BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005881
(672 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/667 (37%), Positives = 391/667 (58%), Gaps = 6/667 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I GF +V L+ Y+K S D +K+FDEM ERNV++W+ LISG+++ M + L
Sbjct: 120 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVL 179
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M +PN +T+ A+ A G G ++H + ++GL+ VSN LIN+Y
Sbjct: 180 TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A+ +FD + ++ ++W S++S Y G + L +F R + V +SE S A
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFA 299
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-L 240
SV+ CA L L+ Q+H V K FD+ + L+ Y+KC + A R+F I +
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+A+I G+ Q EA+DLF +M G+ P+E T+S +L A I ++
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEV 415
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ ++K + + V +LD Y K +EE+ K F +D+ D+V+W+A++AG+ +
Sbjct: 416 HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET 475
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA-IEWGKQTHCCIVKPGFDSNVVIGSA 419
AI++ ++ G PN +T+S+ILN+ + A + GKQ H +K DS++ + SA
Sbjct: 476 EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSA 535
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+ MYAK G + A +VF K+LVSWN+M+ GYAQHG +AL+++ M++ K+K +
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
TFIGV +AC H GLVEEG YF+ M+RD I+P +H + +V L++ GQ +A + I
Sbjct: 596 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 655
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
++ P +WR +L+ C+ HK LGR AAEKI++ PED++A+++LSN+YAE+ W
Sbjct: 656 ENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQ 715
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGG 659
E AKVRK+M E+++KK+ G SW E++NK + F + ++ + LS L D G
Sbjct: 716 ERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLG 775
Query: 660 YVPDPIY 666
Y PD Y
Sbjct: 776 YEPDTSY 782
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 162/546 (29%), Positives = 279/546 (51%), Gaps = 14/546 (2%)
Query: 21 VKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYV 80
V SR+ +A LFD+ P R+ S+ +L+ GFS+ G + A F + +E + +
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 81 GAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
+ A+ D G+++H + + G + V L++ Y K + VFD ER
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
N ++W +L+S Y + + L +F+ + G + F+ A+ LG A G G+Q+H
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
++V K L+ V+ LINLY KC + A +F ++ + W+++I GYA G
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
EA+ +F M + + SE +F+ V+ A++KE QLH ++K GF + ++
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 321 DFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNL 379
YSKC + ++L+ F E+ +VVSW A+I+G L + EA++L +M +G PN
Sbjct: 338 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNE 397
Query: 380 YTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDH 439
+TYS IL + +P I + H +VK ++ + +G+AL+D Y K G++ +A KVF
Sbjct: 398 FTYSVIL---TALPVIS-PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 453
Query: 440 LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
+ K++V+W+ ML GYAQ G A++++ + + IKPN+ TF +L+ C
Sbjct: 454 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513
Query: 500 WHYFNSMIRDHGISPRMDH----IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
F+ I R+D ++++ ++A +G A E K E + V W ++
Sbjct: 514 GKQFHGF----AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMI 568
Query: 556 SGCKTH 561
SG H
Sbjct: 569 SGYAQH 574
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 245/499 (49%), Gaps = 24/499 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G + N L+ +Y+K + A+ LFD+ ++V++W+++ISG++ G+ A
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M + + ++ + CA+ + R +++H + + G + ++ L+
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVA 339
Query: 121 YGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KC +L + + + N +SW +++S + Q + +F ++ GV +EF+
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFT 399
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
+ +L A V+ ++H+ V K E V L++ Y K K++ A++VFS I
Sbjct: 400 YSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID 455
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GR 298
D+ AWSA++ GYAQ G+ AI +F ++ G+ P+E TFS +L A ++G G+
Sbjct: 456 DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGK 515
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q H IK S V++ +L Y+K +E + + F E D+VSWN++I+G+
Sbjct: 516 QFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHG 575
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSN 413
+A+++ K+M + T+ + + +E G++ C + P + N
Sbjct: 576 QAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN 635
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG---LGREALEIYS 469
S +VD+Y++ G+L A KV +++ + W T+L H LGR A E
Sbjct: 636 ----SCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKII 691
Query: 470 MMQENKIKPNDNTFIGVLS 488
M KP D+ +LS
Sbjct: 692 AM-----KPEDSAAYVLLS 705
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/658 (34%), Positives = 378/658 (57%), Gaps = 4/658 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF +V L+ Y+K I+ A+ +FD +PE++ ++W+ +ISG ++G V+
Sbjct: 174 LVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVS 233
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F ++ + P+ Y +SAC+ GK+IH + R GLE+++ + N LI+
Sbjct: 234 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDS 293
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + +A +F+ +N ISW +LLS Y Q H +++F K G+ ++C
Sbjct: 294 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYAC 353
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L +CA L L G Q+H+ K L D +V LI++YAKC+ L A +VF
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA 413
Query: 241 PDLTAWSALIGGYAQLGKACE---AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
D+ ++A+I GY++LG E A+++F M + PS +TF +L A A +
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLS 473
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+Q+H L+ K G + F + ++D YS C L++S FDEM D+V WN++ AG++
Sbjct: 474 KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQ 533
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
EA+ L ++ P+ +T++N++ + ++ +++ G++ HC ++K G + N I
Sbjct: 534 SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYIT 593
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL+DMYAKCG DA K FD +S+++V WN+++ YA HG G++AL++ M I+
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 653
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
PN TF+GVLSAC H GLVE+G F M+R GI P +H +V L G+ +A E
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARE 712
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
I+ P +P +VWR LLSGC ++ L +AAE + +DP+D+ + MLSN+YA M
Sbjct: 713 LIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGM 772
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
W E KVR+ MK + + K+ G SW + ++H F + + + ++EV++ L V +
Sbjct: 773 WTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830
Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 188/669 (28%), Positives = 335/669 (50%), Gaps = 54/669 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G + N L+ +Y + + A+K+F++MPERN++SWS ++S + G+ E +
Sbjct: 70 IIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEES 129
Query: 61 LNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGK----EIHGRMYRSGLELNSHVSN 115
L F PN Y + AC+ D R G+ ++ + +SG + + +V
Sbjct: 130 LVVFLEFWRTRKDSPNEYILSSFIQACSGL-DGR-GRWMVFQLQSFLVKSGFDRDVYVGT 187
Query: 116 CLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
LI+ Y K G + A+ VFDA E+++++W +++S + G L++F + V
Sbjct: 188 LLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVP 247
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF 235
+ ++VL AC++L L+ G QIH+ + + LE D + LI+ Y KC ++ A ++F
Sbjct: 248 DGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLF 307
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+ + ++ +W+ L+ GY Q EA++LF M GL P S +L + A +
Sbjct: 308 NGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALG 367
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G Q+H+ IK + ++V N+++D Y+KC+ L ++ K FD DVV +NA+I G+
Sbjct: 368 FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYS 427
Query: 356 ---ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
EA+ + +DM F P+L T+ ++L S+ + ++ KQ H + K G +
Sbjct: 428 RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL 487
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
++ GSAL+D+Y+ C L D+R VFD + K+LV WN+M GY Q EAL ++ +Q
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI------------------SP 514
++ +P++ TF +++A ++ V+ G F+ + G+ SP
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLG-QEFHCQLLKRGLECNPYITNALLDMYAKCGSP 606
Query: 515 RMDHIA-------------SVVHLFACRGQTRRAYEFIK---SSPIEPNKVVWRCLLSGC 558
H A SV+ +A G+ ++A + ++ S IEPN + + +LS C
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
Query: 559 KTHKDLV---LGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
+H LV L ++ +PE T ++ + ++ A + K R+++ EK K
Sbjct: 667 -SHAGLVEDGLKQFELMLRFGIEPE-TEHYVCMVSLLGRAGRLN---KARELI-EKMPTK 720
Query: 616 DTGCSWTEL 624
W L
Sbjct: 721 PAAIVWRSL 729
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 251/472 (53%), Gaps = 20/472 (4%)
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
+HG++ GLEL++++SN LIN+Y + G + A+ VF+ ERN +SW +++S+ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 158 HVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGM--QIHSLVFKCALEFDKFV 214
+ L +FL R + +E+ +S + AC+ L M Q+ S + K + D +V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 215 AMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGL 274
LI+ Y K +D A VF + W+ +I G ++G++ ++ LF ++ +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
+P S VL A + + GG+Q+H+ I++ G + N ++D Y KC + + K
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 335 TFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPA 394
F+ M +++SW L++G+ + + EA+EL M G P++Y S+IL + + A
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
+ +G Q H +K ++ + ++L+DMYAKC L DARKVFD ++ ++V +N M+ G
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425
Query: 455 YAQHGLG---REALEIYSMMQENKIKPNDNTFIGVLSAC---VHIGLVEEGWHYFNSMIR 508
Y++ G EAL I+ M+ I+P+ TF+ +L A +GL ++ + ++
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ----IHGLMF 481
Query: 509 DHGISPRMDHIASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+G++ + ++++ +++ C +R ++ +K + V+W + +G
Sbjct: 482 KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDL----VIWNSMFAG 529
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 7/181 (3%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
++ +L + + + + H I+ G + + + + L+++Y++ G + ARKVF+ +
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSACVHIGLVEEG- 499
+NLVSW+TM+ HG+ E+L ++ + K PN+ + AC GL G
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGR 164
Query: 500 WHYF--NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
W F S + G + ++ + G A + P E + V W ++SG
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISG 223
Query: 558 C 558
C
Sbjct: 224 C 224
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/659 (33%), Positives = 366/659 (55%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF + N L+ +Y + A+ +F M +R+ ++++ LI+G SQ G E A+ F
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ M LEP+ T V AC++ G G+++H + G N+ + L+N+Y KC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ +A F + N + W +L +Y + + +IF + + ++++ S+L
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
C LG+L++G QIHS + K + + +V LI++YAK KLD A + D+
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 557
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+ +I GY Q +A+ F +M G+ EV + + A A ++ G+Q+H+
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA 617
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
GFSS N ++ YS+C +EES F++ + D ++WNAL++G S + EA+
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
+ M EG N +T+ + + +S+ ++ GKQ H I K G+DS + +AL+ MY
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMY 737
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG ++DA K F +S+KN VSWN ++ Y++HG G EAL+ + M + ++PN T +
Sbjct: 738 AKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLV 797
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVLSAC HIGLV++G YF SM ++G+SP+ +H VV + G RA EFI+ PI
Sbjct: 798 GVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI 857
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+P+ +VWR LLS C HK++ +G +AA +L +PED++ +++LSN+YA + WD
Sbjct: 858 KPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLT 917
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
R+ MKEK +KK+ G SW E++N +H F ++HE L+ + GYV D
Sbjct: 918 RQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 976
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/532 (29%), Positives = 269/532 (50%), Gaps = 7/532 (1%)
Query: 29 AQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 88
A K+FDEMPER + +W+ +I + + F MV + PN T+ G + AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-- 196
Query: 89 RGDARS---GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
RG + + ++IH R+ GL ++ V N LI++Y + G + A+ VFD ++ SW
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
V+++S + +++F G+ + ++ +SVL AC + +L++G Q+H LV K
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
D +V L++LY L A +FSN+ D ++ LI G +Q G +A++L
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSK 325
F +M GL P T + ++ A + G+QLH+ K+GF+S + +L+ Y+K
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 326 CELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
C +E +L F E + +VV WN ++ + + + + M E PN YTY +I
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL 445
L + +E G+Q H I+K F N + S L+DMYAK G+L+ A + + K++
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 446 VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
VSW TM+ GY Q+ +AL + M + I+ ++ +SAC + ++EG ++
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHA 615
Query: 506 MIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G S + ++V L++ G+ +Y + + N + W L+SG
Sbjct: 616 QACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSG 666
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/562 (23%), Positives = 274/562 (48%), Gaps = 4/562 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + + N L+ +Y + ++ A+++FD + ++ SW A+ISG S+ A
Sbjct: 213 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEA 272
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M + P Y + +SAC G+++HG + + G +++V N L+++
Sbjct: 273 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 332
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G L SA+ +F +R+++++ +L++ QCG +++F G+ +
Sbjct: 333 YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 392
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS++ AC+ G L G Q+H+ K + + L+NLYAKC ++ A F ++
Sbjct: 393 ASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV 452
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ W+ ++ Y L + +F +M ++P++ T+ +L + + G Q+
Sbjct: 453 ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI 512
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS IIK F +V + ++D Y+K L+ + DVVSW +IAG+
Sbjct: 513 HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFD 572
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+A+ + ML G + +N ++ + + A++ G+Q H GF S++ +AL
Sbjct: 573 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNAL 632
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
V +Y++CG++ ++ F+ + + ++WN ++ G+ Q G EAL ++ M I N+
Sbjct: 633 VTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN 692
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFA-CRGQTRRAYEFI 539
TF + A +++G +++I G + +++ ++A C + +F+
Sbjct: 693 FTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFL 751
Query: 540 KSSPIEPNKVVWRCLLSGCKTH 561
+ S N+V W +++ H
Sbjct: 752 EVST--KNEVSWNAIINAYSKH 771
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 225/443 (50%), Gaps = 10/443 (2%)
Query: 72 LEPNYYTYVGAVSAC-ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
+ PN+ T + C + G G+++H ++ + GL+ N +S L + Y G L A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 131 QFVFDASLERNSISW---VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
VFD ER +W + L+S GE V GL + ++S V +E + + VL AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGE-VFGLFVRMVSE--NVTPNEGTFSGVLEAC 196
Query: 188 AVLG-NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
V QIH+ + L V LI+LY++ +DLA RVF ++L D ++W
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
A+I G ++ EAI LF M+ G+MP+ FS VL A ++ G QLH L++K
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGE-AIE 365
+GFSS T+V N ++ Y L + F M + D V++N LI G L+ C YGE A+E
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING-LSQCGYGEKAME 375
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L K M +G P+ T ++++ S + G+Q H K GF SN I AL+++YA
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KC + A F +N+V WN MLV Y R + I+ MQ +I PN T+
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 495
Query: 486 VLSACVHIGLVEEGWHYFNSMIR 508
+L C+ +G +E G + +I+
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIK 518
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 176/355 (49%), Gaps = 2/355 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I + F N + L+ MY K +++ A + ++V+SW+ +I+G++Q + A
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR M+ + + AVSACA + G++IH + SG + N L+ +
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y +CG + + F+ + ++I+W +L+S + Q G + L++F+ + G+ + F+
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S + A + N+K G Q+H+++ K + + V LI++YAKC + A + F +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG-RQ 299
+ +W+A+I Y++ G EA+D F +M S + P+ VT VL A + + G
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
S+ + G S V+D ++ LL + + EM + D + W L++
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 188/377 (49%), Gaps = 13/377 (3%)
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
G G+L G ++HS + K L+ + ++ L + Y L A +VF + +
Sbjct: 93 GCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIF 152
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVL-----GAFA-DVKETIGGR 298
W+ +I A E LFV+M S + P+E TFS VL G+ A DV E
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE----- 207
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H+ I+ G T V N ++D YS+ ++ + + FD + D SW A+I+G +
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EAI L DM G P Y +S++L+ I ++E G+Q H ++K GF S+ + +
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALV +Y G L A +F ++S ++ V++NT++ G +Q G G +A+E++ M + ++P
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ NT ++ AC G + G ++ G + ++++L+A A ++
Sbjct: 388 DSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 539 IKSSPIEPNKVVWRCLL 555
+ +E N V+W +L
Sbjct: 447 FLETEVE-NVVLWNVML 462
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 4/287 (1%)
Query: 273 GLMPSEVTFSYVL-GAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
G+ P+ T ++L G GR+LHS I+K+G S ++ + DFY L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI-SS 390
+ K FDEM E + +WN +I + GE L M+ E PN T+S +L
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
A + +Q H I+ G + V+ + L+D+Y++ G ++ AR+VFD L K+ SW
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
M+ G +++ EA+ ++ M I P F VLSAC I +E G + ++
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG-EQLHGLVLKL 317
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G S ++V L+ G A E I S+ + + V + L++G
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISA-EHIFSNMSQRDAVTYNTLING 363
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/656 (35%), Positives = 374/656 (57%), Gaps = 30/656 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G +V+ + LL MY K R ++ ++F +PE+N +SWSA+I+G Q + +A
Sbjct: 206 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 265
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F+ M + Y + +CA+ + R G ++H +S + V ++M
Sbjct: 266 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 325
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK---SGVAISE 177
Y KC + AQ +FD S N S+ ++++ Y Q HG K LL + SG+ E
Sbjct: 326 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ---EEHGFKALLLFHRLMSSGLGFDE 382
Query: 178 FSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
S + V ACA++ L G+QI+ L K +L D VA I++Y KC+ L A RVF
Sbjct: 383 ISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 442
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG- 296
++ D +W+A+I + Q GK E + LFV M S + P E TF +L A ++G
Sbjct: 443 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG--GSLGY 500
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK-------------TFDEMDE-H 342
G ++HS I+K G +S + V +++D YSKC ++EE+ K T +E+++ H
Sbjct: 501 GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMH 560
Query: 343 D------VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE 396
+ VSWN++I+G++ +A L M+ G P+ +TY+ +L+ +++ +
Sbjct: 561 NKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAG 620
Query: 397 WGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYA 456
GKQ H ++K S+V I S LVDMY+KCG L+D+R +F+ ++ V+WN M+ GYA
Sbjct: 621 LGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYA 680
Query: 457 QHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
HG G EA++++ M IKPN TFI +L AC H+GL+++G YF M RD+G+ P++
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQL 740
Query: 517 DHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV-LGRYAAEKIL 575
H +++V + G+ +RA E I+ P E + V+WR LL C H++ V + A +L
Sbjct: 741 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALL 800
Query: 576 STDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
DP+D+SA+ +LSNVYA+A MW++ + +R+ M+ LKK+ GCSW EL++++H F
Sbjct: 801 RLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVF 856
Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 163/545 (29%), Positives = 262/545 (48%), Gaps = 52/545 (9%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI SGF P N LL +Y A +FD+MP R+V+SW+ +I+G+S+ A
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKA 133
Query: 61 LNYFRLMVCCV-------------------------------LEPNYYTYVGAVSACASR 89
++F +M +E + T+ + C+
Sbjct: 134 NSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFL 193
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
D G +IHG + R G + + ++ L++MY K + VF E+NS+SW +++
Sbjct: 194 EDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAII 253
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ Q LK F +K +S+ ASVL +CA L L++G Q+H+ K
Sbjct: 254 AGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFA 313
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
D V +++YAKC+ + A +F N + + +++A+I GY+Q +A+ LF ++
Sbjct: 314 ADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRL 373
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
SSGL E++ S V A A VK G Q++ L IK S VAN +D Y KC+ L
Sbjct: 374 MSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQAL 433
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS 389
E+ + FDEM D VSWNA+IA H + E + L ML P+ +T+ +IL
Sbjct: 434 AEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC 493
Query: 390 SDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV------------- 436
+ ++ +G + H IVK G SN +G +L+DMY+KCG + +A K+
Sbjct: 494 TG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGT 552
Query: 437 ---FDHLSSKNL----VSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ + +K L VSWN+++ GY +A +++ M E I P+ T+ VL
Sbjct: 553 MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDT 612
Query: 490 CVHIG 494
C ++
Sbjct: 613 CANLA 617
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 208/437 (47%), Gaps = 31/437 (7%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL------- 138
CA +G GK+ H M SG + V NCL+ +Y SA VFD
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 139 ------------------------ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
R+ +SW S+LS Y Q GE + +++F+ + G+
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ A +L C+ L + +GMQIH +V + + D A L+++YAK ++ + RV
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET 294
F I + +WSA+I G Q A+ F +M S+ ++ VL + A + E
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 295 IGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH 354
G QLH+ +K F++ V LD Y+KC+ ++++ FD + + S+NA+I G+
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 355 LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNV 414
H +A+ L ++ G + + S + + + + G Q + +K +V
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +A +DMY KC L +A +VFD + ++ VSWN ++ + Q+G G E L ++ M +
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 477
Query: 475 KIKPNDNTFIGVLSACV 491
+I+P++ TF +L AC
Sbjct: 478 RIEPDEFTFGSILKACT 494
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/653 (36%), Positives = 364/653 (55%), Gaps = 6/653 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+ I NH+L MY K + DA+++FD MPERN++S++++I+G+SQ G A+ + M+
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV--SNCLINMYGKCGL 126
L P+ + + + ACAS D GK++H ++ + LE +SH+ N LI MY +
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK--LESSSHLIAQNALIAMYVRFNQ 218
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV-AISEFSCASVLG 185
+S A VF ++ ISW S+++ + Q G L GV +E+ S L
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
AC+ L G QIH L K L + L ++YA+C L+ A RVF I+ PD +
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
W+ +I G A G A EA+ +F +M SSG +P ++ +L A G Q+HS II
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEAI 364
K GF + V N++L Y+ C L F++ + D VSWN ++ L E +
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
L K ML P+ T N+L +I +++ G Q HC +K G I + L+DMY
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMY 518
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
AKCG L AR++FD + ++++VSW+T++VGYAQ G G EAL ++ M+ I+PN TF+
Sbjct: 519 AKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFV 578
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
GVL+AC H+GLVEEG + +M +HGISP +H + VV L A G+ A FI +
Sbjct: 579 GVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL 638
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
EP+ VVW+ LLS CKT ++ L + AAE IL DP +++AH++L +++A + W+ A +
Sbjct: 639 EPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALL 698
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
R MK+ +KK G SW E+++K+H F + D++ V++ + + D
Sbjct: 699 RSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLD 751
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 248/485 (51%), Gaps = 10/485 (2%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
TY+ + AC+S G++IH + S + ++ ++N +++MYGKCG L A+ VFD
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGM 197
ERN +S+ S+++ Y Q G+ ++++L + + +F+ S++ ACA ++ +G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 198 QIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLG 257
Q+H+ V K LI +Y + ++ ASRVF I + DL +WS++I G++QLG
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 258 KACEAIDLFVKMFSSGLM-PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
EA+ +M S G+ P+E F L A + + G Q+H L IK +
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
++ D Y++C L + + FD+++ D SWN +IAG + + EA+ + M G
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ + ++L + A+ G Q H I+K GF +++ + ++L+ MY C L +
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 437 F-DHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
F D ++ + VSWNT+L QH E L ++ +M ++ +P+ T +L CV I
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISS 488
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWR 552
++ G ++ G++P ++ ++A GQ RR ++ + + + V W
Sbjct: 489 LKLGSQVHCYSLKT-GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDV----VSWS 543
Query: 553 CLLSG 557
L+ G
Sbjct: 544 TLIVG 548
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 66/112 (58%)
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
L TY +++ S ++ G++ H I+ + ++ + ++ MY KCG L DAR+VFD
Sbjct: 67 LRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFD 126
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
+ +NLVS+ +++ GY+Q+G G EA+ +Y M + + P+ F ++ AC
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKAC 178
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/672 (34%), Positives = 373/672 (55%), Gaps = 18/672 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N L+ +Y K K+FD + ERN +SW++LIS E+AL FR M+
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 69 CCVLEPNYYTYVGAVSACASRGDARS---GKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
+EP+ +T V V+AC++ GK++H R G ELNS + N L+ MYGK G
Sbjct: 192 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLG 250
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
L+S++ + + R+ ++W ++LSS CQ + + L+ GV EF+ +SVL
Sbjct: 251 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 310
Query: 186 ACAVLGNLKVGMQIHSLVFK-CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC+ L L+ G ++H+ K +L+ + FV L+++Y C+++ RVF + +
Sbjct: 311 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 370
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W+A+I GY+Q EA+ LF+ M S+GL+ + T + V+ A +H
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
++K G FV NT++D YS+ ++ +++ F +M++ D+V+WN +I G++ S H+ +A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 364 IELLKDM------LFEGHC-----PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
+ LL M + +G PN T IL + + A+ GK+ H +K +
Sbjct: 491 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 550
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+V +GSALVDMYAKCG L +RKVFD + KN+++WN +++ Y HG G+EA+++ MM
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
+KPN+ TFI V +AC H G+V+EG F M D+G+ P DH A VV L G+
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRI 670
Query: 533 RRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNV 591
+ AY+ + P + NK W LL + H +L +G AA+ ++ +P S +++L+N+
Sbjct: 671 KEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI 730
Query: 592 YAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
Y+ A +WD+ +VR+ MKE+ ++K+ GCSW E +++H F + Q L + L
Sbjct: 731 YSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Query: 652 SVHLFDGGYVPD 663
+ GYVPD
Sbjct: 791 WERMRKEGYVPD 802
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/526 (27%), Positives = 255/526 (48%), Gaps = 27/526 (5%)
Query: 56 MPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVS 114
+ E L Y ++V + +P+ Y + + A A D GK+IH +Y+ G ++S V+
Sbjct: 78 LREAVLTYVDMIVLGI-KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVA 136
Query: 115 NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA 174
N L+N+Y KCG + VFD ERN +SW SL+SS C + L+ F V
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 175 ISEFSCASVLGACAVLG---NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
S F+ SV+ AC+ L L +G Q+H+ + E + F+ L+ +Y K KL +
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASS 255
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
+ + DL W+ ++ Q + EA++ +M G+ P E T S VL A + +
Sbjct: 256 KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315
Query: 292 KETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ G++LH+ +K G +FV + ++D Y C+ + + FD M + + WNA+
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375
Query: 351 IAGHLASCHYGEAIELLKDM-LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
IAG+ + H EA+ L M G N T + ++ A + H +VK G
Sbjct: 376 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG 435
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
D + + + L+DMY++ G+++ A ++F + ++LV+WNTM+ GY +AL +
Sbjct: 436 LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLH 495
Query: 470 MMQ--ENKI---------KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDH 518
MQ E K+ KPN T + +L +C + + +G I+++ ++ +
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN-LATDVAV 554
Query: 519 IASVVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+++V ++A C +R+ ++ I + N + W ++ H
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIP----QKNVITWNVIIMAYGMH 596
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 127/269 (47%), Gaps = 20/269 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G + N L+ MY + +I+ A ++F +M +R++++W+ +I+G+ E A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 61 LNYFRLMVC-----------CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL 109
L M L+PN T + + +CA+ GKEIH ++ L
Sbjct: 491 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 550
Query: 110 NSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSR 169
+ V + L++MY KCG L ++ VFD ++N I+W ++ +Y G + + +
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV---FKCALEFDKFVAMGLINLYAKCE 226
GV +E + SV AC+ G + G++I ++ + D + +++L +
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC--VVDLLGRAG 668
Query: 227 KLDLASRVFSNIQLPDLT---AWSALIGG 252
++ A ++ N+ D AWS+L+G
Sbjct: 669 RIKEAYQLM-NMMPRDFNKAGAWSSLLGA 696
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/673 (33%), Positives = 380/673 (56%), Gaps = 12/673 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMP---ERNVISWSALISGFSQIGMP 57
