALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAA 182
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
L ACA G L G ++H+ K L+ +VA L LYA+C +D A S + D
Sbjct: 183 ALTACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRD 242
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMF----SSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ AW+ +I Y Q G+A EAI+ FV+M S P+E T++ V+ A AD+ G
Sbjct: 243 VAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGE 302
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCE-LLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
QLH+ + GF+ VAN+++ Y++ L + F E DVVSW+A+I+G+
Sbjct: 303 QLHAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQE 362
Query: 358 CHYGEAIELLKDMLFEGHCP--NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+A L ++M CP N +T +++L++ + +++ G+Q H V G + + +
Sbjct: 363 GLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAM 422
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
I SAL+DMY K G + DA VF H ++VSW M+VGYA+HG ++ALE++ M
Sbjct: 423 IRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVG 482
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+KP+ TFIGVL+AC H G VE G Y N M + +G+ P +H VV L G+ A
Sbjct: 483 LKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEA 542
Query: 536 YEFI-KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
E I K + E + VVW LL C + G+ AAE+ + +P AH+ ++N+YA
Sbjct: 543 EELIGKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYAS 602
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQ-----NKMHYFSTSRFAQFQGIDLHEVMN 649
W E A+ R +MK+K + K G W+ + ++ F S Q ++ ++
Sbjct: 603 KGQWHEAAQERHMMKQKGVVK--GAGWSSITVGGEGRRVGVFVASDRTHPQDSAIYRMLE 660
Query: 650 QLSVHLFDGGYVPDPI 665
+ YVPD +
Sbjct: 661 LIYFGTGMARYVPDQL 676
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G + + + L+ MY K + DA +F + +V+SW+A+I G+++ G + AL
Sbjct: 413 VAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKAL 472
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLINM 120
F+ M L+P++ T++G ++AC G+ G M + GL C++++
Sbjct: 473 ELFQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDL 532
Query: 121 YGKCGLLSSAQFVFD--ASLERNSISWVSLLSSYCQCGEHVHGLK 163
G+ G ++ A+ + A+ ER+ + W SLL + GE G K
Sbjct: 533 LGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARGEEETGKK 577
>gi|356509887|ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Glycine max]
Length = 750
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/608 (31%), Positives = 323/608 (53%), Gaps = 12/608 (1%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE---PN 75
+Y + R+ A+K+FDE+P+R+V++W+ALI G G PE L R + V + PN
Sbjct: 147 LYSRCGRMELARKVFDEIPKRDVVAWTALIIGHVHNGEPEKGLRCLRHVHGVVEDDEKPN 206
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
T+ G AC + G G +HG + ++G+ S + + +++MY KCG+ A F
Sbjct: 207 AKTWEGGFLACGNLGAVSEGSCLHGVVVKNGVA--SFIQSSVLDMYSKCGVPREAYRSFC 264
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+ ++ + W S++ Y + G L++F +++ + VL ++
Sbjct: 265 EVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQENEIRPDGVVVGCVLSGFGNSMDVFQ 324
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G H ++ + D+ V L+ +Y K L LA R+F Q W+ ++ GY +
Sbjct: 325 GKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLAERIFPLCQGSG-DGWNFMVFGYGK 383
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF--SSFT 313
+G+ + ++LF +M G+ + + + + A + GR +H +IK GF
Sbjct: 384 VGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIK-GFLDGKNI 442
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V N++++ Y KC + + + F+ E DVVSWN LI+ H+ + EA+ L M+ E
Sbjct: 443 SVTNSLVEMYGKCGKMTFAWRIFNT-SETDVVSWNTLISSHVHIKQHEEAVNLFSKMVRE 501
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN T +L+ S + ++E G++ HC I + GF N+ +G+AL+DMYAKCG+L +
Sbjct: 502 DQKPNTATLVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKS 561
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
R VFD + K+++ WN M+ GY +G ALEI+ M+E+ + PN TF+ +LSAC H
Sbjct: 562 RMVFDSMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSACAHA 621
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
GLVEEG + F M + + ++P + H +V L G + A + S PI P+ VW
Sbjct: 622 GLVEEGKYMFARM-KSYSVNPNLKHYTCMVDLLGRYGNVQEAEAMVLSMPISPDGGVWGA 680
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK-S 612
LL CKTH + +G A+ + +PE+ +I+++N+Y+ W+E VR+ MKE+ S
Sbjct: 681 LLGHCKTHNQIEMGIRIAKYAIDLEPENDGYYIIMANMYSFIGRWEEAENVRRTMKERCS 740
Query: 613 LKKDTGCS 620
+ K G S
Sbjct: 741 MGKKAGWS 748
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/566 (25%), Positives = 274/566 (48%), Gaps = 24/566 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQK---LFDEMPERNVISWSALI-SGFSQIGMP 57
+TSG N+ + L+ +Y + ND LF +P ++ +++ + S FS+ P
Sbjct: 31 VTSGHSTNLFMASKLISLYDSLN--NDPSSCSTLFHSLPSKDTFLYNSFLKSLFSRSLFP 88
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
V L+ F M L PN++T VSA A G +H ++GL H S
Sbjct: 89 RV-LSLFSHMRASNLSPNHFTLPIVVSAAAHLTLLPHGASLHALASKTGL---FHSSASF 144
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+++Y +CG + A+ VFD +R+ ++W +L+ + GE GL+ L GV +
Sbjct: 145 VSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHVHNGEPEKGLRC--LRHVHGVVEDD 202
Query: 178 -----FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+ AC LG + G +H +V K + F+ ++++Y+KC A
Sbjct: 203 EKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKNGVA--SFIQSSVLDMYSKCGVPREAY 260
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
R F + DL W+++IG YA++G E + LF +M + + P V VL F +
Sbjct: 261 RSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQENEIRPDGVVVGCVLSGFGNSM 320
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
+ G+ H +II+ + V +++L Y K +L + + F + + WN ++
Sbjct: 321 DVFQGKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLAERIF-PLCQGSGDGWNFMVF 379
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
G+ + +EL ++M + G ++ + + + A+ G+ HC ++K D
Sbjct: 380 GYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIKGFLDG 439
Query: 413 -NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
N+ + ++LV+MY KCG++ A ++F+ S ++VSWNT++ + EA+ ++S M
Sbjct: 440 KNISVTNSLVEMYGKCGKMTFAWRIFN-TSETDVVSWNTLISSHVHIKQHEEAVNLFSKM 498
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
KPN T + VLSAC H+ +E+G + I + G + + +++ ++A GQ
Sbjct: 499 VREDQKPNTATLVVVLSACSHLASLEKG-ERVHCYINESGFTLNLPLGTALIDMYAKCGQ 557
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSG 557
+++ + S +E + + W ++SG
Sbjct: 558 LQKS-RMVFDSMMEKDVICWNAMISG 582
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 206/419 (49%), Gaps = 3/419 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
+L MY K +A + F E+ ++++ W+++I +++IGM L FR M + P+
Sbjct: 246 VLDMYSKCGVPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQENEIRPD 305
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
+S + D GK HG + R + V++ L+ MY K G+LS A+ +F
Sbjct: 306 GVVVGCVLSGFGNSMDVFQGKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLAERIFP 365
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
+ + W ++ Y + GE+V +++F + G+ AS + +CA LG + +
Sbjct: 366 LC-QGSGDGWNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNL 424
Query: 196 GMQIHSLVFKCALEFDKF-VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G IH V K L+ V L+ +Y KC K+ A R+F N D+ +W+ LI +
Sbjct: 425 GRSIHCNVIKGFLDGKNISVTNSLVEMYGKCGKMTFAWRIF-NTSETDVVSWNTLISSHV 483
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
+ + EA++LF KM P+ T VL A + + G ++H I + GF+
Sbjct: 484 HIKQHEEAVNLFSKMVREDQKPNTATLVVVLSACSHLASLEKGERVHCYINESGFTLNLP 543
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
+ ++D Y+KC L++S FD M E DV+ WNA+I+G+ + + A+E+ + M
Sbjct: 544 LGTALIDMYAKCGQLQKSRMVFDSMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESN 603
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN T+ ++L+ + +E GK + + N+ + +VD+ + G + +A
Sbjct: 604 VMPNGITFLSLLSACAHAGLVEEGKYMFARMKSYSVNPNLKHYTCMVDLLGRYGNVQEA 662
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 212/476 (44%), Gaps = 15/476 (3%)
Query: 97 EIHGRMYRSGLELNSHVSNCLINMYGKCGL-LSSAQFVFDASLERNSISWVSLLSSYCQC 155
H SG N +++ LI++Y SS +F + +++ + S L S
Sbjct: 25 RFHALTVTSGHSTNLFMASKLISLYDSLNNDPSSCSTLFHSLPSKDTFLYNSFLKSLFSR 84
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
L +F R S ++ + F+ V+ A A L L G +H+L K L +
Sbjct: 85 SLFPRVLSLFSHMRASNLSPNHFTLPIVVSAAAHLTLLPHGASLHALASKTGLFHS---S 141
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG---KACEAIDLFVKMFSS 272
++LY++C +++LA +VF I D+ AW+ALI G+ G K + +
Sbjct: 142 ASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHVHNGEPEKGLRCLRHVHGVVED 201
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
P+ T+ A ++ G LH +++K G +S F+ ++VLD YSKC + E+
Sbjct: 202 DEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKNGVAS--FIQSSVLDMYSKCGVPREA 259
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
++F E+ D++ W ++I + GE + L ++M P+ +L+ +
Sbjct: 260 YRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQENEIRPDGVVVGCVLSGFGNS 319
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+ GK H I++ + + + +L+ MY K G L+ A ++F L + WN M+
Sbjct: 320 MDVFQGKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLAERIFP-LCQGSGDGWNFMV 378
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
GY + G + +E++ MQ I +++C +G V G ++I+
Sbjct: 379 FGYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIKGFLD 438
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG---CKTHKDLV 565
+ S+V ++ G+ A+ +S E + V W L+S K H++ V
Sbjct: 439 GKNISVTNSLVEMYGKCGKMTFAWRIFNTS--ETDVVSWNTLISSHVHIKQHEEAV 492
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 83/163 (50%), Gaps = 3/163 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SGF N+ L+ MY K ++ ++ +FD M E++VI W+A+ISG+ G E AL
Sbjct: 536 SGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSMMEKDVICWNAMISGYGMNGYAESALEI 595
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F+ M + PN T++ +SACA G GK + RM + N C++++ G+
Sbjct: 596 FQHMEESNVMPNGITFLSLLSACAHAGLVEEGKYMFARMKSYSVNPNLKHYTCMVDLLGR 655
Query: 124 CGLLSSAQ-FVFDASLERNSISWVSLLSSYCQCGEHVH-GLKI 164
G + A+ V + + W +LL +C+ + G++I
Sbjct: 656 YGNVQEAEAMVLSMPISPDGGVWGALL-GHCKTHNQIEMGIRI 697
>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
Length = 860
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/599 (30%), Positives = 308/599 (51%), Gaps = 14/599 (2%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
T G + + + +L ++ + + +++FD MP R V++W+ +I+ ++Q G AL
Sbjct: 263 TLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALE 322
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+ C +EP+ + AC+ + G+ +H R+ E + V L++MY
Sbjct: 323 LYH---CMDIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYV 379
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG L+ A+ FD R+ ISW SL+++Y L++F GV + + +
Sbjct: 380 KCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCT 439
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
V+ AC+ L +L G +HS V D+FV L+++Y+K ++D A VF +I +
Sbjct: 440 VIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKR 499
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+W ++ Q G + EA++++ ++ G P FS L + +++ R +H
Sbjct: 500 YPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHG 559
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
+I F ++N +++ Y+KC LE++ FD+M E + VSW +I G+ + E
Sbjct: 560 VIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAE 619
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+EL K M + PN + +++ +D+ A+ G++ H + G +N VI +ALV+
Sbjct: 620 ALELYKAMDVQ---PNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVN 676
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MYAKCG+L AR+ FD + +WN+M YAQ G G + LE+Y M ++PN T
Sbjct: 677 MYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGIT 736
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK-- 540
+ VL AC H+G++EE H F M+ DHGI+P +H + + L G+ A + +K
Sbjct: 737 LLSVLVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMA 796
Query: 541 -----SSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
S P V W L CKTH D AAEK+ DPED++ +++LS Y+
Sbjct: 797 SGESGSEAASPVAVSAWMSFLGACKTHNDWGRAAGAAEKLYELDPEDSAPYVLLSQTYS 855
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 162/551 (29%), Positives = 287/551 (52%), Gaps = 12/551 (2%)
Query: 11 ITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF-RLMVC 69
I N L+ MY K + DA+++F + +N SW+A+I+ ++Q G A+ F +M
Sbjct: 166 ILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSE 225
Query: 70 CVLEPNYYTYVGAVSACASRGDARSGKEIHG---RMYRSGLELNSHVSNCLINMYGKCGL 126
+EP+ TY G ++AC++ GD +G IH R+Y GLE + + + +++++ +CG
Sbjct: 226 GRVEPDPITYAGVLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGS 285
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L + +FD R ++W +++++Y Q G + L+++ + + + ++VL A
Sbjct: 286 LVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELY---HCMDIEPDDIALSNVLQA 342
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
C+ L NL+ G +HS + E V L+++Y KC L A R F + D+ +W
Sbjct: 343 CSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISW 402
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
++LI Y+ EA+++F M G+ P+ +TF V+ A + + + GR LHS ++
Sbjct: 403 TSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVA 462
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G S FV N ++ YSK ++ + FD + SW ++ + H EA+E+
Sbjct: 463 TGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEM 522
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+ EG P +S L + + + + H I F ++V+ + L+++YAK
Sbjct: 523 YSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAK 582
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG L AR VFD ++ KN VSW TM+ GYAQ+G EALE+Y M ++PN F+ V
Sbjct: 583 CGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMD---VQPNFIAFVPV 639
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
+S+C +G + EG ++ + D G+ + ++V+++A G+ A EF S+ P
Sbjct: 640 ISSCADLGALVEG-QRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYC-P 697
Query: 547 NKVVWRCLLSG 557
+ W + +
Sbjct: 698 DAGAWNSMATA 708
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/555 (29%), Positives = 280/555 (50%), Gaps = 14/555 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+ + N LL +Y K + +++++F+ M R V +W+ +I+ + Q + AL FR M
Sbjct: 64 DTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFRRMD 123
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH--VSNCLINMYGKCGL 126
P+ T+ + AC S D +GK IH ++ S ++ + + N L+ MYGKCG
Sbjct: 124 A---PPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGKCGS 180
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG-VAISEFSCASVLG 185
L A+ VF +N+ SW +++++Y Q G +++F G V + A VL
Sbjct: 181 LEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLT 240
Query: 186 ACAVLGNLKVGMQIHSL---VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
AC+ LG+L+ GM+IH+L ++ LE+D + G+++L+A+C L +F +
Sbjct: 241 ACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRT 300
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ W+ +I Y Q G + EA++L+ M + P ++ S VL A + +K GR +HS
Sbjct: 301 VVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRAVHS 357
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
I F V ++D Y KC L E+ +TFD DV+SW +LI + E
Sbjct: 358 RIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGRE 417
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+E+ M EG PN T+ +++ S + ++ G+ H +V G S+ +G+ALV
Sbjct: 418 ALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVS 477
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MY+K GR++ AR VFD + K SW MLV Q+G EALE+YS + +P
Sbjct: 478 MYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPI 537
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F L +C + V + +I+ P + +++++A G+ +A +
Sbjct: 538 FSAALVSCTALEDVSRA-RAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKA-RLVFDQ 595
Query: 543 PIEPNKVVWRCLLSG 557
E N+V W ++ G
Sbjct: 596 MTEKNEVSWTTMIGG 610
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 265/515 (51%), Gaps = 14/515 (2%)
Query: 47 LISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG 106
+IS ++Q G AL + M ++PN T+ +SACA D GK++H R+ S
Sbjct: 1 MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60
Query: 107 LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
+++ + N L+N+Y KCG L ++ +F+A R +W +++++Y Q L+ F
Sbjct: 61 ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAF- 119
Query: 167 LSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA--LEFDKFVAMGLINLYAK 224
R+ S + SVLGAC +L+ G IH + + ++ D+ + L+ +Y K
Sbjct: 120 --RRMDAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGK 177
Query: 225 CEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSY 283
C L+ A RVF I+ + +W+A+I YAQ G AI++F M S G + P +T++
Sbjct: 178 CGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAG 237
Query: 284 VLGAFADVKETIGGRQLHSLIIK---MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD 340
VL A + + + G ++H+LI + +G + + +L +++C L + + FD M
Sbjct: 238 VLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMP 297
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
VV+W +IA + + EA+EL M E P+ SN+L S + +E G+
Sbjct: 298 HRTVVTWTTMIAAYNQRGYSMEALELYHCMDIE---PDDIALSNVLQACSRLKNLEQGRA 354
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
H I F+ ++++ + LVDMY KCG L +AR+ FD +++++SW +++ Y+
Sbjct: 355 VHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENF 414
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
GREALE++ M+ ++PN TF V+ AC + + G + ++ IS A
Sbjct: 415 GREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNA 474
Query: 521 SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+V +++ G+ A S P++ WR +L
Sbjct: 475 -LVSMYSKFGRVDFARMVFDSIPVK-RYPSWRVML 507
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 146/287 (50%), Gaps = 3/287 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + N L+ MY KF R++ A+ +FD +P + SW ++ +Q G A
Sbjct: 460 VVATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEA 519
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L + + P + A+ +C + D + IHG + S + +SN L+N+
Sbjct: 520 LEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNV 579
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L A+ VFD E+N +SW +++ Y Q G L+++ + V + +
Sbjct: 580 YAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELY---KAMDVQPNFIAF 636
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
V+ +CA LG L G ++H+ + L+ ++ + L+N+YAKC KL LA F +
Sbjct: 637 VPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYC 696
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
PD AW+++ YAQ G + ++L+ +M G+ P+ +T VL A
Sbjct: 697 PDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVA 743
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 522 VVHLFACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL-ST 577
++ +A +G R A YE + ++PN + C+LS C KD+ G+ +I S
Sbjct: 1 MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60
Query: 578 DPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
DT L N+YA+ +E+ ++ + M+ +++
Sbjct: 61 ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTV 96
>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
Length = 849
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 193/660 (29%), Positives = 331/660 (50%), Gaps = 3/660 (0%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
F + + N ++ Y K + DA+ +F + NV SW+ L++ ++Q G + L R
Sbjct: 112 FSGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLR 171
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINMYGKC 124
M + PN T + A + GD ++IH R + L + + LI+MY KC
Sbjct: 172 QMDLLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKC 231
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G + A+ VFD + ++ +++S+Y Q G V + F + SG+ ++ + A +
Sbjct: 232 GDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLF 291
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA G H L D V L+++Y++C L+ A RVF + ++
Sbjct: 292 RACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVV 351
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
W+ +I GYAQ G EA+ L+V M ++G+ P E+TF VL + + + GR +H +
Sbjct: 352 TWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHV 411
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE--MDEHDVVSWNALIAGHLASCHYGE 362
+ G+ S V + ++ YS C L +++ F + V+SW A++ +
Sbjct: 412 VDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRS 471
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+ L + M EG N+ T+ + ++ S I A+ G ++ G+ +VV+G++L++
Sbjct: 472 ALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLIN 531
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
+Y KCGRL+ A +VF HLS KN+V+WNT+L +Q+G + E+ M + +PN+ T
Sbjct: 532 LYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMT 591
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
+ +L C H GLV + YF SM+ H + P +H +V L GQ FI S
Sbjct: 592 LLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSK 651
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
P + V+W LL C H D+ G AA ++L DP++ S +++LSN++A M D
Sbjct: 652 PFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVK 711
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
+ K+ E+++KK+ S+ E+ +H F G + + + S + + G+VP
Sbjct: 712 SLAKLAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGFVP 771
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 145/282 (51%), Gaps = 2/282 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I S P+V+ L+ MY + + DA+++FD MP +NV++W+ +I+G++Q G + AL
Sbjct: 311 ILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEAL 370
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ M +EP+ T+V + +C+ +G++IH + +G + + V + LI MY
Sbjct: 371 QLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMY 430
Query: 122 GKCGLLSSAQFVFDASLERNS--ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
CG L A VF + +S ISW ++L++ + GE L +F GV + +
Sbjct: 431 SACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVT 490
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S + AC+ +G L G I V D + LINLY KC +LD A VF ++
Sbjct: 491 FVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLS 550
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTF 281
++ W+ ++ +Q G+ + +L +M G P+E+T
Sbjct: 551 FKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTL 592
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G+ +V+ L+ +Y K R++ A ++F + +N+++W+ +++ SQ G ++
Sbjct: 514 VIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLS 573
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRG-DARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ M +PN T + + C+ G A++ +Y L S CL++
Sbjct: 574 AELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVD 633
Query: 120 MYGKCGLLSSAQ-FVFDASLERNSISWVSLLSS 151
+ G+ G L + F+ +S+ W+SLL S
Sbjct: 634 LLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGS 666
>gi|357475531|ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509106|gb|AES90248.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 763
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 209/667 (31%), Positives = 338/667 (50%), Gaps = 53/667 (7%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
+ P+VI+ N + + K ++ +A+ +FDEMP R V SW+ +ISG+SQ G AL
Sbjct: 33 YPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVS 92
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M ++ N ++ +SAC G GK+IH +++SG + V + L++ Y +C
Sbjct: 93 FMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCC 152
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-------------------- 165
+ A+ VF+ + N + W +L+ Y Q ++IF
Sbjct: 153 GIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAK 212
Query: 166 -------------LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
+ R S V +EF+ VL CA L L VG +H L K +FD
Sbjct: 213 REDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDN 272
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLT-AWSALIGGYAQLGKACEAIDLFVKMFS 271
V+ L Y + +D A RV+ ++ + +LIGG +G+ EA +F +
Sbjct: 273 SVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGLRD 332
Query: 272 SGLMPSEVTFS-YVL-GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
L+ + + Y + G F K+ L KM T + NT++ YSK L
Sbjct: 333 KTLISNNLMIKGYAMSGQFKKSKK---------LFEKMSLKHLTSL-NTMITVYSKNGEL 382
Query: 330 EESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIEL---LKDMLFEGHCPNLYTYSNI 385
+E++K FD+ E + V+WN++++G++ + + EA++L ++ L E + T+S +
Sbjct: 383 DEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVE---YSRSTFSVL 439
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
+ + + + G+ H + K + NV +G+ALVD Y+KCG L DA++ F + S N+
Sbjct: 440 FRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNV 499
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
+W ++ GYA HG G EA+ + M + + PN TF+ VLSAC H GLV+EG +F+S
Sbjct: 500 AAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHS 559
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
M ++ I+P ++H VV L G+ + A EFI PI+ + V+W LL+ ++
Sbjct: 560 MQINYRITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVE 619
Query: 566 LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQ 625
LG AA K+ S DP SA + LSN+YA W + K+RK ++ L+KD G SW EL
Sbjct: 620 LGERAAVKLFSLDPNSVSALVTLSNMYARRGRWGKKTKIRKRLQSLELRKDQGFSWIELN 679
Query: 626 NKMHYFS 632
N +H FS
Sbjct: 680 NNVHLFS 686
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 280/480 (58%), Gaps = 2/480 (0%)
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
AC+ L ++ G H V + L+ D V+ LI +YA+C K+ A +VF I DL +
Sbjct: 136 ACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVS 195
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+++I GY+++ A EA+ LF +M +G P+E++ VLGA ++ + G + ++
Sbjct: 196 WNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVV 255
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
+ + F+ + ++ Y KC L + + FD M + D V+WNA+I G+ + EAI+
Sbjct: 256 ENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIK 315
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L +DM P+ T IL+ + I A++ GKQ + GF +V +G+ALVDMYA
Sbjct: 316 LFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYA 375
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQE-NKIKPNDNTF 483
KCG L++A +VF + KN VSWN M+ A HG +EAL ++ SMM E + PND TF
Sbjct: 376 KCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITF 435
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+GVLSACVH GLV+EG F+ M G+ P+++H + +V LF+ G A++F+ + P
Sbjct: 436 VGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMP 495
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
+P++V+ LL C+ K++ + + +L +P ++ +++ S +YA WD++A+
Sbjct: 496 EKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSAR 555
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+R +MK+K + K GCSW ++ +++H F + I++H++++ L L GY+P+
Sbjct: 556 MRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIPN 615
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 218/441 (49%), Gaps = 16/441 (3%)
Query: 1 MITSGFH-PNVITYNHLLLMYVKFSRIND---AQKLFDEMPERNVISWSALISGFSQI-G 55
++T+ H PN Y K + + D A F + + S++ +I G S
Sbjct: 55 LLTNSIHKPNSFLY--------KIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWN 106
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN 115
+AL ++ M L+PN TY AC++ +G+ H + R GL+ + HVS+
Sbjct: 107 KSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSH 166
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
LI MY +CG + A+ VFD +++ +SW S++S Y + + +F ++G
Sbjct: 167 SLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQP 226
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+E S SVLGAC LG+LK+G + V + + + F+ LI++Y KC L A R+F
Sbjct: 227 NEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIF 286
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+++ D W+A+I GYAQ G + EAI LF M S P ++T +L A A +
Sbjct: 287 DSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALD 346
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+Q+ + GF +V ++D Y+KC L+ + + F M + + VSWNA+I+
Sbjct: 347 LGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALA 406
Query: 356 ASCHYGEAIELLKDMLFEGHC--PNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDS 412
EA+ L K M+ EG PN T+ +L+ ++ G++ H G
Sbjct: 407 FHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVP 466
Query: 413 NVVIGSALVDMYAKCGRLNDA 433
+ S +VD++++ G L +A
Sbjct: 467 KIEHYSCMVDLFSRAGHLEEA 487
>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
Length = 591
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 186/570 (32%), Positives = 296/570 (51%), Gaps = 16/570 (2%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS-----------NCLINMYGK 123
NY + G +++C GD R G +H + ++ S N L++MY +
Sbjct: 10 NYARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYAR 69
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG A VFD R+++SW SL+++ G+ + + L R A + +V
Sbjct: 70 CGRREDAARVFDEMRVRDAVSWNSLIAASRGAGDALALFRRML--RSDARACDRATFTTV 127
Query: 184 LGACAVLG--NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
L CA G +L +H LV C E + V L+ Y +C A RVF +
Sbjct: 128 LSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEK 187
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+A+I G A+ E+ LF +M + + + T+S L A A G+Q+H
Sbjct: 188 NVITWTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCTLLACARSLAAREGQQVH 246
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
L++K GF + V + ++D YSKC L+E++L F E D V ++ G +
Sbjct: 247 GLVVKAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEE 306
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A EL +M+ G+ + T S +L GKQ H ++K F N + + LV
Sbjct: 307 KAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLV 366
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
+MY+KCG L ++ +VFD + SKN VSWN+++ +A+HG G E +++ M+ + KP D
Sbjct: 367 NMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDV 426
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF+ +L AC H+G ++G NSM +G+ PRM+H A VV + G A FI+
Sbjct: 427 TFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIED 486
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P + ++W+ L+ C H + +G++AAEK+L DP T+A+++LSN+Y+ WD+
Sbjct: 487 GPFTDSALLWQALMGACSFHGNSEVGKHAAEKLLLLDPSCTAAYVLLSNIYSSEGRWDDR 546
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
AKV K M E L+KDTG SW EL+ ++H F
Sbjct: 547 AKVMKRMSEMGLRKDTGKSWIELEKEVHSF 576
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/466 (30%), Positives = 236/466 (50%), Gaps = 14/466 (3%)
Query: 10 VITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVC 69
++ +N L+ MY + R DA ++FDEM R+ +SW++LI+ G AL FR M+
Sbjct: 57 LVAWNALVSMYARCGRREDAARVFDEMRVRDAVSWNSLIAASRGAG---DALALFRRMLR 113
Query: 70 CVLEP-NYYTYVGAVSACASRGDAR--SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
+ T+ +S CA G A + +HG + G E V N L+ Y +CG
Sbjct: 114 SDARACDRATFTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGS 173
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLG 185
+SA+ VF E+N I+W +++S + + +F + R + +SC L
Sbjct: 174 PASAERVFHGMAEKNVITWTAMISGMARAELYKESFSLFGQMIRTVDANNATYSC--TLL 231
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
ACA + G Q+H LV K E D V GL+++Y+KC ++ A VF + + PD
Sbjct: 232 ACARSLAAREGQQVHGLVVKAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVF 291
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
+ ++ G+AQ G +A +LF +M +G E T S VLGAF G+Q+H+L+I
Sbjct: 292 LTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVI 351
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K F T+V N +++ YSKC L ES++ FDEM + VSWN++IA H E +
Sbjct: 352 KRCFGVNTYVCNGLVNMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQ 411
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFDSNVVIGSALVDMY 424
L + M +G P T+ ++L+ S + + + G + + + G + + +VDM
Sbjct: 412 LFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDML 471
Query: 425 AKCGRLNDARK-VFDHLSSKNLVSWNTMLVGYAQHG---LGREALE 466
+ G L+DA+ + D + + + W ++ + HG +G+ A E
Sbjct: 472 GRAGLLDDAKSFIEDGPFTDSALLWQALMGACSFHGNSEVGKHAAE 517
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 178/339 (52%), Gaps = 3/339 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+++ GF V N L+ Y + A+++F M E+NVI+W+A+ISG ++ + + +
Sbjct: 149 VVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWTAMISGMARAELYKES 208
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M+ V + N TY + ACA AR G+++HG + ++G E + HV + L+++
Sbjct: 209 FSLFGQMIRTV-DANNATYSCTLLACARSLAAREGQQVHGLVVKAGFEADLHVESGLMDV 267
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCGL+ A VF + E + + +L + Q G ++F +G I E +
Sbjct: 268 YSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTV 327
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
++VLGA +G QIH+LV K + +V GL+N+Y+KC +L + +VF +
Sbjct: 328 STVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVQVFDEMPS 387
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ- 299
+ +W+++I +A+ G E LF M + G P++VTF +L A + V G +
Sbjct: 388 KNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEI 447
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE 338
L+S+ + G V+D + LL+++ K+F E
Sbjct: 448 LNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDA-KSFIE 485
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/619 (30%), Positives = 324/619 (52%), Gaps = 42/619 (6%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
+ +C + D +GK +H +S + ++++SN I +Y KC LL++A F+ + E N
Sbjct: 15 LKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPNV 74
Query: 143 -------------------------------ISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
+S+ +L+++Y G+ + L +F R+
Sbjct: 75 FSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREM 134
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM--GLINLYAKCEKLD 229
G+ + F+ + V+ AC ++ + Q+HSL F FD +V++ L+ Y+K L+
Sbjct: 135 GLVMDGFTFSGVITACC--NHVGLIRQLHSLAFSSG--FDSYVSVKNSLLTYYSKNGILE 190
Query: 230 LASRVFSNI--QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
A VF+ + ++ D +W+++I Y Q + +A+ L+ M G T + VL
Sbjct: 191 EAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTT 250
Query: 288 FADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL-LEESLKTFDEMDEHDVVS 346
F+ V++ GG Q H+ IK GF+ V + ++D Y+KC + ES K F+E+ D+V
Sbjct: 251 FSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVV 310
Query: 347 WNALIAGHLASCHYG-EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
WN +I+G+ + EA+E + M G+ P+ ++ ++ S++ + GKQ H
Sbjct: 311 WNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALA 370
Query: 406 VKPGFDSN-VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREA 464
+K SN + + +ALV MY+KCG L DARK+F + N V+ N+++ GYAQHG+G E+
Sbjct: 371 MKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTES 430
Query: 465 LEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVH 524
L ++ M I P T + +LSAC H G VEEG YFN M GI P +H + ++
Sbjct: 431 LNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMID 490
Query: 525 LFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSA 584
L G+ A I + P P W LL C+ + ++ L AA + L +P +
Sbjct: 491 LLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVP 550
Query: 585 HIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDL 644
+IML+++Y+ A W+E A++RK+M+++ ++K GCSW EL ++H F + + ++
Sbjct: 551 YIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEI 610
Query: 645 HEVMNQLSVHLFDGGYVPD 663
H ++++ V + GYVPD
Sbjct: 611 HMYLDEMFVKMKRAGYVPD 629
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 147/520 (28%), Positives = 262/520 (50%), Gaps = 21/520 (4%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
PNV ++N L+ Y K S I+ A LFD++P+ +++S++ LI+ ++ G AL+ F M
Sbjct: 72 PNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEM 131
Query: 68 VCCVLEPNYYTYVGAVSACASR-GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
L + +T+ G ++AC + G R ++H + SG + V N L+ Y K G+
Sbjct: 132 REMGLVMDGFTFSGVITACCNHVGLIR---QLHSLAFSSGFDSYVSVKNSLLTYYSKNGI 188
Query: 127 LSSAQFVFDASLE--RNSISWVSLLSSYCQCGEHVHGLKIFLLSRK---SGVAISEFSCA 181
L A+ VF+ E R+ +SW S++ +Y G+H GLK L R G I F+ A
Sbjct: 189 LEEAEMVFNGMGEEVRDEVSWNSMIVAY---GQHKRGLKALALYRDMVHRGFEIDMFTLA 245
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC-EKLDLASRVFSNIQL 240
SVL + + +L G+Q H+ K ++ V GLI++YAKC + + +VF I
Sbjct: 246 SVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICG 305
Query: 241 PDLTAWSALIGGYAQLGK-ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
DL W+ +I GY+Q + + EA++ F +M +G P + +F + A +++ G+Q
Sbjct: 306 SDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQ 365
Query: 300 LHSLIIKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
H+L +K S V N ++ YSKC L+++ K F M +H+ V+ N++IAG+
Sbjct: 366 FHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHG 425
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP--GFDSNVVI 416
E++ L + ML P T +IL+ + +E GK+ + ++K G +
Sbjct: 426 IGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKK-YFNMMKDIFGIEPEAEH 484
Query: 417 GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
S ++D+ + G+L++A ++ D + S +W +L ++ G L + Q +
Sbjct: 485 YSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKY--GNMELAEKAANQFLQ 542
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
++P + +L++ E ++RD GI +
Sbjct: 543 LEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKK 582
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 205/414 (49%), Gaps = 38/414 (9%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD------------- 229
+L +C +L G +H++ K + +++ I LY+KC L
Sbjct: 14 ILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPN 73
Query: 230 ------------------LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
+A +F I PDL +++ LI YA G A+ LF +M
Sbjct: 74 VFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMRE 133
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
GL+ TFS V+ A + I RQLHSL GF S+ V N++L +YSK +LEE
Sbjct: 134 MGLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEE 191
Query: 332 SLKTFDEMDE--HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
+ F+ M E D VSWN++I + +A+ L +DM+ G +++T +++L
Sbjct: 192 AEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTF 251
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR-LNDARKVFDHLSSKNLVSW 448
S + + G Q H +K GF+ N +GS L+DMYAKCG ++++RKVF+ + +LV W
Sbjct: 252 SCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVW 311
Query: 449 NTMLVGYAQHG-LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
NTM+ GY+Q+ L EALE + MQ P+D +F+ +SAC ++ +G + +
Sbjct: 312 NTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAM 371
Query: 508 RDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ S ++ ++V +++ G + A + + P + N V +++G H
Sbjct: 372 KSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP-QHNTVTLNSIIAGYAQH 424
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 53/329 (16%)
Query: 281 FSYVLGAFADV-------KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
FS+ L +F + K+ + G+ LH++ +K S T+++N + YSKC LL +
Sbjct: 4 FSWTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAH 63
Query: 334 KTFDEMDEHDVVSWNALIAG-------HLASCHYGE------------------------ 362
F++ E +V S+NALIA H+A + +
Sbjct: 64 HAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLS 123
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+ L +M G + +T+S + I++ + +Q H GFDS V + ++L+
Sbjct: 124 ALSLFGEMREMGLVMDGFTFSGV--ITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLT 181
Query: 423 MYAKCGRLNDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
Y+K G L +A VF+ + ++ VSWN+M+V Y QH G +AL +Y M + +
Sbjct: 182 YYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDM 241
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS-VVHLFACRG----QTRRA 535
T VL+ + + G + I+ R H+ S ++ ++A G ++R+
Sbjct: 242 FTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNR--HVGSGLIDMYAKCGAGMSESRKV 299
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
+E I S + VVW ++SG +K+L
Sbjct: 300 FEEICGSDL----VVWNTMISGYSQNKEL 324
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 278/482 (57%), Gaps = 1/482 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ + AC L G Q+H+ + F+ L+ +Y +C LD A V +
Sbjct: 47 AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 106
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ +W+ +I GY+Q + EA+DLF+KM +G +P+E T + VL + + + G+Q+H
Sbjct: 107 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 166
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
SL++K F S FV +++LD Y+K E ++E+ + FD + E DVVS A+I+G+
Sbjct: 167 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 226
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA++L + + EG N T++ ++ S + ++++GKQ H I++ V + ++L+
Sbjct: 227 EALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLI 286
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY+KCG+L +R+VFD++ +++VSWN ML+GY +HGLG E + ++ + + ++KP+
Sbjct: 287 DMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSV 345
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
T + VLS C H GLV+EG F++++++ H ++ L G+ +A I++
Sbjct: 346 TLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIEN 405
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P E +W LL C+ H ++ +G A+K+L +PE+ +++LSN+YA A MW +
Sbjct: 406 MPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDV 465
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
KVRK+M EK++ K+ G SW L +H F +S D++ + ++ V + G+V
Sbjct: 466 FKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFV 525
Query: 662 PD 663
PD
Sbjct: 526 PD 527
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 206/383 (53%), Gaps = 9/383 (2%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
++ Y A++AC R G+++H RM + + L+ MY +CG L A+ V
Sbjct: 41 RFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVL 100
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D ER+ +SW +++S Y Q HV L +F+ ++G +E++ A+VL +C+ ++
Sbjct: 101 DRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIY 160
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G Q+HSL+ K E FV L+++YAK E + A RVF + D+ + +A+I GYA
Sbjct: 161 QGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYA 220
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q G EA+DLF +++S G+ + VTF+ ++ A + + G+Q+H+LI++ F
Sbjct: 221 QKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVA 280
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
+ N+++D YSKC L S + FD M E VVSWNA++ G+ E I L KD+ E
Sbjct: 281 LQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEV 340
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA----LVDMYAKCGRL 430
P+ T +L+ S ++ G +VK + + ++ + ++D+ + GRL
Sbjct: 341 K-PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHTGHYGCIIDLLGRSGRL 396
Query: 431 NDARKVFDHLSSKNLVS-WNTML 452
A + +++ ++ S W ++L
Sbjct: 397 EKALNLIENMPFESTPSIWGSLL 419
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 194/395 (49%), Gaps = 14/395 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MIT+ + P V L+ MYV+ ++DA+ + D MPER+V+SW+ +ISG+SQ A
Sbjct: 68 MITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEA 127
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ PN YT +++C+ GK++H + ++ E + V + L++M
Sbjct: 128 LDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDM 187
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K + A+ VFD ER+ +S +++S Y Q G L +F G+ + +
Sbjct: 188 YAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTF 247
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM--GLINLYAKCEKLDLASRVFSNI 238
+++ A + L +L G Q+H+L+ + L F FVA+ LI++Y+KC KL + RVF N+
Sbjct: 248 TTLVTALSGLASLDYGKQVHALILRKELPF--FVALQNSLIDMYSKCGKLLYSRRVFDNM 305
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ +W+A++ GY + G E I LF K + P VT VL + G
Sbjct: 306 LERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDSVTLLAVLSGCSHGGLVDEGL 364
Query: 299 QLHSLIIKMGFSSF-TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS-WNALIAG--- 353
+ ++K + T ++D + LE++L + M S W +L+
Sbjct: 365 DIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRV 424
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
H A+ H G EL+ L E N Y + NI
