BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005884
(672 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P24044|CALM_PLAFA Calmodulin OS=Plasmodium falciparum PE=3 SV=4
Length = 149
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Query: 604 KELLQAFRFFDRNQVGYIRVEDLRLIIHNLGKFLSHRDVKELVQSALLESNTGRDDRILY 663
+EL++AFR FDR+ GYI ++LR ++ NLG+ L++ +V E+++ E++ D +I Y
Sbjct: 84 EELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIR----EADIDGDGQINY 139
Query: 664 NKLVRM 669
+ V+M
Sbjct: 140 EEFVKM 145
>sp|P62203|CALM_PLAF7 Calmodulin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0323 PE=3
SV=2
Length = 149
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Query: 604 KELLQAFRFFDRNQVGYIRVEDLRLIIHNLGKFLSHRDVKELVQSALLESNTGRDDRILY 663
+EL++AFR FDR+ GYI ++LR ++ NLG+ L++ +V E+++ E++ D +I Y
Sbjct: 84 EELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIR----EADIDGDGQINY 139
Query: 664 NKLVRM 669
+ V+M
Sbjct: 140 EEFVKM 145
>sp|Q8IX12|CCAR1_HUMAN Cell division cycle and apoptosis regulator protein 1 OS=Homo
sapiens GN=CCAR1 PE=1 SV=2
Length = 1150
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 356 PRHPGLILQM-KSNKDSKLRSLSLSLDSLLDYTDKDIEESSFELSLFGEMLYEMLQYQMG 414
P P +I+ + K K +SL LLDY +D +E SFE+SLF E+ EMLQ G
Sbjct: 724 PDEPAIIVHPNWAAKSGKFDCSIMSLSVLLDYRLEDNKEHSFEVSLFAELFNEMLQRDFG 783
Query: 415 CRVLEFLQGL 424
R+ + L L
Sbjct: 784 VRIYKSLLSL 793
>sp|Q641G3|CCAR1_XENLA Cell division cycle and apoptosis regulator protein 1 OS=Xenopus
laevis GN=ccar1 PE=2 SV=1
Length = 1157
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 603 DKELLQAFRFFDRNQVGYIRVEDLRLIIHNLGKFLSHRDVKELVQSALLESNTGRDDRIL 662
+++LL AF +FD++ GY+ +DL I++ LG LS VK+L LL+ + +L
Sbjct: 932 NRDLLMAFVYFDQSHCGYLLEKDLEEILYTLGLHLSRAQVKKLFTKILLK------ESLL 985
Query: 663 YNKL 666
Y KL
Sbjct: 986 YRKL 989
>sp|Q5R8S0|K1967_PONAB DBIRD complex subunit KIAA1967 homolog OS=Pongo abelii PE=2 SV=1
Length = 918
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 114/277 (41%), Gaps = 52/277 (18%)
Query: 392 EESSFELSLFGEMLYEMLQYQMGCRVLEFLQGLRIKFLSERNERKRQRSEVQEKENDK-- 449
E SFE+ + E+ EMLQ G RV + L L K +S K + ++ +E ++
Sbjct: 531 ERISFEVMVLAELFLEMLQRDFGYRVYKMLLSLPEKVVSPPEPEKEEAAKEEEAIKEEVV 590
Query: 450 KSPKRSKIDELPATIKSTTPETMNSAQPDDKTTVVKEDTLVDHVNEAKVEEQKLKSKPNE 509
K PK +E PAT +S P +KED L L P+
Sbjct: 591 KEPKDEAQNEGPAT-ESEAP--------------LKEDGL-------------LPKPPSS 622
Query: 510 ETEDEEDPEEYPEEDEEMGDASSQPNSSNGNDEEEGKTDANAQSGMESGNEKDKA-NESN 568
E+EE P E E++ + + P D+ E + A + +E + A N+S
Sbjct: 623 GGEEEEKPRG--EASEDLCEMALDPELLLLRDDGE---EEFAGAKLEDSEVRSVASNQSE 677