+I P+ + YN L+ +Y K A+ +F+ M +R+V+SWSA+++ + G
Sbjct: 88 LIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRE 147
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNC 116
A+ F + L PN Y Y + AC++ G+ G + ++G E + V
Sbjct: 148 LDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCS 207
Query: 117 LINMYGKC-GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI 175
LI+M+ K +A VFD E N ++W +++ Q G ++ FL SG
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE---KLDLAS 232
+F+ +SV ACA L NL +G Q+HS + L D V L+++YAKC +D
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCR 325
Query: 233 RVFSNIQLPDLTAWSALIGGYAQ-LGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFAD 290
+VF ++ + +W+ALI GY + A EAI+LF +M + G + P+ TFS A +
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ + G+Q+ K G +S + VAN+V+ + K + +E++ + F+ + E ++VS+N
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
+ G + ++ +A +LL ++ + +T++++L+ +++ +I G+Q H +VK G
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSM 470
N + +AL+ MY+KCG ++ A +VF+ + ++N++SW +M+ G+A+HG LE ++
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQ 565
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M E +KPN+ T++ +LSAC H+GLV EGW +FNSM DH I P+M+H A +V L G
Sbjct: 566 MIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAG 625
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSN 590
A+EFI + P + + +VWR L C+ H + LG+ AA KIL DP + +A+I LSN
Sbjct: 626 LLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSN 685
Query: 591 VYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQ 650
+YA A W+E+ ++R+ MKE++L K+ GCSW E+ +K+H F A +++ +++
Sbjct: 686 IYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDR 745
Query: 651 LSVHLFDGGYVPD 663
L + GYVPD
Sbjct: 746 LITEIKRCGYVPD 758
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 254/497 (51%), Gaps = 20/497 (4%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
T+ + +C D R GK +H R+ +E +S + N LI++Y K G + A+ VF+
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 138 L---ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
+R+ +SW ++++ Y G + +K+F+ + G+ +++ +V+ AC+ +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 195 VGMQIHSLVFKCA-LEFDKFVAMGLINLYAKCEK-LDLASRVFSNIQLPDLTAWSALIGG 252
VG + K E D V LI+++ K E + A +VF + ++ W+ +I
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Q+G EAI F+ M SG + T S V A A+++ G+QLHS I+ G
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--V 301
Query: 313 TFVANTVLDFYSKCEL---LEESLKTFDEMDEHDVVSWNALIAGHLASCHYG-EAIELLK 368
V +++D Y+KC +++ K FD M++H V+SW ALI G++ +C+ EAI L
Sbjct: 302 DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 369 DMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+M+ +GH PN +T+S+ ++ GKQ K G SN + ++++ M+ K
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
R+ DA++ F+ LS KNLVS+NT L G ++ +A ++ S + E ++ + TF +L
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ---TRRAYEFIKSSPI 544
S ++G + +G +S + G+S +++ +++ G R + F+++
Sbjct: 482 SGVANVGSIRKG-EQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR-- 538
Query: 545 EPNKVVWRCLLSGCKTH 561
N + W +++G H
Sbjct: 539 --NVISWTSMITGFAKH 553
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 200/405 (49%), Gaps = 20/405 (4%)
Query: 166 LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKC 225
L++R + + +S+L +C + ++G +H+ + + +E D + LI+LY+K
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 226 EKLDLASRVFSNIQL---PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFS 282
A VF ++ D+ +WSA++ Y G+ +AI +FV+ GL+P++ ++
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170
Query: 283 YVLGAFADVKETIGGRQLHSLIIKMG-FSSFTFVANTVLDFYSKCE-LLEESLKTFDEMD 340
V+ A ++ GR ++K G F S V +++D + K E E + K FD+M
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230
Query: 341 EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ 400
E +VV+W +I + EAI DM+ G + +T S++ + +++ + GKQ
Sbjct: 231 ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQ 290
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKC---GRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
H ++ G +V +LVDMYAKC G ++D RKVFD + +++SW ++ GY +
Sbjct: 291 LHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK 348
Query: 458 H-GLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPR 515
+ L EA+ ++S M+ + ++PN TF AC ++ G + G++
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK-RGLASN 407
Query: 516 MDHIASVVHLFACRGQ---TRRAYEFIKSSPIEPNKVVWRCLLSG 557
SV+ +F + +RA+E S E N V + L G
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFE----SLSEKNLVSYNTFLDG 448
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/638 (35%), Positives = 352/638 (55%), Gaps = 9/638 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ---IGMP 57
+I +G + N L+ Y K ++ A +F+ + ++V+SW++LI+G+SQ I
Sbjct: 40 IIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSS 99
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
+ FR M + PN YT G A +S + G++ H + + + +V L
Sbjct: 100 YTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSL 159
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAI 175
+ MY K GL+ VF ERN+ +W +++S Y G +K+F L K +
Sbjct: 160 VGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD 219
Query: 176 SEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAM--GLINLYAKCEKLDLASR 233
S++ +VL + A + +G QIH + K L FVA+ L+ +Y+KCE L+ A +
Sbjct: 220 SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLL--GFVALSNALVTMYSKCESLNEACK 277
Query: 234 VFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKE 293
+F + + WSA++ GY+Q G++ EA+ LF +MFS+G+ PSE T VL A +D+
Sbjct: 278 MFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICY 337
Query: 294 TIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAG 353
G+QLHS ++K+GF F ++D Y+K L ++ K FD + E DV W +LI+G
Sbjct: 338 LEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISG 397
Query: 354 HLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN 413
++ + EA+ L + M G PN T +++L S + +E GKQ H +K GF
Sbjct: 398 YVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE 457
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE 473
V IGSAL MY+KCG L D VF +K++VSWN M+ G + +G G EALE++ M
Sbjct: 458 VPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLA 517
Query: 474 NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTR 533
++P+D TF+ ++SAC H G VE GW YFN M G+ P++DH A +V L + GQ +
Sbjct: 518 EGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLK 577
Query: 534 RAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
A EFI+S+ I+ +WR LLS CK H LG YA EK+++ ++S ++ LS +Y
Sbjct: 578 EAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYT 637
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYF 631
+ +V K M+ + K+ GCSW EL+N+ H F
Sbjct: 638 ALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVF 675
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 256/492 (52%), Gaps = 9/492 (1%)
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
L P+ T + ++ + + + +G+ +HG++ R+G +N L+N Y KCG L+ A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 132 FVFDASLERNSISWVSLLSSYCQCG---EHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
+F+A + ++ +SW SL++ Y Q G +++F R + + ++ A + A +
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L + VG Q H+LV K + D +V L+ +Y K ++ +VF+ + + WS
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 249 LIGGYAQLGKACEAI---DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
++ GYA G+ EAI +LF++ G S+ F+ VL + A GRQ+H + I
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQIHCITI 248
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K G F ++N ++ YSKCE L E+ K FD + + ++W+A++ G+ + EA++
Sbjct: 249 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 308
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L M G P+ YT +LN SDI +E GKQ H ++K GF+ ++ +ALVDMYA
Sbjct: 309 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYA 368
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
K G L DARK FD L +++ W +++ GY Q+ EAL +Y M+ I PND T
Sbjct: 369 KAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMAS 428
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
VL AC + +E G I+ HG + +++ +++ G + +P
Sbjct: 429 VLKACSSLATLELGKQVHGHTIK-HGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP-N 486
Query: 546 PNKVVWRCLLSG 557
+ V W ++SG
Sbjct: 487 KDVVSWNAMISG 498
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 124/234 (52%), Gaps = 8/234 (3%)
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELL 329
F + L P T L + + + GR +H II+ G S+ AN +++FY+KC L
Sbjct: 6 FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 330 EESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA---IELLKDMLFEGHCPNLYTYSNIL 386
++ F+ + DVVSWN+LI G+ + + ++L ++M + PN YT + I
Sbjct: 66 AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
S + + G+Q H +VK ++ + ++LV MY K G + D KVF ++ +N
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY 185
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI-----GVLSACVHIGL 495
+W+TM+ GYA G EA++++++ K + +D+ ++ L+A +++GL
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGL 239
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/665 (31%), Positives = 369/665 (55%), Gaps = 1/665 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+GF + + L LMY + +A ++FDE+ + W+ L++ ++ G ++
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
F+ M+ +E + YT+ + +S G+++HG + +SG + V N L+ Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
+ SA+ VFD ER+ ISW S+++ Y G GL +F+ SG+ I + SV
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
CA + +G +HS+ K + L+++Y+KC LD A VF + +
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 362
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
+++++I GYA+ G A EA+ LF +M G+ P T + VL A + G+++H
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 422
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
I + FV+N ++D Y+KC ++E+ F EM D++SWN +I G+ +C+ EA
Sbjct: 423 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 482
Query: 364 IELLKDMLFEGH-CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVD 422
+ L +L E P+ T + +L + + A + G++ H I++ G+ S+ + ++LVD
Sbjct: 483 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 542
Query: 423 MYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNT 482
MYAKCG L A +FD ++SK+LVSW M+ GY HG G+EA+ +++ M++ I+ ++ +
Sbjct: 543 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 602
Query: 483 FIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSS 542
F+ +L AC H GLV+EGW +FN M + I P ++H A +V + A G +AY FI++
Sbjct: 603 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM 662
Query: 543 PIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETA 602
PI P+ +W LL GC+ H D+ L AEK+ +PE+T +++++N+YAEA W++
Sbjct: 663 PIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVK 722
Query: 603 KVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVP 662
++RK + ++ L+K+ GCSW E++ +++ F + + ++ + ++ + + GY P
Sbjct: 723 RLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSP 782
Query: 663 DPIYS 667
Y+
Sbjct: 783 LTKYA 787
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/526 (28%), Positives = 266/526 (50%), Gaps = 7/526 (1%)
Query: 38 ERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKE 97
+R+V + + F + G E A+ L V + + T + CA + GKE
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKL--LCVSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 98 IHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGE 157
+ + +G ++S++ + L MY CG L A VFD ++ W L++ + G+
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 158 HVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG 217
+ +F SGV + ++ + V + + L ++ G Q+H + K V
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235
Query: 218 LINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPS 277
L+ Y K +++D A +VF + D+ +W+++I GY G A + + +FV+M SG+
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 278 EVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFD 337
T V AD + GR +HS+ +K FS NT+LD YSKC L+ + F
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 338 EMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEW 397
EM + VVS+ ++IAG+ GEA++L ++M EG P++YT + +LN + ++
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 398 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
GK+ H I + ++ + +AL+DMYAKCG + +A VF + K+++SWNT++ GY++
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 458 HGLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRM 516
+ EAL +++ +++E + P++ T VL AC + ++G ++R+ S R
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR- 534
Query: 517 DHIA-SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
H+A S+V ++A G A+ + + V W +++G H
Sbjct: 535 -HVANSLVDMYAKCGALLLAH-MLFDDIASKDLVSWTVMIAGYGMH 578
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/465 (30%), Positives = 238/465 (51%), Gaps = 11/465 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF N L+ Y+K R++ A+K+FDEM ER+VISW+++I+G+ G+ E
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M+ +E + T V + CA G+ +H ++ N L++M
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 340
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L SA+ VF +R+ +S+ S+++ Y + G +K+F + G++ ++
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+VL CA L G ++H + + L FD FV+ L+++YAKC + A VFS +++
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG-LMPSEVTFSYVLGAFADVKETIGGRQ 299
D+ +W+ +IGGY++ A EA+ LF + P E T + VL A A + GR+
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H I++ G+ S VAN+++D Y+KC L + FD++ D+VSW +IAG+
Sbjct: 521 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 580
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQ-----THCCIVKPGFDSNV 414
EAI L M G + ++ ++L S ++ G + H C ++P +
Sbjct: 581 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 640
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
I VDM A+ G L A + +++ + W +L G H
Sbjct: 641 CI----VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/668 (30%), Positives = 360/668 (53%), Gaps = 1/668 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
G N + L+ Y+++ +I+ KLFD + +++ + W+ +++G+++ G + + F
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+M + PN T+ +S CAS+ G ++HG + SG++ + N L++MY KC
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
G A +F ++++W ++S Y Q G L F SGV + +S+L
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
+ + NL+ QIH + + ++ D F+ LI+ Y KC + +A +FS D+
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 407
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
++A+I GY G +++++F + + P+E+T +L + GR+LH I
Sbjct: 408 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI 467
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK GF + + V+D Y+KC + + + F+ + + D+VSWN++I S + AI
Sbjct: 468 IKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAI 527
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ + M G C + + S L+ +++P+ +GK H ++K S+V S L+DMY
Sbjct: 528 DIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMY 587
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTF 483
AKCG L A VF + KN+VSWN+++ HG +++L ++ M++++ I+P+ TF
Sbjct: 588 AKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITF 647
Query: 484 IGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSP 543
+ ++S+C H+G V+EG +F SM D+GI P+ +H A VV LF G+ AYE +KS P
Sbjct: 648 LEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMP 707
Query: 544 IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAK 603
P+ VW LL C+ HK++ L A+ K++ DP ++ ++++SN +A A W+ K
Sbjct: 708 FPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTK 767
Query: 604 VRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
VR +MKE+ ++K G SW E+ + H F + + ++ ++N L L GY+P
Sbjct: 768 VRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQ 827
Query: 664 PIYSSHFE 671
P H E
Sbjct: 828 PYLPLHPE 835
Score = 251 bits (642), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 155/566 (27%), Positives = 295/566 (52%), Gaps = 4/566 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER--NVISWSALISGFSQIGMPE 58
+I + + T +L MY +D K+F + R ++ W+++IS F + G+
Sbjct: 61 LIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLN 120
Query: 59 VALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
AL ++ M+C + P+ T+ V AC + + + + + G++ N V++ LI
Sbjct: 121 QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLI 180
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
Y + G + +FD L+++ + W +L+ Y +CG +K F + R ++ +
Sbjct: 181 KAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAV 240
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ VL CA + +G+Q+H LV ++F+ + L+++Y+KC + D AS++F +
Sbjct: 241 TFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM 300
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D W+ +I GY Q G E++ F +M SSG++P +TFS +L + + + +
Sbjct: 301 SRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCK 360
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H I++ S F+ + ++D Y KC + + F + + DVV + A+I+G+L +
Sbjct: 361 QIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNG 420
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
Y +++E+ + ++ PN T +IL + + A++ G++ H I+K GFD+ IG
Sbjct: 421 LYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGC 480
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
A++DMYAKCGR+N A ++F+ LS +++VSWN+M+ AQ A++I+ M + I
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY 540
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ + LSAC ++ G MI+ H ++ + ++++ ++A G + A
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNV 599
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDL 564
K+ E N V W +++ C H L
Sbjct: 600 FKTMK-EKNIVSWNSIIAACGNHGKL 624
Score = 199 bits (505), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 152/570 (26%), Positives = 266/570 (46%), Gaps = 42/570 (7%)
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS-AQFVFDASLERN 141
+ AC++ R GK++H + + + +S+ ++ MY CG S + + L R+
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS 101
Query: 142 SI-SWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA--ISEFSCASVLGACAVLGNLKVGMQ 198
SI W S++SS+ + G L + GV+ +S F C ++ AC L N K
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPC--LVKACVALKNFKGIDF 159
Query: 199 IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
+ V ++ ++FVA LI Y + K+D+ S++F + D W+ ++ GYA+ G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANT 318
I F M + P+ VTF VL A G QLH L++ G + N+
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 319 VLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPN 378
+L YSKC +++ K F M D V+WN +I+G++ S E++ +M+ G P+
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T+S++L S +E+ KQ HC I++ ++ + SAL+D Y KC ++ A+ +F
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+S ++V + M+ GY +GL ++LE++ + + KI PN+ T + +L + I L +
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV-IGILLALK 458
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI----KSSPIEPNKVVWRCL 554
+ I G R + +V+ ++A G+ AYE K + N ++ RC
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCA 518
Query: 555 LSGCKTHKDLVLGRY-------------AAEKILSTDPEDTSA---------HIMLSNVY 592
S + + + AA + P ++ H + S+VY
Sbjct: 519 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVY 578
Query: 593 AEANMWDETAK---------VRKIMKEKSL 613
+E+ + D AK V K MKEK++
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMKEKNI 608
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 180/378 (47%), Gaps = 6/378 (1%)
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL-- 240
+L AC+ L+ G Q+H+ + ++ D + ++ +YA C ++F + L
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ W+++I + + G +A+ + KM G+ P TF ++ A +K G L
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
+ +G FVA++++ Y + ++ K FD + + D V WN ++ G+
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
I+ M + PN T+ +L++ + I+ G Q H +V G D I ++L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+ MY+KCGR +DA K+F +S + V+WN M+ GY Q GL E+L + M + + P+
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVH-LFACRGQTRRAYEFI 539
TF +L + +E ++R H IS + ++++ F CRG + F
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMR-HSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 540 KSSPIEPNKVVWRCLLSG 557
+ + ++ VV+ ++SG
Sbjct: 400 QCNSVD--VVVFTAMISG 415
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI +V + + L+ MY K + A +F M E+N++SW+++I+ G + +
Sbjct: 568 MIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDS 627
Query: 61 LNYFRLMV-CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-----GLELNSHVS 114
L F MV + P+ T++ +S+C GD G R +RS G++
Sbjct: 628 LCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGV----RFFRSMTEDYGIQPQQEHY 683
Query: 115 NCLINMYGKCGLLSSA 130
C+++++G+ G L+ A
Sbjct: 684 ACVVDLFGRAGRLTEA 699
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 110/264 (41%), Gaps = 40/264 (15%)
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
S +L S+ + GKQ H ++ + ++ MYA CG +D K+F L
Sbjct: 39 SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 98
Query: 443 K--NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGW 500
+ ++ WN+++ + ++GL +AL Y M + P+ +TF ++ ACV + +G
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF-KGI 157
Query: 501 HYFNSMIRDHGISPRMDHIASVVHLFACRGQTR--------------------------- 533
+ + + G+ +S++ + G+
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 534 -------RAYEFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPEDTSA 584
+ + ++ I PN V + C+LS C K DL + + + D E +
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 585 HIMLSNVYAEANMWDETAKVRKIM 608
+ +LS +Y++ +D+ +K+ ++M
Sbjct: 278 NSLLS-MYSKCGRFDDASKLFRMM 300
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/648 (30%), Positives = 353/648 (54%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ ++ ++ +++A ++F+ + + + + ++ GF+++ + AL +F M +EP
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
Y + + C + R GKEIHG + +SG L+ L NMY KC ++ A+ VFD
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
ER+ +SW ++++ Y Q G L++ + + S + SVL A + L + V
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G +IH + + ++ L+++YAKC L+ A ++F + ++ +W+++I Y Q
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
EA+ +F KM G+ P++V+ L A AD+ + GR +H L +++G V
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
N+++ Y KC+ ++ + F ++ +VSWNA+I G + +A+ M
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARK 435
P+ +TY +++ +++ K H +++ D NV + +ALVDMYAKCG + AR
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 436 VFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGL 495
+FD +S +++ +WN M+ GY HG G+ ALE++ MQ+ IKPN TF+ V+SAC H GL
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 496 VEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
VE G F M ++ I MDH ++V L G+ A++FI P++P V+ +L
Sbjct: 555 VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML 614
Query: 556 SGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKK 615
C+ HK++ AAE++ +P+D H++L+N+Y A+MW++ +VR M + L+K
Sbjct: 615 GACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRK 674
Query: 616 DTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
GCS E++N++H F + A ++ + +L H+ + GYVPD
Sbjct: 675 TPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPD 722
Score = 250 bits (638), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 249/459 (54%), Gaps = 3/459 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF ++ L MY K ++N+A+K+FD MPER+++SW+ +++G+SQ GM +A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L + M L+P++ T V + A ++ GKEIHG RSG + ++S L++M
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L +A+ +FD LERN +SW S++ +Y Q + IF GV ++ S
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
L ACA LG+L+ G IH L + L+ + V LI++Y KC+++D A+ +F +Q
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
L +W+A+I G+AQ G+ +A++ F +M S + P T+ V+ A A++ T + +
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H ++++ FV ++D Y+KC + + FD M E V +WNA+I G+
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--S 418
A+EL ++M PN T+ ++++ S +E G + ++K + + +
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYG 579
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
A+VD+ + GRLN+A + K V+ ++G Q
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 250/492 (50%), Gaps = 7/492 (1%)
Query: 72 LEPNYYTYVGAV--SACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSS 129
+ N Y + A+ C+S + R +I ++++GL L++++ + G +
Sbjct: 31 IPANVYEHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDE 87
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A VF+ + ++ + ++L + + + L+ F+ R V ++ +L C
Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGD 147
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
L+VG +IH L+ K D F GL N+YAKC +++ A +VF + DL +W+ +
Sbjct: 148 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTI 207
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
+ GY+Q G A A+++ M L PS +T VL A + ++ G+++H ++ GF
Sbjct: 208 VAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF 267
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
S ++ ++D Y+KC LE + + FD M E +VVSWN++I ++ + + EA+ + +
Sbjct: 268 DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQK 327
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
ML EG P + L+ +D+ +E G+ H V+ G D NV + ++L+ MY KC
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKE 387
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
++ A +F L S+ LVSWN M++G+AQ+G +AL +S M+ +KP+ T++ V++A
Sbjct: 388 VDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
+ + + + ++ + + ++V ++A G A I E +
Sbjct: 448 IAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVT 505
Query: 550 VWRCLLSGCKTH 561
W ++ G TH
Sbjct: 506 TWNAMIDGYGTH 517
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/619 (33%), Positives = 340/619 (54%), Gaps = 4/619 (0%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIG-MPEVALNYFRLMVCCVL 72
N L M+V+F + DA +F +M ERN+ SW+ L+ G+++ G E Y R++ +
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
+P+ YT+ + C D GKE+H + R G EL+ V N LI MY KCG + SA+
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 133 VFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGN 192
+FD R+ ISW +++S Y + G GL++F R V + SV+ AC +LG+
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
++G IH+ V D V L +Y A ++FS ++ D+ +W+ +I G
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y +AID + M + P E+T + VL A A + + G +LH L IK S+
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
VAN +++ YSKC+ ++++L F + +V+SW ++IAG + EA+ L+ M
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 492
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
PN T + L + I A+ GK+ H +++ G + + +AL+DMY +CGR+N
Sbjct: 493 TLQ-PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A F+ K++ SWN +L GY++ G G +E++ M +++++P++ TFI +L C
Sbjct: 552 AWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
+V +G YF+ M D+G++P + H A VV L G+ + A++FI+ P+ P+ VW
Sbjct: 611 SQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWG 669
Query: 553 CLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKS 612
LL+ C+ H + LG +A+ I D + +I+L N+YA+ W E AKVR++MKE
Sbjct: 670 ALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENG 729
Query: 613 LKKDTGCSWTELQNKMHYF 631
L D GCSW E++ K+H F
Sbjct: 730 LTVDAGCSWVEVKGKVHAF 748
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/536 (26%), Positives = 248/536 (46%), Gaps = 37/536 (6%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ ++ N L+ MYVK + A+ LFD MP R++ISW+A+ISG+ + GM
Sbjct: 222 VVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEG 281
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M ++P+ T +SAC GD R G++IH + +G ++ V N L M
Sbjct: 282 LELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQM 341
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y G A+ +F ++ +SW +++S Y + + + + V E +
Sbjct: 342 YLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITV 401
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+VL ACA LG+L G+++H L K L VA LIN+Y+KC+ +D A +F NI
Sbjct: 402 AAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPR 461
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
++ +W+++I G + EA+ +F++ L P+ +T + L A A + + G+++
Sbjct: 462 KNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEI 520
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H+ +++ G F+ N +LD Y +C + + F+ + DV SWN L+ G+
Sbjct: 521 HAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQG 579
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
+EL M+ P+ T+ ++L S + G + G N+ + +
Sbjct: 580 SMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACV 639
Query: 421 VDMYAKCGRLNDARKVFD---------------------------HLSSKNLVSWNTMLV 453
VD+ + G L +A K LS++++ + V
Sbjct: 640 VDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSV 699
Query: 454 G--------YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
G YA G RE ++ MM+EN + + + VH L ++ +H
Sbjct: 700 GYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYH 755
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 225/520 (43%), Gaps = 46/520 (8%)
Query: 78 TYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDAS 137
+V V C + G +++ S L + N + M+ + G L A +VF
Sbjct: 96 VFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKM 155
Query: 138 LERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVLGNLKVG 196
ERN SW L+ Y + G + ++ + GV ++ VL C + +L G
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
++H V + E D V LI +Y KC + A +F + D+ +W+A+I GY +
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
G E ++LF M + P +T + V+ A + + GR +H+ +I GF+ V
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
N++ Y E+ K F M+ D+VSW +I+G+ + +AI+ + M +
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ T + +L+ + + ++ G + H +K S V++ + L++MY+KC ++ A +
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND---------------- 480
F ++ KN++SW +++ G + EAL I+ + ++PN
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGAL 514
Query: 481 -----------NTFIG--------VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
T +G +L V G + W FNS +D +
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKD------VTSWNI 568
Query: 522 VVHLFACRGQTRRAYEFIK---SSPIEPNKVVWRCLLSGC 558
++ ++ RGQ E S + P+++ + LL GC
Sbjct: 569 LLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 175/352 (49%), Gaps = 1/352 (0%)
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
L C G+ +K+ ++ VA+ E +++ C + G +++S+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
+ + ++ + L A VF + +L +W+ L+GGYA+ G EA+ L+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 269 M-FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE 327
M + G+ P TF VL + + G+++H +++ G+ V N ++ Y KC
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 328 LLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILN 387
++ + FD M D++SWNA+I+G+ + E +EL M P+L T +++++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
+ G+ H ++ GF ++ + ++L MY G +A K+F + K++VS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
W TM+ GY + L +A++ Y MM ++ +KP++ T VLSAC +G ++ G
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 124/287 (43%), Gaps = 51/287 (17%)
Query: 414 VVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SMMQ 472
V +G+A + M+ + G L DA VF +S +NL SWN ++ GYA+ G EA+ +Y M+
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 473 ENKIKPNDNTFIGVLSAC-----------VHIGLVEEGWHY----FNSMIRDH------- 510
+KP+ TF VL C VH+ +V G+ N++I +
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVK 248
Query: 511 ------GISPRMDHIA--SVVHLFACRGQTRRAYEF---IKSSPIEPNKVVWRCLLSGCK 559
PR D I+ +++ + G E ++ ++P+ + ++S C+
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 560 THKDLVLGRYAAEKILSTD-PEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTG 618
D LGR +++T D S L+ +Y A W E K+ M+ K +
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI----- 363
Query: 619 CSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPI 665
SWT + + Y F + ID + +M+Q SV PD I
Sbjct: 364 VSWTTMISGYEY----NFLPDKAIDTYRMMDQDSVK-------PDEI 399
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/658 (33%), Positives = 352/658 (53%), Gaps = 10/658 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFS---QIGMPEVALNYFR 65
++ N LL YVK DA LFDEMPERN +S+ L G++ IG+ Y R
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGL------YSR 136
Query: 66 LMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG 125
L E N + + + S A +H + + G + N+ V LIN Y CG
Sbjct: 137 LHREG-HELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCG 195
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLG 185
+ SA+ VF+ L ++ + W ++S Y + G LK+ R +G + ++ + L
Sbjct: 196 SVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALK 255
Query: 186 ACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA 245
A LG +H + K D V +GL+ LY + + A +VF+ + D+
Sbjct: 256 ASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVP 315
Query: 246 WSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
WS +I + Q G EA+DLF++M + ++P+E T S +L A K + G QLH L++
Sbjct: 316 WSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV 375
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K+GF +V+N ++D Y+KCE ++ ++K F E+ + VSWN +I G+ G+A