Sbjct: 425 H-ANVHVG---ELVAQKLLEMEPENAGNYVILSNI 455
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%)
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M G + Y + + A+ G+Q H ++ + V +G+ LV MY +CG
Sbjct: 33 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 92
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L+DAR V D + +++VSW TM+ GY+Q EAL+++ M PN+ T VL++
Sbjct: 93 LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 152
Query: 490 C 490
C
Sbjct: 153 C 153
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/609 (31%), Positives = 320/609 (52%), Gaps = 40/609 (6%)
Query: 93 RSGKEIHGRMYRSGLE-----LNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVS 147
+S + IH +M ++GL L+ + C+I+ + L A VF+ E N + W +
Sbjct: 47 QSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDG--LPYAISVFETIQEPNLLIWNT 104
Query: 148 LLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
+ + + V LK+++ G+ + ++ +L +CA K G QIH V K
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSN------------------------------ 237
+ D FV LI++Y + +L+ A +VF
Sbjct: 165 YDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFD 224
Query: 238 -IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
I + D+ +W+A+I GYA+ G EA++LF +M + + P E T V+ A A
Sbjct: 225 EIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIEL 284
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
GRQ+HS I GF S + N+++D YSKC LE + F+ + DV+SWN LI G+
Sbjct: 285 GRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTH 344
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSNV 414
Y EA+ L ++ML G PN T +IL + + AI+ G+ H I K +
Sbjct: 345 MNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNAS 404
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ ++L+DMYAKCG + A +VF+ + K+L SWN M+ G+A HG A +I+S M++
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKI 464
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
I+P+D TF+G+LSAC G+++ G H F +M +D+ I+P+++H ++ L G +
Sbjct: 465 GIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKE 524
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
A E I + +EP+ V+W LL CK ++ LG A+ ++ +PE+ +++LSN+YA
Sbjct: 525 AEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYAT 584
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
A W+E AK+R ++ +K +KK GCS E+ + +H F + +++ ++ ++ V
Sbjct: 585 AGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 644
Query: 655 LFDGGYVPD 663
L G+VPD
Sbjct: 645 LEKAGFVPD 653
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 239/511 (46%), Gaps = 59/511 (11%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H +V++Y L+ Y I AQKLFDE+P ++V+SW+A+ISG+++ G + AL F+
Sbjct: 197 HRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKE 256
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ + P+ T V VSACA G G+++H + G N + N L+++Y KCG
Sbjct: 257 MMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGE 316
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L +A +F+ L ++ ISW +L+ Y + L +F +SG ++ + S+L A
Sbjct: 317 LETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPA 376
Query: 187 CAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
CA LG + +G IH + K A + LI++YAKC ++ A +VF++I L
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKSATNASS-LRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL-HS 302
++W+A+I G+A G+A A D+F +M G+ P ++TF +L A + GR + +
Sbjct: 436 SSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRT 495
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYG 361
+ + ++D L +E+ + + M+ E D V W +L L +C
Sbjct: 496 MTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSL----LKACKIR 551
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+EL + N++ I + P C ++ L
Sbjct: 552 GNVELGESFA-----------QNLIKIEPENPG--------CYVL-------------LS 579
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVS------------WNTMLVGYAQHGLGREALEIYS 469
++YA GR N+ K+ L+ K + + ++G H R EIY
Sbjct: 580 NIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR---EIYG 636
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
M++E ++ F+ S + +EE W
Sbjct: 637 MLEEMEVLLEKAGFVPDTSEVLQ--EMEEEW 665
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 211/439 (48%), Gaps = 41/439 (9%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD---LASRVFSNI 238
S+L C L +L++ IH+ + K L + L+ L D A VF I
Sbjct: 38 SLLHNCKTLQSLRL---IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETI 94
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
Q P+L W+ + G+A A+ L+V M S GL+P+ TF ++L + A K G+
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQ 154
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA-- 356
Q+H ++K+G+ FV +++ Y + LE++ K FD DVVS+ ALI G+ +
Sbjct: 155 QIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRG 214
Query: 357 -----------------------------SCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
+ +Y EA+EL K+M+ P+ T +++
Sbjct: 215 YIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVS 274
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ +IE G+Q H I GF SN+ I ++L+D+Y+KCG L A +F+ L K+++S
Sbjct: 275 ACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVIS 334
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG-WHYFNSM 506
WNT++ GY L +EAL ++ M + +PND T + +L AC H+G ++ G W +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH--KDL 564
R + S++ ++A G A++ + +S + + W ++ G H D
Sbjct: 395 KRLKSATNASSLRTSLIDMYAKCGDIEAAHQ-VFNSILHKSLSSWNAMIFGFAMHGRADA 453
Query: 565 VLGRYAAEKILSTDPEDTS 583
++ + + +P+D +
Sbjct: 454 AFDIFSRMRKIGIEPDDIT 472
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 136/555 (24%), Positives = 246/555 (44%), Gaps = 79/555 (14%)
Query: 1 MITSGFHPNVITYNHLLLMYV---KFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP 57
MI +G H + LL + V F + A +F+ + E N++ W+ + G + P
Sbjct: 56 MIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP 115
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
AL + M+ L PN YT+ + +CA + G++IHG + + G +L+ V L
Sbjct: 116 VSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSL 175
Query: 118 INMYGKCGLLSSAQFVFDASLER-------------------------------NSISWV 146
I++Y + G L A+ VFD S R + +SW
Sbjct: 176 ISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWN 235
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+++S Y + G + L++F K+ + E + +V+ ACA G++++G Q+HS +
Sbjct: 236 AMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDH 295
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
+ + L++LY+KC +L+ A +F + D+ +W+ LIGGY + EA+ LF
Sbjct: 296 GFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLF 355
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM--GFSSFTFVANTVLDFYS 324
+M SG P++VT +L A A + GR +H I K ++ + + +++D Y+
Sbjct: 356 QEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYA 415
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
KC +E + + F+ + + SWNA+I G A ++ M G P+ T+
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVG 475
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF-----DH 439
+L+ S + G L+ R +F D+
Sbjct: 476 LLSACS-----------------------------------RSGMLDLGRHIFRTMTQDY 500
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ L + M+ GL +EA E+ + M+ ++P+ + +L AC G VE G
Sbjct: 501 KITPKLEHYGCMIDLLGHSGLFKEAEEMINNME---MEPDGVIWCSLLKACKIRGNVELG 557
Query: 500 WHYFNSMIRDHGISP 514
+ ++I+ +P
Sbjct: 558 ESFAQNLIKIEPENP 572
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/499 (34%), Positives = 280/499 (56%), Gaps = 7/499 (1%)
Query: 169 RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
R++GV S + +L A L + Q H+ + K L+ D FV LI+ Y+
Sbjct: 96 RRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLF 154
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
D ASR+F + D+ W+A+I G+ + G A EA+ FV+M +G+ +E+T VL A
Sbjct: 155 DFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAA 214
Query: 289 ADVKETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
V++ GR +H L ++ G F+ ++++D Y KC +++ K FDEM +VV+W
Sbjct: 215 GKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTW 274
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
ALIAG++ S + + + + ++ML PN T S++L+ + + A+ G++ HC ++K
Sbjct: 275 TALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIK 334
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
+ N G+ L+D+Y KCG L +A VF+ L KN+ +W M+ G+A HG R+A ++
Sbjct: 335 NSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDL 394
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA 527
+ M + + PN+ TF+ VLSAC H GLVEEG F SM + P+ DH A +V LF
Sbjct: 395 FYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFG 454
Query: 528 CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIM 587
+G A I+ P+EP VVW L C HKD LG+YAA +++ P + + +
Sbjct: 455 RKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTL 514
Query: 588 LSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKM-HYFSTSRFAQFQGIDLHE 646
L+N+Y+E+ WDE A+VRK MK++ + K G SW E++ K+ + + + DL++
Sbjct: 515 LANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYK 574
Query: 647 VMNQLSVHLFDGGYVPDPI 665
++ + V + +PD +
Sbjct: 575 TLDTVGVQM----RLPDEL 589
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 177/355 (49%), Gaps = 3/355 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + N L+ Y + A +LFD +++V++W+A+I GF + G A
Sbjct: 129 IVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEA 188
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNCLIN 119
+ YF M + N T V + A D R G+ +HG +G ++ + + + L++
Sbjct: 189 MVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVD 248
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MYGKC AQ VFD RN ++W +L++ Y Q G+ +F KS VA +E +
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+SVL ACA +G L G ++H + K ++E + LI+LY KC L+ A VF +
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH 368
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ W+A+I G+A G A +A DLF M SS + P+EVTF VL A A GR+
Sbjct: 369 EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRR 428
Query: 300 LH-SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIA 352
L S+ + ++D + + LLEE+ + M E V W AL
Sbjct: 429 LFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 208/420 (49%), Gaps = 13/420 (3%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNY--FRLMVCCVLEPNYYTYVGAVSAC 86
A++L ++ ++ W +LI FS L++ +R M + P+ +T+ + A
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV 146
D+ + H + + GL+ + V N LI+ Y GL A +FD + +++ ++W
Sbjct: 115 FKLRDSNPF-QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWT 173
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+++ + + G + F+ +K+GVA +E + SVL A + +++ G +H L +
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET 233
Query: 207 A-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
++ D F+ L+++Y KC D A +VF + ++ W+ALI GY Q + + +
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLV 293
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F +M S + P+E T S VL A A V GR++H +IK T T++D Y K
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVK 353
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C LEE++ F+ + E +V +W A+I G A + +A +L ML PN T+ +
Sbjct: 354 CGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAV 413
Query: 386 LNISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
L+ + +E G++ + ++P D + +VD++ + G L +A+ + + +
Sbjct: 414 LSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY----ACMVDLFGRKGLLEEAKALIERM 469
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + N L+ +YVK + +A +F+ + E+NV +W+A+I+GF+ G A
Sbjct: 332 MIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDA 391
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY-RSGLELNSHVSNCLIN 119
+ F M+ + PN T++ +SACA G G+ + M R +E + C+++
Sbjct: 392 FDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVD 451
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
++G+ GLL A+ + + +E ++ W +L S
Sbjct: 452 LFGRKGLLEEAKALIERMPMEPTNVVWGALFGS 484
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 192/607 (31%), Positives = 321/607 (52%), Gaps = 42/607 (6%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGL------LSSAQFVFDASLERNSISWVSLL 149
+ IH +M ++GL ++ + LI C L L A VF+ E N + W ++
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEF---CVLSPHFDGLPYAISVFETIQEPNLLIWNTMF 60
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ + V L +++ G+ + ++ +L +CA + G QIH V K +
Sbjct: 61 RGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYD 120
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSN-------------------------------I 238
D +V LI++Y + +L+ A +VF I
Sbjct: 121 LDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEI 180
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ D+ +W+A+I GYA+ G EA++LF +M + + P E T V+ A A GR
Sbjct: 181 PIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGR 240
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+HS I GF S + N ++D Y KC +E + F+ + DV+SWN LI G+
Sbjct: 241 QVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMN 300
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSNVVI 416
Y EA+ L ++ML G PN T +IL + + AIE G+ H I K G +
Sbjct: 301 LYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSH 360
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
++L+DMYAKCG + A++VFD + +++L SWN M+ G+A HG A +I+S M++N+I
Sbjct: 361 RTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEI 420
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
+P+D TF+G+LSAC H G+++ G H F SM D+ I+P+++H ++ L G + A
Sbjct: 421 EPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAE 480
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
E I + +EP+ V+W LL CK H ++ LG A+ ++ +P++ ++++LSN+YA A
Sbjct: 481 EMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAG 540
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W+E AK+R ++ +K +KK GCS E+ + +H F + +++ ++ ++ V L
Sbjct: 541 RWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLE 600
Query: 657 DGGYVPD 663
+ G+VPD
Sbjct: 601 EAGFVPD 607
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 139/555 (25%), Positives = 243/555 (43%), Gaps = 79/555 (14%)
Query: 1 MITSGFHPNVITYNHLL---LMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP 57
MI +G H + L+ ++ F + A +F+ + E N++ W+ + G + P
Sbjct: 10 MIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP 69
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
AL + M+ L PN YT+ + +CA R G++IHG + + G +L+ +V L
Sbjct: 70 VSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSL 129
Query: 118 INMYGKCGLLSSAQFVFDASLER-------------------------------NSISWV 146
I+MY + G L A+ VFD S R + +SW
Sbjct: 130 ISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWN 189
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+++S Y + G + L++F K+ V E + SV+ ACA ++++G Q+HS +
Sbjct: 190 AMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDH 249
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
+ + LI+LY KC +++ A +F + D+ +W+ LIGGY + EA+ LF
Sbjct: 250 GFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 309
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM--GFSSFTFVANTVLDFYS 324
+M SG P++VT +L A A + GR +H I K G ++ + +++D Y+
Sbjct: 310 QEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYA 369
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
KC +E + + FD + + SWNA+I G A ++ M P+ T+
Sbjct: 370 KCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVG 429
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF-----DH 439
+L+ S G L+ R +F D+
Sbjct: 430 LLSACS-----------------------------------HSGMLDLGRHIFRSMKEDY 454
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ L + M+ GL +EA E+ + M+ ++P+ + +L AC G VE G
Sbjct: 455 KITPKLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACKMHGNVELG 511
Query: 500 WHYFNSMIRDHGISP 514
Y ++I+ +P
Sbjct: 512 ESYAQNLIKIEPKNP 526
>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 709
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 186/542 (34%), Positives = 292/542 (53%), Gaps = 4/542 (0%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y+ + + A + G IH + + + N L+NMY KC L+SA +FD
Sbjct: 8 YINLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMP 67
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
ERN +SW S+++ G L +F + R+ V +EF+ S L AC++ N+
Sbjct: 68 ERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAY 127
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
QI+SLV + LE + F+ + + KL A ++F + D W+ ++GGY +
Sbjct: 128 QIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEF- 186
Query: 258 KACEAIDLFVK-MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
+ E I +F + M G+ P E TF+ L A + G Q+H+ +++ G+ V
Sbjct: 187 -SSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVG 245
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
N+++D Y K + LEE K FDE+ DV SW + G L A+ ++ M G
Sbjct: 246 NSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVK 305
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
PN +T + LN + + ++E GKQ H +K G D +V + +AL+DMYAKCG ++ A V
Sbjct: 306 PNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTV 365
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
F +S+++VSW TM++ AQ+G EAL+I+ M+E ++PN TFI VL AC G V
Sbjct: 366 FRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFV 425
Query: 497 EEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+EGW Y +SM +D+GI P DH +V + G + A E I P P VW+ LLS
Sbjct: 426 DEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLS 485
Query: 557 GCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
C+ H D+ G+ AAE + D D S++++LSN+ AE + WD +R++M+ +++KK
Sbjct: 486 ACQIHGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAETSNWDCVVSLRELMETRNVKKV 545
Query: 617 TG 618
G
Sbjct: 546 PG 547
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 234/476 (49%), Gaps = 18/476 (3%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM-VCCVL 72
NHLL MY+K + A +LFDEMPERNV+SWS++++G G AL+ F M +
Sbjct: 44 NHLLNMYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFV 103
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+PN +T+V A+ AC+ + +I+ + RSGLE N + N + + G L+ A
Sbjct: 104 KPNEFTFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQ 163
Query: 133 VFDASLERNSISWVSLLSSYCQ-CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
+F+ S R++++W +++ Y + E + ++ + GV EF+ AS L A +
Sbjct: 164 IFETSPIRDTVTWNTMMGGYLEFSSEQIPVFWRYM--NREGVKPDEFTFASALTGLATIS 221
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+LK+GMQ+H+ + + D V L+++Y K +KL+ + F I D+ +W+ +
Sbjct: 222 SLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMAD 281
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G Q G+ A+ + KM G+ P++ T + L A A + G+Q H L IK+G
Sbjct: 282 GCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDV 341
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
V N +LD Y+KC ++ + F + VVSW +I + GEA+++ +M
Sbjct: 342 DVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMK 401
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK-----PGFDSNVVIGSALVDMYAK 426
PN T+ +L S ++ G + + K PG D + +V + +
Sbjct: 402 ETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYI----CMVSILGR 457
Query: 427 CGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
G + +A+++ + + W T+L HG +E + E+ IK + N
Sbjct: 458 AGLIKEAKELILRMPFHPGVRVWQTLLSACQIHG----DVETGKLAAEHAIKHDKN 509
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 150/295 (50%), Gaps = 6/295 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG NV N L V+ ++ +A ++F+ P R+ ++W+ ++ G+ + ++
Sbjct: 133 VVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEFSSEQIP 192
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ ++R M ++P+ +T+ A++ A+ + G ++H ++ RSG + V N L++M
Sbjct: 193 V-FWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDM 251
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K L FD ++ SW + Q GE L + +K GV ++F+
Sbjct: 252 YLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTL 311
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+ L ACA L +++ G Q H L K + D V L+++YAKC +D A VF +
Sbjct: 312 ATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNS 371
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL-----GAFAD 290
+ +W+ +I AQ G+ EA+ +F +M + + P+ +TF VL G F D
Sbjct: 372 RSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVD 426
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 107/196 (54%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG+ ++ N L+ MY+K ++ + K FDE+P ++V SW+ + G Q G P +A
Sbjct: 233 LVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMA 292
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M ++PN +T A++ACA GK+ HG + G +++ V N L++M
Sbjct: 293 LAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDM 352
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + SA VF ++ R+ +SW +++ + Q G+ L+IF +++ V + +
Sbjct: 353 YAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITF 412
Query: 181 ASVLGACAVLGNLKVG 196
VL AC+ G + G
Sbjct: 413 ICVLYACSQGGFVDEG 428
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 278/482 (57%), Gaps = 1/482 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ + AC L G Q+H+ + F+ L+ +Y +C LD A V +
Sbjct: 15 AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 74
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ +W+ +I GY+Q + EA+DLF+KM +G +P+E T + VL + + + G+Q+H
Sbjct: 75 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 134
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
SL++K F S FV +++LD Y+K E ++E+ + FD + E DVVS A+I+G+
Sbjct: 135 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 194
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA++L + + EG N T++ ++ S + ++++GKQ H I++ V + ++L+
Sbjct: 195 EALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLI 254
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY+KCG+L +R+VFD++ +++VSWN ML+GY +HGLG E + ++ + + ++KP+
Sbjct: 255 DMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSV 313
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
T + VLS C H GLV+EG F++++++ H ++ L G+ +A I++
Sbjct: 314 TLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIEN 373
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P E +W LL C+ H ++ +G A+K+L +PE+ +++LSN+YA A MW +
Sbjct: 374 MPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDV 433
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
KVRK+M EK++ K+ G SW L +H F +S D++ + ++ V + G+V
Sbjct: 434 FKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFV 493
Query: 662 PD 663
PD
Sbjct: 494 PD 495
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 206/383 (53%), Gaps = 9/383 (2%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
++ Y A++AC R G+++H RM + + L+ MY +CG L A+ V
Sbjct: 9 RFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVL 68
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D ER+ +SW +++S Y Q HV L +F+ ++G +E++ A+VL +C+ ++
Sbjct: 69 DRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIY 128
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G Q+HSL+ K E FV L+++YAK E + A RVF + D+ + +A+I GYA
Sbjct: 129 QGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYA 188
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q G EA+DLF +++S G+ + VTF+ ++ A + + G+Q+H+LI++ F
Sbjct: 189 QKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVA 248
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
+ N+++D YSKC L S + FD M E VVSWNA++ G+ E I L KD+ E
Sbjct: 249 LQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEV 308
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA----LVDMYAKCGRL 430
P+ T +L+ S ++ G +VK + + ++ + ++D+ + GRL
Sbjct: 309 K-PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHTGHYGCIIDLLGRSGRL 364
Query: 431 NDARKVFDHLSSKNLVS-WNTML 452
A + +++ ++ S W ++L
Sbjct: 365 EKALNLIENMPFESTPSIWGSLL 387
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 194/395 (49%), Gaps = 14/395 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MIT+ + P V L+ MYV+ ++DA+ + D MPER+V+SW+ +ISG+SQ A
Sbjct: 36 MITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEA 95
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ PN YT +++C+ GK++H + ++ E + V + L++M
Sbjct: 96 LDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDM 155
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K + A+ VFD ER+ +S +++S Y Q G L +F G+ + +
Sbjct: 156 YAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTF 215
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM--GLINLYAKCEKLDLASRVFSNI 238
+++ A + L +L G Q+H+L+ + L F FVA+ LI++Y+KC KL + RVF N+
Sbjct: 216 TTLVTALSGLASLDYGKQVHALILRKELPF--FVALQNSLIDMYSKCGKLLYSRRVFDNM 273
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ +W+A++ GY + G E I LF K + P VT VL + G
Sbjct: 274 LERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDSVTLLAVLSGCSHGGLVDEGL 332
Query: 299 QLHSLIIKMGFSSF-TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS-WNALIAG--- 353
+ ++K + T ++D + LE++L + M S W +L+
Sbjct: 333 DIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRV 392
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
H A+ H G EL+ L E N Y + NI
Sbjct: 393 H-ANVHVG---ELVAQKLLEMEPENAGNYVILSNI 423
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%)
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M G + Y + + A+ G+Q H ++ + V +G+ LV MY +CG
Sbjct: 1 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L+DAR V D + +++VSW TM+ GY+Q EAL+++ M PN+ T VL++
Sbjct: 61 LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120
Query: 490 C 490
C
Sbjct: 121 C 121
>gi|255568940|ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535253|gb|EEF36930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/508 (33%), Positives = 289/508 (56%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N L+ +Y + AQ++F ++ ++ +S+++LISG SQ G + AL F
Sbjct: 320 GFFLETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELF 379
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M L+P+ T +SACAS G+++H ++G+ L+ + L+++Y KC
Sbjct: 380 KKMQLDHLKPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKC 439
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+++A F + N + W +L +Y Q IF + G+ ++F+ S+L
Sbjct: 440 SDITTAHKFFATTQTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSIL 499
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C G L +G QIHS K EF+ +V LI++YAK KLD+A + + D+
Sbjct: 500 RTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVV 559
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ALI GY Q EA++LF +M + G+ + FS + A A ++ G+Q+H+
Sbjct: 560 SWTALIAGYTQHDLFTEALNLFDEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQS 619
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
G+S + N ++ Y++C ++E+ F+++D D +SWNAL++G S + EA+
Sbjct: 620 YISGYSEDLSIGNALVSLYARCGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEAL 679
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ M +L+T+ + ++ ++++ I+ GKQ H I+K GFDS + + +AL+ +Y
Sbjct: 680 KIFAQMTRANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLY 739
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG ++ A++ F + KN +SWN M+ GY+QHG G EA+ ++ M++ KPN TF+
Sbjct: 740 AKCGCIDGAKREFFEIPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVGAKPNHVTFV 799
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGI 512
GV+SAC H+GLV EG YF SM ++HG+
Sbjct: 800 GVISACSHVGLVNEGLAYFESMSKEHGL 827
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 288/557 (51%), Gaps = 9/557 (1%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + + L+ Y +N K+FD+MP R++++W+ ++SG L F
Sbjct: 117 GFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLF 176
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDA-RSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
MV + PN T + A S A ++IH + GL +S N LI++Y K
Sbjct: 177 AQMVEENVNPNEVTVASVLRAYGSGNVAFYYVEQIHASIISRGLGTSSIACNPLIDLYAK 236
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
G + SA+ VFD ++S+SWV+++SSY Q G +++F SG++ + + +SV
Sbjct: 237 NGFIRSARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSV 296
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L ACA + +G Q+H+LVFKC + +V L+ LY++ A +VFS I+ D
Sbjct: 297 LSACAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQQVFSKIKCKDE 356
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
++++LI G +Q G + A++LF KM L P VT + +L A A +K G QLHS
Sbjct: 357 VSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACASIKSLSKGEQLHSY 416
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
IK G + ++LD Y KC + + K F +VV WN ++ + + ++
Sbjct: 417 AIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNVMLVAYGQLDNLSKS 476
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ + M EG PN +TY +IL + A++ G+Q H +K GF+ NV + S L+DM
Sbjct: 477 FCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDM 536
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
YAK G+L+ AR + L+ +++VSW ++ GY QH L EAL ++ M I+ ++ F
Sbjct: 537 YAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLNRGIQSDNIGF 596
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR---AYEFIK 540
+SAC I + +G ++ G S + ++V L+A G+ + A+E I
Sbjct: 597 SSAISACAGIQALSQGQQ-IHAQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKID 655
Query: 541 SSPIEPNKVVWRCLLSG 557
+ + + W L+SG
Sbjct: 656 A----KDSISWNALMSG 668
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 168/564 (29%), Positives = 293/564 (51%), Gaps = 8/564 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I+ G + I N L+ +Y K I A+K+FDE+ ++ +SW A+IS +SQ G E A
Sbjct: 215 IISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNGFGEEA 274
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M L P Y + +SACA G+++H +++ G L ++V N L+ +
Sbjct: 275 IRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCNALVTL 334
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G SAQ VF ++ +S+ SL+S Q G L++F + + +
Sbjct: 335 YSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTV 394
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L ACA + +L G Q+HS K + D + L++LY KC + A + F+ Q
Sbjct: 395 ASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQT 454
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+ ++ Y QL ++ +F +M GL+P++ T+ +L G Q+
Sbjct: 455 ENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQI 514
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS IK GF +V + ++D Y+K L+ + ++E DVVSW ALIAG+ +
Sbjct: 515 HSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLF 574
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA+ L +ML G + +S+ ++ + I A+ G+Q H G+ ++ IG+AL
Sbjct: 575 TEALNLFDEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNAL 634
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V +YA+CGR+ +A F+ + +K+ +SWN ++ G+AQ G EAL+I++ M IK +
Sbjct: 635 VSLYARCGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFAQMTRANIKASL 694
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA---CRGQTRRAYE 537
TF +SA ++ +++G ++MI G ++ +++ L+A C +R +
Sbjct: 695 FTFGSAVSAAANMANIKQGKQ-IHAMIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFF 753
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTH 561
I E N++ W +++G H
Sbjct: 754 EIP----EKNEISWNAMITGYSQH 773
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 199/397 (50%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I +G ++I LL +YVK S I A K F NV+ W+ ++ + Q+ +
Sbjct: 418 IKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNVMLVAYGQLDNLSKSF 477
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
FR M L PN +TY + C S G G++IH + ++G E N +V + LI+MY
Sbjct: 478 CIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDMY 537
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
K G L A+ + E + +SW +L++ Y Q L +F G+ +
Sbjct: 538 AKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLNRGIQSDNIGFS 597
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S + ACA + L G QIH+ + D + L++LYA+C ++ A+ F I
Sbjct: 598 SAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKIDAK 657
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +W+AL+ G+AQ G EA+ +F +M + + S TF + A A++ G+Q+H
Sbjct: 658 DSISWNALMSGFAQSGYCEEALKIFAQMTRANIKASLFTFGSAVSAAANMANIKQGKQIH 717
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
++I+K GF S V+N ++ Y+KC ++ + + F E+ E + +SWNA+I G+
Sbjct: 718 AMIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIPEKNEISWNAMITGYSQHGCGI 777
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
EA+ L + M G PN T+ +++ S + + G
Sbjct: 778 EAVNLFQKMKQVGAKPNHVTFVGVISACSHVGLVNEG 814
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 145/494 (29%), Positives = 231/494 (46%), Gaps = 21/494 (4%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TY+ + C + K++H ++ + G + S + + LI Y G L+S VFD
Sbjct: 89 TYLWLLDFCLNSASFLDCKKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDM 148
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
R+ ++W +LS L +F + V +E + ASVL A G+ V
Sbjct: 149 PSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRA---YGSGNVAF 205
Query: 198 ----QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
QIH+ + L LI+LYAK + A +VF + + D +W A+I Y
Sbjct: 206 YYVEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSY 265
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+Q G EAI LF +M SGL P+ FS VL A A ++ G QLH+L+ K GF T
Sbjct: 266 SQNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLET 325
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+V N ++ YS+ + + F ++ D VS+N+LI+G A+EL K M +
Sbjct: 326 YVCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLD 385
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
P+ T +++L+ + I ++ G+Q H +K G +++I +L+D+Y KC + A
Sbjct: 386 HLKPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTA 445
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
K F ++N+V WN MLV Y Q ++ I+ MQ + PN T+ +L C
Sbjct: 446 HKFFATTQTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSF 505
Query: 494 GLVEEGWHYFNSMIRD------HGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
G ++ G + I+ + S +D A + L RG RR E +
Sbjct: 506 GALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLN--------EED 557
Query: 548 KVVWRCLLSGCKTH 561
V W L++G H
Sbjct: 558 VVSWTALIAGYTQH 571
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 145/306 (47%), Gaps = 36/306 (11%)
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
++LHS I+K+GF + + + +++FY L +K FD+M +++WN +++G +A+
Sbjct: 107 KKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVAN 166
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNI-SSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ L M+ E PN T +++L S A + +Q H I+ G ++ +
Sbjct: 167 KTSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSGNVAFYYVEQIHASIISRGLGTSSIA 226
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ L+D+YAK G + ARKVFD L K+ VSW ++ Y+Q+G G EA+ ++ M + +
Sbjct: 227 CNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGL 286
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHG-------------ISPRMDHIASVV 523
P F VLSAC I L + G ++++ G + R+ + S
Sbjct: 287 SPTPYVFSSVLSACAKIELFDIG-EQLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQ 345
Query: 524 HLFA---CR---------------GQTRRAYEFIKSSPIE---PNKVVWRCLLSGCKTHK 562
+F+ C+ G + RA E K ++ P+ V LLS C + K
Sbjct: 346 QVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACASIK 405
Query: 563 DLVLGR 568
L G
Sbjct: 406 SLSKGE 411
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 109/194 (56%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG+ ++ N L+ +Y + RI +A F+++ ++ ISW+AL+SGF+Q G E AL
Sbjct: 622 SGYSEDLSIGNALVSLYARCGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKI 681
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F M ++ + +T+ AVSA A+ + + GK+IH + ++G + VSN LI +Y K
Sbjct: 682 FAQMTRANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAK 741
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + A+ F E+N ISW ++++ Y Q G + + +F ++ G + + V
Sbjct: 742 CGCIDGAKREFFEIPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVGAKPNHVTFVGV 801
Query: 184 LGACAVLGNLKVGM 197
+ AC+ +G + G+
Sbjct: 802 ISACSHVGLVNEGL 815
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +GF + N L+ +Y K I+ A++ F E+PE+N ISW+A+I+G+SQ G A
Sbjct: 720 IMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIPEKNEISWNAMITGYSQHGCGIEA 779
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSG 95
+N F+ M +PN+ T+VG +SAC+ G G
Sbjct: 780 VNLFQKMKQVGAKPNHVTFVGVISACSHVGLVNEG 814
>gi|449531597|ref|XP_004172772.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Cucumis sativus]
Length = 680
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 199/643 (30%), Positives = 316/643 (49%), Gaps = 37/643 (5%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N+L+ MY +F + DA+K+FDEM +RN+++W+ ++S F+ G P A+ + M
Sbjct: 37 DVFLANNLISMYAEFFNVRDAEKVFDEMTDRNIVTWTTMVSAFTDGGRPYEAIRLYNDMP 96
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
PN Y Y + AC GD GK I R+Y L+ ++ + N L++M+ KCG L+
Sbjct: 97 KSE-TPNGYMYSAVLKACGFVGDLGLGKLIQERIYEDKLQADTILMNSLMDMFVKCGSLN 155
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF----------------------- 165
A VF + +W ++S Y + G V K+F
Sbjct: 156 DAVEVFHNISRATTTTWNIIVSGYSKAGLMVEAEKLFHCMPHPNVVSWNSMIAGFADNGS 215
Query: 166 -------LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGL 218
+ K + + +F+ L A+ G L +G Q+HS V K E F L
Sbjct: 216 QRALEFVSMMHKRCIKLDDFTFPCALKISALHGLLFIGKQVHSYVTKLGYESSCFTLSAL 275
Query: 219 INLYAKCEKLDLASRVFS-----NIQLPD-LTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
I++Y+ C L A ++F N + D L W++++ GY A++L ++ S
Sbjct: 276 IDMYSNCNDLIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCS 335
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G + TF L ++ G QLH LI+ G+ V + ++D Y+K ++++
Sbjct: 336 GALLDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDA 395
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
L F + D+++W+ LI G A + K ML + + + S IL + S++
Sbjct: 396 LAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNL 455
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
++ GKQ H VK G++ ++L+DMY+KCG + DA +F K++VSW ++
Sbjct: 456 ASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGII 515
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
VG Q+G EA+ + M + I PN+ TF+GVLSAC + GLVEE FNSM +G+
Sbjct: 516 VGCGQNGKAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVEEARSIFNSMKSVYGL 575
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
P ++H +V L A G A + I + P EPN+ WR LL C T D L A+
Sbjct: 576 EPHLEHYCCMVDLLASVGLPEEAEKLIANMPFEPNQTTWRTLLGACGTRNDTKLINRVAD 635
Query: 573 KILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
+L P D S ++ LSN YA MW +K R+ K+ +KK
Sbjct: 636 GLLEATPNDPSTYVTLSNAYASLGMWHTLSKAREASKKFGIKK 678
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 133/547 (24%), Positives = 251/547 (45%), Gaps = 78/547 (14%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
CA+ + G IH + + G + ++N LI+MY + + A+ VFD +RN ++W
Sbjct: 13 CATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNIVTW 72
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+++S++ G ++++ KS + + ++VL AC +G+L +G I +++
Sbjct: 73 TTMVSAFTDGGRPYEAIRLYNDMPKSETP-NGYMYSAVLKACGFVGDLGLGKLIQERIYE 131
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
L+ D + L++++ KC L+ A VF NI T W+ ++ GY++ G EA
Sbjct: 132 DKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEA--- 188
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADV-------------KETIG---------------- 296
K+F P+ V+++ ++ FAD K I
Sbjct: 189 -EKLFHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKISALH 247
Query: 297 -----GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD------EHDVV 345
G+Q+HS + K+G+ S F + ++D YS C L E++K FD+ ++
Sbjct: 248 GLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLA 307
Query: 346 SWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI 405
WN++++G++ + A+ LL ++ G + YT+ L + ++ + G Q H I
Sbjct: 308 LWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLI 367
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
V G++ + V+GS LVD+YAK ++DA +F L K++++W+ +++G AQ GL A
Sbjct: 368 VTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAF 427
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRD------HGISPRMD-- 517
++ M E + + +L C ++ + G ++ I+ +D
Sbjct: 428 SMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMY 487
Query: 518 ----HIASVVHLFACR---------------GQTRRAYEFIK------SSPIEPNKVVWR 552
I + LF C GQ +A E ++ S I PN++ +
Sbjct: 488 SKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFL 547
Query: 553 CLLSGCK 559
+LS C+
Sbjct: 548 GVLSACR 554
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 186/393 (47%), Gaps = 13/393 (3%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE------RNVISWSALISGFSQIGMPE 58
G+ + T + L+ MY + + +A KLFD+ N+ W++++SG+ +
Sbjct: 264 GYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQ 323
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
ALN + C + YT+ GA+ C + R G ++HG + G EL+ V + L+
Sbjct: 324 AALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILV 383
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
++Y K + A +F ++ I+W L+ Q G + +F + I F
Sbjct: 384 DLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHF 443
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+++L C+ L +L+ G Q+H+L K E + F L+++Y+KC +++ A +F
Sbjct: 444 VISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCE 503
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA--FADVKETIG 296
Q D+ +W+ +I G Q GKA EA+ F +M SG+ P+E+TF VL A +A + E
Sbjct: 504 QEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVEE-- 561
Query: 297 GRQL-HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGH 354
R + +S+ G ++D + L EE+ K M E + +W L+ G
Sbjct: 562 ARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIANMPFEPNQTTWRTLL-GA 620
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
+ + + I + D L E + TY + N
Sbjct: 621 CGTRNDTKLINRVADGLLEATPNDPSTYVTLSN 653
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 182/419 (43%), Gaps = 49/419 (11%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A L CA + K G IH+ + K D F+A LI++YA+ + A +VF +
Sbjct: 7 AKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTD 66
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+ ++ + G+ EAI L+ M S P+ +S VL A V + G+ +
Sbjct: 67 RNIVTWTTMVSAFTDGGRPYEAIRLYNDMPKSE-TPNGYMYSAVLKACGFVGDLGLGKLI 125
Query: 301 HSLIIKMGFSSFTFVANTVLDF-------------------------------YSKCELL 329
I + + T + N+++D YSK L+
Sbjct: 126 QERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLM 185
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL--YTYSNILN 387
E+ K F M +VVSWN++IAG A A+E + M C L +T+ L
Sbjct: 186 VEAEKLFHCMPHPNVVSWNSMIAG-FADNGSQRALEFVSMM--HKRCIKLDDFTFPCALK 242
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS------ 441
IS+ + GKQ H + K G++S+ SAL+DMY+ C L +A K+FD S
Sbjct: 243 ISALHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASI 302
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
S NL WN+ML GY + + AL + S + + + TF G L C+++ G
Sbjct: 303 SDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQ 362
Query: 502 YFNSMIRDHGISPRMDHIAS--VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
+ +I G +D++ +V L+A A P + + W L+ GC
Sbjct: 363 -LHGLIVTCGY--ELDYVVGSILVDLYAKLANIDDALAIFHRLP-RKDIIAWSGLIMGC 417
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 130/256 (50%), Gaps = 6/256 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++T G+ + + + L+ +Y K + I+DA +F +P +++I+WS LI G +QIG+ +A
Sbjct: 367 IVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLA 426
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F+ M+ V E +++ + C++ RSGK++H +SG E+ L++M
Sbjct: 427 FSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDM 486
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A +F E++ +SW ++ Q G+ ++ F +SG+ +E +
Sbjct: 487 YSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITF 546
Query: 181 ASVLGACAVLGNLKVGMQIHS---LVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