Query: 569 KEKTIMEAAEVKHSDVDMGKKGERNVETGKKEVFDKELLQAFRFFDRNQVGYIRVEDLRL 628
E + ++ DM K E V + L AF FFD N GY+ DL
Sbjct: 678 MEFSSLQ---------DMPK------ELDPSAVLPLDCLLAFVFFDANWCGYLHRRDLER 722
Query: 629 IIHNLGKFLSHRDVKELVQSALLESNTGRDDRILYNK 665
I+ LG LS K+LV S ++ N + + Y++
Sbjct: 723 ILLTLGIRLSAEQAKQLV-SRVVTQNICQYRSLQYSR 758
>sp|Q8N163|K1967_HUMAN DBIRD complex subunit KIAA1967 OS=Homo sapiens GN=KIAA1967 PE=1
SV=2
Length = 923
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 112/283 (39%), Gaps = 59/283 (20%)
Query: 392 EESSFELSLFGEMLYEMLQYQMGCRVLEFLQGLRIKFLSERNERKRQRSEVQE------- 444
E SFE+ + E+ EMLQ G RV + L L K +S K + ++ +
Sbjct: 531 ERISFEVMVLAELFLEMLQRDFGYRVYKMLLSLPEKVVSPPEPEKEEAAKEEATKEEEAI 590
Query: 445 KENDKKSPKRSKIDELPATIKSTTPETMNSAQPDDKTTVVKEDTLVDHVNEAKVEEQKLK 504
KE K PK +E PAT +EA ++E L
Sbjct: 591 KEEVVKEPKDEAQNEGPAT-----------------------------ESEAPLKEDGLL 621
Query: 505 SKP-NEETEDEEDPEEYPEEDEEMGDASSQPNSSNGNDEEEGKTDANAQSGMESGNEKDK 563
KP + E+EE P E E++ + + P D+ E + A + +E +
Sbjct: 622 PKPLSSGGEEEEKPRG--EASEDLCEMALDPELLLLRDDGE---EEFAGAKLEDSEVRSV 676
Query: 564 A-NESNKEKTIMEAAEVKHSDVDMGKKGERNVETGKKEVFDKELLQAFRFFDRNQVGYIR 622
A N+S E + ++ DM K E V + L AF FFD N GY+
Sbjct: 677 ASNQSEMEFSSLQ---------DMPK------ELDPSAVLPLDCLLAFVFFDANWCGYLH 721
Query: 623 VEDLRLIIHNLGKFLSHRDVKELVQSALLESNTGRDDRILYNK 665
DL I+ LG LS K+LV S ++ N + + Y++
Sbjct: 722 RRDLERILLTLGIRLSAEQAKQLV-SRVVTQNICQYRSLQYSR 763
>sp|Q8CH18|CCAR1_MOUSE Cell division cycle and apoptosis regulator protein 1 OS=Mus
musculus GN=Ccar1 PE=1 SV=1
Length = 1146
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 31/103 (30%)
Query: 564 ANESNKEKTIMEAAEVKHSDVDMGKKGERNVETGKKEVFDKELLQAFRFFDRNQVGYIRV 623
A + KEK M +++LL AF +FD++ GY+
Sbjct: 904 AKDKEKEKPQMVTV-------------------------NRDLLMAFVYFDQSHCGYLLE 938
Query: 624 EDLRLIIHNLGKFLSHRDVKELVQSALLESNTGRDDRILYNKL 666
+DL I++ LG LS VK+L+ +L + Y KL
Sbjct: 939 KDLEEILYTLGLHLSRAQVKKLLNKVVLRESC------FYRKL 975
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.302 0.123 0.319
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 252,900,634
Number of Sequences: 539616
Number of extensions: 11798169
Number of successful extensions: 91998
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 3093
Number of HSP's that attempted gapping in prelim test: 55606
Number of HSP's gapped (non-prelim): 22518
length of query: 672
length of database: 191,569,459
effective HSP length: 124
effective length of query: 548
effective length of database: 124,657,075
effective search space: 68312077100
effective search space used: 68312077100
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 65 (29.6 bits)