Citrus Sinensis ID: 005892

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-

MAKGEECCSTQLIDGDGTFNVSGIEHFIKEVKLSDCGLSYAVVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLIMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHMETPLSEFFNVEVVALSSFEEKEELFKEQVASLRQRFYHSVAPGGLAGDRRGVVPASGFSFSAHEIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYSSFAANEEWCELEAAVQSGPISSFGKKLSSILETCLSGYDGEVLYFDEGVRSAKRKQLEDKLLQLVQPAFQSMLGHIRSGTLDKFKDAFDKALSGGEGFSSAAHHCSKFYMNLFDEACADAVIEQANWDMSKARDKFQRDIDAHIASVRAAKLGELTAIFEAKLNESLSGPVEALLDGANNETWPAIRKLLRCETESAISGFSDALYGFDMDEETKEKMLASLENYAKGVVEAKAREESGRVLMRMKDRFTSLFSHDSDSMPRVWTGKEDIRGITKLARSASLKLLSVMAAIRLDDETDNIESTLTLALVDSPSNAATNRSITNHDPLASSTWEQVPSSKTLITPVQCKSLWRQFKSETEYSVTQAISAQA

ccccccccccEEECcccccccccHHHHHHHcccccccccEEEEEEEccccccHHHHHHHHHccccccccccccccccccEEEEECccccccCEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHccHHHHHHHHHHHHHHcccccccEEEEEEcccccccccccHHHHHHHHHHHHccccccccccccccccccccHHccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHc

******C*STQLIDGDGTFNVSGIEHFIKEVKLSDCGLSYAVVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLIMDLEGT************EKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVP******ETPLSEFFNVEVVALSSFEEKEELFKEQVASLRQRFYHSVAPGGLAGDRRGVVPASGFSFSAHEIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYSSFAANEEWCELEAAVQSGPISSFGKKLSSILETCLSGYDGEVLYFDEGVRSAKRKQLEDKLLQLVQPAFQSMLGHIRSGTLDKFKDAFDKALSGGEGFSSAAHHCSKFYMNLFDEACADAVIEQANWDMSKARDKFQRDIDAHIASVRAAKLGELTAIFEAKLNESLSGPVEALLDGANNETWPAIRKLLRCETESAISGFSDALYGFDMDEETKEKMLASLENYAKGVVEAKAREESGRVLMRMKDRFTSLFSHDSDSMPRVWTGKEDIRGITKLARSASLKLLSVMAAIRLDDETDNIESTLTLALV**********************WEQVPSSKTLITPVQCKSLWRQFKSETEYSVTQAISA**

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MAKGEECCSTQLIDGDGTFNVSGIEHFIKEVKLSDCGLSYAVVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLIMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHMETPLSEFFNVEVVAxxxxxxxxxxxxxxxxxxxxxFYHSVAPGGLAGDRRGVVPASGFSFSAHEIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYSSFAANEEWCELEAAVQSGPISSFGKKLSSILETCLSGYDGEVLYFDEGVRSAKRKQLEDKLLQLVQPAFQSMLGHIRSGTLDKFKDAFDKALSGGEGFSSAAHHCSKFYMNLFDEACADAVIEQANWDMSKARDKFQRDIDAHIASVRAAKLGELTAIFEAKLNESLSGPVEALLDGANNETWPAIRKLLRCETESAISGFSDALYGFDMDEETKEKMLASLENYAKGVVEAKAREESGRVLMRMKDRFTSLFSHDSDSMPRVWTGKEDIRGITKLARSASLKLLSVMAAIRLDDETDNIESTLTLALVDSPSNAATNRSITNHDPLASSTWEQVPSSKTLITPVQCKSLWRQFKSETEYSVTQAISAQA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Protein ROOT HAIR DEFECTIVE 3 homolog 1	Probable GTP-binding protein that may be involved in cell development.	confident	Q9SSN0
Protein ROOT HAIR DEFECTIVE 3	Probable GTP-binding protein that may be involved in cell development.	confident	Q0JLS6
Protein ROOT HAIR DEFECTIVE 3	Probable GTP-binding protein involved in cell wall expansion. Required for appropriate root and root hair cells enlargement. May inhibit vacuole enlargement during root hair cell expansion. Plays a role in cell wall biosynthesis and actin organization. Seems to act independently from auxin and ethylene pathways. May regulate membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER).	probable	P93042

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3Q5D, chain A
Confidence level:confident
Coverage over the Query: 9-369
View the alignment between query and template
View the model in PyMOL

Template: 1F5N, chain A
Confidence level:confident
Coverage over the Query: 38-394
View the alignment between query and template
View the model in PyMOL