VL AC G ++ I + V+ + + M ++L A + A ++ +N
Sbjct: 547 LGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCM--VDLLASVGLPEEAEKLIAN 604
Query: 238 IQL-PDLTAWSALIGG 252
+ P+ T W L+G
Sbjct: 605 MPFEPNQTTWRTLLGA 620
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 278/482 (57%), Gaps = 1/482 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+ + AC L G Q+H+ + F+ L+ +Y +C LD A V +
Sbjct: 15 AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 74
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ +W+ +I GY+Q + EA+DLF+KM +G +P+E T + VL + + + G+Q+H
Sbjct: 75 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 134
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
SL++K F S FV +++LD Y+K E ++E+ + FD + E DVVS A+I+G+
Sbjct: 135 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 194
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA++L + + EG N T++ ++ S + ++++GKQ H I++ V + ++L+
Sbjct: 195 EALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLI 254
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMY+KCG+L +R+VFD++ +++VSWN ML+GY +HGLG E + ++ + + ++KP+
Sbjct: 255 DMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSV 313
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
T + VLS C H GLV+EG F++++++ H ++ L G+ +A I++
Sbjct: 314 TLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIEN 373
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
P E +W LL C+ H ++ +G A+K+L +PE+ +++LSN+YA A MW +
Sbjct: 374 MPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDV 433
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
KVRK+M EK++ K+ G SW L +H F +S D++ + ++ V + G+V
Sbjct: 434 FKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFV 493
Query: 662 PD 663
PD
Sbjct: 494 PD 495
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 206/383 (53%), Gaps = 9/383 (2%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
++ Y A++AC R G+++H RM + + L+ MY +CG L A+ V
Sbjct: 9 RFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVL 68
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D ER+ +SW +++S Y Q HV L +F+ ++G +E++ A+VL +C+ ++
Sbjct: 69 DRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIY 128
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G Q+HSL+ K E FV L+++YAK E + A RVF + D+ + +A+I GYA
Sbjct: 129 QGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYA 188
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q G EA+DLF +++S G+ + VTF+ ++ A + + G+Q+H+LI++ F
Sbjct: 189 QKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVA 248
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
+ N+++D YSKC L S + FD M E VVSWNA++ G+ E I L KD+ E
Sbjct: 249 LQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEV 308
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA----LVDMYAKCGRL 430
P+ T +L+ S ++ G +VK + + ++ + ++D+ + GRL
Sbjct: 309 K-PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHTGHYGCIIDLLGRSGRL 364
Query: 431 NDARKVFDHLSSKNLVS-WNTML 452
A + +++ ++ S W ++L
Sbjct: 365 EKALNLIENMPFESTPSIWGSLL 387
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 194/395 (49%), Gaps = 14/395 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MIT+ + P V L+ MYV+ ++DA+ + D MPER+V+SW+ +ISG+SQ A
Sbjct: 36 MITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEA 95
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ PN YT +++C+ GK++H + ++ E + V + L++M
Sbjct: 96 LDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDM 155
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K + A+ VFD ER+ +S +++S Y Q G L +F G+ + +
Sbjct: 156 YAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTF 215
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM--GLINLYAKCEKLDLASRVFSNI 238
+++ A + L +L G Q+H+L+ + L F FVA+ LI++Y+KC KL + RVF N+
Sbjct: 216 TTLVTALSGLASLDYGKQVHALILRKELPF--FVALQNSLIDMYSKCGKLLYSRRVFDNM 273
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ +W+A++ GY + G E I LF K + P VT VL + G
Sbjct: 274 LERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDSVTLLAVLSGCSHGGLVDEGL 332
Query: 299 QLHSLIIKMGFSSF-TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS-WNALIAG--- 353
+ ++K + T ++D + LE++L + M S W +L+
Sbjct: 333 DIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRV 392
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
H A+ H G EL+ L E N Y + NI
Sbjct: 393 H-ANVHVG---ELVAQKLLEMEPENAGNYVILSNI 423
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%)
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M G + Y + + A+ G+Q H ++ + V +G+ LV MY +CG
Sbjct: 1 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
L+DAR V D + +++VSW TM+ GY+Q EAL+++ M PN+ T VL++
Sbjct: 61 LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120
Query: 490 C 490
C
Sbjct: 121 C 121
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 197/668 (29%), Positives = 338/668 (50%), Gaps = 16/668 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEVALN 62
SG+ +V+ N ++ MY K + A +F + + +VISW+ ++ +N
Sbjct: 364 SGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVN 423
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGR-MYRSGLELNSHVSNCLINMY 121
F M+ ++PN +++ ++AC++ G++IH + R + S V+ L++MY
Sbjct: 424 TFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMY 483
Query: 122 GKCGLLSSAQFVFDASL--ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
GKCG +S A+ VF R+ ++W +L +Y Q + + GV S
Sbjct: 484 GKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALS 543
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA---MGLINLYAKCEKLDLASRVFS 236
SVL +C Q ++ C LE A LI+++ +C +L+ A VF+
Sbjct: 544 FTSVLSSCYC-------SQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFN 596
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ D+ +W+A++ A+ E +LF +M G++P + T + L T+G
Sbjct: 597 EMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCL-ASTTLG 655
Query: 297 -GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+ +H+ + ++G + V N +L+ YS C E+L F+ M D+VSWN + A +
Sbjct: 656 LGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYA 715
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+ EA+ L + M EG P+ T+S LN+S + GK H + G DS+V
Sbjct: 716 QAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVS 775
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ + LV +YAKCG+L++A +F +V N ++ AQHG EA++++ MQ+
Sbjct: 776 VATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEG 835
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
++P+ T + ++SAC H G+VEEG F +M GISP ++H A V L GQ A
Sbjct: 836 VRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHA 895
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
+ I+ P E N +VW LL CK D LG A++IL DP +++AH++LSN+Y
Sbjct: 896 EQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCAT 955
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
W + RK M ++++K G SW E+ ++H F + + +++ V+++L + +
Sbjct: 956 GKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLM 1015
Query: 656 FDGGYVPD 663
GY D
Sbjct: 1016 RRAGYEAD 1023
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 189/654 (28%), Positives = 306/654 (46%), Gaps = 47/654 (7%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G ++ N L+ MYV+ + +A +F +M ERNV+SW+ALIS +Q G A
Sbjct: 54 AGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFAL 113
Query: 64 FRLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH----VSNCLI 118
FR M+ PN YT V ++ACA+ D G+ IH ++ GLE S V N +I
Sbjct: 114 FRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMI 173
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE-HVHGLKIFLLSRKSGVAISE 177
NMY KCG L A VF A E++ +SW ++ +Y Q + L+IF +A +
Sbjct: 174 NMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNV 233
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ + LGAC +L+ G +HSL+ + +L FD + LIN+Y KC + A VF
Sbjct: 234 ITFITALGACT---SLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKA 290
Query: 238 I---QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
+ Q DL +W+A+I + G+ +A+ +F ++ G+ P+ VT +L A A
Sbjct: 291 MASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVD 350
Query: 295 IG-GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIA 352
G R H I + G+ + N ++ Y+KC + F + + DV+SWN ++
Sbjct: 351 FGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLG 410
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD- 411
+G+ + ML G PN ++ ILN S+ A+++G++ H I+ D
Sbjct: 411 ASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY 470
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDH--LSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ + LV MY KCG +++A VF L S++LV+WN ML YAQ+ +EA
Sbjct: 471 VESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALM 530
Query: 470 MMQENKIKPNDNTFIGVLSAC--------VHIGLVEEGWHYF---NSMIRDHG------- 511
M + + P+ +F VLS+C + + ++E G+ ++I HG
Sbjct: 531 EMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQ 590
Query: 512 ---ISPRMDH--IASVVHLFACRGQTR---RAYEFIKSSPIE---PNKVVWRCLLSGCKT 560
+ MDH + S + + + R + + +E P+K L C
Sbjct: 591 ARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLA 650
Query: 561 HKDLVLGRYAAEKILSTDPE-DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
L LG+ + E D + L N+Y+ W E + MK + L
Sbjct: 651 STTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDL 704
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 252/496 (50%), Gaps = 29/496 (5%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y + +C D GK H + +GLE + + NCLINMY +CG L A +F
Sbjct: 28 YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
ERN +SW +L+S+ QCG +F + +S A + ++ ++L ACA +L +G
Sbjct: 88 ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 198 QIHSLVFKCALE----FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
IH+++++ LE V +IN+YAKC L+ A VF I D+ +W+A+ G Y
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207
Query: 254 AQLGK-ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
AQ + +A+ +F +M L P+ +TF LGA +++ G LHSL+ +
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEASLGFD 264
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEM---DEHDVVSWNALIAGHLASCHYGEAIELLKD 369
+N +++ Y KC E + F M E D+VSWNA+I+ + + +G+A+ + +
Sbjct: 265 PLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRR 324
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWG--KQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+ EG PN T ILN + +++G + H I + G+ +VVIG+A++ MYAKC
Sbjct: 325 LRLEGMRPNSVTLITILNALA-ASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKC 383
Query: 428 GRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
G + A VF + K +++SWNTML + + + M I PN +FI +
Sbjct: 384 GFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAI 443
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS-----VVHLFACRGQTRRAYEFIKS 541
L+AC + ++ G +S+I ++ R D++ S +V ++ G A K
Sbjct: 444 LNACSNSEALDFG-RKIHSLI----LTRRRDYVESSVATMLVSMYGKCGSISEAELVFKE 498
Query: 542 SPIEPNK--VVWRCLL 555
P+ P++ V W +L
Sbjct: 499 MPL-PSRSLVTWNVML 513
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 113/275 (41%), Gaps = 45/275 (16%)
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+L Y+ +L D + GK H I G + ++ +G+ L++MY +CG L +A +F
Sbjct: 24 DLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSAC------ 490
+ +N+VSW ++ AQ G A ++ +M+ E+ PN T + +L+AC
Sbjct: 84 SKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143
Query: 491 -----VHIGLVEEGWHYF--------NSMIR--------DHGIS-----PRMDHIASVVH 524
+H + E G N+MI + I+ P D + S
Sbjct: 144 AIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKD-VVSWTA 202
Query: 525 LFACRGQTRRAY-------EFIKSSPIEPNKVVWRCLLSGCKTHKDLV-LGRYAAEKILS 576
+ Q RR Y + P+ PN + + L C + +D L E L
Sbjct: 203 MAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEASLG 262
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
DP ++A I N+Y + W+ V K M +
Sbjct: 263 FDPLASNALI---NMYGKCGDWEGAYSVFKAMASR 294
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 192/573 (33%), Positives = 297/573 (51%), Gaps = 5/573 (0%)
Query: 95 GKEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
G+ IH + R+ + L S +SN L+NMY K LL+SAQ V + R ++W SL+S
Sbjct: 25 GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCV 84
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
+ L F R+ V ++F+ V A A + G QIH L K + +D F
Sbjct: 85 HNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVF 144
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
V ++Y K A +F + +L W+A I Q ++ +AI F +
Sbjct: 145 VGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVH 204
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
P+ +TF L A D+ GRQLH+ I++ G+ VAN ++DFY KC + +
Sbjct: 205 GEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAE 264
Query: 334 KTFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
F+ + + +VVSW +++A L H E ++ + P + S++L+ +++
Sbjct: 265 MVFNRIGNRKNVVSWCSMLAA-LVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAEL 323
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+E G+ H VK + N+ +GSALVDMY KCG + +A +VF L +NLV+WN M+
Sbjct: 324 GGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMI 383
Query: 453 VGYAQHGLGREALEIYSMMQ--ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
GYA G AL ++ M + I+P+ T I +LS C +G VE G F SM ++
Sbjct: 384 GGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNY 443
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYA 570
GI P +H A VV L G RAYEFI++ I+P VW LL C+ H LG+ A
Sbjct: 444 GIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIA 503
Query: 571 AEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHY 630
AEK+ D D+ H++LSN+ A A W+E VRK MK+ +KK+ G SW ++N++H
Sbjct: 504 AEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHV 563
Query: 631 FSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
F + + ++ ++ +L + + GYVPD
Sbjct: 564 FQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPD 596
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 186/363 (51%), Gaps = 13/363 (3%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY K DA +FDEMP+RN+ +W+A IS Q A+ F+ +C EPN T
Sbjct: 152 MYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSIT 211
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
+ ++AC G+++H + R G + + V+N LI+ YGKCG + SA+ VF+
Sbjct: 212 FCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIG 271
Query: 139 ER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
R N +SW S+L++ Q E +FL +RK V ++F +SVL ACA LG L++G
Sbjct: 272 NRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGR 330
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
+H+L K +E + FV L+++Y KC ++ A +VFS + +L W+A+IGGYA G
Sbjct: 331 SVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQG 390
Query: 258 KACEAIDLFVKMF--SSGLMPSEVTFSYVLGAFADVKETIGGRQL-HSLIIKMGFSSFTF 314
A+ LF +M S G+ PS VT +L + V G Q+ S+ + G
Sbjct: 391 DIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAE 450
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVS-WNALIAGHLASCHYGEAIELLK---DM 370
V+D + L++ + + M +S W AL L +C EL K +
Sbjct: 451 HFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGAL----LGACRMHGKTELGKIAAEK 506
Query: 371 LFE 373
LFE
Sbjct: 507 LFE 509
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 221/471 (46%), Gaps = 29/471 (6%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
NHL+ MY K +N AQ + R V++W++LISG AL +F M ++
Sbjct: 46 NHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQ 105
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN +T+ A A +GK+IHG + G+ + V +MY K G A +
Sbjct: 106 PNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNM 165
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA----------SV 183
FD +RN +W + +S+ Q + + VA EF C +
Sbjct: 166 FDEMPQRNLATWNAYISNAVQDRRSLDAI----------VAFKEFLCVHGEPNSITFCAF 215
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI-QLPD 242
L AC + L +G Q+H+ + +C + D VA GLI+ Y KC + A VF+ I +
Sbjct: 216 LNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKN 275
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ +W +++ Q + A +F++ + P++ S VL A A++ GR +H+
Sbjct: 276 VVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHA 334
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
L +K FV + ++D Y KC +E + + F E+ E ++V+WNA+I G+
Sbjct: 335 LAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDM 394
Query: 363 AIELLKDMLFEGHC--PNLYTYSNILNISSDIPAIEWGKQTHCCI-VKPGFDSNVVIGSA 419
A+ L ++M H P+ T +IL++ S + A+E G Q + + G + +
Sbjct: 395 ALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFAC 454
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG---LGREALE 466
+VD+ + G ++ A + +++ + +S W +L HG LG+ A E
Sbjct: 455 VVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAE 505
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N+ + L+ MY K I +A+++F E+PERN+++W+A+I G++ G ++AL F M
Sbjct: 344 NIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMT 403
Query: 69 CCV--LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINMYGKCG 125
+ P+Y T + +S C+ G G +I M + G+E + C++++ G+ G
Sbjct: 404 LGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSG 463
Query: 126 LLSSA-QFVFDASLERNSISWVSLLSS 151
L+ A +F+ + +++ W +LL +
Sbjct: 464 LVDRAYEFIQNMAIQPTISVWGALLGA 490
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 195/667 (29%), Positives = 334/667 (50%), Gaps = 14/667 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEVALN 62
SG+ +V+ N ++ MY K + A +F + + +VISW+ ++ +N
Sbjct: 364 SGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVN 423
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGR-MYRSGLELNSHVSNCLINMY 121
F M+ ++PN +++ ++AC++ G++IH + R + S V+ L++MY
Sbjct: 424 TFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMY 483
Query: 122 GKCGLLSSAQFVFDASL--ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
GKCG ++ A+ VF R+ ++W +L +Y Q + + GV S
Sbjct: 484 GKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALS 543
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA---MGLINLYAKCEKLDLASRVFS 236
SVL +C Q ++ C LE A LI+++ +C +L+ A VF
Sbjct: 544 FTSVLSSCYC-------SQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFD 596
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ D+ +W+A++ A+ E LF +M G++P + T + L D
Sbjct: 597 EMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGL 656
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+ +H+ + ++G + V N +L+ YS C E+L F+ M D+VSWN + A +
Sbjct: 657 GKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQ 716
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ EA+ L + M EG P+ T+S LN+S + GK H + G DS+V +
Sbjct: 717 AGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSV 776
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+ LV +YAKCG+L++A +F +V N ++ AQHG EA++++ MQ+ +
Sbjct: 777 ATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGV 836
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
+P+ T + ++SAC H G+VEEG F +M GISP ++H A V L GQ A
Sbjct: 837 RPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAE 896
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+ I+ P E N +VW LL CK D LG A++IL DP +++AH++LSN+Y
Sbjct: 897 QIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATG 956
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W + RK + ++++K G SW E+ ++H F + Q +++ V+++L + +
Sbjct: 957 KWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMR 1016
Query: 657 DGGYVPD 663
GY D
Sbjct: 1017 RAGYEAD 1023
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 188/654 (28%), Positives = 302/654 (46%), Gaps = 47/654 (7%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G ++ N L+ MYV+ + +A +F +M ERNV+SW+ALIS +Q G A
Sbjct: 54 AGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFAL 113
Query: 64 FRLMVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH----VSNCLI 118
FR M+ PN YT V ++ACA+ D G+ IH ++ GLE S V N +I
Sbjct: 114 FRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMI 173
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE-HVHGLKIFLLSRKSGVAISE 177
NMY KCG A VF E++ +SW ++ +Y Q + L+IF +A +
Sbjct: 174 NMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNV 233
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ + LGAC +L+ G +HSL+ + L FD LIN+Y KC + A VF
Sbjct: 234 ITFITALGACT---SLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKA 290
Query: 238 I---QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
+ Q DL +W+A+I + G+ +A+ +F ++ G+ P+ VT +L A A
Sbjct: 291 MASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVD 350
Query: 295 IG-GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIA 352
G R+ H I + G+ V N ++ Y+KC + F + + DV+SWN ++
Sbjct: 351 FGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLG 410
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD- 411
+G+ + ML G PN ++ ILN S+ A+++G++ H I+ D
Sbjct: 411 ASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY 470
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDH--LSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ + LV MY KCG + +A VF L S++LV+WN ML YAQ+ +EA
Sbjct: 471 VESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALM 530
Query: 470 MMQENKIKPNDNTFIGVLSAC--------VHIGLVEEGWHYF---NSMIRDHG------- 511
M + + P+ +F VLS+C + + ++E G+ ++I HG
Sbjct: 531 EMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQ 590
Query: 512 ---ISPRMDH--IASVVHLFACRGQTRRAYEF------IKSSPIEPNKVVWRCLLSGCKT 560
+ MDH + S + + + R E ++ + P+K L C
Sbjct: 591 ARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLD 650
Query: 561 HKDLVLGRYAAEKILSTDPE-DTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
L LG+ + E D + L N+Y+ W E + MK + L
Sbjct: 651 STTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDL 704
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 150/496 (30%), Positives = 252/496 (50%), Gaps = 29/496 (5%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y + +C D GK H + +GLE + + NCLINMY +CG L A +F
Sbjct: 28 YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
ERN +SW +L+S+ Q G +F + +S A + ++ ++L ACA +L +G
Sbjct: 88 ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 198 QIHSLVFKCALEFDK----FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
IH+++++ LE + V +IN+YAKC + A VF I D+ +W+A+ G Y
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207
Query: 254 AQLGK-ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
AQ + +A+ +F +M L P+ +TF LGA +++ G LHSL+ + G
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEAGLGFD 264
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEM---DEHDVVSWNALIAGHLASCHYGEAIELLKD 369
N +++ Y KC E + F M E D+VSWNA+I+ + + +G+A+ + +
Sbjct: 265 PLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRR 324
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWG--KQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+ EG PN T ILN + +++G ++ H I + G+ +VV+G+A++ MYAKC
Sbjct: 325 LRLEGMRPNSVTLITILNALA-ASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKC 383
Query: 428 GRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
G + A VF + K +++SWNTML + + + M I PN +FI +
Sbjct: 384 GFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAI 443
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS-----VVHLFACRGQTRRAYEFIKS 541
L+AC + ++ G +S+I ++ R D++ S +V ++ G A K
Sbjct: 444 LNACSNSEALDFG-RKIHSLI----LTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKE 498
Query: 542 SPIEPNK--VVWRCLL 555
P+ P++ V W +L
Sbjct: 499 MPL-PSRSLVTWNVML 513
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 115/275 (41%), Gaps = 45/275 (16%)
Query: 378 NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF 437
+L Y+ +L D + GK+ H I G + ++ +G+ L++MY +CG L +A +F
Sbjct: 24 DLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 438 DHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVH---- 492
+ +N+VSW ++ AQ G A ++ +M+ E+ PN T + +L+AC +
Sbjct: 84 SKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143
Query: 493 ------------IGLVEEGWHYF---NSMIRDHGI--SPRMDHIA--------SVVHLFA 527
+GL E N+MI + SP D IA VV A
Sbjct: 144 AIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPE-DAIAVFLTIPEKDVVSWTA 202
Query: 528 CRG---QTRRAY-------EFIKSSPIEPNKVVWRCLLSGCKTHKDLV-LGRYAAEKILS 576
G Q RR Y + P+ PN + + L C + +D L E L
Sbjct: 203 MAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGLG 262
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
DP +A I N+Y + W+ V K M +
Sbjct: 263 FDPLAGNALI---NMYGKCGDWEGAYGVFKAMASR 294
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 178/585 (30%), Positives = 314/585 (53%), Gaps = 4/585 (0%)
Query: 83 VSACASRGDARSGKEIHGRMY---RSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
+ CA+ R G+ IH + +S +++ N LIN+Y KC A+ +FD E
Sbjct: 38 LKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPE 97
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA-ISEFSCASVLGACAVLGNLKVGMQ 198
RN +SW +++ Y G LK+F SG + +EF V +C+ G ++ G Q
Sbjct: 98 RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ 157
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
H K L +FV L+ +Y+ C A RV ++ DL+ +S+ + GY + G
Sbjct: 158 FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGA 217
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
E +D+ K + + + +T+ L F+++++ Q+HS +++ GF++
Sbjct: 218 FKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGA 277
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+++ Y KC + + + FD+ ++ ++ + + EA+ L M + PN
Sbjct: 278 LINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPN 337
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
YT++ +LN +++ ++ G H ++K G+ ++V++G+ALV+MYAK G + DARK F
Sbjct: 338 EYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFS 397
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
++ +++V+WNTM+ G + HGLGREALE + M PN TFIGVL AC HIG VE+
Sbjct: 398 GMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQ 457
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
G HYFN +++ + P + H +V L + G + A +F++++PIE + V WR LL+ C
Sbjct: 458 GLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNAC 517
Query: 559 KTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTG 618
++ LG+ AE + P D+ +++LSN++A++ W+ AKVR +M + +KK+ G
Sbjct: 518 YVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPG 577
Query: 619 CSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
SW ++N+ H F + ++ + ++ + GY PD
Sbjct: 578 VSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPD 622
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 147/510 (28%), Positives = 242/510 (47%), Gaps = 21/510 (4%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC-VL 72
N L+ +YVK A+KLFD MPERNV+SW A++ G+ G L F+ M
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
PN + +C++ G GK+ HG + GL + V N L+ MY C A
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
V D + + S LS Y +CG GL + + + + S L + L +
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L + +Q+HS + + + LIN+Y KC K+ A RVF + ++ + ++
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y Q EA++LF KM + + P+E TF+ +L + A++ G LH L++K G+ +
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNH 372
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG---EAIELLKD 369
V N +++ Y+K +E++ K F M D+V+WN +I+G H+G EA+E
Sbjct: 373 VMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISG---CSHHGLGREALEAFDR 429
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--SALVDMYAKC 427
M+F G PN T+ +L S I +E G ++K FD I + +V + +K
Sbjct: 430 MIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKK-FDVQPDIQHYTCIVGLLSKA 488
Query: 428 GRLNDARKVFDHLSSK-NLVSWNTMLVG---YAQHGLGREALEIYSMMQENKIKPNDNTF 483
G DA + ++V+W T+L + LG++ E Y++ + PND+
Sbjct: 489 GMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAE-YAIEK----YPNDSG- 542
Query: 484 IGVLSACVHIGLVE-EGWHYFNSMIRDHGI 512
+ VL + +H E EG S++ + G+
Sbjct: 543 VYVLLSNIHAKSREWEGVAKVRSLMNNRGV 572
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 2/254 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M+ GF+ V L+ MY K ++ AQ++FD+ +N+ + ++ + Q E A
Sbjct: 263 MVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEA 322
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
LN F M + PN YT+ +++ A + G +HG + +SG + V N L+NM
Sbjct: 323 LNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNM 382
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+ F R+ ++W +++S G L+ F +G + +
Sbjct: 383 YAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITF 442
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
VL AC+ +G ++ G+ + L+ K ++ D ++ L +K A
Sbjct: 443 IGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAP 502
Query: 240 LP-DLTAWSALIGG 252
+ D+ AW L+
Sbjct: 503 IEWDVVAWRTLLNA 516
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 170/483 (35%), Positives = 278/483 (57%), Gaps = 2/483 (0%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L C ++ G ++H+ + K +++ LI LY KCE L A VF ++ +
Sbjct: 16 LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERN 75
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ +W+A+I GY+Q G A EA+ LFV+M S P+E TF+ VL + GRQ+HS
Sbjct: 76 VVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHS 135
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
I K + + FV +++LD Y+K + E+ F+ + E DVVS A+I+G+ E
Sbjct: 136 HIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEE 195
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+EL + EG N TY+++L S + A++ GKQ H +++ VV+ ++L+D
Sbjct: 196 ALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLID 255
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM-QENKIKPNDN 481
MY+KCG LN ARK+F+++ + ++SWN MLVGY++HG G E ++++ +M +ENK+KP+
Sbjct: 256 MYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSV 315
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIR-DHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ VLS C H GL ++G F+ M+ I ++H V+ L G+ A+E IK
Sbjct: 316 TFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIK 375
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
P EP +W LL C+ H + +G + ++L +PE+ +++LSN+YA A W++
Sbjct: 376 KMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWED 435
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
VR++M EK++ K+ G SW EL +H F S + + ++ + +L V + GY
Sbjct: 436 VRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGY 495
Query: 661 VPD 663
VPD
Sbjct: 496 VPD 498
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 221/449 (49%), Gaps = 38/449 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + + P V L+++Y K + A+ +FDEM ERNV+SW+A+ISG+SQ G A
Sbjct: 36 MIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEA 95
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ EPN +T+ +S+C G++IH +++ E + V + L++M
Sbjct: 96 LHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDM 155
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+ VF+ ER+ +S +++S Y Q G L++F ++ G++ + +
Sbjct: 156 YAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTY 215
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L A + L L G Q+HS V +C L F + LI++Y+KC L+ A ++F+N+ +
Sbjct: 216 ASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPV 275
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+A++ GY++ GK E + LF M + P VTF VL + GG +
Sbjct: 276 RTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSH-----GGLE 330
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
L E+ +E + DE+ E + + +I +
Sbjct: 331 DKGL-----------------------EMFDEMMNGGDEI-EAGIEHYGCVIDLLGRAGR 366
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI--VKPGFDSNVVIG 417
EA EL+K M FE P + ++L G+ C + ++P N VI
Sbjct: 367 VEEAFELIKKMPFE---PTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVI- 422
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLV 446
L ++YA GR D R V + + K ++
Sbjct: 423 --LSNLYASAGRWEDVRNVRELMMEKAVI 449
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 198/384 (51%), Gaps = 4/384 (1%)
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
E + Y ++ C ++ R G+ +H M ++ ++S LI +Y KC L A+
Sbjct: 7 EIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARH 66
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
VFD ERN +SW +++S Y Q G L +F+ +S +EF+ A+VL +C
Sbjct: 67 VFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSG 126
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
++G QIHS +FK E FV L+++YAK ++ A VF + D+ + +A+I G
Sbjct: 127 FELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISG 186
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
YAQLG EA++LF ++ G+ + VT++ +L A + + G+Q+HS +++ +
Sbjct: 187 YAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFY 246
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+ N+++D YSKC L + K F+ M V+SWNA++ G+ E ++L K M
Sbjct: 247 VVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMRE 306
Query: 373 EGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG--FDSNVVIGSALVDMYAKCGR 429
E P+ T+ +L+ S + G + ++ G ++ + ++D+ + GR
Sbjct: 307 ENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGR 366
Query: 430 LNDARKVFDHLSSKNLVS-WNTML 452
+ +A ++ + + + W ++L
Sbjct: 367 VEEAFELIKKMPFEPTAAIWGSLL 390
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y+ +LN + A+ G++ H ++K + V + + L+ +Y KC L AR VFD +
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW- 500
+N+VSW M+ GY+Q G EAL ++ M + +PN+ TF VLS+C E G
Sbjct: 73 ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132
Query: 501 ---HYFNSMIRDH 510
H F +H
Sbjct: 133 IHSHIFKRNYENH 145
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 171/605 (28%), Positives = 317/605 (52%), Gaps = 33/605 (5%)
Query: 92 ARSGKEIHGR-MYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
A+SG+ R ++ + N N L++ L+ + +F + ER+++S+ +L++
Sbjct: 59 AKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALIT 118
Query: 151 SYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ G ++++ L R+ V + + ++++ + L + +G +H V +
Sbjct: 119 GFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFG 178
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLP---------------------------- 241
FV L+++YAK + A RVF ++
Sbjct: 179 AYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLM 238
Query: 242 ---DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D W+ ++ G Q G EA+D+F +M + G+ + TF +L A + + G+
Sbjct: 239 VDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGK 298
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+ I + + FV + ++D YSKC + + F M +++SW A+I G+ +
Sbjct: 299 QIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNA 358
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA+ +M +G P+ +T ++++ +++ ++E G Q HC + G + + +
Sbjct: 359 CSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSN 418
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALV +Y KCG + DA ++FD +S + VSW ++ GYAQ G +E ++++ M N +KP
Sbjct: 419 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKP 478
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TFIGVLSAC GLVE+G YF+SM +DH I P DH ++ L++ G+ + A EF
Sbjct: 479 DGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEF 538
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
IK P P+ W LLS C+ ++ +G++AAE +L TDP++ +++++L +++A W
Sbjct: 539 IKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQW 598
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
E A +R+ M+++ +KK+ GCSW + +NK+H FS + ++E + L+ + +
Sbjct: 599 TEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEE 658
Query: 659 GYVPD 663
GY PD
Sbjct: 659 GYKPD 663
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 234/482 (48%), Gaps = 40/482 (8%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR-L 66
PN+ T N LL + D ++LF MPER+ +S++ALI+GFS G P ++ +R L
Sbjct: 77 PNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRAL 136
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
+ + P T + ++ D G +H ++ R G + V + L++MY K GL
Sbjct: 137 LREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGL 196
Query: 127 LSSAQFVF-------------------------DAS------LERNSISWVSLLSSYCQC 155
+ A+ VF DA ++R+SI+W ++++ Q
Sbjct: 197 IRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQN 256
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G + L +F R GV I +++ S+L AC L + G QIH+ + + E + FV
Sbjct: 257 GLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVG 316
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L+++Y+KC + LA VF + ++ +W+A+I GY Q + EA+ F +M G+
Sbjct: 317 SALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK 376
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P + T V+ + A++ G Q H L + G + V+N ++ Y KC +E++ +
Sbjct: 377 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRL 436
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
FDEM HD VSW AL+ G+ E I+L + ML G P+ T+ +L+ S +
Sbjct: 437 FDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLV 496
Query: 396 EWGKQTHCCIVKPGFDSNVVI----GSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNT 450
E G + K D ++V + ++D+Y++ GR +A + + S + W T
Sbjct: 497 EKGCDYFDSMQK---DHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553
Query: 451 ML 452
+L
Sbjct: 554 LL 555
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 186/384 (48%), Gaps = 43/384 (11%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
V+ YN L+ ++ I DA+ LF M +R+ I+W+ +++G +Q G+ AL+ FR M
Sbjct: 211 TVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMR 270
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ + YT+ ++AC + + GK+IH + R+ E N V + L++MY KC +
Sbjct: 271 AEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIR 330
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ VF RN ISW +++ Y Q ++ F + G+ +F+ SV+ +CA
Sbjct: 331 LAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCA 390
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L +L+ G Q H L L V+ L+ LY KC ++ A R+F + D +W+A
Sbjct: 391 NLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTA 450
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
L+ GYAQ GKA E IDLF KM +GL P VTF VL A
Sbjct: 451 LVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSAC-------------------- 490
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVS----WNALIAGHLASCHYGEA 363
S+ L+E+ FD M +HD+V + +I + S + EA
Sbjct: 491 ---------------SRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEA 535
Query: 364 IELLKDMLFEGHCPNLYTYSNILN 387
E +K M H P+ + ++ +L+
Sbjct: 536 EEFIKQM---PHSPDAFGWATLLS 556
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 205/445 (46%), Gaps = 71/445 (15%)
Query: 181 ASVLGACAVLGN---LKVGMQIHSLVFKCALEFDK-FVAMGLINLYAKCEKLDLASRVFS 236
A++L + A G ++V +H L+ K L+ F+ L+ YAK +L A RVF
Sbjct: 13 AAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFD 72
Query: 237 NIQLPDL-------------------------------TAWSALIGGYAQLGKACEAIDL 265
+ P+L +++ALI G++ G ++ L
Sbjct: 73 EMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQL 132
Query: 266 FVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
+ + + P+ +T S ++ + + + G +H ++++GF ++ FV + ++D Y+
Sbjct: 133 YRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYA 192
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY------------------------ 360
K L+ ++ + F EM+ VV +N LI G L C
Sbjct: 193 KMGLIRDARRVFQEMEAKTVVMYNTLITG-LLRCKMIEDAKGLFQLMVDRDSITWTTMVT 251
Query: 361 --------GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
EA+++ + M EG + YT+ +IL + A E GKQ H I + ++
Sbjct: 252 GLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYED 311
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
NV +GSALVDMY+KC + A VF ++ +N++SW M+VGY Q+ EA+ +S MQ
Sbjct: 312 NVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQ 371
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+ IKP+D T V+S+C ++ +EEG F+ + G+ + ++V L+ G
Sbjct: 372 MDGIKPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSI 430
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSG 557
A+ ++V W L++G
Sbjct: 431 EDAHRLFDEMSFH-DQVSWTALVTG 454
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 124/266 (46%), Gaps = 19/266 (7%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
+ NV + L+ MY K I A+ +F M RN+ISW+A+I G+ Q E A+ F
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFS 368
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M ++P+ +T +S+CA+ G + H SGL VSN L+ +YGKCG
Sbjct: 369 EMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ A +FD + +SW +L++ Y Q G+ + +F +G+ + VL
Sbjct: 429 SIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLS 488
Query: 186 ACAVLGNLKVG-------MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
AC+ G ++ G + H +V ++ D + M I+LY++ + A +
Sbjct: 489 ACSRAGLVEKGCDYFDSMQKDHDIV---PID-DHYTCM--IDLYSRSGRFKEAEEFIKQM 542
Query: 239 -QLPDLTAWSALIG-----GYAQLGK 258
PD W+ L+ G ++GK
Sbjct: 543 PHSPDAFGWATLLSSCRLRGNMEIGK 568
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG + N L+ +Y K I DA +LFDEM + +SW+AL++G++Q G + +
Sbjct: 406 LVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETI 465
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG--LELNSHVSNCLIN 119
+ F M+ L+P+ T++G +SAC+ G G + M + + ++ H + C+I+
Sbjct: 466 DLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYT-CMID 524
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+Y + G A +F+ ++ W +LLSS
Sbjct: 525 LYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Vitis vinifera]
Length = 882
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 205/693 (29%), Positives = 347/693 (50%), Gaps = 38/693 (5%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L++ Y+K + +A K+F + NV+S++A+ISGF++ A+ F M +E
Sbjct: 109 NALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIE 168
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N +++V ++ C D G ++H + + G + VSN L+ +YGKCG L S +
Sbjct: 169 LNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQL 228
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGN 192
FD R+ SW +++SS + + ++F + R G I F+ +++L A L +
Sbjct: 229 FDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLAS 288
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC----------EKL-------------- 228
+ VG +IH+ V K E + V LI Y KC EK+
Sbjct: 289 M-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITA 347
Query: 229 -------DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTF 281
DLA VF + + +++A++ G+ Q G+ +A+ F +M G+ ++ T
Sbjct: 348 YMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTL 407
Query: 282 SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK--TFDEM 339
+ VL A + E +Q+H I+K GF S + +LD ++C + ++ K +
Sbjct: 408 TGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSF 467
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH-CPNLYTYSNILNISSDIPAIEWG 398
+ + W ++I G+ + EAI L EG + + +L + + E G
Sbjct: 468 SQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMG 527
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
KQ HC +K GF S++ +G++++ MY+KC ++DA KVF+ + + ++VSWN ++ G+ H
Sbjct: 528 KQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLH 587
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG--LVEEGWHYFNSMIRDHGISPRM 516
G EAL ++S M++ IKP+ TF+ ++SA H LV+ F SM + I P +
Sbjct: 588 RQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTV 647
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
+H S+V + G A E I PIEP VWR LL C+ H + +G+ AA+ +L+
Sbjct: 648 EHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLA 707
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRF 636
P D S +I++SN+Y+ W + VR+ M+ K +K G SW +NK+H F
Sbjct: 708 MKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDK 767
Query: 637 AQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ Q D+H + L + GYVPD + H
Sbjct: 768 SHPQAKDIHSGLELLIMECLKAGYVPDTSFVLH 800
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 157/527 (29%), Positives = 240/527 (45%), Gaps = 71/527 (13%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF N L+ +Y K ++ +LFDEMP R++ SW+ +IS + M E A
Sbjct: 197 VIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERA 256
Query: 61 LNYFRLMVCCV-LEPNYYTYVGAVSACASRGDAR-SGKEIHGRMYRSGLELNSHVSNCLI 118
FR M +++T + A+RG A G+EIH + + G E N V N LI