Sbjct: 376 KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFS 435
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
+ ++ L T+S+ L + + +++ G Q H +K V + ++L+DMYA
Sbjct: 436 MFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYA 495
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KCG + A+ VF+ + + ++ SWN ++ GY+ HGLGR+AL I +M++ KPN TF+G
Sbjct: 496 KCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLG 555
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
VLS C + GL+++G F SMIRDHGI P ++H +V L GQ +A + I+ P E
Sbjct: 556 VLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYE 615
Query: 546 PNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVR 605
P+ ++WR +LS + R +AE+IL +P+D + ++++SN+YA A W A +R
Sbjct: 616 PSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIR 675
Query: 606 KIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
K MKE +KK+ G SW E Q +HYFS ++ ++ L++ GYVPD
Sbjct: 676 KSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPD 733
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 250/483 (51%), Gaps = 6/483 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ N L+ Y ++ A+ +F+ + ++++ W+ ++S + + G E +
Sbjct: 172 IVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDS 231
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L M PN YT+ A+ A G K +HG++ ++ L+ V L+ +
Sbjct: 232 LKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQL 291
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G +S A VF+ + + + W +++ +CQ G + +F+ R++ V +EF+
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTL 351
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+S+L CA+ +G Q+H LV K + D +V+ LI++YAKCEK+D A ++F+ +
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSS 411
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ +W+ +I GY LG+ +A +F + + + +EVTFS LGA A + G Q+
Sbjct: 412 KNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQV 471
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L IK + V+N+++D Y+KC ++ + F+EM+ DV SWNALI+G+
Sbjct: 472 HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLG 531
Query: 361 GEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGS 418
+A+ +L D++ + C PN T+ +L+ S+ I+ G++ +++ G + + +
Sbjct: 532 RQALRIL-DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYT 590
Query: 419 ALVDMYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+V + + G+L+ A K+ + + +++ W ML A E S + KI
Sbjct: 591 CMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAML--SASMNQNNEEFARRSAEEILKIN 648
Query: 478 PND 480
P D
Sbjct: 649 PKD 651
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 149/504 (29%), Positives = 243/504 (48%), Gaps = 29/504 (5%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
+ Y + C + D S K IH + + G L+ +N L+N Y K G A +FD
Sbjct: 50 HAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDE 109
Query: 137 SLERNSISWVSLLSSY-CQCGEHVHGLKIFLLSR--KSGVAISEFSCASVLGACAVLGNL 193
ERN++S+V+L Y CQ I L SR + G ++ S L L
Sbjct: 110 MPERNNVSFVTLAQGYACQ-------DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
++ +HS + K + + FV LIN Y+ C +D A VF I D+ W+ ++ Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G +++ L M +G MP+ TF L A + + +H I+K +
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V +L Y++ + ++ K F+EM ++DVV W+ +IA + EA++L M
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
PN +T S+ILN + G+Q H +VK GFD ++ + +AL+D+YAKC +++ A
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
K+F LSSKN VSWNT++VGY G G +A ++ N++ + TF L AC +
Sbjct: 403 VKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASL 462
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIA------SVVHLFACRGQTRRAYEFIKSSPIEPN 547
++ G ++ HG++ + ++ S++ ++A G + A + +E
Sbjct: 463 ASMDLG-------VQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVF--NEMETI 513
Query: 548 KVV-WRCLLSGCKTHKDLVLGRYA 570
V W L+SG TH LGR A
Sbjct: 514 DVASWNALISGYSTHG---LGRQA 534
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/625 (33%), Positives = 346/625 (55%), Gaps = 10/625 (1%)
Query: 19 MYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYT 78
MY K + A++LFD MPERN+IS+++LISG++Q+G E A+ F L+ + +T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
Y GA+ C R D G+ +HG + +GL + N LI+MY KCG L A +FD
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 139 ERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV---LGNLKV 195
ER+ +SW SL+S Y + G L + + G+ ++ ++ SVL AC + G ++
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
GM IH K +EFD V L+++YAK L A ++FS + ++ ++A+I G+ Q
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 256 LGK-----ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
+ + + EA LF+ M GL PS TFS VL A + K GRQ+H+LI K F
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S F+ + +++ Y+ E+ ++ F + D+ SW ++I H+ + A +L +
Sbjct: 391 SDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ- 449
Query: 371 LFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
LF H P YT S +++ +D A+ G+Q +K G D+ + ++ + MYAK G
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGN 509
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ A +VF + + ++ +++ M+ AQHG EAL I+ M+ + IKPN F+GVL A
Sbjct: 510 MPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C H GLV +G YF M D+ I+P H +V L G+ A I SS + + V
Sbjct: 570 CCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV 629
Query: 550 VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMK 609
WR LLS C+ +KD V+G+ AE+++ +PE + ++++L N+Y ++ + +VR++M+
Sbjct: 630 TWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMR 689
Query: 610 EKSLKKDTGCSWTELQNKMHYFSTS 634
++ +KK+ SW + N+ H F+ +
Sbjct: 690 DRGVKKEPALSWIVIGNQTHSFAVA 714
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 150/488 (30%), Positives = 240/488 (49%), Gaps = 20/488 (4%)
Query: 87 ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWV 146
A G GK HG M +S L ++ N L+NMY KC L A+ +FD ERN IS+
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFN 117
Query: 147 SLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKC 206
SL+S Y Q G + +++FL +R++ + + +F+ A LG C +L +G +H LV
Sbjct: 118 SLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVN 177
Query: 207 ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLF 266
L F+ LI++Y+KC KLD A +F D +W++LI GY ++G A E ++L
Sbjct: 178 GLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLL 237
Query: 267 VKMFSSGLMPSEVTFSYVLGAFA-DVKETI--GGRQLHSLIIKMGFSSFTFVANTVLDFY 323
KM GL + VL A ++ E G +H K+G V +LD Y
Sbjct: 238 AKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMY 297
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY-----GEAIELLKDMLFEGHCPN 378
+K L+E++K F M +VV++NA+I+G L EA +L DM G P+
Sbjct: 298 AKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPS 357
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T+S +L S +E+G+Q H I K F S+ IGSAL+++YA G D + F
Sbjct: 358 PSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFA 417
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
S +++ SW +M+ + Q+ A +++ + + I+P + T ++SAC +
Sbjct: 418 STSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSS 477
Query: 499 GWHYFNSMIRDHGISPRMDHIASV----VHLFACRGQTRRAYE-FIKSSPIEPNKVVWRC 553
G I+ + I +D SV + ++A G A + FI+ P+ +
Sbjct: 478 GEQ-----IQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ--NPDVATYSA 530
Query: 554 LLSGCKTH 561
++S H
Sbjct: 531 MISSLAQH 538
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y + ++ ++ GK H ++K + + + + L++MY KC L AR++FD +
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWH 501
+N++S+N+++ GY Q G +A+E++ +E +K + T+ G L C ++ G
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-E 168
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+ ++ +G+S ++ I ++ +++ G+ +A E ++V W L+SG
Sbjct: 169 LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISG 223
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/636 (31%), Positives = 355/636 (55%), Gaps = 6/636 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G N+ + L+ MY K ++ A K+F+ + E+N + W+A+I G++ G +
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVM 413
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + +T+ +S CA+ D G + H + + L N V N L++MY
Sbjct: 414 ELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMY 473
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC- 180
KCG L A+ +F+ +R++++W +++ SY Q +F G+ +S+ +C
Sbjct: 474 AKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGI-VSDGACL 532
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS L AC + L G Q+H L KC L+ D LI++Y+KC + A +VFS++
Sbjct: 533 ASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPE 592
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ + +ALI GY+Q EA+ LF +M + G+ PSE+TF+ ++ A + G Q
Sbjct: 593 WSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQF 651
Query: 301 HSLIIKMGFSS-FTFVANTVLDFYSKCELLEESLKTFDEMDE-HDVVSWNALIAGHLASC 358
H I K GFSS ++ ++L Y + E+ F E+ +V W +++GH +
Sbjct: 652 HGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
Y EA++ K+M +G P+ T+ +L + S + ++ G+ H I D + + +
Sbjct: 712 FYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN 771
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
L+DMYAKCG + + +VFD + + N+VSWN+++ GYA++G +AL+I+ M+++ I
Sbjct: 772 TLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIM 831
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P++ TF+GVL+AC H G V +G F MI +GI R+DH+A +V L G + A +
Sbjct: 832 PDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADD 891
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FI++ ++P+ +W LL C+ H D + G +AEK++ +P+++SA+++LSN+YA
Sbjct: 892 FIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGC 951
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
W++ +RK+M+++ +KK G SW +++ + H F+
Sbjct: 952 WEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAA 987
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/561 (29%), Positives = 289/561 (51%), Gaps = 8/561 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M G P+ + + ++ Y++ ++ DA+ LF EM +V++W+ +ISG + G VA
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ YF M ++ T +SA + G +H + GL N +V + L++M
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC + +A VF+A E+N + W +++ Y GE +++F+ + SG I +F+
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L CA +L++G Q HS++ K L + FV L+++YAKC L+ A ++F +
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D W+ +IG Y Q EA DLF +M G++ + L A V G+Q+
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L +K G ++++D YSKC +++++ K F + E VVS NALIAG+ + +
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNL 610
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSN-VVIGSA 419
EA+ L ++ML G P+ T++ I+ ++ G Q H I K GF S +G +
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Query: 420 LVDMYAKCGRLNDARKVFDHLSS-KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
L+ MY + +A +F LSS K++V W M+ G++Q+G EAL+ Y M+ + + P
Sbjct: 671 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS--VVHLFACRGQTRRAY 536
+ TF+ VL C + + EG +S+I ++ +D + S ++ ++A G + +
Sbjct: 731 DQATFVTVLRVCSVLSSLREG-RAIHSLI--FHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 537 EFIKSSPIEPNKVVWRCLLSG 557
+ N V W L++G
Sbjct: 788 QVFDEMRRRSNVVSWNSLING 808
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/560 (29%), Positives = 284/560 (50%), Gaps = 42/560 (7%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
MI G N L+ MY K RI+DA+++F+ + + N + W+ L SG+ + G+PE A
Sbjct: 186 MIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEA 245
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ F M P++ +V +IN
Sbjct: 246 VLVFERMRDEGHRPDHLAFV-----------------------------------TVINT 270
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + G L A+ +F + ++W ++S + + G ++ F RKS V + +
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
SVL A ++ NL +G+ +H+ K L + +V L+++Y+KCEK++ A++VF ++
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+ W+A+I GYA G++ + ++LF+ M SSG + TF+ +L A + G Q
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
HS+IIK + FV N ++D Y+KC LE++ + F+ M + D V+WN +I ++ +
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSAL 420
EA +L K M G + ++ L + + + GKQ HC VK G D ++ GS+L
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL 570
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPND 480
+DMY+KCG + DARKVF L ++VS N ++ GY+Q+ L EA+ ++ M + P++
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSE 629
Query: 481 NTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA-SVVHLFA-CRGQTRRAYEF 538
TF ++ AC + G F+ I G S +++ S++ ++ RG T F
Sbjct: 630 ITFATIVEACHKPESLTLGTQ-FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 539 IK-SSPIEPNKVVWRCLLSG 557
+ SSP + V+W ++SG
Sbjct: 689 SELSSP--KSIVLWTGMMSG 706
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 244/486 (50%), Gaps = 36/486 (7%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N ++ +Y K ++++ A+K FD + E++V +W++++S +S IG P L F + +
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 74 PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFV 133
PN +T+ +S CA + G++IH M + GLE NS+ L++MY KC +S A+ V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F+ ++ N++ W L S Y + G + +F R G
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG--------------------- 256
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
D + +IN Y + KL A +F + PD+ AW+ +I G+
Sbjct: 257 --------------HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGH 302
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
+ G AI+ F M S + + T VL A V G +H+ IK+G +S
Sbjct: 303 GKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 362
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+V ++++ YSKCE +E + K F+ ++E + V WNA+I G+ + + +EL DM
Sbjct: 363 YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS 422
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
G+ + +T++++L+ + +E G Q H I+K N+ +G+ALVDMYAKCG L DA
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 482
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
R++F+ + ++ V+WNT++ Y Q EA +++ M I + L AC H+
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542
Query: 494 GLVEEG 499
+ +G
Sbjct: 543 HGLYQG 548
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 221/463 (47%), Gaps = 38/463 (8%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
R GK +H + G++ + N ++++Y KC +S A+ FD LE++ +W S+LS Y
Sbjct: 77 RIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDF-LEKDVTAWNSMLSMY 135
Query: 153 CQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDK 212
G+ L+ F+ ++ + ++F+ + VL CA N++ G QIH + K LE +
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 213 FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSS 272
+ L+++YAKC+++ A RVF I P+ W+ L GY + G EA+ +F +M
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 273 GLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEES 332
G P + F TV++ Y + L+++
Sbjct: 256 GHRPDHLAFV-----------------------------------TVINTYIRLGKLKDA 280
Query: 333 LKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 392
F EM DVV+WN +I+GH AIE +M T ++L+ +
Sbjct: 281 RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 393 PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTML 452
++ G H +K G SN+ +GS+LV MY+KC ++ A KVF+ L KN V WN M+
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGI 512
GYA +G + +E++ M+ + +D TF +LS C +E G F+S+I +
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKL 459
Query: 513 SPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
+ + ++V ++A G A + + + + V W ++
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTII 501
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 179/365 (49%), Gaps = 38/365 (10%)
Query: 193 LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGG 252
L++G +HS ++ + + +++LYAKC ++ A + F ++ D+TAW++++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 253 YAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF 312
Y+ +GK + + FV +F + + P++ TFS VL A GRQ+H +IKMG
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
++ ++D Y+KC+ + ++ + F+ + + + V W L +G++ + EA+ + + M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
EGH P+ + ++N Y + G+L D
Sbjct: 255 EGHRPDHLAFVTVINT-----------------------------------YIRLGKLKD 279
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
AR +F +SS ++V+WN M+ G+ + G A+E + M+++ +K +T VLSA
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
+ ++ G I+ G++ + +S+V +++ + + A + + E N V W
Sbjct: 340 VANLDLGLVVHAEAIK-LGLASNIYVGSSLVSMYS-KCEKMEAAAKVFEALEEKNDVFWN 397
Query: 553 CLLSG 557
++ G
Sbjct: 398 AMIRG 402
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 161/320 (50%), Gaps = 10/320 (3%)
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+ +HS + +G S + N ++D Y+KC + + K FD + E DV +WN++++ + +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
G+ + + PN +T+S +L+ + +E+G+Q HC ++K G + N
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
G ALVDMYAKC R++DAR+VF+ + N V W + GY + GL EA+ ++ M++
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
+P+ F+ V++ + +G +++ F M SP + ++ RG A
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEM-----SSPDVVAWNVMISGHGKRGCETVAI 312
Query: 537 EF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYA-AEKILSTDPEDTSAHIMLSNVY 592
E+ ++ S ++ + +LS +L LG AE I + L ++Y
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 593 AEANMWDETAKVRKIMKEKS 612
++ + AKV + ++EK+
Sbjct: 373 SKCEKMEAAAKVFEALEEKN 392
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 89/167 (53%), Gaps = 9/167 (5%)
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
A+ GK H + G DS +G+A+VD+YAKC +++ A K FD L K++ +WN+ML
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
Y+ G + L + + EN+I PN TF VLS C VE G SMI+ G+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLE 192
Query: 514 PRMDHIASVVHLFA-CR--GQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
++V ++A C RR +E+I ++PN V W CL SG
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI----VDPNTVCWTCLFSG 235
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/610 (33%), Positives = 333/610 (54%), Gaps = 45/610 (7%)
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
+ A S C S D G+++ +M + N + N ++ K G L A +F + E
Sbjct: 62 IDAYSKCGSLED---GRQVFDKMPQR----NIYTWNSVVTGLTKLGFLDEADSLFRSMPE 114
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQI 199
R+ +W S++S + Q L F + K G ++E+S ASVL AC+ L ++ G+Q+
Sbjct: 115 RDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQV 174
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
HSL+ K D ++ L+++Y+KC ++ A RVF + ++ +W++LI + Q G A
Sbjct: 175 HSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPA 234
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG-FSSFTFVANT 318
EA+D+F M S + P EVT + V+ A A + G+++H ++K + ++N
Sbjct: 235 VEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNA 294
Query: 319 VLDFYSKCELLEESLKTFD-------------------------------EMDEHDVVSW 347
+D Y+KC ++E+ FD +M E +VVSW
Sbjct: 295 FVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSW 354
Query: 348 NALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVK 407
NALIAG+ + EA+ L + E CP Y+++NIL +D+ + G Q H ++K
Sbjct: 355 NALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLK 414
Query: 408 PGF------DSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
GF + ++ +G++L+DMY KCG + + VF + ++ VSWN M++G+AQ+G G
Sbjct: 415 HGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYG 474
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
EALE++ M E+ KP+ T IGVLSAC H G VEEG HYF+SM RD G++P DH
Sbjct: 475 NEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTC 534
Query: 522 VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPED 581
+V L G A I+ P++P+ V+W LL+ CK H+++ LG+Y AEK+L +P +
Sbjct: 535 MVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSN 594
Query: 582 TSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQG 641
+ +++LSN+YAE W++ VRK M+++ + K GCSW ++Q H F + +
Sbjct: 595 SGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRK 654
Query: 642 IDLHEVMNQL 651
+H +++ L
Sbjct: 655 KQIHSLLDIL 664
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 246/494 (49%), Gaps = 48/494 (9%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
N+ T+N ++ K +++A LF MPER+ +W++++SGF+Q E AL YF +M
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
N Y++ +SAC+ D G ++H + +S + ++ + L++MY KCG ++
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
AQ VFD +RN +SW SL++ + Q G V L +F + +S V E + ASV+ ACA
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264
Query: 189 VLGNLKVGMQIHSLVFKC-ALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTA-- 245
L +KVG ++H V K L D ++ +++YAKC ++ A +F ++ + ++ A
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 246 -----------------------------WSALIGGYAQLGKACEAIDLFVKMFSSGLMP 276
W+ALI GY Q G+ EA+ LF + + P
Sbjct: 325 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCP 384
Query: 277 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF------SSFTFVANTVLDFYSKCELLE 330
+ +F+ +L A AD+ E G Q H ++K GF FV N+++D Y KC +E
Sbjct: 385 THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVE 444
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
E F +M E D VSWNA+I G + + EA+EL ++ML G P+ T +L+
Sbjct: 445 EGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
Query: 391 DIPAIEWGKQTHCCI-----VKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK-N 444
+E G+ + V P D + +VD+ + G L +A+ + + + + +
Sbjct: 505 HAGFVEEGRHYFSSMTRDFGVAPLRDHY----TCMVDLLGRAGFLEEAKSMIEEMPMQPD 560
Query: 445 LVSWNTMLVGYAQH 458
V W ++L H
Sbjct: 561 SVIWGSLLAACKVH 574
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 196/390 (50%), Gaps = 40/390 (10%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S F +V + L+ MY K +NDAQ++FDEM +RNV+SW++LI+ F Q G AL+
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV-SNCLINMYG 122
F++M+ +EP+ T +SACAS + G+E+HGR+ ++ N + SN ++MY
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYA 300
Query: 123 KCGLLSSAQFVFDA-------------------------------SLERNSISWVSLLSS 151
KC + A+F+FD+ ERN +SW +L++
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF- 210
Y Q GE+ L +F L ++ V + +S A++L ACA L L +GMQ H V K +F
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQ 420
Query: 211 -----DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
D FV LI++Y KC ++ VF + D +W+A+I G+AQ G EA++L
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALEL 480
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK-MGFSSFTFVANTVLDFYS 324
F +M SG P +T VL A GR S + + G + ++D
Sbjct: 481 FREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLG 540
Query: 325 KCELLEESLKTFDEMD-EHDVVSWNALIAG 353
+ LEE+ +EM + D V W +L+A
Sbjct: 541 RAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 152/291 (52%), Gaps = 32/291 (10%)
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
R +H+ +IK GFS+ F+ N ++D YSKC LE+ + FD+M + ++ +WN+++ G
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 358 CHYGEAIELLKDMLFEGHCP-------------------------------NLYTYSNIL 386
EA L + M C N Y+++++L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+ S + + G Q H I K F S+V IGSALVDMY+KCG +NDA++VFD + +N+V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
SWN+++ + Q+G EAL+++ MM E++++P++ T V+SAC + ++ G +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+++ + + + V ++A + + A S PI N + ++SG
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISG 329
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 121/300 (40%), Gaps = 77/300 (25%)
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNL-- 445
I S + AI + + H ++K GF + + I + L+D Y+KCG L D R+VFD + +N+
Sbjct: 30 IKSKLSAI-YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYT 88
Query: 446 -----------------------------VSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
+WN+M+ G+AQH EAL ++MM +
Sbjct: 89 WNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGF 148
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWH--------------YFNSMIRD-----------HG 511
N+ +F VLSAC + + +G Y S + D
Sbjct: 149 VLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQR 208
Query: 512 ISPRM--DHIASVVHLFACRGQTRRA------YEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
+ M ++ S L C Q A ++ + S +EP++V ++S C +
Sbjct: 209 VFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA 268
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYA----------EANMWDETAKVRKIMKEKSL 613
+ +G+ +++ D I+LSN + EA ++ +R ++ E S+
Sbjct: 269 IKVGQEVHGRVVKNDK--LRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSM 326
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/576 (33%), Positives = 324/576 (56%), Gaps = 3/576 (0%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
K+IH R+ GL+ + + LI+ G ++ A+ VFD W +++ Y +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
L ++ + + V+ F+ +L AC+ L +L++G +H+ VF+ + D FV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLT--AWSALIGGYAQLGKACEAIDLFVKMFSSG 273
GLI LYAKC +L A VF + LP+ T +W+A++ YAQ G+ EA+++F +M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
+ P V VL AF +++ GR +H+ ++KMG + ++ Y+KC + +
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
FD+M +++ WNA+I+G+ + + EAI++ +M+ + P+ + ++ ++ + +
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
++E + + + + + +V I SAL+DM+AKCG + AR VFD +++V W+ M+V
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGIS 513
GY HG REA+ +Y M+ + PND TF+G+L AC H G+V EGW +FN M DH I+
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKIN 456
Query: 514 PRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEK 573
P+ H A V+ L G +AYE IK P++P VW LLS CK H+ + LG YAA++
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 574 ILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST 633
+ S DP +T ++ LSN+YA A +WD A+VR MKEK L KD GCSW E++ ++ F
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576
Query: 634 SRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ + ++ + + L +GG+V + S H
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLH 612
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 222/439 (50%), Gaps = 3/439 (0%)
Query: 23 FSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGA 82
F I A+++FD++P + W+A+I G+S+ + AL + M + P+ +T+
Sbjct: 66 FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHL 125
Query: 83 VSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA--SLER 140
+ AC+ + G+ +H +++R G + + V N LI +Y KC L SA+ VF+ ER
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIH 200
+SW +++S+Y Q GE + L+IF RK V + SVL A L +LK G IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 201 SLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKAC 260
+ V K LE + + + L +YAKC ++ A +F ++ P+L W+A+I GYA+ G A
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 261 EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVL 320
EAID+F +M + + P ++ + + A A V R ++ + + + F+++ ++
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 321 DFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
D ++KC +E + FD + DVV W+A+I G+ EAI L + M G PN
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHL 440
T+ +L + + G + + + ++D+ + G L+ A +V +
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Query: 441 SSKNLVS-WNTMLVGYAQH 458
+ V+ W +L +H
Sbjct: 486 PVQPGVTVWGALLSACKKH 504
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 183/376 (48%), Gaps = 29/376 (7%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFD--EMPERNVISWSALISGFSQIGMPEVALN 62
GF +V N L+ +Y K R+ A+ +F+ +PER ++SW+A++S ++Q G P AL
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
F M ++P++ V ++A D + G+ IH + + GLE+ + L MY
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS 182
KCG +++A+ +FD N I W +++S Y + G + +F V S S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPD 242
+ ACA +G+L+ ++ V + D F++ LI+++AKC ++ A VF D
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRD 388
Query: 243 LTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHS 302
+ WSA+I GY G+A EAI L+ M G+ P++VTF +L A HS
Sbjct: 389 VVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACN-----------HS 437
Query: 303 LIIKMGFSSFTFVAN-----------TVLDFYSKCELLEESLKTFDEMD-EHDVVSWNAL 350
+++ G+ F +A+ V+D + L+++ + M + V W AL
Sbjct: 438 GMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 351 IAGHLASCHYGEAIEL 366
L++C +EL
Sbjct: 498 ----LSACKKHRHVEL 509
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
S + +V + L+ M+ K + A+ +FD +R+V+ WSA+I G+ G A++
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+R M + PN T++G + AC G R G RM + C+I++ G+
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGR 471
Query: 124 CGLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVH 160
G L A V + ++ W +LLS+ C +H H
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSA---CKKHRH 506
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 279/482 (57%), Gaps = 1/482 (0%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
++L C V L G +H+ + + D + L+N+YAKC L+ A +VF +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D W+ LI GY+Q + C+A+ F +M G P+E T S V+ A A + G QLH
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+K GF S V + +LD Y++ L++++ FD ++ + VSWNALIAGH
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
+A+EL + ML +G P+ ++Y+++ S +E GK H ++K G G+ L+
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAK G ++DARK+FD L+ +++VSWN++L YAQHG G+EA+ + M+ I+PN+
Sbjct: 305 DMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
+F+ VL+AC H GL++EGWHY+ M +D GI P H +VV L G RA FI+
Sbjct: 365 SFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
PIEP +W+ LL+ C+ HK+ LG YAAE + DP+D H++L N+YA W++
Sbjct: 424 MPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDA 483
Query: 602 AKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
A+VRK MKE +KK+ CSW E++N +H F + Q ++ ++ + + GYV
Sbjct: 484 ARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYV 543
Query: 662 PD 663
PD
Sbjct: 544 PD 545
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 211/437 (48%), Gaps = 37/437 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S F +++ N LL MY K + +A+K+F++MP+R+ ++W+ LISG+SQ P A
Sbjct: 86 ILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDA 145
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +F M+ PN +T + A A+ G ++HG + G + N HV + L+++
Sbjct: 146 LLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDL 205
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y + GL+ AQ VFDA RN +SW +L++ + + L++F + G S FS
Sbjct: 206 YTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSY 265
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS+ GAC+ G L+ G +H+ + K + F L+++YAK + A ++F +
Sbjct: 266 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK 325
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ +W++L+ YAQ G EA+ F +M G+ P+E++F VL A + G
Sbjct: 326 RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 385
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLASCH 359
+ L+ K G + TV+D + L +L+ +EM E W AL L +C
Sbjct: 386 YELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKAL----LNACR 441
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
+ EL Y ++ + D P +V+
Sbjct: 442 MHKNTEL-----------GAYAAEHVFELDPDDPG-----------------PHVI---- 469
Query: 420 LVDMYAKCGRLNDARKV 436
L ++YA GR NDA +V
Sbjct: 470 LYNIYASGGRWNDAARV 486
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 185/388 (47%), Gaps = 3/388 (0%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
G+ +H + +S + + N L+NMY KCG L A+ VF+ +R+ ++W +L+S Y
Sbjct: 78 QGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 154 QCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKF 213
Q L F + G + +EF+ +SV+ A A G Q+H KC + +
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 214 VAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSG 273
V L++LY + +D A VF ++ + +W+ALI G+A+ +A++LF M G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 274 LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESL 333
PS +++ + GA + G+ +H+ +IK G F NT+LD Y+K + ++
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 334 KTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
K FD + + DVVSWN+L+ + EA+ ++M G PN ++ ++L S
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTML 452
++ G + + K G +VD+ + G LN A + + + + + W +L
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 453 VGYAQHGLGREALEIYSMMQENKIKPND 480
H L Y+ ++ P+D
Sbjct: 438 NACRMH--KNTELGAYAAEHVFELDPDD 463
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%)
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
Y+ +L + + G+ H I++ F ++V+G+ L++MYAKCG L +ARKVF+ +
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
++ V+W T++ GY+QH +AL ++ M PN+ T V+ A
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/660 (31%), Positives = 361/660 (54%), Gaps = 3/660 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEV 59
M+ + + L+ MY KF DA ++F E+ ++ NV+ W+ +I GF G+ E
Sbjct: 196 MLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICES 255
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+L+ + L ++ ++ GA+ AC+ ++ G++IH + + GL + +V L++
Sbjct: 256 SLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLS 315
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MY KCG++ A+ VF +++ W +++++Y + L +F R+ V F+
Sbjct: 316 MYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFT 375
