BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005882
(672 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ZYQ|A Chain A, Crystal Structure Of The Tandem Vhs And Fyve Domains Of
Hepatocyte Growth Factor-Regulated Tyrosine Kinase
Substrate (Hgs-Hrs) At 1.48 A Resolution
pdb|4AVX|A Chain A, Hepatocyte Growth Factor-Regulated Tyrosine Kinase
Substrate (Hgs-Hrs) Bound To An Ip2 Compound At 1.68 A
Resolution
Length = 226
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 68/109 (62%)
Query: 5 MVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLET 64
++D+ATS +L+ DW ++ICD++ QAK V IKK++ +N V L AL ++E+
Sbjct: 12 LLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMES 71
Query: 65 IIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 113
++KNCG VH VA K + E+ + +++ + +V+ KIL LI W AF
Sbjct: 72 VVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAF 120
>pdb|1ELK|A Chain A, Vhs Domain Of Tom1 Protein From H. Sapiens
pdb|1ELK|B Chain B, Vhs Domain Of Tom1 Protein From H. Sapiens
Length = 157
Score = 87.4 bits (215), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/116 (38%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
Query: 2 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRI-GSRNSKVQLLALT 60
V +++AT L DWA+N+EICD++N KD ++ +KKRI G++N +LALT
Sbjct: 17 VGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALT 76
Query: 61 LLETIIKNCGDIVHMHVAEKNVLHEMVK---IARKKPDTHVKEKILILIDTWQEAF 113
+LET +KNCG H+ VA ++ + ++ + + P T V +K+L LI +W +AF
Sbjct: 77 VLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWADAF 132
>pdb|1X5B|A Chain A, The Solution Structure Of The Vhs Domain Of Human Signal
Transducing Adaptor Molecule 2
pdb|2L0T|B Chain B, Solution Structure Of The Complex Of Ubiquitin And The Vhs
Domain Of Stam2
Length = 163
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 59/108 (54%)
Query: 6 VDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETI 65
V++AT++ DW++ ++ICD + P AKD +K I KR+ + V L ALTLL
Sbjct: 20 VEKATNEYNTTEDWSLIMDICDKVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGAC 79
Query: 66 IKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 113
+ NCG I H+ V ++ E+ + + K V EK+ L+ W E F
Sbjct: 80 VANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSEEF 127
>pdb|1DVP|A Chain A, Crystal Structure Of The Vhs And Fyve Tandem Domains Of
Hrs, A Protein Involved In Membrane Trafficking And
Signal Transduction
Length = 220
Score = 72.4 bits (176), Expect = 7e-13, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 6 VDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETI 65
++ ATS + + PDW + ICD +N K+ IKK++ S N +L +LE+I
Sbjct: 10 LENATSHLRLEPDWPSILLICDEINQKDVTPKNAFAAIKKKMNSPNPHSSCYSLLVLESI 69
Query: 66 IKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAFGGXXXXXXXXXX 125
+KNCG VH V K P +V++K+L L+ TW AF
Sbjct: 70 VKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWAYAF--RSSDKYQAIK 127
Query: 126 XXXELLRA-GAVFPQRSERSAPVFT 149
+L+A G FP+ E A +FT
Sbjct: 128 DTMTILKAKGHTFPELREADA-MFT 151
>pdb|3LDZ|A Chain A, Crystal Structure Of Human Stam1 Vhs Domain In Complex
With Ubiquitin
pdb|3LDZ|D Chain D, Crystal Structure Of Human Stam1 Vhs Domain In Complex
With Ubiquitin
pdb|3LDZ|B Chain B, Crystal Structure Of Human Stam1 Vhs Domain In Complex
With Ubiquitin
pdb|3LDZ|C Chain C, Crystal Structure Of Human Stam1 Vhs Domain In Complex
With Ubiquitin
Length = 140