Sbjct: 257 FELFRDMRRIDGFRIDHFTL--STILVAARGLASMVGREIHAHVIKIGFESNISVINALI 314
Query: 119 NMYGKC-------------------------------GLLSSAQFVFDASLERNSISWVS 147
Y KC GL A VFD RNSIS+ +
Sbjct: 315 RFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNA 374
Query: 148 LLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
+LS +CQ GE L F + GV +++F+ VL AC +L K+ QIH + K
Sbjct: 375 ILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFG 434
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA--WSALIGGYAQLGKACEAIDL 265
+ + L+++ +C ++ A ++FS + W+++I GYA+ + EAI L
Sbjct: 435 FGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISL 494
Query: 266 FVK-MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
F + ++ +V + VLG + G+Q+H +K GF S V N+++ YS
Sbjct: 495 FCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYS 554
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
KC +++++K F+ M HD+VSWN LIAGHL EA+ + M G P+ T+
Sbjct: 555 KCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTF-- 612
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
+L IS+ + T+ S LVD C RL + K H+
Sbjct: 613 VLIISA-------YRHTN---------------SNLVD---NCRRLFLSMKTIYHIDPT- 646
Query: 445 LVSWNTMLVGYAQH-GLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
V T LVG + GL EA E M+ + I+P + + +L AC
Sbjct: 647 -VEHYTSLVGVLGYWGLLEEAEE---MINKMPIEPEASVWRALLDAC 689
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 139/548 (25%), Positives = 246/548 (44%), Gaps = 53/548 (9%)
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
D K +H +++ L + H++N LI Y K G++ +A VF N +S+ +++S
Sbjct: 87 DVELIKAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMIS 144
Query: 151 SYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF 210
+ + ++IF R SG+ ++EFS ++L C L +L++G Q+H++V K
Sbjct: 145 GFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLN 204
Query: 211 DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF 270
FV+ L+ LY KC LD ++F + D+ +W+ +I + A +LF M
Sbjct: 205 YTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMR 264
Query: 271 S-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
G T S +L A + + GR++H+ +IK+GF S V N ++ FY+KC +
Sbjct: 265 RIDGFRIDHFTLSTILVAARGLASMV-GREIHAHVIKIGFESNISVINALIRFYTKCGSI 323
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM----------LFEGHCPN- 378
+ + F++M DV++W +I ++ A+E+ M + G C N
Sbjct: 324 KHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNG 383
Query: 379 --------------------LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+T + +LN + + KQ H I+K GF SN I +
Sbjct: 384 EGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEA 443
Query: 419 ALVDMYAKCGRLNDARKV--FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ-ENK 475
AL+DM +CGR+ DA+K+ S + W +M+ GYA++ EA+ ++ Q E
Sbjct: 444 ALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGA 503
Query: 476 IKPNDNTFIGVLSACVHIGLVEEG----WHYFNS-MIRDHGISPRMDHIASVVHLFACRG 530
+ + VL C + E G H S + D G+ S++ +++
Sbjct: 504 MVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVG------NSIITMYSKCS 557
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK--DLVLGRYAAEKILSTDPEDTSAHIML 588
A + P + V W L++G H+ D L ++ + P DT +++
Sbjct: 558 NMDDAIKVFNVMPAH-DIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKP-DTVTFVLI 615
Query: 589 SNVYAEAN 596
+ Y N
Sbjct: 616 ISAYRHTN 623
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 182/556 (32%), Positives = 304/556 (54%), Gaps = 4/556 (0%)
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
+ N LI+ Y KCG + A+ VFD R+ ++W S+++SY + G + I+ G
Sbjct: 112 LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDG 171
Query: 173 VAISEFSCASVLGACAVLGNLKVGMQIH--SLVFKCALEFDKFVAMGLINLYAKCEKLDL 230
+ EF+ +SV A + LG + G + H S+V + + FV L+++YAK K+
Sbjct: 172 ILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVS-NVFVGSALVDMYAKFGKMRD 230
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
A V + D+ ++ALI GY+ G+ E++ +F M G+ +E T S VL +
Sbjct: 231 ARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGN 290
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+++ GR +H LI+K G S ++L Y +C L+++SLK F + + V+W ++
Sbjct: 291 LEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSV 350
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
I G + + A+ + ML PN +T S++L S + +E GKQ H ++K G
Sbjct: 351 IVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGL 410
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
D + +G+AL+D Y KCG AR VF+ L ++VS N+M+ YAQ+G G EAL+++S
Sbjct: 411 DIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSG 470
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M++ ++PN+ T++GVLSAC + GL+EEG H F+S I DH A +V L G
Sbjct: 471 MKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAG 530
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN 590
+ + A I I + V+WR LLS C+ H D+ + + +++ PED H++LSN
Sbjct: 531 RLKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSN 589
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQ 650
+YA W + +++ M+E LKK+ SW +++ ++H F ++ D+ E + +
Sbjct: 590 LYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEE 649
Query: 651 LSVHLFDGGYVPDPIY 666
L + + GYVPD +
Sbjct: 650 LIEKVKELGYVPDTRF 665
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 239/464 (51%), Gaps = 12/464 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ GFH ++ N L+ Y+K + A+K+FDE+P R++++W+++I+ + + G + A+
Sbjct: 104 LKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAI 161
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL-NSHVSNCLINM 120
+ ++ MV + P+ +T+ A + G G+ HG+ G+ + N V + L++M
Sbjct: 162 DIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDM 221
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+ V D + ++ + + +L+ Y GE L++F K G+ +E++
Sbjct: 222 YAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTL 281
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+SVL C L +L G IH L+ K LE L+ +Y +C +D + +VF
Sbjct: 282 SSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFIN 341
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
P+ W+++I G Q G+ A+ F +M S + P+ T S VL A + + G+Q+
Sbjct: 342 PNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQI 401
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H++++K G +V ++DFY KC E + F+ + E DVVS N++I + +
Sbjct: 402 HAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFG 461
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS-NVVIG-- 417
EA++L M G PN T+ +L+ ++ +E G C I +S N+ +
Sbjct: 462 HEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEG----CHIFSSARNSGNIELTKD 517
Query: 418 --SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHG 459
+ +VD+ + GRL +A + + ++ ++V W T+L HG
Sbjct: 518 HYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHG 561
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 185/364 (50%), Gaps = 5/364 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
NV + L+ MY KF ++ DA+ + D++ ++V+ ++ALI G+S G +L FR M
Sbjct: 211 NVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMT 270
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+E N YT + C + D SG+ IHG + ++GLE L+ MY +CGL+
Sbjct: 271 KKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVD 330
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+ VF + N ++W S++ Q G L F +S + + F+ +SVL AC+
Sbjct: 331 DSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACS 390
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L L+ G QIH++V K L+ DK+V LI+ Y KC ++A VF+ + D+ + ++
Sbjct: 391 SLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNS 450
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I YAQ G EA+ LF M +GL P+ VT+ VL A + G + S G
Sbjct: 451 MIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSG 510
Query: 309 FSSFTFVANT-VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
T ++D + L+E+ ++++ DVV W L L++C +E+
Sbjct: 511 NIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTL----LSACRIHGDVEMA 566
Query: 368 KDML 371
K ++
Sbjct: 567 KRVM 570
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 127/251 (50%), Gaps = 1/251 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G V + LL MY + ++D+ K+F + N ++W+++I G Q G E+A
Sbjct: 304 IVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIA 363
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M+ + PN +T + AC+S GK+IH + + GL+++ +V LI+
Sbjct: 364 LLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDF 423
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG A+ VF+ LE + +S S++ SY Q G L++F + +G+ + +
Sbjct: 424 YGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTW 483
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
VL AC G L+ G I S +E K +++L + +L A + + +
Sbjct: 484 LGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVN 543
Query: 240 LPDLTAWSALI 250
+ D+ W L+
Sbjct: 544 ISDVVIWRTLL 554
>gi|77553408|gb|ABA96204.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 887
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/631 (30%), Positives = 324/631 (51%), Gaps = 8/631 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G N + LLLMY K RI AQ+ F + +++ W+A++ G+ G A+
Sbjct: 120 VRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAI 179
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ +M L P+ YTY+ AV AC+ G+++H + S LE N+ V N L++MY
Sbjct: 180 STVLVMHHSGLAPDRYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMY 239
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+ +A VF +++++SW ++ S + + + ++G +E + +
Sbjct: 240 FRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFS 299
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L N +G+QI +L ++ + VA +IN+ +C LD A F ++
Sbjct: 300 VLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFR 359
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+ +I GY + +A+ LF + G P E T+S VL AF + Q+H
Sbjct: 360 NIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIH 419
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKC-ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
++I+K GF+S FV+ +++ + ++ SLK ++ + ++VSW A+I+ L
Sbjct: 420 AIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLN 479
Query: 361 GEAIELLKDMLFEGHC---PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
E I L LF G P+ + + +LN ++ I + H ++K G ++ +
Sbjct: 480 DEVIFLFN--LFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVA 537
Query: 418 SALVDMYAKCGRLNDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
SA+VD YAKCG + A F +SS + + +NTML YA HGL EAL +Y M + K
Sbjct: 538 SAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAK 597
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+ P TF+ +LSAC H+GLVE+G F++M+ +G+ P + A +V L A +G A
Sbjct: 598 LNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEA 657
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
I + P +P VWR L++GC+ H + LG AAE+IL P A++ LSNVYA+
Sbjct: 658 KGVIDAMPFQPWPAVWRSLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADD 717
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
W + R+ M + +L+K G E N
Sbjct: 718 GEWQSAEETRRRMVQNNLQKVHGYVALEYAN 748
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 146/556 (26%), Positives = 271/556 (48%), Gaps = 9/556 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N+L + Y + ++ A K+FDEMP RN++SW+A++S ++ G P + +F M+
Sbjct: 26 NYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFC 85
Query: 74 PNYYTYVGAVSACASRGDARSGK-----EIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
PN ++ ++AC S S K +HG R+GL+ N V + L+ MY K G ++
Sbjct: 86 PNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIA 145
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+AQ F ++ W ++L Y G H + L+ SG+A ++ S + AC+
Sbjct: 146 AAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACS 205
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ +G Q+H LV LE + V L+++Y + + + A+ VF I+ D +W+
Sbjct: 206 ISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNT 265
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+ G+A + M +G P+EVTFS +L + G Q+ +L + G
Sbjct: 266 MFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHG 325
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
++ VAN V++ +C LL+ + F + ++V+WN +IAG+ H +A+ L +
Sbjct: 326 YTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFR 385
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC- 427
++ G P+ +TYS +L+ + +Q H I+K GF S + ++L+ A
Sbjct: 386 SLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAF 445
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ-ENKIKPNDNTFIGV 486
G + + K+ + LVSW ++ + +HGL E + ++++ + ++ KP++ V
Sbjct: 446 GSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATV 505
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFIKSSPIE 545
L+AC + L+ +S++ G S ++VV +A C T F S
Sbjct: 506 LNACANAALIRH-CRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSAT 564
Query: 546 PNKVVWRCLLSGCKTH 561
+ +++ +L+ H
Sbjct: 565 NDAIMYNTMLTAYANH 580
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 210/466 (45%), Gaps = 8/466 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I S N N L+ MY + + A +F ++ +++ +SW+ + SGF+ +
Sbjct: 220 VIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAV 279
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
Y M +PN T+ + ++ +A G +I YR G N V+N +INM
Sbjct: 280 FGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINM 339
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+CGLL A F + RN ++W +++ Y +++F G EF+
Sbjct: 340 LFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTY 399
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC-EKLDLASRVFSNIQ 239
++VL A + QIH+++ K +FV+ LI A + + ++ +
Sbjct: 400 SAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSG 459
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMF--SSGLMPSEVTFSYVLGAFADVKETIGG 297
+L +W A+I + + G E I LF +F S P E + VL A A+
Sbjct: 460 KMELVSWGAIISAFLKHGLNDEVIFLF-NLFRGDSTNKPDEFILATVLNACANAALIRHC 518
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE--HDVVSWNALIAGHL 355
R +HSL++K G S+ VA+ V+D Y+KC + + F + +D + +N ++ +
Sbjct: 519 RCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYA 578
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNV 414
EA+ L ++M P T+ IL+ S + +E GK ++ G
Sbjct: 579 NHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPAR 638
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG 459
+ LVD+ A+ G L++A+ V D + + + W +++ G HG
Sbjct: 639 ANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHG 684
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 286/510 (56%), Gaps = 5/510 (0%)
Query: 158 HVHGLKIFLLSRKSGVAIS--EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
H + L + L R ++++ F+ +CA L +L HSL+FK AL D A
Sbjct: 101 HNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTA 160
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM-FSSGL 274
LI YA+C + A +VF I D +W+++I GYA+ G A EA+++F +M G
Sbjct: 161 HSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGF 220
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
P E++ +LGA ++ + GR + +++ G + +++ + ++ Y+KC LE + +
Sbjct: 221 EPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARR 280
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
FD M DV++WNA+I+G+ + EAI L M + N T + +L+ + I A
Sbjct: 281 IFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGA 340
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
++ GKQ + GF ++ + +AL+DMYAK G L++A++VF + KN SWN M+
Sbjct: 341 LDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISA 400
Query: 455 YAQHGLGREALEIYSMMQENK--IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
A HG +EAL ++ M + +PND TF+G+LSACVH GLV+EG+ F+ M G+
Sbjct: 401 LAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGL 460
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
P+++H + +V L A G A++ I+ P +P+KV LL C++ K++ +G
Sbjct: 461 VPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMR 520
Query: 573 KILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
IL DP ++ +I+ S +YA NMW+++A++R +M++K + K GCSW E++N +H F
Sbjct: 521 MILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFH 580
Query: 633 TSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
IDL +++ L L GYVP
Sbjct: 581 AGDGLCLDSIDLSNIIDLLYEELKREGYVP 610
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 223/451 (49%), Gaps = 13/451 (2%)
Query: 1 MITSGFH-PNVITYNHLLLMYVKFSRINDAQKLFDEM-PERNVISWSALISGFSQI--GM 56
++ S H PN NHLL + + LF + P N +++ +I +
Sbjct: 48 VVNSSIHTPN----NHLLSKAIHLKNFPYSSLLFSHIAPHPNDYAFNIMIRALTTTWHNY 103
Query: 57 PEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
P +AL+ F M+ L P+ +T+ +CA+ H +++ L + H ++
Sbjct: 104 P-LALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHS 162
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAI 175
LI Y +CGL++SA+ VFD R+S+SW S+++ Y + G +++F + R+ G
Sbjct: 163 LITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEP 222
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
E S S+LGAC LG+L++G + V + + + ++ LI++YAKC +L+ A R+F
Sbjct: 223 DEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIF 282
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ D+ W+A+I GYAQ G A EAI LF M + +++T + VL A A +
Sbjct: 283 DGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALD 342
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+Q+ + GF FVA ++D Y+K L+ + + F +M + + SWNA+I+
Sbjct: 343 LGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALA 402
Query: 356 ASCHYGEAIELLKDMLFEGHC--PNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDS 412
A EA+ L + M EG PN T+ +L+ ++ G + + G
Sbjct: 403 AHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVP 462
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+ S +VD+ A+ G L +A + + K
Sbjct: 463 KIEHYSCMVDLLARAGHLYEAWDLIRKMPEK 493
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 173/388 (44%), Gaps = 51/388 (13%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G N + L+ MY K + A+++FD M R+VI+W+A+ISG++Q GM + A
Sbjct: 250 VVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEA 309
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M + N T +SACA+ G GK+I + G + + V+ LI+M
Sbjct: 310 ILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDM 369
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEF 178
Y K G L +AQ VF ++N SW +++S+ G+ L +F + G ++
Sbjct: 370 YAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDI 429
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +L AC G + G ++ D+ S +F +
Sbjct: 430 TFVGLLSACVHAGLVDEGYRL----------------------------FDMMSTLFGLV 461
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
P + +S ++ A+ G EA DL KM P +VT +LGA K G
Sbjct: 462 --PKIEHYSCMVDLLARAGHLYEAWDLIRKMPEK---PDKVTLGALLGACRSKKNVDIGE 516
Query: 299 QLHSLIIKMGFS-SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVV-----SWNALIA 352
++ +I+++ S S ++ ++ + Y+ + E+S + M + + SW +
Sbjct: 517 RVMRMILEVDPSNSGNYIISSKI--YANLNMWEDSARMRLLMRQKGITKTPGCSWIE-VE 573
Query: 353 GHLASCHYGEAIEL-------LKDMLFE 373
HL H G+ + L + D+L+E
Sbjct: 574 NHLHEFHAGDGLCLDSIDLSNIIDLLYE 601
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 196/625 (31%), Positives = 320/625 (51%), Gaps = 34/625 (5%)
Query: 2 ITSGF--HPNVITY-NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPE 58
ITSG PN I +HL + Y + A+KLFD++ + ++ W+A+I + G
Sbjct: 106 ITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHF 165
Query: 59 VALNYFRLMVCC-VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
AL F M+C P+ YT+ + AC+ G IHGR SG N V N L
Sbjct: 166 DALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSL 225
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
+ MY CG + A+ VF+ L+R+ +SW +++S + Q G L +F + V
Sbjct: 226 LAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDS 285
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ S L +C L L++G+++H LV K L+ V L+++Y++C +D AS VF+
Sbjct: 286 ATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAE 345
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ D+ W+++I GY G A A+ L M G++P+ VT + +L A A
Sbjct: 346 TKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACA-------- 397
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
++ Y+KC + S + F + + V WNAL++G + +
Sbjct: 398 --------------------SLCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHN 437
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA+ L K ML E N T+++++ + + ++ H +V+ GF S + +
Sbjct: 438 ELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVI 497
Query: 418 SALVDMYAKCGRLNDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ L+DMY+KCG L+ A K+FD + + K+++ W+ ++ GY HG G A+ +++ M +
Sbjct: 498 TGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSG 557
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
++PN+ TF VL AC H GLV++G F MI ++ SP +H VV L G+ A
Sbjct: 558 MQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEA 617
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
Y+ IKS P + N +W LL C H+++ LG AAE++ +PE T +I+L+N+YA
Sbjct: 618 YDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAV 677
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCS 620
W + VR IM + L+K S
Sbjct: 678 GRWKDAENVRHIMSKIGLRKTPAQS 702
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPE 58
++ SGF + L+ MY K ++ A K+FDE+P E+++I WS LI+G+ G E
Sbjct: 485 LVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGE 544
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS--GLELNSHVSNC 116
A+ F MV ++PN T+ + AC+ RG G + M + L +H + C
Sbjct: 545 TAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYT-C 603
Query: 117 LINMYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
++++ G+ G L A + ++N W +LL +
Sbjct: 604 VVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGA 639
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 192/610 (31%), Positives = 323/610 (52%), Gaps = 42/610 (6%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL------LSSAQFVFDASLERNSISWV 146
+S + IH +M ++GL ++ + LI C L L A VF+ E N + W
Sbjct: 16 QSLRMIHAQMIKTGLHNTNYALSKLIEF---CVLSPHFDGLPYAISVFETIQEPNLLIWN 72
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
++ + + V L +++ G+ + ++ +L +CA + G QIH V K
Sbjct: 73 TMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKL 132
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSN----------------------------- 237
+ D +V LI++Y + +L+ A +VF
Sbjct: 133 GYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMF 192
Query: 238 --IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
I + D+ +W+A+I GYA+ G EA++LF +M + + P E T V+ A A
Sbjct: 193 DEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIE 252
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
GRQ+HS I GF S + N ++D Y KC +E + F+ + DV+SWN LI G+
Sbjct: 253 LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYT 312
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSN 413
Y EA+ L ++ML G PN T +IL + + AIE G+ H I K G +
Sbjct: 313 HMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANA 372
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
++L+DMYAKCG + A++VFD + +++L SWN M+ G+A HG A +I+S M++
Sbjct: 373 SSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRK 432
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
N+I+P+D TF+G+LSAC H G+++ G H F SM D+ I+P+++H ++ L G +
Sbjct: 433 NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFK 492
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A E I + +EP+ V+W LL CK + ++ LG A+ ++ +P++ ++++LSN+YA
Sbjct: 493 EAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYA 552
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
A W+E AK+R ++ +K +KK GCS E+ + +H F + +++ ++ ++ V
Sbjct: 553 TAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 612
Query: 654 HLFDGGYVPD 663
L + G+VPD
Sbjct: 613 LLEEAGFVPD 622
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 213/457 (46%), Gaps = 72/457 (15%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLIN---LYAKCEKLDLASRVFSNI 238
S+L C L +L++ IH+ + K L + LI L + L A VF I
Sbjct: 7 SLLHNCKTLQSLRM---IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETI 63
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
Q P+L W+ + G+A A+ L+V M S GL+P+ TF ++L + A K G+
Sbjct: 64 QEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQ 123
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H ++K+G+ +V +++ Y + LE++ K FD+ DVVS+ ALI G+ +
Sbjct: 124 QIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKG 183
Query: 359 HYG-------------------------------EAIELLKDMLFEGHCPNLYTYSNILN 387
+ EA+EL K+M+ P+ T ++++
Sbjct: 184 YIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVS 243
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ +IE G+Q H I GF SN+ I +AL+D+Y KCG + A +F+ LS K+++S
Sbjct: 244 ACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVIS 303
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG-WHYFNSM 506
WNT++ GY L +EAL ++ M + PND T + +L AC H+G +E G W +
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYIN 363
Query: 507 IRDHGISPRMDHIASVVHL-------------------------------FACRGQTRRA 535
R G++ H S++ + FA G+ A
Sbjct: 364 KRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAA 423
Query: 536 YEF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRY 569
++ ++ + IEP+ + + LLS C L LGR+
Sbjct: 424 FDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRH 460
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 138/555 (24%), Positives = 242/555 (43%), Gaps = 79/555 (14%)
Query: 1 MITSGFHPNVITYNHLL---LMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP 57
MI +G H + L+ ++ F + A +F+ + E N++ W+ + G + P
Sbjct: 25 MIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP 84
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
AL + M+ L PN YT+ + +CA R G++IHG + + G +L+ +V L
Sbjct: 85 VSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSL 144
Query: 118 INMYGKCGLLSSAQFVFDASLER-------------------------------NSISWV 146
I+MY + G L A+ VFD S R + +SW
Sbjct: 145 ISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWN 204
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+++S Y + G + L++F K+ V E + SV+ ACA ++++G Q+HS +
Sbjct: 205 AMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDH 264
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
+ + LI+LY KC +++ A +F + D+ +W+ LIGGY + EA+ LF
Sbjct: 265 GFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 324
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM--GFSSFTFVANTVLDFYS 324
+M SG P++VT +L A A + GR +H I K G ++ + +++D Y+
Sbjct: 325 QEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYA 384
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
KC +E + + FD + + SWNA+I G A ++ M P+ T+
Sbjct: 385 KCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVG 444
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF-----DH 439
+L+ S G L+ R +F D+
Sbjct: 445 LLSACS-----------------------------------HSGMLDLGRHIFRSMKEDY 469
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ L + M+ GL +EA E+ + M+ ++P+ + +L AC VE G
Sbjct: 470 KITPKLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACKMYANVELG 526
Query: 500 WHYFNSMIRDHGISP 514
Y ++I+ +P
Sbjct: 527 ESYAQNLIKIEPKNP 541
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 222/447 (49%), Gaps = 48/447 (10%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H +V++Y L+ Y I AQK+FDE+P ++V+SW+A+ISG+++ G + AL F+
Sbjct: 166 HRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKE 225
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ + P+ T V VSACA G+++H + G N + N LI++Y KCG
Sbjct: 226 MMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 285
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ +A +F+ ++ ISW +L+ Y + L +F +SG + ++ + S+L A
Sbjct: 286 VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPA 345
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVA------MGLINLYAKCEKLDLASRVFSNIQL 240
CA LG +++G IH + K K VA LI++YAKC ++ A +VF +I
Sbjct: 346 CAHLGAIEIGRWIHVYINKRL----KGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILN 401
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
L++W+A+I G+A G+A A D+F +M + + P ++TF +L A +
Sbjct: 402 RSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACS----------- 450
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS ++ +G F ++E K +++ + + + GH S +
Sbjct: 451 HSGMLDLGRHIF--------------RSMKEDYKITPKLEHYGCM---IDLLGH--SGLF 491
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSNVVIGS 418
EA E++ M E P+ + ++L +E G+ ++K P + V+
Sbjct: 492 KEAEEMINTMEME---PDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVL-- 546
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNL 445
L ++YA GR N+ K+ L+ K +
Sbjct: 547 -LSNIYATAGRWNEVAKIRALLNDKGM 572
>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 205/693 (29%), Positives = 347/693 (50%), Gaps = 38/693 (5%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L++ Y+K + +A K+F + NV+S++A+ISGF++ A+ F M +E
Sbjct: 127 NALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIE 186
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N +++V ++ C D G ++H + + G + VSN L+ +YGKCG L S +
Sbjct: 187 LNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQL 246
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGN 192
FD R+ SW +++SS + + ++F + R G I F+ +++L A L +
Sbjct: 247 FDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLAS 306
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC----------EKL-------------- 228
+ VG +IH+ V K E + V LI Y KC EK+
Sbjct: 307 M-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITA 365
Query: 229 -------DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTF 281
DLA VF + + +++A++ G+ Q G+ +A+ F +M G+ ++ T
Sbjct: 366 YMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTL 425
Query: 282 SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK--TFDEM 339
+ VL A + E +Q+H I+K GF S + +LD ++C + ++ K +
Sbjct: 426 TGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSF 485
Query: 340 DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH-CPNLYTYSNILNISSDIPAIEWG 398
+ + W ++I G+ + EAI L EG + + +L + + E G
Sbjct: 486 SQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMG 545
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
KQ HC +K GF S++ +G++++ MY+KC ++DA KVF+ + + ++VSWN ++ G+ H
Sbjct: 546 KQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLH 605
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG--LVEEGWHYFNSMIRDHGISPRM 516
G EAL ++S M++ IKP+ TF+ ++SA H LV+ F SM + I P +
Sbjct: 606 RQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTV 665
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILS 576
+H S+V + G A E I PIEP VWR LL C+ H + +G+ AA+ +L+
Sbjct: 666 EHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLA 725
Query: 577 TDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRF 636
P D S +I++SN+Y+ W + VR+ M+ K +K G SW +NK+H F
Sbjct: 726 MKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDK 785
Query: 637 AQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ Q D+H + L + GYVPD + H
Sbjct: 786 SHPQAKDIHSGLELLIMECLKAGYVPDTSFVLH 818
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 157/527 (29%), Positives = 240/527 (45%), Gaps = 71/527 (13%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF N L+ +Y K ++ +LFDEMP R++ SW+ +IS + M E A
Sbjct: 215 VIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERA 274
Query: 61 LNYFRLMVCCV-LEPNYYTYVGAVSACASRGDAR-SGKEIHGRMYRSGLELNSHVSNCLI 118
FR M +++T + A+RG A G+EIH + + G E N V N LI
Sbjct: 275 FELFRDMRRIDGFRIDHFTL--STILVAARGLASMVGREIHAHVIKIGFESNISVINALI 332
Query: 119 NMYGKC-------------------------------GLLSSAQFVFDASLERNSISWVS 147
Y KC GL A VFD RNSIS+ +
Sbjct: 333 RFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNA 392
Query: 148 LLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCA 207
+LS +CQ GE L F + GV +++F+ VL AC +L K+ QIH + K
Sbjct: 393 ILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFG 452
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA--WSALIGGYAQLGKACEAIDL 265
+ + L+++ +C ++ A ++FS + W+++I GYA+ + EAI L
Sbjct: 453 FGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISL 512
Query: 266 FVK-MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
F + ++ +V + VLG + G+Q+H +K GF S V N+++ YS
Sbjct: 513 FCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYS 572
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
KC +++++K F+ M HD+VSWN LIAGHL EA+ + M G P+ T+
Sbjct: 573 KCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTF-- 630
Query: 385 ILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKN 444
+L IS+ + T+ S LVD C RL + K H+
Sbjct: 631 VLIISA-------YRHTN---------------SNLVD---NCRRLFLSMKTIYHIDPT- 664
Query: 445 LVSWNTMLVGYAQH-GLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
V T LVG + GL EA E M+ + I+P + + +L AC
Sbjct: 665 -VEHYTSLVGVLGYWGLLEEAEE---MINKMPIEPEASVWRALLDAC 707
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 139/548 (25%), Positives = 246/548 (44%), Gaps = 53/548 (9%)
Query: 91 DARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
D K +H +++ L + H++N LI Y K G++ +A VF N +S+ +++S
Sbjct: 105 DVELIKAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMIS 162
Query: 151 SYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF 210
+ + ++IF R SG+ ++EFS ++L C L +L++G Q+H++V K
Sbjct: 163 GFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLN 222
Query: 211 DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF 270
FV+ L+ LY KC LD ++F + D+ +W+ +I + A +LF M
Sbjct: 223 YTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMR 282
Query: 271 S-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
G T S +L A + + GR++H+ +IK+GF S V N ++ FY+KC +
Sbjct: 283 RIDGFRIDHFTLSTILVAARGLASMV-GREIHAHVIKIGFESNISVINALIRFYTKCGSI 341
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM----------LFEGHCPN- 378
+ + F++M DV++W +I ++ A+E+ M + G C N
Sbjct: 342 KHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNG 401
Query: 379 --------------------LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+T + +LN + + KQ H I+K GF SN I +
Sbjct: 402 EGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEA 461
Query: 419 ALVDMYAKCGRLNDARKV--FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ-ENK 475
AL+DM +CGR+ DA+K+ S + W +M+ GYA++ EA+ ++ Q E
Sbjct: 462 ALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGA 521
Query: 476 IKPNDNTFIGVLSACVHIGLVEEG----WHYFNS-MIRDHGISPRMDHIASVVHLFACRG 530
+ + VL C + E G H S + D G+ S++ +++
Sbjct: 522 MVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVG------NSIITMYSKCS 575
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK--DLVLGRYAAEKILSTDPEDTSAHIML 588
A + P + V W L++G H+ D L ++ + P DT +++
Sbjct: 576 NMDDAIKVFNVMPAH-DIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKP-DTVTFVLI 633
Query: 589 SNVYAEAN 596
+ Y N
Sbjct: 634 ISAYRHTN 641
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 195/658 (29%), Positives = 330/658 (50%), Gaps = 65/658 (9%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
NYYT A+ C + K++H R+ R+ + + N LIN YGK G L +A+ VF
Sbjct: 6 NYYT--AALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVF 63
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIF-------------LLSRKSG--------- 172
D + N SW +LLS+Y + G ++F LLS +G
Sbjct: 64 DHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVR 123
Query: 173 ----------VAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLY 222
V ++ + +++L + G + +G QIH +FK + FV L+++Y
Sbjct: 124 VYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMY 183
Query: 223 AKCEKLDLASRVFSNI-----------------------------QLP--DLTAWSALIG 251
AK ++ A+R+F I +P D +W+ +I
Sbjct: 184 AKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIIT 243
Query: 252 GYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
G Q G EA+D F +M G + TF VL A G+Q+H+ II+ +
Sbjct: 244 GLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQD 303
Query: 312 FTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML 371
FV + +LD Y KC ++ + F +M +V+SW A++ G+ + + EA+ + DM
Sbjct: 304 NIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQ 363
Query: 372 FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLN 431
P+ +T ++++ +++ ++E G Q H + G V + +AL+ +Y KCG L
Sbjct: 364 RNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLE 423
Query: 432 DARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
A ++F + ++ VSW ++ GYAQ G E + ++ M + I P+ TF+GVLSAC
Sbjct: 424 HAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACS 483
Query: 492 HIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
GLVE+G+HYF M+++H I+P DH ++ L + G+ A FI P P+ + W
Sbjct: 484 RAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGW 543
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
LLS C+ + +L +G++AAE + +P++ +++I+LS++YA WD+ AK+RK M+E
Sbjct: 544 ATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREM 603
Query: 612 SLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+KK+ G SW + +NK+H FS + ++ + L + + + GYVPD + H
Sbjct: 604 GVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLH 661
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 233/480 (48%), Gaps = 34/480 (7%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
PN+ ++N LL Y K + D Q++FD MP +V+SW++L+SG++ G+ ++ + +
Sbjct: 68 QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127
Query: 67 MVC-CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M+ + N T+ + ++RG G++IHG++++ G + V + L++MY K G
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187
Query: 126 LLSSAQFV-------------------------------FDASLERNSISWVSLLSSYCQ 154
++ A + FD E++SISW ++++ Q
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
G + F G + +F+ SVL AC L G QIH+ + + + + FV
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFV 307
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
L+++Y KC + A VF ++ ++ +W+A++ GY Q G + EA+ +F M + +
Sbjct: 308 GSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEI 367
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
P + T V+ + A++ G Q H + G F V+N ++ Y KC LE + +
Sbjct: 368 HPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQ 427
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
F EM D VSW AL++G+ E I L + ML G P+ T+ +L+ S
Sbjct: 428 LFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGL 487
Query: 395 IEWGKQTHCCIVKPGFDSNVVIG-SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTML 452
+E G C+VK + + + ++D+ ++ GRL +A+ + + S + + W T+L
Sbjct: 488 VEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLL 547
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 186/362 (51%), Gaps = 6/362 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N++ YN ++ ++ I +A++LFD MPE++ ISW+ +I+G +Q G+ + A++ F+ M
Sbjct: 203 NIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMG 262
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ +T+ ++AC GK+IH + R+ + N V + L++MY KC +
Sbjct: 263 IEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVK 322
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ VF +N ISW ++L Y Q G ++IF +++ + +F+ SV+ +CA
Sbjct: 323 YAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCA 382
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L +L+ G Q H L V+ LI LY KC L+ A ++F +++ D +W+A
Sbjct: 383 NLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTA 442
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK-M 307
L+ GYAQ GKA E I LF M + G++P VTF VL A + G ++K
Sbjct: 443 LVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEH 502
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIEL 366
+ ++D S+ LEE+ ++M D + W L L+SC +E+
Sbjct: 503 RITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATL----LSSCRLNGNLEI 558
Query: 367 LK 368
K
Sbjct: 559 GK 560
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 130/269 (48%), Gaps = 15/269 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + + N+ + LL MY K + A+ +F +M +NVISW+A++ G+ Q G E A
Sbjct: 296 IIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEA 355
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M + P+ +T +S+CA+ G + HG+ SGL VSN LI +
Sbjct: 356 VRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITL 415
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG L A +F R+ +SW +L+S Y Q G+ + +F G+ +
Sbjct: 416 YGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTF 475
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG-----LINLYAKCEKLDLASRVF 235
VL AC+ G ++ G F+C ++ + + +I+L ++ +L+ A
Sbjct: 476 VGVLSACSRAGLVEKGYH----YFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFI 531
Query: 236 SNIQL-PDLTAWSAL-----IGGYAQLGK 258
+ + PD W+ L + G ++GK
Sbjct: 532 NQMPFSPDAIGWATLLSSCRLNGNLEIGK 560
>gi|125578267|gb|EAZ19413.1| hypothetical protein OsJ_34968 [Oryza sativa Japonica Group]
Length = 786
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 325/624 (52%), Gaps = 13/624 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N+L + Y + ++ A K+FDEMP RN++SW+A++S ++ G P + +F M+
Sbjct: 26 NYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFC 85
Query: 74 PNYYTYVGAVSACASRGDARS-----GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
PN ++ ++AC S + S G+++H + S LE N+ V N L++MY +
Sbjct: 86 PNEFSLATMLTACHSMACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKE 145
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+A VF +++++SW ++ S + + + ++G +E + + +L
Sbjct: 146 TAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSG 205
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
N +G+QI +L ++ + VA +IN+ +C LD A F ++ ++ W+
Sbjct: 206 AKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNE 265
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+I GY + +A+ LF + G P E T+S VL AF + Q+H++I+K G
Sbjct: 266 IIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQG 325
Query: 309 FSSFTFVANTVLDFYSKC-ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
F+S FV+ +++ + ++ SLK ++ + ++VSW A+I+ L E I L
Sbjct: 326 FASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLF 385
Query: 368 KDMLFEGHC---PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
LF G P+ + + +LN ++ I + H ++K G ++ + SA+VD Y
Sbjct: 386 N--LFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAY 443
Query: 425 AKCGRLNDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
AKCG + A F +SS + + +NTML YA HGL EAL +Y M + K+ P T
Sbjct: 444 AKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPAT 503
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F+ +LSAC H+GLVE+G F++M+ +G+ P + A +V L A +G A I +
Sbjct: 504 FVAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAM 563
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
P +P VWR L++GC+ H + LG AAE+IL P A++ LSNVYA+ W
Sbjct: 564 PFQPWPAVWRSLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAE 623
Query: 603 KVRKIMKEKSLKKDTGCSWTELQN 626
+ R+ M + +L+K G E N
Sbjct: 624 ETRRRMVQNNLQKVHGYVALEYAN 647
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 210/466 (45%), Gaps = 8/466 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I S N N L+ MY + + A +F ++ +++ +SW+ + SGF+ +
Sbjct: 119 VIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAV 178
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
Y M +PN T+ + ++ +A G +I YR G N V+N +INM
Sbjct: 179 FGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINM 238
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+CGLL A F + RN ++W +++ Y +++F G EF+
Sbjct: 239 LFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTY 298
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC-EKLDLASRVFSNIQ 239
++VL A + QIH+++ K +FV+ LI A + + ++ +
Sbjct: 299 SAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSG 358
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMF--SSGLMPSEVTFSYVLGAFADVKETIGG 297
+L +W A+I + + G E I LF +F S P E + VL A A+
Sbjct: 359 KMELVSWGAIISAFLKHGLNDEVIFLF-NLFRGDSTNKPDEFILATVLNACANAALIRHC 417
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE--HDVVSWNALIAGHL 355
R +HSL++K G S+ VA+ V+D Y+KC + + F + +D + +N ++ +