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++V+ C+VLG G +H+ +FK ++ + L+ LY+KC A VF +++
Sbjct: 376 LSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME 435
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLF--VKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
D+ AW +LI G + GK EA+ +F +K L P + V A A ++ G
Sbjct: 436 EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFG 495
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
Q+H +IK G FV ++++D YSKC L E +LK F M ++V+WN++I+ + +
Sbjct: 496 LQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRN 555
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+I+L ML +G P+ + +++L S ++ GK H ++ G S+ +
Sbjct: 556 NLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLK 615
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL+DMY KCG A +F + K+L++WN M+ GY HG AL ++ M++
Sbjct: 616 NALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGES 675
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
P+D TF+ ++SAC H G VEEG + F M +D+GI P M+H A++V L G AY
Sbjct: 676 PDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYS 735
Query: 538 FIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
FIK+ PIE + +W CLLS +TH ++ LG +AEK+L +PE S ++ L N+Y EA +
Sbjct: 736 FIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGL 795
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFD 657
+E AK+ +MKEK L K GCSW E+ ++ + F + + ++ V+N+L ++ D
Sbjct: 796 KNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVD 855
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 247/500 (49%), Gaps = 15/500 (3%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDA 136
+T+ + AC++ + GK IHG + G + ++ L+NMY KCG L A VFD
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 137 SLE-------RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
+ R+ W S++ Y + G+ F GV FS + V+
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 190 LGNLKV--GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-LPDLTAW 246
GN + G QIH + + +L+ D F+ LI++Y K A RVF I+ ++ W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+ +I G+ G ++DL++ ++ + +F+ LGA + + + GRQ+H ++K
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
MG + +V ++L YSKC ++ E+ F + + + WNA++A + + + A++L
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M + P+ +T SN+++ S + +GK H + K S I SAL+ +Y+K
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSK 420
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ--ENKIKPNDNTFI 484
CG DA VF + K++V+W +++ G ++G +EAL+++ M+ ++ +KP+ +
Sbjct: 421 CGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMT 480
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
V +AC + + G SMI+ G+ + +S++ L++ G A + S
Sbjct: 481 SVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMST 539
Query: 545 EPNKVVWRCLLSGCKTHKDL 564
E N V W ++S C + +L
Sbjct: 540 E-NMVAWNSMIS-CYSRNNL 557
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 207/425 (48%), Gaps = 22/425 (5%)
Query: 154 QCGEHVHGLKIFLLSRKSGVA---ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF 210
Q GE++ L ++ S+ G + S F+ S+L AC+ L NL G IH V +
Sbjct: 36 QKGEYLQALHLY--SKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRY 93
Query: 211 DKFVAMGLINLYAKCEKLDLASRVF-------SNIQLPDLTAWSALIGGYAQLGKACEAI 263
D F+A L+N+Y KC LD A +VF S + D+T W+++I GY + + E +
Sbjct: 94 DPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGV 153
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVK--ETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
F +M G+ P + S V+ G+Q+H +++ + +F+ ++D
Sbjct: 154 GCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALID 213
Query: 322 FYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLY 380
Y K L ++ + F E+ D+ +VV WN +I G S +++L ML + + L
Sbjct: 214 MYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY--MLAKNNSVKLV 271
Query: 381 --TYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
+++ L S +G+Q HC +VK G ++ + ++L+ MY+KCG + +A VF
Sbjct: 272 STSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFS 331
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+ K L WN M+ YA++ G AL+++ M++ + P+ T V+S C +GL
Sbjct: 332 CVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNY 391
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG- 557
G + + I ++++ L++ G AY KS E + V W L+SG
Sbjct: 392 GKSVHAELFK-RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLISGL 449
Query: 558 CKTHK 562
CK K
Sbjct: 450 CKNGK 454
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/629 (31%), Positives = 351/629 (55%), Gaps = 6/629 (0%)
Query: 26 INDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSA 85
+ DA +LFDEM + + W+ +I GF+ G+ A+ ++ MV ++ + +TY + +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
A GK+IH + + G + +V N LI++Y K G A+ VF+ ER+ +SW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
S++S Y G+ L +F K G FS S LGAC+ + + K+G +IH +
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 206 CALEF-DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAID 264
+E D V ++++Y+K ++ A R+F+ + ++ AW+ +IG YA+ G+ +A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 265 LFVKMF-SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFY 323
F KM +GL P +T +L A A + GR +H ++ GF + ++D Y
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
+C L+ + FD M E +V+SWN++IA ++ + A+EL +++ P+ T +
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+IL ++ ++ G++ H IVK + SN +I ++LV MYA CG L DARK F+H+ K
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
++VSWN++++ YA HG GR ++ ++S M +++ PN +TF +L+AC G+V+EGW YF
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555
Query: 504 NSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKD 563
SM R++GI P ++H ++ L G A F++ P P +W LL+ + HKD
Sbjct: 556 ESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKD 615
Query: 564 LVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTE 623
+ + +AAE+I + ++T +++L N+YAEA W++ +++ +M+ K + + + S E
Sbjct: 616 ITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVE 675
Query: 624 LQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
+ K H F+ + ++EV++ +S
Sbjct: 676 AKGKSHVFTNGDRSHVATNKIYEVLDVVS 704
Score = 199 bits (505), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 234/443 (52%), Gaps = 7/443 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF +V N L+ +Y+K DA+K+F+EMPER+++SW+++ISG+ +G +
Sbjct: 156 VIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSS 215
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLEL-NSHVSNCLIN 119
L F+ M+ C +P+ ++ + A+ AC+ + GKEIH RS +E + V +++
Sbjct: 216 LMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILD 275
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEF 178
MY K G +S A+ +F+ ++RN ++W ++ Y + G F +S ++G+
Sbjct: 276 MYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVI 335
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ ++L A A+L G IH + + LI++Y +C +L A +F +
Sbjct: 336 TSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM 391
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
++ +W+++I Y Q GK A++LF +++ S L+P T + +L A+A+ GR
Sbjct: 392 AEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGR 451
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H+ I+K + S T + N+++ Y+ C LE++ K F+ + DVVSWN++I +
Sbjct: 452 EIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHG 511
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIG 417
++ L +M+ PN T++++L S ++ G + + + G D +
Sbjct: 512 FGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHY 571
Query: 418 SALVDMYAKCGRLNDARKVFDHL 440
++D+ + G + A++ + +
Sbjct: 572 GCMLDLIGRTGNFSAAKRFLEEM 594
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 218/448 (48%), Gaps = 7/448 (1%)
Query: 90 GDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLL 149
G ++ + + Y+ ++N + + L+ A +FD + ++ W ++
Sbjct: 43 GISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMI 102
Query: 150 SSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ CG ++ ++ + +GV F+ V+ + A + +L+ G +IH++V K
Sbjct: 103 KGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFV 162
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
D +V LI+LY K A +VF + D+ +W+++I GY LG ++ LF +M
Sbjct: 163 SDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEM 222
Query: 270 FSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSF-TFVANTVLDFYSKCEL 328
G P + LGA + V G+++H ++ + V ++LD YSK
Sbjct: 223 LKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGE 282
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE-GHCPNLYTYSNILN 387
+ + + F+ M + ++V+WN +I + + +A + M + G P++ T N+L
Sbjct: 283 VSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLP 342
Query: 388 ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
S AI G+ H ++ GF ++V+ +AL+DMY +CG+L A +FD ++ KN++S
Sbjct: 343 AS----AILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVIS 398
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMI 507
WN+++ Y Q+G ALE++ + ++ + P+ T +L A + EG ++
Sbjct: 399 WNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIV 458
Query: 508 RDHGISPRMDHIASVVHLFACRGQTRRA 535
+ S + + S+VH++A G A
Sbjct: 459 KSRYWSNTII-LNSLVHMYAMCGDLEDA 485
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 182/338 (53%), Gaps = 8/338 (2%)
Query: 222 YAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTF 281
+A ++ A ++F + D W+ +I G+ G EA+ + +M +G+ T+
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 282 SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
+V+ + A + G+++H+++IK+GF S +V N+++ Y K ++ K F+EM E
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 342 HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
D+VSWN++I+G+LA ++ L K+ML G P+ ++ + L S + + + GK+
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 402 HCCIVKPGFDS-NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
HC V+ ++ +V++ ++++DMY+K G ++ A ++F+ + +N+V+WN M+ YA++G
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 461 GREALEIYSMMQE-NKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHI 519
+A + M E N ++P+ T I +L A + EG +R G P M
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMR-RGFLPHMVLE 368
Query: 520 ASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+++ ++ GQ + A E I E N + W +++
Sbjct: 369 TALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAA 405
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 130/241 (53%), Gaps = 12/241 (4%)
Query: 323 YSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTY 382
++ L+E++L+ FDEM++ D WN +I G + Y EA++ M+F G + +TY
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 383 SNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
++ + I ++E GK+ H ++K GF S+V + ++L+ +Y K G DA KVF+ +
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
+++VSWN+M+ GY G G +L ++ M + KP+ + + L AC H+ + G
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG--- 250
Query: 503 FNSMIRDHGISPRMDH-----IASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
I H + R++ + S++ +++ G+ A E I + I+ N V W ++ G
Sbjct: 251 --KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA-ERIFNGMIQRNIVAWNVMI-G 306
Query: 558 C 558
C
Sbjct: 307 C 307
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/707 (31%), Positives = 349/707 (49%), Gaps = 52/707 (7%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMP--ERNVISWSALISGFSQIGMPEVALNYFRLMVCCV 71
+HL+ Y+ ++ A L P + V W++LI + G L F LM
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS 122
Query: 72 LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQ 131
P+ YT+ AC R G+ H +G N V N L+ MY +C LS A+
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 132 FVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSCASVLGACAVL 190
VFD + +SW S++ SY + G+ L++F ++ + G + +VL CA L
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G +G Q+H + + FV L+++YAKC +D A+ VFSN+ + D+ +W+A++
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 251 GGYAQLGKACEAIDLFVKM-----------------------------------FSSGLM 275
GY+Q+G+ +A+ LF KM SSG+
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKM-------GFSSFTFVANTVLDFYSKCEL 328
P+EVT VL A V + G+++H IK G V N ++D Y+KC+
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 329 LEESLKTFDEMD--EHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC---PNLYTYS 383
++ + FD + E DVV+W +I G+ +A+ELL +M FE C PN +T S
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM-FEEDCQTRPNAFTIS 481
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDS-NVVIGSALVDMYAKCGRLNDARKVFDHLSS 442
L + + A+ GKQ H ++ ++ + + + L+DMYAKCG ++DAR VFD++ +
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA 541
Query: 443 KNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHY 502
KN V+W +++ GY HG G EAL I+ M+ K + T + VL AC H G++++G Y
Sbjct: 542 KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 503 FNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHK 562
FN M G+SP +H A +V L G+ A I+ P+EP VVW LS C+ H
Sbjct: 602 FNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
Query: 563 DLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWT 622
+ LG YAAEKI ++ +LSN+YA A W + ++R +M+ K +KK GCSW
Sbjct: 662 KVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Query: 623 ELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDPIYSSH 669
E F ++++V+ + D GYVP+ ++ H
Sbjct: 722 EGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALH 768
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 149/533 (27%), Positives = 250/533 (46%), Gaps = 67/533 (12%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF NV N L+ MY + ++DA+K+FDEM +V+SW+++I ++++G P+VAL
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 213
Query: 62 NYFRLMV----CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
F M C P+ T V + CAS G GK++H S + N V NCL
Sbjct: 214 EMFSRMTNEFGC---RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 118 INMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK------- 170
++MY KCG++ A VF ++ +SW ++++ Y Q G +++F ++
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 171 ----------------------------SGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
SG+ +E + SVL CA +G L G +IH
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 203 VFKCALEFDK-------FVAMGLINLYAKCEKLDLASRVFSNI--QLPDLTAWSALIGGY 253
K ++ K V LI++YAKC+K+D A +F ++ + D+ W+ +IGGY
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 254 AQLGKACEAIDLFVKMFSSGLM--PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSS 311
+Q G A +A++L +MF P+ T S L A A + G+Q+H+ ++ ++
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 312 FT-FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
FV+N ++D Y+KC + ++ FD M + V+W +L+ G+ + EA+ + +M
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWG-----KQTHCCIVKPGFDSNVVIGSALVDMYA 425
G + T +L S I+ G + V PG + + LVD+
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHY----ACLVDLLG 626
Query: 426 KCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQHG---LGREALEIYSMMQEN 474
+ GRLN A ++ + + V W L HG LG A E + + N
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASN 679
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/671 (31%), Positives = 351/671 (52%), Gaps = 5/671 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF ++ L I A+ +F + +V ++ L+ GFS P +
Sbjct: 43 IILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSS 102
Query: 61 LNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
L+ F L L+PN TY A+SA + D R+G+ IHG+ G + + + ++
Sbjct: 103 LSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVK 162
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEF 178
MY K + A+ VFD E+++I W +++S Y + +V +++F L +S +
Sbjct: 163 MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT 222
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ +L A A L L++GMQIHSL K +V G I+LY+KC K+ + S +F
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF 282
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ PD+ A++A+I GY G+ ++ LF ++ SG T ++ +
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA-- 340
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H +K F S V+ + YSK +E + K FDE E + SWNA+I+G+ +
Sbjct: 341 -IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+AI L ++M PN T + IL+ + + A+ GK H + F+S++ + +
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 459
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+ MYAKCG + +AR++FD ++ KN V+WNTM+ GY HG G+EAL I+ M + I P
Sbjct: 460 ALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITP 519
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
TF+ VL AC H GLV+EG FNSMI +G P + H A +V + G +RA +F
Sbjct: 520 TPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQF 579
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I++ IEP VW LL C+ HKD L R +EK+ DP++ H++LSN+++ +
Sbjct: 580 IEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNY 639
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
+ A VR+ K++ L K G + E+ H F++ + Q +++E + +L + +
Sbjct: 640 PQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREA 699
Query: 659 GYVPDPIYSSH 669
GY P+ + H
Sbjct: 700 GYQPETELALH 710
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 364 bits (935), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/663 (29%), Positives = 354/663 (53%), Gaps = 7/663 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
H N ++ N ++ +VK ++ A+ LFD MP+R V++W+ L+ +++ + A FR
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 67 MV---CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH--VSNCLINMY 121
M C L P++ T+ + C + ++H + G + N VSN L+ Y
Sbjct: 136 MCRSSSCTL-PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSY 194
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
+ L A +F+ E++S+++ +L++ Y + G + + +FL R+SG S+F+ +
Sbjct: 195 CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFS 254
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
VL A L + +G Q+H+L D V +++ Y+K +++ +F +
Sbjct: 255 GVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL 314
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
D +++ +I Y+Q + ++ F +M G F+ +L A++ GRQLH
Sbjct: 315 DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH 374
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
+ S V N+++D Y+KCE+ EE+ F + + VSW ALI+G++ +G
Sbjct: 375 CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHG 434
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
++L M + T++ +L S+ ++ GKQ H I++ G NV GS LV
Sbjct: 435 AGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLV 494
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
DMYAKCG + DA +VF+ + +N VSWN ++ +A +G G A+ ++ M E+ ++P+
Sbjct: 495 DMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
+ +GVL+AC H G VE+G YF +M +GI+P+ H A ++ L G+ A + +
Sbjct: 555 SILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 614
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDP-EDTSAHIMLSNVYAEANMWDE 600
P EP++++W +L+ C+ HK+ L AAEK+ S + D +A++ +SN+YA A W++
Sbjct: 615 MPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674
Query: 601 TAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGY 660
V+K M+E+ +KK SW E+ +K+H FS++ G ++ +N+L+ + GY
Sbjct: 675 VRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGY 734
Query: 661 VPD 663
PD
Sbjct: 735 KPD 737
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 180/352 (51%), Gaps = 2/352 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+T+GF + N +L Y K R+ + + LFDEMPE + +S++ +IS +SQ E +L
Sbjct: 277 VTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASL 336
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
++FR M C + + + +S A+ + G+++H + + + HV N L++MY
Sbjct: 337 HFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMY 396
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KC + A+ +F + +R ++SW +L+S Y Q G H GLK+F R S + + + A
Sbjct: 397 AKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFA 456
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+VL A A +L +G Q+H+ + + + F GL+++YAKC + A +VF +
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ-L 300
+ +W+ALI +A G AI F KM SGL P V+ VL A + G +
Sbjct: 517 NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF 576
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALI 351
++ G + +LD + E+ K DEM E D + W++++
Sbjct: 577 QAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 114/230 (49%), Gaps = 37/230 (16%)
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
R++ + IIK GF + T +N +++ + + + K +DEM + VS N +I+GH+ +
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 358 -------------------------------CHYGEAIELLKDMLFEGHC--PNLYTYSN 384
H+ EA +L + M C P+ T++
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 385 ILNISSD-IPAIEWGKQTHCCIVKPGFDSN--VVIGSALVDMYAKCGRLNDARKVFDHLS 441
+L +D +P G Q H VK GFD+N + + + L+ Y + RL+ A +F+ +
Sbjct: 153 LLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACV 491
K+ V++NT++ GY + GL E++ ++ M+++ +P+D TF GVL A V
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 2/153 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I SG NV + + L+ MY K I DA ++F+EMP+RN +SW+ALIS + G E A
Sbjct: 478 IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAA 537
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLIN 119
+ F M+ L+P+ + +G ++AC+ G G E M G+ C+++
Sbjct: 538 IGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLD 597
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSS 151
+ G+ G + A+ + D E + I W S+L++
Sbjct: 598 LLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 359 bits (922), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/660 (30%), Positives = 356/660 (53%), Gaps = 1/660 (0%)
Query: 5 GFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYF 64
GF ++ N L+ MY + + A+++FDEMP R+++SW++LISG+S G E AL +
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 65 RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124
+ + P+ +T + A + + G+ +HG +SG+ V+N L+ MY K
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVL 184
+ A+ VFD R+S+S+ +++ Y + +++FL + +SVL
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFL-ENLDQFKPDLLTVSSVL 314
Query: 185 GACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLT 244
AC L +L + I++ + K + V LI++YAKC + A VF++++ D
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTV 374
Query: 245 AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLI 304
+W+++I GY Q G EA+ LF M +T+ ++ + + G+ LHS
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNG 434
Query: 305 IKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAI 364
IK G V+N ++D Y+KC + +SLK F M D V+WN +I+ + + +
Sbjct: 435 IKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGL 494
Query: 365 ELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMY 424
++ M P++ T+ L + + + A GK+ HCC+++ G++S + IG+AL++MY
Sbjct: 495 QVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMY 554
Query: 425 AKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFI 484
+KCG L ++ +VF+ +S +++V+W M+ Y +G G +ALE ++ M+++ I P+ FI
Sbjct: 555 SKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFI 614
Query: 485 GVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPI 544
++ AC H GLV+EG F M + I P ++H A VV L + + +A EFI++ PI
Sbjct: 615 AIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPI 674
Query: 545 EPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKV 604
+P+ +W +L C+T D+ + +I+ +P+D I+ SN YA WD+ + +
Sbjct: 675 KPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLI 734
Query: 605 RKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPDP 664
RK +K+K + K+ G SW E+ +H FS+ + Q +++ + L + GY+PDP
Sbjct: 735 RKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDP 794
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 176/318 (55%), Gaps = 2/318 (0%)
Query: 192 NLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ-LPDLTAWSALI 250
NL +IH+LV L+ F + LI+ Y+ + + VF + ++ W+++I
Sbjct: 19 NLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSII 78
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
+++ G EA++ + K+ S + P + TF V+ A A + + G ++ I+ MGF
Sbjct: 79 RAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFE 138
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S FV N ++D YS+ LL + + FDEM D+VSWN+LI+G+ + +Y EA+E+ ++
Sbjct: 139 SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRL 430
P+ +T S++L ++ ++ G+ H +K G +S VV+ + LV MY K R
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 431 NDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC 490
DAR+VFD + ++ VS+NTM+ GY + + E++ ++ + ++ KP+ T VL AC
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLTVSSVLRAC 317
Query: 491 VHIGLVEEGWHYFNSMIR 508
H+ + + +N M++
Sbjct: 318 GHLRDLSLAKYIYNYMLK 335
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 123/226 (54%), Gaps = 1/226 (0%)
Query: 275 MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLK 334
M + V+ ++ A + R++H+L+I +G S F + ++D YS SL
Sbjct: 1 MQTRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLS 60
Query: 335 TFDEMDE-HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP 393
F + +V WN++I + + EA+E + P+ YT+ +++ + +
Sbjct: 61 VFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 394 AIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLV 453
E G + I+ GF+S++ +G+ALVDMY++ G L AR+VFD + ++LVSWN+++
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLIS 180
Query: 454 GYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEG 499
GY+ HG EALEIY ++ + I P+ T VL A ++ +V++G
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 359 bits (921), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 197/614 (32%), Positives = 332/614 (54%), Gaps = 6/614 (0%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V ++ +Y K + +A ++F +P +V+SW+ ++SG+++ AL F+ M
Sbjct: 284 DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR 343
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
+E N T +SAC ++H +++SG L+S V+ LI+MY K G +
Sbjct: 344 HSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDID 403
Query: 129 SAQFVFDA--SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
++ VF+ ++R +I V +++S+ Q + +++F + G+ EFS S+L
Sbjct: 404 LSEQVFEDLDDIQRQNIVNV-MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL-- 460
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
+VL L +G Q+H K L D V L LY+KC L+ + ++F I D W
Sbjct: 461 -SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACW 519
Query: 247 SALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
+++I G+ + G EAI LF +M G P E T + VL + G+++H ++
Sbjct: 520 ASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLR 579
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
G + + +++ YSKC L+ + + +D + E D VS ++LI+G+ + L
Sbjct: 580 AGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLL 639
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
+DM+ G + + S+IL ++ G Q H I K G + +GS+L+ MY+K
Sbjct: 640 FRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSK 699
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
G ++D K F ++ +L++W ++ YAQHG EAL++Y++M+E KP+ TF+GV
Sbjct: 700 FGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGV 759
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
LSAC H GLVEE + + NSM++D+GI P H +V G+ R A FI + I+P
Sbjct: 760 LSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKP 819
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+ +VW LL+ CK H ++ LG+ AA+K + +P D A+I LSN+ AE WDE + RK
Sbjct: 820 DALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRK 879
Query: 607 IMKEKSLKKDTGCS 620
+MK ++K+ G S
Sbjct: 880 LMKGTGVQKEPGWS 893
Score = 232 bits (592), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 173/604 (28%), Positives = 285/604 (47%), Gaps = 43/604 (7%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G+ + + L+ ++ K R DA K+F + NV W+ +I+G +
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F M +P+ YTY ++ACAS R GK + R+ + G E + V ++++Y
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLY 295
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG ++ A VF + +SW +LS Y + + L+IF R SGV I+ +
Sbjct: 296 AKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVT 355
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVF---SNI 238
SV+ AC + Q+H+ VFK D VA LI++Y+K +DL+ +VF +I
Sbjct: 356 SVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDI 415
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
Q ++ + +I ++Q K +AI LF +M GL E + +L + G+
Sbjct: 416 QRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL---GK 470
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H +K G V +++ YSKC LEES K F + D W ++I+G
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYG 530
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ EAI L +ML +G P+ T + +L + S P++ GK+ H ++ G D + +GS
Sbjct: 531 YLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGS 590
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALV+MY+KCG L AR+V+D L + VS ++++ GY+QHGL ++ ++ M +
Sbjct: 591 ALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTM 650
Query: 479 NDNTFIGVLSAC-----------VH-----IGLVEEG---------WHYFNSM-----IR 508
+ +L A VH IGL E + F S+
Sbjct: 651 DSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAF 710
Query: 509 DHGISPRMDHIASVVHLFACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
P + +++ +A G+ A Y +K +P+KV + +LS C +H LV
Sbjct: 711 SQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSAC-SHGGLV 769
Query: 566 LGRY 569
Y
Sbjct: 770 EESY 773
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 152/556 (27%), Positives = 269/556 (48%), Gaps = 11/556 (1%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V LL Y + DA KLFD +P+ +V+S + +ISG+ Q + E +L +F M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
E N +Y +SAC++ + + + G V + LI+++ K
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A VF SL N W ++++ + + +F ++ +SVL ACA
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
L L+ G + + V KC E D FV +++LYAKC + A VFS I P + +W+
Sbjct: 263 SLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG 308
++ GY + A A+++F +M SG+ + T + V+ A Q+H+ + K G
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381
Query: 309 FSSFTFVANTVLDFYSKC---ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
F + VA ++ YSK +L E+ + D++ ++V N +I S G+AI
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIR 439
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYA 425
L ML EG + ++ ++L++ + + GKQ H +K G ++ +GS+L +Y+
Sbjct: 440 LFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYS 496
Query: 426 KCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIG 485
KCG L ++ K+F + K+ W +M+ G+ ++G REA+ ++S M ++ P+++T
Sbjct: 497 KCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAA 556
Query: 486 VLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIE 545
VL+ C + G +R GI MD +++V++++ G + A + P E
Sbjct: 557 VLTVCSSHPSLPRGKEIHGYTLR-AGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-E 614
Query: 546 PNKVVWRCLLSGCKTH 561
+ V L+SG H
Sbjct: 615 LDPVSCSSLISGYSQH 630
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 183/371 (49%), Gaps = 10/371 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ SG ++ + L +Y K + ++ KLF +P ++ W+++ISGF++ G A+
Sbjct: 477 LKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAI 536
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M+ P+ T ++ C+S GKEIHG R+G++ + + L+NMY
Sbjct: 537 GLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMY 596
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG L A+ V+D E + +S SL+S Y Q G G +F SG + F+ +
Sbjct: 597 SKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAIS 656
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
S+L A A+ +G Q+H+ + K L + V L+ +Y+K +D + FS I P
Sbjct: 657 SILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGP 716
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD---VKETIGGR 298
DL AW+ALI YAQ GKA EA+ ++ M G P +VTF VL A + V+E+
Sbjct: 717 DLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY--F 774
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAGHLAS 357
L+S++ G ++D + L E+ + M + D + W L LA+
Sbjct: 775 HLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTL----LAA 830
Query: 358 CHYGEAIELLK 368
C +EL K
Sbjct: 831 CKIHGEVELGK 841
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 163/303 (53%), Gaps = 2/303 (0%)
Query: 197 MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQL 256
+Q H L+ + L FD F+ L++ Y+ + A+++F I PD+ + + +I GY Q
Sbjct: 70 LQAH-LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQH 128
Query: 257 GKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVA 316
E++ F KM G +E+++ V+ A + ++ + + IKMG+ + V
Sbjct: 129 RLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE 188
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
+ ++D +SK E++ K F + +V WN +IAG L + +YG +L +M
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 377 PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKV 436
P+ YTYS++L + + + +GK ++K G + +V + +A+VD+YAKCG + +A +V
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEV 307
Query: 437 FDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLV 496
F + + ++VSW ML GY + ALEI+ M+ + ++ N+ T V+SAC +V
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 497 EEG 499
E
Sbjct: 368 CEA 370
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/505 (22%), Positives = 235/505 (46%), Gaps = 18/505 (3%)