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 6 VDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETI 65
V++ATS+M DW + ++ICD + KD ++ I +R+ ++ V + ALTLL
Sbjct: 10 VEKATSEMNTAEDWGLILDICDKVGQSRTGPKDCLRSIMRRVNHKDPHVAMQALTLLGAC 69
Query: 66 IKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 113
+ NCG I H+ V ++ E+ + K V EK+ L+ W + F
Sbjct: 70 VSNCGKIFHLEVCSRDFASEVSNVLNKG-HPKVCEKLKALMVEWTDEF 116
>pdb|3RRU|A Chain A, X-Ray Crystal Structure Of The Vhs Domain Of Human
Tom1-Like Protein, Northeast Structural Genomics
Consortium Target Hr3050e
pdb|3RRU|B Chain B, X-Ray Crystal Structure Of The Vhs Domain Of Human
Tom1-Like Protein, Northeast Structural Genomics
Consortium Target Hr3050e
Length = 152
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 2 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSR-NSKVQLLALT 60
V ++++AT + DW ICD++N KD VK +KKRI N K L L+
Sbjct: 17 VGHLIEKATFAGVQTEDWGQFXHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLS 76
Query: 61 LLETIIKNCGDIVHMHVAEKNVLHE-MVKI--ARKKPDTHVKEKILILIDTWQEAFGG 115
L++ ++NCG + +K + E +VK+ R ++ +IL I TW + F G
Sbjct: 77 LIDXCVQNCGPSFQSLIVKKEFVKENLVKLLNPRYNLPLDIQNRILNFIKTWSQGFPG 134
>pdb|1WRD|A Chain A, Crystal Structure Of Tom1 Gat Domain In Complex With
Ubiquitin
Length = 103
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 187 TEIQNARGIMDVLAEMLNALDPNNKE----EVIVDLVDQCRTYKQRVVHLVNSTADESLL 242
+E++ G + V++EML L P E E++ +L CR +QRV+ L+ A+E L
Sbjct: 13 SELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQIANEQLT 72
Query: 243 CQGLQLNDDLQRLLAKHESFASGKSAQTAQ 272
+ L +ND+L + +HE F ++ QT +
Sbjct: 73 EELLIVNDNLNNVFLRHERFERFRTGQTTK 102
>pdb|1JWF|A Chain A, Crystal Structure Of Human Gga1 Vhs Domain.
pdb|1JWG|A Chain A, Vhs Domain Of Human Gga1 Complexed With Cation-independent
M6pr C-terminal Peptide
pdb|1JWG|B Chain B, Vhs Domain Of Human Gga1 Complexed With Cation-independent
M6pr C-terminal Peptide
pdb|1UJJ|A Chain A, Vhs Domain Of Human Gga1 Complexed With C-Terminal Peptide
From Bace
pdb|1UJJ|B Chain B, Vhs Domain Of Human Gga1 Complexed With C-Terminal Peptide
From Bace
pdb|1UJK|A Chain A, Vhs Domain Of Human Gga1 Complexed With C-Terminal
Phosphopeptide From Bace
pdb|1UJK|B Chain B, Vhs Domain Of Human Gga1 Complexed With C-Terminal
Phosphopeptide From Bace
Length = 147
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 2 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTL 61
+ + ++RAT+ + DWA C+ LN D + + +I S + ALT+
Sbjct: 10 LEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALTV 69
Query: 62 LETIIKNCGDIVHMHVAEKNVLHEMVKIARKK-----PDTHVKEKILILIDTW 109
LET +K+CG H V + L+E++K+ K VK KIL L+ +W
Sbjct: 70 LETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSW 122
>pdb|3G2S|A Chain A, Vhs Domain Of Human Gga1 Complexed With Sorla C-Terminal
Peptide
pdb|3G2S|B Chain B, Vhs Domain Of Human Gga1 Complexed With Sorla C-Terminal
Peptide
pdb|3G2T|A Chain A, Vhs Domain Of Human Gga1 Complexed With Sorla C-Terminal
Phosphopeptide
pdb|3G2T|B Chain B, Vhs Domain Of Human Gga1 Complexed With Sorla C-Terminal
Phosphopeptide
pdb|3G2U|A Chain A, Vhs Domain Of Human Gga1 Complexed With Sotilin C-Terminal
Peptide
pdb|3G2U|B Chain B, Vhs Domain Of Human Gga1 Complexed With Sotilin C-Terminal
Peptide
pdb|3G2V|A Chain A, Vhs Domain Of Human Gga1 Complexed With Sotilin C-Terminal
Phosphopeptide
pdb|3G2V|B Chain B, Vhs Domain Of Human Gga1 Complexed With Sotilin C-Terminal
Phosphopeptide