Sbjct: 418 RCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYA 477
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNV 414
EA+ L ++M P T+ IL+ S + +E GK ++ G
Sbjct: 478 NHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPAR 537
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG 459
+ LVD+ A+ G L++A+ V D + + + W +++ G HG
Sbjct: 538 ANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHG 583
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 180/609 (29%), Positives = 324/609 (53%), Gaps = 40/609 (6%)
Query: 92 ARSGKEIHGRMYRSGLELNSHVS-NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
A SG H R + + V+ N L++ + GL+ + +F + +R+++S+ +LL+
Sbjct: 57 ASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLA 116
Query: 151 SYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
+ + G H + LL ++GV S + + V+ + LG+ +G Q+H + +
Sbjct: 117 GFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGF 176
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSN------------------------------- 237
F L+++YAK + A RVF
Sbjct: 177 GAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEA 236
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL---GAFADVKET 294
I+ D W+ ++ G Q G EA+D+F +M + G+ + TF +L GA A ++E
Sbjct: 237 IEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEE- 295
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G+Q+H+ I + + FV + ++D YSKC + + F M +++SW A+I G+
Sbjct: 296 --GKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGY 353
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ EA+ + +M +G P+ +T ++++ +++ ++E G Q HC + G V
Sbjct: 354 GQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYV 413
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +ALV +Y KCG + DA ++FD +S + VSW +++GYAQ G +E ++++ M
Sbjct: 414 TVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSK 473
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
+KP+ TFIGVLSAC GLV++G YF+SM +DH I P DH ++ L++ G ++
Sbjct: 474 GVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQ 533
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
A EFIK P P+ W LLS C+ D+ +G++AAE +L DP++ +++++L +++A
Sbjct: 534 AEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHAS 593
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
W++ AK+R+ M+++ +KK+ GCSW + +NK+H FS + ++E + L+
Sbjct: 594 KGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSK 653
Query: 655 LFDGGYVPD 663
+ + GY PD
Sbjct: 654 MVEEGYKPD 662
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 244/507 (48%), Gaps = 45/507 (8%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N++T N LL + + D ++LF +P+R+ +S++AL++GFS+ G A + ++
Sbjct: 76 NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135
Query: 69 C--CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
+ P+ T G V ++ GD G+++H ++ R G + + L++MY K G
Sbjct: 136 RDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGP 195
Query: 127 LSSAQFVFD-------------------------------ASLERNSISWVSLLSSYCQC 155
+ A+ VFD A ER+SI+W ++++ Q
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQN 255
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
G L +F R GV I +++ S+L AC L L+ G QIH+ + + E + FV
Sbjct: 256 GLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVG 315
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
L+++Y+KC + LA VF + ++ +W+A+I GY Q G EA+ +F +M G+
Sbjct: 316 SALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIK 375
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P + T V+ + A++ G Q H L + G + V+N ++ Y KC +E++ +
Sbjct: 376 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRL 435
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
FDEM HD VSW AL+ G+ E I+L + ML +G P+ T+ +L+ S +
Sbjct: 436 FDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLV 495
Query: 396 EWGKQTHCCIVKPGFDSNVVI----GSALVDMYAKCGRLNDARKVFDHLSS-KNLVSWNT 450
+ G+ + + D ++V + ++D+Y++ G L A + + + W T
Sbjct: 496 DKGRSYFHSMQQ---DHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWAT 552
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIK 477
+L G +EI EN +K
Sbjct: 553 LLSACRLRG----DMEIGKWAAENLLK 575
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 192/388 (49%), Gaps = 17/388 (4%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
NV+ N ++ ++ + +A+ LF+ + ER+ I+W+ +++G +Q G+ AL+ FR M
Sbjct: 210 NVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMR 269
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+ + YT+ ++AC + GK+IH + R+ E N V + L++MY KC +
Sbjct: 270 AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVR 329
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ VF + +N ISW +++ Y Q G +++F ++ G+ +F+ SV+ +CA
Sbjct: 330 LAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCA 389
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L +L+ G Q H L L V+ L+ LY KC ++ A R+F + D +W+A
Sbjct: 390 NLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTA 449
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-LHSLIIKM 307
L+ GYAQ GKA E IDLF KM S G+ P VTF VL A + GR HS+
Sbjct: 450 LVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDH 509
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSWNALIAGHLASCHYGEAIEL 366
++D YS+ L+++ + +M D W L L++C +E+
Sbjct: 510 DIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATL----LSACRLRGDMEI 565
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPA 394
K + N+L + PA
Sbjct: 566 GK-----------WAAENLLKLDPQNPA 582
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 14/253 (5%)
Query: 6 FHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFR 65
+ NV + L+ MY K + A+ +F M +N+ISW+A+I G+ Q G E A+ F
Sbjct: 308 YEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFS 367
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
M ++P+ +T +S+CA+ G + H SGL VSN L+ +YGKCG
Sbjct: 368 EMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCG 427
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ A +FD + +SW +L+ Y Q G+ + +F GV + VL
Sbjct: 428 SIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLS 487
Query: 186 ACAVLGNLKVG-------MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
AC+ G + G Q H +V L+ D + M I+LY++ L A +
Sbjct: 488 ACSRSGLVDKGRSYFHSMQQDHDIV---PLD-DHYTCM--IDLYSRSGWLKQAEEFIKQM 541
Query: 239 -QLPDLTAWSALI 250
+ PD W+ L+
Sbjct: 542 PRCPDAFGWATLL 554
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG P V N L+ +Y K I DA +LFDEM + +SW+AL+ G++Q G + +
Sbjct: 405 LVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETI 464
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG--LELNSHVSNCLIN 119
+ F M+ ++P+ T++G +SAC+ G G+ M + + L+ H + C+I+
Sbjct: 465 DLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYT-CMID 523
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSS 151
+Y + G L A +F+ ++ W +LLS+
Sbjct: 524 LYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSA 556
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKI 476
+ L+ YA G L AR+VFD + +NLV+ N++L A+ GL R+ ++ S+ Q + +
Sbjct: 50 NTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAV 109
Query: 477 KPN 479
N
Sbjct: 110 SYN 112
>gi|449450916|ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 616
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 178/550 (32%), Positives = 298/550 (54%), Gaps = 2/550 (0%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P +S C G ++H + + G LN ++ L++MYGKC +S A V
Sbjct: 66 PTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKV 125
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD + ++W SL++ Y Q G + + +FL K G+ + FS + L C+ L
Sbjct: 126 FDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKG 185
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G Q+H++ K + V GLI++Y+KC L + RVF + ++ W+++I GY
Sbjct: 186 DLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGY 245
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
A+ EA+ L +M L P+ +T++ +L +F+ + +Q+H II G+ S
Sbjct: 246 ARNQLPHEAMILMREMLHLNLKPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNN 305
Query: 314 FVANTVLDFYSK-CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
++A T++ YS+ C LE+ K + D +SWNA+IAG EA+E M
Sbjct: 306 YIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRR 365
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
E + +T+++I A+E GKQ H + K G+ N+ + + LV MYA+ G + D
Sbjct: 366 EKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRD 425
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
++ VF ++ +L+SWN++L G A HG G EA++++ M+ IKP++ +F+ VL+AC H
Sbjct: 426 SKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSH 485
Query: 493 IGLVEEGWHYFNSMIRDHGI-SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
+GL+++G YF M + P+++H A++V LF G+ A FI+S PIEP ++
Sbjct: 486 VGLLDKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIY 545
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
+ LLS C H + + A+K+L P D + +IMLSN WD+ A +R++M +
Sbjct: 546 KALLSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSNALGRDGYWDDAASIRRLMSNR 605
Query: 612 SLKKDTGCSW 621
+KK+ G SW
Sbjct: 606 GVKKEPGFSW 615
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 238/496 (47%), Gaps = 45/496 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF N + L+ MY K I+DA K+FDEM +V++W++L++G+ Q G P +A
Sbjct: 94 IIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMA 153
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F M+ +EP ++ G + C+ G ++H + N V LI+M
Sbjct: 154 VSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDM 213
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLS------RKSGVA 174
Y KC L ++ VFD L +N +W S++S Y + + H I + + +G+
Sbjct: 214 YSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYAR-NQLPHEAMILMREMLHLNLKPNGMT 272
Query: 175 ----ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK-CEKLD 229
+S FSC C QIH + E + ++A+ L+ Y++ C L+
Sbjct: 273 YNSLLSSFSCPRHFDKCK---------QIHCRIITEGYESNNYIAVTLVTAYSECCGSLE 323
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
+V SNI++ D +W+A+I G+ LG EA++ F++M TF+ + A
Sbjct: 324 DYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIG 383
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
G+Q+H L+ K G++ V N ++ Y++ + +S F M+EHD++SWN+
Sbjct: 384 MTSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNS 443
Query: 350 LIAGHLASCHY----GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ----- 400
L++G C Y EAI+L + M P+ ++ +L S + ++ G +
Sbjct: 444 LLSG----CAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLM 499
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG 459
+ +V+P + + LVD++ + G+L +A + + + +S + +L HG
Sbjct: 500 RNSELVEP---PKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHG 556
Query: 460 -------LGREALEIY 468
++ LE+Y
Sbjct: 557 NKDIAIRTAKKLLELY 572
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 355 LASCHYGEA----------------IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
L SCHY + I+ L +L G P + ++I + +++G
Sbjct: 28 LISCHYTHSEDVSIKPLLQTHNVVDIQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFG 87
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
Q H I+K GF N I +ALVDMY KC ++DA KVFD +S ++V+WN+++ GY Q
Sbjct: 88 IQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQA 147
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
G A+ ++ M + I+P + G L C +
Sbjct: 148 GYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQL 182
>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
Length = 732
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 189/595 (31%), Positives = 311/595 (52%), Gaps = 7/595 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + N L+ MY K +++A + EMP+R+VISW+ +ISG++Q G +
Sbjct: 142 VLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLREMPKRDVISWNIMISGYAQSGDCKEG 201
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M L P TY ++AC+S D GK IH + GL+ + V + L+ M
Sbjct: 202 LRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGM 261
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG L + ERN+I+W +++ +Y + +H L+ F + GV +
Sbjct: 262 YGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLQGVKADAVTF 321
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+LG C+ +L G+ +H + + E V L +YAKC LD A ++F +
Sbjct: 322 VLMLGTCSSPAHLAQGILLHDWISQLGFE-SIIVHNSLTAMYAKCGSLDAARKMFEGMPS 380
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W++LI Q G +A F +M G P EVT +L A G +
Sbjct: 381 RNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSI 440
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H ++++ GF T VAN ++ Y+K E + FD M E + VSWN ++A ++
Sbjct: 441 HQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLN 500
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA-IEWGKQTHCCIVKPGFDS--NVVIG 417
+A+E+ M + TY L+ S + + GK H ++ GF + + V
Sbjct: 501 RDAVEMFWKMDV---ARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAA 557
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ALV+MY KCG L +ARK+FD + +++V+W +++V YAQH +AL++ +M+++ +K
Sbjct: 558 TALVNMYGKCGSLQEARKIFDEMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQDGVK 617
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
+D F+ +LS C H GL+EEG YF SMI D+GISPR++H ++ + G A +
Sbjct: 618 VDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEK 677
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
+ P + VW LL+ C+ H + G+ AA +I DP +A+++LSN+Y
Sbjct: 678 LVDRLPSRSDSKVWMTLLAACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIY 732
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 167/564 (29%), Positives = 283/564 (50%), Gaps = 12/564 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG-MPEVALN 62
SG ++ N L+ MY K DA +LF M NV+SW+++I F+Q G + ++
Sbjct: 47 SGLETDIYAANALINMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVL 106
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
FR M + PN T V + AC + G+++HG + +G+ L++ + N L++MY
Sbjct: 107 LFRKMELEGIRPNLITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYC 162
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
K G + A V +R+ ISW ++S Y Q G+ GL+ ++ G++ ++ + A+
Sbjct: 163 KTGDVDEADLVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYAT 222
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L AC+ +L G IH V L+ D+ V L+ +Y KC L+ R + +
Sbjct: 223 LLNACSSGEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERN 282
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
AW+ +IG YA+ +A+ F +M G+ VTF +LG + G LH
Sbjct: 283 TIAWNTIIGAYARYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHD 342
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
I ++GF S V N++ Y+KC L+ + K F+ M + VSWN+LI+ + Y +
Sbjct: 343 WISQLGFESI-IVHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYAD 401
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A + + M EG P+ T ++L+ + + G H +V+ GFD + +AL+
Sbjct: 402 AHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIF 461
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MYAK G AR VFD ++ +N VSWNT+L Y + GL R+A+E++ M + + T
Sbjct: 462 MYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMD---VARDKVT 518
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA--SVVHLFACRGQTRRAYEFIK 540
++ L AC + + + DHG S R+D +A ++V+++ G + A + I
Sbjct: 519 YVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARK-IF 577
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDL 564
+ + V W L+ H ++
Sbjct: 578 DEMLHRDVVTWTSLIVAYAQHSEI 601
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 250/501 (49%), Gaps = 12/501 (2%)
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL ++ M + P+ T+V + AC G G+++H + SGLE + + +N LIN
Sbjct: 2 ALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALIN 61
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK---SGVAIS 176
MYGKC A +F N +SW S++ ++ Q G H+ G + LL RK G+ +
Sbjct: 62 MYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYG-HL-GRESVLLFRKMELEGIRPN 119
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+ +VL AC NL G Q+H V + + D + L+++Y K +D A V
Sbjct: 120 LITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLR 175
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ D+ +W+ +I GYAQ G E + +M GL P++VT++ +L A + ++
Sbjct: 176 EMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGE 235
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+ +H ++ MG V + +L Y KC LE+ ++ E+ E + ++WN +I +
Sbjct: 236 GKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYAR 295
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ +A+ + M +G + T+ +L S + G H I + GF+S +++
Sbjct: 296 YSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFES-IIV 354
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
++L MYAKCG L+ ARK+F+ + S+N VSWN+++ QHG +A + + M+
Sbjct: 355 HNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGS 414
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
+P++ T I +L AC +EG + M+ + G R +++ ++A G A
Sbjct: 415 RPDEVTCISMLDACTKQANAKEG-SSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAAR 473
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
+ E N V W +L+
Sbjct: 474 NVFDAMA-ERNTVSWNTILAA 493
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 226/469 (48%), Gaps = 21/469 (4%)
Query: 160 HGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLI 219
L+++ + GV + + L AC V G L G ++H+ + + LE D + A LI
Sbjct: 1 QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60
Query: 220 NLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK-ACEAIDLFVKMFSSGLMPSE 278
N+Y KC + A ++FS ++ P++ +W+++IG +AQ G E++ LF KM G+ P+
Sbjct: 61 NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNL 120
Query: 279 VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE 338
+T VL A GRQ+H +++ G S T + N ++D Y K ++E+ E
Sbjct: 121 ITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLRE 176
Query: 339 MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
M + DV+SWN +I+G+ S E + L M +G P TY+ +LN S + G
Sbjct: 177 MPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEG 236
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
K H +V G D + V+ S L+ MY KCG L D ++ + +N ++WNT++ YA++
Sbjct: 237 KSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARY 296
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
+AL + MQ +K + TF+ +L C + +G + I G + H
Sbjct: 297 SDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGI-LLHDWISQLGFESIIVH 355
Query: 519 IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE------ 572
S+ ++A G A + + P N V W L+S H G YA
Sbjct: 356 -NSLTAMYAKCGSLDAARKMFEGMP-SRNSVSWNSLISAAIQH-----GCYADAHKFFQR 408
Query: 573 -KILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCS 620
K+ + P++ + ML +AN E + + +++ E K TG +
Sbjct: 409 MKLEGSRPDEVTCISMLDACTKQANA-KEGSSIHQMVVESGFDKRTGVA 456
>gi|115486944|ref|NP_001065959.1| Os12g0109800 [Oryza sativa Japonica Group]
gi|113648466|dbj|BAF28978.1| Os12g0109800 [Oryza sativa Japonica Group]
Length = 841
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 193/631 (30%), Positives = 324/631 (51%), Gaps = 8/631 (1%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +G N + LLLMY K RI AQ+ F + +++ W+A++ G+ G A+
Sbjct: 120 VRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAI 179
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ +M L P+ YTY+ AV AC+ G+++H + S LE N+ V N L++MY
Sbjct: 180 STVLVMHHSGLAPDRYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMY 239
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+ +A VF +++++SW ++ S + + + ++G +E + +
Sbjct: 240 FRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFS 299
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L N +G+QI +L ++ + VA +IN+ +C LD A F ++
Sbjct: 300 VLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFR 359
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ W+ +I GY + +A+ LF + G P E T+S VL AF + Q+H
Sbjct: 360 NIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIH 419
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKC-ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
++I+K GF+S FV+ +++ + ++ SLK ++ + ++VSW A+I+ L
Sbjct: 420 AIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLN 479
Query: 361 GEAIELLKDMLFEGHC---PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
E I L LF G P+ + + +LN ++ I + H ++K G ++ +
Sbjct: 480 DEVIFLFN--LFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVA 537
Query: 418 SALVDMYAKCGRLNDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
SA+VD YAKCG + A F +SS + + +NTML YA HGL EAL +Y M + K
Sbjct: 538 SAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAK 597
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+ P TF+ +LSAC H+GLVE+G F++M+ +G+ P + A +V L A +G A
Sbjct: 598 LNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEA 657
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
I + P +P VWR L++GC+ H + LG AAE+IL P A++ LSNVYA+
Sbjct: 658 KGVIDAMPFQPWPAVWRSLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADD 717
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
W + R+ M + +L+K G E N
Sbjct: 718 GEWQSAEETRRRMVQNNLQKVHGYVALEYAN 748
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 146/556 (26%), Positives = 270/556 (48%), Gaps = 9/556 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N+L + Y + ++ A K+FDEMP RN++SW+A++S ++ G P + +F M+
Sbjct: 26 NYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFC 85
Query: 74 PNYYTYVGAVSACASRGDARSGK-----EIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
PN ++ ++AC S S K +HG R+GL+ N V + L+ MY K G ++
Sbjct: 86 PNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIA 145
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+AQ F ++ W ++L Y G H + L+ SG+A ++ S + AC+
Sbjct: 146 AAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACS 205
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ +G Q+H LV LE + V L+++Y + + + A+ VF I+ D +W+
Sbjct: 206 ISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNT 265
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
+ G+A + M +G P+EVTFS +L + G Q+ +L + G
Sbjct: 266 MFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHG 325
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
++ VAN V++ +C LL+ + F + ++V+WN +IAG+ H +A+ L +
Sbjct: 326 YTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFR 385
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC- 427
++ G P+ +TYS +L+ + +Q H I+K GF S + ++L+ A
Sbjct: 386 SLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAF 445
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI-KPNDNTFIGV 486
G + + K+ + LVSW ++ + +HGL E + ++++ + + KP++ V
Sbjct: 446 GSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATV 505
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFIKSSPIE 545
L+AC + L+ +S++ G S ++VV +A C T F S
Sbjct: 506 LNACANAALIRH-CRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSAT 564
Query: 546 PNKVVWRCLLSGCKTH 561
+ +++ +L+ H
Sbjct: 565 NDAIMYNTMLTAYANH 580
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 220/488 (45%), Gaps = 10/488 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I S N N L+ MY + + A +F ++ +++ +SW+ + SGF+ +
Sbjct: 220 VIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAV 279
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
Y M +PN T+ + ++ +A G +I YR G N V+N +INM
Sbjct: 280 FGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINM 339
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
+CGLL A F + RN ++W +++ Y +++F G EF+
Sbjct: 340 LFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTY 399
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC-EKLDLASRVFSNIQ 239
++VL A + QIH+++ K +FV+ LI A + + ++ +
Sbjct: 400 SAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSG 459
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMF--SSGLMPSEVTFSYVLGAFADVKETIGG 297
+L +W A+I + + G E I LF +F S P E + VL A A+
Sbjct: 460 KMELVSWGAIISAFLKHGLNDEVIFLF-NLFRGDSTNKPDEFILATVLNACANAALIRHC 518
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE--HDVVSWNALIAGHL 355
R +HSL++K G S+ VA+ V+D Y+KC + + F + +D + +N ++ +
Sbjct: 519 RCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYA 578
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNV 414
EA+ L ++M P T+ IL+ S + +E GK ++ G
Sbjct: 579 NHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPAR 638
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQE 473
+ LVD+ A+ G L++A+ V D + + + W +++ G H G + L + + Q
Sbjct: 639 ANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIH--GNKQLGVLAAEQI 696
Query: 474 NKIKPNDN 481
++ P+ +
Sbjct: 697 LRMAPSSD 704
>gi|449496714|ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11290-like [Cucumis sativus]
Length = 616
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 178/550 (32%), Positives = 298/550 (54%), Gaps = 2/550 (0%)
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
P +S C G ++H + + G LN ++ L++MYGKC +S A V
Sbjct: 66 PTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKV 125
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
FD + ++W SL++ Y Q G + + +FL K G+ + FS + L C+ L
Sbjct: 126 FDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKG 185
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G Q+H++ K + V GLI++Y+KC L + RVF + ++ W+++I GY
Sbjct: 186 DLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGY 245
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
A+ EA+ L +M L P+ +T++ +L +F+ + +Q+H II G+ S
Sbjct: 246 ARNQLPHEAMXLMREMLHLNLEPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNN 305
Query: 314 FVANTVLDFYSK-CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
++A T++ YS+ C LE+ K + D +SWNA+IAG EA+E M
Sbjct: 306 YIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRR 365
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
E + +T+++I A+E GKQ H + K G+ N+ + + LV MYA+ G + D
Sbjct: 366 EKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRD 425
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
++ VF ++ +L+SWN++L G A HG G EA++++ M+ IKP++ +F+ VL+AC H
Sbjct: 426 SKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSH 485
Query: 493 IGLVEEGWHYFNSMIRDHGI-SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVW 551
+GL+++G YF M + P+++H A++V LF G+ A FI+S PIEP ++
Sbjct: 486 VGLLDKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIY 545
Query: 552 RCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEK 611
+ LLS C H + + A+K+L P D + +IMLSN WD+ A +R++M +
Sbjct: 546 KALLSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSNALGRDGYWDDAASIRRLMSNR 605
Query: 612 SLKKDTGCSW 621
+KK+ G SW
Sbjct: 606 GVKKEPGFSW 615
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 236/495 (47%), Gaps = 43/495 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF N + L+ MY K I+DA K+FDEM +V++W++L++G+ Q G P +A
Sbjct: 94 IIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMA 153
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F M+ +EP ++ G + C+ G ++H + N V LI+M
Sbjct: 154 VSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDM 213
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-----LLSRKSGVA- 174
Y KC L ++ VFD L +N +W S++S Y + + + L +G+
Sbjct: 214 YSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMXLMREMLHLNLEPNGMTY 273
Query: 175 ---ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK-CEKLDL 230
+S FSC C QIH + E + ++A+ L+ Y++ C L+
Sbjct: 274 NSLLSSFSCPRHFDKCK---------QIHCRIITEGYESNNYIAVTLVTAYSECCGSLED 324
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
+V SNI++ D +W+A+I G+ LG EA++ F++M TF+ + A
Sbjct: 325 YRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGM 384
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
G+Q+H L+ K G++ V N ++ Y++ + +S F M+EHD++SWN+L
Sbjct: 385 TSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSL 444
Query: 351 IAGHLASCHY----GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----T 401
++G C Y EAI+L + M P+ ++ +L S + ++ G +
Sbjct: 445 LSG----CAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLMR 500
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG- 459
+ +V+P + + LVD++ + G+L +A + + + +S + +L HG
Sbjct: 501 NSELVEP---PKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHGN 557
Query: 460 ------LGREALEIY 468
++ LE+Y
Sbjct: 558 KDIAIRTAKKLLELY 572
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 355 LASCHYGEA----------------IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWG 398
L SCHY + I+ L +L G P + ++I + +++G
Sbjct: 28 LISCHYTHSEDVSIKPLLQTHNVVDIQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFG 87
Query: 399 KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH 458
Q H I+K GF N I +ALVDMY KC ++DA KVFD +S ++V+WN+++ GY Q
Sbjct: 88 IQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQA 147
Query: 459 GLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
G A+ ++ M + I+P + G L C +
Sbjct: 148 GYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQL 182
>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Glycine max]
Length = 895
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 197/664 (29%), Positives = 344/664 (51%), Gaps = 32/664 (4%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SGF V N L+ MY K A +F+ + +++SW+ ++SGF + AL
Sbjct: 104 VCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGFEE---SVDAL 160
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
N+ R M C + + TY A++ C G ++H + + GL + N L+ MY
Sbjct: 161 NFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMY 220
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLL---SRKSGVAISEF 178
+ G+L A+ VFD ER+ +SW +++S Y Q G+ +GL+ LL + G+ I
Sbjct: 221 SRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGK-CYGLEAVLLFVNMVRHGMLIDHV 279
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S + AC + NL++G QIH L K V L++ Y+KCE A VF +I
Sbjct: 280 SLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESI 339
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
++ +W+ +I + +A+ LF M +G+ P++VTF ++ A G
Sbjct: 340 SNRNVVSWTTMISIDEE-----DAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTEGL 394
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H L IK F S V+N+ + Y+K E ++ES K F+E++ + VSWNALI+G+ +
Sbjct: 395 TIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVSWNALISGYAQNG 454
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNI---SSDIPAIEWGKQTHCCIVKPGFDSNVV 415
Y EA+ + E PN YT+ ++LN + DI ++ GK H ++K G ++ +
Sbjct: 455 SYKEALLTYLSAVKEIK-PNQYTFGSVLNAIAAAEDI-SLNHGKSCHSHLLKLGLGTDPI 512
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+ AL+DMY K G + ++++VF+ + +W ++ YA+HG + +Y+ M+
Sbjct: 513 VSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIISAYARHGDFESVMSLYTEMEREG 572
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
I P+ TF+ VL+AC G+V+ G F+SM++ H I P +H + +V + G+ A
Sbjct: 573 INPDSITFLSVLAACCRKGMVDAGHRVFDSMVKKHSIEPTSEHYSIMVDMLGRVGRLDEA 632
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEA 595
E + P P V + LL C+ H ++ + +++ DP + +++++N+YAE
Sbjct: 633 EELMHQIPGGPGLSVLQSLLGSCRLHGNMEMAEKVVGRLIEMDPASSGPYVLMANLYAEK 692
Query: 596 NMWDETAKVRKIMKEKSLKKDTGCSWTELQN----KMHYFSTS-----------RFAQFQ 640
W++ A+VR+ M+ + +KK+ G SW ++ N +H FS+ + A+F
Sbjct: 693 GKWEKVAEVRRGMRGRGVKKEVGFSWVDVSNVDSLYLHGFSSGDKSHPESENICKIAEFL 752
Query: 641 GIDL 644
G+ +
Sbjct: 753 GLQM 756
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 223/459 (48%), Gaps = 11/459 (2%)
Query: 33 FDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDA 92
FD +P N S + + +P AL F+ N A+S A +G++
Sbjct: 34 FDFIPHPNAASVNHSMLNCLHSRLPFQALTAFKNHFQLHSLENVDEVTVALSLKACQGES 93
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
+ G +IHG SG VSN L+ MY K G A VF+ + +SW ++LS +
Sbjct: 94 KLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGF 153
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
E V L G+A + S L C G Q+HSLV KC L +
Sbjct: 154 ---EESVDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEV 210
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK--ACEAIDLFVKMF 270
F+ L+ +Y++ LD A RVF + DL +W+A+I GYAQ GK EA+ LFV M
Sbjct: 211 FIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMV 270
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
G++ V+ + + A +K GRQ+H L K+G+ + V N ++ YSKCE+ +
Sbjct: 271 RHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPK 330
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
++ F+ + +VVSW +I S +A+ L M G PN T+ +++ +
Sbjct: 331 DAKAVFESISNRNVVSWTTMI-----SIDEEDAVSLFNAMRVNGVYPNDVTFIGLIHAVT 385
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
+ G H +K F S + ++ + MYAK + ++ K+F+ L+ + VSWN
Sbjct: 386 IRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVSWNA 445
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
++ GYAQ+G +EAL Y + +IKPN TF VL+A
Sbjct: 446 LISGYAQNGSYKEALLTY-LSAVKEIKPNQYTFGSVLNA 483
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 227/447 (50%), Gaps = 15/447 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ----IGM 56
++ G V N L+ MY ++ +++A+++FDEMPER+++SW+A+ISG++Q G+
Sbjct: 201 VVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGL 260
Query: 57 PEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNC 116
V L F MV + ++ + GAVSAC + G++IHG + G + V N
Sbjct: 261 EAVLL--FVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNV 318
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
L++ Y KC + A+ VF++ RN +SW +++S + + +F R +GV +
Sbjct: 319 LMSTYSKCEVPKDAKAVFESISNRNVVSWTTMISI-----DEEDAVSLFNAMRVNGVYPN 373
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+ + ++ A + + G+ IH L K ++ V+ I +YAK E + ++++F
Sbjct: 374 DVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFE 433
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI- 295
+ + +W+ALI GYAQ G EA+ ++ + P++ TF VL A A ++
Sbjct: 434 ELNCRETVSWNALISGYAQNGSYKEALLTYLSAVKE-IKPNQYTFGSVLNAIAAAEDISL 492
Query: 296 -GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G+ HS ++K+G + V+ +LD Y K + ES + F+E E +W A+I+ +
Sbjct: 493 NHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIISAY 552
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSN 413
+ + L +M EG P+ T+ ++L ++ G + +VK +
Sbjct: 553 ARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCRKGMVDAGHRVFDSMVKKHSIEPT 612
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHL 440
S +VDM + GRL++A ++ +
Sbjct: 613 SEHYSIMVDMLGRVGRLDEAEELMHQI 639
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 120/224 (53%), Gaps = 7/224 (3%)
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
EVT + L A E+ G Q+H + GF SF V+N+++ Y K ++L F+
Sbjct: 79 EVTVALSLKACQG--ESKLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFE 136
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
+ D+VSWN +++G S +A+ + M + G + TY++ L +
Sbjct: 137 NLSHPDIVSWNTVLSGFEESV---DALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLF 193
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
G Q H +VK G V IG+ALV MY++ G L++AR+VFD + ++LVSWN M+ GYAQ
Sbjct: 194 GWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQ 253
Query: 458 HG--LGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
G G EA+ ++ M + + + + G +SAC H+ +E G
Sbjct: 254 EGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELG 297
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 5/160 (3%)
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
G Q H V GF S V + ++L+ MY K G A VF++LS ++VSWNT+L G+ +
Sbjct: 96 GCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGFEE 155
Query: 458 HGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMD 517
+AL M I + T+ L+ C GW +S++ G+ +
Sbjct: 156 ---SVDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQ-LHSLVVKCGLGCEVF 211
Query: 518 HIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++V +++ G A P E + V W ++SG
Sbjct: 212 IGNALVTMYSRWGMLDEARRVFDEMP-ERDLVSWNAMISG 250
>gi|297799986|ref|XP_002867877.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313713|gb|EFH44136.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 760
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/639 (30%), Positives = 325/639 (50%), Gaps = 47/639 (7%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRIND-AQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +G N+ N LL MY K + D ++F+ + E N +S++ +ISG ++ A
Sbjct: 151 VKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVISGLARENKVLEA 210
Query: 61 LNYFRLM------VCCVLEPNYYTYVGAVSACASRGDARS---GKEIHGRMYRSGLELNS 111
++ FRLM V CV N + C S + GK+IH R G
Sbjct: 211 VHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQIHSLALRRGFVGEL 270
Query: 112 HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
H++N L+ +Y K ++ A+ +F E N +SW +++ + Q ++ R S
Sbjct: 271 HLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYRSDKSIEYLKRMRDS 330
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G +E +C S+LGAC G+++ G
Sbjct: 331 GFEPNEVTCISILGACFRSGDVETG----------------------------------- 355
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
R+F+ I P ++AW+A++ GY+ EAI+ F +M L P T S +L + A +
Sbjct: 356 RRIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCARL 415
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE-MDEHDVVSWNAL 350
+ GG+Q+H + I+ S + + + ++ YS+CE +E FD+ ++E D+ WN++
Sbjct: 416 RFLEGGKQIHGVAIRTETSEDSHIVSGLIAVYSECEKMEICECIFDDCINELDIACWNSM 475
Query: 351 IAGHLASCHYGEAIELLKDMLFEG-HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
I+G + +A+ L + M PN TY+ +L S + ++ G+Q H +VK G
Sbjct: 476 ISGLRRNTLDTKALMLFRRMHQTSVLLPNETTYAIVLGSCSRLCSLVHGRQFHGQVVKSG 535
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ S+ + +A+ DMY KCG + AR+ FD +S KN V WN M+ GYA +G G EA+++Y
Sbjct: 536 YVSDSFVETAVTDMYCKCGEIESARQFFDTVSRKNTVIWNEMIHGYAHNGRGDEAVDLYR 595
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M KP+ TF+ VL+AC H GLV+ G +SM RDHGI P +DH +V
Sbjct: 596 EMISAGEKPDGITFVSVLTACSHSGLVDTGLEILSSMQRDHGIEPELDHYICIVDCLGRA 655
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
G+ A +++P + + V+W LLS C+ + D+ L R AEK++ DP++++A+++LS
Sbjct: 656 GRLEDAETLAEATPYKSSSVLWEILLSSCRVYGDVSLARRVAEKLMHLDPQNSAAYVLLS 715
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKM 628
N Y+ WD+ A ++++M + + K G SW N +
Sbjct: 716 NTYSSVRQWDDAAALQELMNKNRVHKTPGHSWITYGNDL 754
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/562 (25%), Positives = 268/562 (47%), Gaps = 51/562 (9%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V ++N L K + +A ++FD MPER+V+SW+ +IS + G E AL+ + MV
Sbjct: 57 DVYSWNAFLTFRCKVGDLEEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMV 116
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG-LL 127
P+ +T +SAC+ D G HG ++GL+ N V N L++MY KCG ++
Sbjct: 117 GDGFLPSRFTLASVLSACSKVQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMV 176
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG-- 185
VF++ E N +S+ +++S + + + + +F L + GV + +++L
Sbjct: 177 DYGVRVFESLSEPNEVSFTTVISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSIS 236
Query: 186 ----ACAVL----GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
C L GN+ +G QIHSL + + + L+ +YAK + ++ A +F+
Sbjct: 237 VPREGCDSLSEIYGNV-LGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTE 295
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ ++ +W+ +I G+ Q ++ ++I+ +M SG P+EVT +LGA + G
Sbjct: 296 MPEVNVVSWNIMIAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETG 355
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
R++ + I + S++ N +L YS E
Sbjct: 356 RRIFNTIPQPSVSAW----NAMLSGYSNYE------------------------------ 381
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
HY EAI + M F+ P+ T S IL+ + + +E GKQ H ++ + I
Sbjct: 382 -HYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETSEDSHIV 440
Query: 418 SALVDMYAKCGRLNDARKVFDH-LSSKNLVSWNTMLVGYAQHGLGREALEIYSMM-QENK 475
S L+ +Y++C ++ +FD ++ ++ WN+M+ G ++ L +AL ++ M Q +
Sbjct: 441 SGLIAVYSECEKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSV 500
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+ PN+ T+ VL +C + + G + +++ +S A V ++ G+ A
Sbjct: 501 LLPNETTYAIVLGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVETA-VTDMYCKCGEIESA 559
Query: 536 YEFIKSSPIEPNKVVWRCLLSG 557
+F + N V+W ++ G
Sbjct: 560 RQFFDTVS-RKNTVIWNEMIHG 580
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 204/449 (45%), Gaps = 76/449 (16%)
Query: 101 RMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVH 160
R R+GL ++++ N L+++Y + G A+ +FD R+ SW + L+ C+ G+
Sbjct: 17 RDERTGLNSDTYLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVGDLEE 76
Query: 161 GLKIF----------------LLSRK---------------SGVAISEFSCASVLGACAV 189
++F +L RK G S F+ ASVL AC+
Sbjct: 77 ACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLASVLSACSK 136
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE-KLDLASRVFSNIQLPDLTAWSA 248
+ + +GM+ H + K L+ + FV L+++YAKC +D RVF ++ P+ +++
Sbjct: 137 VQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTT 196
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG---------AFADVKETIGGRQ 299
+I G A+ K EA+ +F M G+ V S +L + +++ + G+Q
Sbjct: 197 VISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQ 256
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+HSL ++ GF + N++L+ Y+K + + + F EM E +VVSWN +IAG
Sbjct: 257 IHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYR 316
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
++IE LK M G PN T CI ++G+
Sbjct: 317 SDKSIEYLKRMRDSGFEPNEVT----------------------CI--------SILGAC 346
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
+ G + R++F+ + ++ +WN ML GY+ + EA+ + MQ +KP+
Sbjct: 347 F-----RSGDVETGRRIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLKPD 401
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
T +LS+C + +E G IR
Sbjct: 402 RTTLSVILSSCARLRFLEGGKQIHGVAIR 430
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 151/289 (52%), Gaps = 2/289 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M SGF PN +T +L + + +++F+ +P+ +V +W+A++SG+S E A
Sbjct: 327 MRDSGFEPNEVTCISILGACFRSGDVETGRRIFNTIPQPSVSAWNAMLSGYSNYEHYEEA 386
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+N FR M L+P+ T +S+CA GK+IHG R+ +SH+ + LI +
Sbjct: 387 INNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETSEDSHIVSGLIAV 446
Query: 121 YGKCGLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI-SEF 178
Y +C + + +FD + I+ W S++S + L +F ++ V + +E
Sbjct: 447 YSECEKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVLLPNET 506
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ A VLG+C+ L +L G Q H V K D FV + ++Y KC +++ A + F +
Sbjct: 507 TYAIVLGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDTV 566
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ W+ +I GYA G+ EA+DL+ +M S+G P +TF VL A
Sbjct: 567 SRKNTVIWNEMIHGYAHNGRGDEAVDLYREMISAGEKPDGITFVSVLTA 615
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 199/406 (49%), Gaps = 30/406 (7%)
Query: 213 FVAMGLINLYA-------KCEKLDL--ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
F M L ++Y+ +C+ DL A VF + D+ +W+ +I + G +A+
Sbjct: 50 FDEMSLRDVYSWNAFLTFRCKVGDLEEACEVFDGMPERDVVSWNNMISVLVRKGFEEKAL 109
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
D++ +M G +PS T + VL A + V++ + G + H + +K G FV N +L Y
Sbjct: 110 DVYGRMVGDGFLPSRFTLASVLSACSKVQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMY 169
Query: 324 SKCE-LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
+KC +++ ++ F+ + E + VS+ +I+G EA+ + + M +G +
Sbjct: 170 AKCGFMVDYGVRVFESLSEPNEVSFTTVISGLARENKVLEAVHMFRLMCEKGVQVDCVCL 229
Query: 383 SNILNIS---------SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
SNIL+IS S+I GKQ H ++ GF + + ++L+++YAK +N A
Sbjct: 230 SNILSISVPREGCDSLSEIYGNVLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGA 289
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+F + N+VSWN M+ G+ Q +++E M+++ +PN+ T I +L AC
Sbjct: 290 ELIFTEMPEVNVVSWNIMIAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRS 349
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA---YEFIKSSPIEPNKVV 550
G VE G FN++ + P + +++ ++ A + ++ ++P++
Sbjct: 350 GDVETGRRIFNTIPQ-----PSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTT 404