Query: 93 RSGKEIHGRMYRSGL-ELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSS 151
R+ K + + R L + ++ L++ Y G ++ A +FD + + +S ++S
Sbjct: 65 RTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISG 124
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFD 211
Y Q L+ F G +E S SV+ AC+ L + K F
Sbjct: 125 YKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFY 184
Query: 212 KFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFS 271
+ V LI++++K + + A +VF + ++ W+ +I G + DLF +M
Sbjct: 185 EVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCV 244
Query: 272 SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEE 331
P T+S VL A A +++ G+ + + +IK G + FV ++D Y+KC + E
Sbjct: 245 GFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAE 303
Query: 332 SLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSD 391
+++ F + VVSW +++G+ S A+E+ K+M G N T +++++
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 392 IPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF---DHLSSKNLVSW 448
+ Q H + K GF + + +AL+ MY+K G ++ + +VF D + +N+V
Sbjct: 364 PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-- 421
Query: 449 NTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA--CVHIGLVEEGWHYFNSM 506
N M+ ++Q +A+ +++ M + ++ ++ + +LS C+++G G+ + +
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGL 481
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL-- 564
+ D + +S+ L++ G +Y+ + P + N W ++SG + L
Sbjct: 482 VLDLTVG------SSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISGFNEYGYLRE 534
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLS 589
+G ++ T P++++ +L+
Sbjct: 535 AIGLFSEMLDDGTSPDESTLAAVLT 559
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 359 bits (921), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 215/686 (31%), Positives = 353/686 (51%), Gaps = 27/686 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ +G +V N L+ Y + DA +LFD MPERN++SW+++I FS G E +
Sbjct: 213 VVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES 272
Query: 61 LNYFRLMVCCVLE--------PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSH 112
L++ ++E P+ T V + CA + GK +HG + L+
Sbjct: 273 F----LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 113 VSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSG 172
++N L++MY KCG +++AQ +F + +N +SW +++ + G+ HG L +G
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD-THGTFDVLRQMLAG 387
Query: 173 ---VAISEFSCASVLGAC---AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE 226
V E + + + C + L +LK ++H K +++ VA + YAKC
Sbjct: 388 GEDVKADEVTILNAVPVCFHESFLPSLK---ELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 227 KLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG 286
L A RVF I+ + +W+ALIGG+AQ ++D ++M SGL+P T +L
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Query: 287 AFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVS 346
A + +K G+++H II+ FV +VL Y C L FD M++ +VS
Sbjct: 505 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 564
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
WN +I G+L + A+ + + M+ G + + S +P++ G++ H +
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
K + + I +L+DMYAK G + + KVF+ L K+ SWN M++GY HGL +EA++
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 684
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
++ MQ P+D TF+GVL+AC H GL+ EG Y + M G+ P + H A V+ +
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 744
Query: 527 ACRGQTRRAYEFIKSSPIEPNKV-VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAH 585
GQ +A + E V +W+ LLS C+ H++L +G A K+ +PE +
Sbjct: 745 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENY 804
Query: 586 IMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFST-SRFAQ-FQGID 643
++LSN+YA W++ KVR+ M E SL+KD GCSW EL K+ F RF F+ +
Sbjct: 805 VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFE--E 862
Query: 644 LHEVMNQLSVHLFDGGYVPDPIYSSH 669
+ + + L + + GY PD + H
Sbjct: 863 IKSLWSILEMKISKMGYRPDTMSVQH 888
Score = 192 bits (488), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 232/484 (47%), Gaps = 7/484 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV-L 72
++ MY +D++ +FD + +N+ W+A+IS +S+ + + L F M+ L
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P+++TY + ACA D G +HG + ++GL + V N L++ YG G ++ A
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 133 VFDASLERNSISWVSLLSSYCQCG---EHVHGLKIFLLSRKSGVAISEFSC-ASVLGACA 188
+FD ERN +SW S++ + G E L + G + + + +VL CA
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSA 248
+ +G +H K L+ + + L+++Y+KC + A +F ++ +W+
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNT 363
Query: 249 LIGGYAQLGKACEAIDLFVKMFSSG--LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIK 306
++GG++ G D+ +M + G + EVT + ++LH +K
Sbjct: 364 MVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK 423
Query: 307 MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIEL 366
F VAN + Y+KC L + + F + V SWNALI GH S +++
Sbjct: 424 QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA 483
Query: 367 LKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAK 426
M G P+ +T ++L+ S + ++ GK+ H I++ + ++ + +++ +Y
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG L + +FD + K+LVSWNT++ GY Q+G AL ++ M I+ + + V
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 487 LSAC 490
AC
Sbjct: 604 FGAC 607
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 163/318 (51%), Gaps = 8/318 (2%)
Query: 183 VLGACAVLGNLKVGMQIHSLVF-KCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
+L A ++++G +IH LV L D + +I +YA C D + VF ++
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQL 300
+L W+A+I Y++ E ++ F++M S + L+P T+ V+ A A + + G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H L++K G FV N ++ FY + ++L+ FD M E ++VSWN++I +
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 361 GEAIELLKDMLFE----GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
E+ LL +M+ E P++ T +L + + I GK H VK D +V+
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQE--N 474
+AL+DMY+KCG + +A+ +F ++KN+VSWNTM+ G++ G ++ M
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 475 KIKPNDNTFIGVLSACVH 492
+K ++ T + + C H
Sbjct: 390 DVKADEVTILNAVPVCFH 407
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 385 ILNISSDIPAIEWGKQTHCCIV-KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
+L S IE G++ H + ++ V+ + ++ MYA CG +D+R VFD L SK
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 444 NLVSWNTMLVGYAQHGLGREALEIY-SMMQENKIKPNDNTFIGVLSAC-----VHIGLVE 497
NL WN ++ Y+++ L E LE + M+ + P+ T+ V+ AC V IGL
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLL 555
G ++ D + ++V + G A + P E N V W ++
Sbjct: 210 HGLVVKTGLVEDVFVG------NALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMI 260
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 359 bits (921), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 204/674 (30%), Positives = 374/674 (55%), Gaps = 10/674 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
SG ++ + L+ + K ++ A+K+F++M RN ++ + L+ G + E A
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 64 FRLMVCCV-LEPNYYTYVGAV---SACASRGDARSGKEIHGRMYRSGL-ELNSHVSNCLI 118
F M + + P Y + + + A + G+E+HG + +GL + + N L+
Sbjct: 297 FMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLV 356
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
NMY KCG ++ A+ VF +++S+SW S+++ Q G + ++ + R+ + F
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S L +CA L K+G QIH K ++ + V+ L+ LYA+ L+ ++FS++
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 239 QLPDLTAWSALIGGYAQLGKAC-EAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
D +W+++IG A+ ++ EA+ F+ +G + +TFS VL A + + G
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEH-DVVSWNALIAGHLA 356
+Q+H L +K + N ++ Y KC ++ K F M E D V+WN++I+G++
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ +A++L+ ML G + + Y+ +L+ + + +E G + H C V+ +S+VV+
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ-ENK 475
GSALVDMY+KCGRL+ A + F+ + +N SWN+M+ GYA+HG G EAL+++ M+ + +
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 716
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
P+ TF+GVLSAC H GL+EEG+ +F SM +G++PR++H + + + G+ +
Sbjct: 717 TPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKL 776
Query: 536 YEFIKSSPIEPNKVVWRCLLSGC--KTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
+FI+ P++PN ++WR +L C + LG+ AAE + +PE+ +++L N+YA
Sbjct: 777 EDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYA 836
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W++ K RK MK+ +KK+ G SW +++ +H F + +++ + +L+
Sbjct: 837 AGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNR 896
Query: 654 HLFDGGYVPDPIYS 667
+ D GYVP ++
Sbjct: 897 KMRDAGYVPQTGFA 910
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 142/460 (30%), Positives = 246/460 (53%), Gaps = 12/460 (2%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V N+L+ Y++ A+K+FDEMP RN +SW+ ++SG+S+ G + AL + R MV
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 69 CCVLEPNYYTYVGAVSACASRGDARS--GKEIHGRMYRSGLELNSHVSNCLINMYGKC-G 125
+ N Y +V + AC G G++IHG M++ +++ VSN LI+MY KC G
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 126 LLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCAS-VL 184
+ A F +NS+SW S++S Y Q G+ +IF + G +E++ S V
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 185 GACAVL-GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
AC++ ++++ QI + K L D FV GL++ +AK L A +VF+ ++ +
Sbjct: 215 TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNA 274
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD--VKETIG---GR 298
+ L+ G + EA LF+ M +S + S ++ +L +F + + E +G GR
Sbjct: 275 VTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGR 333
Query: 299 QLHSLIIKMGFSSFTF-VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
++H +I G F + N +++ Y+KC + ++ + F M + D VSWN++I G +
Sbjct: 334 EVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+ EA+E K M P +T + L+ + + + G+Q H +K G D NV +
Sbjct: 394 GCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVS 453
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 457
+AL+ +YA+ G LN+ RK+F + + VSWN+++ A+
Sbjct: 454 NALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR 493
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 244/487 (50%), Gaps = 22/487 (4%)
Query: 83 VSACAS-RGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERN 141
V +C RG AR H R+Y++ L+ + ++ N LIN Y + G SA+ VFD RN
Sbjct: 10 VQSCVGHRGAARF---FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN 66
Query: 142 SISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV--GMQI 199
+SW ++S Y + GEH L K G+ ++++ SVL AC +G++ + G QI
Sbjct: 67 CVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQI 126
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKC-EKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK 258
H L+FK + D V+ LI++Y KC + A F +I++ + +W+++I Y+Q G
Sbjct: 127 HGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGD 186
Query: 259 ACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG--RQLHSLIIKMGFSSFTFVA 316
A +F M G P+E TF ++ + E Q+ I K G + FV
Sbjct: 187 QRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVG 246
Query: 317 NTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
+ ++ ++K L + K F++M+ + V+ N L+ G + EA +L DM
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM---NSM 303
Query: 377 PNLYTYSNILNISS-------DIPAIEWGKQTHCCIVKPGF-DSNVVIGSALVDMYAKCG 428
++ S ++ +SS + ++ G++ H ++ G D V IG+ LV+MYAKCG
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG 363
Query: 429 RLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS 488
+ DAR+VF ++ K+ VSWN+M+ G Q+G EA+E Y M+ + I P T I LS
Sbjct: 364 SIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLS 423
Query: 489 ACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNK 548
+C + + G ++ GI + +++ L+A G + S P E ++
Sbjct: 424 SCASLKWAKLGQQIHGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQ 481
Query: 549 VVWRCLL 555
V W ++
Sbjct: 482 VSWNSII 488
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 187/371 (50%), Gaps = 18/371 (4%)
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
HS ++K L+ D ++ LIN Y + A +VF + L + +W+ ++ GY++ G+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKET--IGGRQLHSLIIKMGFSSFTFVAN 317
EA+ M G+ ++ F VL A ++ + GRQ+H L+ K+ ++ V+N
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 318 TVLDFYSKC-ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC 376
++ Y KC + +L F +++ + VSWN++I+ + + A + M ++G
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 377 PNLYTYSNILNISSDI--PAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
P YT+ +++ + + P + +Q C I K G +++ +GS LV +AK G L+ AR
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
KVF+ + ++N V+ N ++VG + G EA +++ M + I + +++ +LS+
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF-MDMNSMIDVSPESYVILLSSFPEYS 322
Query: 495 LVEEGWHYFNSMIRDHGISPRM-DHIASV----VHLFACRG---QTRRAYEFIKSSPIEP 546
L EE + H I+ + D + + V+++A G RR + F+ +
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM----TDK 378
Query: 547 NKVVWRCLLSG 557
+ V W +++G
Sbjct: 379 DSVSWNSMITG 389
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 355 bits (910), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 200/662 (30%), Positives = 356/662 (53%), Gaps = 5/662 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEV 59
++T G +V+ L+ +Y A+ +F+ R +V W++L+SG+S+ M
Sbjct: 30 ILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHD 89
Query: 60 ALNYF-RLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLI 118
L F RL+ C + P+ +T+ + A + G G+ IH + +SG + V++ L+
Sbjct: 90 TLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLV 149
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY K L ++ VFD ER+ SW +++S + Q GE L++F SG +
Sbjct: 150 GMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSV 209
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S + AC+ L L+ G +IH K E D++V L+++Y KC+ L++A VF +
Sbjct: 210 SLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKM 269
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
L AW+++I GY G + +++ +M G PS+ T + +L A + + + G+
Sbjct: 270 PRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK 329
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H +I+ ++ +V +++D Y KC + F + + SWN +I+ +++
Sbjct: 330 FIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVG 389
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
++ +A+E+ M+ G P++ T++++L S + A+E GKQ H I + +++ ++ S
Sbjct: 390 NWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLS 449
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMY+KCG +A ++F+ + K++VSW M+ Y HG REAL + MQ+ +KP
Sbjct: 450 ALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKP 509
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ T + VLSAC H GL++EG +F+ M +GI P ++H + ++ + G+ AYE
Sbjct: 510 DGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEI 569
Query: 539 IKSSP-IEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANM 597
I+ +P N + L S C H + LG A ++ P+D S +++L N+YA
Sbjct: 570 IQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGES 629
Query: 598 WDETAKVRKIMKEKSLKKDTGCSWTELQNKM-HYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
WD +VR MKE L+K GCSW E+ +K+ H+F+ R + + +++E + LS H+
Sbjct: 630 WDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDR-SHLRAENVYECLALLSGHME 688
Query: 657 DG 658
G
Sbjct: 689 SG 690
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 237/471 (50%), Gaps = 4/471 (0%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSIS-WVSLLSS 151
R K +H R+ GL + + LIN+Y C SA+ VF+ R+ + W SL+S
Sbjct: 21 RRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSG 80
Query: 152 YCQCGEHVHGLKIFLLSRKSGVAISE-FSCASVLGACAVLGNLKVGMQIHSLVFKCALEF 210
Y + L++F + + + F+ +V+ A LG +G IH+LV K
Sbjct: 81 YSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVC 140
Query: 211 DKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF 270
D VA L+ +YAK + + +VF + D+ +W+ +I + Q G+A +A++LF +M
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 271 SSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLE 330
SSG P+ V+ + + A + + G+++H +K GF +V + ++D Y KC+ LE
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260
Query: 331 ESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISS 390
+ + F +M +V+WN++I G++A +E+L M+ EG P+ T ++IL S
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACS 320
Query: 391 DIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNT 450
+ GK H +++ ++++ + +L+D+Y KCG N A VF SWN
Sbjct: 321 RSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNV 380
Query: 451 MLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDH 510
M+ Y G +A+E+Y M +KP+ TF VL AC + +E+G S I +
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS-ISES 439
Query: 511 GISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ +++++ +++ G + A+ S P + + V W ++S +H
Sbjct: 440 RLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSH 489
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 353 bits (906), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 317/560 (56%), Gaps = 8/560 (1%)
Query: 80 VGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLE 139
V + C +G + G ++H + +SG LN SN LI+MY KC A VFD+ E
Sbjct: 10 VSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 140 RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQI 199
RN +SW +L+S + G+ L +F + G+ +EF+ ++ L AC +L L+ G+QI
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
H K E V L+++Y+KC +++ A +VF I L +W+A+I G+ G
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 260 CEAIDLFVKMFSSGL--MPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF--SSFTFV 315
+A+D F M + + P E T + +L A + G+Q+H +++ GF S +
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGH 375
+++D Y KC L + K FD++ E ++SW++LI G+ + EA+ L K +
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 376 CPNLYTYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSNVVIGSALVDMYAKCGRLNDA 433
+ + S+I+ + +D + GKQ VK G +++V+ +++VDMY KCG +++A
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEA 367
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
K F + K+++SW ++ GY +HGLG++++ I+ M + I+P++ ++ VLSAC H
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
G+++EG F+ ++ HGI PR++H A VV L G+ + A I + PI+PN +W+
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487
Query: 554 LLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSL 613
LLS C+ H D+ LG+ + +L D ++ + ++M+SN+Y +A W+E R++ K L
Sbjct: 488 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547
Query: 614 KKDTGCSWTELQNKMHYFST 633
KK+ G SW E++ ++H+F +
Sbjct: 548 KKEAGMSWVEIEREVHFFRS 567
Score = 228 bits (582), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 245/476 (51%), Gaps = 9/476 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG N+IT N+L+ MY K A K+FD MPERNV+SWSAL+SG G + +
Sbjct: 32 LLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGS 91
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F M + PN +T+ + AC G +IHG + G E+ V N L++M
Sbjct: 92 LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVA--ISEF 178
Y KCG ++ A+ VF ++R+ ISW ++++ + G L F + +++ + EF
Sbjct: 152 YSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEF 211
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALE--FDKFVAMGLINLYAKCEKLDLASRVFS 236
+ S+L AC+ G + G QIH + + + L++LY KC L A + F
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
I+ + +WS+LI GYAQ G+ EA+ LF ++ S ++G FAD
Sbjct: 272 QIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQ 331
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+Q+ +L +K+ T V N+V+D Y KC L++E+ K F EM DV+SW +I G+
Sbjct: 332 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVV 415
+++ + +ML P+ Y +L+ S I+ G++ +++ G V
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451
Query: 416 IGSALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHG---LGREALEI 467
+ +VD+ + GRL +A+ + D + K N+ W T+L HG LG+E +I
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKI 507
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 202/618 (32%), Positives = 332/618 (53%), Gaps = 8/618 (1%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLE 73
N+L+ MYV+ + A+K+FD+MP RNV+S++AL S +S+ P+ A F L E
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSR--NPDFASYAFPLTTHMAFE 193
Query: 74 ---PNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSA 130
PN T+ V CA D G ++ ++ + G N V ++ MY CG L SA
Sbjct: 194 YVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
Query: 131 QFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVL 190
+ +FD R++++W +++ + + GL F SGV ++F+ + VL C+ L
Sbjct: 254 RRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKL 313
Query: 191 GNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALI 250
G+ +G IH+ + D + L+++Y C + A VF I P+L +W+++I
Sbjct: 314 GSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSII 373
Query: 251 GGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
G ++ G +A+ ++ ++ S P E TFS + A A+ + + G+ LH + K+G+
Sbjct: 374 SGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGY 433
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKD 369
FV T+L Y K E + K FD M E DVV W +I GH + A++ +
Sbjct: 434 ERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIE 493
Query: 370 MLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGR 429
M E + + ++ S+++ SD+ + G+ HC ++ GFD + + ALVDMY K G+
Sbjct: 494 MYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGK 553
Query: 430 LNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
A +F S+ +L WN+ML Y+QHG+ +AL + + EN P+ T++ +L+A
Sbjct: 554 YETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAA 613
Query: 490 CVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKV 549
C H G +G +N M ++ GI H + +V+L + G A E I+ SP N+
Sbjct: 614 CSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQA 672
Query: 550 -VWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIM 608
+WR LLS C ++L +G YAAE+IL DPEDT+ HI+LSN+YA W++ A++R+ +
Sbjct: 673 ELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKI 732
Query: 609 KEKSLKKDTGCSWTELQN 626
+ + KD G SW E+ N
Sbjct: 733 RGLASSKDPGLSWIEVNN 750
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/560 (25%), Positives = 268/560 (47%), Gaps = 15/560 (2%)
Query: 14 NHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPE------VALNYFRLM 67
N+L+ MYV+ S + A+K+FD+MP+RN+++ L + F + M + L F+++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSG---LELNSHVSNCLINMYGKC 124
L + V C S + ++IH + +G + + +N LI+MY +C
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC 145
Query: 125 GLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHV-HGLKIFLLSRKSGVAISEFSCASV 183
G L A+ VFD RN +S+ +L S+Y + + + + V + + S+
Sbjct: 146 GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSL 205
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
+ CAVL ++ +G ++S + K + V ++ +Y+ C L+ A R+F + D
Sbjct: 206 VQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDA 265
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
AW+ +I G + K + + F M SG+ P++ T+S VL + + G+ +H+
Sbjct: 266 VAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHAR 325
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
II + + N +LD Y C + E+ F + ++VSWN++I+G + +GE
Sbjct: 326 IIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG-CSENGFGEQ 384
Query: 364 IELLKDMLFEGHC--PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALV 421
L+ L P+ YT+S ++ +++ GK H + K G++ +V +G+ L+
Sbjct: 385 AMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLL 444
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
MY K A+KVFD + +++V W M+VG+++ G A++ + M K + +
Sbjct: 445 SMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGF 504
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
+ V+ AC + ++ +G F+ + G M ++V ++ G+ A E I S
Sbjct: 505 SLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETIFS 562
Query: 542 SPIEPNKVVWRCLLSGCKTH 561
P+ W +L H
Sbjct: 563 LASNPDLKCWNSMLGAYSQH 582
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 203/389 (52%), Gaps = 11/389 (2%)
Query: 112 HVSNCLINMYGKCGLLSSAQFVFDASLERNSISW--VSLLSSYCQCGEHVHGLKIFLLSR 169
+ +N LI+MY +C L A+ VFD +RN ++ +S + Y G +H I L S
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 170 KS--GVAISEF--SCASVLGACAVLGNLKVGMQIHSLVFKC---ALEFDKFVAMGLINLY 222
+ + ++E S + C + LK QIH+LV A + LI++Y
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 223 AKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK-ACEAIDLFVKMFSSGLMPSEVTF 281
+C L+ A +VF + ++ +++AL Y++ A A L M + P+ TF
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 282 SYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE 341
+ ++ A +++ + G L+S IIK+G+S V +VL YS C LE + + FD ++
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 342 HDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQT 401
D V+WN +I G L + + + ++ML G P +TYS +LN S + + GK
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
H I+ +++ + +AL+DMY CG + +A VF + + NLVSWN+++ G +++G G
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 462 REALEIY-SMMQENKIKPNDNTFIGVLSA 489
+A+ +Y +++ + +P++ TF +SA
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 224/489 (45%), Gaps = 17/489 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ NV+ +L MY + A+++FD + R+ ++W+ +I G + E
Sbjct: 225 IIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDG 284
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L +FR M+ ++P +TY ++ C+ G GK IH R+ S + + N L++M
Sbjct: 285 LMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDM 344
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK----SGVAIS 176
Y CG + A +VF N +SW S++S C E+ G + L+ R+ S
Sbjct: 345 YCSCGDMREAFYVFGRIHNPNLVSWNSIISG---CSENGFGEQAMLMYRRLLRMSTPRPD 401
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
E++ ++ + A A G +H V K E FV L+++Y K + + A +VF
Sbjct: 402 EYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFD 461
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
++ D+ W+ +I G+++LG + A+ F++M+ + S V+GA +D+
Sbjct: 462 VMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQ 521
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G H L I+ GF V ++D Y K E + F D+ WN+++ +
Sbjct: 522 GEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQ 581
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+A+ + +L G P+ TY ++L S + GK + + G +
Sbjct: 582 HGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKH 641
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVS--WNTML---VGYAQHGLGREALEIYSMM 471
S +V++ +K G +++A ++ + N + W T+L V +G +Y+
Sbjct: 642 YSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIG-----LYAAE 696
Query: 472 QENKIKPND 480
Q K+ P D
Sbjct: 697 QILKLDPED 705
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 135/297 (45%), Gaps = 24/297 (8%)
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA----GHLASCHYGEAIE 365
+ + + N ++ Y +C LE++ K FD+M + ++V+ L A + S + + I+
Sbjct: 19 AEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIK 78
Query: 366 LLK-DMLFEGHCPNLYTYSNILNISS---DIPAIEWGKQTHCCIVKPGFDS---NVVIGS 418
L M+F P S+++ ++ I ++ +Q H ++ G + + +
Sbjct: 79 LGSFQMIF--FMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANN 136
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQH-GLGREALEIYSMMQENKIK 477
L+ MY +CG L ARKVFD + +N+VS+N + Y+++ A + + M +K
Sbjct: 137 NLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK 196
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQ---TRR 534
PN +TF ++ C + V G NS I G S + SV+ +++ G RR
Sbjct: 197 PNSSTFTSLVQVCAVLEDVLMG-SSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKIL--STDPEDTSAHIMLS 589
++ + + + V W ++ G + + G +L DP + I+L+
Sbjct: 256 IFDCVNNR----DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLN 308
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 348 bits (892), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 306/550 (55%), Gaps = 4/550 (0%)
Query: 117 LINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
LI Y + GL+ A+ +FD +R+ ++W ++++ Y + + F K G + +
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCE-KLDLASRVF 235
EF+ +SVL +C + L G +H +V K +E +V ++N+YA C ++ A +F
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIF 170
Query: 236 SNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETI 295
+I++ + W+ LI G+ LG + ++ +M + + + A A +
Sbjct: 171 RDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVT 230
Query: 296 GGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHL 355
G+Q+H+ +IK GF S V N++LD Y +C L E+ F EM++ D+++WN LI+ L
Sbjct: 231 TGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS-EL 289
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
EA+ + + +G PN YT+++++ ++I A+ G+Q H I + GF+ NV
Sbjct: 290 ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVE 349
Query: 416 IGSALVDMYAKCGRLNDARKVFDHL-SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
+ +AL+DMYAKCG + D+++VF + +NLVSW +M++GY HG G EA+E++ M +
Sbjct: 350 LANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS 409
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
I+P+ F+ VLSAC H GLVE+G YFN M ++GI+P D VV L G+
Sbjct: 410 GIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGE 469
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHK-DLVLGRYAAEKILSTDPEDTSAHIMLSNVYA 593
AYE ++ P +P++ W +L CK HK + ++ R AA K++ P+ ++MLS +YA
Sbjct: 470 AYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYA 529
Query: 594 EANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSV 653
W + A+VRK+M+ KK+ G SW ++N++ F+ S ++ V+ L
Sbjct: 530 AEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIE 589
Query: 654 HLFDGGYVPD 663
+ GYVP+
Sbjct: 590 ETREAGYVPE 599
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 232/452 (51%), Gaps = 5/452 (1%)
Query: 11 ITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCC 70
I +L++ Y + + +A+ LFDEMP+R+V++W+A+I+G++ A F MV
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 71 VLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL-LSS 129
PN +T + +C + G +HG + + G+E + +V N ++NMY C + + +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 130 AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAV 189
A +F +N ++W +L++ + G+ + GLK++ ++ + + A A
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
+ ++ G QIH+ V K + + V +++LY +C L A F ++ DL W+ L
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 250 IGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGF 309
I + + EA+ +F + S G +P+ TF+ ++ A A++ G+QLH I + GF
Sbjct: 286 ISELER-SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF 344
Query: 310 SSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHLASCHYGEAIELLK 368
+ +AN ++D Y+KC + +S + F E+ D ++VSW +++ G+ + + EA+EL
Sbjct: 345 NKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 369 DMLFEGHCPNLYTYSNILNISSDIPAIEWG-KQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M+ G P+ + +L+ +E G K + + G + + I + +VD+ +
Sbjct: 405 KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 428 GRLNDARKVFDHLSSK-NLVSWNTMLVGYAQH 458
G++ +A ++ + + K + +W +L H
Sbjct: 465 GKIGEAYELVERMPFKPDESTWGAILGACKAH 496
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 132/255 (51%), Gaps = 4/255 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF N+ N +L +Y + +++A+ F EM ++++I+W+ LIS + E A
Sbjct: 239 VIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSE-A 297
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ PN YT+ V+ACA+ G+++HGR++R G N ++N LI+M
Sbjct: 298 LLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDM 357
Query: 121 YGKCGLLSSAQFVFDASLE-RNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG + +Q VF ++ RN +SW S++ Y G +++F SG+
Sbjct: 358 YAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIV 417
Query: 180 CASVLGACAVLGNLKVGMQIHSLV-FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+VL AC G ++ G++ +++ + + D+ + +++L + K+ A + +
Sbjct: 418 FMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
Query: 239 QL-PDLTAWSALIGG 252
PD + W A++G
Sbjct: 478 PFKPDESTWGAILGA 492
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 4/244 (1%)
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
N ++ ++ K L+EE+ FDEM + DVV+W A+I G+ +S + A E +M+ +
Sbjct: 47 LATNLIVSYFEKG-LVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCG-RLND 432
G PN +T S++L ++ + +G H +VK G + ++ + +A+++MYA C +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVH 492
A +F + KN V+W T++ G+ G G L++Y M + + A
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 493 IGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWR 552
I V G S+I+ G + + S++ L+ G A + + + + W
Sbjct: 226 IDSVTTGKQIHASVIK-RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLITWN 283
Query: 553 CLLS 556
L+S
Sbjct: 284 TLIS 287
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQEN 474
++ + L+ Y + G + +AR +FD + +++V+W M+ GYA A E + M +
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 475 KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRR 534
PN+ T VL +C ++ ++ G + ++ G+ + ++++++A T
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYG-ALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 535 AYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
A I N V W L++G D + G +++L + E T I ++
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA 219