pdb|3G2W|A Chain A, Vhs Domain Of Human Gga1 Complexed With A Dxxll Hinge
Peptide
pdb|3G2W|B Chain B, Vhs Domain Of Human Gga1 Complexed With A Dxxll Hinge
Peptide
Length = 149
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 2 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTL 61
+ + ++RAT+ + DWA C+ LN D + + +I S + ALT+
Sbjct: 12 LEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALTV 71
Query: 62 LETIIKNCGDIVHMHVAEKNVLHEMVKIARKK-----PDTHVKEKILILIDTW 109
LET +K+CG H V + L+E++K+ K VK KIL L+ +W
Sbjct: 72 LETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSW 124
>pdb|1PY1|A Chain A, Complex Of Gga1-Vhs Domain And Beta-Secretase C-Terminal
Phosphopeptide
pdb|1PY1|B Chain B, Complex Of Gga1-Vhs Domain And Beta-Secretase C-Terminal
Phosphopeptide
pdb|1PY1|C Chain C, Complex Of Gga1-Vhs Domain And Beta-Secretase C-Terminal
Phosphopeptide
pdb|1PY1|D Chain D, Complex Of Gga1-Vhs Domain And Beta-Secretase C-Terminal
Phosphopeptide
Length = 158
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 2 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTL 61
+ + ++RAT+ + DWA C+ LN D + + +I S + ALT+
Sbjct: 11 LEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALTV 70
Query: 62 LETIIKNCGDIVHMHVAEKNVLHEMVKIARKK-----PDTHVKEKILILIDTW 109
LET +K+CG H V + L+E++K+ K VK KIL L+ +W
Sbjct: 71 LETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSW 123
>pdb|1LF8|A Chain A, Complex Of Gga3-Vhs Domain And Ci-Mpr C-Terminal
Phosphopeptide
pdb|1LF8|B Chain B, Complex Of Gga3-Vhs Domain And Ci-Mpr C-Terminal
Phosphopeptide
pdb|1LF8|C Chain C, Complex Of Gga3-Vhs Domain And Ci-Mpr C-Terminal
Phosphopeptide
pdb|1LF8|D Chain D, Complex Of Gga3-Vhs Domain And Ci-Mpr C-Terminal
Phosphopeptide
Length = 171
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 2 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTL 61
+ S +++AT+ DW I CD +N + + V+ + +I S L ALT+
Sbjct: 14 LESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQALTV 73
Query: 62 LETIIKNCGDIVHMHVAEKNVLHEMVKIARKK-----PDTHVKEKILILIDTWQEAF 113
LE +KNCG H V + L+E++K+ K VK K++ L+ +W A
Sbjct: 74 LEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMAL 130
>pdb|1JPL|A Chain A, Gga3 Vhs Domain Complexed With C-Terminal Peptide From
Cation-Independent Mannose 6-Phosphate Receptor
pdb|1JPL|B Chain B, Gga3 Vhs Domain Complexed With C-Terminal Peptide From
Cation-Independent Mannose 6-Phosphate Receptor
pdb|1JPL|C Chain C, Gga3 Vhs Domain Complexed With C-Terminal Peptide From
Cation-Independent Mannose 6-Phosphate Receptor
pdb|1JPL|D Chain D, Gga3 Vhs Domain Complexed With C-Terminal Peptide From
Cation-Independent Mannose 6-Phosphate Receptor
pdb|1JUQ|A Chain A, Gga3 Vhs Domain Complexed With C-Terminal Peptide From
Cation-Dependent Mannose 6-Phosphate Receptor
pdb|1JUQ|B Chain B, Gga3 Vhs Domain Complexed With C-Terminal Peptide From
Cation-Dependent Mannose 6-Phosphate Receptor
pdb|1JUQ|C Chain C, Gga3 Vhs Domain Complexed With C-Terminal Peptide From
Cation-Dependent Mannose 6-Phosphate Receptor
pdb|1JUQ|D Chain D, Gga3 Vhs Domain Complexed With C-Terminal Peptide From
Cation-Dependent Mannose 6-Phosphate Receptor
Length = 171
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 2 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTL 61
+ S +++AT+ DW I CD +N + + V+ + +I S L ALT+
Sbjct: 14 LESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQALTV 73