Query: 551 WRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIM--LSNVYAE 594
+LS C + L G+ + T+ + S HI+ L VY+E
Sbjct: 405 LSVILSSCARLRFLEGGKQIHGVAIRTETSEDS-HIVSGLIAVYSE 449
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 167/390 (42%), Gaps = 87/390 (22%)
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE--- 362
+ G +S T++ N +LD Y + + + K FDEM DV SWNA + C G+
Sbjct: 20 RTGLNSDTYLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLT---FRCKVGDLEE 76
Query: 363 -------------------------------AIELLKDMLFEGHCPNLYTYSNILNISSD 391
A+++ M+ +G P+ +T +++L+ S
Sbjct: 77 ACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLASVLSACSK 136
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND-ARKVFDHLSSKNLVSWNT 450
+ G + H VK G D N+ +G+AL+ MYAKCG + D +VF+ LS N VS+ T
Sbjct: 137 VQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTT 196
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIK--------------PND------NTFIGVLSAC 490
++ G A+ EA+ ++ +M E ++ P + + VL
Sbjct: 197 VISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQ 256
Query: 491 VHIGLVEEGW----HYFNSMIRDHGISPRMD------------HIASVVHLFACRGQTRR 534
+H + G+ H NS++ + + M+ ++ S + A GQ R
Sbjct: 257 IHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYR 316
Query: 535 AYEFI------KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSA--HI 586
+ + I + S EPN+V +L C D+ GR +I +T P+ + + +
Sbjct: 317 SDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGR----RIFNTIPQPSVSAWNA 372
Query: 587 MLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
MLS Y+ ++E + M+ ++LK D
Sbjct: 373 MLSG-YSNYEHYEEAINNFRQMQFQNLKPD 401
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG+ + + MY K I A++ FD + +N + W+ +I G++ G + A
Sbjct: 531 VVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDTVSRKNTVIWNEMIHGYAHNGRGDEA 590
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
++ +R M+ +P+ T+V ++AC+ G +G EI M R G+E C+++
Sbjct: 591 VDLYREMISAGEKPDGITFVSVLTACSHSGLVDTGLEILSSMQRDHGIEPELDHYICIVD 650
Query: 120 MYGKCGLLSSAQFVFDAS-LERNSISWVSLLSS 151
G+ G L A+ + +A+ + +S+ W LLSS
Sbjct: 651 CLGRAGRLEDAETLAEATPYKSSSVLWEILLSS 683
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 185/618 (29%), Positives = 331/618 (53%), Gaps = 41/618 (6%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERN- 141
+ C + D R+GK +H +S + ++++SN + +Y KC LS+A+ VFD + + N
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74
Query: 142 ------------------------------SISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
S+S+ +L+++Y + G+ ++FL R++
Sbjct: 75 FSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA 134
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLD 229
+ + F+ + ++ AC + N+ + Q+H+L L D +V++G LI Y+K L
Sbjct: 135 FLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGL--DSYVSVGNALITSYSKNGFLK 190
Query: 230 LASRVFSNI-QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
A R+F + + D +W++++ Y Q + +A++L+++M GL+ T + VL AF
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE-LLEESLKTFDEMDEHDVVSW 347
+V++ +GG Q H+ +IK G+ + V + ++D YSKC + + K FDE+ D+V W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310
Query: 348 NALIAGH-LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
N +I+G+ L EA+E + + GH P+ + +++ S++ + G+Q H +
Sbjct: 311 NTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLAL 370
Query: 407 KPGFDSN-VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
K SN + + +AL+ MY+KCG L DA+ +FD + N VS+N+M+ GYAQHG+G ++L
Sbjct: 371 KLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSL 430
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
++ M E P + TFI VL+AC H G VE+G YFN M + GI P H + ++ L
Sbjct: 431 HLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDL 490
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
G+ A I++ P +P W LL C+ H ++ L AA ++L DP + + +
Sbjct: 491 LGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPY 550
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLH 645
+ML+N+Y++ + A VRK+M+++ +KK GCSW E+ ++H F +
Sbjct: 551 VMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQ 610
Query: 646 EVMNQLSVHLFDGGYVPD 663
E + ++ + GY P+
Sbjct: 611 EYLEEMMRKIKKVGYTPE 628
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 234/458 (51%), Gaps = 10/458 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
NV ++N L+ Y K S + A +LFDEMP+ + +S++ LI+ +++ G + A F M
Sbjct: 73 NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
L+ + +T G ++AC + +++H +GL+ V N LI Y K G L
Sbjct: 133 EAFLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190
Query: 129 SAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A+ +F S +R+ +SW S++ +Y Q E L+++L G+ + F+ ASVL A
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR-VFSNIQLPDLTAW 246
+ +L G+Q H+ + K + V GLI+LY+KC L R VF I PDL W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310
Query: 247 SALIGGYAQLGK-ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
+ +I GY+ + EA++ F ++ G P + + V+ A +++ GRQ+H L +
Sbjct: 311 NTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLAL 370
Query: 306 KMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
K+ S V N ++ YSKC L ++ FD M EH+ VS+N++IAG+ +++
Sbjct: 371 KLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSL 430
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--SALVD 422
L + ML G P T+ ++L + +E GK + ++K F G S ++D
Sbjct: 431 HLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHFSCMID 489
Query: 423 MYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+ + G+L++A ++ + + W+ +L HG
Sbjct: 490 LLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHG 527
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 199/658 (30%), Positives = 334/658 (50%), Gaps = 11/658 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE-RNVISWSALISGFSQIGMPEV 59
+I GF N ++ Y++ + A +F+ M R+ +SW+ LI G G
Sbjct: 73 LIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVA 132
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L +F EPN T V + AC G G +HG + +SG S V N L++
Sbjct: 133 GLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLS 192
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK----SGVAI 175
MY + A+ +FD E++ I+W ++ Y Q E GL++F RK G+
Sbjct: 193 MYVDADM-ECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMF---RKMVLVPGIEP 248
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
SVL ACA ++ G +H LV + D FV LI++Y+KC+ A +VF
Sbjct: 249 DGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVF 308
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ I + +W++++ G+ EA L M + EVT +L
Sbjct: 309 NEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPF 368
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
+ +H ++I+ G + V + ++D Y+KC L+E + + F M DVVSW+ +I+G
Sbjct: 369 HCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFA 428
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
EAI + ++M + PN+ T N+L S ++ K H ++ GF S V
Sbjct: 429 HCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVT 488
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+G+A+VDMY+KCG + +R+ FD L+ KN+V+W+ M+ Y +GL EAL +++ M+ +
Sbjct: 489 VGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHG 548
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+KPN T + VL+AC H GLVEEG F SM+++ G+ P +H + +V + G+ A
Sbjct: 549 LKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTA 608
Query: 536 YEFIKSSP--IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
E IK+ P ++ +W LLS C+++ LG+ A ++L +P +++ +++ S++YA
Sbjct: 609 IEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVASSMYA 668
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
+WD+ A++R + KEK +K G S + NK F + + ++ + QL
Sbjct: 669 ADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAGDGSHPRSDEIFSMAQQL 726
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 238/471 (50%), Gaps = 13/471 (2%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
R GK +H + + G + + + N ++ Y +CG A VF++ R+S+SW L+
Sbjct: 64 RHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHG 123
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
+ G V GL F +R +G + + V+ AC +LG G+ +H + K
Sbjct: 124 HLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAI 183
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM-F 270
V L+++Y + ++ A +F + D+ AWS +IGGY Q + + +F KM
Sbjct: 184 SSVQNSLLSMYVDAD-MECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVL 242
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
G+ P V VL A A ++ GR +H L+I GF FV N+++D YSKC+
Sbjct: 243 VPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAG 302
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
+ K F+E+ + + VSWN++++G + + +Y EA L+ M E + T NIL I
Sbjct: 303 SAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICK 362
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
K HC +++ G ++N ++ SAL+D YAKC + A +VF + +++VSW+T
Sbjct: 363 YFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWST 422
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC-VHIGLVEEGWHYFNSMIRD 509
M+ G+A G EA+ +Y M + +KPN T I +L AC V L W + IR
Sbjct: 423 MISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAH-GVAIR- 480
Query: 510 HGISPRMDHIASVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRCLLSG 557
G + + +VV +++ G+ +RRA++ + N V W +++
Sbjct: 481 QGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALK----NIVTWSAMIAA 527
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 8/262 (3%)
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVT-FSYVLGAFAD 290
S + S +LP+ W I + GK E + + ++ +G+ +V+ F +L A++
Sbjct: 4 SAIVSGSKLPN---WILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSF 60
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSWNA 349
+ G+ LH+ +IK GF SFT + N+++ FY +C + ++ F+ M D VSWN
Sbjct: 61 LSHR-HGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNI 119
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
LI GHL + + + G PN+ T ++ + G H ++K G
Sbjct: 120 LIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSG 179
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY- 468
F + + ++L+ MY + AR++FD + K++++W+ M+ GY Q + L+++
Sbjct: 180 FWAISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFR 238
Query: 469 SMMQENKIKPNDNTFIGVLSAC 490
M+ I+P+ + VL AC
Sbjct: 239 KMVLVPGIEPDGVVMVSVLKAC 260
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/499 (33%), Positives = 277/499 (55%), Gaps = 7/499 (1%)
Query: 169 RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
R++GV S + +L A L + Q H+ + K + D FV LI+ Y+ C
Sbjct: 96 RRNGVVPSRHTFPPLLKAVFKLRDAN-PFQFHAHILKFGFDSDLFVRNSLISGYSNCGLF 154
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
+ SRVF + D+ +W+A+I G+ + + EA+ FV+M SG+ +E+T VL A
Sbjct: 155 EFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKAT 214
Query: 289 ADVKETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSW 347
++ GR +H ++ G F+ ++++D Y KC +++ K FDEM +VV+W
Sbjct: 215 RKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTW 274
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
ALIAG++ + + + + ++ML PN T S++L+ + + A+ G++ HC ++K
Sbjct: 275 TALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIK 334
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
+ N +G+ L+D YAKCG L +A VF+ L KN+ +W M+ G+A HG A+++
Sbjct: 335 NSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDL 394
Query: 468 YSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA 527
+ M + + PN+ TFI VLSAC H GLVEEG F SM + P+ DH A +V LF
Sbjct: 395 FHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFG 454
Query: 528 CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIM 587
+G A I+ P+EP VW L C HKD LG+YAA +++ P + + +
Sbjct: 455 RKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYELGKYAASRVIKLQPSHSGRYTL 514
Query: 588 LSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF-STSRFAQFQGIDLHE 646
L+N+Y+E+ WD+ A+VRK MK++ + K GCSW E++ K+H F + + DL++
Sbjct: 515 LANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIEVKGKLHEFIAFDDKKPLESDDLYK 574
Query: 647 VMNQLSVHLFDGGYVPDPI 665
++ + V + +PD +
Sbjct: 575 TLDNVGVQM----RLPDEL 589
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 177/359 (49%), Gaps = 3/359 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF ++ N L+ Y ++FD +++V+SW+A+I GF + A+ YF
Sbjct: 133 GFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYF 192
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNCLINMYGK 123
M + N T V + A D R G+ IHG +G + + + + L++MYGK
Sbjct: 193 VEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGK 252
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG AQ VFD RN ++W +L++ Y Q G+ +F KS VA +E + +SV
Sbjct: 253 CGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSV 312
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L ACA +G L G ++H V K ++E + V LI+ YAKC L+ A VF ++ ++
Sbjct: 313 LSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNV 372
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH-S 302
W+A+I G+A G A A+DLF M SS + P+EVTF VL A A GR+L S
Sbjct: 373 YTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLS 432
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHY 360
+ + ++D + + LLEE+ + M E W AL L Y
Sbjct: 433 MKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDY 491
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 210/421 (49%), Gaps = 15/421 (3%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNY--FRLMVCCVLEPNYYTYVGAVSAC 86
A++L ++ ++ W +L+ FS L++ +R M + P+ +T+ + A
Sbjct: 55 ARRLLCQIQTPSIQLWDSLVGHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAV 114
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV 146
DA + + H + + G + + V N LI+ Y CGL VFD + +++ +SW
Sbjct: 115 FKLRDA-NPFQFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWT 173
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
+++ + + + + F+ ++SGVA +E + SVL A +++ G IH +
Sbjct: 174 AMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEA 233
Query: 207 A-LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACE-AID 264
+ D F+ L+++Y KC D A +VF + ++ W+ALI GY Q G+ E +
Sbjct: 234 GRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQ-GRCFEKGMF 292
Query: 265 LFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYS 324
+F +M S + P+E T S VL A A V GR++H +IK T V T++DFY+
Sbjct: 293 VFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYA 352
Query: 325 KCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSN 384
KC LEE++ F+ + E +V +W A+I G A + A++L ML PN T+
Sbjct: 353 KCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIV 412
Query: 385 ILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
+L+ + +E G++ + ++P D + +VD++ + G L +A+ + +
Sbjct: 413 VLSACAHGGLVEEGRRLFLSMKERFNLEPKADHY----ACMVDLFGRKGLLEEAKALIER 468
Query: 440 L 440
+
Sbjct: 469 M 469
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + N L+ Y K + +A +F+ + E+NV +W+A+I+GF+ G A
Sbjct: 332 VIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGA 391
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMY-RSGLELNSHVSNCLIN 119
++ F M+ + PN T++ +SACA G G+ + M R LE + C+++
Sbjct: 392 VDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVD 451
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
++G+ GLL A+ + + +E + W +L S
Sbjct: 452 LFGRKGLLEEAKALIERMPMEPTNAVWGALFGS 484
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 199/658 (30%), Positives = 334/658 (50%), Gaps = 11/658 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPE-RNVISWSALISGFSQIGMPEV 59
+I GF N ++ Y++ + A +F+ M R+ +SW+ LI G G
Sbjct: 73 LIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVA 132
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L +F EPN T V + AC G G +HG + +SG S V N L++
Sbjct: 133 GLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLS 192
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK----SGVAI 175
MY + A+ +FD E++ I+W ++ Y Q E GL++F RK G+
Sbjct: 193 MYVDADM-ECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMF---RKMVLVPGIEP 248
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
SVL ACA ++ G +H LV + D FV LI++Y+KC+ A +VF
Sbjct: 249 DGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVF 308
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ I + +W++++ G+ EA L M + EVT +L
Sbjct: 309 NEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPF 368
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
+ +H ++I+ G + V + ++D Y+KC L+E + + F M DVVSW+ +I+G
Sbjct: 369 HCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFA 428
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
EAI + ++M + PN+ T N+L S ++ K H ++ GF S V
Sbjct: 429 HCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVT 488
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENK 475
+G+A+VDMY+KCG + +R+ FD L+ KN+V+W+ M+ Y +GL EAL +++ M+ +
Sbjct: 489 VGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHG 548
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+KPN T + VL+AC H GLVEEG F SM+++ G+ P +H + +V + G+ A
Sbjct: 549 LKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTA 608
Query: 536 YEFIKSSP--IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
E IK+ P ++ +W LLS C+++ LG+ A ++L +P +++ +++ S++YA
Sbjct: 609 IEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVASSMYA 668
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
+WD+ A++R + KEK +K G S + NK F + + ++ + QL
Sbjct: 669 ADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAGDGSHPRSDEIFSMAQQL 726
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 238/471 (50%), Gaps = 13/471 (2%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
R GK +H + + G + + + N ++ Y +CG A VF++ R+S+SW L+
Sbjct: 64 RHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHG 123
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
+ G V GL F +R +G + + V+ AC +LG G+ +H + K
Sbjct: 124 HLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAI 183
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM-F 270
V L+++Y + ++ A +F + D+ AWS +IGGY Q + + +F KM
Sbjct: 184 SSVQNSLLSMYVDAD-MECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVL 242
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
G+ P V VL A A ++ GR +H L+I GF FV N+++D YSKC+
Sbjct: 243 VPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAG 302
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
+ K F+E+ + + VSWN++++G + + +Y EA L+ M E + T NIL I
Sbjct: 303 SAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICK 362
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
K HC +++ G ++N ++ SAL+D YAKC + A +VF + +++VSW+T
Sbjct: 363 YFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWST 422
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC-VHIGLVEEGWHYFNSMIRD 509
M+ G+A G EA+ +Y M + +KPN T I +L AC V L W + IR
Sbjct: 423 MISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAH-GVAIR- 480
Query: 510 HGISPRMDHIASVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRCLLSG 557
G + + +VV +++ G+ +RRA++ + N V W +++
Sbjct: 481 QGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALK----NIVTWSAMIAA 527
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 8/262 (3%)
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVT-FSYVLGAFAD 290
S + S +LP+ W I + GK E + + ++ +G+ +V+ F +L A++
Sbjct: 4 SAIVSGSKLPN---WILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSF 60
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSWNA 349
+ G+ LH+ +IK GF SFT + N+++ FY +C + ++ F+ M D VSWN
Sbjct: 61 LSHR-HGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNI 119
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
LI GHL + + + G PN+ T ++ + G H ++K G
Sbjct: 120 LIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSG 179
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY- 468
F + + ++L+ MY + AR++FD + K++++W+ M+ GY Q + L+++
Sbjct: 180 FWAISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFR 238
Query: 469 SMMQENKIKPNDNTFIGVLSAC 490
M+ I+P+ + VL AC
Sbjct: 239 KMVLVPGIEPDGVVMVSVLKAC 260
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 198/671 (29%), Positives = 346/671 (51%), Gaps = 14/671 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFS-QIGMPEVALN 62
S ++ LL Y K + A ++F + ++I W+A I + P+ AL
Sbjct: 160 SDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALL 219
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
R M L PN ++V +S+C + IH R+ G + V+ L+ MYG
Sbjct: 220 LVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYG 279
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
+CG + + VF+A RN +SW ++++++ QCG I+ ++ G ++ + +
Sbjct: 280 RCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVT 339
Query: 183 VLGACAVLGNLKVG--MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
L A + +G +H + LE D V L+ +Y +D A F I
Sbjct: 340 ALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPA 399
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+A++ Y G+A EA++LF M L P++V++ VLG DV E R +
Sbjct: 400 KNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE---ARSI 456
Query: 301 HSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H+ ++ G F+ + +AN V+ +++ LEE++ FD D VSWN +A A
Sbjct: 457 HAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSARED 516
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
AI M EG P+ +T +++++ +D+ +E G+ + + +VV+ S
Sbjct: 517 LHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVES 576
Query: 419 ALVDMYAKCGR-LNDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGREALEIYSMMQE-N 474
A+++M AKCG +++ ++F + K+LV+WNTM+ YAQHG GR+AL+++ +MQ+ +
Sbjct: 577 AVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRS 636
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR-MDHIASVVHLFACRGQTR 533
++P+ +TF+ VLS C H GLVE+G H F GI + ++H A +V + G R
Sbjct: 637 SVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLR 696
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A +FI+ P+ + VVW LL C ++ DL G AA + D+ +++LSN+YA
Sbjct: 697 EAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYA 756
Query: 594 EANMWDETAKVRKIMKEKSLKKDT-GCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
A W+++ +VR+ M E+ +KK G S ++N++H F + Q +++ + +L
Sbjct: 757 AAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAELERLK 816
Query: 653 VHLFDGGYVPD 663
+ + GYVPD
Sbjct: 817 GLIREAGYVPD 827
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 232/497 (46%), Gaps = 15/497 (3%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T G + C D G+++H ++ + GL N + N L+ MY KC L A F A
Sbjct: 26 TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA------VLG 191
R +W +L+++ L ++ + + +VLGA A
Sbjct: 86 RSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSSS 145
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG 251
+ +H + LE D FVA L++ Y KC ++ A VFS IQ+PDL W+A I
Sbjct: 146 SRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIM 205
Query: 252 GYA-QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
A + A+ L +M+ GL+P+ +F +L + D R +H+ + ++GF
Sbjct: 206 ACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFL 265
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
VA ++ Y +C ++ES+ F+ M + VSWNA+IA H A + M
Sbjct: 266 GDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRM 325
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQT--HCCIVKPGFDSNVVIGSALVDMYAKCG 428
EG PN T+ L + + + G+ H I G + +V++G+ALV MY G
Sbjct: 326 QQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTG 385
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
++ AR FD + +KN+VSWN ML Y +G REA+E+++ M+ + PN +++ VL
Sbjct: 386 AIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLG 445
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS-VVHLFACRGQTRRAYEFIKSSPIEPN 547
C + ++ + +G+ + IA+ VV +FA G A ++ ++ +
Sbjct: 446 CCEDVSEARS----IHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVK-D 500
Query: 548 KVVWRCLLSGCKTHKDL 564
V W ++ +DL
Sbjct: 501 SVSWNTKVAALSAREDL 517
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/517 (25%), Positives = 228/517 (44%), Gaps = 29/517 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G N + N+L+ MY K ++DA F + R + +W+ LI+ S P
Sbjct: 50 IVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSS---PAAV 106
Query: 61 LN-YFRLMVCCVLE--PNYYTYVGAVSACASRGDAR-------SGKEIHGRMYRSGLELN 110
+ Y R+ + E PN T + + A AS GD + +H + S LE +
Sbjct: 107 FDLYTRMKLEERAENRPNRLTIIAVLGAIAS-GDPSSSSSSRAQARIVHDDIRGSDLERD 165
Query: 111 SHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK 170
V+ L++ YGKCG + SA VF + I W + + + C + + L+ R
Sbjct: 166 LFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMA-CAGNDERPDRALLLVRRM 224
Query: 171 --SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL 228
G+ + S ++L +C +L + IH+ V + D VA L+ +Y +C +
Sbjct: 225 WLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSV 284
Query: 229 DLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
D + VF + + + +W+A+I +AQ G A ++ +M G P+++TF L A
Sbjct: 285 DESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAA 344
Query: 289 -----ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHD 343
D+ E+ LH I G V ++ Y ++ + FD + +
Sbjct: 345 CSSSSQDLGESAA---LHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKN 401
Query: 344 VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHC 403
+VSWNA++ + + EA+EL M + PN +Y +L D+ + H
Sbjct: 402 IVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE---ARSIHA 458
Query: 404 CIVKPG-FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGR 462
+V G F I + +V M+A+ G L +A FD K+ VSWNT + +
Sbjct: 459 EVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLH 518
Query: 463 EALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
A+ + MQ +P+ T + V+ C +G +E G
Sbjct: 519 GAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELG 555
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/484 (34%), Positives = 277/484 (57%), Gaps = 2/484 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
++L C ++ G ++H+ + K ++ LI LY KC+ L A +F +
Sbjct: 95 TILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQK 154
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ +W+A+I Y+Q G A EA++LFV+M S P+ TF+ +L + GRQ+H
Sbjct: 155 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 214
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
S+ IK + S FV +++LD Y+K + ++ F + E DVV+ A+I+G+
Sbjct: 215 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 274
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA++L + + EG N TY+++L S + A+ GKQ H +++ G S VV+ ++L+
Sbjct: 275 EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLI 334
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM-QENKIKPND 480
DMY+KCG + AR++FD + + +SWN MLVGY++HG+ RE LE++ +M +ENK+KP+
Sbjct: 335 DMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDS 394
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIR-DHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
T++ VLS C H L + G F +M+ GI P + H VV L G+ A++FI
Sbjct: 395 ITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFI 454
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
K P P +W LL C+ H D+ +G +K+L +PE+ +++LSN+YA A W+
Sbjct: 455 KKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWE 514
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ +R +M+EK++ K+ G SW EL +H F S + ++ + + +LS+ + G
Sbjct: 515 DMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKEDG 574
Query: 660 YVPD 663
YVPD
Sbjct: 575 YVPD 578
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 197/387 (50%), Gaps = 10/387 (2%)
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
E + Y ++ C S+ R G+ +H M ++ + ++ LI +Y KC L A+
Sbjct: 87 EVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARE 146
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
+FD ++N +SW +++S+Y Q G L +F+ +S + F+ A++L +C
Sbjct: 147 MFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLG 206
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+ G QIHS+ K E FV L+++YAK ++ A VF + D+ A +A+I G
Sbjct: 207 FETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISG 266
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
YAQ+G EA+ LF ++ G+ + VT++ VL A + + G+Q+HS +++ G S+
Sbjct: 267 YAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSY 326
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+ N+++D YSKC + + + FD M E +SWNA++ G+ E +EL K M
Sbjct: 327 VVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMRE 386
Query: 373 EGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIV--KPGFDSNVVIGSALVDMYAKCGR 429
E P+ TY +L+ S + G + +V K G + ++ +VD+ + GR
Sbjct: 387 ENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGR 446
Query: 430 LNDARKVFDHLSSKNLVS----WNTML 452
+ +A FD + V W ++L
Sbjct: 447 VEEA---FDFIKKMPFVPTAAIWGSLL 470
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 188/369 (50%), Gaps = 6/369 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + + P+V L+++Y K + DA+++FDEMP++NV+SW+A+IS +SQ G A
Sbjct: 116 MIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEA 175
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
LN F M+ EPN++T+ +++C +G++IH + E + V + L++M
Sbjct: 176 LNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDM 235
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A VF ER+ ++ +++S Y Q G LK+F + G+ + +
Sbjct: 236 YAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTY 295
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASVL A + L L G Q+HS V + + LI++Y+KC + A R+F ++
Sbjct: 296 ASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPE 355
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFADVK-ETIGGR 298
+W+A++ GY++ G A E ++LF M + P +T+ VL + + E +G
Sbjct: 356 RTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLE 415
Query: 299 QLHSLII-KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
++++ K G V+D + +EE+ FD + + V A+ L S
Sbjct: 416 IFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA---FDFIKKMPFVPTAAIWGSLLGS 472
Query: 358 CHYGEAIEL 366
C +E+
Sbjct: 473 CRVHSDVEI 481
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%)
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
C G+ E L M G Y ILN AI G++ H ++K + +V +
Sbjct: 69 CSSGQLKEALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLR 128
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ L+ +Y KC L DAR++FD + KN+VSW M+ Y+Q G EAL ++ M + +
Sbjct: 129 TRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTE 188
Query: 478 PNDNTFIGVLSAC 490
PN TF +L++C
Sbjct: 189 PNHFTFATILTSC 201
>gi|223635620|sp|O49680.2|PP324_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19220, mitochondrial; Flags: Precursor
Length = 951
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 198/638 (31%), Positives = 340/638 (53%), Gaps = 20/638 (3%)
Query: 1 MITSGFHP--NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPE 58
+I SG+ P +V N ++ MY K A+ +F+E+ R+VIS +A+++GF+ GM E
Sbjct: 315 VIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFE 374
Query: 59 VALNYFRLMVCC-VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH---VS 114
A M ++P+ T V S C +R G+ +HG R +E+ S V
Sbjct: 375 EAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVR--MEMQSRALEVI 432
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N +I+MYGKCGL + A+ +F + R+ +SW S++S++ Q G H K S +
Sbjct: 433 NSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNG-FTHKAKNLFKEVVSEYS 491
Query: 175 ISEFSCASVLG---ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
S+FS ++VL +C +L G +H + K + A +IN+Y C L A
Sbjct: 492 CSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSA 551
Query: 232 -SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSE-VTFSYVLGAFA 289
R+ + + DLT+W+++I G A G E++ F M G + + +T + A
Sbjct: 552 FLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASG 611
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
++ + GR H L IK T + NT++ Y +C+ +E ++K F + + ++ SWN
Sbjct: 612 NLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNC 671
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I+ + E +L +++ E PN T+ +L+ S+ + + +G Q HC +++ G
Sbjct: 672 VISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRG 728
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
F +N + +ALVDMY+ CG L KVF + ++ +WN+++ + HG+G +A+E++
Sbjct: 729 FQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFK 788
Query: 470 MMQEN-KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
+ N +++PN ++FI +LSAC H G ++EG Y+ M G+ P +H +V +
Sbjct: 789 ELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGR 848
Query: 529 RGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIM 587
G+ R AYEFI + EP K VW LLS C H D LG+ AE + +P++ S +I
Sbjct: 849 AGKLREAYEFI-TGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYIS 907
Query: 588 LSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQ 625
L+N Y W+E ++RK++++ +LKK G S +++
Sbjct: 908 LANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDVR 945
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 155/568 (27%), Positives = 274/568 (48%), Gaps = 14/568 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G ++ T + LL Y + + + LFDE+ E++VI W+++I+ +Q G A+ F
Sbjct: 117 GLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLF 176
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M+ E + T + A SA +S +R +H +GL +S + N L+N+Y K
Sbjct: 177 IEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKG 236
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
LSSA+ VF R+ +SW ++++ G L+ F SG + + V+
Sbjct: 237 ENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLASRVFSNIQLPD 242
AC+ + L +G +H LV K + V++G +I++Y+KC + A VF + D
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRD 356
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+ + +A++ G+A G EA + +M S + P T + D+ + GR +H
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 302 SLIIKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
++M S V N+V+D Y KC L ++ F D+VSWN++I+ +
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFT 476
Query: 361 GEAIELLKDMLFEGHCP--NLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+A L K+++ E C +L T IL ++ +GK HC + K GF N++ +
Sbjct: 477 HKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSAN 536
Query: 419 ALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKI 476
++++MY C L A + +S +++L SWN+++ G A G E+L + +M +E KI
Sbjct: 537 SVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKI 596
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
+ + T +G +SA ++GLV +G + I+ S R L G+ +
Sbjct: 597 RHDLITLLGTISASGNLGLVLQGRCFHGLAIK----SLRELDTQLQNTLITMYGRCKDIE 652
Query: 537 EFIKSSPI--EPNKVVWRCLLSGCKTHK 562
+K + +PN W C++S +K
Sbjct: 653 SAVKVFGLISDPNLCSWNCVISALSQNK 680
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 234/484 (48%), Gaps = 19/484 (3%)
Query: 89 RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
R + + + +H + GL + S+ L+ YG+ G L S+ +FD E++ I W S+
Sbjct: 100 RTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSM 159
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
+++ Q G ++ + +F+ G + A + L + +H L + L
Sbjct: 160 ITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGL 219
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
D + L+NLYAK E L A VF++++ D+ +W+ ++ G +++ F
Sbjct: 220 VGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKS 279
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS--SFTFVANTVLDFYSKC 326
M SG VTFS V+ A + ++E G LH L+IK G+S + V N+++ YSKC
Sbjct: 280 MTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKC 339
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDML-FEGHCPNLYTYSNI 385
E + F+E+ DV+S NA++ G A+ + EA +L M + P++ T +I
Sbjct: 340 GDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSI 399
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVV-IGSALVDMYAKCGRLNDARKVFDHLSSKN 444
+I D+ G+ H V+ S + + ++++DMY KCG A +F + ++
Sbjct: 400 TSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRD 459
Query: 445 LVSWNTMLVGYAQHGLGREALEIYS--MMQENKIKPNDNTFIGVLSAC-----VHIGLVE 497
LVSWN+M+ ++Q+G +A ++ + + + K + +T + +L++C + G
Sbjct: 460 LVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSV 519
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLF-ACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
W ++ G M SV++++ CR T A+ +++ + W ++S
Sbjct: 520 HCW------LQKLGFGDNMLSANSVINMYIGCRDLT-SAFLRLETMSETRDLTSWNSVIS 572
Query: 557 GCKT 560
GC +
Sbjct: 573 GCAS 576
>gi|302756099|ref|XP_002961473.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
gi|300170132|gb|EFJ36733.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
Length = 643
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 192/603 (31%), Positives = 308/603 (51%), Gaps = 6/603 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N L+ Y K + DA+++FD + RN+ SW+ ++ ++ G AL F
Sbjct: 42 GFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQRRNIFSWTIMLGAYADNGHGREALGLF 101
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
R + + + T V A+ ACA GD G+ IH G E V+ L++MYGKC
Sbjct: 102 REIQSRGMAIDNVTLVSALKACAVAGDLEEGRGIHASARSLGYESEIIVATALVSMYGKC 161
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G L A+ VF +ERN +SW ++L++Y Q G ++++ L G+ + SVL
Sbjct: 162 GHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVL 221
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
G + G +IH V + + +A L+++Y ++D A VF I +
Sbjct: 222 DGWK--GEGEHGTRIHDQVLESGFGSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTVV 279
Query: 245 AWSALIGGYAQLGKACEAIDLFVKM---FSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
+W+A++ YAQ G+ +A+DLF KM + + P+ VTF +L A A GR++H
Sbjct: 280 SWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIH 339
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ + +G S V +++ YS+C L + FD + ++VSWN LI +
Sbjct: 340 AEVASLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGK 399
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA+ + + M EG P+ +T+ ++L+ S A+ GK H I G + + IG+AL+
Sbjct: 400 EALGVHQKMELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASGLERDEAIGTALI 459
Query: 422 DMYAKCGRLNDARKVF-DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
++Y KCG L AR VF D S +NLV+WN+ML G + +EI MM I P++
Sbjct: 460 NLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMPDE 519
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIK 540
TF+ VL AC H G +++G F S D+GI+ H VV + G+ A E +
Sbjct: 520 LTFLSVLFACSHGGSIQQGLDLFLSAGVDYGIATNTKHYVCVVDILGRVGRLEEAQEVLN 579
Query: 541 SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDE 600
P + N V W LL C+ H+D GR AA+ ++ DP++ + + +LS +++ A
Sbjct: 580 RMPFQANDVAWMTLLGACRIHRDFEQGRRAADYVIELDPQNAAPYALLSTMFSVAGRGRM 639
Query: 601 TAK 603
AK
Sbjct: 640 PAK 642
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 152/485 (31%), Positives = 244/485 (50%), Gaps = 12/485 (2%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
CAS D + K+ + R G + ++ N L+ YGKCG + A+ VFD RN SW
Sbjct: 22 CASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQRRNIFSW 81
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
+L +Y G L +F + G+AI + S L ACAV G+L+ G IH+
Sbjct: 82 TIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGIHASARS 141
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
E + VA L+++Y KC L+ A VF+ + + +W+A++ YAQ G EA+ L
Sbjct: 142 LGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCEEAVRL 201
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
+ M G+ P TF VL + E G ++H +++ GF S T +AN ++ Y
Sbjct: 202 YRLMCFEGIKPDATTFVSVLDGWKGEGEH--GTRIHDQVLESGFGSNTTLANALVSMYGS 259
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL------LKDMLFEGHCPNL 379
++++ FD + E VVSWNA++ + + YG+A++L ++ L E PN
Sbjct: 260 GGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVE---PNS 316
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
T+ N+L + +E G++ H + G S + +G AL++MY++CG L A+ VFD
Sbjct: 317 VTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYSECGNLVLAKSVFDS 376
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ KNLVSWN ++ YA G G+EAL ++ M+ +KP+ TFI VL AC + EG
Sbjct: 377 VPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFISVLHACSASEALAEG 436
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK 559
+++I G+ ++++L+ G +A N V W +L+
Sbjct: 437 -KAIHALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAAC 495
Query: 560 THKDL 564
T L
Sbjct: 496 TKGGL 500
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 199/389 (51%), Gaps = 7/389 (1%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
+ AI+ S AS+L CA +L Q + + D+++ L+ Y KC +
Sbjct: 5 RDATAIAISSHASILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVR 64
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A VF IQ ++ +W+ ++G YA G EA+ LF ++ S G+ VT L A A
Sbjct: 65 DAREVFDRIQRRNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACA 124
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ GR +H+ +G+ S VA ++ Y KC LEE+ F + E + VSWNA
Sbjct: 125 VAGDLEEGRGIHASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNA 184
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
++A + + H EA+ L + M FEG P+ T+ ++L+ E G + H +++ G
Sbjct: 185 MLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWKGEG--EHGTRIHDQVLESG 242
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
F SN + +ALV MY GR++DAR VFD ++ K +VSWN ML YAQ+G +A++++
Sbjct: 243 FGSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFW 302
Query: 470 MMQENK---IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
M E + ++PN TF+ +L AC G +E G ++ + G+ + ++++++
Sbjct: 303 KMDEMRRALVEPNSVTFVNLLVACAATGFLEAG-RKIHAEVASLGLLSTLSVGGALINMY 361
Query: 527 ACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+ G A S P N V W L+
Sbjct: 362 SECGNLVLAKSVFDSVP-HKNLVSWNVLI 389
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 182/358 (50%), Gaps = 6/358 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF N N L+ MY R++DA+ +FD + E+ V+SW+A+++ ++Q G A
Sbjct: 238 VLESGFGSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKA 297
Query: 61 LNYF---RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
++ F M ++EPN T+V + ACA+ G +G++IH + GL V L
Sbjct: 298 VDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLSVGGAL 357
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISE 177
INMY +CG L A+ VFD+ +N +SW L+ SY G+ L + G+ +
Sbjct: 358 INMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDK 417
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
F+ SVL AC+ L G IH+L+ LE D+ + LINLY KC L+ A VF +
Sbjct: 418 FTFISVLHACSASEALAEGKAIHALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLD 477
Query: 238 IQ-LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
++ +L W++++ G + +++ M G+MP E+TF VL A +
Sbjct: 478 MKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMPDELTFLSVLFACSHGGSIQQ 537
Query: 297 GRQLH-SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIA 352
G L S + G ++ T V+D + LEE+ + + M + + V+W L+
Sbjct: 538 GLDLFLSAGVDYGIATNTKHYVCVVDILGRVGRLEEAQEVLNRMPFQANDVAWMTLLG 595
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 157/341 (46%), Gaps = 35/341 (10%)
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN 348
A ++ +Q I + GF ++ N ++ Y KC + ++ + FD + ++ SW
Sbjct: 23 ASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQRRNIFSWT 82
Query: 349 ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP 408
++ + + H EA+ L +++ G + T + L + +E G+ H
Sbjct: 83 IMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGIHASARSL 142
Query: 409 GFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY 468
G++S +++ +ALV MY KCG L +A+ VF L +N VSWN ML YAQ+G EA+ +Y
Sbjct: 143 GYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCEEAVRLY 202
Query: 469 SMMQENKIKPNDNTFIGVLSAC---------VHIGLVEEGW----HYFNSMIRDHGISPR 515
+M IKP+ TF+ VL +H ++E G+ N+++ +G R
Sbjct: 203 RLMCFEGIKPDATTFVSVLDGWKGEGEHGTRIHDQVLESGFGSNTTLANALVSMYGSGGR 262
Query: 516 MDH-------IA--------SVVHLFACRGQTRRAYEF------IKSSPIEPNKVVWRCL 554
+D IA +++ +A G+ +A + ++ + +EPN V + L
Sbjct: 263 VDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNL 322
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDT-SAHIMLSNVYAE 594