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 348 bits (892), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 200/672 (29%), Positives = 351/672 (52%), Gaps = 4/672 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPER-NVISWSALISGFSQIGMPEV 59
++ G+H N L+ MY K ++ A++LFD E+ + + W++++S +S G
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 267
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLI 118
L FR M PN YT V A++AC A+ GKEIH + +S + +V N LI
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALI 327
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
MY +CG + A+ + + ++W SL+ Y Q + L+ F +G E
Sbjct: 328 AMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEV 387
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S S++ A L NL GM++H+ V K + + V LI++Y+KC R F +
Sbjct: 388 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 447
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
DL +W+ +I GYAQ EA++LF + + E+ +L A + +K + +
Sbjct: 448 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVK 507
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H I++ G T + N ++D Y KC + + + F+ + DVVSW ++I+ +
Sbjct: 508 EIHCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNG 566
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+ EA+EL + M+ G + IL+ ++ + A+ G++ HC +++ GF I
Sbjct: 567 NESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV 626
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
A+VDMYA CG L A+ VFD + K L+ + +M+ Y HG G+ A+E++ M+ + P
Sbjct: 627 AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSP 686
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ +F+ +L AC H GL++EG + M ++ + P +H +V + A+EF
Sbjct: 687 DHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEF 746
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
+K EP VW LL+ C++H + +G AA+++L +P++ +++SNV+AE W
Sbjct: 747 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRW 806
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL-FD 657
++ KVR MK ++K GCSW E+ K+H F+ + + +++E +++++ L +
Sbjct: 807 NDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLERE 866
Query: 658 GGYVPDPIYSSH 669
GYV D + H
Sbjct: 867 VGYVADTKFVLH 878
Score = 251 bits (642), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 273/522 (52%), Gaps = 4/522 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ MY K ++DA+K+FDEMP+R +W+ +I + G P AL + M +
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
++ + ACA D RSG E+H + + G + N L++MY K LS+A+ +FD
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 136 ASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
E+ +++ W S+LSSY G+ + L++F +G A + ++ S L AC K
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 195 VGMQIHSLVFKCALEFDK-FVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
+G +IH+ V K + + +V LI +Y +C K+ A R+ + D+ W++LI GY
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
Q EA++ F M ++G EV+ + ++ A + + G +LH+ +IK G+ S
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
V NT++D YSKC L + F M + D++SW +IAG+ + + EA+EL +D+ +
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
+ +IL SS + ++ K+ HC I++ G + VI + LVD+Y KC + A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYA 540
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 493
+VF+ + K++VSW +M+ A +G EA+E++ M E + + + +LSA +
Sbjct: 541 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASL 600
Query: 494 GLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+ +G ++R G +VV ++AC G + A
Sbjct: 601 SALNKGREIHCYLLRK-GFCLEGSIAVAVVDMYACCGDLQSA 641
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 229/417 (54%), Gaps = 7/417 (1%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRS--GLELNSHVSNCLINMYGKCGLLSSAQFVF 134
+ YV + C R G+++H R++++ EL+ ++ L+ MYGKCG L A+ VF
Sbjct: 83 FAYV--LELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVF 139
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
D +R + +W +++ +Y GE L ++ R GV + S ++L ACA L +++
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 199
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP-DLTAWSALIGGY 253
G ++HSL+ K F+ L+++YAK + L A R+F Q D W++++ Y
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMG-FSSF 312
+ GK+ E ++LF +M +G P+ T L A G+++H+ ++K SS
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 313 TFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLF 372
+V N ++ Y++C + ++ + +M+ DVV+WN+LI G++ + Y EA+E DM+
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
GH + + ++I+ S + + G + H ++K G+DSN+ +G+ L+DMY+KC
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 439
Query: 433 ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
+ F + K+L+SW T++ GYAQ+ EALE++ + + +++ ++ +L A
Sbjct: 440 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 381 TYSNILNISSDIPAIEWGKQTHCCIVK--PGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
++ +L + A+ G+Q H I K P F+ + + G LV MY KCG L+DA KVFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKCGSLDDAEKVFD 140
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEE 498
+ + +WNTM+ Y +G AL +Y M+ + ++F +L AC + +
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 499 GWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
G +S++ G + ++V ++A A + + V+W +LS
Sbjct: 201 GSE-LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 559 KT 560
T
Sbjct: 260 ST 261
>sp|Q9SUF9|PP305_ARATH Pentatricopeptide repeat-containing protein At4g08210
OS=Arabidopsis thaliana GN=PCMP-E100 PE=3 SV=1
Length = 686
Score = 348 bits (892), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 205/655 (31%), Positives = 339/655 (51%), Gaps = 35/655 (5%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G NV N+++ MYV F ++DA K+FDEM ERN+++W+ ++SG++ G P A
Sbjct: 31 VIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKA 90
Query: 61 LNYFRLMVCCVLEP-NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ +R M+ E N + Y + AC GD + G ++ R+ + L + + N +++
Sbjct: 91 IELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVD 150
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-------------L 166
MY K G L A F L +S SW +L+S YC+ G + +F L
Sbjct: 151 MYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCL 210
Query: 167 LS-----------------RKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+S ++ G+ + F+ L AC+ G L +G Q+H V K LE
Sbjct: 211 ISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLE 270
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLP---DLTAWSALIGGYAQLGKACEAIDLF 266
F LI++Y+ C L A+ VF +L + W++++ G+ + A+ L
Sbjct: 271 SSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLL 330
Query: 267 VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKC 326
++++ S L T S L + G Q+HSL++ G+ V + ++D ++
Sbjct: 331 LQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANV 390
Query: 327 ELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNIL 386
++++ K F + D+++++ LI G + S A L ++++ G + + SNIL
Sbjct: 391 GNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNIL 450
Query: 387 NISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLV 446
+ S + ++ WGKQ H +K G++S V +ALVDMY KCG +++ +FD + +++V
Sbjct: 451 KVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVV 510
Query: 447 SWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
SW ++VG+ Q+G EA + M I+PN TF+G+LSAC H GL+EE +M
Sbjct: 511 SWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETM 570
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVL 566
++G+ P ++H VV L G + A E I P+EP+K +W LL+ C THK+ L
Sbjct: 571 KSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGL 630
Query: 567 GRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSW 621
AEK+L P+D S + LSN YA MWD+ +KVR+ K K K++G SW
Sbjct: 631 VTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAK-KLGAKESGMSW 684
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/553 (24%), Positives = 243/553 (43%), Gaps = 91/553 (16%)
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
C + G+ I + + G+ N ++N +I+MY LLS A VFD ERN ++W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 146 VSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLV 203
+++S Y G+ ++++ +L + A +EF ++VL AC ++G++++G+ ++ +
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAA-NEFMYSAVLKACGLVGDIQLGILVYERI 133
Query: 204 FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAI 263
K L D + ++++Y K +L A+ F I P T+W+ LI GY + G EA+
Sbjct: 134 GKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAV 193
Query: 264 DLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG--------------------------- 296
LF +M P+ V+++ ++ F D
Sbjct: 194 TLFHRMPQ----PNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACS 249
Query: 297 -------GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD---EHDVVS 346
G+QLH ++K G S F + ++D YS C L + F + V
Sbjct: 250 FGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV 309
Query: 347 WNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV 406
WN++++G L + A+ LL + C + YT S L I + + G Q H +V
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Query: 407 KPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALE 466
G++ + ++GS LVD++A G + DA K+F L +K++++++ ++ G + G +L
Sbjct: 370 VSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF--NSLA 427
Query: 467 IYSMMQENKIKPNDNTFI--GVLSAC---------------------------------- 490
Y + K+ + + FI +L C
Sbjct: 428 FYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDM 487
Query: 491 -VHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF---IKSSPIEP 546
V G ++ G F+ M+ +S ++ F G+ A+ + + + IEP
Sbjct: 488 YVKCGEIDNGVVLFDGMLERDVVS-----WTGIIVGFGQNGRVEEAFRYFHKMINIGIEP 542
Query: 547 NKVVWRCLLSGCK 559
NKV + LLS C+
Sbjct: 543 NKVTFLGLLSACR 555
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 188/415 (45%), Gaps = 42/415 (10%)
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
A+ L C + K G I + V K + + F+A +I++Y L A +VF +
Sbjct: 9 AAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSE 68
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSS-GLMPSEVTFSYVL---GAFADVK---- 292
++ W+ ++ GY GK +AI+L+ +M S +E +S VL G D++
Sbjct: 69 RNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGIL 128
Query: 293 --ETIGGRQLHSLIIKM---------------GFSSFTFVA-------NTVLDFYSKCEL 328
E IG L ++ M SSF + NT++ Y K L
Sbjct: 129 VYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGL 188
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
++E++ F M + +VVSWN LI+G + A+E L M EG + + L
Sbjct: 189 MDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKA 247
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVF--DHLSSKNLV 446
S + GKQ HCC+VK G +S+ SAL+DMY+ CG L A VF + L+ + V
Sbjct: 248 CSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Query: 447 S-WNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNS 505
+ WN+ML G+ + AL + + ++ + + T G L C++ + G +S
Sbjct: 308 AVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ-VHS 366
Query: 506 MIRDHGISPRMDHIAS--VVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGC 558
++ G +D+I +V L A G + A++ P + + + L+ GC
Sbjct: 367 LVVVSGY--ELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGC 418
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 318/584 (54%), Gaps = 8/584 (1%)
Query: 77 YTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS-HVSNCLINMYGKCGLLSSAQFVFD 135
Y+Y AC G+ +H RM R G+E S + NC++ MY +C L A +FD
Sbjct: 84 YSYQCLFEACRELRSLSHGRLLHDRM-RMGIENPSVLLQNCVLQMYCECRSLEDADKLFD 142
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
E N++S +++S+Y + G + +F SG ++L + L
Sbjct: 143 EMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDF 202
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G QIH+ V + L + + G++N+Y KC L A RVF + + A + L+ GY Q
Sbjct: 203 GRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQ 262
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFV 315
G+A +A+ LFV + + G+ FS VL A A ++E G+Q+H+ + K+G S V
Sbjct: 263 AGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSV 322
Query: 316 ANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE-G 374
++DFY KC E + + F E+ E + VSW+A+I+G+ + EA++ K + +
Sbjct: 323 GTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNA 382
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
N +TY++I S + G Q H +K + SAL+ MY+KCG L+DA
Sbjct: 383 SILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAN 442
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
+VF+ + + ++V+W + G+A +G EAL ++ M +KPN TFI VL+AC H G
Sbjct: 443 EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAG 502
Query: 495 LVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCL 554
LVE+G H ++M+R + ++P +DH ++ ++A G A +F+K+ P EP+ + W+C
Sbjct: 503 LVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCF 562
Query: 555 LSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLK 614
LSGC THK+L LG A E++ DPEDT+ +++ N+Y A W+E A++ K+M E+ LK
Sbjct: 563 LSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLK 622
Query: 615 KDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
K+ CSW + + K+H F Q +++E + + FDG
Sbjct: 623 KELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKE-----FDG 661
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/457 (30%), Positives = 231/457 (50%), Gaps = 7/457 (1%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRL 66
+P+V+ N +L MY + + DA KLFDEM E N +S + +IS +++ G+ + A+ F
Sbjct: 115 NPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSG 174
Query: 67 MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGL 126
M+ +P Y + + + G++IH + R+GL N+ + ++NMY KCG
Sbjct: 175 MLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234
Query: 127 LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGA 186
L A+ VFD + ++ L+ Y Q G LK+F+ GV F + VL A
Sbjct: 235 LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKA 294
Query: 187 CAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAW 246
CA L L +G QIH+ V K LE + V L++ Y KC + A R F I+ P+ +W
Sbjct: 295 CASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSW 354
Query: 247 SALIGGYAQLGKACEAIDLFVKMFS-SGLMPSEVTFSYVLGAFADVKETIGGRQLHSLII 305
SA+I GY Q+ + EA+ F + S + + + T++ + A + + + G Q+H+ I
Sbjct: 355 SAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAI 414
Query: 306 KMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIE 365
K + + ++ YSKC L+++ + F+ MD D+V+W A I+GH + EA+
Sbjct: 415 KRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALR 474
Query: 366 LLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCC---IVKPGFDSNVVIGSALVD 422
L + M+ G PN T+ +L S +E GK HC + K + ++D
Sbjct: 475 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK--HCLDTMLRKYNVAPTIDHYDCMID 532
Query: 423 MYAKCGRLNDARKVFDHLS-SKNLVSWNTMLVGYAQH 458
+YA+ G L++A K ++ + +SW L G H
Sbjct: 533 IYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTH 569
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 187/356 (52%), Gaps = 3/356 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I +G N ++ MYVK + A+++FD+M + ++ + L+ G++Q G A
Sbjct: 210 VIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDA 269
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F +V +E + + + + ACAS + GK+IH + + GLE V L++
Sbjct: 270 LKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDF 329
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFS 179
Y KC SA F E N +SW +++S YCQ + +K F L K+ ++ F+
Sbjct: 330 YIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFT 389
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
S+ AC+VL + +G Q+H+ K +L ++ LI +Y+KC LD A+ VF ++
Sbjct: 390 YTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD 449
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
PD+ AW+A I G+A G A EA+ LF KM S G+ P+ VTF VL A + G+
Sbjct: 450 NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKH 509
Query: 300 -LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
L +++ K + + ++D Y++ LL+E+LK M E D +SW ++G
Sbjct: 510 CLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 181/389 (46%), Gaps = 3/389 (0%)
Query: 170 KSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLD 229
K+GV++S +S + AC L +L G +H + + ++ +Y +C L+
Sbjct: 76 KAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLE 135
Query: 230 LASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA 289
A ++F + + + + +I YA+ G +A+ LF M +SG P ++ +L +
Sbjct: 136 DADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLV 195
Query: 290 DVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA 349
+ + GRQ+H+ +I+ G S T + +++ Y KC L + + FD+M V+
Sbjct: 196 NPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTG 255
Query: 350 LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
L+ G+ + +A++L D++ EG + + +S +L + + + GKQ H C+ K G
Sbjct: 256 LMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLG 315
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY- 468
+S V +G+ LVD Y KC A + F + N VSW+ ++ GY Q EA++ +
Sbjct: 316 LESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFK 375
Query: 469 SMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFAC 528
S+ +N N T+ + AC + G I+ I + A + C
Sbjct: 376 SLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC 435
Query: 529 RGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
G A E +S P+ V W +SG
Sbjct: 436 -GCLDDANEVFESMD-NPDIVAWTAFISG 462
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 204/652 (31%), Positives = 350/652 (53%), Gaps = 4/652 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G + + LL MY + ++DA+K+FD MP R++++WS L+S + G A
Sbjct: 127 IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKA 186
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F+ MV +EP+ T + V CA G R + +HG++ R +L+ + N L+ M
Sbjct: 187 LRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTM 246
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG L S++ +F+ ++N++SW +++SSY + L+ F KSG+ + +
Sbjct: 247 YSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTL 306
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFD-KFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SVL +C ++G ++ G +H + L+ + + +++ L+ LYA+C KL V +
Sbjct: 307 YSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVS 366
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
++ AW++LI YA G +A+ LF +M + + P T + + A + G+Q
Sbjct: 367 DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQ 426
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
+H +I+ S FV N+++D YSK ++ + F+++ VV+WN+++ G + +
Sbjct: 427 IHGHVIRTDVSD-EFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGN 485
Query: 360 YGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSA 419
EAI L M N T+ ++ S I ++E GK H ++ G ++ +A
Sbjct: 486 SVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTA 544
Query: 420 LVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
L+DMYAKCG LN A VF +SS+++VSW++M+ Y HG A+ ++ M E+ KPN
Sbjct: 545 LIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPN 604
Query: 480 DNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFI 539
+ F+ VLSAC H G VEEG +YFN +++ G+SP +H A + L + G + AY I
Sbjct: 605 EVVFMNVLSACGHSGSVEEGKYYFN-LMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTI 663
Query: 540 KSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWD 599
K P + VW L++GC+ H+ + + + + +DT + +LSN+YAE W+
Sbjct: 664 KEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWE 723
Query: 600 ETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQL 651
E ++R MK +LKK G S E+ K+ F + Q +++ + L
Sbjct: 724 EFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 261/501 (52%), Gaps = 3/501 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++T + + L+ Y + ++ +F+ P + + LI + + A
Sbjct: 25 LVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAA 84
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACA-SRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
++ + +V + + + + + ACA SR G ++HGR+ + G++ ++ + L+
Sbjct: 85 IDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLC 144
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
MYG+ G LS A+ VFD R+ ++W +L+SS + GE V L++F GV +
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVT 204
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
SV+ CA LG L++ +H + + + D+ + L+ +Y+KC L + R+F I
Sbjct: 205 MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA 264
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ +W+A+I Y + + +A+ F +M SG+ P+ VT VL + + G+
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 300 LHSLIIKMGFS-SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+H ++ ++ ++ +++ Y++C L + + + ++V+WN+LI+ +
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
+A+ L + M+ + P+ +T ++ ++ + + GKQ H +++ S+ + +
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQN 443
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
+L+DMY+K G ++ A VF+ + +++V+WN+ML G++Q+G EA+ ++ M + ++
Sbjct: 444 SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 503
Query: 479 NDNTFIGVLSACVHIGLVEEG 499
N+ TF+ V+ AC IG +E+G
Sbjct: 504 NEVTFLAVIQACSSIGSLEKG 524
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 345 bits (885), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 184/605 (30%), Positives = 315/605 (52%), Gaps = 37/605 (6%)
Query: 95 GKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQ 154
K++H + R+ L+ ++ +I++Y LL A +F ++W S++ +
Sbjct: 24 AKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82
Query: 155 CGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFV 214
L F+ R SG SVL +C ++ +L+ G +H + + ++ D +
Sbjct: 83 QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 215 AMGLINLYAKCEKL------------------------------------DLASRVFSNI 238
L+N+YAK + D RVF +
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVM 202
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
D+ +++ +I GYAQ G +A+ + +M ++ L P T S VL F++ + I G+
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
++H +I+ G S ++ ++++D Y+K +E+S + F + D +SWN+L+AG++ +
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
Y EA+ L + M+ P +S+++ + + + GKQ H +++ GF SN+ I S
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
ALVDMY+KCG + ARK+FD ++ + VSW +++G+A HG G EA+ ++ M+ +KP
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
N F+ VL+AC H+GLV+E W YFNSM + +G++ ++H A+V L G+ AY F
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNF 502
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I +EP VW LLS C HK+L L AEKI + D E+ A++++ N+YA W
Sbjct: 503 ISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRW 562
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDG 658
E AK+R M++K L+K CSW E++NK H F + + ++E + + +
Sbjct: 563 KEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKE 622
Query: 659 GYVPD 663
GYV D
Sbjct: 623 GYVAD 627
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 222/465 (47%), Gaps = 40/465 (8%)
Query: 33 FDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDA 92
F + V++W ++I F+ + AL F M P++ + + +C D
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGK-CGL------------------------- 126
R G+ +HG + R G++ + + N L+NMY K G+
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 127 ----------LSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+ S + VF+ ++ +S+ ++++ Y Q G + L++ + +
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
F+ +SVL + ++ G +IH V + ++ D ++ L+++YAK +++ + RVFS
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ D +W++L+ GY Q G+ EA+ LF +M ++ + P V FS V+ A A +
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
G+QLH +++ GF S F+A+ ++D YSKC ++ + K FD M+ D VSW A+I GH
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIE--WGKQTHCCIVKPGFDSNV 414
H EA+ L ++M +G PN + +L S + ++ WG V G + +
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY-GLNQEL 480
Query: 415 VIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQH 458
+A+ D+ + G+L +A + + S W+T+L + H
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 150/266 (56%)
Query: 26 INDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSA 85
I+ +++F+ MP ++V+S++ +I+G++Q GM E AL R M L+P+ +T +
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 86 CASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISW 145
+ D GKEIHG + R G++ + ++ + L++MY K + ++ VF R+ ISW
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 146 VSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFK 205
SL++ Y Q G + L++F + V + +SV+ ACA L L +G Q+H V +
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 206 CALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDL 265
+ F+A L+++Y+KC + A ++F + + D +W+A+I G+A G EA+ L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 266 FVKMFSSGLMPSEVTFSYVLGAFADV 291
F +M G+ P++V F VL A + V
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHV 457
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 129/254 (50%), Gaps = 6/254 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G +V + L+ MY K +RI D++++F + R+ ISW++L++G+ Q G A
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEA 327
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L FR MV ++P + + ACA GK++HG + R G N +++ L++M
Sbjct: 328 LRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDM 387
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + +A+ +FD + +SW +++ + G + +F ++ GV ++ +
Sbjct: 388 YSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAF 447
Query: 181 ASVLGACAVLGNLKVG---MQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+VL AC+ +G + + V+ E + + A+ +L + KL+ A S
Sbjct: 448 VAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA--DLLGRAGKLEEAYNFISK 505
Query: 238 IQL-PDLTAWSALI 250
+ + P + WS L+
Sbjct: 506 MCVEPTGSVWSTLL 519
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 37/233 (15%)
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+K +QLH+ I+ S T A+ V+ Y+ +LL E+L F + V++W ++
Sbjct: 18 IKSKSQAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSV 76
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
I + +A+ +M G CP+ + ++L + + + +G+ H IV+ G
Sbjct: 77 IRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGM 136
Query: 411 DSNVVIGSALVDMYAK---------CGRLND---------------------------AR 434
D ++ G+AL++MYAK G + D R
Sbjct: 137 DCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVR 196
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
+VF+ + K++VS+NT++ GYAQ G+ +AL + M +KP+ T VL
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/618 (33%), Positives = 328/618 (53%), Gaps = 11/618 (1%)
Query: 15 HLLLMYVKFSRINDAQKLFDEMPER--NVISWSALISGFSQIGMPEVALNYFRLMVCCVL 72
+L +Y + + A+ +FDE+P N I+W +I ++ E AL+ + M+ +
Sbjct: 40 NLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGV 99
Query: 73 EPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQF 132
P YTY + ACA GK IH + S + +V L++ Y KCG L A
Sbjct: 100 RPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIK 159
Query: 133 VFDASLERNSISWVSLLSSYCQ--CGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAV 189
VFD +R+ ++W +++S + C V GL FL + R G++ + + + A
Sbjct: 160 VFDEMPKRDMVAWNAMISGFSLHCCLTDVIGL--FLDMRRIDGLSPNLSTIVGMFPALGR 217
Query: 190 LGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSAL 249
G L+ G +H + D V G++++YAK + + A RVF + WSA+
Sbjct: 218 AGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAM 277
Query: 250 IGGYAQLGKACEAIDLFVKMFSSG--LMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
IGGY + EA ++F +M + M + V +L A + GGR +H +K
Sbjct: 278 IGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKA 337
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
GF V NT++ FY+K L ++ + F E+ DV+S+N+LI G + +C E+ L
Sbjct: 338 GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLF 397
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
+M G P++ T +L S + A+ G H V G+ N I +AL+DMY KC
Sbjct: 398 HEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKC 457
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G+L+ A++VFD + +++VSWNTML G+ HGLG+EAL +++ MQE + P++ T + +L
Sbjct: 458 GKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAIL 517
Query: 488 SACVHIGLVEEGWHYFNSMIR-DHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
SAC H GLV+EG FNSM R D + PR+DH + L A G AY+F+ P EP
Sbjct: 518 SACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEP 577
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
+ V LLS C T+K+ LG ++K+ S E T + ++LSN Y+ A W++ A++R
Sbjct: 578 DIRVLGTLLSACWTYKNAELGNEVSKKMQSLG-ETTESLVLLSNTYSAAERWEDAARIRM 636
Query: 607 IMKEKSLKKDTGCSWTEL 624
I K++ L K G SW ++
Sbjct: 637 IQKKRGLLKTPGYSWVDV 654
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 207/435 (47%), Gaps = 5/435 (1%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFS-QIGMPEVALN 62
S F ++ L+ Y K + A K+FDEMP+R++++W+A+ISGFS + +V
Sbjct: 132 SDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGL 191
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+ + L PN T VG A G R GK +HG R G + V ++++Y
Sbjct: 192 FLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA 251
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEFSC 180
K + A+ VFD ++N ++W +++ Y + ++F +L + ++ +
Sbjct: 252 KSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAI 311
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
+L CA G+L G +H K D V +I+ YAK L A R FS I L
Sbjct: 312 GLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL 371
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
D+ ++++LI G + E+ LF +M +SG+ P T VL A + + G
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC 431
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHY 360
H + G++ T + N ++D Y+KC L+ + + FD M + D+VSWN ++ G
Sbjct: 432 HGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLG 491
Query: 361 GEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG--S 418
EA+ L M G P+ T IL+ S ++ GKQ + + F+ I +
Sbjct: 492 KEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYN 551
Query: 419 ALVDMYAKCGRLNDA 433
+ D+ A+ G L++A
Sbjct: 552 CMTDLLARAGYLDEA 566
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 175/329 (53%), Gaps = 12/329 (3%)
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDK-FVAMGLINLYAKCEKLDLASRVFSNIQL 240
S+L C NL +G IH + K +L V + L LYA C +++LA VF I
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 241 PDLT--AWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
P + AW +I YA A +A+DL+ KM +SG+ P++ T+ +VL A A ++ G+
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
+HS + F++ +V ++DFY+KC LE ++K FDEM + D+V+WNA+I+G C
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 359 HYGEAIELLKDM-LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+ I L DM +G PNL T + A+ GK H + GF +++V+
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+ ++D+YAK + AR+VFD KN V+W+ M+ GY ++ + +EA E++ M
Sbjct: 244 TGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML----- 298
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
NDN + V IGL+ G F +
Sbjct: 299 VNDNV---AMVTPVAIGLILMGCARFGDL 324
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 122/254 (48%), Gaps = 7/254 (2%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
+ +GF ++ N ++ Y K+ + DA + F E+ ++VIS+++LI+G PE +
Sbjct: 335 VKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESF 394
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + P+ T +G ++AC+ G HG G +N+ + N L++MY
Sbjct: 395 RLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMY 454
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG L A+ VFD +R+ +SW ++L + G L +F +++GV E +
Sbjct: 455 TKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLL 514
Query: 182 SVLGACAVLGNLKVGMQIHSLV----FKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
++L AC+ G + G Q+ + + F D + M +L A+ LD A +
Sbjct: 515 AILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCM--TDLLARAGYLDEAYDFVNK 572
Query: 238 IQL-PDLTAWSALI 250
+ PD+ L+
Sbjct: 573 MPFEPDIRVLGTLL 586
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 197/639 (30%), Positives = 330/639 (51%), Gaps = 67/639 (10%)
Query: 92 ARSGKEIHGRMYRSGLELNSHVS-NCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLS 150
+++G +H R + L + S N +++ Y K G + S FD +R+S+SW +++
Sbjct: 60 SKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIV 119
Query: 151 SYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEF 210
Y G++ +++ K G+ ++F+ +VL + A ++ G ++HS + K L
Sbjct: 120 GYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRG 179
Query: 211 DKFVAMGLINLYAKCE-------------------------------KLDLASRVFSNIQ 239
+ V+ L+N+YAKC ++DLA F +
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM-PSEVTFSYVLGAFADVKETIGGR 298
D+ W+++I G+ Q G A+D+F KM L+ P T + VL A A++++ G+
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE-------------------- 338
Q+HS I+ GF V N ++ YS+C +E + + ++
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK 359
Query: 339 -------------MDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNI 385
+ + DVV+W A+I G+ YGEAI L + M+ G PN YT + +
Sbjct: 360 LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Query: 386 LNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS-SKN 444
L+++S + ++ GKQ H VK G +V + +AL+ MYAK G + A + FD + ++
Sbjct: 420 LSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERD 479
Query: 445 LVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFN 504
VSW +M++ AQHG EALE++ M ++P+ T++GV SAC H GLV +G YF+
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD 539