Query: 62 LETIIKNCGDIVHMHVAEKNVLHEMVKIARKK-----PDTHVKEKILILIDTWQEAF 113
LE KNCG H V + L+E++K+ K VK K++ L+ +W A
Sbjct: 74 LEACXKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTXAL 130
>pdb|1MHQ|A Chain A, Crystal Structure Of Human Gga2 Vhs Domain
pdb|1MHQ|B Chain B, Crystal Structure Of Human Gga2 Vhs Domain
Length = 148
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 6 VDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETI 65
+++AT + DW+ C+ +N DP + +I S K L ALT+LE
Sbjct: 6 LNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALTVLEMC 65
Query: 66 IKNCGDIVHMHVAEKNVLHEMVKIARKK-----PDTHVKEKILILIDTWQEAF 113
+ +CG+ H VA+ L+E++K+ K VK +++ ++ +W F
Sbjct: 66 MNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWF 118
>pdb|1YD8|G Chain G, Complex Of Human Gga3 Gat Domain And Ubiquitin
pdb|1YD8|H Chain H, Complex Of Human Gga3 Gat Domain And Ubiquitin
Length = 98
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 185 SLTEIQN-ARGIMDVLAEMLNALDPNNKEEVIVDLVDQCRTYKQRVVHLVNSTAD-ESLL 242
+L E+ N R + ++L + E++ +L DQC ++ + L + T D ++ L
Sbjct: 14 TLEEVNNNVRLLSEMLLHYSQEDSSDGDRELMKELFDQCENKRRTLFKLASETEDNDNSL 73
Query: 243 CQGLQLNDDLQRLLAKHESFASGK 266
LQ +D+L R++ +++ G+
Sbjct: 74 GDILQASDNLSRVINSYKTIIEGQ 97
>pdb|1WR6|A Chain A, Crystal Structure Of Gga3 Gat Domain In Complex With
Ubiquitin
pdb|1WR6|B Chain B, Crystal Structure Of Gga3 Gat Domain In Complex With
Ubiquitin
pdb|1WR6|C Chain C, Crystal Structure Of Gga3 Gat Domain In Complex With
Ubiquitin
pdb|1WR6|D Chain D, Crystal Structure Of Gga3 Gat Domain In Complex With
Ubiquitin
Length = 111
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 185 SLTEIQN-ARGIMDVLAEMLNALDPNNKEEVIVDLVDQCRTYKQRVVHLVNSTAD-ESLL 242
+L E+ N R + + L + E+ +L DQC ++ + L + T D ++ L
Sbjct: 9 TLEEVNNNVRLLSEXLLHYSQEDSSDGDRELXKELFDQCENKRRTLFKLASETEDNDNSL 68
Query: 243 CQGLQLNDDLQRLLAKHESFASGK--SAQTAQTDKPKTESKS 282
LQ +D+L R++ +++ G+ + + A P +E S
Sbjct: 69 GDILQASDNLSRVINSYKTIIEGQVINGEVATLTLPDSEGNS 110
>pdb|1TXD|A Chain A, Crystal Structure Of The Dh/ph Domains Of
Leukemia-associated Rhogef
pdb|1X86|A Chain A, Crystal Structure Of The DhPH DOMAINS OF
LEUKEMIA-Associated Rhogef In Complex With Rhoa
pdb|1X86|C Chain C, Crystal Structure Of The DhPH DOMAINS OF
LEUKEMIA-Associated Rhogef In Complex With Rhoa
pdb|1X86|E Chain E, Crystal Structure Of The DhPH DOMAINS OF
LEUKEMIA-Associated Rhogef In Complex With Rhoa
pdb|1X86|G Chain G, Crystal Structure Of The DhPH DOMAINS OF
LEUKEMIA-Associated Rhogef In Complex With Rhoa
Length = 385
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 50 RNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTW 109
R S+ +L+ + L I N DI+ +H+ L+E +K RK+ +T V ++I + TW
Sbjct: 53 RVSREGILSPSELRKIFSNLEDILQLHIG----LNEQMKAVRKRNETSVIDQIGEDLLTW 108
Query: 110 QEAFGG 115
F G
Sbjct: 109 ---FSG 111
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.312 0.129 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,253,484
Number of Sequences: 62578
Number of extensions: 759527
Number of successful extensions: 1204
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1185
Number of HSP's gapped (non-prelim): 19
length of query: 672
length of database: 14,973,337
effective HSP length: 105
effective length of query: 567
effective length of database: 8,402,647
effective search space: 4764300849
effective search space used: 4764300849
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)