L C L GR ++ S T S L N+Y+E
Sbjct: 323 LVACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYSE 363
>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
Length = 616
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 291/523 (55%), Gaps = 7/523 (1%)
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
G+ +GK+IH + ++G N +V N L+ MY KCG L A+ VFD R+SISW ++
Sbjct: 81 GELAAGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSISWSKMI 140
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN--LKVGMQIHSLVFKCA 207
+ Y + G +K++ + + F+ ++VL AC+ LG L+VG +IH+ + +
Sbjct: 141 AGYVRHGLAREAIKLY---KAMAIDPDGFTFSAVLNACSSLGPRALEVGKEIHAHMKRIW 197
Query: 208 LEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFV 267
L+ D FV L+ ++AKC L + VF + + D+ W+++I Y+Q G EAI+LF
Sbjct: 198 LKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFK 257
Query: 268 KMFSSG--LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
M SS + P+ +T++ VL A + V++ G+++H ++ GF N++++ Y+K
Sbjct: 258 SMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAENSLVNMYAK 317
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C + E+ + FD M + VVSW +I+ ++ H EA++L + M EG PN T++++
Sbjct: 318 CGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASV 377
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L+ S + A+E GK H + G+ ++ + +ALV +Y KCG ++ ARKVFD + +N+
Sbjct: 378 LSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNV 437
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
VSW M+ YA H EA+++Y M ++ + + VL+AC GL+E HYF
Sbjct: 438 VSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLESARHYFGC 497
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
+ RD G +++ + + G+ A E + P E V W LL+ CK H D+
Sbjct: 498 LTRDCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLAACKAHNDVE 557
Query: 566 LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
G AE + +P + + +++LSN+Y A +E A+VR+ M
Sbjct: 558 RGARVAEVLFRLEPLNEAPYVLLSNIYVAAGRQEEAARVRRKM 600
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 240/464 (51%), Gaps = 9/464 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G++ NV NHL+ MY K + DA+K+FD M R+ ISWS +I+G+ + G+ A
Sbjct: 93 VVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSISWSKMIAGYVRHGLAREA 152
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDA--RSGKEIHGRMYRSGLELNSHVSNCLI 118
+ ++ M ++P+ +T+ ++AC+S G GKEIH M R L+ + V + L+
Sbjct: 153 IKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEVGKEIHAHMKRIWLKPDVFVDSALV 209
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAIS 176
M+ KCG L ++ VFD ++ + W S++ +Y Q G +++F + S V +
Sbjct: 210 TMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPN 269
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+ +VL AC+ + +L+ G ++H + +FD L+N+YAKC + A VF
Sbjct: 270 AITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFD 329
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
++ + +W+ +I Y + G EA+DL+ KM S G+ P+ +TF+ VL A + +
Sbjct: 330 GMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSACSSLGALEE 389
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+ +H+ + G+ VAN ++ Y KC ++ + K FD M +VVSW A+I+ +
Sbjct: 390 GKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISAYAH 449
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVV 415
H EAI+L K M EG + + Y +L S +E + C+ + G + +
Sbjct: 450 HRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLESARHYFGCLTRDCGAPAKLE 509
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
+ + + GRL +A ++ + V+W +L H
Sbjct: 510 DYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLAACKAH 553
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 195/400 (48%), Gaps = 52/400 (13%)
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
D E G+++H ++K G+ +V N ++ YSKC LE++ K FD M D +SW+
Sbjct: 79 DCGELAAGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSISWSK 138
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI--PAIEWGKQTHCCIVK 407
+IAG++ EAI+L K M + P+ +T+S +LN S + A+E GK+ H + +
Sbjct: 139 MIAGYVRHGLAREAIKLYKAMAID---PDGFTFSAVLNACSSLGPRALEVGKEIHAHMKR 195
Query: 408 PGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEI 467
+V + SALV M+AKCG L ++R+VFD K+++ WN+M+V Y+Q G REA+E+
Sbjct: 196 IWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIEL 255
Query: 468 YSMMQENK--IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
+ M + ++PN T+ VL+AC + +E+G M+ D G S+V++
Sbjct: 256 FKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMV-DAGFQFDAAAENSLVNM 314
Query: 526 FA-C------------------------------RGQTRRA---YEFIKSSPIEPNKVVW 551
+A C +G R A Y + S +EPN + +
Sbjct: 315 YAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITF 374
Query: 552 RCLLSGCKTHKDLVLGR--YAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK 609
+LS C + L G+ +A K P+ A+ ++S +Y + D KV MK
Sbjct: 375 ASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVS-LYGKCGSVDSARKVFDRMK 433
Query: 610 EKSLKKDTGCSWTELQNKM--HYFSTSRFAQFQGIDLHEV 647
+++ SWT + + H S ++ +DL V
Sbjct: 434 IRNV-----VSWTAMISAYAHHRHSEEAIQLYKAMDLEGV 468
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 136/281 (48%), Gaps = 51/281 (18%)
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
Y N+L ++ A GK+ H +VK G+ NV +G+ LV MY+KCG L DA+KVFD +
Sbjct: 72 AYGNLLRDCGELAA---GKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGM 128
Query: 441 SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG--LVEE 498
++ +SW+ M+ GY +HGL REA+++Y M I P+ TF VL+AC +G +E
Sbjct: 129 RRRDSISWSKMIAGYVRHGLAREAIKLYKAMA---IDPDGFTFSAVLNACSSLGPRALEV 185
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFA--------------CR--------------- 529
G M R + P + +++V +FA CR
Sbjct: 186 GKEIHAHMKRIW-LKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYS 244
Query: 530 --GQTRRAYEFIK-----SSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPE-D 581
G R A E K S P+EPN + + +L+ C +DL G+ +++ + D
Sbjct: 245 QSGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFD 304
Query: 582 TSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWT 622
+A L N+YA+ E +V MK++++ SWT
Sbjct: 305 AAAENSLVNMYAKCGSITEAREVFDGMKQRTV-----VSWT 340
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 284/509 (55%)
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A+ +FD +R+ W +L+ Y G L ++ +G+ ++ V+ +CAV
Sbjct: 81 ARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAV 140
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
L L+ G ++H + K + D FV L+ +Y++ + VF + + ++ +W+A+
Sbjct: 141 LSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAV 200
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I GY Q E + +F +M SG P+ VT VL A A ++ G+ +H IK+G
Sbjct: 201 IAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGV 260
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
+ N ++ Y KC +E + FD M ++VSWNA+IA + + A++L +
Sbjct: 261 DPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRR 320
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M E + T ++++ + + A+ G+ H + + G + NV I +AL+DMYAKCG
Sbjct: 321 MQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGN 380
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
++ AR+VF+ L +++VSW +M+ A HG G +AL+++S M++ +KPN TF V +A
Sbjct: 381 IDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTA 440
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C H GLVEEG +F SM+RD+ I P ++H A +V L G AYEFI P+EP+
Sbjct: 441 CRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVS 500
Query: 550 VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK 609
VW LL C+ H +L L AEK+ DP+ + ++++SN+YAEA W++ A++RK+M+
Sbjct: 501 VWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLME 560
Query: 610 EKSLKKDTGCSWTELQNKMHYFSTSRFAQ 638
E+ LKK G S E+ + H F + +Q
Sbjct: 561 ERELKKIPGHSLVEVNRRFHTFLSGSRSQ 589
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 226/458 (49%), Gaps = 9/458 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRIND-AQKLFDEMPERNVISWSALISGFSQIGMPEV 59
++T+G N++ L++ + D A+K+FD+MP+R+V W+ LI G++ G E
Sbjct: 52 VVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEE 111
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
AL + M L P+ YT+ V +CA R GKE+H + + G + + V + L+
Sbjct: 112 ALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVA 171
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY + G + VF + RN +SW ++++ Y Q GL +F SG + +
Sbjct: 172 MYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVT 231
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL ACA L L +G IH K ++ D + LI LY KC ++ A +F +
Sbjct: 232 LVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMV 291
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +L +W+A+I Y Q A+ LF +M + + +T V+ A A + GR
Sbjct: 292 VQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRW 351
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H L+ + G + N ++D Y+KC ++ + + F+ + VVSW ++I + H
Sbjct: 352 MHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGH 411
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG-- 417
+A++L M EG PN +T++ + +E G++ +++ D +++ G
Sbjct: 412 GEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMR---DYSIMPGVE 468
Query: 418 --SALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTML 452
+ +VD+ + G L +A + D + + VS W +L
Sbjct: 469 HCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALL 506
>gi|302806575|ref|XP_002985037.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
gi|300147247|gb|EFJ13912.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
Length = 763
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 191/599 (31%), Positives = 308/599 (51%), Gaps = 10/599 (1%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
TSG N L+ MY K + DA+K+FD R+ ++W+A++ G+++ G E AL+
Sbjct: 162 TSGCDSVPFVANTLIDMYSKCGSLLDAKKVFDSTQARDAVAWTAMMLGYAENGEAERALH 221
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F M N Y + C S G IH R+ + ++ + N L+ MY
Sbjct: 222 LFACMEQQGCMYNREAYTSLLRECISGRALERGARIHARLIAIEKDKDTAIGNLLVQMYA 281
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA--ISEFSC 180
KCG L A+ F + RNS+SW +L++Y G+ GL +F G + F+
Sbjct: 282 KCGDLHRARKAFYSIERRNSVSWTVMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTL 341
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+ VL AC+ LG G IH+ + C E D + L+ +YAKC L+ A RVF NIQ
Sbjct: 342 SCVLSACSSLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQD 401
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET----IG 296
+W+++I Y Q + E++ +F+ M G+ P E+T S + A +++
Sbjct: 402 KSRVSWTSIISAYVQHERGDESLKMFLAMNLDGMQPDEMTLSALCAACCQLEDRGRGLAV 461
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
GR +H+ I G V ++ Y++C L E+ F+++ DVVSWNA++ +
Sbjct: 462 GRGVHTRIRVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLTPKDVVSWNAMLTATVE 521
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ EA+ L + M EG P+ T++ ++ S + + H + G D + V
Sbjct: 522 AGEAEEALRLHQRMRAEGVMPDAATFAVVVAACSALKDEATSRAVHTEVAARGLDGHPVS 581
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVS---WNTMLVGYAQHGLGREALEIYSMMQE 473
G+ALV MYAKCGRL+DA VF+ + ++++ WN++L A+HG G A+E + +M
Sbjct: 582 GTALVCMYAKCGRLDDATTVFERMQRHSVLAVAAWNSILAALAKHGHGATAVEFFRVMTM 641
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
++P+ T +L AC H GL+ G YF SM+ D G++P +H A ++ L G
Sbjct: 642 AYVQPDGITITVMLHACSHSGLLATGLDYFLSMLHDFGLAPAAEHYACLIDLLGRAGVGA 701
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP-EDTSAHIMLSNV 591
A E I+ P P+ V W+ LL+ C+T KD G AA +++ DP S++++LSN+
Sbjct: 702 EAEEVIRGMPFAPDNVAWKTLLASCQTSKDAGRGSRAAMQLIRMDPLLHDSSYVLLSNI 760
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/476 (30%), Positives = 245/476 (51%), Gaps = 13/476 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N L+ MY K + +A+ F+++ R+ +SW+ LI +++ G AL F M
Sbjct: 71 NSLVNMYAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMADEGCL 130
Query: 74 PNYYTYVGAVSACAS--RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
P+ TY+ A+ ACAS R R G ++H + SG + V+N LI+MY KCG L A+
Sbjct: 131 PDGRTYLAALVACASLLRCLER-GMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAK 189
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLG 191
VFD++ R++++W +++ Y + GE L +F + G + + S+L C
Sbjct: 190 KVFDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLRECISGR 249
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
L+ G +IH+ + A+E DK A+G L+ +YAKC L A + F +I+ + +W+ +
Sbjct: 250 ALERGARIHARLI--AIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWTVM 307
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMP--SEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+ Y GK + + LF M G T S VL A + + G+ +H+ ++
Sbjct: 308 LAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLVAC 367
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
G+ + N ++ Y+KC LEE+ + FD + + VSW ++I+ ++ E++++
Sbjct: 368 GYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIISAYVQHERGDESLKMF 427
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIP----AIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
M +G P+ T S + + + G+ H I G D N V+G+ALV M
Sbjct: 428 LAMNLDGMQPDEMTLSALCAACCQLEDRGRGLAVGRGVHTRIRVAGHDQNPVVGTALVCM 487
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
YA+CG L +A VF+ L+ K++VSWN ML + G EAL ++ M+ + P+
Sbjct: 488 YARCGCLLEAAAVFNKLTPKDVVSWNAMLTATVEAGEAEEALRLHQRMRAEGVMPD 543
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/427 (30%), Positives = 222/427 (51%), Gaps = 20/427 (4%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLEL--NSHVSNCLINMYGKCGLLSSAQFVFD 135
T + S C S +AR+ + RM R + +S+ N L+NMY KCG L A+ F+
Sbjct: 35 TVIDVFSRCGSLVNARN---VFDRMVRRDVVSWNDSYALNSLVNMYAKCGSLVEARAEFE 91
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA-VLGNLK 194
R+++SW +L+ +Y + G L++F G + + L ACA +L L+
Sbjct: 92 KLQRRDAVSWTTLILAYTENGRGGEALELFSRMADEGCLPDGRTYLAALVACASLLRCLE 151
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
GM +HS + FVA LI++Y+KC L A +VF + Q D AW+A++ GYA
Sbjct: 152 RGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAKKVFDSTQARDAVAWTAMMLGYA 211
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL------HSLIIKMG 308
+ G+A A+ LF M G M + ++ +L +E I GR L H+ +I +
Sbjct: 212 ENGEAERALHLFACMEQQGCMYNREAYTSLL------RECISGRALERGARIHARLIAIE 265
Query: 309 FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLK 368
T + N ++ Y+KC L + K F ++ + VSW ++A ++ + + L
Sbjct: 266 KDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWTVMLAAYIDHGKQEQGLCLFH 325
Query: 369 DMLFEGHCPNL--YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M EG ++ +T S +L+ S + A G+ H +V G++ ++ + +ALV MYAK
Sbjct: 326 TMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAK 385
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
C L +AR+VFD++ K+ VSW +++ Y QH G E+L+++ M + ++P++ T +
Sbjct: 386 CHCLEEARRVFDNIQDKSRVSWTSIISAYVQHERGDESLKMFLAMNLDGMQPDEMTLSAL 445
Query: 487 LSACVHI 493
+AC +
Sbjct: 446 CAACCQL 452
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 183/381 (48%), Gaps = 13/381 (3%)
Query: 211 DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF 270
D + L+N+YAKC L A F +Q D +W+ LI Y + G+ EA++LF +M
Sbjct: 66 DSYALNSLVNMYAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMA 125
Query: 271 SSGLMPSEVTFSYVLGAFADVKETI-GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
G +P T+ L A A + + G +HS G S FVANT++D YSKC L
Sbjct: 126 DEGCLPDGRTYLAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSL 185
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
++ K FD D V+W A++ G+ + A+ L M +G N Y+++L
Sbjct: 186 LDAKKVFDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLREC 245
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWN 449
A+E G + H ++ D + IG+ LV MYAKCG L+ ARK F + +N VSW
Sbjct: 246 ISGRALERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWT 305
Query: 450 TMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI--GVLSACVHIGLVEEGWHYFNSMI 507
ML Y HG + L ++ M + + + F VLSAC +G EG ++ +
Sbjct: 306 VMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEG-QAIHARL 364
Query: 508 RDHGISPRMDHIASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK-- 562
G + ++V ++A C + RR ++ I+ + ++V W ++S H+
Sbjct: 365 VACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQ----DKSRVSWTSIISAYVQHERG 420
Query: 563 DLVLGRYAAEKILSTDPEDTS 583
D L + A + P++ +
Sbjct: 421 DESLKMFLAMNLDGMQPDEMT 441
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 134/302 (44%), Gaps = 44/302 (14%)
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWN----------- 348
LH+ +++G S TFVANTV+D +S+C L + FD M DVVSWN
Sbjct: 17 LHAGAVEIGAESDTFVANTVIDVFSRCGSLVNARNVFDRMVRRDVVSWNDSYALNSLVNM 76
Query: 349 --------------------------ALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
LI + + GEA+EL M EG P+ TY
Sbjct: 77 YAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMADEGCLPDGRTY 136
Query: 383 -SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
+ ++ +S + +E G H G DS + + L+DMY+KCG L DA+KVFD
Sbjct: 137 LAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAKKVFDSTQ 196
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
+++ V+W M++GYA++G AL +++ M++ N + +L C+ +E G
Sbjct: 197 ARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLRECISGRALERGAR 256
Query: 502 YFNSMIRDHGISPRMDHIAS--VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK 559
+I I D +V ++A G RA + S N V W +L+
Sbjct: 257 IHARLI---AIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIE-RRNSVSWTVMLAAYI 312
Query: 560 TH 561
H
Sbjct: 313 DH 314
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 148/294 (50%), Gaps = 7/294 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ ++ N L+ MY K + +A+++FD + +++ +SW+++IS + Q + +
Sbjct: 364 LVACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIISAYVQHERGDES 423
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACAS---RGDARS-GKEIHGRMYRSGLELNSHVSNC 116
L F M ++P+ T +AC RG + G+ +H R+ +G + N V
Sbjct: 424 LKMFLAMNLDGMQPDEMTLSALCAACCQLEDRGRGLAVGRGVHTRIRVAGHDQNPVVGTA 483
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
L+ MY +CG L A VF+ ++ +SW ++L++ + GE L++ R GV
Sbjct: 484 LVCMYARCGCLLEAAAVFNKLTPKDVVSWNAMLTATVEAGEAEEALRLHQRMRAEGVMPD 543
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+ A V+ AC+ L + +H+ V L+ L+ +YAKC +LD A+ VF
Sbjct: 544 AATFAVVVAACSALKDEATSRAVHTEVAARGLDGHPVSGTALVCMYAKCGRLDDATTVFE 603
Query: 237 NIQ---LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+Q + + AW++++ A+ G A++ F M + + P +T + +L A
Sbjct: 604 RMQRHSVLAVAAWNSILAALAKHGHGATAVEFFRVMTMAYVQPDGITITVMLHA 657
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/618 (29%), Positives = 331/618 (53%), Gaps = 41/618 (6%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERN- 141
+ C + D R+GK +H +S + ++++SN + +Y KC LS+A+ VFD + + N
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74
Query: 142 ------------------------------SISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
S+S+ +L+++Y + G+ ++FL R++
Sbjct: 75 FSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA 134
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLD 229
+ + F+ + ++ AC + N+ + Q+H+L L D +V++G LI Y+K L
Sbjct: 135 FLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGL--DSYVSVGNALITSYSKNGFLK 190
Query: 230 LASRVFSNI-QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAF 288
A R+F + + D +W++++ Y Q + +A++L+++M GL+ T + VL AF
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250
Query: 289 ADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE-LLEESLKTFDEMDEHDVVSW 347
+V++ +GG Q H+ +IK G+ + V + ++D YSKC + + K FDE+ D+V W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310
Query: 348 NALIAGH-LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
N +I+G+ L EA+E + + GH P+ + +++ S++ + G+Q H +
Sbjct: 311 NTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLAL 370
Query: 407 KPGFDSN-VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREAL 465
K SN + + +AL+ MY+KCG L DA+ +FD + N VS+N+M+ GYAQHG+G ++L
Sbjct: 371 KLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSL 430
Query: 466 EIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHL 525
++ M E P + TFI VL+AC H G VE+G YFN M + GI P H + ++ L
Sbjct: 431 HLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDL 490
Query: 526 FACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
G+ A I++ P +P W LL C+ H ++ L AA ++L DP + + +
Sbjct: 491 LGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPY 550
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLH 645
+ML+N+Y++ + A VRK+M+++ +KK GCSW E+ ++H F +
Sbjct: 551 VMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQ 610
Query: 646 EVMNQLSVHLFDGGYVPD 663
E + ++ + GY P+
Sbjct: 611 EYLEEMMRKIKKVGYTPE 628
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 233/458 (50%), Gaps = 10/458 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
NV ++N L+ Y K S + A +LFDEMP+ + +S++ LI+ +++ G + A F M
Sbjct: 73 NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
L+ + +T G ++AC + +++H +GL+ V N LI Y K G L
Sbjct: 133 EAFLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190
Query: 129 SAQFVFD-ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A+ +F S +R+ +SW S++ +Y Q E L+++L G+ + F+ ASVL A
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASR-VFSNIQLPDLTAW 246
+ +L G+Q H+ + K + V GLI+LY+KC L R VF I PDL W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310
Query: 247 SALIGGYAQLGK-ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
+ +I GY+ + EA++ F ++ G P + + V+ A +++ GRQ+H L +
Sbjct: 311 NTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLAL 370
Query: 306 KMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
K+ S V N ++ YSKC L ++ FD M EH+ VS+N++IAG+ +++
Sbjct: 371 KLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSL 430
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--SALVD 422
L + ML P T+ ++L + +E GK + ++K F G S ++D
Sbjct: 431 HLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHFSCMID 489
Query: 423 MYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+ + G+L++A ++ + + W+ +L HG
Sbjct: 490 LLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHG 527
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/609 (32%), Positives = 312/609 (51%), Gaps = 74/609 (12%)
Query: 92 ARSGKEIHGRMYRSGLELN------SHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
AR+ I + +S +ELN S + N L+++Y K G LS AQ VFD +R+ SW
Sbjct: 33 ARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSW 92
Query: 146 VSLLSSYCQCG--EHVH-----------------------------GLKIFLLSRKSGVA 174
+LLS+Y + G E++H LK+ + ++ G
Sbjct: 93 NTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQ 152
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+++S + L AC+ L +L+ G QIH + L + FV + ++YAKC +D A +
Sbjct: 153 PTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLL 212
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F + ++ +W+ +I GY ++G E I LF +M SGL P VT S VL A
Sbjct: 213 FDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA------- 265
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
Y +C ++++ F ++ + D + W +I G+
Sbjct: 266 ----------------------------YFRCGRVDDARNLFIKLPKKDEICWTTMIVGY 297
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
+ +A L DML P+ YT S++++ + + ++ G+ H +V G D+++
Sbjct: 298 AQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSM 357
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
++ SALVDMY KCG DAR +F+ + +N+++WN M++GYAQ+G EAL +Y MQ+
Sbjct: 358 LVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQE 417
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
KP++ TF+GVLSAC++ +V+EG YF+S I +HGI+P +DH A ++ L G +
Sbjct: 418 NFKPDNITFVGVLSACINADMVKEGQKYFDS-ISEHGIAPTLDHYACMITLLGRSGSVDK 476
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
A + I+ P EPN +W LLS C DL AA + DP + +IMLSN+YA
Sbjct: 477 AVDLIQGMPHEPNYRIWSTLLSVC-AKGDLKNAELAASHLFELDPRNAGPYIMLSNLYAA 535
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
W + A VR +MKEK+ KK SW E+ NK+H F + + ++ +N+L
Sbjct: 536 CGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISI 595
Query: 655 LFDGGYVPD 663
L GY PD
Sbjct: 596 LQQIGYNPD 604
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 223/480 (46%), Gaps = 68/480 (14%)
Query: 6 FHP-NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV----- 59
F P + +N LL +Y KF +++DAQ +FD M +R+V SW+ L+S ++++GM E
Sbjct: 53 FQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVF 112
Query: 60 -------ALNYFRLMVCCV-------------------LEPNYYTYVGAVSACASRGDAR 93
+++Y L+ C +P Y++V A+ AC+ D R
Sbjct: 113 DQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLR 172
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
GK+IHGR+ + L N+ V N + +MY KCG + A+ +FD +++N +SW ++S Y
Sbjct: 173 HGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYV 232
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
+ G + +F + SG L+ D
Sbjct: 233 KMGNPNECIHLFNEMQLSG-----------------------------------LKPDLV 257
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
++N Y +C ++D A +F + D W+ +I GYAQ G+ +A LF M
Sbjct: 258 TVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRN 317
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ P T S ++ + A + G+ +H ++ MG + V++ ++D Y KC + ++
Sbjct: 318 VKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDAR 377
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
F+ M +V++WNA+I G+ + EA+ L + M E P+ T+ +L+ +
Sbjct: 378 VIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINAD 437
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTML 452
++ G++ I + G + + ++ + + G ++ A + + + N W+T+L
Sbjct: 438 MVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLL 497
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 195/467 (41%), Gaps = 86/467 (18%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ + N N + MY K I+ A+ LFD M ++NV+SW+ +ISG+ ++G P
Sbjct: 181 IVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNEC 240
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ F M L+P+ T VSN L N
Sbjct: 241 IHLFNEMQLSGLKPDLVT----------------------------------VSNVL-NA 265
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG + A+ +F +++ I W +++ Y Q G +F + V ++
Sbjct: 266 YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTI 325
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S++ +CA L +L G +H V ++ V+ L+++Y KC A +F + +
Sbjct: 326 SSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPI 385
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+A+I GYAQ G+ EA+ L+ +M P +TF VL A +
Sbjct: 386 RNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACIN---------- 435
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS----WNALIAGHLA 356
++++E K FD + EH + + +I
Sbjct: 436 -------------------------ADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGR 470
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNI--SSDIPAIEWGKQTHCCIVKPGFDSNV 414
S +A++L++ M H PN +S +L++ D+ E +H + P
Sbjct: 471 SGSVDKAVDLIQGM---PHEPNYRIWSTLLSVCAKGDLKNAELAA-SHLFELDPRNAGPY 526
Query: 415 VIGSALVDMYAKCGRLND---ARKVFDHLSSKNLVSWNTMLVGYAQH 458
++ L ++YA CGR D R + ++K +++ + VG H
Sbjct: 527 IM---LSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVH 570
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 266/451 (58%), Gaps = 5/451 (1%)
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
F+ LIN+Y K L+ A ++F + ++ +W+ +I Y++ +A++L V M
Sbjct: 49 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 108
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G+ P+ T+S VL A + + R LH IIK G S +V + ++D ++K E++
Sbjct: 109 GVRPNVYTYSSVLRACNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDA 165
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
L FDEM D + WN++I G + A+EL K M G T +++L + +
Sbjct: 166 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 225
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
+E G Q H IVK +D ++++ +ALVDMY KCG L DAR+VF+ + +++++W+TM+
Sbjct: 226 ALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMI 283
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
G AQ+G +EAL+++ +M+ + KPN T +GVL AC H GL+E+GW+YF SM + +GI
Sbjct: 284 SGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 343
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAE 572
+P +H ++ L G+ A + + EP+ V WR LL C+ +++VL YAA+
Sbjct: 344 NPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAK 403
Query: 573 KILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
K+++ DPED + +LSN+YA + WD ++RK M++ +KK+ GCSW E+ ++H F
Sbjct: 404 KVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFI 463
Query: 633 TSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+ Q +++++ +NQL L GYVP+
Sbjct: 464 IGDESHPQIVEVNKKLNQLIHRLIGIGYVPE 494
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 188/353 (53%), Gaps = 9/353 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G P + N L+ MYVKF+ +NDA +LFD+MP+RNVISW+ +IS +S+ + + AL
Sbjct: 42 NGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALEL 101
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
LM+ + PN YTY + AC D R +H + + GLE + +V + LI+++ K
Sbjct: 102 LVLMLRDGVRPNVYTYSSVLRACNGMSDVRM---LHCGIIKEGLESDVYVRSALIDVFAK 158
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
G A VFD + ++I W S++ + Q L++F +++G + + SV
Sbjct: 159 LGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSV 218
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L AC L L++GMQ H + K + D + L+++Y KC L+ A RVF+ ++ D+
Sbjct: 219 LRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDV 276
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA--FADVKETIGGRQLH 301
WS +I G AQ G + EA+ LF M SSG P+ +T VL A A + E G
Sbjct: 277 ITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLED-GWYYFR 335
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
S+ G + ++D K L++++K +EM+ E D V+W L+
Sbjct: 336 SMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 388
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 197/381 (51%), Gaps = 15/381 (3%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TY + C S G I +Y +G + + N LINMY K LL+ A +FD
Sbjct: 15 TYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQM 74
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
+RN ISW +++S+Y +C H L++ +L + GV + ++ +SVL AC + ++++
Sbjct: 75 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDVRM-- 132
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
+H + K LE D +V LI+++AK + + A VF + D W+++IGG+AQ
Sbjct: 133 -LHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNS 191
Query: 258 KACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVAN 317
++ A++LF +M +G + + T + VL A + G Q H I+K + + N
Sbjct: 192 RSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNN 249
Query: 318 TVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP 377
++D Y KC LE++ + F++M E DV++W+ +I+G + + EA++L + M G P
Sbjct: 250 ALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKP 309
Query: 378 NLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
N T +L S +E G + PG + ++D+ K G+L+D
Sbjct: 310 NYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHY----GCMIDLLGKAGKLDD 365
Query: 433 ARKVFDHLSSK-NLVSWNTML 452
A K+ + + + + V+W T+L
Sbjct: 366 AVKLLNEMECEPDAVTWRTLL 386
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 4/254 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G +V + L+ ++ K DA +FDEM + I W+++I GF+Q +VA
Sbjct: 137 IIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVA 196
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ M T + AC G + H + + +L ++N L++M
Sbjct: 197 LELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLI--LNNALVDM 254
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L A+ VF+ ER+ I+W +++S Q G LK+F L + SG + +
Sbjct: 255 YCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITI 314
Query: 181 ASVLGACAVLGNLKVG-MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
VL AC+ G L+ G S+ + + +I+L K KLD A ++ + ++
Sbjct: 315 VGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEME 374
Query: 240 L-PDLTAWSALIGG 252
PD W L+G
Sbjct: 375 CEPDAVTWRTLLGA 388
>gi|302808794|ref|XP_002986091.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
gi|300146239|gb|EFJ12910.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
Length = 604
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 279/481 (58%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+L AC NL G ++H+ + + F+A ++ +Y KC ++ SR FS ++ +
Sbjct: 39 LLLACGRSKNLGNGRRLHARIVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSGMKRRN 98
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ +W+A+I YAQ ++ +AI +F++M G+ PS VTF+ VL AFA + + +H
Sbjct: 99 IVSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAFAGPELHRWAKLVHD 158
Query: 303 LIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE 362
L +++GF S VA +L+ YSK ++ + + FDE+ DVVSW+ +IA + + H E
Sbjct: 159 LALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIAAYAQTGHGTE 218
Query: 363 AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
A+E+ M EG N+ T+ +++ + I + HC I++ G +SN V+G+AL++
Sbjct: 219 ALEMFHRMDAEGIQANVITFVTVVHACVLVARITDARTIHCRIIEAGLESNTVLGTALLN 278
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MY KCG L +A+K+FD L+ +++V W+ +L YA+HG R AL+++++MQ+ ++PND T
Sbjct: 279 MYGKCGGLAEAKKIFDKLAERDVVVWSAILEAYARHGHPRVALKLFTLMQQEGVRPNDVT 338
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F+GVL AC H G V EG +F S++RDH + P H+ ++ + G+ A FI
Sbjct: 339 FVGVLEACCHGGFVPEGRFHFASLVRDHELRPTAHHVHCMLDMLGRAGKLEEAESFIARM 398
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
P++ + W L C+++ DL G+ AAEK+ P + ++ L+++Y +A M +E
Sbjct: 399 PVKEEAITWSIFLGSCRSYGDLERGKRAAEKVFEFLPHCRAGYLTLASMYTDAGMPEEAE 458
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
V ++M+ + KK+ G S ++ ++H F Q +++ +++L + GYVP
Sbjct: 459 AVARLMESRCPKKEPGSSKIVVRGRVHEFCVRSQWHPQAKEIYSYLDELHARALELGYVP 518
Query: 663 D 663
D
Sbjct: 519 D 519
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 177/376 (47%), Gaps = 2/376 (0%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y+ + AC + +G+ +H R+ +G + ++N ++ MYGKCG + F
Sbjct: 36 YLDLLLACGRSKNLGNGRRLHARIVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSGMK 95
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
RN +SW +++S+Y Q + IFL G+ S + SVL A A +
Sbjct: 96 RRNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAFAGPELHRWAKL 155
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+H L + VA L+N+Y+K +D A +VF + + D+ +WS +I YAQ G
Sbjct: 156 VHDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIAAYAQTGH 215
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
EA+++F +M + G+ + +TF V+ A V R +H II+ G S T +
Sbjct: 216 GTEALEMFHRMDAEGIQANVITFVTVVHACVLVARITDARTIHCRIIEAGLESNTVLGTA 275
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+L+ Y KC L E+ K FD++ E DVV W+A++ + H A++L M EG PN
Sbjct: 276 LLNMYGKCGGLAEAKKIFDKLAERDVVVWSAILEAYARHGHPRVALKLFTLMQQEGVRPN 335
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLNDARKVF 437
T+ +L + G+ +V+ ++DM + G+L +A
Sbjct: 336 DVTFVGVLEACCHGGFVPEGRFHFASLVRDHELRPTAHHVHCMLDMLGRAGKLEEAESFI 395
Query: 438 DHLSSK-NLVSWNTML 452
+ K ++W+ L
Sbjct: 396 ARMPVKEEAITWSIFL 411
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 196/428 (45%), Gaps = 15/428 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + NH+L+MY K + D + F M RN++SW+A+IS ++Q A
Sbjct: 59 IVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSGMKRRNIVSWNAVISAYAQNDRSSDA 118
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M+ ++P+Y T+ ++A A R K +H G + V+ L+NM
Sbjct: 119 IVIFLRMLLDGIQPSYVTFTSVLNAFAGPELHRWAKLVHDLALEVGFGSHPVVATALLNM 178
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+ VFD ++ +SW +++++Y Q G L++F G+ + +
Sbjct: 179 YSKVGSIDRARQVFDELAIKDVVSWSNMIAAYAQTGHGTEALEMFHRMDAEGIQANVITF 238
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+V+ AC ++ + IH + + LE + + L+N+Y KC L A ++F +
Sbjct: 239 VTVVHACVLVARITDARTIHCRIIEAGLESNTVLGTALLNMYGKCGGLAEAKKIFDKLAE 298
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR-Q 299
D+ WSA++ YA+ G A+ LF M G+ P++VTF VL A GR
Sbjct: 299 RDVVVWSAILEAYARHGHPRVALKLFTLMQQEGVRPNDVTFVGVLEACCHGGFVPEGRFH 358
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASC 358
SL+ + +LD + LEE+ M + + ++W+ L SC
Sbjct: 359 FASLVRDHELRPTAHHVHCMLDMLGRAGKLEEAESFIARMPVKEEAITWSIF----LGSC 414
Query: 359 H-YG--EAIELLKDMLFE--GHCPNLYTYSNILNISSDIP----AIEWGKQTHCCIVKPG 409
YG E + + +FE HC Y + + +P A+ ++ C +PG
Sbjct: 415 RSYGDLERGKRAAEKVFEFLPHCRAGYLTLASMYTDAGMPEEAEAVARLMESRCPKKEPG 474
Query: 410 FDSNVVIG 417
VV G
Sbjct: 475 SSKIVVRG 482
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/489 (32%), Positives = 282/489 (57%), Gaps = 3/489 (0%)
Query: 178 FSC-ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
F C ++L AC L+ G ++H+ + K ++ L+ Y KC+ L+ A +V
Sbjct: 51 FHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLD 110
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ ++ +W+A+I Y+Q G + EA+ +F +M S P+E TF+ VL +
Sbjct: 111 EMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLAL 170
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+Q+H LI+K + S FV +++LD Y+K +EE+ + F+ + E DVVS A+IAG+
Sbjct: 171 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQ 230
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
EA+E+ + + EG PN TY+++L S + ++ GKQ HC +++ V+
Sbjct: 231 LGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 290
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ-ENK 475
++L+DMY+KCG L+ A+++FD++ + +SWN MLVGY++HGLGRE LE++ +M+ E +
Sbjct: 291 QNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 350
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR-DHGISPRMDHIASVVHLFACRGQTRR 534
+KP+ T + VLS C H + + G ++ M+ ++GI P +H +V + G+
Sbjct: 351 VKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDE 410
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAE 594
A+EFIK P +P V LL C+ H + +G Y +++ +PE+ +++LSN+YA
Sbjct: 411 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYAS 470
Query: 595 ANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVH 654
A W++ VR +M +K++ K+ G SW + + +HYF + + ++ M ++S+
Sbjct: 471 AGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIK 530
Query: 655 LFDGGYVPD 663
+ GYVPD
Sbjct: 531 MKQAGYVPD 539
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 193/380 (50%), Gaps = 3/380 (0%)
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
MV E ++ Y ++AC + R G+ +H M ++ +++ L+ YGKC
Sbjct: 42 MVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC 101
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A+ V D E+N +SW +++S Y Q G L +F +S +EF+ A+VL +
Sbjct: 102 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTS 161
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
C L +G QIH L+ K + FV L+++YAK +++ A +F + D+ +
Sbjct: 162 CIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSC 221
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+A+I GYAQLG EA+++F ++ S G+ P+ VT++ +L A + + G+Q H +++
Sbjct: 222 TAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLR 281
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
+ + N+++D YSKC L + + FD M E +SWNA++ G+ E +EL
Sbjct: 282 RELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLEL 341
Query: 367 LKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIV--KPGFDSNVVIGSALVDM 423
+ M E P+ T +L+ S + G + +V + G + +VDM
Sbjct: 342 FRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDM 401
Query: 424 YAKCGRLNDARKVFDHLSSK 443
+ GR+++A + + SK
Sbjct: 402 LGRAGRIDEAFEFIKRMPSK 421
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 175/344 (50%), Gaps = 7/344 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + + P LL+ Y K + DA+K+ DEMPE+NV+SW+A+IS +SQ G A
Sbjct: 77 MIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEA 136
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ +PN +T+ +++C GK+IHG + + + + V + L++M
Sbjct: 137 LSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDM 196
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A+ +F+ ER+ +S ++++ Y Q G L++F + G+ + +
Sbjct: 197 YAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTY 256
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+L A + L L G Q H V + L F + LI++Y+KC L A R+F N +
Sbjct: 257 ASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDN--M 314
Query: 241 PDLTA--WSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFADVKETIGG 297
P+ TA W+A++ GY++ G E ++LF M + P VT VL + K G
Sbjct: 315 PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTG 374
Query: 298 RQLHSLII--KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
++ ++ + G T ++D + ++E+ + M
Sbjct: 375 LSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRM 418
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 7/189 (3%)
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
C G E L +M+ G + Y +LN D A+ G++ H ++K + +
Sbjct: 30 CSNGRLQEALLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLR 89
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ L+ Y KC L DARKV D + KN+VSW M+ Y+Q G EAL +++ M + K
Sbjct: 90 TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGK 149
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI---ASVVHLFACRGQTRR 534
PN+ TF VL++C+ + G +++ + S HI +S++ ++A GQ
Sbjct: 150 PNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDS----HIFVGSSLLDMYAKAGQIEE 205
Query: 535 AYEFIKSSP 543
A E + P
Sbjct: 206 AREIFECLP 214
>gi|224058449|ref|XP_002299515.1| predicted protein [Populus trichocarpa]
gi|222846773|gb|EEE84320.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 301/540 (55%), Gaps = 3/540 (0%)
Query: 112 HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
H SN +++MY +CG A VFD E + +SW + + E V +I L
Sbjct: 10 HFSNAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERIGTASDGHEAVELFRIVL---SL 66
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G+ ++E++ +VL + L G QI +L K V+ L+++Y KC ++ A
Sbjct: 67 GLDVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQICDA 126
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
RVF N+ + D +W++LI ++ G +A+++F +M L P+ T + +L A ++
Sbjct: 127 CRVFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAVSNS 186
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALI 351
T Q+HSL++K GF + + ++ Y +C ++ES + F E+D+ ++V N +I
Sbjct: 187 NNTKQVIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMI 246
Query: 352 AGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
+ + +Y +A+ L + + + T+S IL S I ++ G+ H ++K GFD
Sbjct: 247 TTFVRAGYYTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFD 306
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
+ + S+++D+Y KCG + A K F S +L +WN M++GYA HG +E ++++ M
Sbjct: 307 QDSFVESSVIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKM 366
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
+ I+P++ T++GVLS+C H GLV+E HY +SM HGI P ++H A ++ L G
Sbjct: 367 SQFGIEPDEITYLGVLSSCCHGGLVKEARHYLDSMFELHGIIPHLEHYACMIDLLGRVGL 426
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
A + I PI+P+ +W+ LLS C H + LGR AA K+L PE+ SA+I+LSN+
Sbjct: 427 LEDAKKTIDHMPIQPDVHIWQILLSACNIHGHVELGRVAARKLLEIHPENESAYILLSNL 486
Query: 592 YAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
YA MW+ ++RK MKEK+L+K+ G SW ++ K H F + + Q +++ + +L
Sbjct: 487 YASVGMWNAVGRLRKEMKEKNLRKEPGSSWIQVGRKSHTFFVNDTSHPQSKEIYAELIRL 546
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 232/460 (50%), Gaps = 16/460 (3%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N ++ MY + R DA K+FDE+ E +V+SW+ I G + G V L FR+++ L+
Sbjct: 13 NAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERI-GTASDGHEAVEL--FRIVLSLGLD 69
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
N YT + +S +GK+I +++G VSN L++MYGKCG + A V
Sbjct: 70 VNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQICDACRV 129
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F + R+S+SW SL+S+ + G L++F R+ + + + AS+L A + N
Sbjct: 130 FYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAVSNSNNT 189
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