Query: 505 SMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
M I P + H A +V LF G + A EFI+ PIEP+ V W LLS C+ HK++
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNI 599
Query: 565 VLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTEL 624
LG+ AAE++L +PE++ A+ L+N+Y+ W+E AK+RK MK+ +KK+ G SW E+
Sbjct: 600 DLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEV 659
Query: 625 QNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++K+H F + +++ M ++ + GYVPD
Sbjct: 660 KHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPD 698
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 63/257 (24%)
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNA---------- 349
+H +IK G ++ N +++ YSK + K FDEM SWN
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 350 ---------------------LIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
+I G+ Y +AI ++ DM+ EG P +T +N+L
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 389 SSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD---------- 438
+ +E GK+ H IVK G NV + ++L++MYAKCG A+ VFD
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 439 ---------------------HLSSKNLVSWNTMLVGYAQHGLGREALEIYS-MMQENKI 476
++ +++V+WN+M+ G+ Q G AL+I+S M++++ +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 477 KPNDNTFIGVLSACVHI 493
P+ T VLSAC ++
Sbjct: 276 SPDRFTLASVLSACANL 292
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 87/190 (45%), Gaps = 8/190 (4%)
Query: 402 HCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLG 461
HC ++K G +V + + L+++Y+K G ARK+FD + + SWNT+L Y++ G
Sbjct: 37 HCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDM 96
Query: 462 REALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIAS 521
E + + + + ++ ++ +IG + M+++ GI P + +
Sbjct: 97 DSTCEFFDQLPQR----DSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE-GIEPTQFTLTN 151
Query: 522 VVHLFA---CRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTD 578
V+ A C ++ + FI + N V LL+ D ++ ++ ++++ D
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 579 PEDTSAHIML 588
+A I L
Sbjct: 212 ISSWNAMIAL 221
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 343 bits (880), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/636 (30%), Positives = 339/636 (53%), Gaps = 5/636 (0%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I G ++ N +L Y+KF + A LFDEMP+R+ +SW+ +ISG++ G E A
Sbjct: 27 IKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAW 86
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
F M + + Y++ + AS G+++HG + + G E N +V + L++MY
Sbjct: 87 CLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMY 146
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF-LLSRKSGVAISEFSC 180
KC + A F E NS+SW +L++ + Q + + L+ K+ V + +
Sbjct: 147 AKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTF 206
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ- 239
A +L + Q+H+ V K L+ + + +I+ YA C + A RVF +
Sbjct: 207 APLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG 266
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
DL +W+++I G+++ A +LF++M + T++ +L A + + I G+
Sbjct: 267 SKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSK--CELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
LH ++IK G T N ++ Y + +E++L F+ + D++SWN++I G
Sbjct: 327 LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQK 386
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
+A++ + + Y +S +L SD+ ++ G+Q H K GF SN +
Sbjct: 387 GLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVI 446
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSK-NLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
S+L+ MY+KCG + ARK F +SSK + V+WN M++GYAQHGLG+ +L+++S M +
Sbjct: 447 SSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV 506
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
K + TF +L+AC H GL++EG N M + I PRM+H A+ V L G +A
Sbjct: 507 KLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAK 566
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
E I+S P+ P+ +V + L C+ ++ + A +L +PED ++ LS++Y++
Sbjct: 567 ELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLK 626
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFS 632
W+E A V+K+MKE+ +KK G SW E++N++ F+
Sbjct: 627 KWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFN 662
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 202/406 (49%), Gaps = 37/406 (9%)
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
H KC D +V+ +++ Y K L A+ +F + D +W+ +I GY GK
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
+A LF M SG +FS +L A VK G Q+H L+IK G+ +V +++
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCP-N 378
+D Y+KCE +E++ + F E+ E + VSWNALIAG + A LL M + +
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
T++ +L + D KQ H ++K G + I +A++ YA CG ++DA++VFD
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 439 HL-SSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSAC------- 490
L SK+L+SWN+M+ G+++H L A E++ MQ + ++ + T+ G+LSAC
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322
Query: 491 ----VHIGLVEEGWHYF----NSMIRDHGISP---------------RMDHIA--SVVHL 525
+H ++++G N++I + P D I+ S++
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382
Query: 526 FACRGQTRRAYEF---IKSSPIEPNKVVWRCLLSGCKTHKDLVLGR 568
FA +G + A +F ++SS I+ + + LL C L LG+
Sbjct: 383 FAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 227/447 (50%), Gaps = 8/447 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I G+ NV + L+ MY K R+ DA + F E+ E N +SW+ALI+GF Q+ + A
Sbjct: 127 VIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTA 186
Query: 61 LNYFRLM-VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
LM + + + T+ ++ K++H ++ + GL+ + N +I+
Sbjct: 187 FWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMIS 246
Query: 120 MYGKCGLLSSAQFVFDA-SLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
Y CG +S A+ VFD ++ ISW S+++ + + ++F+ ++ V +
Sbjct: 247 SYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIY 306
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAK--CEKLDLASRVFS 236
+ +L AC+ + G +H +V K LE LI++Y + ++ A +F
Sbjct: 307 TYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFE 366
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+++ DL +W+++I G+AQ G + +A+ F + SS + + FS +L + +D+
Sbjct: 367 SLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQL 426
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEM-DEHDVVSWNALIAGHL 355
G+Q+H+L K GF S FV ++++ YSKC ++E + K F ++ +H V+WNA+I G+
Sbjct: 427 GQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYA 486
Query: 356 ASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVV 415
+++L M + + T++ IL S I+ G + +++P +
Sbjct: 487 QHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL-LNLMEPVYKIQPR 545
Query: 416 IG--SALVDMYAKCGRLNDARKVFDHL 440
+ +A VD+ + G +N A+++ + +
Sbjct: 546 MEHYAAAVDLLGRAGLVNKAKELIESM 572
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 2/164 (1%)
Query: 401 THCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGL 460
THC +K G S++ + + ++D Y K G L A +FD + ++ VSWNTM+ GY G
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 461 GREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIA 520
+A +++ M+ + + +F +L + + G +I+ G + +
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKG-GYECNVYVGS 140
Query: 521 SVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDL 564
S+V ++A + A+E K EPN V W L++G +D+
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAGFVQVRDI 183
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 342 bits (878), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 206/667 (30%), Positives = 343/667 (51%), Gaps = 12/667 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S NV L+ +Y + A+ FD + R+V +W+ +ISG+ + G
Sbjct: 77 LVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEV 136
Query: 61 LNYFRL-MVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
+ F L M+ L P+Y T+ + AC + D G +IH + G + +V+ LI+
Sbjct: 137 IRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIH 193
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV-AISEF 178
+Y + + +A+ +FD R+ SW +++S YCQ G L + +G+ A+
Sbjct: 194 LYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSV 248
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ S+L AC G+ G+ IHS K LE + FV+ LI+LYA+ +L +VF +
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ DL +W+++I Y + AI LF +M S + P +T + + + + R
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 299 QLHSLIIKMG-FSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
+ ++ G F + N V+ Y+K L++ + F+ + DV+SWN +I+G+ +
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 358 CHYGEAIELLKDMLFEGH-CPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
EAIE+ M EG N T+ ++L S A+ G + H ++K G +V +
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
++L DMY KCGRL DA +F + N V WNT++ + HG G +A+ ++ M + +
Sbjct: 489 VTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 548
Query: 477 KPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAY 536
KP+ TF+ +LSAC H GLV+EG F M D+GI+P + H +V ++ GQ A
Sbjct: 549 KPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETAL 608
Query: 537 EFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEAN 596
+FIKS ++P+ +W LLS C+ H ++ LG+ A+E + +PE H++LSN+YA A
Sbjct: 609 KFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAG 668
Query: 597 MWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLF 656
W+ ++R I K L+K G S E+ NK+ F T +++ + L L
Sbjct: 669 KWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Query: 657 DGGYVPD 663
GYVPD
Sbjct: 729 MIGYVPD 735
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 245/470 (52%), Gaps = 18/470 (3%)
Query: 93 RSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSY 152
+S K +H R+ S N +S L+N+Y G ++ A+ FD R+ +W ++S Y
Sbjct: 68 QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGY 127
Query: 153 CQCG---EHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALE 209
+ G E + +F+LS SG+ + SVL AC + + G +IH L K
Sbjct: 128 GRAGNSSEVIRCFSLFMLS--SGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFM 182
Query: 210 FDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKM 269
+D +VA LI+LY++ + + A +F + + D+ +W+A+I GY Q G A EA+ L
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL---- 238
Query: 270 FSSGLMPSE-VTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
S+GL + VT +L A + + G +HS IK G S FV+N ++D Y++
Sbjct: 239 -SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGR 297
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNI 388
L + K FD M D++SWN++I + + AI L ++M P+ T ++ +I
Sbjct: 298 LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASI 357
Query: 389 SSDIPAIEWGKQTHCCIVKPG-FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVS 447
S + I + ++ G F ++ IG+A+V MYAK G ++ AR VF+ L + +++S
Sbjct: 358 LSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS 417
Query: 448 WNTMLVGYAQHGLGREALEIYSMMQEN-KIKPNDNTFIGVLSACVHIGLVEEGWHYFNSM 506
WNT++ GYAQ+G EA+E+Y++M+E +I N T++ VL AC G + +G +
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 507 IRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLS 556
+++ G+ + + S+ ++ G+ A P N V W L++
Sbjct: 478 LKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIA 525
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 342 bits (877), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 212/675 (31%), Positives = 344/675 (50%), Gaps = 17/675 (2%)
Query: 3 TSGFHPNVITYNHLLLM--------YVK-FSRINDAQKLFDEMPERNVISWSALISGFSQ 53
+SG +PN IT L + VK F+ NDA + + +I + +S +
Sbjct: 239 SSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSE------IIFRNKGLSEYLH 292
Query: 54 IGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHV 113
G L F MV +E + T++ ++ G+++H + GL+L V
Sbjct: 293 SGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTV 352
Query: 114 SNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGV 173
SN LINMY K A+ VFD ER+ ISW S+++ Q G V + +F+ + G+
Sbjct: 353 SNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL 412
Query: 174 AISEFSCASVLGACAVLGN-LKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLAS 232
+++ SVL A + L L + Q+H K D FV+ LI+ Y++ + A
Sbjct: 413 KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Query: 233 RVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVK 292
+F DL AW+A++ GY Q + + LF M G + T + V +
Sbjct: 473 ILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF 531
Query: 293 ETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
G+Q+H+ IK G+ +V++ +LD Y KC + + FD + D V+W +I+
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS 591
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
G + + A + M G P+ +T + + SS + A+E G+Q H +K +
Sbjct: 592 GCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN 651
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
+ +G++LVDMYAKCG ++DA +F + N+ +WN MLVG AQHG G+E L+++ M+
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 711
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQT 532
IKP+ TFIGVLSAC H GLV E + + SM D+GI P ++H + + G
Sbjct: 712 SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLV 771
Query: 533 RRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVY 592
++A I+S +E + ++R LL+ C+ D G+ A K+L +P D+SA+++LSN+Y
Sbjct: 772 KQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMY 831
Query: 593 AEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLS 652
A A+ WDE R +MK +KKD G SW E++NK+H F + Q ++ + +
Sbjct: 832 AAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMI 891
Query: 653 VHLFDGGYVPDPIYS 667
+ GYVP+ ++
Sbjct: 892 RDIKQEGYVPETDFT 906
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 147/548 (26%), Positives = 264/548 (48%), Gaps = 38/548 (6%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPN 75
L+ +Y+KF ++ + + LF+EMP R+V+ W+ ++ + ++G E A++ L PN
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN 245
Query: 76 YYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFD 135
T + A S D+ +G+ + + +G + +S VS + G
Sbjct: 246 EITL--RLLARISGDDSDAGQV---KSFANGNDASS-VSEIIFRNKG------------- 286
Query: 136 ASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKV 195
LS Y G++ LK F +S V + + +L + +L +
Sbjct: 287 -------------LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLAL 333
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQ 255
G Q+H + K L+ V+ LIN+Y K K A VF N+ DL +W+++I G AQ
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 256 LGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG-GRQLHSLIIKMGFSSFTF 314
G EA+ LF+++ GL P + T + VL A + + E + +Q+H IK+ S +F
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 315 VANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEG 374
V+ ++D YS+ ++E+ F E D+V+WNA++AG+ S + ++L M +G
Sbjct: 454 VSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 375 HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDAR 434
+ +T + + + AI GKQ H +K G+D ++ + S ++DMY KCG ++ A+
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 435 KVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG 494
FD + + V+W TM+ G ++G A ++S M+ + P++ T + A +
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 495 LVEEGWH-YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRC 553
+E+G + N++ + P + S+V ++A G AY K + N W
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNA 689
Query: 554 LLSGCKTH 561
+L G H
Sbjct: 690 MLVGLAQH 697
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/561 (22%), Positives = 253/561 (45%), Gaps = 47/561 (8%)
Query: 7 HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ-----IGMPEVAL 61
+P N+L+ MY K + A+++FD+MP+R+++SW+++++ ++Q + + A
Sbjct: 71 NPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAF 130
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
FR++ V+ + T + C G + + HG + GL+ + V+ L+N+Y
Sbjct: 131 LLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIY 190
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS-- 179
K G + + +F+ R+ + W +L +Y + G + + SG+ +E +
Sbjct: 191 LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLR 250
Query: 180 -CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
A + G + G +K + + ++ +F N
Sbjct: 251 LLARISGDDSDAGQVK-------------------------SFANGNDASSVSEIIFRNK 285
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
L + Y G+ + F M S + +VTF +L V G+
Sbjct: 286 GLSE----------YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQ 335
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASC 358
Q+H + +K+G V+N++++ Y K + FD M E D++SWN++IAG +
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 359 HYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIP-AIEWGKQTHCCIVKPGFDSNVVIG 417
EA+ L +L G P+ YT +++L +S +P + KQ H +K S+ +
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS 455
Query: 418 SALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIK 477
+AL+D Y++ + +A +F+ + +LV+WN M+ GY Q G + L+++++M + +
Sbjct: 456 TALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 478 PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYE 537
+D T V C + + +G I+ G + + ++ ++ G A
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQF 573
Query: 538 FIKSSPIEPNKVVWRCLLSGC 558
S P+ P+ V W ++SGC
Sbjct: 574 AFDSIPV-PDDVAWTTMISGC 593
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 191/416 (45%), Gaps = 37/416 (8%)
Query: 79 YVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASL 138
+ G + + D GK H R+ + N LI+MY KCG L+ A+ VFD
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 139 ERNSISWVSLLSSYCQCGEHV-----HGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
+R+ +SW S+L++Y Q E V +F + R+ V S + + +L C G +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGY 253
H K L+ D+FVA L+N+Y K K+ +F + D+ W+ ++ Y
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 254 AQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
++G EAIDL SSGL P+E+T + D + Q+ S SS +
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSD---AGQVKSFANGNDASSVS 278
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
+++ N ++ +L S Y ++ DM+
Sbjct: 279 -----------------------------EIIFRNKGLSEYLHSGQYSALLKCFADMVES 309
Query: 374 GHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDA 433
+ T+ +L + + ++ G+Q HC +K G D + + ++L++MY K + A
Sbjct: 310 DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFA 369
Query: 434 RKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSA 489
R VFD++S ++L+SWN+++ G AQ+GL EA+ ++ + +KP+ T VL A
Sbjct: 370 RTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVAL 61
I SG+ ++ + +L MYVK ++ AQ FD +P + ++W+ +ISG + G E A
Sbjct: 544 IKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAF 603
Query: 62 NYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMY 121
+ F M + P+ +T A + G++IH + + V L++MY
Sbjct: 604 HVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMY 663
Query: 122 GKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCA 181
KCG + A +F N +W ++L Q GE L++F + G+ + +
Sbjct: 664 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 182 SVLGACA 188
VL AC+
Sbjct: 724 GVLSACS 730
>sp|Q9LUC2|PP231_ARATH Pentatricopeptide repeat-containing protein At3g14730
OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1
Length = 653
Score = 341 bits (875), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 313/589 (53%), Gaps = 12/589 (2%)
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSG-LELNSHVSNCLINMYGKCGLLSSAQFV 133
N T + + CA R D SG++IHG M R G L+ + L+NMY KCGL+ A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 134 FDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNL 193
F S ER+ + +L+S + G + ++ + R +G+ +++ S+L + L
Sbjct: 119 FGGS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-EL 176
Query: 194 KVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL---TAWSALI 250
++H L FK + D +V GL+ Y+K ++ A +VF +LPD W+AL+
Sbjct: 177 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFD--ELPDRDDSVLWNALV 234
Query: 251 GGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFS 310
GY+Q+ + +A+ +F KM G+ S T + VL AF + GR +H L +K G
Sbjct: 235 NGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSG 294
Query: 311 SFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDM 370
S V+N ++D Y K + LEE+ F+ MDE D+ +WN+++ H + + L + M
Sbjct: 295 SDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERM 354
Query: 371 LFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF----DSNVVIGSALVDMYAK 426
L G P++ T + +L + ++ G++ H ++ G SN I ++L+DMY K
Sbjct: 355 LCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVK 414
Query: 427 CGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGV 486
CG L DAR VFD + K+ SWN M+ GY G AL+++S M +KP++ TF+G+
Sbjct: 415 CGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGL 474
Query: 487 LSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEP 546
L AC H G + EG ++ M + I P DH A V+ + + AYE S PI
Sbjct: 475 LQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICD 534
Query: 547 NKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRK 606
N VVWR +LS C+ H + L A +++ +PE ++++SNVY EA ++E VR
Sbjct: 535 NPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRD 594
Query: 607 IMKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
M+++++KK GCSW L+N +H F T + +H+ ++ + H+
Sbjct: 595 AMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHM 643
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 220/475 (46%), Gaps = 26/475 (5%)
Query: 1 MITSGF---HPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMP 57
M+ GF P T L+ MY K + A +F ER+V ++ALISGF G P
Sbjct: 86 MVRKGFLDDSPRAGT--SLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSP 142
Query: 58 EVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCL 117
A+ +R M + P+ YT+ + + + K++HG ++ G + + +V + L
Sbjct: 143 LDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSGL 201
Query: 118 INMYGKCGLLSSAQFVFDASLER-NSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAIS 176
+ Y K + AQ VFD +R +S+ W +L++ Y Q L +F R+ GV +S
Sbjct: 202 VTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVS 261
Query: 177 EFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFS 236
+ SVL A V G++ G IH L K D V+ LI++Y K + L+ A+ +F
Sbjct: 262 RHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFE 321
Query: 237 NIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIG 296
+ DL W++++ + G + LF +M SG+ P VT + VL +
Sbjct: 322 AMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQ 381
Query: 297 GRQLHSLIIKMGF----SSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
GR++H +I G SS F+ N+++D Y KC L ++ FD M D SWN +I
Sbjct: 382 GREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMIN 441
Query: 353 GH-LASCHYGE-AIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCI----- 405
G+ + SC GE A+++ M G P+ T+ +L S + G+ +
Sbjct: 442 GYGVQSC--GELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYN 499
Query: 406 VKPGFDSNVVIGSALVDMYAKCGRLNDARKV-FDHLSSKNLVSWNTMLVGYAQHG 459
+ P D + +DM + +L +A ++ N V W ++L HG
Sbjct: 500 ILPTSDHYACV----IDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHG 550
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 338 bits (866), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 345/654 (52%), Gaps = 26/654 (3%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
++ +N + Y++ R N+A ++F MP + +S++ +ISG+ + G E+A F M
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLS 128
L ++ + + G AR EI E + N +++ Y + G +
Sbjct: 123 ERDL-VSWNVMIKGYVRNRNLGKARELFEIMP-------ERDVCSWNTMLSGYAQNGCVD 174
Query: 129 SAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACA 188
A+ VFD E+N +SW +LLS+Y Q + +F S + A V C
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK---------SRENWALVSWNCL 225
Query: 189 VLGNLKVGMQIHSLVFKCALEFDKFVAMG-LINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ G +K + + F ++ V+ +I YA+ K+D A ++F + D+ W+
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWT 285
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
A++ GY Q EA +LF KM +EV+++ +L + + ++L ++
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCR 341
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
S++ NT++ Y++C + E+ FD+M + D VSW A+IAG+ S H EA+ L
Sbjct: 342 NVSTW----NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLF 397
Query: 368 KDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKC 427
M EG N ++S+ L+ +D+ A+E GKQ H +VK G+++ +G+AL+ MY KC
Sbjct: 398 VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 428 GRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVL 487
G + +A +F ++ K++VSWNTM+ GY++HG G AL + M+ +KP+D T + VL
Sbjct: 458 GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517
Query: 488 SACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPN 547
SAC H GLV++G YF +M +D+G+ P H A +V L G A+ +K+ P EP+
Sbjct: 518 SACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPD 577
Query: 548 KVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKI 607
+W LL + H + L AA+KI + +PE++ +++LSN+YA + W + K+R
Sbjct: 578 AAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVR 637
Query: 608 MKEKSLKKDTGCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYV 661
M++K +KK G SW E+QNK H FS + ++ + +L + + GYV
Sbjct: 638 MRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 691
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ G+ N LLLMY K I +A LF EM ++++SW+ +I+G+S+ G EVA
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLIN 119
L +F M L+P+ T V +SAC+ G G++ M + G+ NS C+++
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Query: 120 MYGKCGLLSSA-QFVFDASLERNSISWVSLLSSYCQCGEHVHGL---------KIFLLS- 168
+ G+ GLL A + + E ++ W +LL + VHG KIF +
Sbjct: 555 LLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA-----SRVHGNTELAETAADKIFAMEP 609
Query: 169 RKSGVAISEFSCASVLGACAVLGNLKVGMQ 198
SG+ + + + G +G L+V M+
Sbjct: 610 ENSGMYVLLSNLYASSGRWGDVGKLRVRMR 639
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 12/182 (6%)
Query: 324 SKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYS 383
++ ++ + K + + D+ WN I+ ++ + EA+ + K M P + S
Sbjct: 44 TQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRM------PRWSSVS 97
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
IS + E+ P + ++V + ++ Y + L AR++F+ + +
Sbjct: 98 YNGMISGYLRNGEFELARKLFDEMP--ERDLVSWNVMIKGYVRNRNLGKARELFEIMPER 155
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYF 503
++ SWNTML GYAQ+G +A ++ M E ND ++ +LSA V +EE F
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLF 211
Query: 504 NS 505
S
Sbjct: 212 KS 213
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 331 bits (849), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 197/612 (32%), Positives = 316/612 (51%), Gaps = 9/612 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ SG V LL +Y+K + AQ LFDEMPER+ + W+ALI G+S+ G A
Sbjct: 76 LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDA 135
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
F +M+ P+ T V + C G G+ +HG +SGLEL+S V N LI+
Sbjct: 136 WKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISF 195
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC L SA+ +F +++++SW +++ +Y Q G + +F + V IS +
Sbjct: 196 YSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTI 255
Query: 181 ASVLGACAVLGNLKVGMQ-IHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++L A V + +H LV KC + D V L+ Y++C L A R++++ +
Sbjct: 256 INLLSA-------HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAK 308
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQ 299
+ ++++ YA+ G A+ F K + V +L G
Sbjct: 309 QDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMS 368
Query: 300 LHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCH 359
LH IK G + T V N ++ YSK + +E L F+++ E ++SWN++I+G + S
Sbjct: 369 LHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGR 428
Query: 360 YGEAIELLKDMLFEGHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
A E+ M+ G P+ T +++L S + + GK+ H ++ F++ + +
Sbjct: 429 ASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCT 488
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAKCG A VF + + +WN+M+ GY+ GL AL Y M+E +KP
Sbjct: 489 ALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKP 548
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
++ TF+GVLSAC H G V+EG F +MI++ GISP + H A +V L A
Sbjct: 549 DEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYL 608
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
I I+P+ VW LLS C H++L +G Y A K+ D ++ ++++SN+YA MW
Sbjct: 609 IWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMW 668
Query: 599 DETAKVRKIMKE 610
D+ +VR +MK+
Sbjct: 669 DDVVRVRNMMKD 680
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 230/507 (45%), Gaps = 25/507 (4%)
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDA--RSGKEIHGRMYRSGLELNSHVSNCLI 118
+ FR ++ L PN++T + A + ++ +++ + +SGL+ +V L+
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 119 NMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
N+Y K G ++SAQ +FD ER+++ W +L+ Y + G K+F++ + G + S
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSAT 152
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
+ ++L C G + G +H + K LE D V LI+ Y+KC +L A +F +
Sbjct: 153 TLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREM 212
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ +W+ +IG Y+Q G EAI +F MF + S VT +L A +
Sbjct: 213 KDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAH------VSHE 266
Query: 299 QLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGH---- 354
LH L++K G + V +++ YS+C L + + + + +V ++++ +
Sbjct: 267 PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKG 326
Query: 355 ---LASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFD 411
+A ++ + +L + + IL+ I+ G H +K G
Sbjct: 327 DMDIAVVYFSKTRQLCMKI-------DAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLC 379
Query: 412 SNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIY-SM 470
+ ++ + L+ MY+K + +F+ L L+SWN+++ G Q G A E++ M
Sbjct: 380 TKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQM 439
Query: 471 MQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRG 530
M + P+ T +L+ C + + G +R++ + A ++ ++A G
Sbjct: 440 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTA-LIDMYAKCG 498
Query: 531 QTRRAYEFIKSSPIEPNKVVWRCLLSG 557
+A KS P W ++SG
Sbjct: 499 NEVQAESVFKSIK-APCTATWNSMISG 524
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 192/622 (30%), Positives = 323/622 (51%), Gaps = 4/622 (0%)
Query: 4 SGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNY 63
+G ++ L+ +Y F DA+ +FD++PE + W ++ + +
Sbjct: 70 NGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKL 129
Query: 64 FRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGK 123
+ L++ + + A+ AC D +GK+IH ++ + ++ V L++MY K
Sbjct: 130 YDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAK 188
Query: 124 CGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASV 183
CG + SA VF+ RN + W S+++ Y + GL +F R++ V +E++ ++
Sbjct: 189 CGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTL 248
Query: 184 LGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDL 243
+ AC L L G H + K +E + L+++Y KC + A RVF+ DL
Sbjct: 249 IMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDL 308
Query: 244 TAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSL 303
W+A+I GY G EA+ LF KM + P+ VT + VL ++ GR +H L
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL 368
Query: 304 IIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEA 363
IK+G T VAN ++ Y+KC ++ F+ E D+V+WN++I+G + EA
Sbjct: 369 SIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEA 427
Query: 364 IELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF--DSNVVIGSALV 421
+ L M E PN T +++ + + + ++ G H VK GF S+V +G+AL+
Sbjct: 428 LFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALL 487
Query: 422 DMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN 481
D YAKCG AR +FD + KN ++W+ M+ GY + G +LE++ M + + KPN++
Sbjct: 488 DFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNES 547
Query: 482 TFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKS 541
TF +LSAC H G+V EG YF+SM +D+ +P H +V + A G+ +A + I+
Sbjct: 548 TFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEK 607
Query: 542 SPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDET 601
PI+P+ + L GC H LG +K+L P+D S ++++SN+YA W++
Sbjct: 608 MPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQA 667
Query: 602 AKVRKIMKEKSLKKDTGCSWTE 623
+VR +MK++ L K G S E
Sbjct: 668 KEVRNLMKQRGLSKIAGHSTME 689
Score = 209 bits (531), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 236/471 (50%), Gaps = 4/471 (0%)
Query: 96 KEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQC 155
++ HG + +GL + ++ L+++YG G A+ VFD E + W +L YC
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 156 GEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVA 215
E V +K++ L K G + + L AC L +L G +IH + K FD V
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVL 179
Query: 216 MGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLM 275
GL+++YAKC ++ A +VF++I L ++ W+++I GY + E + LF +M + ++
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 276 PSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKT 335
+E T+ ++ A + G+ H ++K G + + ++LD Y KC + + +
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 336 FDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAI 395
F+E D+V W A+I G+ + EA+ L + M PN T +++L+ I +
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENL 359
Query: 396 EWGKQTHCCIVKPG-FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
E G+ H +K G +D+NV +ALV MYAKC + DA+ VF+ S K++V+WN+++ G
Sbjct: 360 ELGRSVHGLSIKVGIWDTNV--ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISG 417
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
++Q+G EAL ++ M + PN T + SAC +G + G ++ ++
Sbjct: 418 FSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLAS 477
Query: 515 RMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLV 565
H+ + + F + ++ I + E N + W ++ G D +
Sbjct: 478 SSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTI 528
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 181/357 (50%), Gaps = 5/357 (1%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG + LL MYVK I++A+++F+E +++ W+A+I G++ G A
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 327
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L+ F+ M ++PN T +S C + G+ +HG + G+ +++V+N L++M
Sbjct: 328 LSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHM 386
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KC A++VF+ E++ ++W S++S + Q G L +F V + +
Sbjct: 387 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTV 446
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMG--LINLYAKCEKLDLASRVFSNI 238
AS+ ACA LG+L VG +H+ K V +G L++ YAKC A +F I
Sbjct: 447 ASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTI 506
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGR 298
+ + WSA+IGGY + G +++LF +M P+E TF+ +L A G+
Sbjct: 507 EEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGK 566
Query: 299 QLHSLIIK-MGFSSFTFVANTVLDFYSKCELLEESLKTFDEMD-EHDVVSWNALIAG 353
+ S + K F+ T ++D ++ LE++L ++M + DV + A + G
Sbjct: 567 KYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 623
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 194/582 (33%), Positives = 292/582 (50%), Gaps = 19/582 (3%)
Query: 93 RSGKEIHGRMYRSGLELNS----HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSL 148
R G+ +H R+ ++ L+S ++N LINMY K SA+ V + RN +SW SL
Sbjct: 23 RLGRVVHARIVKT---LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSL 79
Query: 149 LSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCAL 208
+S Q G L F R+ GV ++F+ A A L G QIH+L KC
Sbjct: 80 ISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGR 139
Query: 209 EFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVK 268
D FV ++Y K D A ++F I +L W+A I G+ EAI+ F++
Sbjct: 140 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE 199
Query: 269 MFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCEL 328
P+ +TF L A +D G QLH L+++ GF + V N ++DFY KC+
Sbjct: 200 FRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQ 259
Query: 329 LEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL-----KDMLFEGHCPNLYTYS 383
+ S F EM + VSW +L+A ++ + H E +L KD++ + S
Sbjct: 260 IRSSEIIFTEMGTKNAVSWCSLVAAYVQN-HEDEKASVLYLRSRKDIVETSD----FMIS 314
Query: 384 NILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSK 443
++L+ + + +E G+ H VK + + +GSALVDMY KCG + D+ + FD + K
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 444 NLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDN--TFIGVLSACVHIGLVEEGWH 501
NLV+ N+++ GYA G AL ++ M P N TF+ +LSAC G VE G
Sbjct: 375 NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMK 434
Query: 502 YFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTH 561
F+SM +GI P +H + +V + G RAYEFIK PI+P VW L + C+ H
Sbjct: 435 IFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH 494
Query: 562 KDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSW 621
LG AAE + DP+D+ H++LSN +A A W E VR+ +K +KK G SW
Sbjct: 495 GKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSW 554
Query: 622 TELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHLFDGGYVPD 663
++N++H F + ++ + +L + GY PD
Sbjct: 555 ITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPD 596
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 228/482 (47%), Gaps = 14/482 (2%)
Query: 8 PNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLM 67
P N+L+ MY K A+ + P RNV+SW++LISG +Q G AL F M
Sbjct: 40 PPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEM 99
Query: 68 VCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLL 127
+ PN +T+ A A AS +GK+IH + G L+ V +MY K L
Sbjct: 100 RREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 159
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
A+ +FD ERN +W + +S+ G ++ F+ R+ + + + L AC
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Query: 188 AVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWS 247
+ +L +GMQ+H LV + + D V GLI+ Y KC+++ + +F+ + + +W
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279
Query: 248 ALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKM 307
+L+ Y Q + +A L+++ + S+ S VL A A + GR +H+ +K
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 308 GFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELL 367
FV + ++D Y KC +E+S + FDEM E ++V+ N+LI G+ A+ L
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399
Query: 368 KDMLFE--GHCPNLYTYSNILNISSDIPAIEWGKQTHCCI-----VKPGFDSNVVIGSAL 420
++M G PN T+ ++L+ S A+E G + + ++PG + S +
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHY----SCI 455
Query: 421 VDMYAKCGRLNDARKVFDHLSSKNLVS-WNTMLVGYAQHGLGREALEIYSMMQENKIKPN 479
VDM + G + A + + + +S W + H G+ L + + K+ P
Sbjct: 456 VDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH--GKPQLGLLAAENLFKLDPK 513
Query: 480 DN 481
D+
Sbjct: 514 DS 515
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 125/266 (46%), Gaps = 9/266 (3%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SGF +V N L+ Y K +I ++ +F EM +N +SW +L++ + Q E A
Sbjct: 235 VLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA 294
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
+ ++E + + +SACA G+ IH ++ +E V + L++M
Sbjct: 295 SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 354
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIF--LLSRKSGVAISEF 178
YGKCG + ++ FD E+N ++ SL+ Y G+ L +F + R G +
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 179 SCASVLGACAVLGNLKVGMQI-HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ S+L AC+ G ++ GM+I S+ +E ++++ + ++ A
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKK 474
Query: 238 IQL-PDLTAWSAL-----IGGYAQLG 257
+ + P ++ W AL + G QLG
Sbjct: 475 MPIQPTISVWGALQNACRMHGKPQLG 500
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 330 bits (846), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 194/638 (30%), Positives = 327/638 (51%), Gaps = 4/638 (0%)
Query: 22 KFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVG 81
KFS DA+++F EM +R++ W+ L+ S+ E L +F M +P+ +T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 82 AVSACASRGDARSGKEIHGRMYRS-GLELNSHVSNCLINMYGKCGLLSSAQFVFDASLER 140
A+ AC + G+ IHG + + L + +V + LI MY KCG + A +FD +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 141 NSISWVSLLSSYCQCGEHVHGLKIFL-LSRKSGVAISEFSCASVLGACAVLGNLKVGMQI 199
+ ++W S++S + + G ++ F + S V + +++ AC L N ++G +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 200 HSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGKA 259
H V + D + L+N YAK A +F I D+ +WS +I Y Q G A
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 260 CEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTV 319
EA+ +F M G P+ T VL A A + GR+ H L I+ G + V+ +
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 320 LDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHC-PN 378
+D Y KC EE+ F + DVVSW ALI+G + +IE ML E + P+
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 365
Query: 379 LYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFD 438
+L S++ +E K H ++K GFDSN IG++LV++Y++CG L +A KVF+
Sbjct: 366 AILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 425
Query: 439 HLSSKNLVSWNTMLVGYAQHGLGREALEIYS-MMQENKIKPNDNTFIGVLSACVHIGLVE 497
++ K+ V W +++ GY HG G +ALE ++ M++ +++KPN+ TF+ +LSAC H GL+
Sbjct: 426 GIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIH 485
Query: 498 EGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSG 557
EG F M+ D+ ++P ++H A +V L G A E K P P + LL
Sbjct: 486 EGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGA 545
Query: 558 CKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMWDETAKVRKIMKEKSLKKDT 617
C+ H++ + A+K+ + ++++SNVY W+ K+R +K++ +KK
Sbjct: 546 CRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGL 605
Query: 618 GCSWTELQNKMHYFSTSRFAQFQGIDLHEVMNQLSVHL 655
S E++ K+H F + ++ ++ +L +H+
Sbjct: 606 AESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHM 643
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 226/446 (50%), Gaps = 8/446 (1%)
Query: 122 GKCGLLSS---AQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEF 178
G C SS A+ +F +R+ W +LL S + + L F + F
Sbjct: 2 GFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNF 61
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFK-CALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
+ L AC L + G IH V K L D +V LI +Y KC ++ A R+F
Sbjct: 62 TLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKM-FSSGLMPSEVTFSYVLGAFADVKETIG 296
++ PD+ WS+++ G+ + G +A++ F +M +S + P VT ++ A + +
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRL 181
Query: 297 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 356
GR +H +I+ GFS+ + N++L+ Y+K +E++ F + E DV+SW+ +IA ++
Sbjct: 182 GRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ 241
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVI 416
+ EA+ + DM+ +G PN+ T +L + +E G++TH ++ G ++ V +
Sbjct: 242 NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKV 301
Query: 417 GSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS-MMQENK 475
+ALVDMY KC +A VF + K++VSW ++ G+ +G+ ++E +S M+ EN
Sbjct: 302 STALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENN 361
Query: 476 IKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
+P+ + VL +C +G +E+ F+S + +G AS+V L++ G A
Sbjct: 362 TRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 536 YEFIKSSPIEPNKVVWRCLLSGCKTH 561
+ ++ + VVW L++G H
Sbjct: 421 SKVFNGIALK-DTVVWTSLITGYGIH 445
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 214/425 (50%), Gaps = 4/425 (0%)
Query: 16 LLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMVCCV-LEP 74
L+ MY+K R+ +A ++FDE+ + ++++WS+++SGF + G P A+ +FR MV + P
Sbjct: 102 LIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP 161
Query: 75 NYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVF 134
+ T + VSAC ++R G+ +HG + R G + + N L+N Y K A +F
Sbjct: 162 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 221
Query: 135 DASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLK 194
E++ ISW ++++ Y Q G L +F G + + VL ACA +L+
Sbjct: 222 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 281
Query: 195 VGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYA 254
G + H L + LE + V+ L+++Y KC + A VFS I D+ +W ALI G+
Sbjct: 282 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT 341
Query: 255 QLGKACEAIDLF-VKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFT 313
G A +I+ F + + + P + VLG+ +++ + HS +IK GF S
Sbjct: 342 LNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 401
Query: 314 FVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFE 373
F+ ++++ YS+C L + K F+ + D V W +LI G+ +A+E M+
Sbjct: 402 FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS 461
Query: 374 GHC-PNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVIGSALVDMYAKCGRLN 431
PN T+ +IL+ S I G + +V N+ + LVD+ + G L+
Sbjct: 462 SEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 521
Query: 432 DARKV 436
A ++
Sbjct: 522 TAIEI 526
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 148/294 (50%), Gaps = 12/294 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+I GF ++ N LL Y K +A LF + E++VISWS +I+ + Q G A
Sbjct: 189 VIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEA 248
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F M+ EPN T + + ACA+ D G++ H R GLE VS L++M
Sbjct: 249 LLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 308
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG---EHVHGLKIFLL---SRKSGVA 174
Y KC A VF ++ +SWV+L+S + G + I LL +R +
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 368
Query: 175 ISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRV 234
+ VLG+C+ LG L+ HS V K + + F+ L+ LY++C L AS+V
Sbjct: 369 M-----VKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 423
Query: 235 FSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMF-SSGLMPSEVTFSYVLGA 287
F+ I L D W++LI GY GK +A++ F M SS + P+EVTF +L A
Sbjct: 424 FNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSA 477
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 329 bits (843), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 196/640 (30%), Positives = 326/640 (50%), Gaps = 18/640 (2%)
Query: 3 TSGFHPNVIT----YNHLL----LMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQI 54
T H +VIT H+L + Y I A+KLF+EMP+ +++S++ +I + +
Sbjct: 34 TKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVRE 93
Query: 55 GMPEVALNYFRLMVC----CVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELN 110
G+ A++ F MV CV P+ YTY A + G +HGR+ RS +
Sbjct: 94 GLYHDAISVFIRMVSEGVKCV--PDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRD 151
Query: 111 SHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRK 170
+V N L+ MY G + A+ VFD R+ ISW +++S Y + G L +F
Sbjct: 152 KYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN 211
Query: 171 SGVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDL 230
V + + S+L C L +L++G +H LV + L V L+N+Y KC ++D
Sbjct: 212 ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDE 271
Query: 231 ASRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFAD 290
A VF ++ D+ W+ +I GY + G A++L M G+ P+ VT + ++ D
Sbjct: 272 ARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGD 331
Query: 291 VKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNAL 350
+ G+ LH ++ S + +++ Y+KC+ ++ + F ++ W+A+
Sbjct: 332 ALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAI 391
Query: 351 IAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGF 410
IAG + + +A+ L K M E PN+ T +++L + + + HC + K GF
Sbjct: 392 IAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGF 451
Query: 411 DSNVVIGSALVDMYAKCGRLNDARKVFDHLS----SKNLVSWNTMLVGYAQHGLGREALE 466
S++ + LV +Y+KCG L A K+F+ + SK++V W ++ GY HG G AL+
Sbjct: 452 MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQ 511
Query: 467 IYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLF 526
++ M + + PN+ TF L+AC H GLVEEG F M+ + R +H +V L
Sbjct: 512 VFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLL 571
Query: 527 ACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHI 586
G+ AY I + P EP VW LL+ C TH+++ LG AA K+ +PE+T ++
Sbjct: 572 GRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYV 631
Query: 587 MLSNVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQN 626
+L+N+YA W + KVR +M+ L+K G S E+++
Sbjct: 632 LLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 218/440 (49%), Gaps = 9/440 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ S F + N LL MY+ F ++ A+ +FD M R+VISW+ +ISG+ + G A
Sbjct: 143 ILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDA 202
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
L F MV ++ ++ T V + C D G+ +H + L V N L+NM
Sbjct: 203 LMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNM 262
Query: 121 YGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSC 180
Y KCG + A+FVFD R+ I+W +++ Y + G+ + L++ L + GV + +
Sbjct: 263 YLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTI 322
Query: 181 ASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQL 240
AS++ C + G +H + + D + LI++YAKC+++DL RVFS
Sbjct: 323 ASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASK 382
Query: 241 PDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQL 300
WSA+I G Q +A+ LF +M + P+ T + +L A+A + + +
Sbjct: 383 YHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNI 442
Query: 301 HSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDE----HDVVSWNALIAGHLA 356
H + K GF S A ++ YSKC LE + K F+ + E DVV W ALI+G+
Sbjct: 443 HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGM 502
Query: 357 SCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIV---KPGFDSN 413
A+++ +M+ G PN T+++ LN S +E G ++ K SN
Sbjct: 503 HGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSN 562
Query: 414 VVIGSALVDMYAKCGRLNDA 433
+ +VD+ + GRL++A
Sbjct: 563 HY--TCIVDLLGRAGRLDEA 580
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 328 bits (842), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 191/626 (30%), Positives = 336/626 (53%), Gaps = 14/626 (2%)
Query: 3 TSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALN 62
TSGF V N ++ MY K R ++A +F+ + + +V+SW+ ++SGF ++ALN
Sbjct: 104 TSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD---NQIALN 160
Query: 63 YFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYG 122
+ M + + +TY A+S C G ++ + ++GLE + V N I MY
Sbjct: 161 FVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYS 220
Query: 123 KCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEH-VHGLKIFLLSRKSGVAISEFSCA 181
+ G A+ VFD ++ ISW SLLS Q G + IF + GV + S
Sbjct: 221 RSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFT 280
Query: 182 SVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLP 241
SV+ C +LK+ QIH L K E V L++ Y+KC L+ VF +
Sbjct: 281 SVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER 340
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLH 301
++ +W+ +I +A+ +F+ M G+ P+EVTF ++ A ++ G ++H
Sbjct: 341 NVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIH 395
Query: 302 SLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYG 361
L IK GF S V N+ + Y+K E LE++ K F+++ +++SWNA+I+G +
Sbjct: 396 GLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSH 455
Query: 362 EAIELLKDMLFEGHCPNLYTYSNILN---ISSDIPAIEWGKQTHCCIVKPGFDSNVVIGS 418
EA+++ E PN YT+ ++LN + DI +++ G++ H ++K G +S V+ S
Sbjct: 456 EALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDI-SVKQGQRCHAHLLKLGLNSCPVVSS 513
Query: 419 ALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKP 478
AL+DMYAK G ++++ KVF+ +S KN W +++ Y+ HG + ++ M + + P
Sbjct: 514 ALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAP 573
Query: 479 NDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEF 538
+ TF+ VL+AC G+V++G+ FN MI + + P +H + +V + G+ + A E
Sbjct: 574 DLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEEL 633
Query: 539 IKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLSNVYAEANMW 598
+ P P + + + +L C+ H ++ +G AE + PE + +++ + N+YAE W
Sbjct: 634 MSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEW 693
Query: 599 DETAKVRKIMKEKSLKKDTGCSWTEL 624
D+ A++RK M++K++ K+ G SW ++
Sbjct: 694 DKAAEIRKAMRKKNVSKEAGFSWIDV 719
Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 156/545 (28%), Positives = 271/545 (49%), Gaps = 24/545 (4%)
Query: 29 AQKLFDEMPERN-VISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYY-TYVGAVSAC 86
A KLFD +RN S + IS + P AL+ F+ L+ Y+ ++ V+ C
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKEN----LQLGYFGRHMDEVTLC 82
Query: 87 ----ASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNS 142
A RGD + G +IHG SG VSN ++ MY K G +A +F+ ++ +
Sbjct: 83 LALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDV 142
Query: 143 ISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGACAVLGNLKVGMQIHSL 202
+SW ++LS + ++ L + + +GV F+ ++ L C +G+Q+ S
Sbjct: 143 VSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQST 199
Query: 203 VFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIGGYAQLGK-ACE 261
V K LE D V I +Y++ A RVF + D+ +W++L+ G +Q G E
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 262 AIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLD 321
A+ +F M G+ V+F+ V+ + RQ+H L IK G+ S V N ++
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 322 FYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYT 381
YSKC +LE F +M E +VVSW +I S + +A+ + +M F+G PN T
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVT 374
Query: 382 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 441
+ ++N I+ G + H +K GF S +G++ + +YAK L DA+K F+ ++
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 442 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIG--LVEEG 499
+ ++SWN M+ G+AQ+G EAL+++ + + PN+ TF VL+A V++G
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMF-LSAAAETMPNEYTFGSVLNAIAFAEDISVKQG 493
Query: 500 WHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRAYEFIKSSPIEPNKVVWRCLLSGCK 559
+++ G++ ++++ ++A RG + E + + + N+ VW ++S
Sbjct: 494 QRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNIDES-EKVFNEMSQKNQFVWTSIISAYS 551
Query: 560 THKDL 564
+H D
Sbjct: 552 SHGDF 556
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 234/444 (52%), Gaps = 10/444 (2%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEV- 59
++ +G +++ N + MY + A+++FDEM +++ISW++L+SG SQ G
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 60 ALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLIN 119
A+ FR M+ +E ++ ++ ++ C D + ++IHG + G E V N L++
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 120 MYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFS 179
Y KCG+L + + VF ERN +SW +++SS + IFL R GV +E +
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVT 374
Query: 180 CASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQ 239
++ A +K G++IH L K + V I LYAK E L+ A + F +I
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 240 LPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLG--AFADVKETIGG 297
++ +W+A+I G+AQ G + EA+ +F+ ++ MP+E TF VL AFA+ G
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQG 493
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
++ H+ ++K+G +S V++ +LD Y+K ++ES K F+EM + + W ++I+ + +
Sbjct: 494 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSH 553
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKP-GFDSNVVI 416
+ + L M+ E P+L T+ ++L + ++ G + +++ + +
Sbjct: 554 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEH 613
Query: 417 GSALVDMYAKCGRLNDARKVFDHL 440
S +VDM + GRL +A ++ +
Sbjct: 614 YSCMVDMLGRAGRLKEAEELMSEV 637
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 328 bits (841), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 195/639 (30%), Positives = 328/639 (51%), Gaps = 47/639 (7%)
Query: 2 ITSGFHPNVITYNHLLLMYVKFSRIND-AQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
+ +G N+ N LL MY K I D ++F+ + + N +S++A+I G ++ A
Sbjct: 165 VKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEA 224
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARS---------GKEIHGRMYRSGLELNS 111
+ FRLM ++ + +S A R S GK+IH R G +
Sbjct: 225 VQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDL 284
Query: 112 HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKS 171
H++N L+ +Y K ++ A+ +F E N +SW ++ + Q ++ R S
Sbjct: 285 HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDS 344
Query: 172 GVAISEFSCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLA 231
G +E +C SVLGAC G+++ G
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETG----------------------------------- 369
Query: 232 SRVFSNIQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADV 291
R+FS+I P ++AW+A++ GY+ EAI F +M L P + T S +L + A +
Sbjct: 370 RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARL 429
Query: 292 KETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDE-MDEHDVVSWNAL 350
+ GG+Q+H ++I+ S + + + ++ YS+CE +E S FD+ ++E D+ WN++
Sbjct: 430 RFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSM 489
Query: 351 IAGHLASCHYGEAIELLKDMLFEG-HCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPG 409
I+G + +A+ L + M CPN +++ +L+ S + ++ G+Q H +VK G
Sbjct: 490 ISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSG 549
Query: 410 FDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYS 469
+ S+ + +AL DMY KCG ++ AR+ FD + KN V WN M+ GY +G G EA+ +Y
Sbjct: 550 YVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYR 609
Query: 470 MMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACR 529
M + KP+ TF+ VL+AC H GLVE G +SM R HGI P +DH +V
Sbjct: 610 KMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRA 669
Query: 530 GQTRRAYEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAAEKILSTDPEDTSAHIMLS 589
G+ A + +++P + + V+W LLS C+ H D+ L R AEK++ DP+ ++A+++LS
Sbjct: 670 GRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLS 729
Query: 590 NVYAEANMWDETAKVRKIMKEKSLKKDTGCSWTELQNKM 628
N Y+ WD++A ++ +M + + K G SWT N +
Sbjct: 730 NTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/562 (25%), Positives = 271/562 (48%), Gaps = 51/562 (9%)
Query: 9 NVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVALNYFRLMV 68
+V ++N L K + +A ++FD MPER+V+SW+ +IS + G E AL ++ MV
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 69 CCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKCG-LL 127
C P+ +T +SAC+ D G HG ++GL+ N V N L++MY KCG ++
Sbjct: 131 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV 190
Query: 128 SSAQFVFDASLERNSISWVSLLSSYCQCGEHVHGLKIFLLSRKSGVAISEFSCASVLGAC 187
VF++ + N +S+ +++ + + + +++F L + GV + +++L
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 250
Query: 188 A----------VLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSN 237
A + GN ++G QIH L + D + L+ +YAK + ++ A +F+
Sbjct: 251 APREGCDSLSEIYGN-ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAE 309
Query: 238 IQLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFADVKETIGG 297
+ ++ +W+ +I G+ Q ++ ++++ +M SG P+EVT VLGA + G
Sbjct: 310 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG 369
Query: 298 RQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLAS 357
R++ S I + S++ N +L YS E
Sbjct: 370 RRIFSSIPQPSVSAW----NAMLSGYSNYE------------------------------ 395
Query: 358 CHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIG 417
HY EAI + M F+ P+ T S IL+ + + +E GKQ H +++ N I
Sbjct: 396 -HYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIV 454
Query: 418 SALVDMYAKCGRLNDARKVFDH-LSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKI 476
S L+ +Y++C ++ + +FD ++ ++ WN+M+ G+ + L +AL ++ M + +
Sbjct: 455 SGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAV 514
Query: 477 K-PNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISPRMDHIASVVHLFACRGQTRRA 535
PN+ +F VLS+C + + G + +++ +S A + ++ G+ A
Sbjct: 515 LCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETA-LTDMYCKCGEIDSA 573
Query: 536 YEFIKSSPIEPNKVVWRCLLSG 557
+F + + N V+W ++ G
Sbjct: 574 RQFF-DAVLRKNTVIWNEMIHG 594
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 209/456 (45%), Gaps = 76/456 (16%)
Query: 94 SGKEIHGRMYRSGLELNSHVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYC 153
SGK IHG + R G++ ++++ N L+++Y +CG A+ VFD R+ SW + L+ C
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 154 QCGEHVHGLKIF----------------LLSRK---------------SGVAISEFSCAS 182
+ G+ ++F +L RK G S F+ AS
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 183 VLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKL-DLASRVFSNIQLP 241
VL AC+ + + GM+ H + K L+ + FV L+++YAKC + D RVF ++ P
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 242 DLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGAFA------DVKETI 295
+ +++A+IGG A+ K EA+ +F M G+ V S +L A + E
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 296 G---GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIA 352
G G+Q+H L +++GF + N++L+ Y+K + + + F EM E +VVSWN +I
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 353 GHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDS 412
G +++E L M G PN T CI
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVT----------------------CI------- 354
Query: 413 NVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQ 472
V+G+ + G + R++F + ++ +WN ML GY+ + EA+ + MQ
Sbjct: 355 -SVLGACF-----RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Query: 473 ENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIR 508
+KP+ T +LS+C + +E G +IR
Sbjct: 409 FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 213/445 (47%), Gaps = 52/445 (11%)
Query: 196 GMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNIQLPDLTAWSALIG---G 252
G IH + + ++ D ++ L++LY +C D A +VF + + D+ +W+A +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 253 YAQLGKACEAID----------------------------LFVKMFSSGLMPSEVTFSYV 284
LG+ACE D ++ +M G +PS T + V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 285 LGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCE-LLEESLKTFDEMDEHD 343
L A + V + + G + H + +K G FV N +L Y+KC +++ ++ F+ + + +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 344 VVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNIS---------SDIPA 394
VS+ A+I G EA+++ + M +G + SNIL+IS S+I
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 395 IEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVG 454
E GKQ HC ++ GF ++ + ++L+++YAK +N A +F + N+VSWN M+VG
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 455 YAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHIGLVEEGWHYFNSMIRDHGISP 514
+ Q +++E + M+++ +PN+ T I VL AC G VE G F+S+ + P
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----P 379
Query: 515 RMDHIASVVHLFACRGQTRRA---YEFIKSSPIEPNKVVWRCLLSGCKTHKDLVLGRYAA 571
+ +++ ++ A + ++ ++P+K +LS C + L G+
Sbjct: 380 SVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIH 439
Query: 572 EKILSTDPEDTSAHIM--LSNVYAE 594
++ T+ S HI+ L VY+E
Sbjct: 440 GVVIRTEISKNS-HIVSGLIAVYSE 463
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 151/289 (52%), Gaps = 2/289 (0%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
M SGF PN +T +L + + +++F +P+ +V +W+A++SG+S E A
Sbjct: 341 MRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEA 400
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINM 120
++ FR M L+P+ T +S+CA GK+IHG + R+ + NSH+ + LI +
Sbjct: 401 ISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAV 460
Query: 121 YGKCGLLSSAQFVFDASLERNSIS-WVSLLSSYCQCGEHVHGLKIFLLSRKSGVAI-SEF 178
Y +C + ++ +FD + I+ W S++S + L +F ++ V +E
Sbjct: 461 YSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET 520
Query: 179 SCASVLGACAVLGNLKVGMQIHSLVFKCALEFDKFVAMGLINLYAKCEKLDLASRVFSNI 238
S A+VL +C+ L +L G Q H LV K D FV L ++Y KC ++D A + F +
Sbjct: 521 SFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV 580
Query: 239 QLPDLTAWSALIGGYAQLGKACEAIDLFVKMFSSGLMPSEVTFSYVLGA 287
+ W+ +I GY G+ EA+ L+ KM SSG P +TF VL A
Sbjct: 581 LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTA 629
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 180/409 (44%), Gaps = 81/409 (19%)
Query: 284 VLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHD 343
+L + D + + G+ +H I++MG S T++ N +LD Y +C + + K FDEM D
Sbjct: 12 LLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRD 71
Query: 344 VVSWNALIAGHLASCHYGEAIELL-------------------------------KDMLF 372
V SWNA + GEA E+ K M+
Sbjct: 72 VYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVC 131
Query: 373 EGHCPNLYTYSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLND 432
+G P+ +T +++L+ S + +G + H VK G D N+ +G+AL+ MYAKCG + D
Sbjct: 132 DGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVD 191
Query: 433 -ARKVFDHLSSKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLS--- 488
+VF+ LS N VS+ ++ G A+ EA++++ +M E ++ + +LS
Sbjct: 192 YGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISA 251
Query: 489 ---AC--------------VHIGLVEEGW----HYFNSMIRDHGISPRMD---------- 517
C +H + G+ H NS++ + + M+
Sbjct: 252 PREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMP 311
Query: 518 --HIASVVHLFACRGQTRR---AYEFI---KSSPIEPNKVVWRCLLSGCKTHKDLVLGRY 569
++ S + GQ R + EF+ + S +PN+V +L C D+ GR
Sbjct: 312 EVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR- 370
Query: 570 AAEKILSTDPEDTSA--HIMLSNVYAEANMWDETAKVRKIMKEKSLKKD 616
+I S+ P+ + + + MLS Y+ ++E + M+ ++LK D
Sbjct: 371 ---RIFSSIPQPSVSAWNAMLSG-YSNYEHYEEAISNFRQMQFQNLKPD 415
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Query: 1 MITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQIGMPEVA 60
++ SG+ + L MY K I+ A++ FD + +N + W+ +I G+ G + A
Sbjct: 545 VVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEA 604
Query: 61 LNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYR-SGLELNSHVSNCLIN 119
+ +R M+ +P+ T+V ++AC+ G +G EI M R G+E C+++
Sbjct: 605 VGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVD 664
Query: 120 MYGKCGLLSSAQFVFDAS-LERNSISWVSLLSSYCQCGEHVHG 161
G+ G L A+ + +A+ + +S+ W LLSS C+ VHG
Sbjct: 665 CLGRAGRLEDAEKLAEATPYKSSSVLWEILLSS-CR----VHG 702
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 246,542,260
Number of Sequences: 539616
Number of extensions: 10153878
Number of successful extensions: 32513
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 22167
Number of HSP's gapped (non-prelim): 2866
length of query: 672
length of database: 191,569,459
effective HSP length: 124
effective length of query: 548
effective length of database: 124,657,075
effective search space: 68312077100
effective search space used: 68312077100
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)