K +QIHSLV KC FD + LI Y +C +D + RVF+ I +L + +I +
Sbjct: 190 KQVIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTF 249
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G +A+ L+ ++S TFS +L A + + + GR +HSL++K GF +
Sbjct: 250 VRAGYYTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDS 309
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
FV ++V+D Y KC + ++ K F + + +WNA++ G+ Y E +L M
Sbjct: 310 FVESSVIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQF 369
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG-----SALVDMYAKCG 428
G P+ TY +L+ ++ + + F+ + +I + ++D+ + G
Sbjct: 370 GIEPDEITYLGVLSSCCHGGLVKEARH----YLDSMFELHGIIPHLEHYACMIDLLGRVG 425
Query: 429 RLNDARKVFDHLSSKNLVS-WNTMLVGYAQHG---LGREA 464
L DA+K DH+ + V W +L HG LGR A
Sbjct: 426 LLEDAKKTIDHMPIQPDVHIWQILLSACNIHGHVELGRVA 465
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 193/400 (48%), Gaps = 21/400 (5%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G+ V N L+ MY K +I DA ++F M R+ +SW++LIS S+ G AL
Sbjct: 101 TGYFQVVSVSNALVSMYGKCGQICDACRVFYNMIIRDSVSWNSLISACSENGFVNQALEV 160
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F M L+P +T + A ++ + + +IH + + G + + +CLI YG+
Sbjct: 161 FYQMRELSLQPTIHTLASILEAVSNSNNTKQVIQIHSLVVKCGFMFDVSMISCLITAYGR 220
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
C + ++ VF + N + ++++++ + G + L ++ + + + +
Sbjct: 221 CNSMDESKRVFAEIDKVNLVHLNTMITTFVRAGYYTDALALYQTIWSLHRKVDSRTFSII 280
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L AC+ + ++++G +HSLV K + D FV +I++Y KC + A + F + + L
Sbjct: 281 LKACSAITDMQLGRAVHSLVLKTGFDQDSFVESSVIDIYCKCGSIGQAEKAFRSSSMNSL 340
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL------GAFADVKETIGG 297
AW+A++ GYA G E DLF KM G+ P E+T+ VL G + + +
Sbjct: 341 AAWNAMMMGYAHHGCYQEVFDLFNKMSQFGIEPDEITYLGVLSSCCHGGLVKEARHYLDS 400
Query: 298 R-QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHL 355
+LH +I + + ++D + LLE++ KT D M + DV W L L
Sbjct: 401 MFELHGIIPHLEHYA------CMIDLLGRVGLLEDAKKTIDHMPIQPDVHIWQIL----L 450
Query: 356 ASCHYGEAIELLK---DMLFEGHCPNLYTYSNILNISSDI 392
++C+ +EL + L E H N Y + N+ + +
Sbjct: 451 SACNIHGHVELGRVAARKLLEIHPENESAYILLSNLYASV 490
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 162/355 (45%), Gaps = 19/355 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ GF +V + L+ Y + + +++++++F E+ + N++ + +I+ F + G A
Sbjct: 199 VVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTFVRAGYYTDA 258
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L ++ + + + T+ + AC++ D + G+ +H + ++G + +S V + +I++
Sbjct: 259 LALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDSFVESSVIDI 318
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A+ F +S + +W +++ Y G + +F + G+ E +
Sbjct: 319 YCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQFGIEPDEITY 378
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFK---CALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
VL +C G +K +F+ + + M I+L + L+ A + +
Sbjct: 379 LGVLSSCCHGGLVKEARHYLDSMFELHGIIPHLEHYACM--IDLLGRVGLLEDAKKTIDH 436
Query: 238 IQL-PDLTAWSAL-----IGGYAQLGKACEAIDLFVK-------MFSSGLMPSEVTFSYV 284
+ + PD+ W L I G+ +LG+ L + + S L S ++ V
Sbjct: 437 MPIQPDVHIWQILLSACNIHGHVELGRVAARKLLEIHPENESAYILLSNLYASVGMWNAV 496
Query: 285 LGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM 339
++KE ++ S I++G S TF N SK E+ E ++ + ++
Sbjct: 497 GRLRKEMKEKNLRKEPGSSWIQVGRKSHTFFVNDTSHPQSK-EIYAELIRLYKQV 550
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM 471
S++ +A++ MYA+CGR DA KVFD ++ ++VSW T +G A G EA+E++ ++
Sbjct: 7 SSMHFSNAVMSMYARCGREVDAIKVFDEIAEPDVVSW-TERIGTASD--GHEAVELFRIV 63
Query: 472 QENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ 531
+ N+ T I VLS + + G ++ G + ++V ++ GQ
Sbjct: 64 LSLGLDVNEYTLINVLSMIGGVKFLNAG-KQIQALCHKTGYFQVVSVSNALVSMYGKCGQ 122
Query: 532 TRRAYEFIKSSPIEPNKVVWRCLLSGC 558
A + I + V W L+S C
Sbjct: 123 ICDACRVFYNMIIR-DSVSWNSLISAC 148
>gi|302801269|ref|XP_002982391.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
gi|300149983|gb|EFJ16636.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
Length = 779
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/599 (31%), Positives = 311/599 (51%), Gaps = 7/599 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + N L+ MY K +++A + EMP+R+VISW+ +ISG++Q G +
Sbjct: 183 VLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQSGDCKEG 242
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M L P TY ++AC+S D GK IH + GL+ + V + L+ M
Sbjct: 243 LRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGM 302
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
YGKCG L + ERN+I+W +++ +Y + +H L+ F + GV +
Sbjct: 303 YGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGVKADAVTF 362
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+LG C+ +L G+ +H + + E V L +YAKC LD A ++F +
Sbjct: 363 VLMLGTCSSPAHLAQGILLHDWISQLGFE-SIIVHNSLTAMYAKCGSLDAARKMFEEMPS 421
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W++L+ Q G +A F +M G P EVT +L A G +
Sbjct: 422 RNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSI 481
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H ++++ GF T VAN ++ Y+K E + FD M E + VSWN ++A ++
Sbjct: 482 HQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLN 541
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA-IEWGKQTHCCIVKPGFDS--NVVIG 417
+A+E+ M + TY L+ S + + GK H ++ GF + + V
Sbjct: 542 RDAVEMFWKMDV---ARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAA 598
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ALV+MY KCG L +ARK+FD + +++V+W +++V YAQH +AL++ +M++ +K
Sbjct: 599 TALVNMYGKCGSLQEARKIFDGMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQEGVK 658
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
+D F+ +LS C H GL+EEG YF SMI D+GISPR++H ++ + G A +
Sbjct: 659 VDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEK 718
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+ P + VW LL+ C+ H + G+ AA +I DP +A+++LSN+Y +
Sbjct: 719 LVDRLPSRSDSKVWMTLLAACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIYTQTQ 777
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 165/563 (29%), Positives = 283/563 (50%), Gaps = 12/563 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG-MPEVALNY 63
G ++ N L+ MY K DA +LF M NV+SW+++I F+Q G + ++
Sbjct: 89 GLETDIYAANALINMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLL 148
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
FR M + PN T V + AC + G+++HG + +G+ L++ + N L++MY K
Sbjct: 149 FRKMELEGIRPNLITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCK 204
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
G + A V +R+ ISW ++S Y Q G+ GL+ ++ G++ ++ + A++
Sbjct: 205 TGGVDEADVVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATL 264
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
L AC+ +L G IH V L+ D+ V L+ +Y KC L+ R + +
Sbjct: 265 LNACSSEEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNT 324
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
AW+ +IG YA+ +A+ F +M G+ VTF +LG + G LH
Sbjct: 325 IAWNTIIGAYARYSDHFQALRSFQQMQLEGVKADAVTFVLMLGTCSSPAHLAQGILLHDW 384
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
I ++GF S V N++ Y+KC L+ + K F+EM + VSWN+L++ + + +A
Sbjct: 385 ISQLGFESI-IVHNSLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAIQHGCHADA 443
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDM 423
+ + M EG P+ T ++L+ + + G H +V+ GFD + +AL+ M
Sbjct: 444 HKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFM 503
Query: 424 YAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTF 483
YAK G AR VFD ++ +N VSWNT+L Y + GL R+A+E++ M + + T+
Sbjct: 504 YAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMD---VARDKVTY 560
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA--SVVHLFACRGQTRRAYEFIKS 541
+ L AC + + + DHG S R+D +A ++V+++ G + A + I
Sbjct: 561 VAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARK-IFD 619
Query: 542 SPIEPNKVVWRCLLSGCKTHKDL 564
+ + V W L+ H ++
Sbjct: 620 GMLHRDVVTWTSLIVAYAQHSEI 642
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/543 (28%), Positives = 271/543 (49%), Gaps = 13/543 (2%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV-ALNYFRLMVCCVLEPNYY 77
MY K ++ A ++F ++ +V +WSAL+ ++ V AL ++ M + P+
Sbjct: 1 MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSV 60
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T+V + AC G G+++H + GLE + + +N LINMYGKC A +F
Sbjct: 61 TFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRM 120
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK---SGVAISEFSCASVLGACAVLGNLK 194
N +SW S++ ++ Q G H+ G + LL RK G+ + + +VL AC NL
Sbjct: 121 ESPNVVSWTSVIGNFAQYG-HL-GRESVLLFRKMELEGIRPNLITMVAVLRAC----NLT 174
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G Q+H V + + D + L+++Y K +D A V + D+ +W+ +I GYA
Sbjct: 175 DGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYA 234
Query: 255 QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTF 314
Q G E + +M GL P++VT++ +L A + ++ G+ +H ++ MG
Sbjct: 235 QSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEV 294
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V + +L Y KC LE+ ++ E+ E + ++WN +I + + +A+ + M EG
Sbjct: 295 VKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEG 354
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
+ T+ +L S + G H I + GF+S +++ ++L MYAKCG L+ AR
Sbjct: 355 VKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFES-IIVHNSLTAMYAKCGSLDAAR 413
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
K+F+ + S+N VSWN+++ QHG +A + + M+ +P++ T I +L AC
Sbjct: 414 KMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQA 473
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
+EG + M+ + G R +++ ++A G A + E N V W +
Sbjct: 474 NAKEG-SSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMA-ERNTVSWNTI 531
Query: 555 LSG 557
L+
Sbjct: 532 LAA 534
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/508 (29%), Positives = 246/508 (48%), Gaps = 18/508 (3%)
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC-GEHVHGLKIFLLSRKSGVAISEF 178
MYGKCG L +A VF + +W +LL +Y + V L+++ + GV
Sbjct: 1 MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSV 60
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ + L AC V G L G ++H+ + + LE D + A LIN+Y KC + A ++FS +
Sbjct: 61 TFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRM 120
Query: 239 QLPDLTAWSALIGGYAQLGK-ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ P++ +W+++IG +AQ G E++ LF KM G+ P+ +T VL A G
Sbjct: 121 ESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLTDG 176
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
RQ+H +++ G S T + N ++D Y K ++E+ EM + DV+SWN +I+G+ S
Sbjct: 177 RQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQS 236
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
E + L M +G P TY+ +LN S + GK H +V G D + V+
Sbjct: 237 GDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVK 296
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
S L+ MY KCG L D ++ + +N ++WNT++ YA++ +AL + MQ +K
Sbjct: 297 SFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGVK 356
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
+ TF+ +L C + +G + I G + H S+ ++A G A +
Sbjct: 357 ADAVTFVLMLGTCSSPAHLAQGI-LLHDWISQLGFESIIVH-NSLTAMYAKCGSLDAARK 414
Query: 538 FIKSSPIEPNKVVWRCLLS-----GCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
+ P N V W L+S GC R K+ + P++ + ML
Sbjct: 415 MFEEMP-SRNSVSWNSLMSAAIQHGCHADAHKFFQRM---KLEGSRPDEVTCISMLDACT 470
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGCS 620
+AN E + + +++ E K TG +
Sbjct: 471 KQANA-KEGSSIHQMVVESGFDKRTGVA 497
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/671 (29%), Positives = 345/671 (51%), Gaps = 14/671 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFS-QIGMPEVALN 62
S ++ LL Y K + A ++F + ++I W+A I + P+ AL
Sbjct: 164 SDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALL 223
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
R M L PN ++V +S+C + IH R+ G + V+ L+ MYG
Sbjct: 224 LVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYG 283
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
+CG + + VF+A RN +SW ++++++ QCG I+ ++ G ++ + +
Sbjct: 284 RCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVT 343
Query: 183 VLGACAVLGNLKVG--MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
L A + +G +H + LE D V L+ +Y +D A F I
Sbjct: 344 ALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPA 403
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+A++ Y G+A EA++LF M L P++V++ VLG DV E R +
Sbjct: 404 KNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE---ARSI 460
Query: 301 HSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
H+ ++ G F+ + +AN V+ +++ LEE++ FD D VSWN +A A
Sbjct: 461 HAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSARED 520
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
AI M EG P+ +T +++++ +D+ +E G+ + + +VV+ S
Sbjct: 521 LHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVAS 580
Query: 419 ALVDMYAKCGR-LNDARKVFDHLSS--KNLVSWNTMLVGYAQHGLGREALEIYSMMQE-N 474
A+++M AKCG +++ ++F + K+LV+WNTM+ YAQHG GR+AL+++ +MQ+ +
Sbjct: 581 AVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRS 640
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR-MDHIASVVHLFACRGQTR 533
++P+ +TF+ VLS C H GLVE+G H F GI + ++H A +V + G R
Sbjct: 641 SVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLR 700
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A +FI+ P+ + VVW LL C ++ DL G AA + D+ +++LSN+YA
Sbjct: 701 EAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYA 760
Query: 594 EANMWDETAKVRKIMKEKSLKKDT-GCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
A W+++ +VR+ M E+ +KK G S ++N++H F + Q ++ + +L
Sbjct: 761 AAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAELERLK 820
Query: 653 VHLFDGGYVPD 663
+ + GYVPD
Sbjct: 821 GLIREAGYVPD 831
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 234/501 (46%), Gaps = 19/501 (3%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T G + C D G+++H ++ + GL N + N L+ MY KC L A F A
Sbjct: 26 TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV-------- 189
R +W +L+++ L ++ ++ + +VLGA A
Sbjct: 86 RSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSS 145
Query: 190 --LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
++ +H + LE D FVA L++ Y KC ++ A VFS IQ+PDL W+
Sbjct: 146 SRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWN 205
Query: 248 ALIGGYA-QLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
A I A + A+ L +M+ GL+P+ +F +L + D R +H+ + +
Sbjct: 206 AAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEE 265
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
+GF VA ++ Y +C ++ES+ F+ M + VSWNA+IA H A +
Sbjct: 266 LGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAI 325
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT--HCCIVKPGFDSNVVIGSALVDMY 424
M EG PN T+ L + + + G+ H I G + +V++G+ALV MY
Sbjct: 326 YWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMY 385
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
G ++ AR FD + +KN+VSWN ML Y +G REA+E+++ M+ + PN +++
Sbjct: 386 GSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYL 445
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS-VVHLFACRGQTRRAYEFIKSSP 543
VL C + ++ + +G+ + IA+ VV +FA G A ++
Sbjct: 446 AVLGCCEDVSEARS----IHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATV 501
Query: 544 IEPNKVVWRCLLSGCKTHKDL 564
++ + V W ++ +DL
Sbjct: 502 VK-DSVSWNTKVAALSAREDL 521
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 228/518 (44%), Gaps = 27/518 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G N + N+L+ MY K ++DA F + R + +W+ LI+ S P
Sbjct: 50 IVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSS---PAAV 106
Query: 61 LN-YFRLMVCCVLE--PNYYTYVGAVSACASRGDAR-----------SGKEIHGRMYRSG 106
+ Y R+ + E PN T + + A AS GD + +H + S
Sbjct: 107 FDLYTRMKLEERAENRPNKLTIIAVLGAIAS-GDPSSSSSSRAPSIAQARIVHDDIRGSD 165
Query: 107 LELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL 166
LE + V+ L++ YGKCG + SA VF + I W + + + C + + L
Sbjct: 166 LERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMA-CAGNDERPDRALLL 224
Query: 167 LSRK--SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK 224
+ R G+ + S ++L +C +L + IH+ V + D VA L+ +Y +
Sbjct: 225 VRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGR 284
Query: 225 CEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYV 284
C +D + VF + + + +W+A+I +AQ G A ++ +M G P+++TF
Sbjct: 285 CGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTA 344
Query: 285 L-GAFADVKETIG-GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH 342
L A + + +G LH I G V ++ Y ++ + FD +
Sbjct: 345 LKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAK 404
Query: 343 DVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTH 402
++VSWNA++ + + EA+EL M + PN +Y +L D+ + H
Sbjct: 405 NIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE---ARSIH 461
Query: 403 CCIVKPG-FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
+V G F I + +V M+A+ G L +A FD K+ VSWNT + +
Sbjct: 462 AEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDL 521
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
A+ + MQ +P+ T + V+ C +G +E G
Sbjct: 522 HGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELG 559
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/600 (31%), Positives = 310/600 (51%), Gaps = 5/600 (0%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A+K+FD M + N W+ +I G+S P AL FR M + P+ YT VSA A+
Sbjct: 71 ARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAA 130
Query: 89 RGDAR---SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
+ +G IH + R G + V + L+N YG + A VF+ ER+ +SW
Sbjct: 131 FAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSW 190
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
S++S+ QCG LK+ + G+ ++ + S+L AC + G +++ V K
Sbjct: 191 TSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK 250
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
+E D + LI++Y KC L A F + +W+ LI G+ Q + EA+ +
Sbjct: 251 FGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRI 310
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F +M G+ P +T VL A A + E G +HS I G + N++++ Y+K
Sbjct: 311 FEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAK 370
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C + + + F M + DVVSW ++ G++ + A L ++M + ++
Sbjct: 371 CGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSL 430
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L+ S + A++ G++ H I + ++ + SALVDMYAKCG ++ A ++F + K
Sbjct: 431 LSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQT 490
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQE-NKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
+SWN M+ G A +G G+EA+E++ M E KP+ T VL AC H+G+V+EG YF
Sbjct: 491 LSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYF- 549
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
++ G+ P +H +V L G A+ FIK PIEPN V+W LL+ C+ H +
Sbjct: 550 YLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRM 609
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
LG+ + I++ P D H+++SN++AE + WD+ VR +M + ++K G S ++
Sbjct: 610 DLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 228/457 (49%), Gaps = 4/457 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF +V + L+ Y F + +A K+F+EM ER+V+SW+++IS +Q G + L
Sbjct: 151 GFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKML 210
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M + PN T + +SAC G+ ++ ++ + G+E + + N LI+MY KC
Sbjct: 211 SEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKC 270
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G LS A F A R + SW +L+ + Q EH L+IF GV + SVL
Sbjct: 271 GCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVL 330
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA LG L+ GM +HS + + D + LIN+YAKC + A RVF + D+
Sbjct: 331 SACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVV 390
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ ++ GY + + A +LF +M + ++ E+ +L A + + GR++HS I
Sbjct: 391 SWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYI 450
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EA 363
+M + + + ++D Y+KC ++ + + F +M +SWNA+I G LAS YG EA
Sbjct: 451 EEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGG-LASNGYGKEA 509
Query: 364 IELLKDML-FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
+EL ML + P+ T +L + + ++ G + + G + +VD
Sbjct: 510 VELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVD 569
Query: 423 MYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
+ + G L++A + N V W ++L H
Sbjct: 570 LLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVH 606
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 241/491 (49%), Gaps = 11/491 (2%)
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL---LSS 129
P + + + ACASR E+HGR+ R+ L +S V+ LI + +
Sbjct: 14 RPIRHHLLAYLDACASRAHL---AELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRY 70
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A+ VFD + N+ W ++ Y C L +F R+ GV+ ++ A+V+ A A
Sbjct: 71 ARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAA 130
Query: 190 LGNLK---VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
LK G IH+LV + D FV GL+N Y ++ AS+VF + D+ +W
Sbjct: 131 FAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSW 190
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+++I AQ G + + + +M + G++P++VT +L A + GR +++ + K
Sbjct: 191 TSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK 250
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G + + N ++ Y+KC L ++L+ F M SWN LI G + + + EA+ +
Sbjct: 251 FGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRI 310
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
++ML G P+ T ++L+ + + + G H I G + ++ ++L++MYAK
Sbjct: 311 FEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAK 370
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + A +VF ++ K++VSW M+ GY + A ++ M+ ++ ++ + +
Sbjct: 371 CGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSL 430
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC +G +++G +S I + ++ + +++V ++A G A E +
Sbjct: 431 LSACSQLGALDKG-REIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQ-HK 488
Query: 547 NKVVWRCLLSG 557
+ W ++ G
Sbjct: 489 QTLSWNAMIGG 499
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/576 (32%), Positives = 310/576 (53%), Gaps = 41/576 (7%)
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A VF+ E N + W + + + V LK++++ G+ + F+ +L +
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN--------- 237
CA K G QIH V K + D +V LI++YA+ +L+ A +VF
Sbjct: 85 CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144
Query: 238 ----------------------IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
I + D+ +W+A+I GYA+ G +A++LF +M + +
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
P E T + V+ A A GRQ+HS I GF S + N ++D YSKC +E + +
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACEL 264
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
+ + DV+SWN LI G+ Y EA+ L ++ML G PN T +IL + + AI
Sbjct: 265 LEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 324
Query: 396 EWGKQTHCCIVKPGFDSNVVIGSA------LVDMYAKCGRLNDARKVFDHLS-SKNLVSW 448
+ G+ H I K VV+ +A L+DMYAKCG ++ A +V D + +++L +W
Sbjct: 325 DIGRWIHVYIDKKL--KGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTW 382
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
N M+ G+A HG A +I+S M++N I+P+D TF+G+LSAC H G+++ G + F SM +
Sbjct: 383 NAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQ 442
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
D+ I+P+++H ++ L G + A E I + P+EP+ V+W LL CK H +L LG
Sbjct: 443 DYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGE 502
Query: 569 YAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT-GCSWTELQNK 627
A+K++ +PE+ ++++LSN+YA A W+E K+R ++ +K +KK GCS E+ +
Sbjct: 503 SFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSV 562
Query: 628 MHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
+H F Q +++ ++ ++ V L + G+VPD
Sbjct: 563 VHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPD 598
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 222/478 (46%), Gaps = 44/478 (9%)
Query: 23 FSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGA 82
F + A +F+ +PE N + W+ + G + P AL + +M+ L PN++T+
Sbjct: 22 FDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFL 81
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
+ +CA + G++IHG + + G +L+ +V LI+MY + G L AQ VFD S R+
Sbjct: 82 LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDV 141
Query: 143 IS-------------------------------WVSLLSSYCQCGEHVHGLKIFLLSRKS 171
+S W +++S Y + G + L++F K+
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
V E + A+V+ ACA G++++G Q+HS + + + LI+LY+KC +++ A
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETA 261
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+ + D+ +W+ LIGGY + EA+ LF +M SG P++VT +L A A +
Sbjct: 262 CELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 321
Query: 292 KETIGGRQLHSLIIK----MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVS 346
GR +H I K + ++ + + +++D Y+KC ++ + + D + +
Sbjct: 322 GAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLST 381
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
WNA+I G A ++ M G P+ T+ +L+ S ++ G+ +
Sbjct: 382 WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMR 441
Query: 407 KPGFDSNVVIG----SALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
+ D N+ ++D+ G +A ++ + + + V W ++L HG
Sbjct: 442 Q---DYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHG 496
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 156/286 (54%), Gaps = 5/286 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H +V++Y L+ Y I AQK+FDE+P ++V+SW+A+ISG+++ G + AL F+
Sbjct: 138 HRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKE 197
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ ++P+ T VSACA G G+++H + G N + N LI++Y KCG
Sbjct: 198 MMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGE 257
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
+ +A + + ++ ISW +L+ Y + L +F +SG ++ + S+L A
Sbjct: 258 VETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 317
Query: 187 CAVLGNLKVGMQIHSLVFK----CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-P 241
CA LG + +G IH + K + + LI++YAKC +D A +V +
Sbjct: 318 CAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNR 377
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
L+ W+A+I G+A G+A A D+F +M +G+ P ++TF +L A
Sbjct: 378 SLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSA 423
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF N+ N L+ +Y K + A +L + + ++VISW+ LI G++ + + + AL F
Sbjct: 237 GFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLF 296
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIH---GRMYRSGLELN-SHVSNCLINM 120
+ M+ PN T + + ACA G G+ IH + + + N S + LI+M
Sbjct: 297 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDM 356
Query: 121 YGKCGLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG + +A V D+S S+S W +++ + G IF RK+G+ + +
Sbjct: 357 YAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDIT 416
Query: 180 CASVLGACAVLGNLKVGMQI 199
+L AC+ G L +G I
Sbjct: 417 FVGLLSACSHSGMLDLGRNI 436
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 16 LLLMYVKFSRINDAQKLFDEMP-ERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEP 74
L+ MY K I+ A ++ D R++ +W+A+I GF+ G A + F M +EP
Sbjct: 353 LIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEP 412
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSN--CLINMYGKCGLLSSAQF 132
+ T+VG +SAC+ G G+ I R R + + + C+I++ G GL A+
Sbjct: 413 DDITFVGLLSACSHSGMLDLGRNIF-RSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEE 471
Query: 133 VFDA-SLERNSISWVSLLSSYCQCGEHVHG 161
+ + +E + + W SLL + C+ +HG
Sbjct: 472 MINTMPMEPDGVIWCSLLKA-CK----IHG 496
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/600 (31%), Positives = 310/600 (51%), Gaps = 5/600 (0%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A+K+FD M + N W+ +I G+S P AL FR M + P+ YT VSA A+
Sbjct: 71 ARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAA 130
Query: 89 RGDAR---SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
+ +G IH + R G + V + L+N YG + A VF+ ER+ +SW
Sbjct: 131 FAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSW 190
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
S++S+ QCG LK+ + G+ ++ + S+L AC + G +++ V K
Sbjct: 191 TSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK 250
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
+E D + LI++Y KC L A F + +W+ LI G+ Q + EA+ +
Sbjct: 251 FGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRI 310
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F +M G+ P +T VL A A + E G +HS I G + N++++ Y+K
Sbjct: 311 FEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAK 370
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C + + + F M + DVVSW ++ G++ + A L ++M + ++
Sbjct: 371 CGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSL 430
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L+ S + A++ G++ H I + ++ + SALVDMYAKCG ++ A ++F + K
Sbjct: 431 LSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQT 490
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQE-NKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
+SWN M+ G A +G G+EA+E++ M E KP+ T VL AC H+G+V+EG YF
Sbjct: 491 LSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYF- 549
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
++ G+ P +H +V L G A+ FIK PIEPN V+W LL+ C+ H +
Sbjct: 550 YLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRM 609
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
LG+ + I++ P D H+++SN++AE + WD+ VR +M + ++K G S ++
Sbjct: 610 DLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 228/457 (49%), Gaps = 4/457 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF +V + L+ Y F + +A K+F+EM ER+V+SW+++IS +Q G + L
Sbjct: 151 GFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKML 210
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M + PN T + +SAC G+ ++ ++ + G+E + + N LI+MY KC
Sbjct: 211 SEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKC 270
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G LS A F A R + SW +L+ + Q EH L+IF GV + SVL
Sbjct: 271 GCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVL 330
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
ACA LG L+ GM +HS + + D + LIN+YAKC + A RVF + D+
Sbjct: 331 SACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVV 390
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ ++ GY + + A +LF +M + ++ E+ +L A + + GR++HS I
Sbjct: 391 SWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYI 450
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EA 363
+M + + + ++D Y+KC ++ + + F +M +SWNA+I G LAS YG EA
Sbjct: 451 EEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGG-LASNGYGKEA 509
Query: 364 IELLKDML-FEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
+EL ML + P+ T +L + + ++ G + + G + +VD
Sbjct: 510 VELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVD 569
Query: 423 MYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
+ + G L++A + N V W ++L H
Sbjct: 570 LLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVH 606
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 240/491 (48%), Gaps = 11/491 (2%)
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL---LSS 129
P + + + ACASR E+HGR+ R+ L +S V+ LI + +
Sbjct: 14 RPIRHHLLAYLDACASRAHL---AELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRY 70
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A+ VFD + N+ W ++ Y C L +F R+ GV+ ++ A+V+ A A
Sbjct: 71 ARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAA 130
Query: 190 LGNLK---VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
LK G IH+LV + D FV GL+N Y + AS+VF + D+ +W
Sbjct: 131 FAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSW 190
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+++I AQ G + + + +M + G++P++VT +L A + GR +++ + K
Sbjct: 191 TSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK 250
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G + + N ++ Y+KC L ++L+ F M SWN LI G + + + EA+ +
Sbjct: 251 FGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRI 310
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
++ML G P+ T ++L+ + + + G H I G + ++ ++L++MYAK
Sbjct: 311 FEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAK 370
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG + A +VF ++ K++VSW M+ GY + A ++ M+ ++ ++ + +
Sbjct: 371 CGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSL 430
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC +G +++G +S I + ++ + +++V ++A G A E +
Sbjct: 431 LSACSQLGALDKG-REIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQ-HK 488
Query: 547 NKVVWRCLLSG 557
+ W ++ G
Sbjct: 489 QTLSWNAMIGG 499
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 192/614 (31%), Positives = 315/614 (51%), Gaps = 36/614 (5%)
Query: 84 SACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF---VFDASLER 140
SA +S K++H ++ RS L+ ++ + L+ C L SS + VF+ +
Sbjct: 28 SALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLV--ISSCALSSSLDYALSVFNLIPKP 85
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
+ L + E L ++ R G+A+ FS +L A + + +L G++IH
Sbjct: 86 ETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIH 145
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
L K + D FV GL+ +YA C ++ A +F + D+ WS +I GY Q G
Sbjct: 146 GLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFN 205
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG------------ 308
+A+ LF +M + + P E+ S VL A G+ +H I++
Sbjct: 206 DALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALV 265
Query: 309 ---------------FSSFT---FVANTVL-DFYSKCELLEESLKTFDEMDEHDVVSWNA 349
F T VA+T + YSK +E + F++M + D+V W+A
Sbjct: 266 TMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSA 325
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
+I+G+ S EA+ L +M G P+ T +++ + + A++ K H + K G
Sbjct: 326 MISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNG 385
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
F + I +AL++MYAKCG L AR++FD + KN++SW M+ +A HG AL +
Sbjct: 386 FGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFH 445
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M++ I+PN TF+GVL AC H GLVEEG F SMI +H I+P+ H +V LF
Sbjct: 446 QMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRA 505
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
R A E +++ P+ PN ++W L++ C+ H ++ LG +AA+++L DP+ AH+ LS
Sbjct: 506 NLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLS 565
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMN 649
N+YA+A W++ +VRK+MK K + K+ GCS EL N++H F + + +++E +
Sbjct: 566 NIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLY 625
Query: 650 QLSVHLFDGGYVPD 663
++ L GY P+
Sbjct: 626 EVVSKLKLVGYSPN 639
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 205/469 (43%), Gaps = 33/469 (7%)
Query: 24 SRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAV 83
S ++ A +F+ +P+ + + S+ PE L + M L + +++ +
Sbjct: 70 SSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLL 129
Query: 84 SACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSI 143
A + G EIHG + G + + V L+ MY CG ++ A+ +FD R+ +
Sbjct: 130 KALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVV 189
Query: 144 SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV 203
+W ++ YCQ G L +F + V E ++VL AC GNL G IH +
Sbjct: 190 TWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFI 249
Query: 204 FKCALEFDKFVAMGLINLYAKCEKLDL-------------------------------AS 232
+ + D + L+ +YA C +DL A
Sbjct: 250 MENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENAR 309
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
VF+ + DL WSA+I GYA+ EA++LF +M S G+ P +VT V+ A A +
Sbjct: 310 SVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLG 369
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
+ +H + K GF + N +++ Y+KC LE + + FD+M +V+SW +I+
Sbjct: 370 ALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMIS 429
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT-HCCIVKPGFD 411
G A+ M E PN T+ +L S +E G++ + I +
Sbjct: 430 AFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNIT 489
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG 459
V +VD++ + L +A ++ + + + N++ W +++ HG
Sbjct: 490 PKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHG 538
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 180/395 (45%), Gaps = 37/395 (9%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + L+ MY RI +A+ +FD+M R+V++WS +I G+ Q G+ AL F
Sbjct: 152 GFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLF 211
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
M +EP+ +SAC G+ GK IH + + + ++ H+ + L+ MY C
Sbjct: 212 EEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASC 271
Query: 125 -------------------------------GLLSSAQFVFDASLERNSISWVSLLSSYC 153
G + +A+ VF+ ++++ + W +++S Y
Sbjct: 272 GSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYA 331
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
+ L +F + G+ + + SV+ ACA LG L IH V K
Sbjct: 332 ESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALP 391
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
+ LI +YAKC L+ A R+F + ++ +W+ +I +A G A A+ F +M
Sbjct: 392 INNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDEN 451
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQL-HSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
+ P+ +TF VL A + GR++ +S+I + + ++D + + LL E+
Sbjct: 452 IEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREA 511
Query: 333 LKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIEL 366
L+ + M +V+ W +L +A+C IEL
Sbjct: 512 LELVEAMPLAPNVIIWGSL----MAACRVHGEIEL 542
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+GF + N L+ MY K + A+++FD+MP +NVISW+ +IS F+ G AL +
Sbjct: 384 NGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRF 443
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVS-NCLINMYG 122
F M +EPN T+VG + AC+ G G++I M HV C+++++G
Sbjct: 444 FHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFG 503
Query: 123 KCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHG 161
+ LL A + V L N I W SL+++ C+ VHG
Sbjct: 504 RANLLREALELVEAMPLAPNVIIWGSLMAA-CR----VHG 538
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 276/484 (57%), Gaps = 2/484 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L C ++ G ++H+ + K ++ LI LY KC+ L A +F +
Sbjct: 67 SILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQR 126
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ +W+A+I Y+Q G A EA++LFV+M S P+ TF+ +L + GRQ+H
Sbjct: 127 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 186
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
S+ IK + S FV +++LD Y+K + ++ F + E DVV+ A+I+G+
Sbjct: 187 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 246
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
EA++L + + EG N TY+++L S + A+ GKQ H +++ G S VV+ ++L+
Sbjct: 247 EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLI 306
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMM-QENKIKPND 480
DMY+KCG + AR++FD + + +SWN MLVGY++HG+ RE LE++ +M +ENK+KP+
Sbjct: 307 DMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDS 366
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIR-DHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
T++ VLS C H L + G F +M+ GI P + H VV L G+ A++FI
Sbjct: 367 ITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFI 426
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
K P P +W LL C+ H D+ +G +K+L +PE+ +++LSN+YA A W+
Sbjct: 427 KKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWE 486
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
+ +R +M+EK++ K+ G SW EL +H F S + ++ + +LS+ + G
Sbjct: 487 DMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKEDG 546
Query: 660 YVPD 663
YVPD
Sbjct: 547 YVPD 550
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 197/387 (50%), Gaps = 10/387 (2%)
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
E + Y ++ C S+ R G+ +H M ++ + ++ LI +Y KC L A+
Sbjct: 59 EVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARG 118
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
+FD +RN +SW +++S+Y Q G L +F+ +S + F+ A++L +C
Sbjct: 119 MFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLG 178
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
+ G QIHS+ K E FV L+++YAK ++ A VF + D+ A +A+I G
Sbjct: 179 FETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISG 238
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
YAQ+G EA+ LF ++ G+ + VT++ VL A + + G+Q+HS +++ G S+
Sbjct: 239 YAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSY 298
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+ N+++D YSKC + + + FD M E +SWNA++ G+ E +EL K M
Sbjct: 299 VVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMRE 358
Query: 373 EGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIV--KPGFDSNVVIGSALVDMYAKCGR 429
E P+ TY +L+ S + G + +V K G + ++ +VD+ + GR
Sbjct: 359 ENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGR 418
Query: 430 LNDARKVFDHLSSKNLVS----WNTML 452
+ +A FD + V W ++L
Sbjct: 419 VEEA---FDFIKKMPFVPTAAIWGSLL 442
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 187/369 (50%), Gaps = 6/369 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI + + P+V L+++Y K + DA+ +FDEMP+RNV+SW+A+IS +SQ G A
Sbjct: 88 MIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEA 147
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
LN F M+ EPN++T+ +++C +G++IH + E + V + L++M
Sbjct: 148 LNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDM 207
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y K G + A VF ER+ ++ +++S Y Q G LK+F + G+ + +
Sbjct: 208 YAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTY 267
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
ASVL A + L L G Q+HS V + + LI++Y+KC + A R+F ++
Sbjct: 268 ASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPE 327
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFADVK-ETIGGR 298
+W+A++ GY++ G A E ++LF M + P +T+ VL + + E +G
Sbjct: 328 RTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLE 387
Query: 299 QLHSLII-KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
++++ K G V+D + +EE+ FD + + V A+ L S
Sbjct: 388 IFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA---FDFIKKMPFVPTAAIWGSLLGS 444
Query: 358 CHYGEAIEL 366
C +E+
Sbjct: 445 CRVHSDVEI 453
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%)
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
C G+ E L M G Y +ILN AI G++ H ++K + +V +
Sbjct: 41 CSSGQLKEALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLR 100
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ L+ +Y KC L DAR +FD + +N+VSW M+ Y+Q G EAL ++ M + +
Sbjct: 101 TRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTE 160
Query: 478 PNDNTFIGVLSAC 490
PN TF +L++C
Sbjct: 161 PNHFTFATILTSC 173
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.136 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,391,956,447
Number of Sequences: 23463169
Number of extensions: 424384436
Number of successful extensions: 1104858
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8906
Number of HSP's successfully gapped in prelim test: 2664
Number of HSP's that attempted gapping in prelim test: 864037
Number of HSP's gapped (non-prelim): 78619
length of query: 672
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 522
effective length of database: 8,839,720,017
effective search space: 4614333848874
effective search space used: 4614333848874
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 81 (35.8 bits)